Query 017012
Match_columns 379
No_of_seqs 118 out of 295
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 04:50:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017012.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017012hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00769 AAA ADP/ATP carrier 100.0 5.9E-60 1.3E-64 483.9 32.0 313 22-378 1-332 (472)
2 PF03219 TLC: TLC ATP/ADP tran 100.0 2.5E-57 5.4E-62 466.6 30.4 328 8-378 4-348 (491)
3 COG3202 ATP/ADP translocase [E 100.0 1.7E-55 3.7E-60 443.5 31.0 332 5-378 4-351 (509)
4 PRK11195 lysophospholipid tran 99.4 1E-09 2.2E-14 110.3 28.9 262 30-377 5-269 (393)
5 TIGR00900 2A0121 H+ Antiporter 99.4 1.3E-09 2.7E-14 105.4 28.4 265 35-377 6-275 (365)
6 PF07690 MFS_1: Major Facilita 99.3 1.9E-09 4.1E-14 103.8 23.5 160 34-241 2-166 (352)
7 TIGR00710 efflux_Bcr_CflA drug 99.2 2.5E-08 5.5E-13 97.7 29.5 143 36-226 13-158 (385)
8 PRK03545 putative arabinose tr 99.2 3.7E-08 7.9E-13 98.2 31.0 157 29-233 10-170 (390)
9 PRK10054 putative transporter; 99.2 1.2E-08 2.6E-13 102.6 26.4 168 24-239 3-174 (395)
10 PRK15402 multidrug efflux syst 99.2 5.1E-08 1.1E-12 97.5 29.6 149 30-226 15-166 (406)
11 PRK09874 drug efflux system pr 99.2 9.3E-08 2E-12 94.9 30.9 152 26-226 11-171 (408)
12 TIGR00893 2A0114 d-galactonate 99.2 1.7E-08 3.8E-13 97.7 24.6 250 60-377 28-279 (399)
13 TIGR00882 2A0105 oligosacchari 99.1 4.2E-08 9E-13 98.0 26.1 275 30-377 4-282 (396)
14 PRK09528 lacY galactoside perm 99.1 2.5E-08 5.3E-13 100.5 23.1 278 25-377 7-290 (420)
15 PRK11652 emrD multidrug resist 99.1 2.7E-07 5.8E-12 91.9 29.7 149 30-226 10-161 (394)
16 PRK10473 multidrug efflux syst 99.1 3E-07 6.6E-12 91.4 30.0 149 30-226 5-156 (392)
17 PRK11902 ampG muropeptide tran 99.1 2.4E-07 5.2E-12 92.9 28.7 250 43-377 14-274 (402)
18 PRK11102 bicyclomycin/multidru 99.1 2.7E-07 5.8E-12 90.8 28.3 130 49-226 12-144 (377)
19 PRK10504 putative transporter; 99.1 3.3E-07 7.1E-12 93.5 29.9 159 25-231 7-169 (471)
20 TIGR00881 2A0104 phosphoglycer 99.0 3.2E-08 6.9E-13 95.9 21.4 248 60-376 29-279 (379)
21 PF05977 MFS_3: Transmembrane 99.0 3.2E-07 6.9E-12 96.4 29.6 231 66-377 50-282 (524)
22 PRK11646 multidrug resistance 99.0 5.1E-07 1.1E-11 90.9 29.8 157 31-235 13-173 (400)
23 PRK11010 ampG muropeptide tran 99.0 4.8E-07 1.1E-11 93.9 29.7 271 22-377 6-287 (491)
24 TIGR00901 2A0125 AmpG-related 99.0 2.8E-07 6.1E-12 90.3 26.4 169 171-377 92-273 (356)
25 PRK11663 regulatory protein Uh 99.0 6.7E-07 1.5E-11 90.9 29.0 124 62-233 59-184 (434)
26 PRK10213 nepI ribonucleoside t 99.0 1.3E-06 2.9E-11 87.7 30.8 148 38-233 30-181 (394)
27 PRK10489 enterobactin exporter 99.0 2E-07 4.4E-12 93.7 24.7 260 34-376 23-286 (417)
28 TIGR00891 2A0112 putative sial 99.0 6.5E-07 1.4E-11 88.0 27.5 155 23-225 7-164 (405)
29 PRK06814 acylglycerophosphoeth 99.0 2.8E-07 6.2E-12 104.4 28.0 267 29-376 12-288 (1140)
30 TIGR00897 2A0118 polyol permea 99.0 1.2E-06 2.5E-11 88.1 28.9 154 28-225 13-170 (402)
31 PRK14995 methyl viologen resis 98.9 1.6E-06 3.4E-11 89.9 30.3 157 29-233 7-168 (495)
32 PRK08633 2-acyl-glycerophospho 98.9 6.6E-07 1.4E-11 101.0 29.4 231 69-377 55-297 (1146)
33 PRK11128 putative 3-phenylprop 98.9 5.3E-07 1.1E-11 89.8 25.6 260 29-377 5-268 (382)
34 PRK15403 multidrug efflux syst 98.9 1.5E-06 3.3E-11 87.9 28.9 152 40-239 28-183 (413)
35 TIGR00711 efflux_EmrB drug res 98.9 9.2E-07 2E-11 90.0 26.7 154 30-231 4-161 (485)
36 TIGR00895 2A0115 benzoate tran 98.9 6.5E-07 1.4E-11 87.5 24.6 152 27-226 16-170 (398)
37 TIGR00902 2A0127 phenyl propri 98.9 1.5E-06 3.2E-11 86.7 27.3 260 30-378 6-269 (382)
38 TIGR00886 2A0108 nitrite extru 98.9 2.6E-06 5.6E-11 83.1 28.3 142 33-222 6-150 (366)
39 KOG2615 Permease of the major 98.9 2.9E-08 6.2E-13 99.1 14.2 135 38-223 43-181 (451)
40 PRK10091 MFS transport protein 98.9 2.7E-06 5.9E-11 84.7 28.4 156 30-233 5-164 (382)
41 PRK11273 glpT sn-glycerol-3-ph 98.9 1.6E-06 3.5E-11 88.5 27.2 116 60-219 62-178 (452)
42 TIGR00712 glpT glycerol-3-phos 98.9 1.5E-06 3.2E-11 88.4 26.2 120 58-221 58-177 (438)
43 PRK12307 putative sialic acid 98.9 3.4E-06 7.3E-11 84.6 28.2 151 28-226 18-171 (426)
44 COG2814 AraJ Arabinose efflux 98.8 6.4E-06 1.4E-10 83.4 29.4 261 23-375 8-273 (394)
45 TIGR00899 2A0120 sugar efflux 98.8 4.5E-06 9.8E-11 81.6 27.5 159 35-241 4-170 (375)
46 PF01306 LacY_symp: LacY proto 98.8 3.3E-06 7.2E-11 86.0 27.0 275 23-377 2-287 (412)
47 PRK11551 putative 3-hydroxyphe 98.8 4.7E-06 1E-10 83.0 27.4 116 59-222 48-163 (406)
48 TIGR00890 2A0111 Oxalate/Forma 98.8 4.3E-06 9.3E-11 80.9 26.5 139 46-235 25-165 (377)
49 cd06174 MFS The Major Facilita 98.8 3.3E-06 7.3E-11 80.6 25.1 143 33-223 4-148 (352)
50 PRK11043 putative transporter; 98.8 1.2E-05 2.6E-10 80.1 29.8 143 36-226 14-159 (401)
51 PRK09556 uhpT sugar phosphate 98.8 3.9E-06 8.4E-11 86.1 25.8 120 60-222 63-182 (467)
52 PRK12382 putative transporter; 98.8 1.1E-05 2.4E-10 80.2 27.7 157 30-226 17-177 (392)
53 PRK03633 putative MFS family t 98.7 6.1E-06 1.3E-10 82.0 25.7 146 30-223 8-155 (381)
54 PLN00028 nitrate transmembrane 98.7 2.1E-05 4.5E-10 81.3 30.2 154 18-221 26-182 (476)
55 PRK05122 major facilitator sup 98.7 8.4E-06 1.8E-10 81.1 25.5 159 27-226 14-177 (399)
56 TIGR00792 gph sugar (Glycoside 98.7 2.4E-06 5.3E-11 85.8 20.8 250 47-377 23-285 (437)
57 TIGR02332 HpaX 4-hydroxyphenyl 98.7 1E-05 2.2E-10 81.9 25.3 115 60-222 42-156 (412)
58 PRK03699 putative transporter; 98.7 2.9E-05 6.3E-10 77.6 28.2 147 28-222 7-155 (394)
59 PRK10133 L-fucose transporter; 98.7 7.8E-05 1.7E-09 76.3 31.4 147 29-221 27-176 (438)
60 TIGR01301 GPH_sucrose GPH fami 98.6 2.9E-05 6.2E-10 80.9 28.0 165 28-221 4-175 (477)
61 TIGR00894 2A0114euk Na(+)-depe 98.6 1.1E-05 2.5E-10 82.3 24.6 113 65-223 80-192 (465)
62 TIGR00892 2A0113 monocarboxyla 98.6 2.8E-05 6.1E-10 79.8 27.4 133 60-240 53-187 (455)
63 TIGR00885 fucP L-fucose:H+ sym 98.6 0.00016 3.5E-09 73.4 30.8 149 29-222 4-154 (410)
64 PRK09705 cynX putative cyanate 98.6 2.8E-05 6E-10 78.0 24.8 114 60-222 43-156 (393)
65 PRK03893 putative sialic acid 98.5 9.1E-05 2E-09 75.9 28.1 154 25-226 17-173 (496)
66 TIGR00903 2A0129 major facilit 98.5 9.2E-05 2E-09 74.2 27.1 127 49-226 16-143 (368)
67 PRK15011 sugar efflux transpor 98.5 0.00019 4.1E-09 71.9 29.3 157 30-234 17-181 (393)
68 TIGR00805 oat sodium-independe 98.5 9.8E-06 2.1E-10 87.1 20.8 290 60-377 67-395 (633)
69 PRK10429 melibiose:sodium symp 98.5 2.7E-05 5.9E-10 80.2 23.1 250 52-377 35-294 (473)
70 TIGR00883 2A0106 metabolite-pr 98.5 1.6E-05 3.4E-10 77.5 20.3 112 71-222 45-156 (394)
71 TIGR00889 2A0110 nucleoside tr 98.5 4.1E-05 8.8E-10 77.8 23.5 69 30-100 4-76 (418)
72 TIGR00896 CynX cyanate transpo 98.5 5.4E-05 1.2E-09 74.2 23.5 128 45-222 17-146 (355)
73 TIGR02718 sider_RhtX_FptX side 98.5 0.00034 7.4E-09 69.7 29.4 258 30-377 3-272 (390)
74 PRK09669 putative symporter Ya 98.5 5.1E-05 1.1E-09 77.2 23.6 130 51-222 37-170 (444)
75 TIGR00879 SP MFS transporter, 98.4 3.8E-05 8.3E-10 76.5 21.7 114 60-218 70-183 (481)
76 TIGR00898 2A0119 cation transp 98.4 4.6E-06 1E-10 85.8 15.2 114 62-223 128-241 (505)
77 PRK11462 putative transporter; 98.4 0.00043 9.3E-09 71.4 28.8 129 52-222 38-170 (460)
78 PRK10406 alpha-ketoglutarate t 98.4 0.00034 7.3E-09 71.0 26.7 113 67-222 69-184 (432)
79 PRK15075 citrate-proton sympor 98.3 0.00026 5.7E-09 71.8 25.4 158 21-222 6-177 (434)
80 PRK15034 nitrate/nitrite trans 98.3 0.0015 3.2E-08 67.9 29.7 147 30-220 36-185 (462)
81 PRK10642 proline/glycine betai 98.3 0.00066 1.4E-08 70.3 26.8 115 68-222 64-178 (490)
82 PRK09584 tppB putative tripept 98.3 0.00053 1.2E-08 71.5 26.0 165 29-240 22-194 (500)
83 TIGR01299 synapt_SV2 synaptic 98.2 7.6E-05 1.7E-09 81.6 19.4 124 71-242 605-729 (742)
84 PRK10207 dipeptide/tripeptide 98.2 7.3E-05 1.6E-09 77.9 18.0 163 27-236 13-183 (489)
85 KOG2325 Predicted transporter/ 98.2 0.00035 7.6E-09 72.6 22.5 156 21-222 27-189 (488)
86 TIGR00924 yjdL_sub1_fam amino 98.2 0.00071 1.5E-08 70.1 24.5 164 30-241 12-186 (475)
87 PRK09952 shikimate transporter 98.2 0.0011 2.5E-08 67.5 25.5 114 69-222 72-185 (438)
88 PF13347 MFS_2: MFS/sugar tran 98.1 5.5E-05 1.2E-09 76.7 15.0 236 65-377 41-288 (428)
89 TIGR00880 2_A_01_02 Multidrug 98.1 0.00019 4.2E-09 59.0 15.3 104 71-222 8-111 (141)
90 PRK11551 putative 3-hydroxyphe 98.1 0.00019 4.2E-09 71.4 17.5 136 61-244 255-393 (406)
91 PRK15462 dipeptide/tripeptide 98.1 0.0033 7.2E-08 65.8 27.2 171 25-242 6-184 (493)
92 PF03825 Nuc_H_symport: Nucleo 98.1 0.0023 5.1E-08 65.1 25.5 67 32-100 6-75 (400)
93 TIGR01299 synapt_SV2 synaptic 98.1 0.00035 7.7E-09 76.5 20.4 115 60-222 201-315 (742)
94 PRK03893 putative sialic acid 98.0 0.00027 5.8E-09 72.4 17.4 122 59-226 309-431 (496)
95 PRK09848 glucuronide transport 98.0 0.00093 2E-08 68.0 21.3 77 297-377 216-292 (448)
96 PRK10489 enterobactin exporter 98.0 0.0014 3E-08 65.9 21.7 135 60-242 258-395 (417)
97 TIGR00806 rfc RFC reduced fola 97.9 0.011 2.4E-07 61.7 27.6 265 39-366 30-316 (511)
98 PRK10077 xylE D-xylose transpo 97.9 0.0011 2.4E-08 67.5 20.3 125 62-222 56-180 (479)
99 PRK05122 major facilitator sup 97.9 0.0013 2.9E-08 65.3 20.3 129 69-245 257-387 (399)
100 TIGR00890 2A0111 Oxalate/Forma 97.9 0.00026 5.7E-09 68.4 14.5 127 63-235 242-370 (377)
101 TIGR00883 2A0106 metabolite-pr 97.9 0.00026 5.6E-09 68.9 14.2 152 30-225 221-377 (394)
102 KOG2816 Predicted transporter 97.9 0.00019 4.2E-09 74.5 13.7 125 71-246 72-198 (463)
103 KOG1330 Sugar transporter/spin 97.9 6E-05 1.3E-09 77.3 9.7 228 71-374 78-312 (493)
104 cd06174 MFS The Major Facilita 97.8 0.00067 1.5E-08 64.6 15.8 166 28-241 175-346 (352)
105 TIGR00893 2A0114 d-galactonate 97.8 0.00094 2E-08 64.5 15.5 154 29-225 216-375 (399)
106 COG2211 MelB Na+/melibiose sym 97.8 0.0064 1.4E-07 63.1 22.2 253 45-377 34-300 (467)
107 PRK09874 drug efflux system pr 97.7 0.0029 6.2E-08 62.7 18.4 65 179-243 328-394 (408)
108 TIGR00879 SP MFS transporter, 97.7 0.00091 2E-08 66.6 14.7 123 67-226 325-448 (481)
109 TIGR00899 2A0120 sugar efflux 97.7 0.004 8.7E-08 60.7 18.9 61 181-242 307-369 (375)
110 TIGR00898 2A0119 cation transp 97.7 0.003 6.5E-08 65.0 18.7 108 71-225 365-472 (505)
111 PF05631 DUF791: Protein of un 97.7 0.009 2E-07 59.8 20.8 227 28-337 33-272 (354)
112 PRK12307 putative sialic acid 97.6 0.0021 4.6E-08 64.4 16.4 46 180-225 339-385 (426)
113 PRK15011 sugar efflux transpor 97.6 0.0085 1.8E-07 59.9 20.7 60 182-242 325-386 (393)
114 TIGR00895 2A0115 benzoate tran 97.6 0.0028 6E-08 61.8 16.7 46 176-221 352-397 (398)
115 PRK09705 cynX putative cyanate 97.6 0.0049 1.1E-07 61.8 18.5 148 30-226 207-358 (393)
116 TIGR00887 2A0109 phosphate:H+ 97.6 0.068 1.5E-06 55.4 27.6 115 65-221 60-174 (502)
117 PRK12382 putative transporter; 97.6 0.0046 9.9E-08 61.4 18.1 124 71-242 259-384 (392)
118 PRK09528 lacY galactoside perm 97.6 0.0017 3.6E-08 65.5 15.1 118 61-226 262-381 (420)
119 PRK10077 xylE D-xylose transpo 97.6 0.004 8.8E-08 63.3 17.7 111 69-222 314-424 (479)
120 PRK09952 shikimate transporter 97.6 0.011 2.5E-07 60.1 20.8 47 177-223 358-405 (438)
121 PRK11902 ampG muropeptide tran 97.5 0.011 2.5E-07 59.1 20.2 149 60-252 244-395 (402)
122 PRK10406 alpha-ketoglutarate t 97.5 0.01 2.2E-07 60.2 19.5 63 180-242 354-419 (432)
123 PRK11010 ampG muropeptide tran 97.5 0.016 3.5E-07 60.3 21.2 144 59-246 256-402 (491)
124 PRK03699 putative transporter; 97.5 0.0075 1.6E-07 60.2 17.9 149 29-226 206-358 (394)
125 KOG2533 Permease of the major 97.5 0.019 4.2E-07 60.2 21.3 180 173-371 145-335 (495)
126 TIGR00889 2A0110 nucleoside tr 97.5 0.0065 1.4E-07 61.7 17.3 115 64-222 254-369 (418)
127 TIGR00891 2A0112 putative sial 97.4 0.004 8.7E-08 61.1 15.2 119 60-225 273-392 (405)
128 PTZ00207 hypothetical protein; 97.4 0.017 3.7E-07 61.9 20.6 148 48-241 51-200 (591)
129 PRK03633 putative MFS family t 97.4 0.016 3.4E-07 57.6 19.1 114 62-226 236-350 (381)
130 TIGR00900 2A0121 H+ Antiporter 97.4 0.0081 1.8E-07 57.8 16.6 116 60-222 246-361 (365)
131 PF11700 ATG22: Vacuole efflux 97.4 0.019 4.1E-07 60.0 20.1 155 28-223 281-441 (477)
132 TIGR02718 sider_RhtX_FptX side 97.4 0.014 2.9E-07 58.1 18.4 63 179-241 320-385 (390)
133 TIGR00902 2A0127 phenyl propri 97.4 0.025 5.5E-07 56.3 20.2 153 29-230 206-362 (382)
134 PF05977 MFS_3: Transmembrane 97.4 0.021 4.6E-07 60.3 20.4 167 27-243 220-390 (524)
135 KOG2532 Permease of the major 97.4 0.047 1E-06 56.9 22.7 220 65-351 77-300 (466)
136 PRK11273 glpT sn-glycerol-3-ph 97.4 0.01 2.3E-07 60.6 17.6 44 183-226 368-413 (452)
137 TIGR00897 2A0118 polyol permea 97.4 0.03 6.6E-07 56.1 20.5 42 184-226 337-379 (402)
138 TIGR00792 gph sugar (Glycoside 97.3 0.0082 1.8E-07 60.2 16.4 146 29-222 223-378 (437)
139 PRK09556 uhpT sugar phosphate 97.3 0.016 3.5E-07 59.4 18.3 41 183-223 370-411 (467)
140 COG2271 UhpC Sugar phosphate p 97.3 0.11 2.3E-06 53.4 23.5 223 31-323 28-267 (448)
141 PF03209 PUCC: PUCC protein; 97.3 0.21 4.6E-06 51.0 25.6 141 166-341 94-240 (403)
142 KOG3764 Vesicular amine transp 97.3 0.0036 7.9E-08 63.5 12.6 193 63-343 108-304 (464)
143 PRK10642 proline/glycine betai 97.2 0.04 8.8E-07 57.0 20.6 43 180-222 360-402 (490)
144 PRK03545 putative arabinose tr 97.2 0.037 8E-07 55.0 19.5 63 183-246 315-379 (390)
145 COG2223 NarK Nitrate/nitrite t 97.2 0.14 3E-06 52.3 23.3 153 23-222 9-163 (417)
146 PRK11663 regulatory protein Uh 97.1 0.03 6.4E-07 56.9 18.1 45 182-226 357-402 (434)
147 TIGR00892 2A0113 monocarboxyla 97.1 0.0099 2.1E-07 61.0 14.4 48 178-225 349-397 (455)
148 PRK15075 citrate-proton sympor 97.1 0.043 9.3E-07 55.7 18.8 47 179-225 348-396 (434)
149 PF07690 MFS_1: Major Facilita 97.1 0.0068 1.5E-07 58.2 11.8 119 51-215 234-352 (352)
150 PF11700 ATG22: Vacuole efflux 97.0 0.54 1.2E-05 49.1 27.4 87 65-196 74-160 (477)
151 PRK15402 multidrug efflux syst 97.0 0.078 1.7E-06 52.9 19.7 111 68-222 258-368 (406)
152 TIGR00896 CynX cyanate transpo 97.0 0.027 5.9E-07 55.0 16.0 144 30-222 199-346 (355)
153 PRK09669 putative symporter Ya 97.0 0.021 4.5E-07 58.2 15.4 110 66-221 269-385 (444)
154 TIGR00788 fbt folate/biopterin 97.0 0.072 1.6E-06 55.2 19.6 74 299-377 242-316 (468)
155 COG0738 FucP Fucose permease [ 97.0 0.53 1.1E-05 48.1 27.1 145 30-222 15-164 (422)
156 PF13347 MFS_2: MFS/sugar tran 97.0 0.0044 9.6E-08 62.8 10.3 146 28-220 225-380 (428)
157 PRK08633 2-acyl-glycerophospho 96.9 0.058 1.3E-06 61.2 19.9 114 62-223 270-383 (1146)
158 PRK11128 putative 3-phenylprop 96.9 0.13 2.9E-06 51.0 19.9 43 61-105 240-282 (382)
159 TIGR00903 2A0129 major facilit 96.9 0.083 1.8E-06 52.9 18.0 47 176-222 294-340 (368)
160 PRK10504 putative transporter; 96.8 0.1 2.2E-06 53.1 18.9 114 63-221 299-412 (471)
161 TIGR00881 2A0104 phosphoglycer 96.8 0.025 5.4E-07 54.6 13.6 44 179-222 327-370 (379)
162 PLN00028 nitrate transmembrane 96.8 0.016 3.5E-07 59.9 13.0 40 179-219 365-404 (476)
163 PRK10429 melibiose:sodium symp 96.8 0.043 9.4E-07 56.5 15.8 150 28-221 231-390 (473)
164 TIGR00710 efflux_Bcr_CflA drug 96.8 0.18 3.8E-06 49.2 19.1 115 60-218 241-356 (385)
165 PF06609 TRI12: Fungal trichot 96.7 0.22 4.7E-06 53.5 20.8 116 58-222 75-190 (599)
166 PRK09848 glucuronide transport 96.7 0.047 1E-06 55.6 15.3 148 28-221 228-385 (448)
167 TIGR00711 efflux_EmrB drug res 96.7 0.035 7.7E-07 56.4 13.9 116 62-221 292-407 (485)
168 COG2211 MelB Na+/melibiose sym 96.7 0.026 5.6E-07 58.7 12.8 146 30-221 238-393 (467)
169 PRK10091 MFS transport protein 96.6 0.26 5.6E-06 48.9 19.6 46 60-107 234-279 (382)
170 TIGR00887 2A0109 phosphate:H+ 96.6 0.052 1.1E-06 56.3 15.1 43 180-222 410-452 (502)
171 TIGR00882 2A0105 oligosacchari 96.6 0.17 3.8E-06 50.3 17.9 118 61-226 254-373 (396)
172 KOG0569 Permease of the major 96.5 0.12 2.6E-06 54.1 16.7 156 34-227 276-434 (485)
173 PRK06814 acylglycerophosphoeth 96.4 0.14 3.1E-06 58.4 18.4 50 173-222 345-394 (1140)
174 PRK10054 putative transporter; 96.4 0.13 2.8E-06 51.6 16.0 49 182-231 318-368 (395)
175 COG2814 AraJ Arabinose efflux 96.4 0.35 7.5E-06 49.4 18.7 167 30-245 213-384 (394)
176 TIGR02332 HpaX 4-hydroxyphenyl 96.3 0.08 1.7E-06 53.5 13.9 46 180-225 351-397 (412)
177 PRK10473 multidrug efflux syst 96.3 0.85 1.8E-05 45.1 20.7 45 63-109 241-285 (392)
178 TIGR01272 gluP glucose/galacto 96.2 1.1 2.4E-05 43.7 20.8 55 167-222 16-70 (310)
179 PRK11646 multidrug resistance 96.1 0.52 1.1E-05 47.4 18.5 42 182-223 317-358 (400)
180 PRK15034 nitrate/nitrite trans 96.0 0.27 5.9E-06 51.2 16.3 75 29-106 253-329 (462)
181 PRK11043 putative transporter; 95.9 1 2.2E-05 44.7 19.6 119 60-222 237-355 (401)
182 PRK11195 lysophospholipid tran 95.9 1.4 3.1E-05 44.0 20.5 45 181-225 312-357 (393)
183 PRK10213 nepI ribonucleoside t 95.7 1.8 3.8E-05 43.5 20.4 47 186-233 329-377 (394)
184 TIGR00901 2A0125 AmpG-related 95.7 0.29 6.4E-06 47.7 14.5 142 30-208 211-355 (356)
185 PRK11102 bicyclomycin/multidru 95.7 1.3 2.9E-05 43.2 19.1 41 60-102 229-269 (377)
186 KOG3626 Organic anion transpor 95.7 0.19 4.1E-06 54.9 13.8 177 184-377 259-457 (735)
187 TIGR00712 glpT glycerol-3-phos 95.7 0.46 1E-05 48.2 16.0 43 184-226 367-411 (438)
188 PRK14995 methyl viologen resis 95.6 0.52 1.1E-05 48.9 16.4 42 179-220 368-409 (495)
189 TIGR00886 2A0108 nitrite extru 95.6 0.045 9.8E-07 53.2 8.0 101 66-211 266-366 (366)
190 KOG0569 Permease of the major 95.3 1.2 2.6E-05 46.7 17.7 102 71-217 70-171 (485)
191 COG2270 Permeases of the major 95.2 0.51 1.1E-05 48.5 14.1 119 58-224 283-403 (438)
192 PRK11462 putative transporter; 95.1 0.84 1.8E-05 47.1 15.9 108 67-220 269-383 (460)
193 TIGR00788 fbt folate/biopterin 95.0 0.9 2E-05 47.0 15.9 129 58-225 285-415 (468)
194 TIGR00924 yjdL_sub1_fam amino 95.0 1.4 3E-05 45.7 17.3 55 168-222 387-441 (475)
195 TIGR00894 2A0114euk Na(+)-depe 94.9 0.83 1.8E-05 46.5 15.2 42 180-222 379-420 (465)
196 PF03825 Nuc_H_symport: Nucleo 94.9 3.3 7.1E-05 42.2 19.2 108 71-225 253-366 (400)
197 PRK11652 emrD multidrug resist 94.7 3.6 7.9E-05 40.6 18.8 43 179-222 316-358 (394)
198 KOG0255 Synaptic vesicle trans 94.7 0.55 1.2E-05 48.8 13.4 104 71-223 128-231 (521)
199 COG3104 PTR2 Dipeptide/tripept 94.4 4.2 9.1E-05 42.7 18.6 60 185-244 140-203 (498)
200 PF01770 Folate_carrier: Reduc 94.1 8.1 0.00018 39.8 26.8 187 180-372 111-308 (412)
201 KOG0637 Sucrose transporter an 94.1 3.8 8.3E-05 42.7 17.5 167 28-222 32-203 (498)
202 KOG0254 Predicted transporter 94.0 0.88 1.9E-05 47.5 13.2 106 64-217 92-197 (513)
203 KOG2504 Monocarboxylate transp 93.0 1.8 3.9E-05 45.7 13.5 149 28-222 298-448 (509)
204 PF12832 MFS_1_like: MFS_1 lik 92.5 0.5 1.1E-05 36.9 6.4 71 30-102 2-74 (77)
205 PRK10133 L-fucose transporter; 92.3 8.8 0.00019 39.2 17.2 112 63-225 297-409 (438)
206 COG2270 Permeases of the major 92.2 16 0.00035 37.8 22.1 113 43-199 39-152 (438)
207 TIGR01272 gluP glucose/galacto 91.9 11 0.00025 36.5 16.8 52 173-226 241-293 (310)
208 COG2223 NarK Nitrate/nitrite t 91.7 3.2 7E-05 42.6 12.8 76 29-106 219-297 (417)
209 COG0477 ProP Permeases of the 90.5 12 0.00026 33.3 15.4 47 176-222 108-156 (338)
210 PRK09584 tppB putative tripept 90.1 26 0.00057 36.5 23.0 53 168-220 388-440 (500)
211 PF01306 LacY_symp: LacY proto 89.9 26 0.00056 36.1 18.1 149 28-226 220-378 (412)
212 PF03092 BT1: BT1 family; Int 88.9 13 0.00028 38.2 14.9 31 196-226 122-153 (433)
213 PRK15403 multidrug efflux syst 88.8 28 0.00061 35.0 21.0 37 60-98 253-289 (413)
214 PF00083 Sugar_tr: Sugar (and 88.8 0.00047 1E-08 69.8 -17.8 112 65-222 50-162 (451)
215 KOG4686 Predicted sugar transp 88.1 21 0.00045 35.6 14.6 145 29-222 261-412 (459)
216 KOG0254 Predicted transporter 87.6 8.8 0.00019 40.0 12.8 149 26-209 292-442 (513)
217 PF06963 FPN1: Ferroportin1 (F 87.1 41 0.00088 34.9 21.8 76 298-379 248-323 (432)
218 PF03137 OATP: Organic Anion T 85.6 0.25 5.4E-06 52.5 0.0 187 179-378 158-371 (539)
219 COG2807 CynX Cyanate permease 84.3 52 0.0011 33.6 23.6 210 71-375 57-269 (395)
220 PF00083 Sugar_tr: Sugar (and 82.2 0.005 1.1E-07 62.2 -14.0 53 173-225 360-413 (451)
221 KOG0253 Synaptic vesicle trans 81.9 68 0.0015 33.3 15.6 39 62-102 114-152 (528)
222 KOG4332 Predicted sugar transp 81.2 30 0.00065 34.3 12.1 59 35-95 44-104 (454)
223 TIGR00885 fucP L-fucose:H+ sym 81.1 65 0.0014 32.5 18.1 52 170-223 329-380 (410)
224 KOG3762 Predicted transporter 79.9 15 0.00033 39.3 10.4 96 73-220 418-522 (618)
225 KOG2504 Monocarboxylate transp 76.4 1.1E+02 0.0023 32.4 22.8 63 33-99 48-117 (509)
226 PRK15462 dipeptide/tripeptide 74.7 1.2E+02 0.0026 32.0 18.3 46 177-222 392-438 (493)
227 PRK10207 dipeptide/tripeptide 73.6 1.2E+02 0.0026 31.6 18.7 54 168-221 385-438 (489)
228 KOG0253 Synaptic vesicle trans 73.4 16 0.00036 37.6 8.2 174 22-245 320-517 (528)
229 PRK03612 spermidine synthase; 72.7 1.3E+02 0.0029 31.8 19.4 32 195-226 142-175 (521)
230 KOG0255 Synaptic vesicle trans 66.9 1.6E+02 0.0035 30.4 18.5 98 82-224 371-468 (521)
231 TIGR00926 2A1704 Peptide:H+ sy 62.9 1.5E+02 0.0032 32.5 13.6 66 179-244 102-179 (654)
232 KOG2532 Permease of the major 60.4 1.3E+02 0.0029 31.4 12.3 73 167-241 363-441 (466)
233 PF05978 UNC-93: Ion channel r 58.8 1.3E+02 0.0028 26.6 13.5 46 173-218 96-145 (156)
234 PRK10263 DNA translocase FtsK; 55.4 3.3E+02 0.0071 32.5 15.0 13 210-222 143-155 (1355)
235 PF13150 DUF3989: Protein of u 50.7 24 0.00052 28.2 3.8 44 10-53 9-53 (85)
236 PRK10983 putative inner membra 50.0 55 0.0012 33.1 7.3 50 31-95 15-64 (368)
237 KOG3098 Uncharacterized conser 46.4 3.7E+02 0.0081 28.2 15.2 46 177-222 257-303 (461)
238 PF03092 BT1: BT1 family; Int 43.1 3.8E+02 0.0083 27.4 12.5 50 173-222 329-378 (433)
239 KOG3810 Micronutrient transpor 40.7 3.5E+02 0.0075 27.9 11.0 43 182-224 114-156 (433)
240 PF05360 YiaAB: yiaA/B two hel 40.3 41 0.00088 24.3 3.3 35 18-52 19-53 (53)
241 PF02313 Fumarate_red_D: Fumar 39.0 45 0.00097 28.3 3.9 33 189-221 3-35 (118)
242 KOG2816 Predicted transporter 38.1 3E+02 0.0065 28.8 10.7 112 58-221 274-389 (463)
243 PF00854 PTR2: POT family; In 37.1 65 0.0014 31.8 5.5 61 182-242 53-118 (372)
244 TIGR02871 spore_ylbJ sporulati 28.8 4.7E+02 0.01 26.6 9.9 49 172-221 87-135 (362)
245 KOG3626 Organic anion transpor 25.6 8E+02 0.017 27.4 11.7 61 156-221 389-456 (735)
246 TIGR00328 flhB flagellar biosy 25.5 6.8E+02 0.015 25.2 10.4 59 295-353 120-182 (347)
247 PRK12468 flhB flagellar biosyn 24.4 7.2E+02 0.016 25.5 10.5 58 295-352 127-188 (386)
248 COG0628 yhhT Predicted permeas 23.7 4.4E+02 0.0095 26.0 8.8 31 71-103 44-75 (355)
249 PF04341 DUF485: Protein of un 23.4 2.9E+02 0.0063 22.0 6.1 63 28-92 16-83 (91)
250 PRK09108 type III secretion sy 23.3 7.7E+02 0.017 24.8 10.4 57 295-351 122-182 (353)
251 KOG2533 Permease of the major 23.3 6.2E+02 0.013 26.7 10.1 57 29-90 274-336 (495)
252 cd02432 Nodulin-21_like_1 Nodu 22.2 6.5E+02 0.014 23.5 10.3 98 9-110 115-212 (218)
253 PRK08156 type III secretion sy 21.7 8.5E+02 0.018 24.7 10.3 59 295-353 115-177 (361)
No 1
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=100.00 E-value=5.9e-60 Score=483.95 Aligned_cols=313 Identities=15% Similarity=0.183 Sum_probs=264.3
Q ss_pred cCcCchhHHHHHHHHHHHHHHHHHHhhhccchhhcc---cCccchhHHHHHH-HHHHHHHHHHHHHhhcCCCCCchhHHH
Q 017012 22 LHPHETSALLHSSSCFFFILSAYFVVLPLRDEGAIS---LGLSKLPGLFVGS-LILTLIAAPVSTLIFSLPNLSKAKALV 97 (379)
Q Consensus 22 i~~~E~~~~l~~~l~~F~il~~y~ilrpird~l~vs---~Gae~lp~l~~~~-~~~~ll~~~iy~~L~~~~r~~r~rv~~ 97 (379)
|||+|.+|++++++++||++++|+++||+||+++++ .|+|.+||+|+.+ .|+.++++|+|+|++| |++|+++++
T Consensus 1 ~~~~E~~k~~~~~l~fF~il~~Y~iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~--~~~~~~lf~ 78 (472)
T TIGR00769 1 IEVHELKKFLPLFLMFFCILFNYTILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSN--ILSKEALFY 78 (472)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCHHHhHH
Confidence 699999999999999999999999999999999996 5999999999966 7788888999999999 999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHH
Q 017012 98 LIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNL 177 (379)
Q Consensus 98 ~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~ 177 (379)
+++.+|+.+|++|+++++|. +|.+|||..+|.++...++...++ .-+.++|.+. +||+|.|+||+
T Consensus 79 ~~~~~F~~~f~lF~~vl~p~----------~~~~~p~~~~~~~~~~~~~~~~~~-i~~~~~W~~~----~FYv~~elw~~ 143 (472)
T TIGR00769 79 TVISPFLGFFALFAFVIYPL----------SDLLHPTALADKLLSLLPPGFMGF-IAILRIWSFA----LFYVMAELWGS 143 (472)
T ss_pred HHHHHHHHHHHHHHHHHhcc----------hhhcCCcHHHHHHHhhcchhhHHH-HHHHhhhhHH----HHHHHHHHHHH
Confidence 99999999999999999887 499999988775555443222221 1125889987 89999999999
Q ss_pred HHHH-HHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHH--------HhHH------HHHHHHHHHHHHHHH
Q 017012 178 ITIS-STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF--------LGPY------LLLFAACLMELAAQS 242 (379)
Q Consensus 178 ~~~s-lfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~--------~g~~------lll~aa~ll~l~~~~ 242 (379)
+++| +||+++||+|++|||||+||++++|+|+|+++||.++.++++ .+++ ++.++++++++++.+
T Consensus 144 ~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~ 223 (472)
T TIGR00769 144 VVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILL 223 (472)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 999999999999999999999999999999999999999872 1222 445555666666666
Q ss_pred HHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHH
Q 017012 243 SKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSA 322 (379)
Q Consensus 243 ~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~ 322 (379)
.+++.++..+ + |+.. +..+ +++++++|+|+.||+|.+++||||++|++++++|+
T Consensus 224 ~~~l~~~~~~-----~--------~~~~-~~~~------------~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~ 277 (472)
T TIGR00769 224 YWWVNRNVLT-----D--------PRSY-NPAL------------KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYG 277 (472)
T ss_pred HHHHHhcccC-----C--------cccc-chhh------------ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 6666544321 1 1100 0000 01223448899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCC
Q 017012 323 VVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLLGL 378 (379)
Q Consensus 323 ~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG~ 378 (379)
+++|++|++||+++++.|||++|+++|||.++.++|++++++|++. ++++||+|.
T Consensus 278 ~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~-~~l~~~~Gw 332 (472)
T TIGR00769 278 ISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLS-GNVIRKYGW 332 (472)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhH
Confidence 9999999999999999999999999999999999999999999999 999999995
No 2
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=100.00 E-value=2.5e-57 Score=466.59 Aligned_cols=328 Identities=18% Similarity=0.268 Sum_probs=276.8
Q ss_pred hhhhhhHHHHhhcccCcCchhHHHHHHHHHHHHHHHHHHhhhccchhhcc-cCccchhHHHH-HHHHHHHHHHHHHHHhh
Q 017012 8 SKSRLDAFASVFVTLHPHETSALLHSSSCFFFILSAYFVVLPLRDEGAIS-LGLSKLPGLFV-GSLILTLIAAPVSTLIF 85 (379)
Q Consensus 8 ~~~~~~~~~~~~~~i~~~E~~~~l~~~l~~F~il~~y~ilrpird~l~vs-~Gae~lp~l~~-~~~~~~ll~~~iy~~L~ 85 (379)
++++..++-+++|||+++|.+|++++.+++||++++|+++|++||+++++ .|+|.+|++|+ +.+|++++++.+|+|++
T Consensus 4 ~~~~~~~~~~~~~pi~~~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~ 83 (491)
T PF03219_consen 4 SEKEFSKLRSIFWPIHRSELKKFLPLALMFFFILFNYTILRDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLS 83 (491)
T ss_pred chhhHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35577888889999999999999999999999999999999999999999 89999999988 77999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccc---cccchhh
Q 017012 86 SLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWG---DHGWFYV 162 (379)
Q Consensus 86 ~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~---~~~w~~~ 162 (379)
| +++|+++++++..+|+.+|.+|+++++|+ +|.+|||..+|.++ ...++|+ .|. .+||.++
T Consensus 84 n--~~s~~~lFy~~~~~F~~fF~~f~~vlyP~----------~~~lhp~~~~~~~~---~~~~~~~-~~~i~~~~~Wt~s 147 (491)
T PF03219_consen 84 N--RLSREKLFYIIIIPFLGFFALFAFVLYPN----------RDILHPDAFADKLL---AILPPGF-KGFIAMFRNWTFS 147 (491)
T ss_pred h--cCCHHHHHHHHHHHHHHHHHHHHHHHhhc----------hhhcCCCHHHHHhh---hhccchH-HHHHHHHHHHHHH
Confidence 9 99999999999999999999999999877 49999986555332 2245665 554 5999998
Q ss_pred hhhHHHHHHHHHHHHHHHH-HHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHH-H--------hHH-HHH-
Q 017012 163 SVRMGFFLWVALLNLITIS-STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF-L--------GPY-LLL- 230 (379)
Q Consensus 163 ~~~~~Fyvw~~v~~~~~~s-lfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~-~--------g~~-lll- 230 (379)
+||++.|+|+.+++| +||+++||+|+.|||||+||++++|+|+|+++||.++.++++ . +.+ ..+
T Consensus 148 ----lfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~ 223 (491)
T PF03219_consen 148 ----LFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLN 223 (491)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHH
Confidence 899999999888887 899999999999999999999999999999999999999876 1 222 111
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchh
Q 017012 231 FAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNY 310 (379)
Q Consensus 231 ~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~y 310 (379)
.....+.++..+...+++++++++.++ ++.. ++.+++++++.|.+..||++.+++|||
T Consensus 224 ~l~~~v~~~g~~i~~~~~~~~~~vl~~---------~~~~-------------~~~~~~kk~k~k~s~~es~k~l~kS~y 281 (491)
T PF03219_consen 224 SLMGIVLILGIVIILLYRYMNKNVLTD---------PRFY-------------PSAKKKKKKKPKMSLKESFKLLLKSKY 281 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCc---------cccc-------------hhhhcccccCCCccHHHHHHHHHhCHH
Confidence 112223344445556777777654211 1110 001112356677899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCC
Q 017012 311 LLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLLGL 378 (379)
Q Consensus 311 L~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG~ 378 (379)
|++|++++++|++++|++|++||+++++.|||++|+++|||.+.+++|++++++| +++++++||+|.
T Consensus 282 L~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~-~l~~~iir~~GW 348 (491)
T PF03219_consen 282 LLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMM-FLSSNIIRRFGW 348 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhH
Confidence 9999999999999999999999999999999999999999999999999999999 567999999984
No 3
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=100.00 E-value=1.7e-55 Score=443.50 Aligned_cols=332 Identities=17% Similarity=0.201 Sum_probs=280.1
Q ss_pred hhhhhhhhhHHHHhhcccCcCchhHHHHHHHHHHHHHHHHHHhhhccchhhcc-cCccchhHHHH-HHHHHHHHHHHHHH
Q 017012 5 RIISKSRLDAFASVFVTLHPHETSALLHSSSCFFFILSAYFVVLPLRDEGAIS-LGLSKLPGLFV-GSLILTLIAAPVST 82 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~i~~~E~~~~l~~~l~~F~il~~y~ilrpird~l~vs-~Gae~lp~l~~-~~~~~~ll~~~iy~ 82 (379)
..-.+++-+++.+++||||++|.+|++|+++++||++++|+++|++||+++++ .|+|.+||+|+ ...|++++++++|.
T Consensus 4 ~~~~~~~~~k~~~~~wpi~r~E~~kflpl~Ll~f~I~~ny~~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~ 83 (509)
T COG3202 4 TSEEEKYFSKLRSRLWPIRRYELKKFLPLALLFFCILFNYNLLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQ 83 (509)
T ss_pred CcccccccccchheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHH
Confidence 33445678888999999999999999999999999999999999999999999 99999999988 55889999999999
Q ss_pred HhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhc-cCCCC-CCCccc---cc
Q 017012 83 LIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVD-QGSTA-NSADWG---DH 157 (379)
Q Consensus 83 ~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~w~---~~ 157 (379)
|++| +++|++++++++++|+.+|++|+++++|. +|.+||| |+...+ ....| |+ .|+ .+
T Consensus 84 kl~~--~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~----------~~~~hp~----~~~~~~~~~~~p~~l-~~~ili~~ 146 (509)
T COG3202 84 KLLN--ILTREKVFYIILGFFLGFFALFAFVIYPY----------KDILHPD----PEFSRDLFADLPMFL-KWFILIVG 146 (509)
T ss_pred HHHh--hcCHHHHHHHHHHHHHHHHHHHHHHHhcc----------ccccCCC----HHHHHHHHhhCCccc-eeeeEeec
Confidence 9999 99999999999999999999999999987 3999995 555553 55666 76 887 59
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHH-HHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHH-H---h---HHH-
Q 017012 158 GWFYVSVRMGFFLWVALLNLITIS-STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF-L---G---PYL- 228 (379)
Q Consensus 158 ~w~~~~~~~~Fyvw~~v~~~~~~s-lfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~-~---g---~~l- 228 (379)
+|.|+ +||+|.|+|+.++.| +||+++||+|+.|||||+||+++.++|++.+++|.++.++.+ . . ...
T Consensus 147 ~Ws~s----~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~ 222 (509)
T COG3202 147 EWSYS----LFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLL 222 (509)
T ss_pred chHHH----HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHH
Confidence 99998 899999999888888 999999999999999999999999999999999999999872 1 1 111
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhc
Q 017012 229 LLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSS 308 (379)
Q Consensus 229 ll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S 308 (379)
+..-.++.......+..++|+++|.+.+++ .-. + .+++++++++.|.++.||++++.||
T Consensus 223 ~~~~~~vi~~~~~i~~~l~~~~~r~il~~~---------~f~-~-----------~~~~kk~~~k~k~~~~~s~k~i~~S 281 (509)
T COG3202 223 LQILFIVIVILGIIAILLYRYINRNVLTDP---------LFY-L-----------RAKKKKKKKKLKLGLIESFKMILRS 281 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCc---------chh-H-----------HHhcccccccccCcHHHHHHHHHhh
Confidence 111112222333444566677776543221 100 0 0011123466778999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCC
Q 017012 309 NYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLLGL 378 (379)
Q Consensus 309 ~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG~ 378 (379)
|||+.|++++++|++++|++|.+||+.+++.||+++|+++|||+++.++|+++++++++.+|+++||.|-
T Consensus 282 kyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW 351 (509)
T COG3202 282 KYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGW 351 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999983
No 4
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.35 E-value=1e-09 Score=110.30 Aligned_cols=262 Identities=14% Similarity=0.077 Sum_probs=154.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhccc--CccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSL 107 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs~--Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~ 107 (379)
+....+-.|+..++..+.......+..+. +.+.+.++..+......++.|+.|+++| |++|||++.+....+++..
T Consensus 5 f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laD--r~grr~vl~~~~~~~~~~~ 82 (393)
T PRK11195 5 FYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFAD--SFPKGRVMFIANGIKLLGC 82 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhh--ccCCchhhHHHHHHHHHHH
Confidence 44445556666665555544444443333 3455777777777888999999999999 9999999998887776554
Q ss_pred HHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017012 108 LVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARV 187 (379)
Q Consensus 108 llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~ 187 (379)
+++++.. . .. +.|. ..++..........+++
T Consensus 83 ~~~~~~~--~-----------------------------------~~---------~~r~---l~G~~~a~~~pa~~a~i 113 (393)
T PRK11195 83 LLMLFGI--H-----------------------------------PL---------LAYG---LVGIGAAAYSPAKYGIL 113 (393)
T ss_pred HHHHHHH--H-----------------------------------HH---------HHHH---HHHHHHHHHHHHHHHHH
Confidence 4443311 0 01 1122 23444566667888999
Q ss_pred HhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCC
Q 017012 188 IDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFLGPY-LLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSD 266 (379)
Q Consensus 188 ~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~~g~~-lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~ 266 (379)
.|+++.||..|..|+.+.+.++|.++||.+++.+...... .+.+.+.+..++....+. .++. +
T Consensus 114 ~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~~~~~~----l~~~----~-------- 177 (393)
T PRK11195 114 TELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLAALFNLF----IPRL----G-------- 177 (393)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCC----c--------
Confidence 9999999999999999999999999999999998754432 333222222223222111 1110 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHH
Q 017012 267 PRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGR 346 (379)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~ 346 (379)
++++ ++ + . +.++...+..++.+.++++|.+........+.......+.+......++.+..++..
T Consensus 178 ~~~~----~~-------~-~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~ 242 (393)
T PRK11195 178 ARRP----GQ-------S-W---NPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQ 242 (393)
T ss_pred cccc----cc-------C-C---CHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhH
Confidence 0000 00 0 0 000111145677888999999875544443333333333333333444444433222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 347 RRLLAEINSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 347 taf~G~~~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
.|.+....++..++...+. +++.+|.|
T Consensus 243 ---~G~~~~~~~~g~i~g~~~~-~~l~~~~~ 269 (393)
T PRK11195 243 ---PAYLQAVVAIGIAVGAGAA-ARLVTLET 269 (393)
T ss_pred ---HHHHHHHHHHHHHHHHHHH-HHHhcCCc
Confidence 4777777777666665554 78776654
No 5
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.35 E-value=1.3e-09 Score=105.42 Aligned_cols=265 Identities=14% Similarity=0.071 Sum_probs=151.4
Q ss_pred HHHHHHHHHHHHhhhccchhhccc--CccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHH
Q 017012 35 SCFFFILSAYFVVLPLRDEGAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFL 112 (379)
Q Consensus 35 l~~F~il~~y~ilrpird~l~vs~--Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~ 112 (379)
+..|+...+..+..+.-.....+. ..+.+.++........++..|+.|+++| |++|||++........+..+++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~d--r~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 6 AAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALAD--RYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHH--hhchhHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444344442 2344556666667788899999999999 999999988766555444444333
Q ss_pred HHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 017012 113 LWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMD 192 (379)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~ 192 (379)
.-.... .+ .|. .++ ..+..++.+........+++.|.++
T Consensus 84 ~~~~~~------------------~~--------------~~~----~~~-----~~~l~g~~~~~~~~~~~~~~~~~~~ 122 (365)
T TIGR00900 84 VALLGG------------------LN--------------IWQ----VYV-----LAGILAIAQAFFTPAYQAMLPDLVP 122 (365)
T ss_pred HHHcCC------------------Cc--------------HHH----HHH-----HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 221100 00 231 121 2222344455566678899999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCC
Q 017012 193 SESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSG 270 (379)
Q Consensus 193 ~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~ 270 (379)
.+|+.|.+|+...+.++|.++|+.+++.+. ..|. +.+.+.++...++......+ +..+. ++.+
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~~ 187 (365)
T TIGR00900 123 EEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSV-RIPEL--------------AASE 187 (365)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc-ccccC--------------CCcc
Confidence 999999999999999999999999999886 4554 34444343333333322211 11000 0000
Q ss_pred CCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCChHHHHHH
Q 017012 271 ADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFY-FQKVTVIAMTVSSSLGRRRL 349 (379)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~-~~~~~~v~~~~~~~~~~taf 349 (379)
..+ .+++...+..++++.++++|.+..+++..+++........ .......++.+..+++..
T Consensus 188 --~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 249 (365)
T TIGR00900 188 --IQA--------------LSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHY-- 249 (365)
T ss_pred --ccc--------------cchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHH--
Confidence 000 0001112456778899999999877776666555443333 222222333233333333
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 350 LAEINSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 350 ~G~~~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
|.+....++..++.+.+. +++.+|+|
T Consensus 250 -~~~~~~~~~~~~~~~~~~-~~l~~~~~ 275 (365)
T TIGR00900 250 -GWVLAAFGLGALLGALLL-GLLGRYFK 275 (365)
T ss_pred -HHHHHHHHHHHHHHHHHH-HHHHHHhc
Confidence 566666667676666654 68888776
No 6
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.26 E-value=1.9e-09 Score=103.81 Aligned_cols=160 Identities=20% Similarity=0.304 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHhhhccc-hhhccc--CccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHH
Q 017012 34 SSCFFFILSAYFVVLPLRD-EGAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVF 110 (379)
Q Consensus 34 ~l~~F~il~~y~ilrpird-~l~vs~--Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llf 110 (379)
++..|+...+..+..|.-. .+.-+. ..+++.++.........+..++.|+++| |+||||++.+....+++..++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d--r~g~r~~l~~~~~~~~~~~~~~ 79 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSD--RFGRRRVLIIGLLLFALGSLLL 79 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHH--HS-HHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCeeeEeehhhhhhhHHHHh
Confidence 3456666677777666666 343333 3556777777778889999999999999 9999998877776666553333
Q ss_pred HHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017012 111 FLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDV 190 (379)
Q Consensus 111 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di 190 (379)
.+. .+ .| .+. +..+..++.........-.++.|.
T Consensus 80 ~~~--~~-----------------------------------~~-----~~~----~~~~l~g~~~~~~~~~~~~~i~~~ 113 (352)
T PF07690_consen 80 AFA--SN-----------------------------------FW-----LLL----IARFLLGIGSGFFSPASNALIADW 113 (352)
T ss_dssp HHH--CC-----------------------------------HH-----HHH----HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhh--hh-----------------------------------HH-----HHh----hhcccccccccccccccccccccc
Confidence 221 11 23 121 122223444456666888899999
Q ss_pred cCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHH
Q 017012 191 MDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQ 241 (379)
Q Consensus 191 ~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa~ll~l~~~ 241 (379)
++.||+.|.+++...+.++|.++|+.+++.+. ..|. +.+++.+++..++.+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~i 166 (352)
T PF07690_consen 114 FPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAI 166 (352)
T ss_dssp CCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHH
T ss_pred chhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhh
Confidence 99999999999999999999999999998876 4454 244444444444433
No 7
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.22 E-value=2.5e-08 Score=97.70 Aligned_cols=143 Identities=17% Similarity=-0.000 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 017012 36 CFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLL 113 (379)
Q Consensus 36 ~~F~il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~ 113 (379)
..++...+.....|.-+.+.-+.| .++..++.........+..++.|+++| |++||+++.+....+.+..+++++.
T Consensus 13 ~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d--~~g~r~~~~~~~~~~~~~~~~~~~~ 90 (385)
T TIGR00710 13 LSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSD--RYGRRPVLLLGLFIFALSSLGLALS 90 (385)
T ss_pred HHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHH--hcCChHHHHHHHHHHHHHHHHHHHH
Confidence 344455677777777665544433 445666666667778899999999999 9999999877655554444433321
Q ss_pred HhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 017012 114 WQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDS 193 (379)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~ 193 (379)
+ + .| .+. +.+. ..............+++.|.++.
T Consensus 91 -----~------------------~--------------~~-----~~~-~~~~---l~g~~~~~~~~~~~~~~~~~~~~ 124 (385)
T TIGR00710 91 -----N------------------N--------------IE-----TLL-VLRF---VQAFGASAGSVISQALVRDIYPG 124 (385)
T ss_pred -----c------------------c--------------HH-----HHH-HHHH---HHHcchhHHHHHHHHHHHHhcCc
Confidence 1 0 12 111 1122 12222333445666889999999
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH
Q 017012 194 ESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 194 ~eakR~fgligag~~lG~I~G~~l~~~la-~~g~ 226 (379)
+|+.|.+|+..++.++|.++|+.+++.+. +.+.
T Consensus 125 ~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 158 (385)
T TIGR00710 125 EELSRIYSILMPVLALAPAVAPLLGGYILVWLSW 158 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 99999999999999999999999998876 4454
No 8
>PRK03545 putative arabinose transporter; Provisional
Probab=99.21 E-value=3.7e-08 Score=98.16 Aligned_cols=157 Identities=17% Similarity=0.177 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q 017012 29 ALLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (379)
Q Consensus 29 ~~l~~~l~~F~il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~ 106 (379)
.++.+.+..|+...+.++.-|+-+.+.-+.| .++..++.........+..++.|+++| |++|||++.+....+.+.
T Consensus 10 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~~~~~ 87 (390)
T PRK03545 10 RVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTS--NVERRKLLIGLFVLFIAS 87 (390)
T ss_pred HHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCChHHHHHHHHHHHHHH
Confidence 3444455555554555555555555544433 445556555556677788889999999 999999998877666555
Q ss_pred HHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 017012 107 LLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWAR 186 (379)
Q Consensus 107 ~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~ 186 (379)
.+.+++.- + .| ++++ .|. ...+.........-++
T Consensus 88 ~~~~~~~~--~-----------------------------------~~----~l~~--~r~---~~G~~~~~~~~~~~~~ 121 (390)
T PRK03545 88 HVLSALAW--N-----------------------------------FT----VLLI--SRI---GIAFAHAIFWSITASL 121 (390)
T ss_pred HHHHHHhc--c-----------------------------------HH----HHHH--HHH---HHHHHHHHHHHHHHHH
Confidence 55444311 0 23 1221 122 1222223333455678
Q ss_pred HHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHH
Q 017012 187 VIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAA 233 (379)
Q Consensus 187 ~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa 233 (379)
++|.++.||+.|..|+.+.+.++|.++||.+++.+. .+|. +.+.+.+
T Consensus 122 i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~ 170 (390)
T PRK03545 122 AIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIG 170 (390)
T ss_pred HHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHH
Confidence 999999999999999999999999999999998876 4564 3444433
No 9
>PRK10054 putative transporter; Provisional
Probab=99.19 E-value=1.2e-08 Score=102.60 Aligned_cols=168 Identities=12% Similarity=0.068 Sum_probs=112.5
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhhhccchhhcc-cCc--cchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHH
Q 017012 24 PHETSALLHSSSCFFFILSAYFVVLPLRDEGAIS-LGL--SKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIH 100 (379)
Q Consensus 24 ~~E~~~~l~~~l~~F~il~~y~ilrpird~l~vs-~Ga--e~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~ 100 (379)
..+.|.++...+..|+...+++..-|.-.....+ .|. ++.-++.......+.+..|+.|+++| |++||+++.+..
T Consensus 3 ~~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~D--r~g~k~~~~~~~ 80 (395)
T PRK10054 3 LSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILAD--KFDKKRYMLLAI 80 (395)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCcchhHHHHH
Confidence 3455566777777888999988888866555444 443 44555565656788889999999999 999999887766
Q ss_pred HHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHH
Q 017012 101 RFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITI 180 (379)
Q Consensus 101 ~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~ 180 (379)
..+.+.++++++.- + .| ... +.+...........
T Consensus 81 ~~~~~~~~~~~~~~--~-----------------------------------~~-----~~~----~~~~~~g~~~~~~~ 114 (395)
T PRK10054 81 TAFASGFIAIPLVN--N-----------------------------------VT-----LVV----LFFALINCAYSVFS 114 (395)
T ss_pred HHHHHHHHHHHHHh--H-----------------------------------HH-----HHH----HHHHHHHHHHHHHH
Confidence 55544444443311 0 12 111 11111222222334
Q ss_pred HHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHhH-HHHHHHHHHHHHH
Q 017012 181 SSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFLGP-YLLLFAACLMELA 239 (379)
Q Consensus 181 slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~~g~-~lll~aa~ll~l~ 239 (379)
...++..+|.++.|++.|.+|+...+.++|.++||.+++.+...|. ..+.+.+++..++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~ 174 (395)
T PRK10054 115 TVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFP 174 (395)
T ss_pred HHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHH
Confidence 4678889999999999999999999999999999999998776554 3444444443343
No 10
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.17 E-value=5.1e-08 Score=97.55 Aligned_cols=149 Identities=12% Similarity=0.064 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSL 107 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~ 107 (379)
.+...+..|+...+..+..|.-+.+.-+.| .+...+..........+..++.|+++| |++|||++.+....+.+..
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~d--r~g~r~~l~~~~~~~~~~~ 92 (406)
T PRK15402 15 PLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSD--RIGRRPVMLAGVAFFILTC 92 (406)
T ss_pred HHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHHH
Confidence 334444445555677777777666554443 445666666667778889999999999 9999998877665554444
Q ss_pred HHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017012 108 LVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARV 187 (379)
Q Consensus 108 llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~ 187 (379)
+.+++. . + .| .+. +......+-........++.+
T Consensus 93 ~~~~~~---~--------------------~--------------~~-----~l~----~~~~l~G~~~~~~~~~~~~~i 126 (406)
T PRK15402 93 LAILLA---Q--------------------S--------------IE-----QFT----LLRFLQGIGLCFIGAVGYAAI 126 (406)
T ss_pred HHHHHH---c--------------------c--------------HH-----HHH----HHHHHHHhHhhhHHHHHHHHH
Confidence 433321 0 0 12 111 111112222233344678889
Q ss_pred HhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHH-HhH
Q 017012 188 IDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF-LGP 226 (379)
Q Consensus 188 ~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~-~g~ 226 (379)
.|.++.+++.|..++...+..+|.++||.+++.+.+ .+.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w 166 (406)
T PRK15402 127 QESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPW 166 (406)
T ss_pred HHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 999999999999999999999999999999888763 443
No 11
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.16 E-value=9.3e-08 Score=94.90 Aligned_cols=152 Identities=17% Similarity=0.216 Sum_probs=100.0
Q ss_pred chhH-HHHHHHHHHHHHHHHHHhhhccchhhcccCccc-------hhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHH
Q 017012 26 ETSA-LLHSSSCFFFILSAYFVVLPLRDEGAISLGLSK-------LPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALV 97 (379)
Q Consensus 26 E~~~-~l~~~l~~F~il~~y~ilrpird~l~vs~Gae~-------lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~ 97 (379)
++++ +..+.+..|+...++++..|.-+.+..+.|.+. ...+.........+..|+.|+++| |++||+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~d--r~g~r~~~~ 88 (408)
T PRK09874 11 NWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLAD--RKGRKIMLL 88 (408)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhCcHHHHH
Confidence 3343 444445677888888888888777765544332 133444556778899999999999 999999887
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHH
Q 017012 98 LIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNL 177 (379)
Q Consensus 98 ~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~ 177 (379)
+......+..+++++. . + .|. .++ .+++ ..+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~---~--------------------~--------------~~~----~~~--~~~~---~g~~~~ 122 (408)
T PRK09874 89 RSALGMGIVMVLMGLA---Q--------------------N--------------IWQ----FLI--LRAL---LGLLGG 122 (408)
T ss_pred HHHHHHHHHHHHHHHH---h--------------------h--------------HHH----HHH--HHHH---HHHhhh
Confidence 6554444433333221 1 0 121 111 1222 222222
Q ss_pred HHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH
Q 017012 178 ITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 178 ~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~ 226 (379)
......+.+.|.++.+|..+..++...+.++|.++|+.+++.+. ..+.
T Consensus 123 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 171 (408)
T PRK09874 123 -FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGL 171 (408)
T ss_pred -hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 23456678899999999999999999999999999999998876 4454
No 12
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.15 E-value=1.7e-08 Score=97.67 Aligned_cols=250 Identities=8% Similarity=-0.002 Sum_probs=135.2
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCc
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDP 139 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (379)
.++..++.........+..++.|+++| |++||+++.+....+.+..+++++.. +
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~g~l~d--~~g~r~~~~~~~~~~~~~~~~~~~~~--~---------------------- 81 (399)
T TIGR00893 28 AAQYGYVFSAFSWGYVVGQFPGGWLLD--RFGARKTLAVFIVIWGVFTGLQAFAG--A---------------------- 81 (399)
T ss_pred hhhHHHHHHHHHHHHHHHHHhHHHHHH--hcCcceeeHHHHHHHHHHHHHHHHHc--C----------------------
Confidence 445566666667788899999999999 99999998776655544444443311 0
Q ss_pred hhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHH
Q 017012 140 KAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAA 219 (379)
Q Consensus 140 ~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~ 219 (379)
.| .+. +..+...............+++|.++.||+.+.+++...+.++|.++|+.+++
T Consensus 82 -------------~~-----~~~----~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 139 (399)
T TIGR00893 82 -------------YV-----SLY----ILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVG 139 (399)
T ss_pred -------------HH-----HHH----HHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 12 121 12222333344455577789999999999999999999999999999999988
Q ss_pred HHH-HHhH-HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccc
Q 017012 220 GMA-FLGP-YLLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWA 297 (379)
Q Consensus 220 ~la-~~g~-~lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (379)
.+. ..+. +.+.+.+++..+.........+..++. +.. .+ ++++.+..+ +.....++.++++ .
T Consensus 140 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~--~~~~~~~~~----~~~~~~~~~~~~~----~ 203 (399)
T TIGR00893 140 WILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQK-----AKW-LT--EEEKYIVVG----GLLAEQQGKGPST----P 203 (399)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCc-----ccc-CC--HHHHhhcch----hhccccccccccC----C
Confidence 765 4453 333333333223222222211111110 000 00 000000000 0000000000011 1
Q ss_pred hHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 298 ILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 298 ~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
..+..+.++++|.+..+++..+++....+....-...+.++.+..+++.. |.+....++..++.+.+. +++.+|+|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-g~~~~~~~ 279 (399)
T TIGR00893 204 KKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEA---GFMASLPGIVGFIGMILG-GRLSDLLL 279 (399)
T ss_pred CccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHh---hHHHHHHHHHHHHHHHHH-HHHHHHHh
Confidence 23346677788888777766666665555444444444454444333333 444455555555555543 56666654
No 13
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.12 E-value=4.2e-08 Score=97.96 Aligned_cols=275 Identities=12% Similarity=0.056 Sum_probs=144.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhcc-cC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs-~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~ 106 (379)
++.+....|+...++....|.-.....+ .| ..+...+.....+...+..|+.|+++| |++|||.+.+....+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~D--r~grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 4 FWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISD--KLGLKKHLLWIISGLLVL 81 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCcHHHHHHHHHHHHHH
Confidence 4445556777888888888866555443 33 344555566667889999999999999 999999987766555433
Q ss_pred HHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 017012 107 LLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWAR 186 (379)
Q Consensus 107 ~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~ 186 (379)
...+......... . .. .+. ... +.++ ..+..........=++
T Consensus 82 ~~~~~~~~~~~~~------------------~-----~~-------~~~----~~~-~~~~---~~g~~~~~~~~~~~~~ 123 (396)
T TIGR00882 82 FAPFFIYVFGPLL------------------Q-----SN-------ILV----GAI-VGGL---YLGFVFSAGAGAIEAY 123 (396)
T ss_pred HHHHHHHHhhhHH------------------H-----HH-------HHH----HHH-HHHH---HHHHHhccchhhHHHH
Confidence 3322211100000 0 00 010 000 0011 1111111111111122
Q ss_pred HHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCC
Q 017012 187 VIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFLGPY-LLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADS 265 (379)
Q Consensus 187 ~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~~g~~-lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~ 265 (379)
+.|.. ++..+.||....++++|..+|+.+++.+...+.. .+.+.+++..+...+.... .++ +|.
T Consensus 124 ~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~---~~~-----~~~----- 188 (396)
T TIGR00882 124 IEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILMLLLMFA---KPK-----APS----- 188 (396)
T ss_pred HHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHh---CCC-----Cch-----
Confidence 33432 2223578999999999999999999888766653 5554444433333322211 111 000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHH
Q 017012 266 DPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLG 345 (379)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~ 345 (379)
+++. +.+ .+ . + +++ ...+.++.++++|.+..++...++.....+..+.......++.+.++..
T Consensus 189 -~~~~--~~~---~~--~-~-----~~~---~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 251 (396)
T TIGR00882 189 -SATV--ANA---LG--A-N-----ASA---FSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQ 251 (396)
T ss_pred -hhhh--hcc---cc--c-c-----cCC---CCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 0000 000 00 0 0 001 1123356778888876666665555555555554445555555433222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 346 RRRLLAEINSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 346 ~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
-.+..|......++...+.+.+. +++.+|+|
T Consensus 252 ~~~~~g~~~~~~~i~~~~~~~~~-g~l~~r~g 282 (396)
T TIGR00882 252 GTRVFGYVTTMGELLNALIMFCA-PLIINRIG 282 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHHH-HHHHHHhc
Confidence 23345777777777777777655 79999987
No 14
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.09 E-value=2.5e-08 Score=100.50 Aligned_cols=278 Identities=13% Similarity=0.046 Sum_probs=141.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhhccchhhcc-cC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHH
Q 017012 25 HETSALLHSSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHR 101 (379)
Q Consensus 25 ~E~~~~l~~~l~~F~il~~y~ilrpird~l~vs-~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~ 101 (379)
.+.+.++.+.+..|+..++++..-|.-.....+ .| ..++..+.........+..|+.|+++| |++|||++.+...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~D--r~g~r~~~~~~~~ 84 (420)
T PRK09528 7 LKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISD--KLGLKKHLLWIIS 84 (420)
T ss_pred hcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCchHHHHHHHH
Confidence 344566667777788888888777776555544 33 445566666778889999999999999 9999999877655
Q ss_pred HHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHH
Q 017012 102 FFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITIS 181 (379)
Q Consensus 102 ~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~s 181 (379)
.+++....+..... . . .+..+.|.. .++ ..++......
T Consensus 85 ~~~~~~~~~~~~~~-~-~---------------------------------~~~~~~~~~------~~~-~~~~~~~~~~ 122 (420)
T PRK09528 85 GLLVLFGPFFIYVF-A-P---------------------------------LLQYNILLG------AIV-GGIYLGFGFL 122 (420)
T ss_pred HHHHHHHHHHHHHH-H-H---------------------------------HHHHHHHHH------HHH-HHHHhhhhhc
Confidence 54333221111000 1 0 010000000 000 0111000000
Q ss_pred HHHHHHHhhcC--ccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 017012 182 STWARVIDVMD--SESGSRLFGFIGAGATLGQLFGSLFAAGMAFLGP-YLLLFAACLMELAAQSSKGIYKEIPRRPEELP 258 (379)
Q Consensus 182 lfW~~~~di~~--~~eakR~fgligag~~lG~I~G~~l~~~la~~g~-~lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~ 258 (379)
..-..+++.++ .++..+.||....++++|..+|+.+++.+...+. ..+++.+++..+++.....+ ..+.
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~---~~~~----- 194 (420)
T PRK09528 123 AGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLVLLFFA---KPDA----- 194 (420)
T ss_pred cchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHhcc---cccc-----
Confidence 01111222222 2233447899999999999999999998875554 34444443333333322111 1100
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017012 259 PLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAM 338 (379)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~ 338 (379)
+++. +..++ +++ ++++ ...+..+.++++|.++.+++..++........+........+
T Consensus 195 --------~~~~-~~~~~-------~~~---~~~~---~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~ 252 (420)
T PRK09528 195 --------PSTA-KVANA-------LGA---NASA---VSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFAS 252 (420)
T ss_pred --------cchh-hhccc-------hhc---cccc---ccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 00000 000 0011 223445667788876555544444433333333333333333
Q ss_pred hcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 339 TVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 339 ~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
.+.+...-+...|.+.+..++...+.+.+ .|++.+|+|
T Consensus 253 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~g~l~dr~g 290 (420)
T PRK09528 253 FFATPEQGTRVFGYLNSFQVFLEALIMFF-APFIINRIG 290 (420)
T ss_pred HHhccCcchHHHHHHHHHHHHHHHHHHHH-HHHHHHHhC
Confidence 33222111344577777777777777665 589999987
No 15
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.07 E-value=2.7e-07 Score=91.86 Aligned_cols=149 Identities=10% Similarity=0.036 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhccc--CccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSL 107 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs~--Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~ 107 (379)
+....+..++...++.+.-|.-+.+.-+. +.+...++.........+..++.|+++| |++|||++.+.....++..
T Consensus 10 l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~D--r~grr~~~~~~~~~~~~~~ 87 (394)
T PRK11652 10 LFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSD--RVGRRPVILVGMSIFILGT 87 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHH--hcCChHHHHHHHHHHHHHH
Confidence 34455556677777777777766655443 3445555555666778889999999999 9999998877655544333
Q ss_pred HHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017012 108 LVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARV 187 (379)
Q Consensus 108 llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~ 187 (379)
+++.+ . + + .|. ++. .|. ..+............+.
T Consensus 88 ~~~~~----~-~------------------~--------------~~~----l~~--~~~---~~g~~~~~~~~~~~~~~ 121 (394)
T PRK11652 88 LVALF----A-H------------------S--------------LTV----LIA--ASA---IQGLGTGVGGVMARTLP 121 (394)
T ss_pred HHHHH----H-c------------------c--------------HHH----HHH--HHH---HHHhhhhHHHHHHHHHH
Confidence 33322 1 1 0 120 111 122 12222222334556778
Q ss_pred HhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH
Q 017012 188 IDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 188 ~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~ 226 (379)
.|.++.++..+..++.+.|..+|.++||.+++.+. ..|.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~ 161 (394)
T PRK11652 122 RDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGW 161 (394)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 89999899999999999999999999999988876 3453
No 16
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.07 E-value=3e-07 Score=91.39 Aligned_cols=149 Identities=13% Similarity=0.023 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhcccCcc--chhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAISLGLS--KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSL 107 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs~Gae--~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~ 107 (379)
....++..+....++.+.-+.-+.+.-+.|.+ ..-++.........+..|+.|+++| |++||+++.+....+++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~D--r~g~r~~l~~~~~~~~i~~ 82 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIAD--RSGRKPVAIPGAALFIIAS 82 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHH--HhCChHHHHHHHHHHHHHH
Confidence 34455666777777776666666555554433 3444444555667788999999999 9999998876554444333
Q ss_pred HHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017012 108 LVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARV 187 (379)
Q Consensus 108 llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~ 187 (379)
+++.. . . + .| +.++ .|. .............++.+
T Consensus 83 ~~~~~----~-~------------------~--------------~~----~~~~--~~~---l~g~~~~~~~~~~~~~i 116 (392)
T PRK10473 83 LLCSL----A-E------------------T--------------SS----LFLA--GRF---LQGIGAGCCYVVAFAIL 116 (392)
T ss_pred HHHHH----h-C------------------c--------------HH----HHHH--HHH---HHHhhhhHHHHHHHHHH
Confidence 33322 1 0 0 12 1111 122 22333334445678899
Q ss_pred HhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH
Q 017012 188 IDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 188 ~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~ 226 (379)
+|.++.+|+.+..++...+.++|.++||.+++.+. ..|.
T Consensus 117 ~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~ 156 (392)
T PRK10473 117 RDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPW 156 (392)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCh
Confidence 99999999999999999999999999999987765 4453
No 17
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.05 E-value=2.4e-07 Score=92.86 Aligned_cols=250 Identities=17% Similarity=0.084 Sum_probs=140.3
Q ss_pred HHHHhhhccchhhcc--cCccchhHHHHHHHHHHHHHHHHHHHhhcCCCC-----Cchh-HHHHHHHHHHHHHHHHHHHH
Q 017012 43 AYFVVLPLRDEGAIS--LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNL-----SKAK-ALVLIHRFFSVSLLVFFLLW 114 (379)
Q Consensus 43 ~y~ilrpird~l~vs--~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~-----~r~r-v~~~~~~~f~~~~llfa~~~ 114 (379)
.+.+..+.-....-+ ...+++-.+.....+ .++.|+.|+++| |+ +||| .+.+.....++.+++.++.
T Consensus 14 ~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~D--r~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~- 88 (402)
T PRK11902 14 PLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMD--RYTPPLLGRRRGWLLLTQVGLAASIAAMAFC- 88 (402)
T ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHH--cccccCCCcchhHHHHHHHHHHHHHHHHHhc-
Confidence 344444433333333 345666666554455 699999999999 99 6765 6666555554444433321
Q ss_pred hhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 017012 115 QSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSE 194 (379)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~ 194 (379)
+. . + + .| ... +.++..+..+........+++.|.++.|
T Consensus 89 -~~-~------------------~------~-------~~-----~l~----~~~~~~~~~~~~~~~~~~al~~~~~~~~ 126 (402)
T PRK11902 89 -PP-H------------------A------A-------LW-----PLA----GLAVLVAFLSASQDIVFDAYSTDVLHPE 126 (402)
T ss_pred -Cc-c------------------c------h-------HH-----HHH----HHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 00 0 0 0 23 111 2222235556666678899999999999
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHHH-H-hHH-HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCC
Q 017012 195 SGSRLFGFIGAGATLGQLFGSLFAAGMAF-L-GPY-LLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGA 271 (379)
Q Consensus 195 eakR~fgligag~~lG~I~G~~l~~~la~-~-g~~-lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~ 271 (379)
|+.|..++...|.++|.++|+.++..+.. . |.. .+.+.+++..++.... + ..+. + .+ ++++
T Consensus 127 ~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~--~--~~~e-----~-~~-----~~~~- 190 (402)
T PRK11902 127 ERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTT--L--WAPE-----P-EV-----PARP- 190 (402)
T ss_pred hhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH--H--hcCC-----C-cc-----cccc-
Confidence 99999999999999999999988887764 3 542 4443333332322221 1 1110 0 00 0000
Q ss_pred CCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 017012 272 DGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLA 351 (379)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G 351 (379)
+++.+.+..++++.++++|.++.+++...++................+...-+. .-.|
T Consensus 191 -------------------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~---~~~g 248 (402)
T PRK11902 191 -------------------PRSLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSA---GEVG 248 (402)
T ss_pred -------------------cchhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCH---HHHH
Confidence 000011356788899999998877777666655443322111122223232222 2335
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 352 EINSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 352 ~~~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
.+....++...++.....+++.+|+|
T Consensus 249 ~~~~~~~~~~~i~g~~~~g~l~~r~g 274 (402)
T PRK11902 249 IVNKTLGLAATIVGALAGGTLMVRLG 274 (402)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 56556666555555556789999887
No 18
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.05 E-value=2.7e-07 Score=90.77 Aligned_cols=130 Identities=11% Similarity=0.043 Sum_probs=87.9
Q ss_pred hccchhhccc--CccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhc
Q 017012 49 PLRDEGAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLE 126 (379)
Q Consensus 49 pird~l~vs~--Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~ 126 (379)
|.-+.+.-+. +.++..++.........+..++.|+++| |++||+++.......++..+++.+. .
T Consensus 12 p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d--~~g~~~~~~~~~~~~~i~~~~~~~~-----~------- 77 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMAD--SFGRKPVILGGTLVFALAAVACALA-----Q------- 77 (377)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHh--hcCChHHHHHHHHHHHHHHHHHHHH-----c-------
Confidence 4444444332 3455666666666778888999999999 9999998877665555444444331 0
Q ss_pred hhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHH
Q 017012 127 SLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAG 206 (379)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag 206 (379)
+ .| .+. +.................+++.|.++.||+.+.+++...+
T Consensus 78 -----------~--------------~~-----~~~----~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (377)
T PRK11102 78 -----------T--------------ID-----QLI----YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLV 123 (377)
T ss_pred -----------c--------------HH-----HHH----HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 0 12 111 1222233333444556788999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHH-HHhH
Q 017012 207 ATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 207 ~~lG~I~G~~l~~~la-~~g~ 226 (379)
..+|.++|+.+++.+. ..+.
T Consensus 124 ~~~g~~~~~~~~~~l~~~~~~ 144 (377)
T PRK11102 124 MTIAPLLAPIIGGWLLVWFSW 144 (377)
T ss_pred HHHHHHHHHHHHHHHHHHcCh
Confidence 9999999999988876 3453
No 19
>PRK10504 putative transporter; Provisional
Probab=99.05 E-value=3.3e-07 Score=93.51 Aligned_cols=159 Identities=14% Similarity=0.133 Sum_probs=109.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhhccchhhcccCcc--chhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHH
Q 017012 25 HETSALLHSSSCFFFILSAYFVVLPLRDEGAISLGLS--KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRF 102 (379)
Q Consensus 25 ~E~~~~l~~~l~~F~il~~y~ilrpird~l~vs~Gae--~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~ 102 (379)
++.+.++.+++.+|+....++..-|.-+.+.-+.|.+ +.-++.........+..|+.|+++| |++|||++......
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d--~~g~r~~~~~~~~~ 84 (471)
T PRK10504 7 SVRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLAD--RVGVRNIFFTAIVL 84 (471)
T ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhchHHHHHHHHHH
Confidence 4455677788888888888888888777776665544 3445555556667888999999999 99999998776655
Q ss_pred HHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHH
Q 017012 103 FSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISS 182 (379)
Q Consensus 103 f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~sl 182 (379)
+++..+++++. .+ .| .+. +.|. ...+........
T Consensus 85 ~~~~~~~~~~~--~~-----------------------------------~~-----~l~-~~~~---l~g~~~~~~~~~ 118 (471)
T PRK10504 85 FTLGSLFCALS--GT-----------------------------------LN-----ELL-LARV---LQGVGGAMMVPV 118 (471)
T ss_pred HHHHHHHHHHh--CC-----------------------------------HH-----HHH-HHHH---HHHhhhHHHHHH
Confidence 55544443321 00 12 111 1122 223323334456
Q ss_pred HHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHH
Q 017012 183 TWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLF 231 (379)
Q Consensus 183 fW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~ 231 (379)
....+.|.++.++..+.+|+.+.++++|..+|+.+++.+. +.|. +.+.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~ 169 (471)
T PRK10504 119 GRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLI 169 (471)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHH
Confidence 7888999999999999999999999999999999999887 4453 34443
No 20
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.05 E-value=3.2e-08 Score=95.90 Aligned_cols=248 Identities=13% Similarity=0.029 Sum_probs=131.9
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCc
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDP 139 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (379)
.+...++........++..++.|+++| |++||+++.+......+..+++++.- +
T Consensus 29 ~~~~g~~~~~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~~~~~~~~~~~~~--~---------------------- 82 (379)
T TIGR00881 29 KTDLGLLLSSFSIAYGISKFVMGSVSD--RSNPRVFLPIGLILCAIVNLFFGFST--S---------------------- 82 (379)
T ss_pred HhHHHHHHHHHHHHHHhhhhhhhHHHH--hhCCeehhHHHHHHHHHHHHHHHHhh--h----------------------
Confidence 445566666667788889999999999 99999988877666555555444321 0
Q ss_pred hhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhH-HHH
Q 017012 140 KAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGS-LFA 218 (379)
Q Consensus 140 ~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~-~l~ 218 (379)
.| .+. +..+..++..........+++.|.++.+|+.+.+++.+.+.++|.++|+ .++
T Consensus 83 -------------~~-----~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 140 (379)
T TIGR00881 83 -------------LW-----VMA----ALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVL 140 (379)
T ss_pred -------------HH-----HHH----HHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHH
Confidence 22 121 1111223333344557788999999999999999999999999999999 455
Q ss_pred HHHH-HHhH-HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCccc
Q 017012 219 AGMA-FLGP-YLLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLW 296 (379)
Q Consensus 219 ~~la-~~g~-~lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (379)
..+. ..+. ..+.+.+++..+.........+..++.. ..+. . ++..+++.+. . ++ ++++...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~---~~~~~~~~~~-------~-~~--~~~~~~~ 203 (379)
T TIGR00881 141 FGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSC--GLPP--A---EEMPNEEPDG-------D-AE--KKEEELT 203 (379)
T ss_pred HHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCcccc--ccCc--c---ccCccccccc-------c-cc--ccccccc
Confidence 5554 3343 3343333322222222222222111100 0000 0 0000000000 0 00 0000001
Q ss_pred chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 017012 297 AILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLL 376 (379)
Q Consensus 297 ~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrl 376 (379)
......+.++++|.+..+++..++.....+........+..+.+..+.+.. |......++..++.+.+ .+++.+|.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~-~g~l~~r~ 279 (379)
T TIGR00881 204 KKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKA---SWAFTLYELGGLVGTLL-AGWLSDKL 279 (379)
T ss_pred chHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHcchhHHH-HHHHHHHH
Confidence 223456778899998877766666555444444333344444444333333 44444555555555443 46666653
No 21
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.03 E-value=3.2e-07 Score=96.40 Aligned_cols=231 Identities=15% Similarity=0.138 Sum_probs=151.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhcc
Q 017012 66 LFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQ 145 (379)
Q Consensus 66 l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (379)
+..+..+-.++++++.|.+.| |++|||++..+-...++..++.+++...+.. +
T Consensus 50 v~~a~~LP~~Llsl~aG~laD--r~drrrili~~~~~~~~~~~~L~~l~~~~~~-------------------------~ 102 (524)
T PF05977_consen 50 VQAASTLPILLLSLFAGALAD--RFDRRRILILSQLLRALVALLLAVLAFFGLL-------------------------S 102 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhh--cccchHHHHHHHHHHHHHHHHHHHHHHhCcC-------------------------C
Confidence 344556667889999999999 9999999988887765555555444322200 0
Q ss_pred CCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HH
Q 017012 146 GSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FL 224 (379)
Q Consensus 146 ~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~ 224 (379)
.| ... ++=...+..+.+.....-+.+.|+.+.||-++--++.+.+.++.-++||.++|.+. .+
T Consensus 103 -------~~-----~Ll----~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~ 166 (524)
T PF05977_consen 103 -------PW-----LLL----ILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFF 166 (524)
T ss_pred -------HH-----HHH----HHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 24 221 12223455566777788899999999999999999999999999999999999875 67
Q ss_pred hH-HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHH
Q 017012 225 GP-YLLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLR 303 (379)
Q Consensus 225 g~-~lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 303 (379)
|+ ..+++-+++.++++.+ +.++..+. ++++ . .+++...++.+|+|
T Consensus 167 G~~~~f~inalsfl~~i~~---l~~~~~~~-------------~~~~---~---------------~~e~~~~~l~~G~r 212 (524)
T PF05977_consen 167 GAAAAFLINALSFLISILA---LLRWKPPP-------------PPSS---L---------------PRERFFSALREGLR 212 (524)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHccccc-------------cccc---c---------------chhhhhhhHHHHHH
Confidence 76 4555444433333332 22221110 0000 0 01223347899999
Q ss_pred HHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 304 LIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 304 ~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
++.++|.++.+.....++++...-+.-..--++++.+... ...+|.+.++.|+-.++--++. +++-++++
T Consensus 213 yv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~---a~~yGll~a~~gvGai~Gal~~-~~l~~~~~ 282 (524)
T PF05977_consen 213 YVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGG---ASGYGLLLAAFGVGAILGALLL-PRLRRRLS 282 (524)
T ss_pred HHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCc---HHHHHHHHHHHHHHHHHHHHHH-HHhhcccC
Confidence 9999999988777666666654444333344455555433 4567999999999988887765 67776654
No 22
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.03 E-value=5.1e-07 Score=90.94 Aligned_cols=157 Identities=13% Similarity=0.141 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhhcc-cC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHH
Q 017012 31 LHSSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSL 107 (379)
Q Consensus 31 l~~~l~~F~il~~y~ilrpird~l~vs-~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~ 107 (379)
..++..-|+...+++..-|.-..-..+ .| ...+..+.........+..|+.|+++| |++||+++.+.....++..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~d--r~g~k~~l~~~~~~~~~~~ 90 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIAD--RFGAKPMIVTGMLMRAAGF 90 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHH--HhCchHHHHHHHHHHHHHH
Confidence 344455667777777777776554443 34 334444454445566777899999999 9999999877766665555
Q ss_pred HHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017012 108 LVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARV 187 (379)
Q Consensus 108 llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~ 187 (379)
+++.+. . + .| |++. .+. ..............+.+
T Consensus 91 ~~~~~~---~--------------------~--------------~~----~l~~--~~~---l~g~~~~~~~~~~~~~~ 124 (400)
T PRK11646 91 ATMAIA---H--------------------E--------------PW----LLWL--SCI---LSGLGGTLFDPPRTALV 124 (400)
T ss_pred HHHHHh---c--------------------c--------------HH----HHHH--HHH---HHHHHHHHHHHHHHHHH
Confidence 444321 1 0 23 1221 111 12222223334456778
Q ss_pred HhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHhH-HHHHHHHHH
Q 017012 188 IDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFLGP-YLLLFAACL 235 (379)
Q Consensus 188 ~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~~g~-~lll~aa~l 235 (379)
.|.++.|+..|.+|+...+.++|.++||.+++.+...|. +.+.+.++.
T Consensus 125 ~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~ 173 (400)
T PRK11646 125 IKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVL 173 (400)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 999999999999999999999999999999999886664 344443433
No 23
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.01 E-value=4.8e-07 Score=93.95 Aligned_cols=271 Identities=13% Similarity=0.042 Sum_probs=151.0
Q ss_pred cCcCchhHHHHHHHHHHHHHHHHHHhhhccchhhcccCcc--chhHHHHHHHHHHHHHHHHHHHhhcCCCC-----Cchh
Q 017012 22 LHPHETSALLHSSSCFFFILSAYFVVLPLRDEGAISLGLS--KLPGLFVGSLILTLIAAPVSTLIFSLPNL-----SKAK 94 (379)
Q Consensus 22 i~~~E~~~~l~~~l~~F~il~~y~ilrpird~l~vs~Gae--~lp~l~~~~~~~~ll~~~iy~~L~~~~r~-----~r~r 94 (379)
++..+.+|...++...|.....+.+.-+.-....-..|.+ .+-.+..... ..++.++.+.++| |+ ||||
T Consensus 6 l~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~--~~~~~~l~gpl~D--r~~~~~~Grrr 81 (491)
T PRK11010 6 LRIFQQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQ--AYVFKFLWSPLMD--RYTPPFLGRRR 81 (491)
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--HHHHHHHHHHHHH--cccccCCCCch
Confidence 3444666777788887777777777777655554444555 3444322222 2368899999999 88 8888
Q ss_pred H-HHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHH
Q 017012 95 A-LVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVA 173 (379)
Q Consensus 95 v-~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~ 173 (379)
. +.......++.....++. .+. . + .| |++ +.++...
T Consensus 82 ~~ll~~~i~~~~~~~~~a~~-~~~-~------------------~--------------l~----~l~-----~~~~l~~ 118 (491)
T PRK11010 82 GWLLATQLLLLVAIAAMGFL-EPG-T------------------Q--------------LR----WLA-----ALAVVIA 118 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCc-c------------------h--------------HH----HHH-----HHHHHHH
Confidence 5 444444443343333331 000 0 0 22 122 2333345
Q ss_pred HHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHH-H-hH-HHHHHHHHHHHHHHHHHHHHhhhc
Q 017012 174 LLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF-L-GP-YLLLFAACLMELAAQSSKGIYKEI 250 (379)
Q Consensus 174 v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~-~-g~-~lll~aa~ll~l~~~~~~~l~~~~ 250 (379)
...........++++|.++.||+.|..++...|..+|.++|+.++..+.. . |- ..+.+.+++..++....+. .+
T Consensus 119 ~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~-- 195 (491)
T PRK11010 119 FCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-AP-- 195 (491)
T ss_pred HHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-cC--
Confidence 55555666789999999999999999999999999999999998888874 3 54 2444433333333332211 11
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHH
Q 017012 251 PRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYF 330 (379)
Q Consensus 251 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~ 330 (379)
+. | + .+ + .+ + + .++ ...+.++.++++|....+.+..+++.........
T Consensus 196 e~------~----~--~~-~---~~----~-----~----~~~---~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~ 243 (491)
T PRK11010 196 EP------T----D--TI-P---VP----K-----T----LEQ---AVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMS 243 (491)
T ss_pred CC------c----c--cc-c---cc----c-----c----hhh---hHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHH
Confidence 10 0 0 00 0 00 0 0 000 1234566677777665555555555544433332
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 331 QKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 331 ~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
....+..+...-+.+ -.|.+....+.+..++..++.|++.+|+|
T Consensus 244 ~~~~~l~~~~G~s~~---~~g~~~~~~g~i~~iiG~ll~G~L~dr~g 287 (491)
T PRK11010 244 LTTTFLIRGVGFDAG---EVGLVNKTLGLLATIVGALYGGILMQRLS 287 (491)
T ss_pred HHHHHHHHhcCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 223333332322222 23555555555555556667789999887
No 24
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.01 E-value=2.8e-07 Score=90.31 Aligned_cols=169 Identities=15% Similarity=0.042 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHh--------HH-HHHHHHHHHHHHH
Q 017012 171 WVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG--------PY-LLLFAACLMELAA 240 (379)
Q Consensus 171 w~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g--------~~-lll~aa~ll~l~~ 240 (379)
..+...........+++.|.++.||+.+..|+.++|.++|.++|+.+++.+. +.| .. .+++.+++..++.
T Consensus 92 ~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~ 171 (356)
T TIGR00901 92 LIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGL 171 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHH
Confidence 3444455555678889999999999999999999999999999999988876 555 32 4455444443333
Q ss_pred HHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchh---HHHHHHH
Q 017012 241 QSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNY---LLSVSLF 317 (379)
Q Consensus 241 ~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~y---L~~i~~~ 317 (379)
...+...++.. +.+ +. + ++.+.+..++++.++++|. +..+.+.
T Consensus 172 ~~~~~~~~e~~----------------~~~--~~-----------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (356)
T TIGR00901 172 LVTLFLAKEPQ----------------EDA--SV-----------P-----KPLTQAVLKPIREFFQRKNMIQALLLLLL 217 (356)
T ss_pred HHHHHhccCCC----------------ccc--cc-----------c-----hhHHHHHHHHHHHHHHhcCchHHHHHHHH
Confidence 32221111100 000 00 0 0001135677888888885 5444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 318 LWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 318 v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
.+++......++-....+.++ ..-+. +-.|.+....+.+..+++.+..+++.+|+|
T Consensus 218 ~~~~~~~~~~~~~~~~~~l~~-~g~~~---~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g 273 (356)
T TIGR00901 218 IVLYKLGDSAATVLTTLFLLD-MGFSK---EEIALVAKINGLLGAILGGLIGGIIMQPLN 273 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCCH---HHHHHHhHHHHHHHHHHHHHHHHHHHhhhh
Confidence 444444333333233333333 22221 234667777776666777778889999887
No 25
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.99 E-value=6.7e-07 Score=90.86 Aligned_cols=124 Identities=11% Similarity=0.046 Sum_probs=81.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchh
Q 017012 62 KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKA 141 (379)
Q Consensus 62 ~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (379)
..-++.........+..++.|+++| |++||+++.+....+.+..+++++.- +
T Consensus 59 ~~g~~~~~~~~~~~~~~~~~G~l~d--r~g~r~~~~~~~~~~~~~~~~~~~~~--~------------------------ 110 (434)
T PRK11663 59 DIGLLATLFYITYGVSKFVSGIVSD--RSNARYFMGIGLIATGIINILFGFSS--S------------------------ 110 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHh--hcCCchhHHHHHHHHHHHHHHHHHHh--H------------------------
Confidence 3444455556678889999999999 99999988776666555444443311 0
Q ss_pred hhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 142 AVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 142 ~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~l 221 (379)
.| .+. +.++...............+++|.++.+|..+..|+...+.++|.++|+.+.+.+
T Consensus 111 -----------~~-----~l~----~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l 170 (434)
T PRK11663 111 -----------LW-----AFA----LLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAI 170 (434)
T ss_pred -----------HH-----HHH----HHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12 111 1111122222222234567899999999999999999999999999999988887
Q ss_pred H-HHhH-HHHHHHH
Q 017012 222 A-FLGP-YLLLFAA 233 (379)
Q Consensus 222 a-~~g~-~lll~aa 233 (379)
. ..|. +.+++.+
T Consensus 171 ~~~~gw~~~f~~~~ 184 (434)
T PRK11663 171 ALHYGWRYGMMIAG 184 (434)
T ss_pred HHcccHHHHHHHHH
Confidence 6 4564 3444433
No 26
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.98 E-value=1.3e-06 Score=87.70 Aligned_cols=148 Identities=11% Similarity=0.083 Sum_probs=97.5
Q ss_pred HHHHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHh
Q 017012 38 FFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQ 115 (379)
Q Consensus 38 F~il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~ 115 (379)
|+....-+..-|.-+.+.-+.| .++.-+..........+..|+.|+++| |++|||++......+++..+++.+.
T Consensus 30 ~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~D--r~grr~~~~~~~~~~~~~~~~~~~~-- 105 (394)
T PRK10213 30 ACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQ--ATDRRYVVILFAVLLTLSCLLVSFA-- 105 (394)
T ss_pred HHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccCcHHHHHHHHHHHHHHHHHHHHH--
Confidence 3344443333334333333333 344555555667778889999999999 9999999988887776655554331
Q ss_pred hhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Q 017012 116 SSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSES 195 (379)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~e 195 (379)
.+ .| +.++ .|+ +.++.........-++++|.++.+|
T Consensus 106 ~~-----------------------------------~~----~l~~--~r~---l~G~~~g~~~~~~~~~i~~~~~~~~ 141 (394)
T PRK10213 106 NS-----------------------------------FS----LLLI--GRA---CLGLALGGFWAMSASLTMRLVPPRT 141 (394)
T ss_pred Ch-----------------------------------HH----HHHH--HHH---HHHHhhHHHHHHHHHHHHHHcCHhH
Confidence 11 23 1121 122 2344444455577788999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHH
Q 017012 196 GSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAA 233 (379)
Q Consensus 196 akR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa 233 (379)
+.+..++...+.++|.++||.+++.+. .+|. +.+.+.+
T Consensus 142 ~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~ 181 (394)
T PRK10213 142 VPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAA 181 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHH
Confidence 999999999999999999999999887 4564 3444433
No 27
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.98 E-value=2e-07 Score=93.67 Aligned_cols=260 Identities=12% Similarity=0.042 Sum_probs=139.0
Q ss_pred HHHHHHHHHHHHHhhhccchhhcc--cCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHH
Q 017012 34 SSCFFFILSAYFVVLPLRDEGAIS--LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFF 111 (379)
Q Consensus 34 ~l~~F~il~~y~ilrpird~l~vs--~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa 111 (379)
++..|+..++..+.-+.-..+..+ .+..+..++.....+..++..++.|+++| |++|||++.+....+++.++..+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~d--r~g~~~~l~~~~~~~~~~~~~~~ 100 (417)
T PRK10489 23 FIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLAD--RYDRKKLILLARGTCGLGFIGLA 100 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhh--hcCCceEEEehHHHHHHHHHHHH
Confidence 333444445555554444444333 23444555666667788899999999999 99999987765544444444333
Q ss_pred HHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017012 112 LLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVM 191 (379)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~ 191 (379)
........ + .|. +++ ..+.............-..+.|.+
T Consensus 101 ~~~~~~~~-------------------------~-------~~~----l~~-----~~~~~g~~~~~~~~~~~~~~~~~~ 139 (417)
T PRK10489 101 LNAFLPEP-------------------------S-------LLA----IYL-----LGLWDGFFGSLGVTALLAATPALV 139 (417)
T ss_pred HHHHcCCC-------------------------c-------HHH----HHH-----HHHHHHHHHHHHHHHHhhhhhhcc
Confidence 21110100 0 121 111 111122222223334455688999
Q ss_pred CccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCC
Q 017012 192 DSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRS 269 (379)
Q Consensus 192 ~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~ 269 (379)
+.++..|..++...+.++|.++|+.+++.+. ..+. +.+.+.+++..++..+... ..+. + ++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~-----~--------~~~ 203 (417)
T PRK10489 140 GRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLR---LPAL-----P--------PPP 203 (417)
T ss_pred CHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh---CCCC-----C--------CCC
Confidence 9999999999999999999999999999876 4454 3444433333333333221 1110 0 000
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHH
Q 017012 270 GADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRL 349 (379)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf 349 (379)
+ +. +++ ..+..++++.++++|.+..+.+..++..... -.+...-.+.++.+..+.+.
T Consensus 204 ~--~~----------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~g~~~~~--- 260 (417)
T PRK10489 204 Q--PR----------------EHP-LRSLLAGFRFLLASPVVGGIALLGGLLTMAS-AVRVLYPALADEVWQMGAAQ--- 260 (417)
T ss_pred c--cc----------------ccc-hHHHHHHHHHHHcChHHHHHHHHHHHHHHHH-hHHHhhHHHHHhccCCChhH---
Confidence 0 00 001 1145677889999999866544433332221 12222233344433333222
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 017012 350 LAEINSFIAVFILAGQLTLTGTSFLLL 376 (379)
Q Consensus 350 ~G~~~~~~gv~~l~~qlf~t~~llrrl 376 (379)
.|.+....++..++.+.+ .+++.+|.
T Consensus 261 ~g~~~~~~~~g~~ig~~~-~~~l~~~~ 286 (417)
T PRK10489 261 IGLLYAAVPLGAALGALT-SGWLAHSA 286 (417)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHhhhcc
Confidence 355666666666666654 46776653
No 28
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.97 E-value=6.5e-07 Score=88.03 Aligned_cols=155 Identities=15% Similarity=0.099 Sum_probs=104.9
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHhhhccchhhcccCc--cchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHH
Q 017012 23 HPHETSALLHSSSCFFFILSAYFVVLPLRDEGAISLGL--SKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIH 100 (379)
Q Consensus 23 ~~~E~~~~l~~~l~~F~il~~y~ilrpird~l~vs~Ga--e~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~ 100 (379)
+++.++.+...++..++.-+...+.-++-+.+.-+.|. +..-++.........+..|+.|+++| |++||+++.+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~D--r~g~r~~~~~~~ 84 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGD--RYGRRLPMVTSI 84 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHH--HhccHHHHHHHH
Confidence 45556666777777777877888777777766544443 34455555667788899999999999 999999887765
Q ss_pred HHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHH
Q 017012 101 RFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITI 180 (379)
Q Consensus 101 ~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~ 180 (379)
...++..+++++. + + .|. ++. .|. ...+......
T Consensus 85 ~~~~~~~~~~~~~-----~------------------~--------------~~~----l~~--~~~---l~G~~~~~~~ 118 (405)
T TIGR00891 85 VLFSAGTLACGFA-----P------------------G--------------YIT----MFI--ARL---VIGIGMGGEY 118 (405)
T ss_pred HHHHHHHHHHHHh-----c------------------c--------------HHH----HHH--HHH---HHHhhhhhhh
Confidence 5544443333321 0 0 121 111 111 1222223333
Q ss_pred HHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHh
Q 017012 181 SSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 225 (379)
Q Consensus 181 slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g 225 (379)
....++++|.++.+|+.|.+++...+.++|.++|+.+++.+. ..+
T Consensus 119 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 164 (405)
T TIGR00891 119 GSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 456778999999999999999999999999999999988876 344
No 29
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.97 E-value=2.8e-07 Score=104.41 Aligned_cols=267 Identities=9% Similarity=-0.044 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhc-c-cCcc------chhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHH
Q 017012 29 ALLHSSSCFFFILSAYFVVLPLRDEGAI-S-LGLS------KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIH 100 (379)
Q Consensus 29 ~~l~~~l~~F~il~~y~ilrpird~l~v-s-~Gae------~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~ 100 (379)
.+.+++...|+..++-++.+-.--.+.+ . .+.. ..-....+.++..+++.|+.|+++| |++|||++..+.
T Consensus 12 ~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laD--r~~rk~~~~~~~ 89 (1140)
T PRK06814 12 RFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLAD--KYDKAKLAKILK 89 (1140)
T ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhh--hccHHHHHHHHH
Confidence 4556666677777776655433222322 1 1111 1222233445677899999999999 999999865433
Q ss_pred HHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHH
Q 017012 101 RFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITI 180 (379)
Q Consensus 101 ~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~ 180 (379)
..-++. .+.+...... . + .| ++++. +. ..++.+.+..
T Consensus 90 ~~~~~~-~~~~~~~~~~-~-------------------------s-------~~----~l~~~--~~---l~gi~~a~~~ 126 (1140)
T PRK06814 90 FAEIGI-AALAIYGFHL-N-------------------------S-------VP----LLFAA--LF---LMGIHSALFG 126 (1140)
T ss_pred HHHHHH-HHHHHHHHHH-h-------------------------h-------HH----HHHHH--HH---HHHHHHHhhc
Confidence 221111 1111111111 0 0 23 12221 22 2344455566
Q ss_pred HHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHH-HhHH-HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 017012 181 SSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF-LGPY-LLLFAACLMELAAQSSKGIYKEIPRRPEELP 258 (379)
Q Consensus 181 slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~-~g~~-lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~ 258 (379)
...-+.+.|+++.+|..+..|+.+++.++|.++||.+++++.. .|.. .+...+++..++.++.+. ..+. +
T Consensus 127 p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~ 198 (1140)
T PRK06814 127 PIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLF----IPKT----G 198 (1140)
T ss_pred hHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhh----CCCC----C
Confidence 6788899999999999999999999999999999999999874 3433 332222222222222111 1110 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017012 259 PLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAM 338 (379)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~ 338 (379)
++.. .. + + +.....+..++++.+.++|.++.+.+..++..+....+....-.++++
T Consensus 199 --------~~~~---~~----~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 254 (1140)
T PRK06814 199 --------NAAP---DL----K--------I-DRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKE 254 (1140)
T ss_pred --------CCCC---CC----e--------e-ccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 0000 00 0 0 001111456789999999999887776655544433333333444455
Q ss_pred hcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 017012 339 TVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLL 376 (379)
Q Consensus 339 ~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrl 376 (379)
.+..+. ...|.+.++.++..++.+++. |++.++.
T Consensus 255 ~~g~~~---~~~g~~~~~~~~g~~ig~~~~-g~l~~~~ 288 (1140)
T PRK06814 255 TLGGDE---NVATLFLAVFSVGVAVGSFLA-SKLSEGR 288 (1140)
T ss_pred HcCCch---HHHHHHHHHHHHHHHHHHHHH-HHHhCCc
Confidence 544332 334777777777777777755 6777543
No 30
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.95 E-value=1.2e-06 Score=88.06 Aligned_cols=154 Identities=15% Similarity=0.085 Sum_probs=95.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccchhhcc--cCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHH
Q 017012 28 SALLHSSSCFFFILSAYFVVLPLRDEGAIS--LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSV 105 (379)
Q Consensus 28 ~~~l~~~l~~F~il~~y~ilrpird~l~vs--~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~ 105 (379)
+.+....+..|+...+++...+.-+.+.-+ .+.++..++.........+..|+.|+++| |++|||++......+.+
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d--r~g~k~~l~~~~~~~~~ 90 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAE--IIGPLKTMMIGLLLWCV 90 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHH--HcCcHHHHHHHHHHHHH
Confidence 345666666666666666555544444323 34556667766667788899999999999 99999998887666655
Q ss_pred HHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Q 017012 106 SLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWA 185 (379)
Q Consensus 106 ~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~ 185 (379)
..+++... ..... + .| ... +.+....+-........-.
T Consensus 91 ~~~~~~~~-~~~~~------------------~--------------~~-----~l~----~~~~i~G~g~~~~~~~~~~ 128 (402)
T TIGR00897 91 GHAAFIVF-GLGHA------------------N--------------YP-----LIL----LFYGIRGLGYPLFAYSFLV 128 (402)
T ss_pred HHHHHHHH-hccCc------------------c--------------HH-----HHH----HHHHHHHcchHHHHhHHHH
Confidence 54433211 00000 0 12 111 1111112111112223345
Q ss_pred HHHhhcCccchhHHHHHHHHHHHHHH-HHhHHHHHHHH-HHh
Q 017012 186 RVIDVMDSESGSRLFGFIGAGATLGQ-LFGSLFAAGMA-FLG 225 (379)
Q Consensus 186 ~~~di~~~~eakR~fgligag~~lG~-I~G~~l~~~la-~~g 225 (379)
.+.|.++.||+.|..|+..++.++|. ++|+.+++.+. .+|
T Consensus 129 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g 170 (402)
T TIGR00897 129 WVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG 170 (402)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 56788899999999999999999996 68998887765 455
No 31
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.94 E-value=1.6e-06 Score=89.94 Aligned_cols=157 Identities=12% Similarity=0.081 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q 017012 29 ALLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (379)
Q Consensus 29 ~~l~~~l~~F~il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~ 106 (379)
.+..+.+..|+.....+++-..-+++.-+.| .++..|+..+..+...+..|++|+++| |++||+++.+....+++.
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D--~~Grk~~l~~~~~~~~~~ 84 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGD--RIGFKRLLMLGGTLFGLA 84 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHH--HhccHHHHHHHHHHHHHH
Confidence 3455666678888887777777777766644 467888877777777888999999999 999999998888877766
Q ss_pred HHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 017012 107 LLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWAR 186 (379)
Q Consensus 107 ~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~ 186 (379)
.+++++.- + .| .++ ++|.+ ..+-........-..
T Consensus 85 ~~~~~~a~--~-----------------------------------~~-----~li-~~r~l---~G~g~~~~~~~~~~~ 118 (495)
T PRK14995 85 SLAAAFSP--T-----------------------------------AS-----WLI-ATRAL---LAIGAAMIVPATLAG 118 (495)
T ss_pred HHHHHHcC--C-----------------------------------HH-----HHH-HHHHH---HHHHHHHHHHHHHHH
Confidence 66655420 0 12 222 22332 222222233333444
Q ss_pred HHhhc-CccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHH
Q 017012 187 VIDVM-DSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAA 233 (379)
Q Consensus 187 ~~di~-~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa 233 (379)
+.+.+ +.+|+.|.+|+.+++.++|.++||.+++.+. +.|. +.+++.+
T Consensus 119 l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~ 168 (495)
T PRK14995 119 IRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINV 168 (495)
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHH
Confidence 55554 6788999999999999999999999999987 4553 3444433
No 32
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.94 E-value=6.6e-07 Score=100.97 Aligned_cols=231 Identities=13% Similarity=-0.005 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCC
Q 017012 69 GSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGST 148 (379)
Q Consensus 69 ~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (379)
+.++..+++.|+.|+++| |++||+++.+.....++..++..+..... .
T Consensus 55 ~~~l~~~l~~~~~G~l~D--r~grk~~l~~~~~~~~~~~~~~~~~~~~~---------------------------~--- 102 (1146)
T PRK08633 55 LFLLPFLLLSSPAGFLAD--KFSKNRVIRIVKLFEVGLTLLIVLAYYLG---------------------------W--- 102 (1146)
T ss_pred HHHHHHHHHhhhHhhhcc--cccHHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------c---
Confidence 445567888999999999 99999988776554433333332222111 0
Q ss_pred CCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH----
Q 017012 149 ANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFL---- 224 (379)
Q Consensus 149 ~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~~---- 224 (379)
.| .+. ++.+..++...+......++++|+++.+|..+.+|+.+++.++|.++|+.+++++...
T Consensus 103 ----~~-----~l~----~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~ 169 (1146)
T PRK08633 103 ----FW-----LAF----AVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGN 169 (1146)
T ss_pred ----HH-----HHH----HHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 12 111 1112233334445556778999999999999999999999999999999999988633
Q ss_pred -----h-H-HHH-HHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCccc
Q 017012 225 -----G-P-YLL-LFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLW 296 (379)
Q Consensus 225 -----g-~-~ll-l~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (379)
+ . +.+ +...++..+++..... ..+.. .. +.. ..+ + + ++....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------~~------~~~--~~~----~--------~-~~~~~~ 219 (1146)
T PRK08633 170 TPSEILGRIAPAGLVLLAVAVLGLIFAYR---LPKVP------AA------APE--VFD----K--------K-KYLFPK 219 (1146)
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHhc---CcCCC------CC------Ccc--ccc----c--------c-ccccHH
Confidence 2 1 222 2222222122221111 11110 00 000 000 0 0 001112
Q ss_pred chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 017012 297 AILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLL 376 (379)
Q Consensus 297 ~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrl 376 (379)
...++++.++++|.+....+...++.............+..+.+..+.. ...|.+....++..++.+.+ .+++.+|+
T Consensus 220 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~--~~~g~~~~~~~ig~~~g~~~-~g~l~~r~ 296 (1146)
T PRK08633 220 LLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNT--FQVQYLLAASAIGIGIGSLL-AGRLSGRH 296 (1146)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcH--HHHHHHHHHHHHHHHHHHHH-HHHHhCCc
Confidence 4567889999999987655544444433333333333344444433222 13366666676666666654 57888886
Q ss_pred C
Q 017012 377 G 377 (379)
Q Consensus 377 G 377 (379)
|
T Consensus 297 ~ 297 (1146)
T PRK08633 297 I 297 (1146)
T ss_pred e
Confidence 5
No 33
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.94 E-value=5.3e-07 Score=89.81 Aligned_cols=260 Identities=12% Similarity=0.078 Sum_probs=137.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhccc--CccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q 017012 29 ALLHSSSCFFFILSAYFVVLPLRDEGAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (379)
Q Consensus 29 ~~l~~~l~~F~il~~y~ilrpird~l~vs~--Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~ 106 (379)
...|..+.+|+..+++.+.-|.-....-+. +.+.+-++.........+..|+.|.++| |++|++..........
T Consensus 5 ~~~~~~~~~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~d--r~g~~~~~~~~~~~~~-- 80 (382)
T PRK11128 5 PTRWLALSYFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVK--DPSQLIPALRLLALLT-- 80 (382)
T ss_pred ccHHHHHHHHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHh--hhcchHHHHHHHHHHH--
Confidence 455667778888899999999766555453 3445555665667788899999999999 9999532221111111
Q ss_pred HHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 017012 107 LLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWAR 186 (379)
Q Consensus 107 ~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~ 186 (379)
.++........+ + .|. +++ + +. ..............+.
T Consensus 81 -~~~~~~~~~~~~-------------------------~-------~~~----l~i-~-~~---l~g~~~~~~~~~~~a~ 118 (382)
T PRK11128 81 -LLFAVAFWFGAH-------------------------S-------FWL----LFV-A-IG---LFNLFFSPLVPLTDAL 118 (382)
T ss_pred -HHHHHHHHHhcc-------------------------c-------HHH----HHH-H-HH---HHHHHHcccccHHHHH
Confidence 111111111100 0 341 111 0 11 1122222333455666
Q ss_pred HHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhHH-HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCC
Q 017012 187 VIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGPY-LLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKAD 264 (379)
Q Consensus 187 ~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~~-lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~ 264 (379)
+.|. .+|..|-+|....++++|..+||.+++.+. ++|.. .+++.++...+...+ .+. ..+. +
T Consensus 119 ~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~--~~~-~~~~-----~------ 182 (382)
T PRK11128 119 ANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLG--QLL-RPTI-----M------ 182 (382)
T ss_pred HHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHH--HHc-cCCC-----C------
Confidence 7775 456678899999999999999999999987 56753 444433333233222 111 1110 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 017012 265 SDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSL 344 (379)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~ 344 (379)
++.+ .+ + + ++ +..++++.++++|.++.+.+..++.+......+.....+..+.--+++
T Consensus 183 --~~~~---~~----~--------~-~~----~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~ 240 (382)
T PRK11128 183 --PQGE---SR----Q--------Q-ES----AGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSAS 240 (382)
T ss_pred --Cccc---cc----c--------c-cc----cccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHh
Confidence 0000 00 0 0 00 112457788999988776665555443332222211222233222322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 345 GRRRLLAEINSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 345 ~~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
+ .|.+.....+.. +.+.+..+++.+|+|
T Consensus 241 ~----~g~~~~~~~~~~-~~~~~~~g~l~~r~~ 268 (382)
T PRK11128 241 T----IGYLWSLGVVAE-VLIFAFSNRLFRRWS 268 (382)
T ss_pred H----HHHHHHHHHHHH-HHHHHHHHHHHHHCC
Confidence 2 355555444444 444456789999987
No 34
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.93 E-value=1.5e-06 Score=87.93 Aligned_cols=152 Identities=12% Similarity=0.069 Sum_probs=93.0
Q ss_pred HHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhh
Q 017012 40 ILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSS 117 (379)
Q Consensus 40 il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~ 117 (379)
...+-.+..|.-+.+.-+.| .....+.....+....+..++.|+++| |++||+++......+.+..+++++.
T Consensus 28 ~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~d--r~Grr~~l~~~~~~~~~~~~~~~~a---- 101 (413)
T PRK15403 28 AYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSD--RIGRRPVLITGALIFTLACAATLFT---- 101 (413)
T ss_pred HHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHH--HcCchHHHHHHHHHHHHHHHHHHHc----
Confidence 33344455554433322322 333455444446677788899999999 9999998887766655444444331
Q ss_pred cccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchh
Q 017012 118 SIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGS 197 (379)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eak 197 (379)
. + .| ++++ .|.+ .++.........+..+.|.++.+|+.
T Consensus 102 -~-------------------------~-------~~----~l~~--~r~l---~Gi~~~~~~~~~~~~~~~~~~~~~~~ 139 (413)
T PRK15403 102 -T-------------------------S-------MT----QFLI--ARFI---QGTSICFIATVGYVTVQEAFGQTKGI 139 (413)
T ss_pred -C-------------------------C-------HH----HHHH--HHHH---HHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 0 0 12 1221 2332 12222223335568899999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHH
Q 017012 198 RLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELA 239 (379)
Q Consensus 198 R~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa~ll~l~ 239 (379)
|..++++.+.++|.++|+.+++.+. +.|. +.+.+.+++..++
T Consensus 140 ~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~ 183 (413)
T PRK15403 140 KLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIA 183 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 9999999999999999999988876 4454 3444434333333
No 35
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.91 E-value=9.2e-07 Score=89.96 Aligned_cols=154 Identities=11% Similarity=0.117 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSL 107 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~ 107 (379)
+....+..|+...+..+..+.-+.+.-+.| .++..|+.........+..|+.|+++| |++||+++.+....+.+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAK--RFGTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHH--HhCcHHHHHHHHHHHHHHH
Confidence 344555667777777777777766665544 456777777777888999999999999 9999999877665555444
Q ss_pred HHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017012 108 LVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARV 187 (379)
Q Consensus 108 llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~ 187 (379)
+++++ . . + .| .+. +.|. ...+.........+.++
T Consensus 82 ~~~~~----~-~------------------~--------------~~-----~l~-~~~~---~~G~~~~~~~~~~~~~i 115 (485)
T TIGR00711 82 LLCGV----A-P------------------N--------------LE-----LMI-IFRV---IQGFGGGPLIPLSFSTL 115 (485)
T ss_pred HHHhC----c-C------------------C--------------HH-----HHH-HHHH---HHHhhhhhHHHHHHHHH
Confidence 43332 1 0 0 12 111 1122 22333444556788999
Q ss_pred HhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHH
Q 017012 188 IDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLF 231 (379)
Q Consensus 188 ~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~ 231 (379)
.|.++.+|+.+.+|+.+.+.++|.++|+.+++.+. +.|. +.+.+
T Consensus 116 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~ 161 (485)
T TIGR00711 116 LNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLI 161 (485)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhh
Confidence 99999999999999999999999999999998886 4453 34443
No 36
>TIGR00895 2A0115 benzoate transport.
Probab=98.91 E-value=6.5e-07 Score=87.51 Aligned_cols=152 Identities=16% Similarity=0.052 Sum_probs=96.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHH
Q 017012 27 TSALLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFS 104 (379)
Q Consensus 27 ~~~~l~~~l~~F~il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~ 104 (379)
.+.++..++..|+....+...-+.-+.+.-..| .+...++........++..++.|+++| |++||+++.+......
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d--~~g~~~~~~~~~~~~~ 93 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLAD--RIGRKRVLLWSILLFS 93 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHH--HhhhHHHHHHHHHHHH
Confidence 333444444455554445544444444433333 344556666666778888999999999 9999998877665544
Q ss_pred HHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q 017012 105 VSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTW 184 (379)
Q Consensus 105 ~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW 184 (379)
+..+++++ . . + .| .+. +..+.............+
T Consensus 94 ~~~~~~~~----~-~------------------~--------------~~-----~~~----~~~~~~g~~~~~~~~~~~ 127 (398)
T TIGR00895 94 VFTLLCAL----A-T------------------N--------------VT-----QLL----ILRFLAGLGLGGLMPNLN 127 (398)
T ss_pred HHHHHHHH----c-c------------------c--------------hH-----HHH----HHHHHHhcccccchhhHH
Confidence 44433332 1 0 0 12 111 111122222334455788
Q ss_pred HHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH
Q 017012 185 ARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 185 ~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~ 226 (379)
++++|.++.+++.+.+|+...+.++|.++|+.+++.+. ..|.
T Consensus 128 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~ 170 (398)
T TIGR00895 128 ALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW 170 (398)
T ss_pred HHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccc
Confidence 99999999999999999999999999999999988876 4453
No 37
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.90 E-value=1.5e-06 Score=86.66 Aligned_cols=260 Identities=12% Similarity=0.073 Sum_probs=140.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSL 107 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~ 107 (379)
..++.+.+|+...++.+.-|.-....-+.| .+++.++.........+..|+.+.++| |++|+......... ..
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d--~~~~~~~~~~~~~~---~~ 80 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIK--DANHIIIALRLLAL---AS 80 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCcHHHHHHHHHH---HH
Confidence 345677788888889999997666665544 444555555667788899999999999 99985443222211 11
Q ss_pred HHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017012 108 LVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARV 187 (379)
Q Consensus 108 llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~ 187 (379)
.++.+.+..... + .| .+. +.++.............-+++
T Consensus 81 ~l~~~~~~~~~~------------------~--------------~~-----~l~----~~~~l~~~~~~~~~p~~~al~ 119 (382)
T TIGR00902 81 AIFAAAFSAGAH------------------N--------------AW-----LLF----IAIGLFALFFSAGMPIGDALA 119 (382)
T ss_pred HHHHHHHHHhhh------------------h--------------HH-----HHH----HHHHHHHHHHccchhHHHHHH
Confidence 222222211100 0 23 221 112112222222333444555
Q ss_pred HhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhHH-HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCC
Q 017012 188 IDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGPY-LLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADS 265 (379)
Q Consensus 188 ~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~~-lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~ 265 (379)
.|. .+|..|.||.+..++++|.++||.+++.+. ++|.. .+.+.+++..+.... .+. .++. +
T Consensus 120 ~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~~--~~~--~~~~----~------- 182 (382)
T TIGR00902 120 NTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLIG--FLI--KPTI----P------- 182 (382)
T ss_pred HHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHH--HHc--CCCC----C-------
Confidence 543 466778899999999999999999988887 55653 333222222111111 111 1110 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHH
Q 017012 266 DPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLG 345 (379)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~ 345 (379)
++++ ++. +++ +..+.++.++|+|.+..+.+..++........+-....+.++ ...+++
T Consensus 183 -~~~~-~~~----------------~~~---~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~ 240 (382)
T TIGR00902 183 -PKDA-IPE----------------DES---QGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISAS 240 (382)
T ss_pred -CCcc-ccc----------------ccc---ccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHh
Confidence 0000 000 000 112235678888988777666666554433333322233333 333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCC
Q 017012 346 RRRLLAEINSFIAVFILAGQLTLTGTSFLLLGL 378 (379)
Q Consensus 346 ~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG~ 378 (379)
.. |.... .+.+.-+.+.+..+++.+|+|.
T Consensus 241 ~~---g~l~~-~~~~~~i~~~~~~~~l~~r~g~ 269 (382)
T TIGR00902 241 AT---GLLWG-IGVLAEIIIFAFSNKLFQNCSA 269 (382)
T ss_pred HH---HHHHH-HHHHHHHHHHHHhHHHHhhCCH
Confidence 33 55554 4666667777788999999873
No 38
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.89 E-value=2.6e-06 Score=83.14 Aligned_cols=142 Identities=14% Similarity=0.138 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHhhhccch-hhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHH
Q 017012 33 SSSCFFFILSAYFVVLPLRDE-GAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLV 109 (379)
Q Consensus 33 ~~l~~F~il~~y~ilrpird~-l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~ll 109 (379)
..+.+++....++..-|+-+. +.-+.| .+...++.........+..++.|+++| |++||+.+.+......+..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~~~i~~~~ 83 (366)
T TIGR00886 6 SWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVD--KFGPRYTTTLSLLLLAIPCLW 83 (366)
T ss_pred HHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHH--HhCchHHHHHHHHHHHHHHHH
Confidence 444445555555665665553 322333 445566666777888999999999999 999999988777666555555
Q ss_pred HHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 017012 110 FFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVID 189 (379)
Q Consensus 110 fa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~d 189 (379)
+++.-. + .| .+. +.|++ ..+.+. .......+++|
T Consensus 84 ~~~~~~-~-----------------------------------~~-----~~~-~~~~~---~g~~~~-~~~~~~~~~~~ 117 (366)
T TIGR00886 84 AGLAVQ-S-----------------------------------YS-----VLL-LLRLF---IGIAGG-SFASCMPWISF 117 (366)
T ss_pred HHHHhh-h-----------------------------------HH-----HHH-HHHHH---HHHhch-hhHhHHHHHHH
Confidence 443210 0 12 111 11222 222222 22345678999
Q ss_pred hcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 190 VMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 190 i~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.++.+|+.+..++...++++|..+|+.++..+.
T Consensus 118 ~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 150 (366)
T TIGR00886 118 FFPKKIQGTALGLAAGWGNMGGGVAQFVMPPII 150 (366)
T ss_pred hcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 999999999999999888888877777766554
No 39
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.89 E-value=2.9e-08 Score=99.06 Aligned_cols=135 Identities=18% Similarity=0.157 Sum_probs=100.3
Q ss_pred HHHHHHHHHhhhccchhhcccCccchhHH--HHHH--HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 017012 38 FFILSAYFVVLPLRDEGAISLGLSKLPGL--FVGS--LILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLL 113 (379)
Q Consensus 38 F~il~~y~ilrpird~l~vs~Gae~lp~l--~~~~--~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~ 113 (379)
++-.+.|..+|+...+...+-| ..++. ++++ .+++++.+|..|.++| |+|||+++.+....-+++++++++.
T Consensus 43 ~L~~~~~~~V~~F~~a~~~~~~--~~~~yaGflGSsF~ilQ~~sS~~~G~~SD--~yGRkpvll~c~~~va~s~ll~~~S 118 (451)
T KOG2615|consen 43 SLYPFVVFMVRDFNIAIGEPDG--ASVFYAGFLGSSFSILQFISSPLWGCLSD--RYGRKPVLLACLIGVALSYLLWALS 118 (451)
T ss_pred chhHHHHHhhHHHHHhhCCccc--ccchhhhhHhhHHHHHHHHhhhhhhhhhh--hhCchHHHHHHHHHHHHHHHHHHHH
Confidence 3344566666666655544433 24442 6655 5699999999999999 9999999999888877777777763
Q ss_pred HhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 017012 114 WQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDS 193 (379)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~ 193 (379)
-.+. .++ ++|. ..+..-.++++.=+++.|+.+.
T Consensus 119 ~~F~------------------------------------------afv-~aR~----l~Gi~kgnl~v~rAiisdV~se 151 (451)
T KOG2615|consen 119 RNFA------------------------------------------AFV-LARF----LGGIFKGNLSVIRAIISDVVSE 151 (451)
T ss_pred HHHH------------------------------------------HHH-HHHH----hhhhccCchHHHHHHHHhhcCh
Confidence 3110 011 2233 2333344778889999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 017012 194 ESGSRLFGFIGAGATLGQLFGSLFAAGMAF 223 (379)
Q Consensus 194 ~eakR~fgligag~~lG~I~G~~l~~~la~ 223 (379)
|+..+-++.++...++|.|+||+++++++.
T Consensus 152 k~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 152 KYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred hhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 999999999999999999999999999985
No 40
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.88 E-value=2.7e-06 Score=84.67 Aligned_cols=156 Identities=15% Similarity=0.111 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSL 107 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~ 107 (379)
+....+..|+...+....-|.-+.+.-+.| .+...++.........+..|+.|+++| |++||+++......+++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSS--RYSLKHILLFLVALCVIGN 82 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHc--cCccHHHHHHHHHHHHHHH
Confidence 344455567777777777777776655544 345666666778888999999999999 9999999988777766555
Q ss_pred HHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017012 108 LVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARV 187 (379)
Q Consensus 108 llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~ 187 (379)
+++++.- + .| ++++ .|.+ ............-..+
T Consensus 83 ~l~~~~~--~-----------------------------------~~----~l~~--~r~l---~G~~~~~~~~~~~~~~ 116 (382)
T PRK10091 83 AMFTLSS--S-----------------------------------YL----MLAI--GRLV---SGFPHGAFFGVGAIVL 116 (382)
T ss_pred HHHHHhC--c-----------------------------------HH----HHHH--HHHH---HHhhhHHHHHHHHHHH
Confidence 5444311 0 12 1222 1221 1221111222334568
Q ss_pred HhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHH
Q 017012 188 IDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAA 233 (379)
Q Consensus 188 ~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa 233 (379)
.|.++.++..|..++..+|.++|..+|+.+++.+. ..|. +.+.+.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~ 164 (382)
T PRK10091 117 SKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIA 164 (382)
T ss_pred HHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHH
Confidence 89998888888999999999999999999988876 4454 3444433
No 41
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.88 E-value=1.6e-06 Score=88.53 Aligned_cols=116 Identities=8% Similarity=-0.044 Sum_probs=73.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCc
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDP 139 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (379)
.+..-++.....+...+..|+.|+++| |++||+++.+....+++..+++++..... . +
T Consensus 62 ~~~~g~~~~~~~i~~~~~~~~~G~l~D--r~g~k~~l~~~~~~~~i~~~~~~~~~~~~-~------------------~- 119 (452)
T PRK11273 62 RGDLGFALSGISIAYGFSKFIMGSVSD--RSNPRVFLPAGLILAAAVMLFMGFVPWAT-S------------------S- 119 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhh--ccCCchhHHHHHHHHHHHHHHHHhhhccc-c------------------c-
Confidence 444555556667788889999999999 99999988877766665555555431100 0 0
Q ss_pred hhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHH-HHhHHHH
Q 017012 140 KAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQ-LFGSLFA 218 (379)
Q Consensus 140 ~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~-I~G~~l~ 218 (379)
.| ... +......+.........-..+.|.++.+|..+..|+.+.+.++|+ ++|+.++
T Consensus 120 -------------~~-----~~~----~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~ 177 (452)
T PRK11273 120 -------------IA-----VMF----VLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFL 177 (452)
T ss_pred -------------HH-----HHH----HHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 11 111 111112222222222334667889999999999999999999987 4465543
Q ss_pred H
Q 017012 219 A 219 (379)
Q Consensus 219 ~ 219 (379)
.
T Consensus 178 ~ 178 (452)
T PRK11273 178 L 178 (452)
T ss_pred H
Confidence 3
No 42
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.86 E-value=1.5e-06 Score=88.41 Aligned_cols=120 Identities=5% Similarity=-0.076 Sum_probs=75.1
Q ss_pred cCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccC
Q 017012 58 LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKE 137 (379)
Q Consensus 58 ~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (379)
.+.++..++.........+..++.|+++| |++||+++.+....+++..++++......
T Consensus 58 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~d--r~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------- 115 (438)
T TIGR00712 58 FSKGELGFALSAISIAYGFSKFIMGSVSD--RSNPRVFLPAGLILSAAVMLLMGFVPWAT-------------------- 115 (438)
T ss_pred CCHhHhHHHHHHHHHHHHHhhhccchhhh--ccCCceehHHHHHHHHHHHHHHhcccccc--------------------
Confidence 34556667766777788899999999999 99999977665444443333332211000
Q ss_pred CchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHH
Q 017012 138 DPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLF 217 (379)
Q Consensus 138 ~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l 217 (379)
+ . .| ... ++...............-..+.|.++.+|+.+..|+.+.+.++|+.+|+.+
T Consensus 116 ~------~-------~~-----~l~----~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l 173 (438)
T TIGR00712 116 S------S-------IA-----IMF----VLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLL 173 (438)
T ss_pred c------h-------HH-----HHH----HHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHH
Confidence 0 0 11 111 111112222222222334567889999999999999999999999999877
Q ss_pred HHHH
Q 017012 218 AAGM 221 (379)
Q Consensus 218 ~~~l 221 (379)
.+..
T Consensus 174 ~~~~ 177 (438)
T TIGR00712 174 VLLG 177 (438)
T ss_pred HHHH
Confidence 6653
No 43
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.85 E-value=3.4e-06 Score=84.60 Aligned_cols=151 Identities=13% Similarity=0.050 Sum_probs=95.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHH
Q 017012 28 SALLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSV 105 (379)
Q Consensus 28 ~~~l~~~l~~F~il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~ 105 (379)
+.++...+..++....+...-+....+.-+.| .++..++.....+...+..|+.|+++| |++||+++.+.....++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~d--r~g~r~~l~~~~~~~~~ 95 (426)
T PRK12307 18 NALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLAD--KFGRKPLMMWSIVAYSV 95 (426)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCChHHHHHHHHHHHH
Confidence 33444444444444444444444433332333 334455555566778889999999999 99999999887777666
Q ss_pred HHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Q 017012 106 SLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWA 185 (379)
Q Consensus 106 ~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~ 185 (379)
..+++++.- + .|. +++ .|. ...+.........-.
T Consensus 96 ~~~~~~~~~--~-----------------------------------~~~----l~~--~r~---l~G~g~g~~~~~~~~ 129 (426)
T PRK12307 96 GTGLSGLAS--G-----------------------------------VIM----LTL--SRF---IVGMGMAGEYACAST 129 (426)
T ss_pred HHHHHHHHh--H-----------------------------------HHH----HHH--HHH---HHHHHHhhHHHHHHH
Confidence 555544421 0 121 111 122 122222334446677
Q ss_pred HHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH
Q 017012 186 RVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 186 ~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~ 226 (379)
++.|.++.+++.|..++..++.++|.++|+.+...+. ..|.
T Consensus 130 ~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w 171 (426)
T PRK12307 130 YAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW 171 (426)
T ss_pred HHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCH
Confidence 8999999999999999999999999999998877765 3443
No 44
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.84 E-value=6.4e-06 Score=83.40 Aligned_cols=261 Identities=19% Similarity=0.141 Sum_probs=166.8
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHhhhccchhhcccCcc--chhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHH
Q 017012 23 HPHETSALLHSSSCFFFILSAYFVVLPLRDEGAISLGLS--KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIH 100 (379)
Q Consensus 23 ~~~E~~~~l~~~l~~F~il~~y~ilrpird~l~vs~Gae--~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~ 100 (379)
++....+++.+.+..|++...=.+.-++-+.+.-+.|.+ .--++-+.......+.+|+.+.+.+ |++|||++....
T Consensus 8 ~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~--r~~Rr~lLl~~l 85 (394)
T COG2814 8 RKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTG--RLERRRLLLGLL 85 (394)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHc--ccchHHHHHHHH
Confidence 445666888999999999988887777777766664433 2334556667788899999999999 999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHH
Q 017012 101 RFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITI 180 (379)
Q Consensus 101 ~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~ 180 (379)
..|++.-++.++... -| .+. ++|+. .++--....
T Consensus 86 ~lFi~~n~l~alAp~-------------------------------------f~-----~Ll-~aR~~---~g~a~G~f~ 119 (394)
T COG2814 86 ALFIVSNLLSALAPS-------------------------------------FA-----VLL-LARAL---AGLAHGVFW 119 (394)
T ss_pred HHHHHHHHHHHHhcc-------------------------------------HH-----HHH-HHHHH---HHHHHHHHH
Confidence 999988888877421 12 222 44663 233244556
Q ss_pred HHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhHH-HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 017012 181 SSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGPY-LLLFAACLMELAAQSSKGIYKEIPRRPEELP 258 (379)
Q Consensus 181 slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~~-lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~ 258 (379)
++-+..+.|+-++++..|--+++..|-+++.++|.-++++++ .+|-. .+++-+++..+++. .+.+..+..
T Consensus 120 ~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~---~~~~~lP~~----- 191 (394)
T COG2814 120 SIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALL---LLWKLLPPS----- 191 (394)
T ss_pred HHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHH---HHHHhCCCc-----
Confidence 677788999999999999999999999999999999999998 56753 44433333333333 232232200
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 017012 259 PLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTV-IA 337 (379)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~-v~ 337 (379)
+.. + .++ +.....-.++|+|-++...+..++ .+...+.-|.+-+- .+
T Consensus 192 ---------~~~----~---------------~~~---~~~~~~~~~l~~p~v~~~l~~t~l-~~~g~F~~ftYi~P~L~ 239 (394)
T COG2814 192 ---------EIS----G---------------SLP---GPLRTLLRLLRRPGVLLGLLATFL-FMTGHFALYTYIRPFLE 239 (394)
T ss_pred ---------cCC----C---------------CCC---cchhHHHHHhcCchHHHHHHHHHH-HHcchhhhHHhHHHHHH
Confidence 000 0 000 112223345666666554443332 23334444443322 22
Q ss_pred HhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 338 MTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLL 375 (379)
Q Consensus 338 ~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrr 375 (379)
+...-+ .+..+......|+..++-...+ ||+.+|
T Consensus 240 ~v~g~s---~~~vs~~Ll~~Gv~~~~Gn~~g-Grl~dr 273 (394)
T COG2814 240 SVAGFS---VSAVSLVLLAFGIAGFIGNLLG-GRLADR 273 (394)
T ss_pred HccCCC---HhHHHHHHHHHHHHHHHHHHHH-hhhccc
Confidence 222212 3445777888888887777755 788877
No 45
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.83 E-value=4.5e-06 Score=81.60 Aligned_cols=159 Identities=15% Similarity=0.100 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHhhhccchhhcc-cC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHH-HHHHHHHHHHH
Q 017012 35 SCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLI-HRFFSVSLLVF 110 (379)
Q Consensus 35 l~~F~il~~y~ilrpird~l~vs-~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~-~~~f~~~~llf 110 (379)
+..|+...++.+..|.-.....+ .| .+.+.++.........+..|+.|+++| |++|||.+.+. ....++..+++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~D--r~g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSD--YQGDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCchHHHHHHHHHHHHHHHHH
Confidence 34566777777777755443332 33 445566666666778889999999999 99998875443 22222222222
Q ss_pred HHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017012 111 FLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDV 190 (379)
Q Consensus 111 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di 190 (379)
++ . + + .|. +++ .+.+ .............+++.|.
T Consensus 82 ~~----~-~------------------~--------------~~~----l~~--~~~~---~g~~~~~~~p~~~~~~~~~ 115 (375)
T TIGR00899 82 AW----N-R------------------N--------------YFL----LLV--LGVL---LSSFASTANPQLFALAREH 115 (375)
T ss_pred Hh----c-c------------------h--------------HHH----HHH--HHHH---HHhhhhhhHHHHHHHHHHH
Confidence 22 1 1 0 121 111 1111 1222222334556677787
Q ss_pred cCccchhH--HHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHH
Q 017012 191 MDSESGSR--LFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQ 241 (379)
Q Consensus 191 ~~~~eakR--~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa~ll~l~~~ 241 (379)
.+.++..+ .++....+.++|.++|+.+++.+. ..|. ..+++.+++..++..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~ 170 (375)
T TIGR00899 116 ADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGV 170 (375)
T ss_pred hhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 76554443 379999999999999999998886 4564 344444443333333
No 46
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.82 E-value=3.3e-06 Score=86.03 Aligned_cols=275 Identities=16% Similarity=0.166 Sum_probs=163.0
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHhhhcc-----chhhcccCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHH
Q 017012 23 HPHETSALLHSSSCFFFILSAYFVVLPLR-----DEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALV 97 (379)
Q Consensus 23 ~~~E~~~~l~~~l~~F~il~~y~ilrpir-----d~l~vs~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~ 97 (379)
.+++.+..+...+.+|+-.+.+.+.-|.= |...+ ..+++-.++-.....++++.|+||.++| |++.||-+.
T Consensus 2 ~~~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GL--s~~~iG~i~s~~~~~~l~~qp~~G~i~D--klg~kK~Ll 77 (412)
T PF01306_consen 2 YYFKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGL--SGTEIGIIFSAGSLFALLAQPVYGFISD--KLGLKKHLL 77 (412)
T ss_dssp CCCHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHTHHHHHHHHH--HCTTCSHHH
T ss_pred CCccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCC--CHHHHHHHHHHHHHHHHHHHHhHHHhcc--hhhhhHHHH
Confidence 35667778888888888888888877753 33333 3666777777778899999999999999 999777555
Q ss_pred HHHHHHHHHHHHHHH-HHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHH-H
Q 017012 98 LIHRFFSVSLLVFFL-LWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVAL-L 175 (379)
Q Consensus 98 ~~~~~f~~~~llfa~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v-~ 175 (379)
+.++..++....|.. +..|. + |. + .|.+ ..++ .++ .+. +
T Consensus 78 ~~i~~l~~l~~pff~~v~~pl-------l------~~-----------n-------~~lg---~iig--~i~---l~~~f 118 (412)
T PF01306_consen 78 WFIAILLLLFGPFFIYVFGPL-------L------QS-----------N-------FWLG---AIIG--GIY---LGLVF 118 (412)
T ss_dssp HHHHHHHHTCHHHHHHTHHHH-------H------HT-----------T--------HHH---HHHT--TTT---TTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHH-------H------HH-----------H-------HHHH---HHHH--HHH---HHHHH
Confidence 444433222222221 11111 1 00 0 1210 0000 000 000 1
Q ss_pred HHHHHHHHHHHHHhhcCccchhHH---HHHHHHHHHHHHHHhHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHhhhcC
Q 017012 176 NLITISSTWARVIDVMDSESGSRL---FGFIGAGATLGQLFGSLFAAGMAFLGPY-LLLFAACLMELAAQSSKGIYKEIP 251 (379)
Q Consensus 176 ~~~~~slfW~~~~di~~~~eakR~---fgligag~~lG~I~G~~l~~~la~~g~~-lll~aa~ll~l~~~~~~~l~~~~~ 251 (379)
+. .+. +.|....+-++|. ||-.=+.|++|..+++.++|.+-.++|. .+.++.++..+..++ ..+.|...
T Consensus 119 ~~-~~~-----~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~ll-l~~~~~~~ 191 (412)
T PF01306_consen 119 NA-GVP-----LSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILLLL-LLLLKPDV 191 (412)
T ss_dssp TT-HHH-----HHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHSS---S
T ss_pred cc-cch-----HHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHHHH-HHHcCCcC
Confidence 11 111 2255544445554 9999999999999999999998877764 333322222111111 11111111
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHH
Q 017012 252 RRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQ 331 (379)
Q Consensus 252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~ 331 (379)
.. + .+.. |+. + .++.+.+..+ +..+++.|-.+.+.++++......+..|.|
T Consensus 192 ~~---------~---~~~~-~~~--------------~-~~~~~~~~~~-~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqq 242 (412)
T PF01306_consen 192 PP---------Q---AEVA-DAL--------------G-AKKDKVSLKD-VLSLFKMRNFWFFVLFVIGVAAIYDVFDQQ 242 (412)
T ss_dssp SS---------S---S-SS-TTS--------------S-S------HHH-HHHHTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ch---------h---hhhh-ccc--------------c-cCCCCCcHHH-HHHHhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 0000 000 0 0111123333 667889999999999998888899999999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 332 KVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 332 ~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
+..+-+..++++++=++.+|...+..-++-+++.. .++++++|.|
T Consensus 243 f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~-~~p~li~rig 287 (412)
T PF01306_consen 243 FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMF-FSPWLINRIG 287 (412)
T ss_dssp HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-
T ss_pred HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHH-HHHHHHHhcC
Confidence 99999999999999999999998888777777755 5689999998
No 47
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.81 E-value=4.7e-06 Score=83.03 Aligned_cols=116 Identities=11% Similarity=0.066 Sum_probs=80.4
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCC
Q 017012 59 GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKED 138 (379)
Q Consensus 59 Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (379)
+.+...++.........+..++.|+++| |++||+++......+.+..++.++. . +
T Consensus 48 s~~~~g~~~~~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~~~~~~~~~~~~-----~------------------~ 102 (406)
T PRK11551 48 DVAQMGWAFSAGILGLLPGALLGGRLAD--RIGRKRILIVSVALFGLFSLATAQA-----W------------------D 102 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCCchhHHHHHHHHHHHHHHHHHh-----c------------------c
Confidence 3555666666667788889999999999 9999999877655444333332221 0 0
Q ss_pred chhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHH
Q 017012 139 PKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFA 218 (379)
Q Consensus 139 ~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~ 218 (379)
.|. .. +.......-.........+++.|.++.+++.+.+++...+.++|.++|+.++
T Consensus 103 --------------~~~----~~-----~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 159 (406)
T PRK11551 103 --------------FPS----LL-----VARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIG 159 (406)
T ss_pred --------------HHH----HH-----HHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 121 11 1112223323344557788999999999999999999999999999999887
Q ss_pred HHHH
Q 017012 219 AGMA 222 (379)
Q Consensus 219 ~~la 222 (379)
..+.
T Consensus 160 ~~~~ 163 (406)
T PRK11551 160 VLAA 163 (406)
T ss_pred HHHc
Confidence 6665
No 48
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.81 E-value=4.3e-06 Score=80.91 Aligned_cols=139 Identities=15% Similarity=0.183 Sum_probs=81.2
Q ss_pred HhhhccchhhcccCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhh
Q 017012 46 VVLPLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKL 125 (379)
Q Consensus 46 ilrpird~l~vs~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~ 125 (379)
++-+++|.+.+ ..++..++.........+..|+.|+++| |+|||+++......+.+..+++++.- +
T Consensus 25 ~~~~~~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~G~l~d--~~G~r~~~~~~~~~~~~~~~~~~~~~--~-------- 90 (377)
T TIGR00890 25 LAPPLGRYFGV--GVTAVAIWFTLLLIGLAMSMPVGGLLAD--KFGPRAVAMLGGILYGLGFTFYAIAD--S-------- 90 (377)
T ss_pred HHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHhhhhHHHHH--HcCccchhHHhHHHHHHHHHHHHHHH--H--------
Confidence 34444454443 3556677777778888999999999999 99999998776655554444443321 1
Q ss_pred chhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHH
Q 017012 126 ESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGA 205 (379)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgliga 205 (379)
.|. +++ .|. ....-........-..+.+.++ ||+.+..++...
T Consensus 91 ---------------------------~~~----~~~--~~~---~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 133 (377)
T TIGR00890 91 ---------------------------LAA----LYL--TYG---LASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIG 133 (377)
T ss_pred ---------------------------HHH----HHH--HHH---HHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHH
Confidence 121 111 122 1111111122233344566665 677889999999
Q ss_pred HHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHH
Q 017012 206 GATLGQLFGSLFAAGMA-FLGP-YLLLFAACL 235 (379)
Q Consensus 206 g~~lG~I~G~~l~~~la-~~g~-~lll~aa~l 235 (379)
+.++|.++++.+.+.+. ..|. +.+++.+++
T Consensus 134 ~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~ 165 (377)
T TIGR00890 134 GYGLGSFILSPLITSVINLEGVPAAFIYMGII 165 (377)
T ss_pred hcchhHhHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 99999887655544443 3443 344443433
No 49
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.80 E-value=3.3e-06 Score=80.56 Aligned_cols=143 Identities=17% Similarity=0.153 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHhhhccchhhccc--CccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHH
Q 017012 33 SSSCFFFILSAYFVVLPLRDEGAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVF 110 (379)
Q Consensus 33 ~~l~~F~il~~y~ilrpird~l~vs~--Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llf 110 (379)
.....++...+++...+.-+...-+. +.++..++.........+..|+.|+++| |++||+.+.+......+..+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d--~~g~r~~~~~~~~~~~~~~~~~ 81 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSD--RFGRRRVLLLGLLLFALGSLLL 81 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHH--HhCCchhhHHHHHHHHHHHHHH
Confidence 34455667777777777777666553 4455666666777888999999999999 9999997766555554444443
Q ss_pred HHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017012 111 FLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDV 190 (379)
Q Consensus 111 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di 190 (379)
.+. . + .| .+. +..+..+..........-+++.|.
T Consensus 82 ~~~---~--------------------~--------------~~-----~~~----~~~~l~g~~~~~~~~~~~~~~~~~ 115 (352)
T cd06174 82 AFA---S--------------------S--------------LW-----LLL----VGRFLLGLGGGALYPAAAALIAEW 115 (352)
T ss_pred HHh---c--------------------c--------------HH-----HHH----HHHHHHHcccccccHhHHHHHHHh
Confidence 331 1 0 12 111 111112222233445667889999
Q ss_pred cCccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 017012 191 MDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF 223 (379)
Q Consensus 191 ~~~~eakR~fgligag~~lG~I~G~~l~~~la~ 223 (379)
++.||+.+.+++...+.++|.++|+.+++.+.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 148 (352)
T cd06174 116 FPPKERGRALGLFSAGFGLGALLGPLLGGLLAE 148 (352)
T ss_pred CCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988764
No 50
>PRK11043 putative transporter; Provisional
Probab=98.80 E-value=1.2e-05 Score=80.13 Aligned_cols=143 Identities=15% Similarity=0.013 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHhhhccchhhcc--cCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 017012 36 CFFFILSAYFVVLPLRDEGAIS--LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLL 113 (379)
Q Consensus 36 ~~F~il~~y~ilrpird~l~vs--~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~ 113 (379)
+.++-.++..+.-|.-+.+--+ .+.+.+.++.........+..++.|+++| |++||+++.......++..+++++
T Consensus 14 ~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~~~~~~~~~~~- 90 (401)
T PRK11043 14 LSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSD--RYGRKPVLLAGLSLFALGSLGMLW- 90 (401)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHh--hcCCcHHHHHHHHHHHHHHHHHHH-
Confidence 3445555566666655444333 23455666666666778889999999999 999999887655444433333322
Q ss_pred HhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 017012 114 WQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDS 193 (379)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~ 193 (379)
. + + .|. +++ .|.+ ..+..........+.+.|.++.
T Consensus 91 ---~-~------------------~--------------~~~----l~~--~~~l---~G~~~~~~~~~~~~~~~~~~~~ 125 (401)
T PRK11043 91 ---V-E------------------S--------------AAQ----LLV--LRFV---QAVGVCSAAVIWQALVIDRYPA 125 (401)
T ss_pred ---h-c------------------C--------------HHH----HHH--HHHH---HHhhhHHHHHHHHHHHHHhcCc
Confidence 1 0 0 121 111 1221 1221222334567889999999
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH
Q 017012 194 ESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 194 ~eakR~fgligag~~lG~I~G~~l~~~la-~~g~ 226 (379)
+++.|.++.+..+.++|..+||.+++.+. ..|.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~ 159 (401)
T PRK11043 126 QKANRVFATIMPLVALSPALAPLLGAWLLNHFGW 159 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Confidence 99999999999999999999999998876 4454
No 51
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.77 E-value=3.9e-06 Score=86.10 Aligned_cols=120 Identities=13% Similarity=0.083 Sum_probs=78.3
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCc
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDP 139 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (379)
..++-++..+......+..|+.|+++| |++||+++........+..++++.+......
T Consensus 63 ~~~~g~~~s~~~~~~~~~~~~~G~l~D--r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~-------------------- 120 (467)
T PRK09556 63 TTELGMIGLGFSITYGVGKTLVGYYAD--GKNTKQFLPFLLILSAICMLGFGASLGSGSV-------------------- 120 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHhh--ccCccchHHHHHHHHHHHHHHHHHHHhcccc--------------------
Confidence 344555555556677788999999999 9999999877665555444555543211100
Q ss_pred hhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHH
Q 017012 140 KAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAA 219 (379)
Q Consensus 140 ~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~ 219 (379)
+ .| .+. ++.....+.........=.+++|.++.+|+.+..|+.++++++|.++|+.+..
T Consensus 121 -----~-------~~-----~l~----~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~ 179 (467)
T PRK09556 121 -----S-------LG-----LMI----ALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVAL 179 (467)
T ss_pred -----h-------HH-----HHH----HHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHH
Confidence 0 12 111 12222232222222334468999999999999999999999999999988876
Q ss_pred HHH
Q 017012 220 GMA 222 (379)
Q Consensus 220 ~la 222 (379)
.+.
T Consensus 180 ~~~ 182 (467)
T PRK09556 180 WGA 182 (467)
T ss_pred HHH
Confidence 654
No 52
>PRK12382 putative transporter; Provisional
Probab=98.75 E-value=1.1e-05 Score=80.24 Aligned_cols=157 Identities=8% Similarity=0.012 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhcc-cC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs-~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~ 106 (379)
++.+.+..|+...+.++..|+-.....+ .| .+.+-++..+......+..|+.|+++| |++|||++......+++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~D--r~g~r~~l~~~~~~~~~~ 94 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLAD--QYGAKRSALQGMLACGLA 94 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHH--hhcchHHHHHHHHHHHHH
Confidence 5555556667777777777754332222 33 445556666777888899999999999 999999887765554443
Q ss_pred HHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 017012 107 LLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWAR 186 (379)
Q Consensus 107 ~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~ 186 (379)
.+.+......... + . ++ .| ++++ .|.+ ..+-.......-.+.
T Consensus 95 ~~~~~~~~~~~~~------------------~------~---~~--~~----~l~~--~r~l---~G~~~~~~~~~~~~~ 136 (392)
T PRK12382 95 GLAYLLAAILPVS------------------A------P---FK--FA----LLVV--GRLI---LGFGESQLLTGALTW 136 (392)
T ss_pred HHHHHhhhccccc------------------h------h---HH--HH----HHHH--HHHH---HHHHHHHHHHHHHHH
Confidence 3333222110000 0 0 00 11 0111 1221 222222223334567
Q ss_pred HHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH
Q 017012 187 VIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 187 ~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~ 226 (379)
+.|.++.||+.|..++.+.+.+.|.++||.+++.+. ..|.
T Consensus 137 ~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 177 (392)
T PRK12382 137 GLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGF 177 (392)
T ss_pred HHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 789999999999999999999999999999988876 4453
No 53
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.74 E-value=6.1e-06 Score=82.01 Aligned_cols=146 Identities=11% Similarity=0.046 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSL 107 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~ 107 (379)
+...++..|+...+..++-|.-+.+.-+.| .++.-++..+......+..|+.|+++| |++|||++......+++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~d--r~g~k~~~~~~~~~~~~~~ 85 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIK--RIGFNRSYYLASLIFAAGC 85 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHHH
Confidence 444555567777777777777766665543 345666666777788999999999999 9999999888766665554
Q ss_pred HHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017012 108 LVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARV 187 (379)
Q Consensus 108 llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~ 187 (379)
+.+++. .+ .| .+. +.|+ ...+.........=+.+
T Consensus 86 ~~~~~~--~~-----------------------------------~~-----~l~-~~~~---l~G~~~~~~~~~~~~~~ 119 (381)
T PRK03633 86 AGLGLM--VG-----------------------------------FW-----SWL-AWRF---VAGIGCAMIWVVVESAL 119 (381)
T ss_pred HHHHHh--cc-----------------------------------HH-----HHH-HHHH---HHHHHHHHHHHHHHHHH
Confidence 444331 00 12 111 1122 12221222222223445
Q ss_pred HhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 017012 188 IDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF 223 (379)
Q Consensus 188 ~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~ 223 (379)
+|..+.+|..|.++....+.++|..+|+.+++.+..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 155 (381)
T PRK03633 120 MCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVST 155 (381)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 688888899999999999999999999999888763
No 54
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.74 E-value=2.1e-05 Score=81.29 Aligned_cols=154 Identities=12% Similarity=0.068 Sum_probs=93.1
Q ss_pred hhcccCcCchhHHHHHHHHHHHHHHHHHHhhhccchhhcccCc--cchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhH
Q 017012 18 VFVTLHPHETSALLHSSSCFFFILSAYFVVLPLRDEGAISLGL--SKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKA 95 (379)
Q Consensus 18 ~~~~i~~~E~~~~l~~~l~~F~il~~y~ilrpird~l~vs~Ga--e~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv 95 (379)
..++.+++..+.+......+++.....+..-|..+.+.-+.|. ++.-++....+....+..++.|+++| |++||++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~d--r~G~r~~ 103 (476)
T PLN00028 26 RLFSFARPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCD--LYGPRYG 103 (476)
T ss_pred cccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCChHH
Confidence 3455555556666666666777776666666665555444443 33444444556677778899999999 9999998
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHH
Q 017012 96 LVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALL 175 (379)
Q Consensus 96 ~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~ 175 (379)
+.......++..+++++.- + .|. +++ .|. + ....
T Consensus 104 ~~~~~~~~~~~~~~~~~~~--s-----------------------------------~~~----l~~--~r~--l-~G~~ 137 (476)
T PLN00028 104 SAFLLMLTAPAVFCMSLVS--S-----------------------------------ATG----FIA--VRF--F-IGFS 137 (476)
T ss_pred HHHHHHHHHHHHHHHHHhc--C-----------------------------------HHH----HHH--HHH--H-HHHH
Confidence 7665544443333333210 0 121 111 121 1 1211
Q ss_pred -HHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 176 -NLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 176 -~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~l 221 (379)
+..... -..++|.++.+++.+..|+...++++|..+|+.+...+
T Consensus 138 ~~~~~~~--~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i 182 (476)
T PLN00028 138 LATFVSC--QYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLV 182 (476)
T ss_pred HHhhHHH--HHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222 23578999999999999999988888888876665443
No 55
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.71 E-value=8.4e-06 Score=81.11 Aligned_cols=159 Identities=13% Similarity=0.060 Sum_probs=104.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhccchhhcc-cC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHH
Q 017012 27 TSALLHSSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFF 103 (379)
Q Consensus 27 ~~~~l~~~l~~F~il~~y~ilrpird~l~vs-~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f 103 (379)
.+++..+.+..|....+..+..|+-.....+ .| .+.+.++.........+..|+.|+++| |++|||++......+
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~D--r~g~r~~l~~~~~~~ 91 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYAD--TLGPKKAVVFGLCGC 91 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHh--ccCCcchHHHHHHHH
Confidence 3467777788888888888888876654433 34 445566666667788899999999999 999999998876665
Q ss_pred HHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCcccccc-chhhhhhHHHHHHHHHHHHHHHHH
Q 017012 104 SVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHG-WFYVSVRMGFFLWVALLNLITISS 182 (379)
Q Consensus 104 ~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~-w~~~~~~~~Fyvw~~v~~~~~~sl 182 (379)
++..++.++..... .|...+ |.+. +.|. ...+........
T Consensus 92 ~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~l~-~~r~---l~G~~~~~~~~~ 132 (399)
T PRK05122 92 ALSGLLYLLAGLLA-----------------------------------AWPVLSLLLLL-LGRL---LLGIGESLAGTG 132 (399)
T ss_pred HHHHHHHHHhhhhh-----------------------------------ccchhHHHHHH-HHHH---HHHhhHHhhcch
Confidence 54444433322111 110000 0111 1112 122222222333
Q ss_pred HHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH
Q 017012 183 TWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 183 fW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~ 226 (379)
.-..++|.++.||+.|..++.+.+.++|.++|+.+++.+. ..|.
T Consensus 133 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~ 177 (399)
T PRK05122 133 SILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGL 177 (399)
T ss_pred HHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccH
Confidence 4456789999999999999999999999999999988876 4554
No 56
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.68 E-value=2.4e-06 Score=85.80 Aligned_cols=250 Identities=18% Similarity=0.187 Sum_probs=124.4
Q ss_pred hhhccchhhcccCccchhHHHHHHHHHHHHHHHHHHHhhc--CCCCCchhH-HHHHHHHHHHHHHHHHHHHhhhcccchh
Q 017012 47 VLPLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFS--LPNLSKAKA-LVLIHRFFSVSLLVFFLLWQSSSIGYLS 123 (379)
Q Consensus 47 lrpird~l~vs~Gae~lp~l~~~~~~~~ll~~~iy~~L~~--~~r~~r~rv-~~~~~~~f~~~~llfa~~~~~~~~~~~~ 123 (379)
..-..|.+.++ ......+.....+...+..|+.|+++| .+|+||||- +.+....+++..++++. . ++
T Consensus 23 ~~~~~~~~g~s--~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~----~-~~--- 92 (437)
T TIGR00792 23 LFFYTDVLGLS--AAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFT----T-PD--- 92 (437)
T ss_pred HHHHHHccCCC--HHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHh----C-CC---
Confidence 33344555554 333455566667788999999999999 113677553 43333333322222211 1 10
Q ss_pred hhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc-CccchhHHHHH
Q 017012 124 KLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVM-DSESGSRLFGF 202 (379)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~-~~~eakR~fgl 202 (379)
. . . ..+ .+ |.+ +.|+...+.......-+++...|++ +.+|+.|..++
T Consensus 93 -~------------~------~--~~~--~~----~~~-----~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~ 140 (437)
T TIGR00792 93 -F------------S------A--TGK--LV----YAY-----ITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTF 140 (437)
T ss_pred -C------------C------c--chH--HH----HHH-----HHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHH
Confidence 0 0 0 000 01 111 2232223322223335678889988 57899999999
Q ss_pred HHHHHHHHHHHhHHHHHHHH-HHh----H--H--HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCC
Q 017012 203 IGAGATLGQLFGSLFAAGMA-FLG----P--Y--LLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADG 273 (379)
Q Consensus 203 igag~~lG~I~G~~l~~~la-~~g----~--~--lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~ 273 (379)
-..++++|.++++.+++.+. .++ . + ...+.+++..+...... ....++ +++. +
T Consensus 141 ~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~---~~~~e~-------------~~~~--~ 202 (437)
T TIGR00792 141 RRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICF---FGTKER-------------YSEI--P 202 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHH---cCCEec-------------CCCC--C
Confidence 99999999888877766654 222 1 2 22222222222222111 111100 0000 0
Q ss_pred CCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 017012 274 QTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEI 353 (379)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~ 353 (379)
. +++.+.+..+.+|.++++|.+..+++..++.............-+.+....++++ .+.+
T Consensus 203 ~----------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 262 (437)
T TIGR00792 203 K----------------NIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPEL----FSYM 262 (437)
T ss_pred c----------------ccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHH----HHHH
Confidence 0 0011125788899999999988776666665554433222111111222222222 2334
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 354 NSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 354 ~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
....++..++... +.+++.+|+|
T Consensus 263 ~~~~~i~~ii~~~-~~~~l~~r~g 285 (437)
T TIGR00792 263 GSIAIVAGLIGVL-LFPRLVKKFG 285 (437)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHhC
Confidence 4444555555544 4579999887
No 57
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.68 E-value=1e-05 Score=81.90 Aligned_cols=115 Identities=6% Similarity=-0.037 Sum_probs=80.8
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCc
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDP 139 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (379)
.+.+-++....+....+..++.|+++| |++||+++......+.+..+++++.- +
T Consensus 42 ~~~~g~~~s~~~~~~~~~~~~~g~l~d--r~G~r~~~~~~~~~~~~~~~~~~~~~--~---------------------- 95 (412)
T TIGR02332 42 ATMFGLAATLFYAAYVICGIPSNIMLA--IIGARRWIAGIMVLWGIASTATMFAT--G---------------------- 95 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHH--HhChHHHHHHHHHHHHHHHHHHHHhc--C----------------------
Confidence 334444555556677888899999999 99999998777666655555544310 0
Q ss_pred hhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHH
Q 017012 140 KAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAA 219 (379)
Q Consensus 140 ~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~ 219 (379)
.| +++. .|. ...+...........+++|.++.+|+.+..|+...+.++|.++|+.+++
T Consensus 96 -------------~~----~l~~--~r~---l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~ 153 (412)
T TIGR02332 96 -------------PE----SLYL--LRI---LVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSG 153 (412)
T ss_pred -------------HH----HHHH--HHH---HHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12 1222 122 2344334444566688999999999999999999999999999999988
Q ss_pred HHH
Q 017012 220 GMA 222 (379)
Q Consensus 220 ~la 222 (379)
.+.
T Consensus 154 ~l~ 156 (412)
T TIGR02332 154 YIL 156 (412)
T ss_pred HHH
Confidence 875
No 58
>PRK03699 putative transporter; Provisional
Probab=98.67 E-value=2.9e-05 Score=77.61 Aligned_cols=147 Identities=12% Similarity=0.053 Sum_probs=90.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHH
Q 017012 28 SALLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSV 105 (379)
Q Consensus 28 ~~~l~~~l~~F~il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~ 105 (379)
+.++..++.+|+........-++-+.+.-+.| .+...++.........+..++.|+++| |++|||++......+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d--r~g~r~~~~~~~~~~~i 84 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLME--IIPLKRQLIFGFALMIL 84 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHH
Confidence 33444444455554444555555444443433 445556655666778888999999999 99999987765554443
Q ss_pred HHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Q 017012 106 SLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWA 185 (379)
Q Consensus 106 ~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~ 185 (379)
..++.++ . + + .| .+. +.|.+ ..+.........++
T Consensus 85 ~~~l~~~----~-~------------------~--------------~~-----~~~-~~~~l---~G~~~g~~~~~~~~ 118 (394)
T PRK03699 85 AVAGLMF----S-H------------------S--------------LA-----LFS-IAMFV---LGVVSGITMSIGTF 118 (394)
T ss_pred HHHHHHH----c-c------------------h--------------HH-----HHH-HHHHH---HHHhhHhhccchhH
Confidence 3333322 1 0 0 12 111 11221 22223334446778
Q ss_pred HHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 186 RVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 186 ~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.+.|.++.+++.+..++.+.+.++|++++|.+.+.+.
T Consensus 119 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (394)
T PRK03699 119 LITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLL 155 (394)
T ss_pred HhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999998888888889988899999999998877764
No 59
>PRK10133 L-fucose transporter; Provisional
Probab=98.66 E-value=7.8e-05 Score=76.32 Aligned_cols=147 Identities=11% Similarity=0.023 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q 017012 29 ALLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (379)
Q Consensus 29 ~~l~~~l~~F~il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~ 106 (379)
.+..+++++|...+...+.-++-+.+--+.| .++..++.........+..++.|+++| |++|||++......+++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~d--r~G~r~~l~~g~~~~~~~ 104 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMK--KLSYKAGIITGLFLYALG 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCcHHHHHHHHHHHHHH
Confidence 4455666667767766666655555432333 444555555667788899999999999 999999999988887776
Q ss_pred HHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHH-HHHHHHHHHH
Q 017012 107 LLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALL-NLITISSTWA 185 (379)
Q Consensus 107 ~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~-~~~~~slfW~ 185 (379)
.+++..... . + + .|. +++ .|. +... ........-.
T Consensus 105 ~~l~~~~~~-a-~------------------~--------------~~~----ll~--~r~----l~G~g~g~~~~~~~~ 140 (438)
T PRK10133 105 AALFWPAAE-I-M------------------N--------------YTL----FLV--GLF----IIAAGLGCLETAANP 140 (438)
T ss_pred HHHHHHHHh-c-C------------------C--------------HHH----HHH--HHH----HHHHHHHHHHhhHHH
Confidence 665532111 1 0 0 110 111 122 1111 1222223344
Q ss_pred HHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 186 RVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 186 ~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~l 221 (379)
+++|..+.+|+++..++..++..+|.++|+.+++.+
T Consensus 141 ~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 141 FVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777777777778888998889999988887654
No 60
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.65 E-value=2.9e-05 Score=80.86 Aligned_cols=165 Identities=12% Similarity=0.107 Sum_probs=96.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccchhhcccCcc--chhHHHHHHHHHHHHHHHHHHHhhc--CCCCCchhHHHHHHHHH
Q 017012 28 SALLHSSSCFFFILSAYFVVLPLRDEGAISLGLS--KLPGLFVGSLILTLIAAPVSTLIFS--LPNLSKAKALVLIHRFF 103 (379)
Q Consensus 28 ~~~l~~~l~~F~il~~y~ilrpird~l~vs~Gae--~lp~l~~~~~~~~ll~~~iy~~L~~--~~r~~r~rv~~~~~~~f 103 (379)
.+++......+-+-++|.+..+.-.-.....|.+ ....++.+..++.++..|+.|+++| ..|+||||.+.+.....
T Consensus 4 ~~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 4 RKLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 3555666666777777776666655544444444 3455566778899999999999999 12399999987653332
Q ss_pred -HHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHH
Q 017012 104 -SVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISS 182 (379)
Q Consensus 104 -~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~sl 182 (379)
++.++++++.- . . ...+..+.... + ..|. -|.++ +.+...+..+.....-
T Consensus 84 ~~~~l~ll~~~~--~-~--------~~~~~~~~~~~-----------~-~~~~--i~~~~----i~~~lld~~~n~~~~p 134 (477)
T TIGR01301 84 VAFAVILIGFAA--D-I--------GHLFGDNLDKK-----------T-KPRA--IIVFV----VGFWILDVANNMLQGP 134 (477)
T ss_pred HHHHHHHHHhCc--h-h--------hhhcccccccc-----------c-hhHH--HHHHH----HHHHHHHHHHHHHHHH
Confidence 22222222210 0 0 00000000000 0 0110 01222 1121223334445556
Q ss_pred HHHHHHhhcCccchh--HHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 183 TWARVIDVMDSESGS--RLFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 183 fW~~~~di~~~~eak--R~fgligag~~lG~I~G~~l~~~l 221 (379)
+-++++|.++.+|.+ +.+++.+...++|.++|+.+++..
T Consensus 135 ~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~ 175 (477)
T TIGR01301 135 CRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYS 175 (477)
T ss_pred HHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999998764 689999999999999999998875
No 61
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.64 E-value=1.1e-05 Score=82.25 Aligned_cols=113 Identities=12% Similarity=-0.024 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhc
Q 017012 65 GLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVD 144 (379)
Q Consensus 65 ~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (379)
.+..+......+..++.|+++| |++||+++.+......+..+++.+.....
T Consensus 80 ~~~s~~~~~~~~~~~~~g~l~d--r~g~r~~l~~~~~~~~~~~~~~~~~~~~~--------------------------- 130 (465)
T TIGR00894 80 LILSSHFYGQIIIQIPVGYLAG--KYVFKWSIGIGMFLSSVISIVIPWAAGGG--------------------------- 130 (465)
T ss_pred HHHHHHHHHHHHHHcchHHHHH--HhCcchhhHHHHHHHHHHHHHHHHHHHcC---------------------------
Confidence 3455556778889999999999 99999988776655443333332211000
Q ss_pred cCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 017012 145 QGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF 223 (379)
Q Consensus 145 ~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~ 223 (379)
.| ++++ .|++ ..+...........+++|.++.+|+.+..|+..+|.++|.++|+.+++.+..
T Consensus 131 --------~~----~l~~--~r~~---~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~ 192 (465)
T TIGR00894 131 --------IA----LVVF--CRVI---QGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCE 192 (465)
T ss_pred --------ch----HHHH--HHHH---HHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 1111 1221 2222333444667789999999999999999999999999999999988873
No 62
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.64 E-value=2.8e-05 Score=79.80 Aligned_cols=133 Identities=10% Similarity=0.001 Sum_probs=79.3
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCc
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDP 139 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (379)
.+...++.........+..|+.|+++| |++||+++......+.+..+++++.- +
T Consensus 53 ~~~~~~~~s~~~~~~~~~~~~~G~l~d--r~g~r~~l~~~~~~~~~~~~~~~~~~--~---------------------- 106 (455)
T TIGR00892 53 YSETAWISSIMLAVLYAGGPISSILVN--RFGCRPVVIAGGLLASLGMILASFSS--N---------------------- 106 (455)
T ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHH--HcCchHHHHhhHHHHHHHHHHHHHhh--h----------------------
Confidence 344555555555667788899999999 99999988766555544444333311 1
Q ss_pred hhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHH
Q 017012 140 KAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAA 219 (379)
Q Consensus 140 ~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~ 219 (379)
.|. ++. ..|++ ..+-........-+.+.|.++ +++.+..|+..++..+|..+||.+++
T Consensus 107 -------------~~~----l~~-~~~~l---~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~ 164 (455)
T TIGR00892 107 -------------VIE----LYL-TAGFI---TGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQ 164 (455)
T ss_pred -------------HHH----HHH-HHHHH---HHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHH
Confidence 121 111 01121 111111111223367788885 77888999999999999999999888
Q ss_pred HHH-HHhH-HHHHHHHHHHHHHH
Q 017012 220 GMA-FLGP-YLLLFAACLMELAA 240 (379)
Q Consensus 220 ~la-~~g~-~lll~aa~ll~l~~ 240 (379)
.+. ..|. +.+++.+++..++.
T Consensus 165 ~l~~~~gwr~~f~~~~~~~~~~~ 187 (455)
T TIGR00892 165 YLFESFGWRGSFLILGGLLLHCC 187 (455)
T ss_pred HHHHHhChHHHHHHHHHHHHHHH
Confidence 776 4564 34443333333333
No 63
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.58 E-value=0.00016 Score=73.40 Aligned_cols=149 Identities=12% Similarity=0.106 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhcccCc--cchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q 017012 29 ALLHSSSCFFFILSAYFVVLPLRDEGAISLGL--SKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (379)
Q Consensus 29 ~~l~~~l~~F~il~~y~ilrpird~l~vs~Ga--e~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~ 106 (379)
.+..+...+|+..+.+.+.-|+-+.+--..|. .+.-++....+...++.+++.+++.| |++||+.+.+....+++.
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~--r~G~r~~~~~g~~l~~~g 81 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMK--KLSYKAGILLGLFLYALG 81 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCchHHHHHHHHHHHHH
Confidence 35566777888888888877777666444443 34445555667788899999999999 999999988877766665
Q ss_pred HHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 017012 107 LLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWAR 186 (379)
Q Consensus 107 ~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~ 186 (379)
.+++..... . . + .| .+. + ..+ ....-........=.+
T Consensus 82 ~~l~~~~~~-~-~-------------------------~-------~~-----~~l-~--~~~-l~G~g~g~~~~~~~~~ 118 (410)
T TIGR00885 82 AFLFWPAAE-I-M-------------------------N-------YT-----LFL-V--GLF-ILTAGLGFLETAANPY 118 (410)
T ss_pred HHHHHHHHh-h-c-------------------------c-------HH-----HHH-H--HHH-HHHhhHHHHHhhhhHH
Confidence 555433210 0 0 0 12 121 0 111 1111111111122246
Q ss_pred HHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 187 VIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 187 ~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
+++..+.+++.|..++...+.++|..+|+.+.+.+.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 119 ILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888899999999999999999999998887763
No 64
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.58 E-value=2.8e-05 Score=78.03 Aligned_cols=114 Identities=11% Similarity=-0.011 Sum_probs=78.6
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCc
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDP 139 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (379)
.++.-++.........+..|+.|+++| |++|||++......+++..++.++.- +
T Consensus 43 ~~~~g~~~s~~~~~~~l~~~~~g~l~d--r~G~r~~l~~~~~l~~~~~~~~~~a~--~---------------------- 96 (393)
T PRK09705 43 FSVAALLTALPVVTMGGLALAGSWLHQ--HVSERRSVAISLLLIAVGALMRELYP--Q---------------------- 96 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHH--HhCchHHHHHHHHHHHHHHHHHHHCc--c----------------------
Confidence 444555555656778888999999999 99999999999888877777666521 0
Q ss_pred hhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHH
Q 017012 140 KAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAA 219 (379)
Q Consensus 140 ~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~ 219 (379)
.|. ++ +.|++ ..+-........-..+.|.++ +|+.+..|+..++.++|..+|+.++.
T Consensus 97 -------------~~~----ll--~~r~l---~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~ 153 (393)
T PRK09705 97 -------------SAL----LL--SSALL---GGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITP 153 (393)
T ss_pred -------------hHH----HH--HHHHH---HHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 120 11 11331 111122222233356788886 77889999999999999999999888
Q ss_pred HHH
Q 017012 220 GMA 222 (379)
Q Consensus 220 ~la 222 (379)
.+.
T Consensus 154 ~l~ 156 (393)
T PRK09705 154 WLV 156 (393)
T ss_pred HHH
Confidence 776
No 65
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.54 E-value=9.1e-05 Score=75.87 Aligned_cols=154 Identities=14% Similarity=0.110 Sum_probs=104.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhhccchhhcccCcc--chhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHH
Q 017012 25 HETSALLHSSSCFFFILSAYFVVLPLRDEGAISLGLS--KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRF 102 (379)
Q Consensus 25 ~E~~~~l~~~l~~F~il~~y~ilrpird~l~vs~Gae--~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~ 102 (379)
+.++.+..+.+..|+..+.+...-++-+.+.-..|.+ +.-++.......+.+..++.|+++| |++||+++.+....
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGD--RYGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCcHHHHHHHHHH
Confidence 3444555666667777777777777766665444443 4455555666778888999999999 99999988776655
Q ss_pred HHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHH
Q 017012 103 FSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISS 182 (379)
Q Consensus 103 f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~sl 182 (379)
+++..++.++.- + .| .+. ++..+...........
T Consensus 95 ~~~~~~~~~~~~--~-----------------------------------~~-----~l~----~~~~l~G~~~~~~~~~ 128 (496)
T PRK03893 95 FSVGTLACGFAP--G-----------------------------------YW-----TLF----IARLVIGMGMAGEYGS 128 (496)
T ss_pred HHHHHHHHHHHh--H-----------------------------------HH-----HHH----HHHHHHHHHHHHHHHH
Confidence 554444443310 0 12 111 2222333333444556
Q ss_pred HHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH
Q 017012 183 TWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 183 fW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~ 226 (379)
...++.|.++.++..|.+++...+.++|.++|+.+.+.+. ..+.
T Consensus 129 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 173 (496)
T PRK03893 129 SATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGW 173 (496)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 6788999999999999999999999999999999988876 4443
No 66
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.53 E-value=9.2e-05 Score=74.20 Aligned_cols=127 Identities=14% Similarity=0.066 Sum_probs=79.0
Q ss_pred hccchhhcccCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchh
Q 017012 49 PLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESL 128 (379)
Q Consensus 49 pird~l~vs~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~ 128 (379)
++++.+.++ .+++.++..+.+....+..++.|+++| |++||+++......++...+.. . ...
T Consensus 16 ~i~~~~~~s--~~~~g~~~s~~~~g~~i~~~~~G~l~D--r~grr~~~~~~~~~~~~~~~~~---~--~~~--------- 77 (368)
T TIGR00903 16 LVAEDIDVS--KEELGLLAITYPAAFLALTIPSGLLLD--RAFKRWFLFGSLATFAAAAGRL---L--DPF--------- 77 (368)
T ss_pred HHHHHhCcC--HHHHHHHHHHHHHHHHHHHHHHHHHHH--HccchHHHHHHHHHHHHHHHHH---H--Hhc---------
Confidence 444444443 445556544556667788888999999 9999887654443332211100 1 100
Q ss_pred ccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHH
Q 017012 129 DAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGAT 208 (379)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~ 208 (379)
+ .+ +++ +.|++ ..........-+..++|.++.+|+.|..++...+.+
T Consensus 78 ---------~--------------~~----~l~--~~R~l----~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~ 124 (368)
T TIGR00903 78 ---------N--------------YE----WLL--ACQLL----AALGQPFLLNAFAPAASQIREERRDLVISLLSFAMY 124 (368)
T ss_pred ---------c--------------HH----HHH--HHHHH----HHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 0 11 111 22442 222222234556777899999999999999999999
Q ss_pred HHHHHhHHHHHHHH-HHhH
Q 017012 209 LGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 209 lG~I~G~~l~~~la-~~g~ 226 (379)
+|.++|+.++..+. +.|-
T Consensus 125 lG~~l~~~~~~~l~~~~gW 143 (368)
T TIGR00903 125 LGIIFALAAGLKIYTAGGL 143 (368)
T ss_pred HHHHHHHHHHHHHHHccch
Confidence 99999999988886 4453
No 67
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.53 E-value=0.00019 Score=71.86 Aligned_cols=157 Identities=13% Similarity=0.066 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhcc-cC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHH-HHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIH-RFFSV 105 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs-~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~-~~f~~ 105 (379)
....++..|+...+.....|.-.....+ .| .+++-.+.........+..++.+.++| |++|||.+.+.. ...++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~d--r~g~r~~~~~~~~~~~~~ 94 (393)
T PRK15011 17 STAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSD--KRGDRKSLIVFCCLLGVL 94 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccchhHHHHHHHHHHHH
Confidence 3334445677777777777755554433 33 344444444445667777788877799 999998654332 22112
Q ss_pred HHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Q 017012 106 SLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWA 185 (379)
Q Consensus 106 ~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~ 185 (379)
...++++ . . + .|. ++. +++. ..............
T Consensus 95 ~~~~~~~----~-~-------------------------~-------~~~----l~~-~~~~----~~~~~~~~~~~~~~ 128 (393)
T PRK15011 95 ACTLFAW----N-R-------------------------N-------YFV----LLF-VGVF----LSSFGSTANPQMFA 128 (393)
T ss_pred HHHHHHH----h-h-------------------------H-------HHH----HHH-HHHH----HHHHHHhhHHHHHH
Confidence 1222221 1 0 0 121 111 1111 22333333334555
Q ss_pred HHHhhcCccchh--HHHHHHHHHHHHHHHHhHHHHHHHH-HHhHH-HHHHHHH
Q 017012 186 RVIDVMDSESGS--RLFGFIGAGATLGQLFGSLFAAGMA-FLGPY-LLLFAAC 234 (379)
Q Consensus 186 ~~~di~~~~eak--R~fgligag~~lG~I~G~~l~~~la-~~g~~-lll~aa~ 234 (379)
.+.|..+.+++. .+.++.+++.++|.++|+.+++.+. ++|.. .+++.++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~ 181 (393)
T PRK15011 129 LAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAV 181 (393)
T ss_pred HHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHH
Confidence 666766555432 3347999999999999999999987 56753 4444333
No 68
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.51 E-value=9.8e-06 Score=87.10 Aligned_cols=290 Identities=11% Similarity=0.023 Sum_probs=143.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhh------c----hhc
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKL------E----SLD 129 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~------~----~~~ 129 (379)
..+.-++..+..+..++..++.+++.| |.+|+|.+.+....+++.-++|++..... ..|-+.. . ..+
T Consensus 67 s~~~G~i~s~~~i~~~~~~i~v~~~~~--r~~r~~~i~~g~ll~~lg~ll~alphf~~-~~y~~~~~~~~~~~~~~~~~~ 143 (633)
T TIGR00805 67 TSSSGLINGSYEIGNLLLIIFVSYFGT--KLHRPIVIGIGCAIMGLGSFLLSLPHFLS-GRYSYSTTVSSTGNLSSANSF 143 (633)
T ss_pred CCcceeeeehhhHHHHHHHHHHHHhhc--ccCcceEEEecHHHHHHHHHHHhChHHhc-CCccccccccccccccccccc
Confidence 333444443445667788889999999 99999998887777777777776643221 0010000 0 000
Q ss_pred cccCC--ccCCch--hhhccCCCC-CCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHH
Q 017012 130 AVSSN--AKEDPK--AAVDQGSTA-NSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIG 204 (379)
Q Consensus 130 ~~~~~--~~~~~~--~~~~~~~~~-~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fglig 204 (379)
.-..+ +..+++ ......... +. .| ....++|++ .++-......+-..++.|.++.+++.+..|++.
T Consensus 144 ~c~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~r~l---~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~ 214 (633)
T TIGR00805 144 LCMENLTQALRPTQCPSECQKQHKESL-MW-----LLFLVSQLL---RGIGATPIFPLGISYIDDFAKSKNSPLYIGILE 214 (633)
T ss_pred cccCCCCCCccccccccccccccCCCc-ee-----hhhHHHHHH---HhccCCcchhcCchhhhccCCccccHHHHHHHH
Confidence 00000 000000 000000000 00 11 111122331 222233344567799999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHH----------------------HhHH--HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 017012 205 AGATLGQLFGSLFAAGMAF----------------------LGPY--LLLFAACLMELAAQSSKGIYKEIPRRPEELPPL 260 (379)
Q Consensus 205 ag~~lG~I~G~~l~~~la~----------------------~g~~--lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~ 260 (379)
++..+|..+|+.+++.+.. +|.| .+++.+++..+.++....+.+...+..
T Consensus 215 ~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~------ 288 (633)
T TIGR00805 215 SIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEG------ 288 (633)
T ss_pred HHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcc------
Confidence 9999999999999988762 1222 244444333333332222212111000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017012 261 RKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTV 340 (379)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~ 340 (379)
+... .+.. +.+. ..++.. +.. .+......+....++.++++|..+...+..++......-...-.-.+.++.+
T Consensus 289 ~~~~--~~~~--~~~~-~~~~~~-~~~-~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~ 361 (633)
T TIGR00805 289 KRVN--VDVH--ETEK-LEKSED-KSR-KKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQY 361 (633)
T ss_pred cccc--hhhh--hhhc-cccccc-ccc-hhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 0000 0000 0000 000000 000 0000011134567888999998887776666554443333332333445455
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 341 SSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 341 ~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
..+...+ |.+....++...+++.++.|++++|++
T Consensus 362 g~s~~~a---g~l~~~~~i~~~~vG~~l~G~l~~r~~ 395 (633)
T TIGR00805 362 GISSAEA---NFLIGVVNLPAAGLGYLIGGFIMKKFK 395 (633)
T ss_pred CCcHHHH---HHHhhhhhhhHHHHHHhhhhheeeeec
Confidence 5443333 444455555555667777889988876
No 69
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.50 E-value=2.7e-05 Score=80.22 Aligned_cols=250 Identities=15% Similarity=0.170 Sum_probs=125.4
Q ss_pred chhhcccCccchhHHHHHHHHHHHHHHHHHHHhhcC--CCCCchhHHHH-HHHHHHHHHHHHHHHHhhhcccchhhhchh
Q 017012 52 DEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSL--PNLSKAKALVL-IHRFFSVSLLVFFLLWQSSSIGYLSKLESL 128 (379)
Q Consensus 52 d~l~vs~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~--~r~~r~rv~~~-~~~~f~~~~llfa~~~~~~~~~~~~~~~~~ 128 (379)
|.++++ +..+-.++...-+.-.+..|+.|+++|. .|+||||-+.+ ....++ +.|.+++.+ ++ .
T Consensus 35 ~v~Gls--~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~---i~~~llf~~--p~----~--- 100 (473)
T PRK10429 35 DVVGLS--VGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANS---VVLFLLFSA--HL----F--- 100 (473)
T ss_pred HhcCCC--HHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHH---HHHHHHHcC--CC----C---
Confidence 544444 3344455666677788899999999992 25688654432 222222 222222211 10 0
Q ss_pred ccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc-CccchhHHHHHHHHHH
Q 017012 129 DAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVM-DSESGSRLFGFIGAGA 207 (379)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~-~~~eakR~fgligag~ 207 (379)
+ . .+ ++.|. .+.|+...+...+...-+++...|++ +.+|+.|+++....++
T Consensus 101 ----------------~----~--~~---~~~~~---~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~ 152 (473)
T PRK10429 101 ----------------E----G--TA---QYVFV---CVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFA 152 (473)
T ss_pred ----------------C----c--cH---HHHHH---HHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHH
Confidence 0 0 01 01111 13444334333334446889999999 7999999999989999
Q ss_pred HHHHHHhHHHHHHHH-HHh---H-H-HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 017012 208 TLGQLFGSLFAAGMA-FLG---P-Y-LLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKV 281 (379)
Q Consensus 208 ~lG~I~G~~l~~~la-~~g---~-~-lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 281 (379)
++|+++++.++..+. .+| . . ....+.+...+...+..........+ + + +++. +
T Consensus 153 ~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~----~----~---~~~~----~------ 211 (473)
T PRK10429 153 SLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEV----Y----S---SDNQ----V------ 211 (473)
T ss_pred HHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceec----C----C---cccc----c------
Confidence 998888766655432 222 1 1 11222222212121111111111100 0 0 0000 0
Q ss_pred CCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 017012 282 PSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFI 361 (379)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~ 361 (379)
+ +++.+.+..+.++.++++|.++.+++..+++.+......--.....+....++ ...+.+....++..
T Consensus 212 --~------~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~----~~~~~~~~~~~i~~ 279 (473)
T PRK10429 212 --S------AEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDA----DLFPYYLSYAGAAN 279 (473)
T ss_pred --c------ccccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCH----HHHHHHHHHHHHHH
Confidence 0 00112267899999999999887777666665543332211111111111222 23355555555666
Q ss_pred HHHHHHhHHHHHHHhC
Q 017012 362 LAGQLTLTGTSFLLLG 377 (379)
Q Consensus 362 l~~qlf~t~~llrrlG 377 (379)
++.+.+ .+++.+|+|
T Consensus 280 ii~~~~-~~~l~~r~g 294 (473)
T PRK10429 280 LVTLIL-FPRLVKSLS 294 (473)
T ss_pred HHHHHH-HHHHHHHcC
Confidence 666665 479999887
No 70
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.50 E-value=1.6e-05 Score=77.47 Aligned_cols=112 Identities=13% Similarity=0.082 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCC
Q 017012 71 LILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTAN 150 (379)
Q Consensus 71 ~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (379)
+....+..++.|+++| |++|||++......+.+..+++++.-... + . .
T Consensus 45 ~~~~~i~~~~~G~l~d--r~g~r~~l~~~~~~~~~~~~~~~~~~~~~--------------------~---~--~----- 92 (394)
T TIGR00883 45 FLARPLGAIVFGHFGD--RIGRKKTLVITLLMMGIGTLLIGLLPSYA--------------------T---I--G----- 92 (394)
T ss_pred HHHhhhHHHHhhhhhh--hhhhHHHHHHHHHHHHHHHHHHhhCCChh--------------------h---h--H-----
Confidence 3344567899999999 99999998877666555544444311000 0 0 0
Q ss_pred CCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 151 SADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 151 ~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.|.. |.+. +.|. ...+.........-.++.|.++.+|+.+..++...+..+|.++|+.++..+.
T Consensus 93 --~~~~--~~~~-~~r~---l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~ 156 (394)
T TIGR00883 93 --IWAP--ILLL-LARL---IQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLS 156 (394)
T ss_pred --HHHH--HHHH-HHHH---HHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1100 0011 1111 1111111112233457899999999999999999999999999998877654
No 71
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.49 E-value=4.1e-05 Score=77.81 Aligned_cols=69 Identities=9% Similarity=0.002 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhcc---cCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCc-hhHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAIS---LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSK-AKALVLIH 100 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs---~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r-~rv~~~~~ 100 (379)
...+.+++|+....|.+.-|.-.....+ .+.+++-++........++..|+.|+++| |++| |+++.+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~d--r~g~~r~~~~~~~ 76 (418)
T TIGR00889 4 TAKLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIAD--KWLSAQKVYAVCH 76 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcccHHHHHHHH
Confidence 3445667777777777776655444444 34556666666778899999999999999 9966 55555443
No 72
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.48 E-value=5.4e-05 Score=74.21 Aligned_cols=128 Identities=11% Similarity=0.051 Sum_probs=79.4
Q ss_pred HHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccch
Q 017012 45 FVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYL 122 (379)
Q Consensus 45 ~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~ 122 (379)
...-|+-+.+.-+.| .++.-++.........+..++.|+++| |++|||++.+....+.+..+.+ . . +
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~~~~~~~~~---~--~-~--- 85 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLAR--RFGEERSVAAGLLLIAAGILIR---S--A-P--- 85 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHH--HhCchHHHHHHHHHHHHHHHHH---H--h-c---
Confidence 444454444444433 444555566667788899999999999 9999999877554433322222 1 1 1
Q ss_pred hhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHH
Q 017012 123 SKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGF 202 (379)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgl 202 (379)
+ .| .+. +.|.+ ..+............+.|.++ +++.|..++
T Consensus 86 ---------------~--------------~~-----~l~-~~~~~---~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~ 126 (355)
T TIGR00896 86 ---------------G--------------TA-----LLF-AGTAL---IGVGIAIINVLLPSLIKRDFP-QRVGLMTGL 126 (355)
T ss_pred ---------------c--------------HH-----HHH-HHHHH---HHHHHHHHhccchHHHHHhCc-chhhHHHHH
Confidence 0 12 111 11221 122122223345667788885 678889999
Q ss_pred HHHHHHHHHHHhHHHHHHHH
Q 017012 203 IGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 203 igag~~lG~I~G~~l~~~la 222 (379)
.+.+.++|..+|+.+++.+.
T Consensus 127 ~~~~~~~g~~i~~~~~~~l~ 146 (355)
T TIGR00896 127 YSMALMGGAALAAAATVPLA 146 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888776
No 73
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.47 E-value=0.00034 Score=69.65 Aligned_cols=258 Identities=15% Similarity=0.021 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhcccC--ccchhHHHH--HHHHHHHHHHHHHHH-hhcCCCCCchhHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFV--GSLILTLIAAPVSTL-IFSLPNLSKAKALVLIHRFFS 104 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs~G--ae~lp~l~~--~~~~~~ll~~~iy~~-L~~~~r~~r~rv~~~~~~~f~ 104 (379)
...++...|.-...+.+..|.-+...-+.| .+++-.+.. .-....++.+|+.++ .+| |++|||...+.....
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~--~~g~r~~~i~~~~~~- 79 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSW--RLGRRRSWVLPMQCL- 79 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccc--cCCcchhHHHHHHHH-
Confidence 445666677778888888888877776644 444544422 225578899999966 688 999988853332221
Q ss_pred HHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q 017012 105 VSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTW 184 (379)
Q Consensus 105 ~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW 184 (379)
....+.++....... + . ..| ... +. + +.+.+ +..-
T Consensus 80 ~~~~~~~~~~~~~~~------------------~------~------~~~-----~~~----~~--~--~~~~~--~a~~ 114 (390)
T TIGR02718 80 VSACLASLALVGPDV------------------A------G------AGW-----AVG----LL--A--CASLA--SATQ 114 (390)
T ss_pred HHHHHHHHHcCCcch------------------h------h------HHH-----HHH----HH--H--HHHHH--HHHH
Confidence 111111221110000 0 0 012 111 10 0 11111 1111
Q ss_pred HHHHhhcC-ccchhHH----HHHHHHHHHHHHHHhHHHHHHHH-HHhHH-HHHHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 017012 185 ARVIDVMD-SESGSRL----FGFIGAGATLGQLFGSLFAAGMA-FLGPY-LLLFAACLMELAAQSSKGIYKEIPRRPEEL 257 (379)
Q Consensus 185 ~~~~di~~-~~eakR~----fgligag~~lG~I~G~~l~~~la-~~g~~-lll~aa~ll~l~~~~~~~l~~~~~~~~~~~ 257 (379)
..++|... .+..+|- -+....|..+|.++|+...+.+. ++|.. .+++.+++..++......+ .++.
T Consensus 115 d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~---~~~~---- 187 (390)
T TIGR02718 115 DIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWL---KDRA---- 187 (390)
T ss_pred HHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc---CCCC----
Confidence 22344332 2222333 34455666777888777666665 56653 5554444443333332211 1110
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017012 258 PPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIA 337 (379)
Q Consensus 258 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~ 337 (379)
++++ +. ++ +..+.++.++++|.+..+....+++.......+--...+.+
T Consensus 188 ---------~~~~--~~-----------------~~---~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 236 (390)
T TIGR02718 188 ---------VASP--EA-----------------PL---ARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLV 236 (390)
T ss_pred ---------cCcc--cc-----------------ch---hhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 0000 00 00 11234667888888877776666666544443333334444
Q ss_pred HhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 338 MTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 338 ~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
+. .-+.+ ..|.+....+++..+++.+..|++.+|+|
T Consensus 237 ~~-G~s~~---~ig~~~~~~~~~~~~~g~~~~g~l~~r~g 272 (390)
T TIGR02718 237 DA-GWPLE---WIGRLGMAGGAVTVLLGCGGGAWLVRRAG 272 (390)
T ss_pred hc-CCCHH---HHHHHHhHHHHHHHHHHHHHHHHHHHHhh
Confidence 43 22222 33677777777777777777899999987
No 74
>PRK09669 putative symporter YagG; Provisional
Probab=98.46 E-value=5.1e-05 Score=77.24 Aligned_cols=130 Identities=15% Similarity=0.157 Sum_probs=73.5
Q ss_pred cchhhcccCccchhHHHHHHHHHHHHHHHHHHHhhcC--CCCCchhHHHH-HHHHHHHHHHHHHHHHhhhcccchhhhch
Q 017012 51 RDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSL--PNLSKAKALVL-IHRFFSVSLLVFFLLWQSSSIGYLSKLES 127 (379)
Q Consensus 51 rd~l~vs~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~--~r~~r~rv~~~-~~~~f~~~~llfa~~~~~~~~~~~~~~~~ 127 (379)
.|.+.++ ....-.++....+.-.+..|+.|+++|. .|+||||-..+ ....+++ .+.+.+. . +++
T Consensus 37 t~~~gls--~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i---~~~l~f~-~-p~~------ 103 (444)
T PRK09669 37 TDVFGLS--AAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGV---VCLLTFY-T-PDF------ 103 (444)
T ss_pred HHhcCCC--HHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHH---HHHHHHh-C-CCC------
Confidence 3555554 3334455666677788999999999991 23777665433 2222221 2222221 1 100
Q ss_pred hccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc-CccchhHHHHHHHHH
Q 017012 128 LDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVM-DSESGSRLFGFIGAG 206 (379)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~-~~~eakR~fgligag 206 (379)
+...++.|. .+.|+...+....+..-+++..+|++ +.+|+.|+.+.-..+
T Consensus 104 --------------------------~~~~~~~~~---~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~ 154 (444)
T PRK09669 104 --------------------------GATGKIIYA---CVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFAL 154 (444)
T ss_pred --------------------------CcchHHHHH---HHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHH
Confidence 000000111 13443333322233335778999998 678899999999999
Q ss_pred HHHHHHHhHHHHHHHH
Q 017012 207 ATLGQLFGSLFAAGMA 222 (379)
Q Consensus 207 ~~lG~I~G~~l~~~la 222 (379)
+++|.++++.++..+.
T Consensus 155 ~~~G~~i~~~~~~pl~ 170 (444)
T PRK09669 155 SFIGGLIVSVIALPLV 170 (444)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999988887665554
No 75
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.44 E-value=3.8e-05 Score=76.53 Aligned_cols=114 Identities=14% Similarity=0.080 Sum_probs=79.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCc
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDP 139 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (379)
.....++.........+..|+.|+++| |++||+++.+....+++..++..+.- ... +
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d--~~grr~~~~~~~~~~~~~~~~~~~~~--~~~------------------~- 126 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSD--RFGRKKSLLIIALLFVIGAILMGLAA--FAL------------------S- 126 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhh--hhhhHHHHHHHHHHHHHHHHHHHHhc--ccc------------------c-
Confidence 345556666777889999999999999 99999998776666554444443211 000 0
Q ss_pred hhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHH
Q 017012 140 KAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFA 218 (379)
Q Consensus 140 ~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~ 218 (379)
.| .+. +.|.+ ..+-..........+++|.++.+++.+..++...+.++|.++|+.++
T Consensus 127 -------------~~-----~~~-~~r~l---~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 127 -------------VE-----MLI-VGRVL---LGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred -------------hH-----HHH-HHHHH---HHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 11 121 11222 22223334457788999999999999999999999999999999987
No 76
>TIGR00898 2A0119 cation transport protein.
Probab=98.43 E-value=4.6e-06 Score=85.83 Aligned_cols=114 Identities=15% Similarity=0.009 Sum_probs=78.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchh
Q 017012 62 KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKA 141 (379)
Q Consensus 62 ~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (379)
...++....++..++..++.|+++| |+|||+++.+.....++..++.++ . + +
T Consensus 128 ~~~~~~s~~~~g~~~g~~~~g~l~D--r~Grr~~~~~~~~~~~i~~~~~~~----~-~------------------~--- 179 (505)
T TIGR00898 128 KVDLTQSCFFVGVLLGSFVFGYLSD--RFGRKKVLLLSTLVTAVSGVLTAF----S-P------------------N--- 179 (505)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhhh--hccchHHHHHHHHHHHHHHHHHHH----c-c------------------c---
Confidence 3444455667788889999999999 999999987765554443333322 1 1 0
Q ss_pred hhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 142 AVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 142 ~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~l 221 (379)
.| .+. ++....++.........+.+++|.++.+++.+..++...+..+|.++++.++..+
T Consensus 180 -----------~~-----~~~----~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 239 (505)
T TIGR00898 180 -----------YT-----VFL----VFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI 239 (505)
T ss_pred -----------HH-----HHH----HHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 12 222 2222234334445668889999999999999999999999999999999887655
Q ss_pred HH
Q 017012 222 AF 223 (379)
Q Consensus 222 a~ 223 (379)
..
T Consensus 240 ~~ 241 (505)
T TIGR00898 240 PD 241 (505)
T ss_pred hH
Confidence 43
No 77
>PRK11462 putative transporter; Provisional
Probab=98.40 E-value=0.00043 Score=71.42 Aligned_cols=129 Identities=16% Similarity=0.124 Sum_probs=76.3
Q ss_pred chhhcccCccchhHHHHHHHHHHHHHHHHHHHhhc--CCCCCchhHHHHHHH-HHHHHHHHHHHHHhhhcccchhhhchh
Q 017012 52 DEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFS--LPNLSKAKALVLIHR-FFSVSLLVFFLLWQSSSIGYLSKLESL 128 (379)
Q Consensus 52 d~l~vs~Gae~lp~l~~~~~~~~ll~~~iy~~L~~--~~r~~r~rv~~~~~~-~f~~~~llfa~~~~~~~~~~~~~~~~~ 128 (379)
|.++++ +...-.++..+-+.=.+.-|+.|.++| ..|+||||-...... .++ +.+.+++.+ +++
T Consensus 38 ~~~Gl~--~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~---i~~~llf~~--p~~------- 103 (460)
T PRK11462 38 DIFGIP--AGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFG---IVCVLAYST--PDL------- 103 (460)
T ss_pred HhhCCC--HHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHH---HHHHHHHhC--CCC-------
Confidence 655655 222333444445556688999999999 336788776544332 222 222223221 100
Q ss_pred ccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcC-ccchhHHHHHHHHHH
Q 017012 129 DAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMD-SESGSRLFGFIGAGA 207 (379)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~-~~eakR~fgligag~ 207 (379)
+ .+ +++.|. .+.|+...+.-.+...=+|+...++++ .+|+.++.+.-..++
T Consensus 104 ----------------s-------~~--~~~~y~---~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~ 155 (460)
T PRK11462 104 ----------------S-------MN--GKMIYA---AITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLA 155 (460)
T ss_pred ----------------C-------cc--hHHHHH---HHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 0 00 011222 134443343333344478899999988 888899999999999
Q ss_pred HHHHHHhHHHHHHHH
Q 017012 208 TLGQLFGSLFAAGMA 222 (379)
Q Consensus 208 ~lG~I~G~~l~~~la 222 (379)
++|..+++.++..+.
T Consensus 156 ~iG~~~~~~~~~plv 170 (460)
T PRK11462 156 TAGGMLSTVLMMPLV 170 (460)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999888866554
No 78
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.37 E-value=0.00034 Score=71.02 Aligned_cols=113 Identities=13% Similarity=0.040 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccC
Q 017012 67 FVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQG 146 (379)
Q Consensus 67 ~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (379)
+..++....+..++.|+++| |+||||++.+....+.+.-++.++.- + |
T Consensus 69 ~~~~~~~~~ig~~~~G~l~D--r~Grr~~l~~~~~~~~~~~~~~~~~~--~---~------------------------- 116 (432)
T PRK10406 69 FAAGFLMRPIGGWLFGRIAD--KHGRKKSMLISVCMMCFGSLVIACLP--G---Y------------------------- 116 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHH--hcCcHHHHHHHHHHHHHHHHHHhhcC--C---c-------------------------
Confidence 44556666788899999999 99999999888877766655554421 1 0
Q ss_pred CCCCCCcccc--ccchhhhhhHHHHHHHHHH-HHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 147 STANSADWGD--HGWFYVSVRMGFFLWVALL-NLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 147 ~~~~~~~w~~--~~w~~~~~~~~Fyvw~~v~-~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.+.. .-+.+. +.|. +.++ ..........+++|.++++|+.+..++...+...|.++|+.+...+.
T Consensus 117 ------~~~~~~~~~~l~-~~R~----l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~ 184 (432)
T PRK10406 117 ------ETIGTWAPALLL-LARL----FQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQ 184 (432)
T ss_pred ------hhHHHHHHHHHH-HHHH----HHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 000111 1122 2222 22334466688999999999999999999888888888877655544
No 79
>PRK15075 citrate-proton symporter; Provisional
Probab=98.35 E-value=0.00026 Score=71.85 Aligned_cols=158 Identities=9% Similarity=0.064 Sum_probs=90.8
Q ss_pred ccCcCchhHHH--HHHHHHHHHHHHHHHhhhccchhhcccCccc--hhHHH------HHHHHHHHHHHHHHHHhhcCCCC
Q 017012 21 TLHPHETSALL--HSSSCFFFILSAYFVVLPLRDEGAISLGLSK--LPGLF------VGSLILTLIAAPVSTLIFSLPNL 90 (379)
Q Consensus 21 ~i~~~E~~~~l--~~~l~~F~il~~y~ilrpird~l~vs~Gae~--lp~l~------~~~~~~~ll~~~iy~~L~~~~r~ 90 (379)
|-..+|.|+.. -+++..|+.......+-+..+.+.-+.|.+. ...+. ..+++...+..++.|+++| |+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~D--r~ 83 (434)
T PRK15075 6 PAASRESKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYID--RV 83 (434)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhh--hh
Confidence 44556766543 2333345555555555555555544433222 22221 1222223345678899999 99
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccc---hhhhhhHH
Q 017012 91 SKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGW---FYVSVRMG 167 (379)
Q Consensus 91 ~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w---~~~~~~~~ 167 (379)
+|||++......+.+..+++++.- + .|..+.| .+. +.|+
T Consensus 84 Grr~~l~~~~~~~~~~~~l~~~~~--~-----------------------------------~~~~~~~~~~~l~-~~R~ 125 (434)
T PRK15075 84 GRRKGLIVTLSIMASGTLLIAFVP--G-----------------------------------YATIGLAAPLLVL-LGRL 125 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCC--c-----------------------------------HHHHHHHHHHHHH-HHHH
Confidence 999999887776665555554421 0 1100000 001 1122
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 168 FFLWVALL-NLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 168 Fyvw~~v~-~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
+... ..........+++|.++.+++.|..++.+.+.++|.++|+.+++.+.
T Consensus 126 ----l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~ 177 (434)
T PRK15075 126 ----LQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLN 177 (434)
T ss_pred ----HhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1221 11123344678999999999999999999999999888888877663
No 80
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.29 E-value=0.0015 Score=67.95 Aligned_cols=147 Identities=11% Similarity=0.077 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhc-cc--CccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAI-SL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~v-s~--Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~ 106 (379)
+....+.++.-....++.-|+--.+-- +. ..+++.++.........+...++|+++| |+|.|+++.+.....++.
T Consensus 36 l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~D--r~G~R~v~~~~~ll~~i~ 113 (462)
T PRK15034 36 LWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVP--IFGGRRWTVFSTAILIIP 113 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHH
Confidence 444444444444555555554333321 12 2334555444334455566677899999 999999988877776655
Q ss_pred HHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 017012 107 LLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWAR 186 (379)
Q Consensus 107 ~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~ 186 (379)
.+..++..... .+ + .| .+. +......+ .....+.....
T Consensus 114 ~~~~~~a~~~~-------------------~~------s-------~~-----~ll----i~r~l~Gi-gg~~f~~~~~~ 151 (462)
T PRK15034 114 CVWLGIAVQNP-------------------NT------P-------FG-----IFI----VIALLCGF-AGANFASSMGN 151 (462)
T ss_pred HHHHHHHHccc-------------------CC------C-------HH-----HHH----HHHHHHHH-HHHhHHHHHHH
Confidence 55444422100 00 0 12 111 11111222 23344456667
Q ss_pred HHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHH
Q 017012 187 VIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAG 220 (379)
Q Consensus 187 ~~di~~~~eakR~fgligag~~lG~I~G~~l~~~ 220 (379)
+++.|+.+|..+..|+...++++|..+++.++..
T Consensus 152 vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~ 185 (462)
T PRK15034 152 ISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPL 185 (462)
T ss_pred HHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 8999999999999999988888888776655543
No 81
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.27 E-value=0.00066 Score=70.26 Aligned_cols=115 Identities=10% Similarity=0.094 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCC
Q 017012 68 VGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGS 147 (379)
Q Consensus 68 ~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (379)
...++...+..+++|+++| |+|||+++.+....+++..+++++.-.....|
T Consensus 64 ~~~~l~~~ig~~~~G~l~D--r~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g--------------------------- 114 (490)
T PRK10642 64 SVPFLIRPLGGLFFGMLGD--KYGRQKILAITIVIMSISTFCIGLIPSYATIG--------------------------- 114 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH--hcccHHHHHHHHHHHHHHHHHHHhcccHHHHH---------------------------
Confidence 3445677788999999999 99999999998888877766666532100000
Q ss_pred CCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 148 TANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 148 ~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.|- -+.+. +.|++ ..+-........-.+++|.++.+++.+.-++..+|+.+|.++|+.+...+.
T Consensus 115 -----~~a--~~~l~-~~R~l---~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~ 178 (490)
T PRK10642 115 -----IWA--PILLL-LCKMA---QGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLIS 178 (490)
T ss_pred -----HHH--HHHHH-HHHHH---HHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 110 00111 12331 222223334456678999999999999999999999999999987765553
No 82
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.26 E-value=0.00053 Score=71.55 Aligned_cols=165 Identities=14% Similarity=0.115 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhcc-cCccc--hhHHHHHHHHHHHHHHHHHHHhhcCCC-CCchhHHHHHHHHHH
Q 017012 29 ALLHSSSCFFFILSAYFVVLPLRDEGAIS-LGLSK--LPGLFVGSLILTLIAAPVSTLIFSLPN-LSKAKALVLIHRFFS 104 (379)
Q Consensus 29 ~~l~~~l~~F~il~~y~ilrpird~l~vs-~Gae~--lp~l~~~~~~~~ll~~~iy~~L~~~~r-~~r~rv~~~~~~~f~ 104 (379)
.+..+++..+|.-++|+..++.-.....+ .|.+. ..++......+.....++.|+++| | +|||+.+.+....++
T Consensus 22 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaD--r~~G~r~~~~~g~~~~~ 99 (500)
T PRK09584 22 AFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGD--KVLGTKRVIMLGAIVLA 99 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccchHHHHHHHHHHHH
Confidence 46677778888999998888864444433 44332 233333333344455678999999 9 599998887766665
Q ss_pred HHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q 017012 105 VSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTW 184 (379)
Q Consensus 105 ~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW 184 (379)
+..+++++. . . + .+ +++. ++.. ..+-+.......-
T Consensus 100 ig~~l~~~~---~-~------------------~--------------~~----~l~~--~~~l---~gig~g~~~~~~~ 134 (500)
T PRK09584 100 IGYALVAWS---G-H------------------D--------------AG----IVYM--GMAT---IAVGNGLFKANPS 134 (500)
T ss_pred HHHHHHHHh---c-c------------------c--------------HH----HHHH--HHHH---HHHhhhcccCCHH
Confidence 554444431 0 0 0 11 0111 1121 1222222223444
Q ss_pred HHHHhhcCccchh--HHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHH
Q 017012 185 ARVIDVMDSESGS--RLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAA 240 (379)
Q Consensus 185 ~~~~di~~~~eak--R~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa~ll~l~~ 240 (379)
++++|.++.++.+ +.+++...+.++|..+||.+++++. ..|. ..+.+.++...++.
T Consensus 135 ~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 135 SLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 6789999876654 4799999999999999999999987 4564 34455454443443
No 83
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.23 E-value=7.6e-05 Score=81.63 Aligned_cols=124 Identities=15% Similarity=0.173 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCC
Q 017012 71 LILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTAN 150 (379)
Q Consensus 71 ~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (379)
.+..++..++.++++| |+|||+++.+.....+++.+++++.- .
T Consensus 605 ~l~~i~G~il~g~L~D--r~GRr~~l~~~~~lsai~~ll~~~~~--s--------------------------------- 647 (742)
T TIGR01299 605 TLAVLPGNIVSALLMD--KIGRLRMLAGSMVLSCISCFFLSFGN--S--------------------------------- 647 (742)
T ss_pred HHHHHHHHHHHHHHHH--HhCCHHHHHHHHHHHHHHHHHHHHHc--c---------------------------------
Confidence 4567788899999999 99999998665555444444333211 1
Q ss_pred CCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHhH-HHH
Q 017012 151 SADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFLGP-YLL 229 (379)
Q Consensus 151 ~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~~g~-~ll 229 (379)
.+ +.. ++.+....+........+++++|+++++++.+.+|+.++++.+|.++||.+++.+...+. .++
T Consensus 648 --~~----~ll-----~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf 716 (742)
T TIGR01299 648 --ES----AMI-----ALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPI 716 (742)
T ss_pred --HH----HHH-----HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 11 011 111112333334456788999999999999999999999999999999999988765544 355
Q ss_pred HHHHHHHHHHHHH
Q 017012 230 LFAACLMELAAQS 242 (379)
Q Consensus 230 l~aa~ll~l~~~~ 242 (379)
+++++++++++++
T Consensus 717 ~i~a~~lll~~ll 729 (742)
T TIGR01299 717 LFASAALACGGLL 729 (742)
T ss_pred HHHHHHHHHHHHH
Confidence 5555444455444
No 84
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.20 E-value=7.3e-05 Score=77.92 Aligned_cols=163 Identities=11% Similarity=0.050 Sum_probs=103.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhccchhhcc-cC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCC-CCchhHHHHHHHH
Q 017012 27 TSALLHSSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPN-LSKAKALVLIHRF 102 (379)
Q Consensus 27 ~~~~l~~~l~~F~il~~y~ilrpird~l~vs-~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r-~~r~rv~~~~~~~ 102 (379)
.+.++..+..-++--++||..++.--....+ .| .+...++..+......+..++.|+++| | +||||++.+....
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laD--r~~G~r~~~~~g~~~ 90 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGD--HLLGTKRTIVLGAIV 90 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhh--hccchHHHHHHHHHH
Confidence 3456666667788889999888765444433 33 344555555555567777889999999 9 9999999988887
Q ss_pred HHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHH
Q 017012 103 FSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISS 182 (379)
Q Consensus 103 f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~sl 182 (379)
+++..+..++.. . . ... +++ ++.. ..+-+......
T Consensus 91 ~~~g~~~~~~~~--~-~---------------------------------~~l----l~~--~~~l---~~ig~g~~~~~ 125 (489)
T PRK10207 91 LAIGYFMTGMSL--L-K---------------------------------PDL----IFI--ALGT---IAVGNGLFKAN 125 (489)
T ss_pred HHHHHHHHHHhc--c-c---------------------------------hhH----HHH--HHHH---HHhccccccCC
Confidence 776665555421 1 0 010 111 1121 12111222222
Q ss_pred HHHHHHhhcCccchh--HHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHHH
Q 017012 183 TWARVIDVMDSESGS--RLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLM 236 (379)
Q Consensus 183 fW~~~~di~~~~eak--R~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa~ll 236 (379)
.=+++.|.++.++.+ +.|+..+.+.++|..+||.+++++. ++|- +.++++++.+
T Consensus 126 ~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~ 183 (489)
T PRK10207 126 PASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGL 183 (489)
T ss_pred HHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHH
Confidence 236799999888654 4799999999999999999999987 5664 3444444333
No 85
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.19 E-value=0.00035 Score=72.59 Aligned_cols=156 Identities=12% Similarity=0.066 Sum_probs=111.5
Q ss_pred ccCcCchhHHHHHHHHHHHHHHHHHHhhhccchhhcc----cCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCC--chh
Q 017012 21 TLHPHETSALLHSSSCFFFILSAYFVVLPLRDEGAIS----LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLS--KAK 94 (379)
Q Consensus 21 ~i~~~E~~~~l~~~l~~F~il~~y~ilrpird~l~vs----~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~--r~r 94 (379)
+-|.-+++......+..|+....+++.-|..+.-... .+++-.-++-.++.+...+.+|+||+-++ |.+ |++
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~--k~~~~k~P 104 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSN--KTGSVKKP 104 (488)
T ss_pred cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccc--ccCCcccC
Confidence 3444556677778888999999999999999887766 34555556666778899999999999999 776 777
Q ss_pred HHHHHHHHHHHHHHHH-HHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHH
Q 017012 95 ALVLIHRFFSVSLLVF-FLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVA 173 (379)
Q Consensus 95 v~~~~~~~f~~~~llf-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~ 173 (379)
++.-.+..++.+ +++ ++...+. + .+|. .. ++|+ ..
T Consensus 105 li~s~ii~~~g~-llY~~l~~~~~--------------------~-------------~~y~----mL--~~R~----l~ 140 (488)
T KOG2325|consen 105 LIVSFLIAIIGN-LLYLALAYVPN--------------------G-------------VKYL----ML--VARI----LT 140 (488)
T ss_pred HHHHHHHHHHHH-HHHHHHHhccc--------------------c-------------hHHH----HH--HHHH----Hc
Confidence 765444333222 223 2211111 0 0331 22 2355 34
Q ss_pred HHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 174 LLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 174 v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
+++.-+.+..=++++|...++|+.|-+..++.|..+|.++||.+...++
T Consensus 141 Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 141 GVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred CcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 5565677788899999999999999999999999999999999988775
No 86
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.17 E-value=0.00071 Score=70.11 Aligned_cols=164 Identities=14% Similarity=0.078 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhcc---cCcc--chhHHHHHHHHHHHHHHHHHHHhhcCCC-CCchhHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAIS---LGLS--KLPGLFVGSLILTLIAAPVSTLIFSLPN-LSKAKALVLIHRFF 103 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs---~Gae--~lp~l~~~~~~~~ll~~~iy~~L~~~~r-~~r~rv~~~~~~~f 103 (379)
+..+++..++--++|+...|.-.....+ .|.+ +.-++.........+..++.|+++| | +||||++.+.....
T Consensus 12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laD--r~~G~~~~l~~~~~~~ 89 (475)
T TIGR00924 12 LFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGD--RVWGTKKTMVLGGIVL 89 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHH--hhcchHHHHHHHHHHH
Confidence 4455556777788888887765544433 2322 3333444546678888999999999 9 89999988877666
Q ss_pred HHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHH
Q 017012 104 SVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISST 183 (379)
Q Consensus 104 ~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slf 183 (379)
++.++++++.- . .|. .+. ++.+ ..+-+.......
T Consensus 90 ~~g~~~~~~~~--~-----------------------------------~~~----~~~--~~~l---~g~g~g~~~~~~ 123 (475)
T TIGR00924 90 MLGHFMLAMSI--Y-----------------------------------PDL----IFY--GLGT---IAVGSGLFKANP 123 (475)
T ss_pred HHHHHHHHhcc--c-----------------------------------HhH----HHH--HHHH---HHhccccccCCH
Confidence 55555444310 0 120 111 1221 111122233355
Q ss_pred HHHHHhhcCccc---hhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHH
Q 017012 184 WARVIDVMDSES---GSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQ 241 (379)
Q Consensus 184 W~~~~di~~~~e---akR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa~ll~l~~~ 241 (379)
-++++|.++.+| +.+.|++...+.++|.++|+.+++.+. +.|. ..+.++++.+.++.+
T Consensus 124 ~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l 186 (475)
T TIGR00924 124 SSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLL 186 (475)
T ss_pred HHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 678999998876 444899999999999999999999887 4564 344444444444443
No 87
>PRK09952 shikimate transporter; Provisional
Probab=98.17 E-value=0.0011 Score=67.47 Aligned_cols=114 Identities=10% Similarity=-0.029 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCC
Q 017012 69 GSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGST 148 (379)
Q Consensus 69 ~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (379)
.++..+.+-.+++|+++| |+|||+++......+.+..+++++.-... +
T Consensus 72 ~~~~~~~~g~~~~G~l~D--r~Grr~~l~~~~~~~~~~~~~~~~~~~~~-----------------------~------- 119 (438)
T PRK09952 72 VGFLFRPLGGVVFGHFGD--RLGRKRMLMLTVWMMGIATALIGLLPSFS-----------------------T------- 119 (438)
T ss_pred HHHHHHhhHHHHHHHHHH--hhccHHHHHHHHHHHHHHHHHHhcCCcHH-----------------------H-------
Confidence 345556677788999999 99999999887777665555554421000 0
Q ss_pred CCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 149 ANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 149 ~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.+..--|.+. +.|. ...+-..........+++|.++.+++.+..+....|..+|.++|+.+...+.
T Consensus 120 ----~~~~~~~~l~-~~R~---l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~ 185 (438)
T PRK09952 120 ----IGWWAPVLLV-TLRA---IQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLIS 185 (438)
T ss_pred ----HHHHHHHHHH-HHHH---HHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000111 1122 1222112222344578999999999989999999999999999887776664
No 88
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.13 E-value=5.5e-05 Score=76.67 Aligned_cols=236 Identities=17% Similarity=0.208 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc--CCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhh
Q 017012 65 GLFVGSLILTLIAAPVSTLIFS--LPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAA 142 (379)
Q Consensus 65 ~l~~~~~~~~ll~~~iy~~L~~--~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (379)
.+....-+.-.+..|+.|.++| ..|+||||-+.+..... .-+.+.+++.+.+.+ .
T Consensus 41 ~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~--~~~~~~llf~~~p~~---------------------~ 97 (428)
T PF13347_consen 41 LILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAIL--LALSFFLLFSPPPAG---------------------L 97 (428)
T ss_pred HHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHH--HHHHHHHhhccccch---------------------h
Confidence 3444556678888999999999 33788887654433221 112222222211100 0
Q ss_pred hccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcC-ccchhHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 143 VDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMD-SESGSRLFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 143 ~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~-~~eakR~fgligag~~lG~I~G~~l~~~l 221 (379)
... . . ..| .+ +.|+..++...+...-+++..+|+++ .+|+.|+.+.-..++.+|.++.+.+...+
T Consensus 98 ~~~--~-~-~~~-----~~-----~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l 163 (428)
T PF13347_consen 98 SFT--A-K-LVW-----LF-----VFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPIL 163 (428)
T ss_pred hhh--h-H-HHH-----HH-----HHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhh
Confidence 000 0 0 012 22 34443355555556678999999997 57999999999999999997666666655
Q ss_pred H-HHh------HH--HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 017012 222 A-FLG------PY--LLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVK 292 (379)
Q Consensus 222 a-~~g------~~--lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (379)
. ..| .+ ...+.+++..++........|+ +. ++. + ++
T Consensus 164 ~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke--~~--------------~~~--~-----------------~~ 208 (428)
T PF13347_consen 164 VSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE--RS--------------VEV--T-----------------EQ 208 (428)
T ss_pred hhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee--cc--------------ccc--c-----------------cc
Confidence 4 333 11 1112222222222221111111 00 000 0 01
Q ss_pred CcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 017012 293 PHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTS 372 (379)
Q Consensus 293 ~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~l 372 (379)
+.+.+.++.++.++++|..+.+++..++..+..++.--...-+.+....++ + ..+.+..+..+.+++...+ .+++
T Consensus 209 ~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~---~~~~~~~~~~~~~~v~~~~-~~~l 283 (428)
T PF13347_consen 209 EKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-G---LISIFMLIFFVASIVGSPL-WGRL 283 (428)
T ss_pred ccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-h---hhHHHHHHHHHHHHHHHHH-HHHH
Confidence 112267788999999999987776666654433322222122223333343 2 2244444555555555444 4899
Q ss_pred HHHhC
Q 017012 373 FLLLG 377 (379)
Q Consensus 373 lrrlG 377 (379)
.||+|
T Consensus 284 ~~r~g 288 (428)
T PF13347_consen 284 SKRFG 288 (428)
T ss_pred HHHcc
Confidence 99987
No 89
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.11 E-value=0.00019 Score=58.98 Aligned_cols=104 Identities=21% Similarity=0.269 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCC
Q 017012 71 LILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTAN 150 (379)
Q Consensus 71 ~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (379)
...+++..++.+++.| |++||+.+.......++..+.+... . +
T Consensus 8 ~~~~~~~~~~~g~~~d--~~g~~~~~~~~~~~~~~~~~~~~~~---~--------------------~------------ 50 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTD--RFGRKPVLLVGLFIFVLSTAMFALS---S--------------------N------------ 50 (141)
T ss_pred hhHHHHHHhhHHHHHh--hcchhHHHHHHHHHHHHHHHHHHHh---c--------------------c------------
Confidence 3457788999999999 9999998876655544443333221 1 0
Q ss_pred CCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 151 SADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 151 ~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.| ... +..+.............+.++.|.++.++..+.+++...+.++|..+|+.+++.+.
T Consensus 51 --~~-----~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (141)
T TIGR00880 51 --IT-----VLI----IARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLA 111 (141)
T ss_pred --HH-----HHH----HHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHh
Confidence 22 111 22222333334455688899999999999999999999999999999999988876
No 90
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.08 E-value=0.00019 Score=71.41 Aligned_cols=136 Identities=15% Similarity=0.032 Sum_probs=83.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCch
Q 017012 61 SKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPK 140 (379)
Q Consensus 61 e~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (379)
+....+.......+++..++.++++| |++|++.+.......++.++++.. . + +
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~g~l~d--r~g~~~~~~~~~~~~~~~~~~~~~----~-~------------------~-- 307 (406)
T PRK11551 255 SQAGLVQIAFNIGGALGSLLIGALMD--RLRPRRVVLLIYAGILASLAALAA----A-P------------------S-- 307 (406)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHHh----c-C------------------c--
Confidence 34444454555678888999999999 999999876643333222222211 1 0 0
Q ss_pred hhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHH
Q 017012 141 AAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAG 220 (379)
Q Consensus 141 ~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~ 220 (379)
.|. .+ ++.+.............+.++.|.++.+++.+..|+....+.+|..+||.+++.
T Consensus 308 ------------~~~----~~-----~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~ 366 (406)
T PRK11551 308 ------------FAG----ML-----LAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQ 366 (406)
T ss_pred ------------HHH----HH-----HHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhh
Confidence 121 11 111112222233455788999999999999999999999999999999999998
Q ss_pred HHHH-hH--HHHHHHHHHHHHHHHHHH
Q 017012 221 MAFL-GP--YLLLFAACLMELAAQSSK 244 (379)
Q Consensus 221 la~~-g~--~lll~aa~ll~l~~~~~~ 244 (379)
+... +. ..+...+.+..++..+.+
T Consensus 367 l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 367 LLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred hhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 8632 32 233333334444444433
No 91
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.08 E-value=0.0033 Score=65.81 Aligned_cols=171 Identities=12% Similarity=0.087 Sum_probs=99.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhhccchhhcc-cCccc--hhHHHHHHHHHHHHHHHHHHHhhcCCCC-CchhHHHHHH
Q 017012 25 HETSALLHSSSCFFFILSAYFVVLPLRDEGAIS-LGLSK--LPGLFVGSLILTLIAAPVSTLIFSLPNL-SKAKALVLIH 100 (379)
Q Consensus 25 ~E~~~~l~~~l~~F~il~~y~ilrpird~l~vs-~Gae~--lp~l~~~~~~~~ll~~~iy~~L~~~~r~-~r~rv~~~~~ 100 (379)
+.-+.+..++...++--++||..+..-.....+ .|.+. --.+......+..+..++.|+++| |+ ||||.+.+..
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaD--RilGrrr~iliG~ 83 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLAD--KVLGNRMAVMLGA 83 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HccCcHHHHHHHH
Confidence 344556666767777778888777665555444 34332 222333434566777889999999 99 9999876555
Q ss_pred HHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHH
Q 017012 101 RFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITI 180 (379)
Q Consensus 101 ~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~ 180 (379)
....+..++.+. ... . .+ +.+.+ ..+.... +....
T Consensus 84 il~~lg~lll~~----~~~------------------~--------------~~----~~~l~--l~li~iG---~G~~~ 118 (493)
T PRK15462 84 LLMAIGHVVLGA----SEI------------------H--------------PS----FLYLS--LAIIVCG---YGLFK 118 (493)
T ss_pred HHHHHHHHHHHH----hhc------------------c--------------hh----HHHHH--HHHHHHh---ccccc
Confidence 444333332221 100 0 01 01211 0110001 11112
Q ss_pred HHHHHHHHhhcCccchhH--HHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHH
Q 017012 181 SSTWARVIDVMDSESGSR--LFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQS 242 (379)
Q Consensus 181 slfW~~~~di~~~~eakR--~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa~ll~l~~~~ 242 (379)
...-++++|.+++++.+| -|++...++++|+.+||.+++++. ..|. ..+.++++.+.+++..
T Consensus 119 ~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 119 SNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred ccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHH
Confidence 233467999999876555 699999999999999999999987 5564 3444444444444443
No 92
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.08 E-value=0.0023 Score=65.13 Aligned_cols=67 Identities=19% Similarity=0.220 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCC-chhHHHHHH
Q 017012 32 HSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLS-KAKALVLIH 100 (379)
Q Consensus 32 ~~~l~~F~il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~-r~rv~~~~~ 100 (379)
.+..++|+-.+.+...-|.-....-+.| .+++..+.....+..++..|+.|.++| |.. ++|++.+..
T Consensus 6 rLs~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aD--r~~~~~~~l~~~~ 75 (400)
T PF03825_consen 6 RLSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIAD--RFGSAKRILALLS 75 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--HhhhHHHHHHHHH
Confidence 4455556666666666666544333344 567777776777888999999999999 975 566665543
No 93
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.06 E-value=0.00035 Score=76.48 Aligned_cols=115 Identities=9% Similarity=-0.002 Sum_probs=81.4
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCc
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDP 139 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (379)
.+...++..+.++.+++..++.|+++| |+|||+++.+....+++..++.++.- +
T Consensus 201 ~~~~g~l~s~~~lG~iiG~li~G~LsD--R~GRR~~lii~lil~~i~~ll~afa~--s---------------------- 254 (742)
T TIGR01299 201 DSGKGMLGLIVYLGMMVGAFFWGGLAD--KLGRKQCLLICLSVNGFFAFFSSFVQ--G---------------------- 254 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCcHHHHHHHHHHHHHHHHHHHHHh--h----------------------
Confidence 344556656667888999999999999 99999998887666554444433211 1
Q ss_pred hhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHH
Q 017012 140 KAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAA 219 (379)
Q Consensus 140 ~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~ 219 (379)
.| .+. +.|. ...+...........+++|.++.+++.+.++++.++..+|.++++.++.
T Consensus 255 -------------~~-----~ll-v~R~---l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~ 312 (742)
T TIGR01299 255 -------------YG-----FFL-FCRL---LSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAW 312 (742)
T ss_pred -------------HH-----HHH-HHHH---HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12 111 1122 2333333445688999999999999999999999999999999998876
Q ss_pred HHH
Q 017012 220 GMA 222 (379)
Q Consensus 220 ~la 222 (379)
.+.
T Consensus 313 ~il 315 (742)
T TIGR01299 313 AII 315 (742)
T ss_pred HHH
Confidence 654
No 94
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.01 E-value=0.00027 Score=72.45 Aligned_cols=122 Identities=15% Similarity=0.089 Sum_probs=76.5
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCC
Q 017012 59 GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKED 138 (379)
Q Consensus 59 Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (379)
+.+...++.......+++..++.++++| |++|++++........+..+++ .... . +
T Consensus 309 ~~~~~g~~~~~~~~~~~~g~~~~g~l~d--r~g~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~ 364 (496)
T PRK03893 309 DPHTVANVLFFSGFGAAVGCCVGGFLGD--WLGTRKAYVCSLLISQLLIIPV---FAIG-G------------------A 364 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcchHHHHHHHHHHHHHHHHH---hhcc-c------------------c
Confidence 3445566666666778889999999999 9999998665432222111111 1000 0 0
Q ss_pred chhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHH
Q 017012 139 PKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFA 218 (379)
Q Consensus 139 ~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~ 218 (379)
. .| ... ...+++ .........++..++.|.++.+++.+.+|+....+++|..+||.++
T Consensus 365 ------~-------~~-----~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~ 422 (496)
T PRK03893 365 ------N-------VW-----VLG---LLLFFQ-QMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILG 422 (496)
T ss_pred ------H-------HH-----HHH---HHHHHH-HHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHH
Confidence 0 11 111 011211 1111222335667889999999999999999999999999999999
Q ss_pred HHHH-HHhH
Q 017012 219 AGMA-FLGP 226 (379)
Q Consensus 219 ~~la-~~g~ 226 (379)
+.+. ..|.
T Consensus 423 g~l~~~~g~ 431 (496)
T PRK03893 423 ALIAQRLDL 431 (496)
T ss_pred HHHhccCCh
Confidence 9887 5554
No 95
>PRK09848 glucuronide transporter; Provisional
Probab=98.01 E-value=0.00093 Score=68.03 Aligned_cols=77 Identities=5% Similarity=-0.046 Sum_probs=41.5
Q ss_pred chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 017012 297 AILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLL 376 (379)
Q Consensus 297 ~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrl 376 (379)
+..+.++.++++|.+...++..+++............-+.++.+.++++ .+.+....+.+..++.....+++.+|+
T Consensus 216 ~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~l~~~l~~r~ 291 (448)
T PRK09848 216 SLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGL----FTVLVLVQNLVGTVASAPLVPGMVARI 291 (448)
T ss_pred CHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHH----HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5677889999999998776665555443322221111122222333332 333333343444444445567888888
Q ss_pred C
Q 017012 377 G 377 (379)
Q Consensus 377 G 377 (379)
|
T Consensus 292 g 292 (448)
T PRK09848 292 G 292 (448)
T ss_pred C
Confidence 7
No 96
>PRK10489 enterobactin exporter EntS; Provisional
Probab=97.98 E-value=0.0014 Score=65.89 Aligned_cols=135 Identities=13% Similarity=0.062 Sum_probs=82.5
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCc
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDP 139 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (379)
.+...++........++..++.+++.| |.++++.+.......++.++++++ . + +
T Consensus 258 ~~~~g~~~~~~~~g~~ig~~~~~~l~~--~~~~~~~l~~~~~~~~~~~~~~~~----~-~------------------~- 311 (417)
T PRK10489 258 AAQIGLLYAAVPLGAALGALTSGWLAH--SARPGLLMLLSTLGSFLAVGLFGL----M-P------------------M- 311 (417)
T ss_pred hhHhHHHHHHHHHHHHHHHHHHHHhhh--ccCcchHHHHHHHHHHHHHHHHHc----c-c------------------h-
Confidence 334445555556677788888899998 877776665544433333322221 1 0 0
Q ss_pred hhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHH
Q 017012 140 KAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAA 219 (379)
Q Consensus 140 ~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~ 219 (379)
.|. ..+ .+.+ ............++++.|..+.+.+.|.+|+.+...++|..+|+.+.+
T Consensus 312 -------------~~~----~~~----~~~~-~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G 369 (417)
T PRK10489 312 -------------WIL----AVL----CLAL-FGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLG 369 (417)
T ss_pred -------------HHH----HHH----HHHH-HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHH
Confidence 111 111 1111 222233344567889999999999999999999999999999999999
Q ss_pred HHH-HHhH-H-HHHHHHHHHHHHHHH
Q 017012 220 GMA-FLGP-Y-LLLFAACLMELAAQS 242 (379)
Q Consensus 220 ~la-~~g~-~-lll~aa~ll~l~~~~ 242 (379)
.+. ..|. . .+..+++.+.+++..
T Consensus 370 ~l~~~~g~~~~~~~~~~~~~~~~~~~ 395 (417)
T PRK10489 370 GLGAMMTPVASASASGFGLLIIGVLL 395 (417)
T ss_pred HHHHHhchhhHHHHHHHHHHHHHHHH
Confidence 987 5564 3 333344444444444
No 97
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.94 E-value=0.011 Score=61.73 Aligned_cols=265 Identities=13% Similarity=0.043 Sum_probs=147.5
Q ss_pred HHHHHHHHhhhccchhhcc-------cC--ccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHH
Q 017012 39 FILSAYFVVLPLRDEGAIS-------LG--LSK-LPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLL 108 (379)
Q Consensus 39 ~il~~y~ilrpird~l~vs-------~G--ae~-lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~l 108 (379)
+++|-|..++.+|..+-+. .| .++ .-.++.+-+..=.+...+.|+++| |++-||++.+......+.-+
T Consensus 30 ~~lC~fGF~~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaD--rlG~K~vL~l~~l~Wsl~t~ 107 (511)
T TIGR00806 30 LYLCFYGFMAQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTD--YLRYKPVLVLQALSFVCVWL 107 (511)
T ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHH--HhCchHHHHHHHHHHHHHHH
Confidence 4556667777777766444 12 223 333333333344566677799999 99999998887766655555
Q ss_pred HHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 017012 109 VFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVI 188 (379)
Q Consensus 109 lfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~ 188 (379)
+.++.-. .+. +. +.|++|=+.+ .... ....++.
T Consensus 108 L~~fa~S-------------------------------------l~~----L~--i~R~llGvaE---A~~~-A~~syI~ 140 (511)
T TIGR00806 108 LLLLGTS-------------------------------------VWH----MQ--LMEVFYSVTM---AARI-AYSSYIF 140 (511)
T ss_pred HHHHHHH-------------------------------------HHH----HH--HHHHHHHHHH---HHHH-HHHHHHH
Confidence 5544211 110 11 2256543333 3333 7778899
Q ss_pred hhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCC
Q 017012 189 DVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFLGP----YLLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKAD 264 (379)
Q Consensus 189 di~~~~eakR~fgligag~~lG~I~G~~l~~~la~~g~----~lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~ 264 (379)
..++.+|+.|..|+..+|..+|.++|+.+++.+..+|- .|..++.....++.++.+.|-+...+.-.+.++ +..+
T Consensus 141 ~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~-~~~~ 219 (511)
T TIGR00806 141 SLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLE-DVRG 219 (511)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhcccc-cccc
Confidence 99999999999999999999999999999988665552 255566666666666666653211100000000 0000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCcccccCcc----cchHHHHHHHHhchhHHHH----HHHHHHHHHHHHHHHHHHHHHH
Q 017012 265 SDPRSGADGQTAPAAKVPSPRSSTSIVKPHL----WAILDGLRLIFSSNYLLSV----SLFLWLSAVVSSFFYFQKVTVI 336 (379)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~~i~~S~yL~~i----~~~v~l~~~~~~lv~~~~~~~v 336 (379)
.... + .+...|..+ ++.. +..|..+ .-++.-++...++|.++.. ++-.+.|.-+.|.+...|+.+-
T Consensus 220 ~~~~-~-~~~~~~~~~---~~~~-~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~ 293 (511)
T TIGR00806 220 ALPC-E-LDQMVPGPG---GKLE-DYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLD 293 (511)
T ss_pred cccc-c-cccCCCCCc---cccc-hhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcC
Confidence 0000 0 000000000 0000 0001111 1356667778888888443 4455667778888888887661
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHHHHHHHH
Q 017012 337 AMTVSSSLGRRRLLAEINSFIAVFILAGQL 366 (379)
Q Consensus 337 ~~~~~~~~~~taf~G~~~~~~gv~~l~~ql 366 (379)
++++. +-|..+.+...+..+..+
T Consensus 294 ----~~~~~---yNG~veA~~tllga~~a~ 316 (511)
T TIGR00806 294 ----ESLNK---YNGAVDAASTLLGAITSF 316 (511)
T ss_pred ----CCccc---cCCHHHHHHHHHHHHHHH
Confidence 22222 447777666666555544
No 98
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.94 E-value=0.0011 Score=67.52 Aligned_cols=125 Identities=13% Similarity=0.007 Sum_probs=81.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchh
Q 017012 62 KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKA 141 (379)
Q Consensus 62 ~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (379)
...++.....+..++..++.|+++| |++|||++.+....+.+..++.++....... ..++ +
T Consensus 56 ~~~~~~s~~~ig~~~~~~~~G~l~d--r~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~----------~~~~----~--- 116 (479)
T PRK10077 56 LLGFCVASALIGCIIGGALGGYCSN--RFGRRDSLKIAAVLFFISALGSAWPEFGFTS----------IGPD----N--- 116 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HhccHHHHHHHHHHHHHHHHHHHhhcccccc----------cccc----c---
Confidence 4455555667888999999999999 9999999988877776655544432110000 0000 0
Q ss_pred hhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 142 AVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 142 ~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~l 221 (379)
++ .+ |.+. +.|++ ..+.........-++++|.++.+|+.+..++.+.+..+|.++++.++..+
T Consensus 117 ------~~---~~----~~l~-~~R~l---~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~ 179 (479)
T PRK10077 117 ------TG---YV----PEFV-IYRII---GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFI 179 (479)
T ss_pred ------hh---HH----HHHH-HHHHH---HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 01 0111 22332 23333444556777899999999999999999999999999988776655
Q ss_pred H
Q 017012 222 A 222 (379)
Q Consensus 222 a 222 (379)
.
T Consensus 180 ~ 180 (479)
T PRK10077 180 A 180 (479)
T ss_pred h
Confidence 3
No 99
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=97.93 E-value=0.0013 Score=65.30 Aligned_cols=129 Identities=12% Similarity=0.022 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCC
Q 017012 69 GSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGST 148 (379)
Q Consensus 69 ~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (379)
......++..++.+++.| |++++|.+.......++.++++++ . + +
T Consensus 257 ~~~~~~~~~~~~~g~l~~--r~~~~~~~~~~~~~~~~~~~~~~~----~-~------------------~---------- 301 (399)
T PRK05122 257 LFGVAFVGARLLFGNLIN--RLGGLRVAIVSLLVEILGLLLLWL----A-P------------------S---------- 301 (399)
T ss_pred HHHHHHHHHHHHHHHHHH--HhccHHHHHHHHHHHHHHHHHHHH----h-c------------------c----------
Confidence 334455667788999999 999999876665554444433322 1 0 0
Q ss_pred CCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-
Q 017012 149 ANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP- 226 (379)
Q Consensus 149 ~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~- 226 (379)
.| ... +..+.............-..+.|.++.++..|.+|+.+...++|..+|+.+.+.+. ..|.
T Consensus 302 ----~~-----~~~----~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 368 (399)
T PRK05122 302 ----PW-----MAL----IGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYP 368 (399)
T ss_pred ----HH-----HHH----HHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 12 111 11111111111222233456778888999999999999999999999888888876 4564
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 017012 227 YLLLFAACLMELAAQSSKG 245 (379)
Q Consensus 227 ~lll~aa~ll~l~~~~~~~ 245 (379)
..+.+.+++..++..+...
T Consensus 369 ~~~~~~~~~~~~~~~~~~~ 387 (399)
T PRK05122 369 SIFLAAALAALLGLALTWL 387 (399)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444444445444333
No 100
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.91 E-value=0.00026 Score=68.40 Aligned_cols=127 Identities=17% Similarity=0.226 Sum_probs=79.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhh
Q 017012 63 LPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAA 142 (379)
Q Consensus 63 lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (379)
...+........++..++.++++| |++||+.+.+.....++..+++.+.. . . +
T Consensus 242 ~~~~~~~~~~~~~~~~~~~g~l~d--r~g~~~~~~~~~~~~~~~~~~~~~~~--~-~------------------~---- 294 (377)
T TIGR00890 242 LVLAVSISSIFNGGGRPFLGALSD--KIGRQKTMSIVFGISAVGMAAMLFIP--M-L------------------N---- 294 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHhhhhhhhHHHHHHHHHHHHHHHcc--c-c------------------h----
Confidence 334444445677788899999999 99999987665555444333322210 0 0 0
Q ss_pred hccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 143 VDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 143 ~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.+ .+. ..............+.+...++|.++.+++.+.+|+.+...++|..+||.+.+.+.
T Consensus 295 ----------~~-----~~~----~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 355 (377)
T TIGR00890 295 ----------DV-----LFL----ATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHAL 355 (377)
T ss_pred ----------hH-----HHH----HHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 111 00011111122233466788999999999999999999999999999999998876
Q ss_pred -HHhH-HHHHHHHHH
Q 017012 223 -FLGP-YLLLFAACL 235 (379)
Q Consensus 223 -~~g~-~lll~aa~l 235 (379)
+.|. ..+.+.+++
T Consensus 356 ~~~g~~~~f~~~~~~ 370 (377)
T TIGR00890 356 TEIGFEYTFIVTGAF 370 (377)
T ss_pred hhhchhhHHHHHHHH
Confidence 5564 344433433
No 101
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.90 E-value=0.00026 Score=68.91 Aligned_cols=152 Identities=13% Similarity=0.147 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhcc-cC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs-~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~ 106 (379)
++......++....++...+.-...... .| .+...++........++..++.++++| |++||+.+........+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d--r~g~~~~~~~~~~~~~~~ 298 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSD--RIGRRPVLIIFTVLAALL 298 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHH--HhchHHHHHHHHHHHHHH
Confidence 5555555566555555554443333322 23 333444444555678888899999999 999999776443332221
Q ss_pred HHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 017012 107 LLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWAR 186 (379)
Q Consensus 107 ~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~ 186 (379)
.+.+.... .. . + . .| ... ...+.............++.
T Consensus 299 ~~~~~~~~-~~-~------------------~------~-------~~-----~~~----~~~~~~g~~~~~~~~~~~~~ 336 (394)
T TIGR00883 299 AVPLLMAL-LD-S------------------G------S-------FT-----LFF----FLVLGLALIGGMYTGPMGSF 336 (394)
T ss_pred HHHHHHHH-hc-C------------------C------c-------hH-----HHH----HHHHHHHHHHHHHhhhHHHH
Confidence 11111111 01 0 0 0 12 111 22222333333455578899
Q ss_pred HHhhcCccchhHHHHHH-HHHHHHHHHHhHHHHHHHH-HHh
Q 017012 187 VIDVMDSESGSRLFGFI-GAGATLGQLFGSLFAAGMA-FLG 225 (379)
Q Consensus 187 ~~di~~~~eakR~fgli-gag~~lG~I~G~~l~~~la-~~g 225 (379)
++|.++.+++.+.+|+. +.+..+|..+||.+++.+. +.|
T Consensus 337 ~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 337 LPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 99999999999999985 5666788889999998886 455
No 102
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.88 E-value=0.00019 Score=74.45 Aligned_cols=125 Identities=20% Similarity=0.220 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCC
Q 017012 71 LILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTAN 150 (379)
Q Consensus 71 ~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (379)
...+++.+|..|.++| |++|+..+.+.+.+..+.-+...+.
T Consensus 72 ~~~~~i~s~~iG~lSD--~~grk~~L~~~~~~~~l~~~~~~~~------------------------------------- 112 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSD--RYGRKVVLLLPLFGTILPALCLLFQ------------------------------------- 112 (463)
T ss_pred HHHHHHHHhhhHHhhh--hhhhhhhHHHHHHHHHHhHHHHHHH-------------------------------------
Confidence 4578899999999999 9999999988776654333222221
Q ss_pred CCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH-hH-HH
Q 017012 151 SADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFL-GP-YL 228 (379)
Q Consensus 151 ~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~~-g~-~l 228 (379)
.| |.++ +.++ .+.-....+.--++++|+++.|++-..||++.+-..+|..+||.+++.+.+. |- ..
T Consensus 113 --~~----~~~~----~~~l--~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~ 180 (463)
T KOG2816|consen 113 --GY----WFFL----LLGL--SGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALV 180 (463)
T ss_pred --HH----HHhh----hccc--ccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHH
Confidence 11 2211 1110 0111234456668899999999999999999999999999999999888744 43 35
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 017012 229 LLFAACLMELAAQSSKGI 246 (379)
Q Consensus 229 ll~aa~ll~l~~~~~~~l 246 (379)
+.++++..+++....+..
T Consensus 181 f~ia~~~~~~~~~y~~~~ 198 (463)
T KOG2816|consen 181 FLIAAASGILSLLYMLLF 198 (463)
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 666666666666654443
No 103
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.88 E-value=6e-05 Score=77.29 Aligned_cols=228 Identities=12% Similarity=0.099 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCC
Q 017012 71 LILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTAN 150 (379)
Q Consensus 71 ~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (379)
.+...++.|++|.|.| |++|++++..-..+..+.-++-++.-+
T Consensus 78 ~v~~~i~sPl~gyLad--ryNR~~v~~vG~~iW~~Av~~~~fs~~----------------------------------- 120 (493)
T KOG1330|consen 78 IVVFMIASPLFGYLAD--RYNRKRVIAVGIFIWTLAVFASGFSNH----------------------------------- 120 (493)
T ss_pred HHHHHHHHHHHHHHHh--hcCcceEEeeHHHHHHHHHHHHHHHHH-----------------------------------
Confidence 4568899999999999 999999876665555433333333211
Q ss_pred CCccccccchhhhhhHHHHHHHHHHHHH-HHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH-hHH-
Q 017012 151 SADWGDHGWFYVSVRMGFFLWVALLNLI-TISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFL-GPY- 227 (379)
Q Consensus 151 ~~~w~~~~w~~~~~~~~Fyvw~~v~~~~-~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~~-g~~- 227 (379)
-| .+. +-|.| -+.+.. ...+.-++++|.|+.+++.|.|+++..+..+|.++|...++..+.. +.|
T Consensus 121 --Fw-----q~~-l~R~~----vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr 188 (493)
T KOG1330|consen 121 --FW-----QVL-LCRGF----VGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWR 188 (493)
T ss_pred --HH-----HHH-HHHHH----hccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceE
Confidence 12 222 22332 222222 3448889999999999999999999999999999998887777633 223
Q ss_pred -HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHH
Q 017012 228 -LLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIF 306 (379)
Q Consensus 228 -lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~ 306 (379)
-+.+++++..+.+++.+...+..++. . .+ +.+ + +.+..++ ..+.++-++...
T Consensus 189 ~af~~~avl~vi~~~L~~~f~~eP~rg---------a---~~----~~~-----~-----~~~~~~~-~ts~~kDl~~l~ 241 (493)
T KOG1330|consen 189 WAFRGSAVLGVIVGLLVFLFVREPERG---------A---RD----EVD-----G-----ENKMVKP-FTSVWKDLKVLA 241 (493)
T ss_pred EEEEeehHHHHHHHHHHHhhccCcccc---------c---cc----ccc-----c-----CCcCCCC-ccchHHHHHHHH
Confidence 45555666655555554443433321 0 00 000 0 0000112 235666677776
Q ss_pred hchhH-HHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 017012 307 SSNYL-LSVSLFLWLSAVVSSFFYFQKVTV--IAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFL 374 (379)
Q Consensus 307 ~S~yL-~~i~~~v~l~~~~~~lv~~~~~~~--v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llr 374 (379)
+.|-. ....-+.....++.++-+..-+.. ..+.-....+.+..||.+....|++-.++-..++-++.+
T Consensus 242 ~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~ 312 (493)
T KOG1330|consen 242 KIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSR 312 (493)
T ss_pred ccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHH
Confidence 63332 222222222222222111111100 011111345567888888888888887776666555443
No 104
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=97.84 E-value=0.00067 Score=64.61 Aligned_cols=166 Identities=18% Similarity=0.154 Sum_probs=105.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccchhhccc-C--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchh-HHHHHHHHH
Q 017012 28 SALLHSSSCFFFILSAYFVVLPLRDEGAISL-G--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAK-ALVLIHRFF 103 (379)
Q Consensus 28 ~~~l~~~l~~F~il~~y~ilrpird~l~vs~-G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~r-v~~~~~~~f 103 (379)
++++...+..++....+......-.....+. | .++..+..........+..++.+++.| |++||+ .+.......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~ 252 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSD--RLGRRRLLLLIGLLLA 252 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhhHHHHHHHHHH
Confidence 4555555555666666655555554444441 2 333444555567788899999999999 999998 766555444
Q ss_pred HHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHH
Q 017012 104 SVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISST 183 (379)
Q Consensus 104 ~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slf 183 (379)
.+..+.+...- + .| ... +.++..+..........
T Consensus 253 ~i~~~~~~~~~-----------------------~--------------~~-----~~~----~~~~~~g~~~~~~~~~~ 286 (352)
T cd06174 253 ALGLLLLALAP-----------------------S--------------LA-----LLL----VALLLLGFGLGFAFPAL 286 (352)
T ss_pred HHHHHHHHHhc-----------------------c--------------HH-----HHH----HHHHHHHHHHhccchhH
Confidence 44433333210 0 12 111 22333344445556788
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHH
Q 017012 184 WARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQ 241 (379)
Q Consensus 184 W~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa~ll~l~~~ 241 (379)
+.+++|..+.+++.+.+|+.+...++|..+|+.+.+.+. ..+. ..+.+.+++..++..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i 346 (352)
T cd06174 287 LTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAAL 346 (352)
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999886 4454 344444444333333
No 105
>TIGR00893 2A0114 d-galactonate transporter.
Probab=97.76 E-value=0.00094 Score=64.53 Aligned_cols=154 Identities=14% Similarity=0.098 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhcc-cC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchh--HHHHHHHHH
Q 017012 29 ALLHSSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAK--ALVLIHRFF 103 (379)
Q Consensus 29 ~~l~~~l~~F~il~~y~ilrpird~l~vs-~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~r--v~~~~~~~f 103 (379)
+++...+..++....+....+.-.....+ .| .+...++........++..++.++++| |++||+ +..... ..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~-~~ 292 (399)
T TIGR00893 216 RVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSD--LLLRRGKSLVFARK-TA 292 (399)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHH--HHhhcccchhHHHH-HH
Confidence 44555555555555555444433333322 23 333444555556678889999999999 999986 221111 11
Q ss_pred HHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHH
Q 017012 104 SVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISST 183 (379)
Q Consensus 104 ~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slf 183 (379)
.+..++.......... + + . .| ... .. .....+........
T Consensus 293 ~~~~~~~~~~~~~~~~------------~-----~------~-------~~-----~~~----~~-~~~~~~~~~~~~~~ 332 (399)
T TIGR00893 293 IIAGLVLSLLMFATNY------------V-----N------I-------PY-----AAL----AL-VALGFFGLGAGAIG 332 (399)
T ss_pred HHHHHHHHHHHHHhcc------------c-----h------h-------HH-----HHH----HH-HHHHHhchhhhhHH
Confidence 1111222221111100 0 0 0 12 111 11 11222222245688
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHh
Q 017012 184 WARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 225 (379)
Q Consensus 184 W~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g 225 (379)
|.+++|.++.+++.+.+|+.+...++|..+||.+.+.+. ..|
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g 375 (399)
T TIGR00893 333 WALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTG 375 (399)
T ss_pred HHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCC
Confidence 999999999999999999999999999999999999886 445
No 106
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.75 E-value=0.0064 Score=63.10 Aligned_cols=253 Identities=15% Similarity=0.133 Sum_probs=130.7
Q ss_pred HHhhhccchhhcccCccchhHHHHHHHHHHHHHHHHHHHhhc--CCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccch
Q 017012 45 FVVLPLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFS--LPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYL 122 (379)
Q Consensus 45 ~ilrpird~l~vs~Gae~lp~l~~~~~~~~ll~~~iy~~L~~--~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~ 122 (379)
|++.=.-|..+++.+ ..--++...=+.-.+--|+.|.++| ..|+||+|-+.+.. ++.+.+++.+....++
T Consensus 34 yLl~fYTdv~Gis~~--~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g---~ip~~i~~~l~F~~p~--- 105 (467)
T COG2211 34 YLLFFYTDVFGLSAA--LAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWG---AIPFAIVAVLLFITPD--- 105 (467)
T ss_pred HHHHHHhcccCCcHH--HHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHH---hHHHHHHHHHHHcCCC---
Confidence 333334455555511 1122333334456677899999998 44788877553322 2233444443332210
Q ss_pred hhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc-CccchhHHHH
Q 017012 123 SKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVM-DSESGSRLFG 201 (379)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~-~~~eakR~fg 201 (379)
.+ ..++|.|+ .+-|+..++.-..+..=+|+..+.+| +++|+.|+.+
T Consensus 106 ----------~~--------------------~~~k~~ya---~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s 152 (467)
T COG2211 106 ----------FS--------------------MTGKLIYA---LVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTS 152 (467)
T ss_pred ----------cc--------------------cCcchHHH---HHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHH
Confidence 00 01223444 23444444443444556888888887 4789999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHH-HHh--H-H--HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q 017012 202 FIGAGATLGQLFGSLFAAGMA-FLG--P-Y--LLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQT 275 (379)
Q Consensus 202 ligag~~lG~I~G~~l~~~la-~~g--~-~--lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 275 (379)
.=..++++|..+-..+...+. .+| . . ....+.++..++.+.....++....+. .+. +..
T Consensus 153 ~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~--------~~~--~~~----- 217 (467)
T COG2211 153 WRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERV--------VET--QPT----- 217 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhccc--------Ccc--ccC-----
Confidence 999999999888776666665 333 1 1 222222222222222222222211110 000 000
Q ss_pred CCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHhcCChHHHHHHH
Q 017012 276 APAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSF-----FYFQKVTVIAMTVSSSLGRRRLL 350 (379)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~l-----v~~~~~~~v~~~~~~~~~~taf~ 350 (379)
+ ...+....+.+..++++|-++.+++..+++....++ +||.. .-..++ | .+
T Consensus 218 ----~-----------~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~-----y~lg~~-~---l~ 273 (467)
T COG2211 218 ----K-----------TGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVT-----YVLGDP-E---LF 273 (467)
T ss_pred ----c-----------ccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEE-----EEcCCh-H---HH
Confidence 0 001224677788899999998888866655543332 44431 111332 2 22
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 351 AEINSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 351 G~~~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
......+..+..+....+..++.+|+|
T Consensus 274 ~~~~~~~~~~~~l~~~~~~p~L~~~~g 300 (467)
T COG2211 274 AYLLLLASGAGLLIGLILWPRLVKKFG 300 (467)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence 334444555555665667789999887
No 107
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.70 E-value=0.0029 Score=62.72 Aligned_cols=65 Identities=17% Similarity=0.259 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHH
Q 017012 179 TISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQSS 243 (379)
Q Consensus 179 ~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa~ll~l~~~~~ 243 (379)
........+.|..+.++..|.+++.+...++|..+||.+++.+. ..|. ..+.+.+++.+++.+..
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 328 LLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred hHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Confidence 34455566778888888999999999999999999999999887 4564 34444454444454443
No 108
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.69 E-value=0.00091 Score=66.63 Aligned_cols=123 Identities=12% Similarity=0.130 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccC
Q 017012 67 FVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQG 146 (379)
Q Consensus 67 ~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (379)
........++..++.++++| |++||+.+.+.....++.++++++...... ++++. . .
T Consensus 325 ~~~~~~~~~~~~~~~g~l~d--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~-~------~- 381 (481)
T TIGR00879 325 SIIVGAVNFAFTFVAIFLVD--RFGRRPLLLIGAAGMAICLFVLGILGASFV-------------TGSSK-S------S- 381 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHHHhhccc-------------CCccc-c------h-
Confidence 33445567788899999999 999999887765555555555543222110 00000 0 0
Q ss_pred CCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHh
Q 017012 147 STANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 225 (379)
Q Consensus 147 ~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g 225 (379)
.+ ... ....+....++.......+.+++|.++.+++.+..|+.+...++|.++||.+.+.+. +.+
T Consensus 382 ------~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~ 447 (481)
T TIGR00879 382 ------GN-----VAI---VFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIG 447 (481)
T ss_pred ------hH-----HHH---HHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 11 111 011122233344444577888999999999999999999999999999999888765 445
Q ss_pred H
Q 017012 226 P 226 (379)
Q Consensus 226 ~ 226 (379)
.
T Consensus 448 ~ 448 (481)
T TIGR00879 448 V 448 (481)
T ss_pred c
Confidence 3
No 109
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=97.69 E-value=0.004 Score=60.73 Aligned_cols=61 Identities=11% Similarity=0.064 Sum_probs=42.8
Q ss_pred HHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHH
Q 017012 181 SSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQS 242 (379)
Q Consensus 181 slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa~ll~l~~~~ 242 (379)
.....++.|.++. +..+.+++.....++|..+||.+.+.+. ..|. ..+.+.+++..++..+
T Consensus 307 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 369 (375)
T TIGR00899 307 GIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFC 369 (375)
T ss_pred HHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Confidence 4556778888865 4558999999999999999999999876 4454 3444444444444443
No 110
>TIGR00898 2A0119 cation transport protein.
Probab=97.68 E-value=0.003 Score=65.02 Aligned_cols=108 Identities=10% Similarity=0.123 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCC
Q 017012 71 LILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTAN 150 (379)
Q Consensus 71 ~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (379)
..+.+...++.++++| |++||+.+.+.....++.++++.+. +. +
T Consensus 365 ~~~~i~~~~~~~~l~d--r~grr~~~~~~~~~~~~~~l~~~~~--~~--------------------~------------ 408 (505)
T TIGR00898 365 GLVELPAKLITLLLID--RLGRRYTMAASLLLAGVALLLLLFV--PV--------------------D------------ 408 (505)
T ss_pred HHHHHHHHHHHHHHHH--HhCCHHHHHHHHHHHHHHHHHHHHc--CC--------------------C------------
Confidence 4456677778889999 9999998776655444433333221 11 0
Q ss_pred CCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHh
Q 017012 151 SADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFLG 225 (379)
Q Consensus 151 ~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~~g 225 (379)
..| ... ...+.............+.+++|+++++.+.+-.|+.++.+.+|+++||.+.+ +...+
T Consensus 409 -~~~-----~~~----~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~ 472 (505)
T TIGR00898 409 -LYF-----LRT----ALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKW 472 (505)
T ss_pred -chH-----HHH----HHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHH
Confidence 012 111 11111222233344577889999999999999999999999999999999988 55444
No 111
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.66 E-value=0.009 Score=59.79 Aligned_cols=227 Identities=16% Similarity=0.100 Sum_probs=135.8
Q ss_pred hHHHHHHHH-HHHHHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHH
Q 017012 28 SALLHSSSC-FFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFS 104 (379)
Q Consensus 28 ~~~l~~~l~-~F~il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~ 104 (379)
+++-.-++. +.+.+.+=++--|--..+--+.| -+++-.++.+.+..+.++.++.|.+.| |+||||.-..--..+
T Consensus 33 ~~Fqr~yl~vY~La~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD--~~Grk~~cl~~cily- 109 (354)
T PF05631_consen 33 RRFQRKYLLVYLLAMAADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLAD--RYGRKKACLLFCILY- 109 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCchHHHHHHHHHH-
Confidence 344444443 56667777777777777776644 557888999999999999999999999 999998643311111
Q ss_pred HHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHH--H
Q 017012 105 VSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITIS--S 182 (379)
Q Consensus 105 ~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~s--l 182 (379)
.+=. +..-. + | .+. +. ++|++ .++-+...-| .
T Consensus 110 ---~~sc-l~k~~-~------------------~--------------~~~----L~--~GRvl---gGiaTSLLfS~FE 143 (354)
T PF05631_consen 110 ---SLSC-LTKHS-S------------------N--------------YPV----LL--LGRVL---GGIATSLLFSAFE 143 (354)
T ss_pred ---HHHH-HHHhc-c------------------c--------------cHH----HH--HHHHH---HHHHHHHHHHHHH
Confidence 1111 11111 0 0 111 11 23553 2322222222 3
Q ss_pred HHHHHHhh---cCccchhHHHHHHH-HHHHHHHHHhHHHHHHHH-HH--hH-HHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 017012 183 TWARVIDV---MDSESGSRLFGFIG-AGATLGQLFGSLFAAGMA-FL--GP-YLLLFAACLMELAAQSSKGIYKEIPRRP 254 (379)
Q Consensus 183 fW~~~~di---~~~~eakR~fglig-ag~~lG~I~G~~l~~~la-~~--g~-~lll~aa~ll~l~~~~~~~l~~~~~~~~ 254 (379)
-|-..-.- ++.|--.+.|+... .+-++-+|..|.++..++ .. |+ .++.+|+.++.++..++. ..|.+++
T Consensus 144 sW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~--~~W~ENy- 220 (354)
T PF05631_consen 144 SWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLIL--KTWPENY- 220 (354)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHH--hcccccC-
Confidence 46555432 22222244566666 455566777788877776 33 44 488888777766666422 2232221
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 017012 255 EELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVT 334 (379)
Q Consensus 255 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~ 334 (379)
+ |.. ++++.+.+..++.+.|.++|-++.+.+.-.++..+.-+.-|.|.-
T Consensus 221 -----g-----------~~~---------------~~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtP 269 (354)
T PF05631_consen 221 -----G-----------DTS---------------SSSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTP 269 (354)
T ss_pred -----C-----------Ccc---------------cccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeec
Confidence 0 000 012333467889999999999999999999998888888888876
Q ss_pred HHH
Q 017012 335 VIA 337 (379)
Q Consensus 335 ~v~ 337 (379)
.++
T Consensus 270 aL~ 272 (354)
T PF05631_consen 270 ALD 272 (354)
T ss_pred eec
Confidence 666
No 112
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.64 E-value=0.0021 Score=64.37 Aligned_cols=46 Identities=20% Similarity=0.040 Sum_probs=40.9
Q ss_pred HHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHh
Q 017012 180 ISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 225 (379)
Q Consensus 180 ~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g 225 (379)
..+++.++.|.++.+.+.+..|++...+.+|+++||.+++.+. ..|
T Consensus 339 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 339 GGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG 385 (426)
T ss_pred hHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc
Confidence 3467888999999999999999999999999999999999987 455
No 113
>PRK15011 sugar efflux transporter B; Provisional
Probab=97.63 E-value=0.0085 Score=59.90 Aligned_cols=60 Identities=12% Similarity=0.082 Sum_probs=42.3
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHH
Q 017012 182 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQS 242 (379)
Q Consensus 182 lfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa~ll~l~~~~ 242 (379)
..+.+.+|.++ +++.+..++.+...++|..+||.+++.+. ..|. ..+.+.+++..+++..
T Consensus 325 ~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK15011 325 IGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFC 386 (393)
T ss_pred HHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 34566788886 56788999999999999999999999887 4454 3444444444444443
No 114
>TIGR00895 2A0115 benzoate transport.
Probab=97.62 E-value=0.0028 Score=61.83 Aligned_cols=46 Identities=15% Similarity=0.097 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 176 NLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 176 ~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~l 221 (379)
........++.++|.++.++..+.+|+....+.+|..+||.+++.+
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 352 VNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 3445567899999999999999999999999999999999998764
No 115
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=97.61 E-value=0.0049 Score=61.80 Aligned_cols=148 Identities=13% Similarity=0.056 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSL 107 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~ 107 (379)
.+.....+++...+|+..-..-.....+.| .+..-.+.....+.+++..++.+++.| |++|++...+.....++.+
T Consensus 207 ~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~--r~~~~~~~~~~~~l~~~~~ 284 (393)
T PRK09705 207 AWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMAR--HQDRRKLLMLALVLQLVGF 284 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHh--hccchHHHHHHHHHHHHHH
Confidence 333444445555555544433333333333 344444555556678888999999999 9999988766543333222
Q ss_pred HHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017012 108 LVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARV 187 (379)
Q Consensus 108 llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~ 187 (379)
+++. +.+. + . .+ . ...+. ..-........+..+
T Consensus 285 ~~~~--~~~~--------------------~------~-------~~-----~------~~~l~-g~g~g~~~~~~~~~~ 317 (393)
T PRK09705 285 CGFI--WLPL--------------------Q------L-------PV-----L------WAMVC-GLGLGGAFPLCLLLA 317 (393)
T ss_pred HHHH--Hccc--------------------h------H-------HH-----H------HHHHH-HHhccchHHHHHHHH
Confidence 2221 1110 0 0 01 0 00011 111111223455556
Q ss_pred HhhcC-ccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH
Q 017012 188 IDVMD-SESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 188 ~di~~-~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~ 226 (379)
.|..+ .+++.+.+|++...+.+|..+||.+.+++. ..|.
T Consensus 318 ~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~ 358 (393)
T PRK09705 318 LDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGN 358 (393)
T ss_pred HhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 67775 577889999999999999999999999987 5553
No 116
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.61 E-value=0.068 Score=55.44 Aligned_cols=115 Identities=9% Similarity=-0.101 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhc
Q 017012 65 GLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVD 144 (379)
Q Consensus 65 ~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (379)
++........++..++.|+++| |+|||+.+.+....+.+..++.++.. . .
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d--~~Grr~~~~~~~~~~~v~~~~~~~~~--~-~------------------------- 109 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLAD--KLGRKRVYGMELIIMIIATVASGLSP--G-S------------------------- 109 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--hhccHHHHHHHHHHHHHHHHHHHHcc--C-c-------------------------
Confidence 3344556678899999999999 99999998776655554444333311 0 0
Q ss_pred cCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 145 QGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 145 ~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~l 221 (379)
. .+. .-|.+. +.|.+ ..+...........+++|.++.+++.|..++...+..+|.++|+.++..+
T Consensus 110 ~-------~~~-~~~~~~-~~r~l---~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~ 174 (502)
T TIGR00887 110 S-------PKS-VMATLC-FWRFW---LGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIV 174 (502)
T ss_pred c-------cch-HHHHHH-HHHHH---HHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 001111 11332 23323334456779999999999999999999999999999999887654
No 117
>PRK12382 putative transporter; Provisional
Probab=97.60 E-value=0.0046 Score=61.40 Aligned_cols=124 Identities=13% Similarity=0.033 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCC
Q 017012 71 LILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTAN 150 (379)
Q Consensus 71 ~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (379)
....++..++.++++| |++++|.+.......++.++++.+ . + +
T Consensus 259 ~~~~~~~~~~~g~l~~--r~g~~~~~~~~~~~~~~~~~~~~~----~-~------------------~------------ 301 (392)
T PRK12382 259 GGAFVLMRVLFGWMPD--RFGGVKVAIVSLLVETVGLLLLWL----A-P------------------T------------ 301 (392)
T ss_pred HHHHHHHHHHHHHHHH--hcCCCeehHHHHHHHHHHHHHHHH----c-c------------------c------------
Confidence 3445677889999999 999999877655554444333222 1 0 0
Q ss_pred CCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HH
Q 017012 151 SADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YL 228 (379)
Q Consensus 151 ~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~-~l 228 (379)
.|. .+. ..+....-...........+.|.++++++.+.+|+.+.+.++|..+||.+.+.+. +.|. ..
T Consensus 302 --~~~----~~~-----~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~ 370 (392)
T PRK12382 302 --AWV----ALA-----GAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSV 370 (392)
T ss_pred --HHH----HHH-----HHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH
Confidence 121 111 1111111122233456667788899999999999999999999999999999887 5564 34
Q ss_pred HHHHHHHHHHHHHH
Q 017012 229 LLFAACLMELAAQS 242 (379)
Q Consensus 229 ll~aa~ll~l~~~~ 242 (379)
+.+.+++..++...
T Consensus 371 ~~~~~~~~~~~~~~ 384 (392)
T PRK12382 371 FLAGAISAVLGIIV 384 (392)
T ss_pred HHHHHHHHHHHHHH
Confidence 44444444444443
No 118
>PRK09528 lacY galactoside permease; Reviewed
Probab=97.60 E-value=0.0017 Score=65.46 Aligned_cols=118 Identities=14% Similarity=0.120 Sum_probs=74.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCch
Q 017012 61 SKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPK 140 (379)
Q Consensus 61 e~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (379)
+.+.++.........+..++.++++| |++||+.+.+....+.+.++++++ . . +
T Consensus 262 ~~~g~~~~~~~~~~~~~~~~~g~l~d--r~g~~~~~~~~~~l~~~~~~l~~~----~-~------------------~-- 314 (420)
T PRK09528 262 RVFGYLNSFQVFLEALIMFFAPFIIN--RIGAKNALLLAGTIMAVRIIGSGF----A-T------------------G-- 314 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HhCcchhhHHHHHHHHHHHHHHHh----c-c------------------c--
Confidence 44455555555667788999999999 999999876655444433333322 1 0 0
Q ss_pred hhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHH-HHHHHHHHHHHhHHHHH
Q 017012 141 AAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGF-IGAGATLGQLFGSLFAA 219 (379)
Q Consensus 141 ~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgl-igag~~lG~I~G~~l~~ 219 (379)
.| |.+. ..+...+...........+++|.++.+.+...++. .+.++++|.++|+.+.+
T Consensus 315 ------------~~----~~~~-----~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G 373 (420)
T PRK09528 315 ------------PL----EVSI-----LKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAG 373 (420)
T ss_pred ------------HH----HHHH-----HHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHH
Confidence 23 1111 11112222222334556889999998888777766 67889999999999999
Q ss_pred HHH-HHhH
Q 017012 220 GMA-FLGP 226 (379)
Q Consensus 220 ~la-~~g~ 226 (379)
.+. ..|.
T Consensus 374 ~l~~~~G~ 381 (420)
T PRK09528 374 NLYDSIGF 381 (420)
T ss_pred HHHHhhCc
Confidence 886 4564
No 119
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.58 E-value=0.004 Score=63.35 Aligned_cols=111 Identities=10% Similarity=0.085 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCC
Q 017012 69 GSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGST 148 (379)
Q Consensus 69 ~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (379)
......++..++.++++| |++||+++.......++..++++...... .
T Consensus 314 ~~~~~~~i~~~~~g~l~d--r~g~r~~~i~~~~~~~v~~~~l~~~~~~~---------------------------~--- 361 (479)
T PRK10077 314 IVGVINLTFTVLAIMTVD--KFGRKPLQIIGALGMAIGMFSLGTAFYTQ---------------------------A--- 361 (479)
T ss_pred HHHHHHHHHHHHHHHHHH--HhcChHHHHHhHHHHHHHHHHHHHHHhcC---------------------------c---
Confidence 334567788899999999 99999998777766666665555432111 0
Q ss_pred CCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 149 ANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 149 ~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.+. |...+ ..+| ...+........|..++|.++.+++.+..|+..+.+.+|.++|+.+...+.
T Consensus 362 ----~~~---~~~~~--~~~~--~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 362 ----PGI---VALLS--MLFY--VAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred ----ccH---HHHHH--HHHH--HHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 110 11110 1222 111222223478999999999999999999999999999999976665443
No 120
>PRK09952 shikimate transporter; Provisional
Probab=97.56 E-value=0.011 Score=60.13 Aligned_cols=47 Identities=11% Similarity=0.072 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHhhcCccchhHHHHHHH-HHHHHHHHHhHHHHHHHHH
Q 017012 177 LITISSTWARVIDVMDSESGSRLFGFIG-AGATLGQLFGSLFAAGMAF 223 (379)
Q Consensus 177 ~~~~slfW~~~~di~~~~eakR~fglig-ag~~lG~I~G~~l~~~la~ 223 (379)
.......|.+++|.++.+.+..-.|+.. .|..+|+.++|.+++.+..
T Consensus 358 ~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~ 405 (438)
T PRK09952 358 DMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVT 405 (438)
T ss_pred HHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445678999999999977666777744 4455888889999888763
No 121
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.54 E-value=0.011 Score=59.08 Aligned_cols=149 Identities=13% Similarity=0.094 Sum_probs=80.6
Q ss_pred ccchhHHHHH-HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCC
Q 017012 60 LSKLPGLFVG-SLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKED 138 (379)
Q Consensus 60 ae~lp~l~~~-~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (379)
.+...++... .....++..++.+++.| |++|+|.+.+.....++..+.+....... . +
T Consensus 244 ~~~~g~~~~~~~~~~~i~g~~~~g~l~~--r~g~~~~l~~~~~~~~l~~l~~~~~~~~~-~------------------~ 302 (402)
T PRK11902 244 AGEVGIVNKTLGLAATIVGALAGGTLMV--RLGLYRSLMLFGVLQAVSNLGYWVLAVTP-K------------------H 302 (402)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHHHHHhcC-C------------------c
Confidence 4445554432 23456777889999999 99999977554444333333332211100 0 0
Q ss_pred chhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHH
Q 017012 139 PKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFA 218 (379)
Q Consensus 139 ~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~ 218 (379)
.| ... +.......+..+........+..+.+.+..++-+++.++..++|.+.++.++
T Consensus 303 --------------~~-----~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 359 (402)
T PRK11902 303 --------------LW-----TMA----LAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSALASVGRVYVGPTS 359 (402)
T ss_pred --------------HH-----HHH----HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 12 111 1110011122223333444444444444445567888888888888777778
Q ss_pred HHHH-HHhH-HHHHHHHHHHHHHHHHHHHHhhhcCC
Q 017012 219 AGMA-FLGP-YLLLFAACLMELAAQSSKGIYKEIPR 252 (379)
Q Consensus 219 ~~la-~~g~-~lll~aa~ll~l~~~~~~~l~~~~~~ 252 (379)
+.+. .+|. ..+.+++++..+++.+.++..+++.+
T Consensus 360 G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 395 (402)
T PRK11902 360 GYLVEAYGWPGFYLMTVVIALPGLALLWLMRGTIGR 395 (402)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 8776 6675 45555565555666666666555543
No 122
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=97.51 E-value=0.01 Score=60.15 Aligned_cols=63 Identities=11% Similarity=-0.014 Sum_probs=40.6
Q ss_pred HHHHHHHHHhhcCccchhHHHHHHHHHHHH-HHHHhHHHHHHHHHHhH-H-HHHHHHHHHHHHHHH
Q 017012 180 ISSTWARVIDVMDSESGSRLFGFIGAGATL-GQLFGSLFAAGMAFLGP-Y-LLLFAACLMELAAQS 242 (379)
Q Consensus 180 ~slfW~~~~di~~~~eakR~fgligag~~l-G~I~G~~l~~~la~~g~-~-lll~aa~ll~l~~~~ 242 (379)
....|.+++|.++++.+-..+|+....+++ ++...|.+.+.+...|. . .++..++...+++..
T Consensus 354 ~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~ 419 (432)
T PRK10406 354 TSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLV 419 (432)
T ss_pred HHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHH
Confidence 357889999999999999999999876665 23346666665544442 2 333333333344444
No 123
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.50 E-value=0.016 Score=60.31 Aligned_cols=144 Identities=15% Similarity=0.134 Sum_probs=86.2
Q ss_pred CccchhHHH-HHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccC
Q 017012 59 GLSKLPGLF-VGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKE 137 (379)
Q Consensus 59 Gae~lp~l~-~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (379)
+.++..++. .......++..++.|+++| |++++|.+.+.....++..+++....... .
T Consensus 256 s~~~~g~~~~~~g~i~~iiG~ll~G~L~d--r~g~~~~l~i~~~l~~l~~l~~~~l~~~~-~------------------ 314 (491)
T PRK11010 256 DAGEVGLVNKTLGLLATIVGALYGGILMQ--RLSLFRALMIFGILQGVSNAGYWLLSITD-K------------------ 314 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHHHHHhcc-c------------------
Confidence 455566654 3445678888999999999 99998876543333233333332211100 0
Q ss_pred CchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHH
Q 017012 138 DPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLF 217 (379)
Q Consensus 138 ~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l 217 (379)
+ .|. .+. ...+ ......+....++.++.|..+.+...+-||+++...++|.++++.+
T Consensus 315 -------~-------~~~----l~~----~~~l-~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~ 371 (491)
T PRK11010 315 -------N-------LYS----MGA----AVFF-ENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPV 371 (491)
T ss_pred -------c-------HHH----HHH----HHHH-HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 0 120 111 1111 1111233445678999999999999999999999999999988878
Q ss_pred HHHHH-HHhH-HHHHHHHHHHHHHHHHHHHH
Q 017012 218 AAGMA-FLGP-YLLLFAACLMELAAQSSKGI 246 (379)
Q Consensus 218 ~~~la-~~g~-~lll~aa~ll~l~~~~~~~l 246 (379)
.+.+. ..|. ..+.+.+++.++++.+...+
T Consensus 372 ~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 372 AGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 88876 4564 34444444444555554444
No 124
>PRK03699 putative transporter; Provisional
Probab=97.48 E-value=0.0075 Score=60.23 Aligned_cols=149 Identities=11% Similarity=0.146 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhcc-cC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHH
Q 017012 29 ALLHSSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSV 105 (379)
Q Consensus 29 ~~l~~~l~~F~il~~y~ilrpird~l~vs-~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~ 105 (379)
+++...+..|+...+++..-..-.....+ .| .++..++.........+..++.++++| |++||+++.......++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d--r~~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVR--FFDLQRILTVLAGLALV 283 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHH--HhchhhHHHHHHHHHHH
Confidence 34455555666666655443333333322 22 333444433334566778889999999 99999987654433222
Q ss_pred HHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Q 017012 106 SLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWA 185 (379)
Q Consensus 106 ~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~ 185 (379)
.+.+ +.. . . + .+ |... ..+++ ........+...+
T Consensus 284 ~~~~--~~~--~-~------------------~--------------~~----~~~~----~~~~~-G~~~~~~~~~~~~ 317 (394)
T PRK03699 284 LMYL--FVN--T-D------------------D--------------PS----HLLY----AILGL-GFFSSAIYTTIIT 317 (394)
T ss_pred HHHH--HHH--c-C------------------C--------------ch----HHHH----HHHHH-HHHHHHHHHHHHH
Confidence 1111 111 1 0 0 11 1111 11222 2222223345556
Q ss_pred HHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH
Q 017012 186 RVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 186 ~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~ 226 (379)
+..|..+ ++..+.+|.+...+.+|..+||.+++.+. ..|.
T Consensus 318 ~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~ 358 (394)
T PRK03699 318 LGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGL 358 (394)
T ss_pred HHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCc
Confidence 6777665 44567789999999999999999999987 4553
No 125
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.47 E-value=0.019 Score=60.17 Aligned_cols=180 Identities=16% Similarity=0.104 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHH-------HhH-HHHHHHHHHHHH-HHHHH
Q 017012 173 ALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF-------LGP-YLLLFAACLMEL-AAQSS 243 (379)
Q Consensus 173 ~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~-------~g~-~lll~aa~ll~l-~~~~~ 243 (379)
+++-.....-+=.++...++.+|.....|+..+.+++|.|+||.++..+-+ .|- +++++.+++..+ +..+.
T Consensus 145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 333333334445678899999999999999999999999999999888532 122 356655543333 33332
Q ss_pred HHHhhhcCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHH
Q 017012 244 KGIYKEIPRRPEELPPLRKADSDPRSG--ADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLS 321 (379)
Q Consensus 244 ~~l~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~ 321 (379)
+. ......+ .++... .|++ .+..+ .+++....++ --+.+++..+++|.+...++..++.
T Consensus 225 ~~----lp~~P~~---~~fl~~-~ek~~~~~~~~------~~~~~~~~~~-----~~~~~~~~a~~dp~vw~~~l~~~~~ 285 (495)
T KOG2533|consen 225 FF----LPDNPSK---AWFLTD-EEKELVVERLR------ESPSGGIENK-----FKWKGFKEALKDPGVWPFSLCYFFL 285 (495)
T ss_pred EE----ecCChhh---ccccch-HHHHHHHHHHH------hccCCCcccc-----cCHHHHHHHHhchhHHHHHHHHHHH
Confidence 22 2221100 011100 0100 00000 0111110111 1256788899999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 017012 322 AVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGT 371 (379)
Q Consensus 322 ~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~ 371 (379)
..+.+-..+..--++++...-++..+..++....+.|++..++-.+++-|
T Consensus 286 ~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr 335 (495)
T KOG2533|consen 286 KLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDR 335 (495)
T ss_pred hhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHH
Confidence 88777555554555565322345667677777778888887776666655
No 126
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.46 E-value=0.0065 Score=61.73 Aligned_cols=115 Identities=10% Similarity=0.008 Sum_probs=71.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhh
Q 017012 64 PGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAV 143 (379)
Q Consensus 64 p~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (379)
-.+.........+..+..++++| |++||+++.+.....++.+.++... . . +
T Consensus 254 g~~~~~~~i~~i~~~~~~g~l~d--r~g~r~~l~~~~~~~~v~~~l~~~~---~-~------------------~----- 304 (418)
T TIGR00889 254 SIWMSLSQFSEIFFILTIPFFLK--RFGIKKVMLLSLVAWALRFGFFAYG---D-P------------------E----- 304 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HhCcHHHHHHHHHHHHHHHHHHHHc---C-c------------------c-----
Confidence 33333444556667788899999 9999999877766654444333321 1 0 0
Q ss_pred ccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHH-HHHHHHHHHhHHHHHHHH
Q 017012 144 DQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIG-AGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 144 ~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fglig-ag~~lG~I~G~~l~~~la 222 (379)
.+. -|... +..+...+.........-.+++|.++.++..+.+|+.+ +..++|.++||.+++.+.
T Consensus 305 ---------~~~--~~~l~----l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~ 369 (418)
T TIGR00889 305 ---------YFG--YALLF----LSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMV 369 (418)
T ss_pred ---------hhh--HHHHH----HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 000 00111 11111111111223344567899999999999999997 678899999999999886
No 127
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=97.44 E-value=0.004 Score=61.10 Aligned_cols=119 Identities=16% Similarity=0.100 Sum_probs=76.6
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCc
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDP 139 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (379)
.++..++.....+.+++..++.++++| |++||+.+........+ .... .+... .
T Consensus 273 ~~~~~~~~~~~~~~~~~g~~~~g~l~d--r~g~~~~~~~~~~~~~~--~~~~-~~~~~-~-------------------- 326 (405)
T TIGR00891 273 PHTVANIVVFSNIGAIVGGCVFGFLGD--WLGRRKAYVCSLLAGQL--LIIP-VFAIG-A-------------------- 326 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCchhhhHHHHHHHHH--HHHH-HHHhC-C--------------------
Confidence 344555555556778889999999999 99999977654432211 1111 11101 0
Q ss_pred hhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHH
Q 017012 140 KAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAA 219 (379)
Q Consensus 140 ~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~ 219 (379)
+ .| ... ...++ ............+.+++|.++.+++.+.+|+....+++|..+||.+.+
T Consensus 327 -----~-------~~-----~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g 385 (405)
T TIGR00891 327 -----N-------VA-----VLG---LGLFF-QQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGA 385 (405)
T ss_pred -----c-------hH-----HHH---HHHHH-HHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHH
Confidence 0 22 111 01111 122223334567888999999999999999999999999999999999
Q ss_pred HHH-HHh
Q 017012 220 GMA-FLG 225 (379)
Q Consensus 220 ~la-~~g 225 (379)
.+. ..|
T Consensus 386 ~l~~~~g 392 (405)
T TIGR00891 386 LLAQRLD 392 (405)
T ss_pred HHHHhcc
Confidence 987 455
No 128
>PTZ00207 hypothetical protein; Provisional
Probab=97.42 E-value=0.017 Score=61.85 Aligned_cols=148 Identities=14% Similarity=0.147 Sum_probs=81.3
Q ss_pred hhccchhhcccCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhch
Q 017012 48 LPLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLES 127 (379)
Q Consensus 48 rpird~l~vs~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~ 127 (379)
.++++.+..+ .+++.++.......+ .+.++.|+++| |+|+|+++.+....+.+.++++++.....
T Consensus 51 ~~L~~~lgls--~~~l~~i~svg~~~g-~~~lp~G~L~D--r~G~R~vllig~ll~~iG~ll~ala~~~~---------- 115 (591)
T PTZ00207 51 GAMQARYNLT--QRDLSTITTVGIAVG-YFLLPYSFIYD--YLGPRPIFVLSMTVFCLGTLLFALTFQEV---------- 115 (591)
T ss_pred HHHHHHhCcC--HHHHHHHHHHHHHHH-HHHHHHHHHHH--HhCcHHHHHHHHHHHHHHHHHHHHHhccc----------
Confidence 4555555444 344555544323333 45667899999 99999999998888877777777643110
Q ss_pred hccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHH
Q 017012 128 LDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGA 207 (379)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~ 207 (379)
. ++. .| .+. +++.....-........=..+.+.|+ +++.+..|+...+.
T Consensus 116 ---i-----------------~~s-~~-----~l~----l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~ 164 (591)
T PTZ00207 116 ---I-----------------EGS-VV-----RLS----VYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFT 164 (591)
T ss_pred ---c-----------------cCc-HH-----HHH----HHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHH
Confidence 0 000 23 221 12221111111111111234677785 77888999999999
Q ss_pred HHHHHH-hHHHHHHHH-HHhHHHHHHHHHHHHHHHH
Q 017012 208 TLGQLF-GSLFAAGMA-FLGPYLLLFAACLMELAAQ 241 (379)
Q Consensus 208 ~lG~I~-G~~l~~~la-~~g~~lll~aa~ll~l~~~ 241 (379)
++|+.+ ++...+++. ..+...++.+++...+++.
T Consensus 165 gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll 200 (591)
T PTZ00207 165 GLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGIL 200 (591)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999975 565555554 2222344444433333333
No 129
>PRK03633 putative MFS family transporter protein; Provisional
Probab=97.41 E-value=0.016 Score=57.59 Aligned_cols=114 Identities=10% Similarity=0.031 Sum_probs=71.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchh
Q 017012 62 KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKA 141 (379)
Q Consensus 62 ~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (379)
...++.....+..++.....++++| |+++++++.......++..+.+. .. .
T Consensus 236 ~~g~~~~~~~~~~~~~~~~~g~l~d--r~~~~~~l~~~~~~~~~~~~~~~----~~-~---------------------- 286 (381)
T PRK03633 236 SIGFWMALLVSAGILGQWPIGRLAD--RFGRLLVLRVQVFVVILGSIAML----SQ-A---------------------- 286 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHH--HcCcHHHHHHHHHHHHHHHHHHh----hh-H----------------------
Confidence 3444444445667777888899999 99999987665444333222211 11 0
Q ss_pred hhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 142 AVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 142 ~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~l 221 (379)
+ .+. ..+++... ........-+.++|..+.++.....+.++.+.++|..+||.+++.+
T Consensus 287 ------------~-----~~~----~~~l~g~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l 344 (381)
T PRK03633 287 ------------A-----MAP----ALFILGAA-GFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAML 344 (381)
T ss_pred ------------H-----HHH----HHHHHHHH-HHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 11122111 1223345556678888888878889999999999999999999988
Q ss_pred H-HHhH
Q 017012 222 A-FLGP 226 (379)
Q Consensus 222 a-~~g~ 226 (379)
. +.|.
T Consensus 345 ~~~~g~ 350 (381)
T PRK03633 345 MQNYSD 350 (381)
T ss_pred HHHhCc
Confidence 6 5564
No 130
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=97.41 E-value=0.0081 Score=57.79 Aligned_cols=116 Identities=12% Similarity=0.023 Sum_probs=76.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCc
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDP 139 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (379)
.+...++.......+++..++.+++.| |.+|++++........+..+++.+ . . +
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~----~-~------------------~- 299 (365)
T TIGR00900 246 STHYGWVLAAFGLGALLGALLLGLLGR--YFKRMALMTGAIFVIGLAILVVGL----T-P------------------P- 299 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH--HhchhHHHHHHHHHHHHHHHHHHh----h-c------------------h-
Confidence 444555555556678888999999999 999998776543322222222111 1 0 0
Q ss_pred hhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHH
Q 017012 140 KAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAA 219 (379)
Q Consensus 140 ~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~ 219 (379)
+ .| ... +.++.............++++.|.+++|++.+.+|+.....++|..+|+.+++
T Consensus 300 ----------~--~~-----~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g 358 (365)
T TIGR00900 300 ----------N--FP-----LFL----VLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAG 358 (365)
T ss_pred ----------h--HH-----HHH----HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 12 111 11222233333445678899999999999999999999999999999999988
Q ss_pred HHH
Q 017012 220 GMA 222 (379)
Q Consensus 220 ~la 222 (379)
.+.
T Consensus 359 ~l~ 361 (365)
T TIGR00900 359 PLA 361 (365)
T ss_pred HHH
Confidence 765
No 131
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.40 E-value=0.019 Score=59.97 Aligned_cols=155 Identities=12% Similarity=0.180 Sum_probs=96.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccchhhcc-cC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCch--hHHHHHHHH
Q 017012 28 SALLHSSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKA--KALVLIHRF 102 (379)
Q Consensus 28 ~~~l~~~l~~F~il~~y~ilrpird~l~vs-~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~--rv~~~~~~~ 102 (379)
+.+...++-.|+..-++..+-.+.-....+ .| ..++-.+.+.+-+++++.+.+++++.+ |++.| +.+...+..
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~--r~g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQD--RFGPKTKRTLLISLIL 358 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCCchhHHHHHHHHH
Confidence 344444444455555555554444444443 33 334444455667789999999999999 99999 777766655
Q ss_pred HHHHHHHHHHH-HhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHH
Q 017012 103 FSVSLLVFFLL-WQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITIS 181 (379)
Q Consensus 103 f~~~~llfa~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~s 181 (379)
..+ ..+.++. +.+... .++ ..|. +- ++=++..++..-.-+
T Consensus 359 ~~~-i~~~g~~G~~~~~~------------g~~-----------------~~~~-----f~----~~a~~~G~~~G~~qs 399 (477)
T PF11700_consen 359 WII-IPLYGLFGFWPSFF------------GLK-----------------SPWE-----FW----VLAVLIGLFMGGIQS 399 (477)
T ss_pred HHH-HHHHHHHHhhhccc------------Ccc-----------------cHHH-----HH----HHHHHHHHHhhhHHH
Confidence 421 1111211 100000 000 0241 10 122234454555667
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 017012 182 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF 223 (379)
Q Consensus 182 lfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~ 223 (379)
.--++.+++.|+++...+||+.+.-+-..+++||.+.+.+..
T Consensus 400 ~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~ 441 (477)
T PF11700_consen 400 ASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITD 441 (477)
T ss_pred HHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999999873
No 132
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.39 E-value=0.014 Score=58.15 Aligned_cols=63 Identities=17% Similarity=0.156 Sum_probs=44.2
Q ss_pred HHHHHHHHHHhhcCc-cchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHH
Q 017012 179 TISSTWARVIDVMDS-ESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQ 241 (379)
Q Consensus 179 ~~slfW~~~~di~~~-~eakR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa~ll~l~~~ 241 (379)
....+...+.+..+. +++.+.+++.+...++|.++||.+++.+. ..|. ..+++++++..+++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 320 TSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 334455555555655 78899999999999999999999999887 5564 345444444444444
No 133
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.38 E-value=0.025 Score=56.27 Aligned_cols=153 Identities=12% Similarity=-0.024 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhcccC--ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q 017012 29 ALLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (379)
Q Consensus 29 ~~l~~~l~~F~il~~y~ilrpird~l~vs~G--ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~ 106 (379)
+++...+..|+...+++..-+.-.....+.| .+....++.......++..++.+++.| |+++++++.+......+.
T Consensus 206 ~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~--r~g~~~~l~~~~~~~~~~ 283 (382)
T TIGR00902 206 MNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQ--NCSARDLLLISAIACVGR 283 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHh--hCCHHHHHHHHHHHHHHH
Confidence 3444445555555555444443222222233 334555555666677778888899999 999999887666665555
Q ss_pred HHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 017012 107 LLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWAR 186 (379)
Q Consensus 107 ~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~ 186 (379)
++++++. . + .|. .+. +-.++.-.+.... ...=.+
T Consensus 284 ~~~~~~~---~--------------------~--------------~~~----~~~----~q~l~g~~~~~~~-~~~~~~ 317 (382)
T TIGR00902 284 WAIIGAI---E--------------------A--------------FPL----IFL----LQILHCGTFAVCH-LAAMRY 317 (382)
T ss_pred HHHHHhH---h--------------------h--------------HHH----HHH----HHHHHHHHHHHHH-HHHHHH
Confidence 5444331 1 0 231 111 1111222222222 234556
Q ss_pred HHhhcCccchhHHHHHHH-HHHHHHHHHhHHHHHHHH-HHhHHHHH
Q 017012 187 VIDVMDSESGSRLFGFIG-AGATLGQLFGSLFAAGMA-FLGPYLLL 230 (379)
Q Consensus 187 ~~di~~~~eakR~fglig-ag~~lG~I~G~~l~~~la-~~g~~lll 230 (379)
++|. +.++..+..++.+ .+.++|..+|+.++|.+. ++|...++
T Consensus 318 i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~~~~~ 362 (382)
T TIGR00902 318 IAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGAGTFV 362 (382)
T ss_pred HHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 7777 7667777788876 467799999999999987 55654333
No 134
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=97.38 E-value=0.021 Score=60.29 Aligned_cols=167 Identities=26% Similarity=0.227 Sum_probs=105.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhc--cchhhcccCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHH
Q 017012 27 TSALLHSSSCFFFILSAYFVVLPL--RDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFS 104 (379)
Q Consensus 27 ~~~~l~~~l~~F~il~~y~ilrpi--rd~l~vs~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~ 104 (379)
.+.++.....+++....++.+-|+ ||.+ ..|++..-++..+..+.+++.+.+.+++.+ ++++++++......++
T Consensus 220 l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l--~~~a~~yGll~a~~gvGai~Gal~~~~l~~--~~~~~~lv~~~~~~~a 295 (524)
T PF05977_consen 220 LRSVLLRSFLFNLFASAVWALLPLFARDVL--GGGASGYGLLLAAFGVGAILGALLLPRLRR--RLSSRRLVLLASLLFA 295 (524)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhhHHHHHHh--CCcHHHHHHHHHHHHHHHHHHHHHHHHhhc--ccCcchhhHHHHHHHH
Confidence 344444444455555566666564 3322 235555556665666778888888899988 9999998877666655
Q ss_pred HHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q 017012 105 VSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTW 184 (379)
Q Consensus 105 ~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW 184 (379)
+..+.+++.- + .|. .. ..+++....+ ....+.+-
T Consensus 296 ~~~~~lal~~--~-----------------------------------~~~-----~~---~~l~l~G~~~-~~~~~~~~ 329 (524)
T PF05977_consen 296 LALLLLALSP--S-----------------------------------FWL-----AL---IALFLAGAAW-IIANSSLN 329 (524)
T ss_pred HHHHHHhcch--H-----------------------------------HHH-----HH---HHHHHHHHHH-HHHHHHHH
Confidence 5544444321 0 232 11 1333333332 33444556
Q ss_pred HHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHH
Q 017012 185 ARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQSS 243 (379)
Q Consensus 185 ~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa~ll~l~~~~~ 243 (379)
..+-...+.+...|.+++.......|..+|+.+.|.++ .+|. ..++++++.+.++..+.
T Consensus 330 t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 330 TLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 67778888888999999999999988999999999988 6775 34455555554555443
No 135
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.37 E-value=0.047 Score=56.85 Aligned_cols=220 Identities=11% Similarity=0.042 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhc
Q 017012 65 GLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVD 144 (379)
Q Consensus 65 ~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (379)
+++.+.+...++.....+.+.+ |+|-|+++......-++.-++.-....
T Consensus 77 ~i~ss~~~G~i~~~iP~g~l~~--k~G~r~v~~~~~~~sa~~t~l~P~aa~----------------------------- 125 (466)
T KOG2532|consen 77 LIFSSFFWGYILGQIPGGYLAD--KFGARRVFFISGLISALLTLLTPLAAS----------------------------- 125 (466)
T ss_pred HHHHHHHHHHHHHHcCcHHHHH--HcCchHHHHHHHHHHHHHHHHHHHHHH-----------------------------
Confidence 3555667778888888899999 999999987766554322222222111
Q ss_pred cCCCCCCCccccccchhhhhhHHHHHHHHHH-HHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-
Q 017012 145 QGSTANSADWGDHGWFYVSVRMGFFLWVALL-NLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA- 222 (379)
Q Consensus 145 ~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~-~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la- 222 (379)
| +.|..+ +.|.+ .++ -.+.....=.+.+.-.++.|+.|+.+++.+|.++|.+++-.+++++.
T Consensus 126 ---------~--~~~~~~-~~R~l----qGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~ 189 (466)
T KOG2532|consen 126 ---------I--GFYLLL-VLRFL----QGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCE 189 (466)
T ss_pred ---------h--cchhhH-HHHHH----hHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 1 112212 22442 222 22233344455677789999999999999999999999988888886
Q ss_pred H-Hh-HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHH
Q 017012 223 F-LG-PYLLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILD 300 (379)
Q Consensus 223 ~-~g-~~lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
. +| +..+.+.+++..+-..+..++++.....+ |. -++.|.+ ..++ .| .+.+.+++ ..-
T Consensus 190 s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h----~~---is~~El~--~I~~--~k-----~~~~~~~~----~~v 249 (466)
T KOG2532|consen 190 SSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKH----PN---ISEKELK--YIEK--GK-----SEAHVKKK----PPV 249 (466)
T ss_pred cCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccC----CC---CCHHHHH--HHHh--cc-----cccccCCC----CCC
Confidence 3 67 34444444333333333334433211111 00 0000110 0000 01 00000110 111
Q ss_pred HHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 017012 301 GLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLA 351 (379)
Q Consensus 301 g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G 351 (379)
-.+.|++||-++.+.+-.+.......++--..-.+.++-..-+-+-+.+++
T Consensus 250 P~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~s 300 (466)
T KOG2532|consen 250 PYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLS 300 (466)
T ss_pred CHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHH
Confidence 267899999998888777776654444444334445544443334453333
No 136
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=97.36 E-value=0.01 Score=60.56 Aligned_cols=44 Identities=18% Similarity=0.203 Sum_probs=35.4
Q ss_pred HHHHHHhhcCccchhHHHHHHHHHHHHHHH-HhHHHHHHHH-HHhH
Q 017012 183 TWARVIDVMDSESGSRLFGFIGAGATLGQL-FGSLFAAGMA-FLGP 226 (379)
Q Consensus 183 fW~~~~di~~~~eakR~fgligag~~lG~I-~G~~l~~~la-~~g~ 226 (379)
.+..+.|.++++++.+.+|+.+..+++|+. .||.+.+.+. +.|.
T Consensus 368 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~ 413 (452)
T PRK11273 368 IGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW 413 (452)
T ss_pred HHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcc
Confidence 345678999999999999999998888865 4788888876 5563
No 137
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=97.35 E-value=0.03 Score=56.09 Aligned_cols=42 Identities=14% Similarity=0.191 Sum_probs=34.3
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH
Q 017012 184 WARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 184 W~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~ 226 (379)
+..+.|.. ++++.+.+|+.+.+.++|.++||.+.+.+. ..|.
T Consensus 337 ~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~ 379 (402)
T TIGR00897 337 AAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGA 379 (402)
T ss_pred HHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 45566764 568889999999999999999999999886 4464
No 138
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=97.35 E-value=0.0082 Score=60.23 Aligned_cols=146 Identities=13% Similarity=0.147 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhcc--cC-ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHH
Q 017012 29 ALLHSSSCFFFILSAYFVVLPLRDEGAIS--LG-LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSV 105 (379)
Q Consensus 29 ~~l~~~l~~F~il~~y~ilrpird~l~vs--~G-ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~ 105 (379)
.++...+..++..++++..-.. -....+ .| .+...++.....+..++..++.+++++ |++||+++.+.....++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~--r~g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 223 QLLILCLAYLFYNLAFNIKNGV-QVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVK--KFGRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcch-hheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCcHHHHHHHHHHHHH
Confidence 3444444455555555543322 112222 23 222333444446778888999999999 99999987665544444
Q ss_pred HHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Q 017012 106 SLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWA 185 (379)
Q Consensus 106 ~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~ 185 (379)
.++++.+. . . + .| ... ++.+.............|+
T Consensus 300 ~~~~~~~~---~-~------------------~--------------~~-----~~~----~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 300 GYLIFFFA---G-S------------------N--------------LP-----LIL----VLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred HHHHHHHc---c-h------------------h--------------HH-----HHH----HHHHHHHHHHHHHHHHHHH
Confidence 33332220 0 0 0 12 111 2222222323344568999
Q ss_pred HHHhhcCcc-------chhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 186 RVIDVMDSE-------SGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 186 ~~~di~~~~-------eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.++|+.+.+ +..+.+|+.+....+|..+|+.+.+.+.
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll 378 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLIL 378 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999997744 3556799999999999999988887753
No 139
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=97.31 E-value=0.016 Score=59.42 Aligned_cols=41 Identities=17% Similarity=0.075 Sum_probs=35.4
Q ss_pred HHHHHHhhcCccchhHHHHHHHHHHHH-HHHHhHHHHHHHHH
Q 017012 183 TWARVIDVMDSESGSRLFGFIGAGATL-GQLFGSLFAAGMAF 223 (379)
Q Consensus 183 fW~~~~di~~~~eakR~fgligag~~l-G~I~G~~l~~~la~ 223 (379)
....++|.++.+++.+..|+++..+++ |+.++|.+.|.+..
T Consensus 370 ~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 370 IGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 345677999999999999999999997 77999999998865
No 140
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.30 E-value=0.11 Score=53.36 Aligned_cols=223 Identities=13% Similarity=0.055 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHHHHhhhc----cchhhcccCccc--hhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHH
Q 017012 31 LHSSSCFFFILSAYFVVLPL----RDEGAISLGLSK--LPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFS 104 (379)
Q Consensus 31 l~~~l~~F~il~~y~ilrpi----rd~l~vs~Gae~--lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~ 104 (379)
...++.+|+--.+||+.|-- .+++.-+.|-+. +-.+-.+..+.=-+.=-+.|.++| |-+.|+++...+..-+
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sD--r~npr~fm~~gLilsa 105 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSD--RSNPRYFMAFGLILSA 105 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcc--cCCCceeehHHHHHHH
Confidence 44666777778888888742 223333333333 222222111222223334467889 9999999888887777
Q ss_pred HHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHH---
Q 017012 105 VSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITIS--- 181 (379)
Q Consensus 105 ~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~s--- 181 (379)
+.-++|++.- + .| ++. ++++ .|...-+
T Consensus 106 i~nil~Gfs~--s-----------------------------------~~-----~~~----~l~~----lng~fQg~Gw 135 (448)
T COG2271 106 IVNILFGFSP--S-----------------------------------LF-----LFA----VLWV----LNGWFQGMGW 135 (448)
T ss_pred HHHHHHhhhh--H-----------------------------------HH-----HHH----HHHH----HHHHHhcCCC
Confidence 7777777632 1 12 111 1111 1222222
Q ss_pred -HHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHH--HHHH-HHhH-HHHHHHHHHH-HHHHHHHHHHhhhcCCCCC
Q 017012 182 -STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFA--AGMA-FLGP-YLLLFAACLM-ELAAQSSKGIYKEIPRRPE 255 (379)
Q Consensus 182 -lfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~--~~la-~~g~-~lll~aa~ll-~l~~~~~~~l~~~~~~~~~ 255 (379)
-.-..+..-|+.+|+-|..++-+..-|+|+-+-|.++ +.+. +.+- .-+++++++. ++++.+...+...+++.
T Consensus 136 pp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~-- 213 (448)
T COG2271 136 PPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSE-- 213 (448)
T ss_pred cHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcccc--
Confidence 2234577889999999999999999999999988887 5555 3333 2555555444 44444333332222221
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHH-HHHHHhchhHHHHHHHHHH-HHH
Q 017012 256 ELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDG-LRLIFSSNYLLSVSLFLWL-SAV 323 (379)
Q Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~i~~S~yL~~i~~~v~l-~~~ 323 (379)
-+||.+.. .+|+.+. + .+++.....+-++- .++++++|++..+|+-.++ |-+
T Consensus 214 GLP~ie~~------~~d~~e~---~-------~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYiv 267 (448)
T COG2271 214 GLPPIEEY------RGDPLEI---Y-------EEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVV 267 (448)
T ss_pred CCCCHHHh------hcCchhh---h-------hhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence 12222211 1111110 0 01111111355555 4899999999998876544 444
No 141
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.30 E-value=0.21 Score=50.97 Aligned_cols=141 Identities=14% Similarity=0.115 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHH-HHHhH-HHH----HHHHHHHHHH
Q 017012 166 MGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM-AFLGP-YLL----LFAACLMELA 239 (379)
Q Consensus 166 ~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~l-a~~g~-~ll----l~aa~ll~l~ 239 (379)
..|..+.-..+... .-+=++++|..++|++.|.=+++-.--.+|.++++.+.+.+ ..+++ .+. .++.+.+.++
T Consensus 94 l~F~l~G~G~~~s~-T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~ 172 (403)
T PF03209_consen 94 LAFLLYGLGVHASG-TSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLN 172 (403)
T ss_pred HHHHHHHhhHhHhH-HHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHH
Confidence 45666655544433 35668999999999999999988888888888887777765 35553 221 1233333444
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHH
Q 017012 240 AQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLW 319 (379)
Q Consensus 240 ~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~ 319 (379)
++..+...+...++ ... +.+.+.+..+.++.++++|..+....+++
T Consensus 173 ~ia~wg~E~r~~~~--------------~~~--------------------~~~~~~~f~~a~~~~~~~~~a~~f~~fl~ 218 (403)
T PF03209_consen 173 LIALWGQEPRRSRR--------------AAA--------------------AERPRPPFREAWRQVWASPQARRFFVFLF 218 (403)
T ss_pred HHHHHhcccCCccc--------------ccC--------------------CCCCCccHHHHHHHHHhCCChhHHHHHHH
Confidence 44433322111100 000 00111267899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC
Q 017012 320 LSAVVSSFFYFQKVTVIAMTVS 341 (379)
Q Consensus 320 l~~~~~~lv~~~~~~~v~~~~~ 341 (379)
+.++..+..|..-.-+..|-+.
T Consensus 219 l~t~a~~~QD~iLEPygg~Vfg 240 (403)
T PF03209_consen 219 LGTLAFFMQDVILEPYGGEVFG 240 (403)
T ss_pred HHHHHHHhhHHHcCCchhHHcC
Confidence 9999999999988888888775
No 142
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.28 E-value=0.0036 Score=63.50 Aligned_cols=193 Identities=16% Similarity=0.153 Sum_probs=118.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhh
Q 017012 63 LPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAA 142 (379)
Q Consensus 63 lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (379)
+-++|..-++++++++|++|.+.| |.++|--+.+-+.+....-++|++.=
T Consensus 108 iG~LFaskA~~qllvnp~~G~l~~--~iGy~ipm~~Gl~vmf~sTilFafg~---------------------------- 157 (464)
T KOG3764|consen 108 IGLLFASKALVQLLVNPFFGNLID--RIGYKIPMVAGLFVMFLSTILFAFGN---------------------------- 157 (464)
T ss_pred hhHHHHHHHHHHHHhcccchhhHH--HhccccHHHHHHHHHHHHHHHHHHcc----------------------------
Confidence 445665558899999999999999 99998776665555555556666621
Q ss_pred hccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHH-HHHHHHHhhcCccc-hhHHHHHHHHHHHHHHHHhHHHHHH
Q 017012 143 VDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITIS-STWARVIDVMDSES-GSRLFGFIGAGATLGQLFGSLFAAG 220 (379)
Q Consensus 143 ~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~s-lfW~~~~di~~~~e-akR~fgligag~~lG~I~G~~l~~~ 220 (379)
+ .|+ ++ ++|. ....+..... .=-+..+|.|+.|. +.+..|.+=.+.++|.++||.+++.
T Consensus 158 --s-------y~~----l~--vAR~----LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGi 218 (464)
T KOG3764|consen 158 --S-------YPM----LF--VARS----LQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGI 218 (464)
T ss_pred --h-------hHH----HH--HHHH----HhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccc
Confidence 0 231 11 3354 3443222221 23356788876554 5888999999999999999999998
Q ss_pred HH-HHhH-HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccch
Q 017012 221 MA-FLGP-YLLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAI 298 (379)
Q Consensus 221 la-~~g~-~lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (379)
+- ..|. .++++-++++++...+-+++. .+++ .+ +++ .+ +.+|
T Consensus 219 lYe~~Gk~aPFlVL~~v~Lld~~L~l~vi--~p~~---------~~---~~~---~~--------------~~~~----- 262 (464)
T KOG3764|consen 219 LYEFAGKSAPFLVLAIVLLLDGALQLLVI--EPTE---------MD---PDS---TE--------------QGTP----- 262 (464)
T ss_pred hHhhcCCcCcHHHHHHHHHHHHHHHHhee--Cccc---------cC---ccc---cc--------------cCcc-----
Confidence 86 4464 344443333334444322221 1110 00 000 00 0011
Q ss_pred HHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 017012 299 LDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSS 343 (379)
Q Consensus 299 ~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~ 343 (379)
+..+++.||...++.-+...++...++|=+..-...|.+.++
T Consensus 263 ---~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p 304 (464)
T KOG3764|consen 263 ---MWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTP 304 (464)
T ss_pred ---HHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCC
Confidence 556888999999999999999988888876666555555533
No 143
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.25 E-value=0.04 Score=56.98 Aligned_cols=43 Identities=7% Similarity=-0.113 Sum_probs=33.9
Q ss_pred HHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 180 ISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 180 ~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
....+.++.++++++.+-+-.|+....+.+++.++|.+.+++.
T Consensus 360 ~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~ 402 (490)
T PRK10642 360 TGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLV 402 (490)
T ss_pred HHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456778889999999888899866556777788888888875
No 144
>PRK03545 putative arabinose transporter; Provisional
Probab=97.24 E-value=0.037 Score=55.02 Aligned_cols=63 Identities=17% Similarity=0.141 Sum_probs=42.4
Q ss_pred HHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhHH-HHHHHHHHHHHHHHHHHHH
Q 017012 183 TWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGPY-LLLFAACLMELAAQSSKGI 246 (379)
Q Consensus 183 fW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~~-lll~aa~ll~l~~~~~~~l 246 (379)
.-..+.|..+ ++..|.+|+.+...++|..+|+.+++.+. +.|.. .+...+++..+++......
T Consensus 315 ~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 315 MQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence 4455667655 67778999999999999999999999887 56643 3333344444444443333
No 145
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.22 E-value=0.14 Score=52.33 Aligned_cols=153 Identities=14% Similarity=0.113 Sum_probs=88.5
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHhhhccchhhcccCccchhHH-HHHH-HHHHHHHHHHHHHhhcCCCCCchhHHHHHH
Q 017012 23 HPHETSALLHSSSCFFFILSAYFVVLPLRDEGAISLGLSKLPGL-FVGS-LILTLIAAPVSTLIFSLPNLSKAKALVLIH 100 (379)
Q Consensus 23 ~~~E~~~~l~~~l~~F~il~~y~ilrpird~l~vs~Gae~lp~l-~~~~-~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~ 100 (379)
|+...+.+.+..++++.-.+.+++.-|+--.+-...|-+.=..- ..++ .+...++=.+||-+.| |+|.|+...+..
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~d--rfGgR~~~~~s~ 86 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTD--RFGGRKWTILSM 86 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhc--ccCchHHHHHHH
Confidence 34445556666666666666666666665555433443333322 2233 4477888899999999 999999987776
Q ss_pred HHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHH
Q 017012 101 RFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITI 180 (379)
Q Consensus 101 ~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~ 180 (379)
...++.-+..++..+.. + .| -+... .++ +++ .-.+-
T Consensus 87 ~l~~IP~~~~~~a~~~~---------------------------~-------~~-----~ll~~-gll---~G~-~GasF 122 (417)
T COG2223 87 LLLLIPCLGLAFAVTYP---------------------------S-------TW-----QLLVI-GLL---LGL-AGASF 122 (417)
T ss_pred HHHHHHHHHHHHHccCC---------------------------c-------hH-----HHHHH-HHH---Hhc-cccee
Confidence 66555544444432110 0 12 11100 111 111 11222
Q ss_pred HHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 181 SSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 181 slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
+.--..++.-|++|.----.|+-| .||+|.-+-..++-.++
T Consensus 123 av~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~ 163 (417)
T COG2223 123 AVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVA 163 (417)
T ss_pred hcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHH
Confidence 233445788888888777889888 88888877655554444
No 146
>PRK11663 regulatory protein UhpC; Provisional
Probab=97.15 E-value=0.03 Score=56.91 Aligned_cols=45 Identities=18% Similarity=0.111 Sum_probs=39.1
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH
Q 017012 182 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 182 lfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~ 226 (379)
.++..++|.++++++.+..|+.+..+.+|..+||.+.+.+. +.|.
T Consensus 357 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~ 402 (434)
T PRK11663 357 LIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHW 402 (434)
T ss_pred HHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhccc
Confidence 45567889999999999999999999999999999998886 4563
No 147
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.12 E-value=0.0099 Score=61.03 Aligned_cols=48 Identities=13% Similarity=0.135 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHh
Q 017012 178 ITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 225 (379)
Q Consensus 178 ~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g 225 (379)
......++.+.|.++.++..+.+|++..+.++|.++||.+++.+. ..+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g 397 (455)
T TIGR00892 349 SVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK 397 (455)
T ss_pred hHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC
Confidence 344567888999999999999999999999999999999999875 443
No 148
>PRK15075 citrate-proton symporter; Provisional
Probab=97.11 E-value=0.043 Score=55.67 Aligned_cols=47 Identities=13% Similarity=0.085 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHH-HHHHHHHHHhHHHHHHHH-HHh
Q 017012 179 TISSTWARVIDVMDSESGSRLFGFIG-AGATLGQLFGSLFAAGMA-FLG 225 (379)
Q Consensus 179 ~~slfW~~~~di~~~~eakR~fglig-ag~~lG~I~G~~l~~~la-~~g 225 (379)
.....|....|.++.+++.+-.|+.. .|..+++.++|.+.+.+. ..|
T Consensus 348 ~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 348 YNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 33456788999999999999999864 444455677888888776 445
No 149
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=97.06 E-value=0.0068 Score=58.15 Aligned_cols=119 Identities=18% Similarity=0.262 Sum_probs=77.4
Q ss_pred cchhhcccCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhcc
Q 017012 51 RDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDA 130 (379)
Q Consensus 51 rd~l~vs~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~ 130 (379)
++....+ |.+...++.........+..++.++++| |+++++...+.....++..+.+.+.....
T Consensus 234 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 297 (352)
T PF07690_consen 234 QEVLGFS-GPSQAGLLFSIFGIVGIIGSLLAGRLSD--RFGRRRRLLIAILLLILGALGLLLLPFSS------------- 297 (352)
T ss_dssp CHHHHCC-THHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHCCSHHHC-------------
T ss_pred hhccCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCcHHHHHHHHHHHHHHHHHHHHHHHhh-------------
Confidence 4444443 3445555555556677777999999999 99998877666655443333332211110
Q ss_pred ccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHH
Q 017012 131 VSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLG 210 (379)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG 210 (379)
+ . .| .+. .++...............++.|..++|+..+.+|+.+...++|
T Consensus 298 -------~------~-------~~-----~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~ 347 (352)
T PF07690_consen 298 -------S------P-------VW-----LII-----ALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLG 347 (352)
T ss_dssp -------H------H-------HH-----HHH-----HHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHH
T ss_pred -------h------H-------HH-----HHH-----HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 0 0 12 221 2222333444556789999999999999999999999999999
Q ss_pred HHHhH
Q 017012 211 QLFGS 215 (379)
Q Consensus 211 ~I~G~ 215 (379)
.++||
T Consensus 348 ~~igP 352 (352)
T PF07690_consen 348 GIIGP 352 (352)
T ss_dssp HHHHH
T ss_pred HHHCC
Confidence 99997
No 150
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.05 E-value=0.54 Score=49.15 Aligned_cols=87 Identities=17% Similarity=0.070 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhc
Q 017012 65 GLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVD 144 (379)
Q Consensus 65 ~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (379)
+....+.+++.+..|+.|.++| +-++||-+...... ...+..+.+....+ +
T Consensus 74 ~~~sis~l~~all~P~lGa~aD--~~~~Rk~~l~~~~~---~~~~~~~~l~~v~~------------------~------ 124 (477)
T PF11700_consen 74 YANSISGLLQALLAPFLGAIAD--YGGRRKRFLLIFTL---LGVLATALLWFVSP------------------G------ 124 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc--ccccchHHHHHHHH---HHHHHHHHHHHhCc------------------c------
Confidence 4445667889999999999999 88888876543322 12222222211111 0
Q ss_pred cCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccch
Q 017012 145 QGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESG 196 (379)
Q Consensus 145 ~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~ea 196 (379)
.| .. +.++|+...+.........=++.-|+.+.++.
T Consensus 125 --------~~-----~~---~~~l~iia~v~~~~~~vfyna~LP~la~~~~~ 160 (477)
T PF11700_consen 125 --------QW-----WL---ALVLFIIANVGYEASNVFYNAYLPDLARPEPR 160 (477)
T ss_pred --------hH-----HH---HHHHHHHHHHHHHHHHHHHHHHhHhhcCCChh
Confidence 23 12 24677777766555666777889999999888
No 151
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=97.04 E-value=0.078 Score=52.90 Aligned_cols=111 Identities=12% Similarity=-0.000 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCC
Q 017012 68 VGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGS 147 (379)
Q Consensus 68 ~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (379)
......+++..++.++++| |+++++.+.+....+++..+++......... +
T Consensus 258 ~~~~~~~~~g~~~~g~l~~--r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------------------------~-- 308 (406)
T PRK15402 258 VPVFGALIAGNLTLARLTS--RRPLRSLIRMGLWPMVAGLLLAALATVISSH-------------------------A-- 308 (406)
T ss_pred HHHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHHHHHcccc-------------------------c--
Confidence 3334466777889999999 9999998776555444444444332211100 0
Q ss_pred CCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 148 TANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 148 ~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.| |.+.+ .+++-.. .............+..+ ++..|.++..+....+|..+|+.+++.+.
T Consensus 309 -----~~----~~~~~--~~~~g~g---~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~g~~~~~~l~ 368 (406)
T PRK15402 309 -----YL----WLTAG--LSLYAFG---IGLANAGLYRLTLFSSD-VSKGTVSAAMGMLSMLIFTVGIELSKHAY 368 (406)
T ss_pred -----HH----HHHHH--HHHHHHH---HHHHhhhHHHHHhhhcc-ccccHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 11 12211 1211111 11122333444444443 78889999999999999999998888775
No 152
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.03 E-value=0.027 Score=55.05 Aligned_cols=144 Identities=10% Similarity=0.023 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhccc--CccchhHHHHHHHHHHHHHHHHHHHhhcCCCCC-chhHHHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLS-KAKALVLIHRFFSVS 106 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs~--Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~-r~rv~~~~~~~f~~~ 106 (379)
++...+.+++....++.....-.....+. +.+....+.......+++..++.++++| |++ ||+...+.....++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~d--r~~~~~~~~~~~~~~~~~~ 276 (355)
T TIGR00896 199 AWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALAR--RVKDQRGIVAVLAVLQLVG 276 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHh--hhccchHHHHHHHHHHHHH
Confidence 33344444444444544333222222222 3344444555556778888999999999 995 555544433333333
Q ss_pred HHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 017012 107 LLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWAR 186 (379)
Q Consensus 107 ~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~ 186 (379)
++++.+.. . .+. |.+. + ..+..........++.
T Consensus 277 ~~~~~~~~--~-----------------------------------~~~---~~~~----~---l~g~~~g~~~~~~~~~ 309 (355)
T TIGR00896 277 LCGLLFAP--M-----------------------------------HGL---WAWA----L---VLGLGQGGAFPLALTL 309 (355)
T ss_pred HHHHHHhh--h-----------------------------------hHH---HHHH----H---HHHHhhhhHhHHHHHH
Confidence 33222210 0 110 0110 1 1122222333456666
Q ss_pred HHhhc-CccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 187 VIDVM-DSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 187 ~~di~-~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
+.|.. +.+++.+.+|+....+.+|..+||.+.+.+.
T Consensus 310 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~ 346 (355)
T TIGR00896 310 IGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLH 346 (355)
T ss_pred HHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66554 4567788999999999999999999988876
No 153
>PRK09669 putative symporter YagG; Provisional
Probab=97.01 E-value=0.021 Score=58.15 Aligned_cols=110 Identities=18% Similarity=0.318 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhcc
Q 017012 66 LFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQ 145 (379)
Q Consensus 66 l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (379)
+.....+.+++..++.+++++ |+++++.+......+++..+...+ . ... +
T Consensus 269 ~~~~~~i~~ii~~~~~~~l~~--r~gk~~~~~~~~~~~~~~~~~~~~-~--~~~------------------~------- 318 (444)
T PRK09669 269 FLVTGMIAGLFGALLSERLLG--KFDRVRAFKWTIVAFVILSALIFF-I--PPS------------------N------- 318 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HhChHHHHHHHHHHHHHHHHHHHH-h--Ccc------------------h-------
Confidence 333445667788899999999 999999887665444332221111 1 100 0
Q ss_pred CCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccch---hH----HHHHHHHHHHHHHHHhHHHH
Q 017012 146 GSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESG---SR----LFGFIGAGATLGQLFGSLFA 218 (379)
Q Consensus 146 ~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~ea---kR----~fgligag~~lG~I~G~~l~ 218 (379)
.| .+. +..+...+-......+.|+.++|+.|.+|. +| .|+..+....+|..+|+.++
T Consensus 319 -------~~-----~~~----~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~ 382 (444)
T PRK09669 319 -------VW-----LIF----ALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVV 382 (444)
T ss_pred -------HH-----HHH----HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 22 111 111112333345557899999999987774 33 57888888888888888877
Q ss_pred HHH
Q 017012 219 AGM 221 (379)
Q Consensus 219 ~~l 221 (379)
+.+
T Consensus 383 g~l 385 (444)
T PRK09669 383 GWI 385 (444)
T ss_pred HHH
Confidence 654
No 154
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.00 E-value=0.072 Score=55.15 Aligned_cols=74 Identities=11% Similarity=-0.035 Sum_probs=43.5
Q ss_pred HHHHHHHHhchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 299 LDGLRLIFSSNYLLSVSLFLWL-SAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 299 ~~g~~~i~~S~yL~~i~~~v~l-~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
..+++..++.|.+....+++++ |....+..+..+. .-.+....+ ..+.|.+....++.+++.+... ++.++|+|
T Consensus 242 ~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~-~~~~~lG~s---~~~~G~~~~~~~v~~i~g~~~~-~~~~~~~~ 316 (468)
T TIGR00788 242 ILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFC-ATTQCLPGG---PSFSGMSKVVGNLGSLCGVGGY-DRFLKTFP 316 (468)
T ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEE-EEcccCCCC---cchhhhHHHHHHHHHHHHHHHH-HHHHhhCC
Confidence 3456666788888776676666 5443333322110 000011222 3455888888888888888765 68888876
No 155
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=96.99 E-value=0.53 Score=48.12 Aligned_cols=145 Identities=18% Similarity=0.283 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhc----cchhhcc-cCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPL----RDEGAIS-LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFS 104 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpi----rd~l~vs-~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~ 104 (379)
+.....+||.-.+...+..++ ++..=++ ..+..+.+.+.+.+. ..+..-+++.+ |+|.++=+..-+..++
T Consensus 15 ~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf---~~~lpa~~~~k--k~gyk~gi~lgL~l~a 89 (422)
T COG0738 15 FVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYF---IMSLPAGLLIK--KLGYKAGIVLGLLLYA 89 (422)
T ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHH---HHhccHHHHHH--HhhhHHHHHHHHHHHH
Confidence 333444455444444443333 3333333 355566666554433 23344467777 9999987766665554
Q ss_pred HHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q 017012 105 VSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTW 184 (379)
Q Consensus 105 ~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW 184 (379)
+...+|+ |... . ..|. .+.+ .+|+..++.+..- ...-
T Consensus 90 vg~~lF~----pAa~-------------------------~------~~y~----~FL~---~lFila~Gi~~Le-taaN 126 (422)
T COG0738 90 VGAALFW----PAAS-------------------------S------KSYG----FFLV---ALFILASGIGLLE-TAAN 126 (422)
T ss_pred HHHHHHh----hhhh-------------------------h------hhHH----HHHH---HHHHHHhhhHHHH-hccc
Confidence 4444433 2210 0 0221 1221 3455444433221 2455
Q ss_pred HHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 185 ARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 185 ~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.++.+..++|++.|.-.+..+.-.+|+++||.+++.+.
T Consensus 127 p~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~li 164 (422)
T COG0738 127 PYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLI 164 (422)
T ss_pred hHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999998864
No 156
>PF13347 MFS_2: MFS/sugar transport protein
Probab=96.99 E-value=0.0044 Score=62.76 Aligned_cols=146 Identities=16% Similarity=0.227 Sum_probs=92.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccchhhcc--cCccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHH
Q 017012 28 SALLHSSSCFFFILSAYFVVLPLRDEGAIS--LGLSK-LPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFS 104 (379)
Q Consensus 28 ~~~l~~~l~~F~il~~y~ilrpird~l~vs--~Gae~-lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~ 104 (379)
+.+....+..|+..+++.+..+.- ..+.+ .|.+. ...+.....+.+++..|+.+++++ |++++|........++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~-~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~--r~gk~~~~~~~~~~~~ 301 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFL-PYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSK--RFGKKKVYIIGLLLAA 301 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHH-HHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHH--HccceeehhhhHHHHH
Confidence 455556666666666666554432 22333 45443 334444667788999999999999 9999999988888877
Q ss_pred HHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q 017012 105 VSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTW 184 (379)
Q Consensus 105 ~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW 184 (379)
+..+++.+.-..+ .| |.+ ++.+...+.........|
T Consensus 302 ~~~~~~~~~~~~~-----------------------------------~~----~~~-----i~~~l~gi~~~~~~~~~~ 337 (428)
T PF13347_consen 302 LGFLLLFFLGPGS-----------------------------------PW----LVL-----ILFILAGIGYGAFFVIPW 337 (428)
T ss_pred HHHHHHHHHHhhh-----------------------------------HH----HHH-----HHHHHhHhhhcccccccc
Confidence 7776665533101 23 112 222233333444557899
Q ss_pred HHHHhhcCccchh---H----HHHHHHHHHHHHHHHhHHHHHH
Q 017012 185 ARVIDVMDSESGS---R----LFGFIGAGATLGQLFGSLFAAG 220 (379)
Q Consensus 185 ~~~~di~~~~eak---R----~fgligag~~lG~I~G~~l~~~ 220 (379)
+..+|+.+.+|-| | .|++.+....+|.-+|+.+.+.
T Consensus 338 a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~ 380 (428)
T PF13347_consen 338 AMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGL 380 (428)
T ss_pred cccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 9999999988754 4 5666666666666666555443
No 157
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=96.95 E-value=0.058 Score=61.22 Aligned_cols=114 Identities=11% Similarity=-0.060 Sum_probs=74.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchh
Q 017012 62 KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKA 141 (379)
Q Consensus 62 ~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (379)
...++.....+.+++..++.+++++ |+++++++.+....+++..+++.+.- .
T Consensus 270 ~~g~~~~~~~ig~~~g~~~~g~l~~--r~~~~~~~~~~~~~~~~~~~~~~~~~--~------------------------ 321 (1146)
T PRK08633 270 QVQYLLAASAIGIGIGSLLAGRLSG--RHIELGLVPLGALGLALSLFLLPTAP--S------------------------ 321 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC--CceEccchhHHHHHHHHHHHHHHHhh--h------------------------
Confidence 3445555556677888999999999 99998877665544443333332211 0
Q ss_pred hhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 142 AVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 142 ~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~l 221 (379)
.| ... ++.+.............++++.+.++.+++.+.+|+.+...++|.++|+.+++.+
T Consensus 322 -----------~~-----~~~----~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l 381 (1146)
T PRK08633 322 -----------LA-----SVL----VLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLF 381 (1146)
T ss_pred -----------HH-----HHH----HHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 12 111 1111122223334446788999999999999999999999999998888877766
Q ss_pred HH
Q 017012 222 AF 223 (379)
Q Consensus 222 a~ 223 (379)
..
T Consensus 382 ~~ 383 (1146)
T PRK08633 382 SG 383 (1146)
T ss_pred HH
Confidence 53
No 158
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=96.90 E-value=0.13 Score=50.99 Aligned_cols=43 Identities=19% Similarity=0.149 Sum_probs=29.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHH
Q 017012 61 SKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSV 105 (379)
Q Consensus 61 e~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~ 105 (379)
+..-.+........++..++.+++.| |+++++++........+
T Consensus 240 ~~~g~~~~~~~~~~~~~~~~~g~l~~--r~~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 240 STIGYLWSLGVVAEVLIFAFSNRLFR--RWSARDLLLLSAICGVV 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH--HCCHHHHHHHHHHHHHH
Confidence 33444444445677777888999999 99999997665544433
No 159
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=96.86 E-value=0.083 Score=52.90 Aligned_cols=47 Identities=17% Similarity=0.007 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 176 NLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 176 ~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.......+|++.+|.+++|.+.+..|+.+..+.+|+++||.+.+.+.
T Consensus 294 ~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 294 MLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred hhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 34444579999999999999999999999999999999998877654
No 160
>PRK10504 putative transporter; Provisional
Probab=96.83 E-value=0.1 Score=53.12 Aligned_cols=114 Identities=11% Similarity=0.133 Sum_probs=71.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhh
Q 017012 63 LPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAA 142 (379)
Q Consensus 63 lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (379)
..++.....+..++..++.++++| |++||+++.+.....++..+++.+. . . +
T Consensus 299 ~g~~~~~~~~~~~~~~~~~~~l~~--r~g~~~~~~~~~~~~~~~~~~~~~~---~-~------------------~---- 350 (471)
T PRK10504 299 AGLMMIPMVLGSMGMKRIVVQVVN--RFGYRRVLVATTLGLALVSLLFMLV---A-L------------------L---- 350 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HcCchHHHHHHHHHHHHHHHHHHhc---c-c------------------c----
Confidence 333444445556667789999999 9999999866555443333333221 1 0 0
Q ss_pred hccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 143 VDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 143 ~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~l 221 (379)
.|. |... +.++...+-........+..+.+..+.++..+.+++.+....+|..+|+.+++.+
T Consensus 351 ----------~~~---~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~l 412 (471)
T PRK10504 351 ----------GWY---YLLP----FVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLL 412 (471)
T ss_pred ----------ccH---HHHH----HHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 110 1111 1222222223334456667788888889999999999999999999999988876
No 161
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=96.83 E-value=0.025 Score=54.60 Aligned_cols=44 Identities=18% Similarity=0.162 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 179 TISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 179 ~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.....|..++|.++.+++.+.+|+.+...++|..+||.+.+.+.
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 370 (379)
T TIGR00881 327 PQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLA 370 (379)
T ss_pred hhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHH
Confidence 34467889999999999999999999999999999999988876
No 162
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=96.83 E-value=0.016 Score=59.89 Aligned_cols=40 Identities=25% Similarity=0.310 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHH
Q 017012 179 TISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAA 219 (379)
Q Consensus 179 ~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~ 219 (379)
....+|+.+.++. ++++...+|++++++++|.+++|.+.+
T Consensus 365 ~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~ 404 (476)
T PLN00028 365 ACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF 404 (476)
T ss_pred hhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH
Confidence 3346788888765 467778999999999999998887643
No 163
>PRK10429 melibiose:sodium symporter; Provisional
Probab=96.79 E-value=0.043 Score=56.53 Aligned_cols=150 Identities=13% Similarity=0.013 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccchhhcc--cCccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHH
Q 017012 28 SALLHSSSCFFFILSAYFVVLPLRDEGAIS--LGLSK-LPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFS 104 (379)
Q Consensus 28 ~~~l~~~l~~F~il~~y~ilrpird~l~vs--~Gae~-lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~ 104 (379)
+.++..++..|+...++++.-..-- .... .|.+. ...+.....+.+++..|+.+++++ |+++|+.+.+.....+
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~-y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~--r~gkk~~~~~~~~~~~ 307 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAI-YYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVK--SLSRRILWAGASIFPV 307 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhee-eEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCcHHHHHHHHHHHH
Confidence 4455555555555555555443322 2222 23333 333333334677888899999999 9999999876554444
Q ss_pred HHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q 017012 105 VSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTW 184 (379)
Q Consensus 105 ~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW 184 (379)
+..+.+.+..... + + . .| ... +.-+...+-........|
T Consensus 308 ~~~~~~~~~~~~~-~------------------~------~-------~~-----~~~----i~~~l~g~~~~~~~~~~~ 346 (473)
T PRK10429 308 LSCGVLLLMGLAA-P------------------H------N-------AL-----LIV----IAGILLNIGTALFWVLQV 346 (473)
T ss_pred HHHHHHHHHhccC-c------------------h------h-------HH-----HHH----HHHHHHHHHHHHHHHHHH
Confidence 3333332211101 0 0 0 12 111 111111222334456789
Q ss_pred HHHHhhcCccch---hH----HHHHHHHHHHHHHHHhHHHHHHH
Q 017012 185 ARVIDVMDSESG---SR----LFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 185 ~~~~di~~~~ea---kR----~fgligag~~lG~I~G~~l~~~l 221 (379)
+.++|+.+.+|- +| .||..+....+|.-+|+.+.+.+
T Consensus 347 am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~ 390 (473)
T PRK10429 347 IMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVV 390 (473)
T ss_pred HHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999886652 22 68888998899998988888775
No 164
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=96.75 E-value=0.18 Score=49.25 Aligned_cols=115 Identities=16% Similarity=0.196 Sum_probs=66.4
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCc
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDP 139 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (379)
.+...++.....+..++..++.++++| |++||+.+......+.+..+++.+......
T Consensus 241 ~~~~g~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 297 (385)
T TIGR00710 241 PSVFGLLFALNIIAMIFGGFLNGRFIK--KWGAKSLLRMGLILFAVSAVLLEITAILGL--------------------- 297 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------
Confidence 344445555556678888999999999 999999887765555544444443221110
Q ss_pred hhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHH-HHHHhHHHH
Q 017012 140 KAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATL-GQLFGSLFA 218 (379)
Q Consensus 140 ~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~l-G~I~G~~l~ 218 (379)
. .+ +... ........-........+..+.|..+ +++.+..++.+..... |.+.|+.++
T Consensus 298 -----~-------~~----~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 298 -----G-------SW----AMII----GPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred -----c-------hH----HHHH----HHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 01 0111 11111112233445577788888875 5677888888776654 555555543
No 165
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.73 E-value=0.22 Score=53.55 Aligned_cols=116 Identities=7% Similarity=-0.030 Sum_probs=70.6
Q ss_pred cCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccC
Q 017012 58 LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKE 137 (379)
Q Consensus 58 ~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (379)
.|.++..|+-++-.+.+.+..|++|+|+| .+|||.++.....+..+..++-+-.-
T Consensus 75 G~~~~~~w~~~~~~l~~av~~~~~G~LSD--lfGRr~~~i~g~~l~vvG~Iv~atA~----------------------- 129 (599)
T PF06609_consen 75 GGSDNWSWFSTAWTLASAVSFPFVGRLSD--LFGRRYFFIIGSLLGVVGSIVCATAQ----------------------- 129 (599)
T ss_pred CCCccchHHHHHHHHHHHHHHHhhHHHHH--HhcchHHHHHHHHHHHhHHHHhhcCC-----------------------
Confidence 57888999877667788888999999999 99999998776655433333332210
Q ss_pred CchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHH
Q 017012 138 DPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLF 217 (379)
Q Consensus 138 ~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l 217 (379)
+ +. .|+ .+.++|=.. .....+.-..++|+.+.+-+-..+++.....-....+||.+
T Consensus 130 ~----------------~~---~~i-ag~~l~Gvg----aG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~i 185 (599)
T PF06609_consen 130 N----------------MN---TFI-AGMVLYGVG----AGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLI 185 (599)
T ss_pred c----------------HH---HHH-HHHHHHHHh----hHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHH
Confidence 0 00 122 234544222 23334555668999988755444544444444444456666
Q ss_pred HHHHH
Q 017012 218 AAGMA 222 (379)
Q Consensus 218 ~~~la 222 (379)
+..+.
T Consensus 186 a~~~~ 190 (599)
T PF06609_consen 186 AQLFA 190 (599)
T ss_pred HHHhc
Confidence 65554
No 166
>PRK09848 glucuronide transporter; Provisional
Probab=96.72 E-value=0.047 Score=55.55 Aligned_cols=148 Identities=16% Similarity=0.147 Sum_probs=82.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccchhhcc-cCccc-hhHHHH-HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHH
Q 017012 28 SALLHSSSCFFFILSAYFVVLPLRDEGAIS-LGLSK-LPGLFV-GSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFS 104 (379)
Q Consensus 28 ~~~l~~~l~~F~il~~y~ilrpird~l~vs-~Gae~-lp~l~~-~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~ 104 (379)
+.+....+..++..+++...-..-.-.... .|.+. ...+.. ...+..++..|+.+++.+ |+++++++.+....++
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--r~g~~~~~~~g~~~~~ 305 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVA--RIGKKNTFLIGALLGT 305 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCcHHHHHHHHHHHH
Confidence 345555666666666665554332222222 33322 222322 224567788999999999 9999999877665554
Q ss_pred HHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q 017012 105 VSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTW 184 (379)
Q Consensus 105 ~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW 184 (379)
+.++++.+ . . . + + .|. .+. ...+ ..+-........|
T Consensus 306 i~~~~~~~--~-~-~------------------~------~-------~~~----~~~----~~~l-~g~G~~~~~~~~~ 341 (448)
T PRK09848 306 CGYLLFFW--V-S-V------------------W------S-------LPV----ALV----ALAI-ASIGQGVTMTVMW 341 (448)
T ss_pred HHHHHHHH--c-C-c------------------h------h-------HHH----HHH----HHHH-HHHHHHHHHHHHH
Confidence 44443332 1 1 0 0 0 231 111 1111 1222234455789
Q ss_pred HHHHhhcCccch-------hHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 185 ARVIDVMDSESG-------SRLFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 185 ~~~~di~~~~ea-------kR~fgligag~~lG~I~G~~l~~~l 221 (379)
+..+|+.+.+|. ...+|+.+....+|..+|+.+.+.+
T Consensus 342 al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~ 385 (448)
T PRK09848 342 ALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFI 385 (448)
T ss_pred HHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988774 3357777777777777777666543
No 167
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=96.67 E-value=0.035 Score=56.37 Aligned_cols=116 Identities=8% Similarity=0.040 Sum_probs=67.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchh
Q 017012 62 KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKA 141 (379)
Q Consensus 62 ~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (379)
+..++.....+..++..++.+++.| |++||+++.+.....++..+++.+.. . + +
T Consensus 292 ~~g~~~~~~~~~~~~~~~~~g~l~~--r~~~~~~~~~g~~~~~~~~~~~~~~~--~-~------------------~--- 345 (485)
T TIGR00711 292 QAGLHILPVGLAPMLSSPIAGRMGD--KIDPRKLVTIGLILYAVGFYWRAFTF--T-P------------------D--- 345 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--hcCcHHHHHHHHHHHHHHHHHHhccC--C-C------------------C---
Confidence 3344444456678889999999999 99999886554433333222222111 1 0 0
Q ss_pred hhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 142 AVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 142 ~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~l 221 (379)
. ..| ... ....+..-.... ........+.+..++++..+..|+.+...++|+.+|+.+.+.+
T Consensus 346 ---~------~~~-----~~~---~~~~l~g~g~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~ 407 (485)
T TIGR00711 346 ---T------PFL-----AIA---LPQFIRGFGMGC-FFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTI 407 (485)
T ss_pred ---C------CHH-----HHH---HHHHHHHHHHHH-HHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 011 111 011111111122 2223445566778889999999999999999999998887654
No 168
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.65 E-value=0.026 Score=58.69 Aligned_cols=146 Identities=14% Similarity=0.070 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhcc--cCccchhHHHH-HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAIS--LGLSKLPGLFV-GSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs--~Gae~lp~l~~-~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~ 106 (379)
++.+.++.+|..+++.+-..+----+.- .+.|..++... .....+++..+++.+|++ |+++|+++.+.....++.
T Consensus 238 ~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~--~~gkk~~~~~~~~~~~i~ 315 (467)
T COG2211 238 LLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVK--KFGKKKLFLIGLLLLAVG 315 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHH--HhchHHHHHHHHHHHHHH
Confidence 4444444455555555444333333333 46788887655 445556666999999999 999999998886665555
Q ss_pred HHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 017012 107 LLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWAR 186 (379)
Q Consensus 107 ~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~ 186 (379)
.+++.+.- . + + .++ . .++.+...+-......+-|+.
T Consensus 316 ~~~~~f~~----~------------------~------~-------~~l----~-----~~~~~i~~~g~~~~~~l~wam 351 (467)
T COG2211 316 YLLLYFTP----A------------------G------S-------VVL----I-----VVALIIAGVGTGIANPLPWAM 351 (467)
T ss_pred HHHHHhhc----C------------------c------c-------hHH----H-----HHHHHHHHHHhhccccccHHH
Confidence 55444421 1 0 0 231 0 112122223345566799999
Q ss_pred HHhhcCccchh---H----HHHHHHHHHHHHHHHhHHHHHHH
Q 017012 187 VIDVMDSESGS---R----LFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 187 ~~di~~~~eak---R----~fgligag~~lG~I~G~~l~~~l 221 (379)
++|+-|.+|-| | .|+..+...=+|.-+|+.+.++.
T Consensus 352 ~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~ 393 (467)
T COG2211 352 VADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWI 393 (467)
T ss_pred hcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999953 4 58888888878888877666653
No 169
>PRK10091 MFS transport protein AraJ; Provisional
Probab=96.63 E-value=0.26 Score=48.92 Aligned_cols=46 Identities=7% Similarity=0.016 Sum_probs=32.9
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHH
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSL 107 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~ 107 (379)
.++..++.........+..++.++++| |++++++..+.....++.+
T Consensus 234 ~~~~~~~~~~~~~~~~ig~~~~g~l~~--r~~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 234 ETSMTFIMMLVGLGMVLGNLLSGRLSG--RYSPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHheecc--ccCchhHHHHHHHHHHHHH
Confidence 444555555556678888999999999 9999998776655444433
No 170
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=96.62 E-value=0.052 Score=56.29 Aligned_cols=43 Identities=19% Similarity=0.184 Sum_probs=39.4
Q ss_pred HHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 180 ISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 180 ~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
..+.|.+.+|+++.+-+.+-+|+....+.+|+++|+.+.+.+.
T Consensus 410 ~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~ 452 (502)
T TIGR00887 410 NATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLA 452 (502)
T ss_pred CchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhh
Confidence 3478999999999999999999999999999999999988875
No 171
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=96.57 E-value=0.17 Score=50.29 Aligned_cols=118 Identities=13% Similarity=0.133 Sum_probs=67.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCch
Q 017012 61 SKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPK 140 (379)
Q Consensus 61 e~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (379)
+...++.........+..+..+++.| |++||+.+.+....+++.+.++.. . . +
T Consensus 254 ~~~g~~~~~~~i~~~~~~~~~g~l~~--r~g~~~~l~~~~~l~~l~~~~~~~----~-~------------------~-- 306 (396)
T TIGR00882 254 RVFGYVTTMGELLNALIMFCAPLIIN--RIGAKNALLIAGTIMSVRIIGSSF----A-T------------------T-- 306 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HhccchhHHHHHHHHHHHHHHHHh----c-C------------------C--
Confidence 33444444445566777788899999 999999876655444443333221 1 0 0
Q ss_pred hhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHH-HHHHHHHHHHHhHHHHH
Q 017012 141 AAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGF-IGAGATLGQLFGSLFAA 219 (379)
Q Consensus 141 ~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgl-igag~~lG~I~G~~l~~ 219 (379)
.| |.+. ..+.-.+...........++++.++.+-+...++. .+...++|.++|+.+++
T Consensus 307 ------------~~----~~~~-----~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G 365 (396)
T TIGR00882 307 ------------AL----EVVI-----LKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAG 365 (396)
T ss_pred ------------hH----HHHH-----HHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHH
Confidence 23 1111 11101111112222444556666665555555665 67889999999999999
Q ss_pred HHH-HHhH
Q 017012 220 GMA-FLGP 226 (379)
Q Consensus 220 ~la-~~g~ 226 (379)
++. ..|.
T Consensus 366 ~l~~~~G~ 373 (396)
T TIGR00882 366 NMYDSIGF 373 (396)
T ss_pred HHHHhccc
Confidence 987 4564
No 172
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.51 E-value=0.12 Score=54.13 Aligned_cols=156 Identities=15% Similarity=0.223 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHhhhccchhhcccCccch--hHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHH
Q 017012 34 SSCFFFILSAYFVVLPLRDEGAISLGLSKL--PGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFF 111 (379)
Q Consensus 34 ~l~~F~il~~y~ilrpird~l~vs~Gae~l--p~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa 111 (379)
...+.-.+.+-+...--...++.+.|.+.- .|+-.++-.+.++.+.+-.++.| |+|||+++.+......+..+++.
T Consensus 276 ~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid--~~gRRpLll~~~~~~~~~~~~~~ 353 (485)
T KOG0569|consen 276 VVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLID--RLGRRPLLLISLSLMAVALLLMS 353 (485)
T ss_pred HHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCcHHHHHHHHHHHHHHHHHH
Confidence 333445566666666666677777665544 77777777888899999999999 99999999999988888888777
Q ss_pred HHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017012 112 LLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVM 191 (379)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~ 191 (379)
........ .+ .|.. |..+ ...++.+-.++.....+-|-+.++.+
T Consensus 354 ~~~~l~~~-----------~~--------------------~~~~--y~~i---~~~~~~~~~f~~G~gpi~~fi~aELf 397 (485)
T KOG0569|consen 354 IALFLSNS-----------FG--------------------SWLS--YLCI---AAIFLFIISFAIGPGPIPWFIGAELF 397 (485)
T ss_pred HHHHHHHH-----------hh--------------------hHHH--HHHH---HHHHHHHHhhhcCCCchhHHHHHHhC
Confidence 66644311 00 1420 1112 13333455667777889999999999
Q ss_pred CccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhHH
Q 017012 192 DSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGPY 227 (379)
Q Consensus 192 ~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~~ 227 (379)
+...+..-...-++.--+...+=+..--.+. .+|+.
T Consensus 398 ~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~~ 434 (485)
T KOG0569|consen 398 PQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGPY 434 (485)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 9998888777766666555544333322233 45653
No 173
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=96.44 E-value=0.14 Score=58.37 Aligned_cols=50 Identities=12% Similarity=0.042 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 173 ALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 173 ~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
............+++.+.++.++..|.+|+.+...++|..+|+.+++.+.
T Consensus 345 g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 345 AAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred HHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444567889999999999999999999999999999999988876
No 174
>PRK10054 putative transporter; Provisional
Probab=96.41 E-value=0.13 Score=51.64 Aligned_cols=49 Identities=14% Similarity=0.223 Sum_probs=38.0
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhHH-HHHH
Q 017012 182 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGPY-LLLF 231 (379)
Q Consensus 182 lfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~~-lll~ 231 (379)
..+..+.+..+.+...+.|+..+ .+.+|..+||.+++.+. +.|+. .+++
T Consensus 318 ~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~ 368 (395)
T PRK10054 318 GEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVI 368 (395)
T ss_pred hHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHH
Confidence 55688999999888889999765 56689999999999986 66753 4433
No 175
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=96.38 E-value=0.35 Score=49.38 Aligned_cols=167 Identities=14% Similarity=0.103 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhcc---cCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAIS---LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs---~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~ 106 (379)
++...+.-++...+++..-+--.....+ ...+.++++..+.=+.+++-+.+.||++| | +.++.+.......++.
T Consensus 213 v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~d--r-~~~~~l~~~~~l~a~~ 289 (394)
T COG2814 213 VLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLAD--R-GPRRALIAALLLLALA 289 (394)
T ss_pred HHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhcc--c-cchhHHHHHHHHHHHH
Confidence 4444455555554444433333333333 35778899877766788899999999999 9 7788877776666655
Q ss_pred HHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 017012 107 LLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWAR 186 (379)
Q Consensus 107 ~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~ 186 (379)
++.+.+.- . + .|. -. ...++|.- ...-..+-|+.
T Consensus 290 ~l~l~~~~--~--------------------~--------------~~~-----~~---~~~~~wg~--a~~~~~~~~~~ 323 (394)
T COG2814 290 LLALTFTG--A--------------------S--------------PAL-----AL---ALLFLWGF--AFSPALQGLQT 323 (394)
T ss_pred HHHHHHhc--c--------------------h--------------HHH-----HH---HHHHHHHH--HhhhhhhHHHH
Confidence 55543321 1 0 121 11 12222322 22222233333
Q ss_pred HHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHHHH
Q 017012 187 VIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQSSKG 245 (379)
Q Consensus 187 ~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa~ll~l~~~~~~~ 245 (379)
-..-..+|.+.---++..+..|+|--+|..+++... +.|. ....+++++..+++.+...
T Consensus 324 ~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 324 RLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred HhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Confidence 333366788888888999999999999999888875 6675 3666666666666665443
No 176
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=96.32 E-value=0.08 Score=53.50 Aligned_cols=46 Identities=11% Similarity=0.239 Sum_probs=39.7
Q ss_pred HHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHh
Q 017012 180 ISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 225 (379)
Q Consensus 180 ~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g 225 (379)
....|....|.++++++.+.+|+.++.+++|.++||.+.+.+. ..|
T Consensus 351 ~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g 397 (412)
T TIGR02332 351 MAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG 397 (412)
T ss_pred hhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC
Confidence 3467888888999999999999999999999999999988876 444
No 177
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=96.25 E-value=0.85 Score=45.12 Aligned_cols=45 Identities=2% Similarity=0.025 Sum_probs=31.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHH
Q 017012 63 LPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLV 109 (379)
Q Consensus 63 lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~ll 109 (379)
...+.......+++..++.+++.| |++||++..+....+.+..++
T Consensus 241 ~~~~~~~~~~~~i~~~~~~~~l~~--r~g~~~~~~~~~~~~~~~~~~ 285 (392)
T PRK10473 241 YAIIMALTAGVSMTVSFSTPFALG--IFKPRTLMLTSQVLFLAAGIT 285 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHH
Confidence 344444556677788899999999 999999876665554443333
No 178
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.20 E-value=1.1 Score=43.72 Aligned_cols=55 Identities=16% Similarity=0.135 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 167 GFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 167 ~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.+++...+ +...-.....+++|+.+.|++.|..++..+.-++|.++||.+++.+.
T Consensus 16 ~~f~~g~G-~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i 70 (310)
T TIGR01272 16 ALFVLASG-LTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLI 70 (310)
T ss_pred HHHHHHhh-HHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 34444333 34455588899999999999999999999999999999999999875
No 179
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=96.11 E-value=0.52 Score=47.40 Aligned_cols=42 Identities=17% Similarity=0.186 Sum_probs=38.0
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 017012 182 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF 223 (379)
Q Consensus 182 lfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~ 223 (379)
..-..++|..+.++..|.+|+.+...++|..+||.+.+.+.+
T Consensus 317 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~ 358 (400)
T PRK11646 317 ARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFD 358 (400)
T ss_pred cHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHH
Confidence 445788899999999999999999999999999999999873
No 180
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=96.04 E-value=0.27 Score=51.21 Aligned_cols=75 Identities=13% Similarity=0.080 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhcc-c-CccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q 017012 29 ALLHSSSCFFFILSAYFVVLPLRDEGAIS-L-GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (379)
Q Consensus 29 ~~l~~~l~~F~il~~y~ilrpird~l~vs-~-Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~ 106 (379)
+++.+.++.||...+|.-+--.-..+..+ . ..+.+-..+ ...+++.+..|+.|+|+| |++++|+..+.....++.
T Consensus 253 ~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~~~~~l~~~~-l~~l~~~l~rplgG~LAD--RiG~~~vl~~~~i~~~i~ 329 (462)
T PRK15034 253 HLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAF-FGPFIGAIARSVGGAISD--KFGGVRVTLINFIFMAIF 329 (462)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHH-HHHHHHHHHHHhhHHHHH--hcCchHHHHHHHHHHHHH
Confidence 35556666666665554332111111111 2 111122222 234678888899999999 999999988776554433
No 181
>PRK11043 putative transporter; Provisional
Probab=95.95 E-value=1 Score=44.69 Aligned_cols=119 Identities=13% Similarity=0.038 Sum_probs=67.3
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCc
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDP 139 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (379)
.+.....+.....+..+...+.+++.| |+++++........+++..+.+........+ +
T Consensus 237 ~~~~g~~~~~~~~~~~~g~~~~~~l~~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~- 295 (401)
T PRK11043 237 PADIGLSYVPQTIAFLVGGYGCRAALQ--KWGGEQLLPWLLVLFAVSVIAIWLASLLSHP------------------S- 295 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHHHHHhccC------------------c-
Confidence 333444444444555666677789999 9999987765554444443333222111100 0
Q ss_pred hhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHH
Q 017012 140 KAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAA 219 (379)
Q Consensus 140 ~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~ 219 (379)
.| ... +.+......+........+.+.|.. ++++.|..|+++..+..++..|+.+++
T Consensus 296 -------------~~-----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~~~~~~~~~~g 352 (401)
T PRK11043 296 -------------LV-----PLL----IPFCVMAAANGAIYPIVVAQALRPF-PQATGKAAALQNTLQLGLCFLASLLVS 352 (401)
T ss_pred -------------HH-----HHH----HHHHHHHHHHHHHHHHHHHHHhhhC-cccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 110 1111122222333344555555665 468899999999988888888888888
Q ss_pred HHH
Q 017012 220 GMA 222 (379)
Q Consensus 220 ~la 222 (379)
.+.
T Consensus 353 ~l~ 355 (401)
T PRK11043 353 ALI 355 (401)
T ss_pred Hcc
Confidence 775
No 182
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=95.89 E-value=1.4 Score=44.04 Aligned_cols=45 Identities=11% Similarity=-0.071 Sum_probs=34.4
Q ss_pred HHHHHHHHhhcCccc-hhHHHHHHHHHHHHHHHHhHHHHHHHHHHh
Q 017012 181 SSTWARVIDVMDSES-GSRLFGFIGAGATLGQLFGSLFAAGMAFLG 225 (379)
Q Consensus 181 slfW~~~~di~~~~e-akR~fgligag~~lG~I~G~~l~~~la~~g 225 (379)
......+.+..+.|+ ..|.+++.+...++|..+|..+.+.+..+|
T Consensus 312 ~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 357 (393)
T PRK11195 312 VPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLG 357 (393)
T ss_pred hhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcC
Confidence 345555666654443 578999999999999999999988777766
No 183
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=95.74 E-value=1.8 Score=43.46 Aligned_cols=47 Identities=11% Similarity=0.090 Sum_probs=32.9
Q ss_pred HHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHH
Q 017012 186 RVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAA 233 (379)
Q Consensus 186 ~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa 233 (379)
++.+..+ ++..|..+...+..++|..+|+.+++.+. ..|. ..+..++
T Consensus 329 ~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~ 377 (394)
T PRK10213 329 WITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSG 377 (394)
T ss_pred HHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHH
Confidence 4566665 56667778887888899999999999886 5565 3444433
No 184
>TIGR00901 2A0125 AmpG-related permease.
Probab=95.73 E-value=0.29 Score=47.68 Aligned_cols=142 Identities=10% Similarity=-0.019 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhcc--cCccchhHHHHH-HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAIS--LGLSKLPGLFVG-SLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs--~Gae~lp~l~~~-~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~ 106 (379)
++...+..++...+++..-..-...... .+.++.-.+... .....++..++.++++| |++|++.+.+.....++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~--r~g~~~~l~~~~~~~~~~ 288 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQ--PLNILYALLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHH
Confidence 4444444444555554444333333333 234444444432 23456677888899999 999999876655444444
Q ss_pred HHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 017012 107 LLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWAR 186 (379)
Q Consensus 107 ~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~ 186 (379)
+.++.+... . . .|.+ ..++. .| ... ...+..+............+
T Consensus 289 ~~~~~~~~~-~-~-----------~~~~------------~~~~~-~~-----~~~----~~~~l~~~~~~~~~~~~~~~ 333 (356)
T TIGR00901 289 NAGFVWLAS-N-G-----------HHDG------------ITFPH-LL-----MLF----LTITLEAVTGGLGTVAFVAF 333 (356)
T ss_pred HHHHHHHHh-c-C-----------cccc------------cccch-HH-----HHH----HHHHHHHHHhHHHHHHHHHH
Confidence 333332210 1 0 0000 00000 12 111 11111233345566788999
Q ss_pred HHhhcCccchhHHHHHHHHHHH
Q 017012 187 VIDVMDSESGSRLFGFIGAGAT 208 (379)
Q Consensus 187 ~~di~~~~eakR~fgligag~~ 208 (379)
+.+.+++++..|.||+.....+
T Consensus 334 ~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 334 LSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHhcCCCccHHHHHHHHHHHh
Confidence 9999999999999999887654
No 185
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=95.72 E-value=1.3 Score=43.21 Aligned_cols=41 Identities=5% Similarity=0.083 Sum_probs=31.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHH
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRF 102 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~ 102 (379)
.++..++.....+..++..++.+++.| |++||+.+.+....
T Consensus 229 ~~~~g~~~~~~~~~~~~~~~~~g~l~~--r~g~~~~~~~~~~~ 269 (377)
T PRK11102 229 PQNFGYYFALNIVFLFVMTIINSRFVR--RVGALNMLRFGLWI 269 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCHHHHHHHHHHH
Confidence 444555555666778888999999999 99999987765544
No 186
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.70 E-value=0.19 Score=54.91 Aligned_cols=177 Identities=16% Similarity=0.188 Sum_probs=104.4
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-------------------HHhH-HH-HHHHHHHHHHHHHH
Q 017012 184 WARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-------------------FLGP-YL-LLFAACLMELAAQS 242 (379)
Q Consensus 184 W~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-------------------~~g~-~l-ll~aa~ll~l~~~~ 242 (379)
=+|+.|-.+.++...+.|++.+...+|=++|=.+++++. ++|. |+ +++++.++.++.+-
T Consensus 259 isYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p 338 (735)
T KOG3626|consen 259 ISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVP 338 (735)
T ss_pred CccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 367999999999999999999999998888888888763 1454 33 55555555555554
Q ss_pred HHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHHHHHHHH
Q 017012 243 SKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSA 322 (379)
Q Consensus 243 ~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~~v~l~~ 322 (379)
...+-|..++.. ++.+..+ .+..+++. +.++.....+++. ..+..+++.++++|-.+...+.-++..
T Consensus 339 ~f~fPk~lp~~~---~~~~~~~--~~~~k~~~-------~~~~~~~~~~~~i-kdfp~s~~~ll~N~if~~~~l~~~~~~ 405 (735)
T KOG3626|consen 339 LFFFPKELPKSQ---KRKRARD--LHVLKTES-------GGAKSDKTFGKKI-KDFPKSIKRLLSNPIFMLVVLASVIES 405 (735)
T ss_pred HHhCcccCcccc---ccchhhh--hccccccc-------ccccCCcchhhhH-HHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 444433333210 0000000 00000000 0001110111111 157788899999998776655555544
Q ss_pred H-HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 323 V-VSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 323 ~-~~~lv~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
. ..-+.-|.- .+++.+|..++.++ ..+...+++-...+-.++.|.+++||-
T Consensus 406 ~~~~G~~tFlP-KyLE~Qfg~sas~A---n~l~G~i~vp~~~~Gi~lGG~iikkfk 457 (735)
T KOG3626|consen 406 LAITGYITFLP-KYLETQFGISASLA---NILTGSIGVPAAAVGIFLGGLIIKKFK 457 (735)
T ss_pred HHHhhHHHhhH-HHHHHHcCCCHHHH---HHHhhhhhhhhhhhhhhccceeeeeec
Confidence 3 344444543 44588887766655 444557778888888888999999874
No 187
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=95.65 E-value=0.46 Score=48.18 Aligned_cols=43 Identities=19% Similarity=0.243 Sum_probs=34.7
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHHHHH-HHhHHHHHHHH-HHhH
Q 017012 184 WARVIDVMDSESGSRLFGFIGAGATLGQ-LFGSLFAAGMA-FLGP 226 (379)
Q Consensus 184 W~~~~di~~~~eakR~fgligag~~lG~-I~G~~l~~~la-~~g~ 226 (379)
+..+.|.++.+++.+..|+.+..+++|+ .+||.+.+.+. +.|.
T Consensus 367 ~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~ 411 (438)
T TIGR00712 367 GLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW 411 (438)
T ss_pred HHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccc
Confidence 4567899999999999999998888875 57999988876 4553
No 188
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=95.59 E-value=0.52 Score=48.86 Aligned_cols=42 Identities=10% Similarity=0.044 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHH
Q 017012 179 TISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAG 220 (379)
Q Consensus 179 ~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~ 220 (379)
........+.+..+.+++.+..++.+...++|..+|+.+.+.
T Consensus 368 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~ 409 (495)
T PRK14995 368 ALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGL 409 (495)
T ss_pred HHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 334566667788899999999999999999999999888654
No 189
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=95.57 E-value=0.045 Score=53.21 Aligned_cols=101 Identities=19% Similarity=0.183 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhcc
Q 017012 66 LFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQ 145 (379)
Q Consensus 66 l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (379)
+.......+++..++.++++| |++||+.....+...+....++.+.. ... .+
T Consensus 266 ~~~~~~~~~~~~~~~~g~l~~--r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~-----------------~~------- 317 (366)
T TIGR00886 266 YASLGGLLGSLARPLGGAISD--RLGGARKLLMSFLGVAMGAFLVVLGL--VSP-----------------LS------- 317 (366)
T ss_pred HHHHHHHHHHHHhhccchHHH--hhccchhHHHHHHHHHHHHHHHHhcC--CCc-----------------ch-------
Confidence 333445567788889999999 99999877665544333333222211 100 00
Q ss_pred CCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHH
Q 017012 146 GSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQ 211 (379)
Q Consensus 146 ~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~ 211 (379)
.| ... ..++.............|+.++|+.+ +++.+.+|+++..+++|+
T Consensus 318 -------~~-----~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 318 -------LA-----VFI----VLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLGG 366 (366)
T ss_pred -------HH-----HHH----HHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCCC
Confidence 11 111 11122222233345578899999986 799999999999988874
No 190
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.30 E-value=1.2 Score=46.74 Aligned_cols=102 Identities=16% Similarity=0.158 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCC
Q 017012 71 LILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTAN 150 (379)
Q Consensus 71 ~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (379)
++..++-+..-++++| |+|||..+++......+.-+++.+......
T Consensus 70 ~iG~~~Gs~~~~~la~--~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~-------------------------------- 115 (485)
T KOG0569|consen 70 FIGGMIGSFSSGLLAD--RFGRKNALLLSNLLAVLAALLMGLSKSAPS-------------------------------- 115 (485)
T ss_pred HHHHHHHHHHHHHHHH--hhcchHHHHHHHHHHHHHHHHHHHHHHhhh--------------------------------
Confidence 4466666777789999 999998777665555444444444332220
Q ss_pred CCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHH
Q 017012 151 SADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLF 217 (379)
Q Consensus 151 ~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l 217 (379)
.. .++ ++|... ++........-=-|..++-+.+-+-..=.+...+.++|.++|..+
T Consensus 116 --~e-----~li-~GR~i~---Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~ 171 (485)
T KOG0569|consen 116 --FE-----MLI-LGRLIV---GLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVL 171 (485)
T ss_pred --HH-----HHH-HHHHHH---HHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 11 222 446642 333333334444458888887766555555555555555555433
No 191
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=95.18 E-value=0.51 Score=48.48 Aligned_cols=119 Identities=16% Similarity=0.240 Sum_probs=78.2
Q ss_pred cCccchhHH--HHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCc
Q 017012 58 LGLSKLPGL--FVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNA 135 (379)
Q Consensus 58 ~Gae~lp~l--~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~ 135 (379)
.|-++.-.+ -+.+-+++++.+.++++|.+ |++-++++.+.+.-.. +....... . . .
T Consensus 283 ~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~--rfg~k~vl~~~lvi~~--~~~~~~~~--~-~-------------~-- 340 (438)
T COG2270 283 LGLSSTELLLIGIALSVVAALGAIIAGFLDE--RFGSKPVLMIGLVILS--IAALYLIF--L-E-------------G-- 340 (438)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCCceeehHHHHHHH--HHHHHHHH--c-c-------------c--
Confidence 344444433 23456688899999999999 9999998877653321 11111111 1 0 0
Q ss_pred cCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhH
Q 017012 136 KEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGS 215 (379)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~ 215 (379)
+.| -| .+. +++..+-.-.-+.-=++.+...+++|..|+||+.+.-|..+.++||
T Consensus 341 ~~~--------------f~-----i~g-------ll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp 394 (438)
T COG2270 341 ELD--------------FW-----ILG-------LLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGP 394 (438)
T ss_pred cHH--------------HH-----HHH-------HHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHH
Confidence 000 23 222 1234333334456667889999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 017012 216 LFAAGMAFL 224 (379)
Q Consensus 216 ~l~~~la~~ 224 (379)
.+.+.+..+
T Consensus 395 ~lv~v~t~i 403 (438)
T COG2270 395 FLVAVITQI 403 (438)
T ss_pred HHHHHHHHH
Confidence 999988754
No 192
>PRK11462 putative transporter; Provisional
Probab=95.10 E-value=0.84 Score=47.08 Aligned_cols=108 Identities=19% Similarity=0.257 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccC
Q 017012 67 FVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQG 146 (379)
Q Consensus 67 ~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (379)
.....+.+++.+++.++++| |+++|+++.......++..+++. +.+. . .
T Consensus 269 l~~~~i~~iig~~l~~~l~~--r~gkk~~~~~~~~~~~~~~~~~~--~~~~-~-------------------------~- 317 (460)
T PRK11462 269 LTTYCVGNLIGSALAKPLTD--WKCKVTIFWWTNALLAVISLAMF--FVPM-Q-------------------------A- 317 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHH--HhChHHHHHHHHHHHHHHHHHHH--Hhch-h-------------------------H-
Confidence 33445567778899999999 99999887654433222222211 1111 0 0
Q ss_pred CCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccc---hhHH----HHHHHHHHHHHHHHhHHHHH
Q 017012 147 STANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSES---GSRL----FGFIGAGATLGQLFGSLFAA 219 (379)
Q Consensus 147 ~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~e---akR~----fgligag~~lG~I~G~~l~~ 219 (379)
.+. .+. ...++ .........+.|+.++|+.+.+| ++|. |+..+....+|.-+|+.+++
T Consensus 318 ------~~~----~~~----~~~l~-g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g 382 (460)
T PRK11462 318 ------SIT----MFV----FIFVI-GVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIG 382 (460)
T ss_pred ------HHH----HHH----HHHHH-HHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 110 111 12222 22334455688999999999776 3443 55555666666666666655
Q ss_pred H
Q 017012 220 G 220 (379)
Q Consensus 220 ~ 220 (379)
.
T Consensus 383 ~ 383 (460)
T PRK11462 383 W 383 (460)
T ss_pred H
Confidence 4
No 193
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=95.01 E-value=0.9 Score=47.03 Aligned_cols=129 Identities=11% Similarity=0.038 Sum_probs=80.0
Q ss_pred cCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHH-hhhcccchhhhchhccccCCcc
Q 017012 58 LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLW-QSSSIGYLSKLESLDAVSSNAK 136 (379)
Q Consensus 58 ~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~-~~~~~~~~~~~~~~~~~~~~~~ 136 (379)
.+.+.+-.+.....+..++...+++++.+ |++.|+++.+.....++..+...... ..+ .
T Consensus 285 ~s~~~~G~~~~~~~v~~i~g~~~~~~~~~--~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~-~----------------- 344 (468)
T TIGR00788 285 GGPSFSGMSKVVGNLGSLCGVGGYDRFLK--TFPYRLLFGVTTLLYTLSSLFDLILVKRWN-L----------------- 344 (468)
T ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHh--hCCHHHHHHHHHHHHHHHHhCceeeeeccc-c-----------------
Confidence 34555555555556788899999999998 99999988776655443332221111 000 0
Q ss_pred CCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHH
Q 017012 137 EDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSL 216 (379)
Q Consensus 137 ~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~ 216 (379)
....+. .|. ..+. .++ -+....+.....-.++.+..+.++....|++.+...++|.++|+.
T Consensus 345 --------~~gi~~--~~~-----~~~~-~~l---~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~ 405 (468)
T TIGR00788 345 --------AFGISD--EVF-----VLGD-SII---AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGF 405 (468)
T ss_pred --------ccCCCC--eee-----eeeh-hHH---HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHH
Confidence 000011 111 1100 011 122222333345778999999999999999999999999999999
Q ss_pred HHHHHH-HHh
Q 017012 217 FAAGMA-FLG 225 (379)
Q Consensus 217 l~~~la-~~g 225 (379)
+++.+. .+|
T Consensus 406 ~gg~l~~~~g 415 (468)
T TIGR00788 406 LGVLLMETIG 415 (468)
T ss_pred HHHHHHHHcC
Confidence 999887 444
No 194
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=95.00 E-value=1.4 Score=45.68 Aligned_cols=55 Identities=16% Similarity=0.222 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 168 FFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 168 Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.|+..++=-.+.....++++++..+.+.+.|.+|+...+..+|..+|+.+.....
T Consensus 387 ~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~ 441 (475)
T TIGR00924 387 IYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGA 441 (475)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333345566799999999999999999999999999999999998887665
No 195
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=94.90 E-value=0.83 Score=46.54 Aligned_cols=42 Identities=17% Similarity=0.243 Sum_probs=31.1
Q ss_pred HHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 180 ISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 180 ~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
....|....|..+ +.+....|+.+.++++|++++|.+++.+.
T Consensus 379 ~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~ 420 (465)
T TIGR00894 379 LAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNIL 420 (465)
T ss_pred hhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheee
Confidence 3456666667664 46777788888888888888888888765
No 196
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=94.86 E-value=3.3 Score=42.23 Aligned_cols=108 Identities=19% Similarity=0.122 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCC
Q 017012 71 LILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTAN 150 (379)
Q Consensus 71 ~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (379)
.+.=+++-...+++.. |++-++++.+...++++-+.+++..- ||
T Consensus 253 ~~aEi~~f~~~~~~~~--r~g~~~ll~~a~~~~~vR~~l~a~~~-----------------------~~----------- 296 (400)
T PF03825_consen 253 VVAEIPFFFFSGRFLK--RFGIKWLLLLALVAYAVRWLLYAYFS-----------------------DP----------- 296 (400)
T ss_pred HHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHHhc-----------------------CC-----------
Confidence 3444455566688888 99999999998888777777776531 10
Q ss_pred CCccccccchhhhhhHHHHHHHHHHHHHHHHHHH----HHHHhhcCccchhHHHHHHHH-HHHHHHHHhHHHHHHHH-HH
Q 017012 151 SADWGDHGWFYVSVRMGFFLWVALLNLITISSTW----ARVIDVMDSESGSRLFGFIGA-GATLGQLFGSLFAAGMA-FL 224 (379)
Q Consensus 151 ~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW----~~~~di~~~~eakR~fgliga-g~~lG~I~G~~l~~~la-~~ 224 (379)
.|. .+. +- +...+.-.++...+| .++++..+.+.+.+-=++.++ ..++|..+|+.++|.+- ++
T Consensus 297 --~~~----~~~----~~-~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~ 365 (400)
T PF03825_consen 297 --WPF----IVA----LQ-LLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAF 365 (400)
T ss_pred --cHH----HHH----HH-HHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 120 000 00 000111122223444 679999998888887777665 35677888887777775 44
Q ss_pred h
Q 017012 225 G 225 (379)
Q Consensus 225 g 225 (379)
|
T Consensus 366 g 366 (400)
T PF03825_consen 366 G 366 (400)
T ss_pred c
Confidence 4
No 197
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=94.70 E-value=3.6 Score=40.63 Aligned_cols=43 Identities=9% Similarity=0.121 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 179 TISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 179 ~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.....++.+.|.++ ++..+..++++.+.++|+.+|+.+++.+.
T Consensus 316 ~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 316 LFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 44566677778876 45566789999999999999998887765
No 198
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=94.69 E-value=0.55 Score=48.78 Aligned_cols=104 Identities=10% Similarity=0.129 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCC
Q 017012 71 LILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTAN 150 (379)
Q Consensus 71 ~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (379)
++..++-+.++|.++| |+|||+++...+..++++-++.++ . + |
T Consensus 128 ~~G~~vG~~i~g~lsD--~~GRk~~~~~~~~~~~i~~~~~a~----a-~------------------~------------ 170 (521)
T KOG0255|consen 128 FLGVLVGSLIFGPLSD--RFGRKPVLLVSLLLFIIFGILTAF----A-P------------------N------------ 170 (521)
T ss_pred HHHHHHHHhhheehHh--hcccHHHHHHHHHHHHHHHHHHHH----h-C------------------c------------
Confidence 4566677778899999 999999999888776544433333 2 1 0
Q ss_pred CCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 017012 151 SADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF 223 (379)
Q Consensus 151 ~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~ 223 (379)
.| .|.. -|.+ .+.......+.-+.++.|+++++++.+.-.+ ....-.|+++++..++++..
T Consensus 171 --~~-----~~~~-~Rfl---~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~ 231 (521)
T KOG0255|consen 171 --YW-----MFLI-FRFL---SGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR 231 (521)
T ss_pred --HH-----HHHH-HHHH---HHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 12 3331 1332 4555666777899999999999999998888 77777888888877777654
No 199
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=94.35 E-value=4.2 Score=42.69 Aligned_cols=60 Identities=17% Similarity=0.123 Sum_probs=44.9
Q ss_pred HHHHhhcCccchhH--HHHHHHHHHHHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHHH
Q 017012 185 ARVIDVMDSESGSR--LFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQSSK 244 (379)
Q Consensus 185 ~~~~di~~~~eakR--~fgligag~~lG~I~G~~l~~~la-~~g~-~lll~aa~ll~l~~~~~~ 244 (379)
++..|.++.+|.+| -|+++-+|.|+|++++|.++++++ ++|- .-+-.+++-+.++.+...
T Consensus 140 ~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~ 203 (498)
T COG3104 140 SLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFL 203 (498)
T ss_pred HHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 34889999888776 499999999999999999999998 5664 244455555555555433
No 200
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.11 E-value=8.1 Score=39.79 Aligned_cols=187 Identities=16% Similarity=0.109 Sum_probs=100.4
Q ss_pred HHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHh---H-HHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 017012 180 ISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFLG---P-YLLLFAACLMELAAQSSKGIYKEIPRRPE 255 (379)
Q Consensus 180 ~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~~g---~-~lll~aa~ll~l~~~~~~~l~~~~~~~~~ 255 (379)
-..+.+++-..-++++-+|.-+..-++.-+|-.+|+.++..+...+ . .+..++.....++.+....|-+...+.--
T Consensus 111 evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f 190 (412)
T PF01770_consen 111 EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKRSLFF 190 (412)
T ss_pred HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccce
Confidence 3378889999999999999999999999999999999988776543 2 25556555555566655555321111000
Q ss_pred CCCC-CCCCCCCCCCC--CCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHhchhHHHHHH----HHHHHHHHHHHH
Q 017012 256 ELPP-LRKADSDPRSG--ADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSL----FLWLSAVVSSFF 328 (379)
Q Consensus 256 ~~~p-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~S~yL~~i~~----~v~l~~~~~~lv 328 (379)
+.++ .+....+++.+ ++..+++......++......+..-..++.-++...++|.++...+ -.+.|..+.|.+
T Consensus 191 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYv 270 (412)
T PF01770_consen 191 HRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYV 270 (412)
T ss_pred eccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHH
Confidence 0000 00000000000 0000000000000000000000001145666777889999866554 445566677777
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 017012 329 YFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTS 372 (379)
Q Consensus 329 ~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~l 372 (379)
...|++. ++++....+-|.++.+..++..+..+. .|.+
T Consensus 271 Q~LW~~v-----~~~~~~~vYNG~VeA~~tllgA~~al~-~g~v 308 (412)
T PF01770_consen 271 QSLWDTV-----PPSDNESVYNGAVEAASTLLGAIAALL-AGYV 308 (412)
T ss_pred HHHHHhc-----CCCCCCcccchHHHHHHHHHHHHHHHH-HhHh
Confidence 7776666 444455566688887777777665443 3555
No 201
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.10 E-value=3.8 Score=42.70 Aligned_cols=167 Identities=11% Similarity=0.103 Sum_probs=90.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccchhhcccCccc--hhHHHHHHHHHHHHHHHHHHHhhc--CCCCCchhHHHHHHHHH
Q 017012 28 SALLHSSSCFFFILSAYFVVLPLRDEGAISLGLSK--LPGLFVGSLILTLIAAPVSTLIFS--LPNLSKAKALVLIHRFF 103 (379)
Q Consensus 28 ~~~l~~~l~~F~il~~y~ilrpird~l~vs~Gae~--lp~l~~~~~~~~ll~~~iy~~L~~--~~r~~r~rv~~~~~~~f 103 (379)
.+++......+-+-++|.+=-..-.....+.|.++ -...+.++-+..+++.|+.|..|| ..|++|||=+..+..+.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 56666666666677776665555555555555443 223345667788999999999999 44999999887766554
Q ss_pred HHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHH
Q 017012 104 SVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISST 183 (379)
Q Consensus 104 ~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slf 183 (379)
. .+-+| ++.+.. |+-|.= -+|++. |- ..| --+ +..+=+...++-|.+.--=.
T Consensus 112 i-~~~l~-Lig~aa-----------Dig~~l-gd~~~~-------~~-~~r-----ai~-~~~lg~~LLD~A~n~~qgp~ 163 (498)
T KOG0637|consen 112 I-AVSLF-LIGYAA-----------DIGLLL-GDNERK-------PV-KPR-----AIV-LFILGFWLLDVANNTLQGPC 163 (498)
T ss_pred H-HHHHh-hhhhHh-----------hhhHHh-cCCccc-------cc-chH-----HHH-HHHHHhHHHHhhhhhhhhhH
Confidence 2 22222 111111 222210 001000 00 011 100 00011111233344444456
Q ss_pred HHHHHhhcCccchhH-HHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 184 WARVIDVMDSESGSR-LFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 184 W~~~~di~~~~eakR-~fgligag~~lG~I~G~~l~~~la 222 (379)
=++..|....+|-++ -.+..+....+|.++|=.+++++.
T Consensus 164 ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~ 203 (498)
T KOG0637|consen 164 RALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLG 203 (498)
T ss_pred HHHHHHhccChhhhhccchhHHHHHHhcceeeeecccccC
Confidence 678899998888777 666666666777777766655543
No 202
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=94.02 E-value=0.88 Score=47.49 Aligned_cols=106 Identities=13% Similarity=0.018 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhh
Q 017012 64 PGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAV 143 (379)
Q Consensus 64 p~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (379)
.|+-....+.+.+..++.|+++| ++|||+.+.....+|.+..++.++.. +
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d--~~GRk~~l~~~~~~~~iG~ii~~~a~--~-------------------------- 141 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGD--RIGRKKTLLLAVVLFLIGAIIIALAP--S-------------------------- 141 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHHHHHHhh--h--------------------------
Confidence 45555567788999999999999 99999999998888877776666632 1
Q ss_pred ccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHH
Q 017012 144 DQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLF 217 (379)
Q Consensus 144 ~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l 217 (379)
.+ |++ ++|+++=..-+. ...+.=-+.+|+.+.+.+.++-.+.....++|..+|-.+
T Consensus 142 ---------~~----~l~--~GR~l~G~g~G~---~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~ 197 (513)
T KOG0254|consen 142 ---------WY----QLI--VGRILTGLGVGG---ASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCI 197 (513)
T ss_pred ---------HH----HHH--HHHHHhccchhh---hhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 12 133 347764322222 223566679999999999999999999999888888444
No 203
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=92.99 E-value=1.8 Score=45.69 Aligned_cols=149 Identities=17% Similarity=0.089 Sum_probs=86.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccchhhcccCccchh--HHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHH
Q 017012 28 SALLHSSSCFFFILSAYFVVLPLRDEGAISLGLSKLP--GLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSV 105 (379)
Q Consensus 28 ~~~l~~~l~~F~il~~y~ilrpird~l~vs~Gae~lp--~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~ 105 (379)
+.++..++-..+..++|.+---.-.....+.|.++-- ++...........-++.|++.| +...++......+..+.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD--~~~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLAD--KPGIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcC--ccccchHHHHHHHHHHH
Confidence 5566666666666666666544444444455555433 3444556788899999999999 66643333222222221
Q ss_pred HHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Q 017012 106 SLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWA 185 (379)
Q Consensus 106 ~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~ 185 (379)
.+.. .+.+... + .| .++ .+-++.+.......++.=.
T Consensus 376 gl~~---~~~p~~~-------------------------~-------~~-----~l~----~~~~~fG~~~g~~~~l~~~ 411 (509)
T KOG2504|consen 376 GLAR---LFLPFAT-------------------------T-------YV-----GLI----VFSILFGFCVGSFSSLTPV 411 (509)
T ss_pred HHHH---HHHHHhc-------------------------c-------HH-----HHH----HHHHHHHHHHHHHHHHHHH
Confidence 1111 1111100 0 11 111 1111112211122223335
Q ss_pred HHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 186 RVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 186 ~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.+.|+...|+-.+.||+.....+++.++||.+++.+.
T Consensus 412 i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~ 448 (509)
T KOG2504|consen 412 ILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLY 448 (509)
T ss_pred HHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeee
Confidence 7899999999999999999999999999999988765
No 204
>PF12832 MFS_1_like: MFS_1 like family
Probab=92.45 E-value=0.5 Score=36.85 Aligned_cols=71 Identities=21% Similarity=0.274 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhccc--CccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHH
Q 017012 30 LLHSSSCFFFILSAYFVVLPLRDEGAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRF 102 (379)
Q Consensus 30 ~l~~~l~~F~il~~y~ilrpird~l~vs~--Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~ 102 (379)
++++-...|+..+++..+.|--.--.-+. +.+++-.+......+.++..|+.|+++| |++|+|.+......
T Consensus 2 l~~lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laD--k~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 2 LLPLKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLAD--KFGKRKVILLGSLF 74 (77)
T ss_pred chHHHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCccHHHHHHHHH
Confidence 34566777888888888888766555553 4555555555556789999999999999 99999988776544
No 205
>PRK10133 L-fucose transporter; Provisional
Probab=92.26 E-value=8.8 Score=39.21 Aligned_cols=112 Identities=12% Similarity=0.063 Sum_probs=65.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhh
Q 017012 63 LPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAA 142 (379)
Q Consensus 63 lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (379)
..+.+......+++..++.+++.| |+++||++.......++..++ ..+.+.
T Consensus 297 ag~~~~~~~~~~~vG~~~~g~l~~--r~g~~~~l~~~~~~~~~~~~~--~~~~~~------------------------- 347 (438)
T PRK10133 297 AANYLTGTMVCFFIGRFTGTWLIS--RFAPHKVLAAYALIAMALCLI--SAFAGG------------------------- 347 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHH--HHHcCC-------------------------
Confidence 344445556677788889999999 999999876654333222211 111100
Q ss_pred hccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 143 VDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 143 ~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.+ .. ..+...............+.+.+.++. +++.-=+++.. ...|+.++|.+.+.++
T Consensus 348 ----------~~-----~~-----~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~ 405 (438)
T PRK10133 348 ----------HV-----GL-----IALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVS 405 (438)
T ss_pred ----------hH-----HH-----HHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHH
Confidence 01 11 122223444566777888888888754 45555566653 4456677777777776
Q ss_pred -HHh
Q 017012 223 -FLG 225 (379)
Q Consensus 223 -~~g 225 (379)
..|
T Consensus 406 ~~~g 409 (438)
T PRK10133 406 DAAG 409 (438)
T ss_pred Hhcc
Confidence 455
No 206
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=92.15 E-value=16 Score=37.77 Aligned_cols=113 Identities=10% Similarity=0.003 Sum_probs=68.8
Q ss_pred HHHHhhhccchhhcc-cCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 017012 43 AYFVVLPLRDEGAIS-LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGY 121 (379)
Q Consensus 43 ~y~ilrpird~l~vs-~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~ 121 (379)
.-|+-+-+.|..+-. .+....-+......+...+.+|+.|.++| ..++||-+..+ |...=..+.+.+...++|
T Consensus 39 ply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD--~~g~Rk~~~~~---f~~i~i~~~~~L~~i~~~- 112 (438)
T COG2270 39 PLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIAD--YPGPRKKFFGF---FTAIGIISTFLLWFIPPG- 112 (438)
T ss_pred HHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhc--cCCCcchHHHH---HHHHHHHHHHHHHHhCCC-
Confidence 344444455544433 23333444455556678899999999999 88888866333 322223333333222110
Q ss_pred hhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHH
Q 017012 122 LSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRL 199 (379)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~ 199 (379)
+ .| +.. .+||+..++-........=+++-|+++.++.+|.
T Consensus 113 ----------------s--------------~~-----~~~---l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~ri 152 (438)
T COG2270 113 ----------------S--------------YL-----LLL---LLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRI 152 (438)
T ss_pred ----------------c--------------hH-----HHH---HHHHHHHHHhcchhheehhhHhhhhcCccccCcc
Confidence 0 23 332 3788888876666677888899999999999996
No 207
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=91.90 E-value=11 Score=36.54 Aligned_cols=52 Identities=21% Similarity=0.330 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH
Q 017012 173 ALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 173 ~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~ 226 (379)
............+.+.+.++. +.++--++. ..+.+|+.++|.+.|.++ ..|.
T Consensus 241 g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~ 293 (310)
T TIGR01272 241 GLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGI 293 (310)
T ss_pred HHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccc
Confidence 333444555666677776653 455555665 567799999999999887 4564
No 208
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=91.68 E-value=3.2 Score=42.60 Aligned_cols=76 Identities=12% Similarity=0.173 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhcc-cCccchh-HHHH-HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHH
Q 017012 29 ALLHSSSCFFFILSAYFVVLPLRDEGAIS-LGLSKLP-GLFV-GSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSV 105 (379)
Q Consensus 29 ~~l~~~l~~F~il~~y~ilrpird~l~vs-~Gae~lp-~l~~-~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~ 105 (379)
.++.+.++.+....++-=+-..-.-..++ .|.+... -.+. .......++=|+-|+|+| |++.+|+....+...++
T Consensus 219 ~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsD--R~Gg~rv~~~~f~~~~~ 296 (417)
T COG2223 219 DTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSD--RIGGRRVTLAVFVGMAL 296 (417)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhh--hccchhHHHHHHHHHHH
Confidence 34555555554444433222222222333 4444333 1233 223467788899999999 99999999888776643
Q ss_pred H
Q 017012 106 S 106 (379)
Q Consensus 106 ~ 106 (379)
.
T Consensus 297 ~ 297 (417)
T COG2223 297 A 297 (417)
T ss_pred H
Confidence 3
No 209
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=90.55 E-value=12 Score=33.35 Aligned_cols=47 Identities=15% Similarity=0.152 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHhhcCc-cchhHHHHHHHH-HHHHHHHHhHHHHHHHH
Q 017012 176 NLITISSTWARVIDVMDS-ESGSRLFGFIGA-GATLGQLFGSLFAAGMA 222 (379)
Q Consensus 176 ~~~~~slfW~~~~di~~~-~eakR~fgliga-g~~lG~I~G~~l~~~la 222 (379)
.........++++|.++. ++..+.++.... ...+|.++|+.+++.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 108 GGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred hHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 335666888999999887 677778888888 58888888887766665
No 210
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=90.12 E-value=26 Score=36.52 Aligned_cols=53 Identities=11% Similarity=-0.026 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHH
Q 017012 168 FFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAG 220 (379)
Q Consensus 168 Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~ 220 (379)
.|+...+=..+....-=+++.+..+.+.+.|..|+...+..+|..+|+.+.+.
T Consensus 388 ~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~ 440 (500)
T PRK09584 388 SYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANL 440 (500)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34333333344445666779999999999999999998888999998888754
No 211
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=89.89 E-value=26 Score=36.11 Aligned_cols=149 Identities=12% Similarity=0.081 Sum_probs=91.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccchhhc----c--cCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHH
Q 017012 28 SALLHSSSCFFFILSAYFVVLPLRDEGAI----S--LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHR 101 (379)
Q Consensus 28 ~~~l~~~l~~F~il~~y~ilrpird~l~v----s--~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~ 101 (379)
++++...++...+.+.|.+...-=..-+. + .|.+..-++......+=++..-+-.++.| |.|-|+.+.+...
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~--rig~k~~Lllag~ 297 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLIN--RIGAKNLLLLAGV 297 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-HHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHH--hcChHhHHHHHHH
Confidence 35555555566666778776532111111 2 35666777766555555566666678888 9999999988776
Q ss_pred HHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHH--HHHH
Q 017012 102 FFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALL--NLIT 179 (379)
Q Consensus 102 ~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~--~~~~ 179 (379)
...+-.+++++.. | .|. +. +..+ .+.. ....
T Consensus 298 i~~iRi~~~~~~~-----------------------~--------------~~~----i~--~~kl----LH~~e~~l~l 330 (412)
T PF01306_consen 298 IMAIRIIGSGFAT-----------------------N--------------PWV----IS--LIKL----LHALEFPLLL 330 (412)
T ss_dssp HHHHHHHHHHT-------------------------S--------------HHH----HH--HHHH----HHHHHHHHHH
T ss_pred HHHHHHHHHhhhc-----------------------c--------------hHH----HH--HHHH----HHHHHHHHHH
Confidence 6655555555422 1 121 10 1111 2222 2222
Q ss_pred HHHHHHHHHhhcCccchhHHHHH-HHHHHHHHHHHhHHHHHHHH-HHhH
Q 017012 180 ISSTWARVIDVMDSESGSRLFGF-IGAGATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 180 ~slfW~~~~di~~~~eakR~fgl-igag~~lG~I~G~~l~~~la-~~g~ 226 (379)
+ -.--|+++.+|.|-....|.+ ...+.++|.++.+.++|.+- ++|.
T Consensus 331 v-a~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~ 378 (412)
T PF01306_consen 331 V-AAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGF 378 (412)
T ss_dssp H-HHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCc
Confidence 2 344789999999999999988 46889999999999999886 7774
No 212
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=88.87 E-value=13 Score=38.16 Aligned_cols=31 Identities=29% Similarity=0.513 Sum_probs=21.5
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhH
Q 017012 196 GSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 226 (379)
Q Consensus 196 akR~fgligag~~lG~I~G~~l~~~la-~~g~ 226 (379)
+.+.=..+...-++|.++|..+.|.+. ..++
T Consensus 122 ~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~ 153 (433)
T PF03092_consen 122 RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGP 153 (433)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCC
Confidence 445666677777788888888877776 3444
No 213
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=88.77 E-value=28 Score=35.01 Aligned_cols=37 Identities=8% Similarity=0.049 Sum_probs=22.2
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHH
Q 017012 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVL 98 (379)
Q Consensus 60 ae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~ 98 (379)
.+...+.........++.+.+.+++.+ |..++|....
T Consensus 253 ~~~~gl~~~~~~~~~~i~~~l~~~~~~--~~~~~~~~~~ 289 (413)
T PRK15403 253 TSQFAWTQVPVFGAVIVANAIVARFVK--DPTEPRFIWR 289 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCchhHHHH
Confidence 444445444445566666788888876 6666665433
No 214
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=88.76 E-value=0.00047 Score=69.76 Aligned_cols=112 Identities=12% Similarity=0.069 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhc
Q 017012 65 GLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVD 144 (379)
Q Consensus 65 ~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (379)
++....++.+++-+++.|.++| |+|||+.+.+......+.-++.++.-..
T Consensus 50 ~~~~~~~~g~~~G~~~~g~~~d--~~GRk~~~~~~~~~~~i~~~~~~~~~~~---------------------------- 99 (451)
T PF00083_consen 50 LLTSSFFIGAIVGALIFGFLAD--RYGRKPALIISALLMIIGSILIAFAPSY---------------------------- 99 (451)
T ss_pred HHHHHHHhhhcccccccccccc--cccccccccccccccccccccccccccc----------------------------
Confidence 3344556778888899999999 9999999877665554433333331100
Q ss_pred cCCCCCCCccccccchhhhhhHHHHHHHHHH-HHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 145 QGSTANSADWGDHGWFYVSVRMGFFLWVALL-NLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 145 ~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~-~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.+ .| .+. +.|.+ .++ ........+.++.|+.+++.+.+.-.+...+..+|.++|..++..+.
T Consensus 100 ----~~--~~-----~~~-~~R~~----~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~ 162 (451)
T PF00083_consen 100 ----NN--FW-----MLL-IGRFL----IGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVS 162 (451)
T ss_pred ----cc--cc-----ccc-ccccc----ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00 12 111 12332 222 23344578888999999999999999999999999999887765554
No 215
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=88.09 E-value=21 Score=35.65 Aligned_cols=145 Identities=21% Similarity=0.232 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHHHHHhh----hccchhhcc-cCccchhH--HHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHH
Q 017012 29 ALLHSSSCFFFILSAYFVVL----PLRDEGAIS-LGLSKLPG--LFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHR 101 (379)
Q Consensus 29 ~~l~~~l~~F~il~~y~ilr----pird~l~vs-~Gae~lp~--l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~ 101 (379)
.+-|-+.+.+.+.+.||+.- .+..-++.. .|-+.-.- +.......+.+..|++|.++| ++|++-....+
T Consensus 261 ~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~D--k~G~n~~wv~~-- 336 (459)
T KOG4686|consen 261 TFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISD--KYGFNLWWVAS-- 336 (459)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHh--hhcceehhHHH--
Confidence 34555566666666666642 333344444 44332221 222335567888999999999 99997543221
Q ss_pred HHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHH
Q 017012 102 FFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITIS 181 (379)
Q Consensus 102 ~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~s 181 (379)
..+..++.=..+.. . .++ .| ++ +.| ..+-.....-
T Consensus 337 a~~~tl~~H~~l~F-t------------~ls--------------------Py-------~~--m~~---lGLsysllAc 371 (459)
T KOG4686|consen 337 ACILTLLGHSGLFF-T------------FLS--------------------PY-------TS--MTF---LGLSYSLLAC 371 (459)
T ss_pred HHHHHHHHhhhHHh-h------------hcc--------------------HH-------HH--HHH---HhhhHHHHHH
Confidence 11111121111110 0 000 12 11 121 2222233334
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 182 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 182 lfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
-.|-.++.+.+.+|-.--||++-.-.|+|.-+-|.+++.++
T Consensus 372 slWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~ 412 (459)
T KOG4686|consen 372 SLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIA 412 (459)
T ss_pred HHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheee
Confidence 68999999999999999999999999999999999998886
No 216
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=87.57 E-value=8.8 Score=40.01 Aligned_cols=149 Identities=15% Similarity=0.117 Sum_probs=97.5
Q ss_pred chhHHH-HHHHHHHHHHHHHHHhhhccchhhcccCccchhHH-HHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHH
Q 017012 26 ETSALL-HSSSCFFFILSAYFVVLPLRDEGAISLGLSKLPGL-FVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFF 103 (379)
Q Consensus 26 E~~~~l-~~~l~~F~il~~y~ilrpird~l~vs~Gae~lp~l-~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f 103 (379)
-.+++. -..+..|--++++...-.--.+++.+.|.+.-+.. -.....+.++.+.+...+.| |++||+++......+
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd--~~gRr~lll~s~~~m 369 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVD--RFGRRKLLLFGAAGM 369 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHH--HhccHHHHHHhHHHH
Confidence 333444 45556677788888888888888777777754322 22334456666666689999 999999999999999
Q ss_pred HHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHH
Q 017012 104 SVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISST 183 (379)
Q Consensus 104 ~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slf 183 (379)
.++.++++........ |+. + . ....| .-+ ....+.+..++.....+-
T Consensus 370 ~~~~~~~~~~~~~~~~------------~~~---~------~----~~~~~-----~~~---~~~~~~v~~f~~g~g~v~ 416 (513)
T KOG0254|consen 370 SICLVILAVVGVFALY------------YPN---S------S----KGAGW-----LAI---VFLCLFIFSFAIGWGPVP 416 (513)
T ss_pred HHHHHHHHHHHHHhcc------------CCC---c------c----cchhH-----HHH---HHHHHHHHHHhcccccch
Confidence 9999988887643310 000 0 0 00022 211 123334566677777899
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHHH
Q 017012 184 WARVIDVMDSESGSRLFGFIGAGATL 209 (379)
Q Consensus 184 W~~~~di~~~~eakR~fgligag~~l 209 (379)
|..++++++.+=+.+..++..+...+
T Consensus 417 w~~~sEifp~~~r~~~~s~~~~~n~~ 442 (513)
T KOG0254|consen 417 WVIVSEIFPLRLRSKGASLAVAVNWL 442 (513)
T ss_pred hhhhhccCcHhHHhhhHHHHHHHHHH
Confidence 99999999988887777666555444
No 217
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=87.07 E-value=41 Score=34.90 Aligned_cols=76 Identities=22% Similarity=0.159 Sum_probs=46.5
Q ss_pred hHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 017012 298 ILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLLG 377 (379)
Q Consensus 298 ~~~g~~~i~~S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG 377 (379)
..++.+.-+++|-...-..+.++|-.+-.+ +.+.-.+.+.+--+ +. ..|.+.+.-.+.-+.- .+...++.+|+|
T Consensus 248 ~~~~w~~Y~~q~vflas~alalLY~TVLsf-~~lmt~yl~~~G~s-~~---~igi~R~~gav~Gl~g-T~~~p~l~~riG 321 (432)
T PF06963_consen 248 IIRGWRTYFRQPVFLASFALALLYFTVLSF-GGLMTAYLKSQGYS-PS---VIGIFRGLGAVFGLLG-TWVYPWLMKRIG 321 (432)
T ss_pred HhccHHHHHhCHHHHHHHHHHHHHHHHhcC-cHHHHHHHHHCCCC-HH---HHHHHHHHHHHHHHHH-HHHHHHHHHHhc
Confidence 345566778888888777777777766665 66666666655323 22 3344444333333333 344579999999
Q ss_pred CC
Q 017012 378 LL 379 (379)
Q Consensus 378 ~~ 379 (379)
++
T Consensus 322 lv 323 (432)
T PF06963_consen 322 LV 323 (432)
T ss_pred ch
Confidence 74
No 218
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=85.60 E-value=0.25 Score=52.47 Aligned_cols=187 Identities=16% Similarity=0.173 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH----------------------HHhH-HH-HHHHHH
Q 017012 179 TISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA----------------------FLGP-YL-LLFAAC 234 (379)
Q Consensus 179 ~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la----------------------~~g~-~l-ll~aa~ 234 (379)
...+=++|+.|-.+++++.-+.|++.+...+|-.+|-.+++.+. ++|. |+ +++.++
T Consensus 158 l~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~ 237 (539)
T PF03137_consen 158 LYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGI 237 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 44577899999999999999999988888888777766666542 1343 33 333343
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc--cCcccchHHHHHHHHhchhHH
Q 017012 235 LMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIV--KPHLWAILDGLRLIFSSNYLL 312 (379)
Q Consensus 235 ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~i~~S~yL~ 312 (379)
++.+..+-....-|...+... . + ...+.++.+++.+ ...+++++.+.+ .+.-.++...++.++++|-.+
T Consensus 238 ~~~l~aipl~~FPk~lp~~~~-~---~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~ 308 (539)
T PF03137_consen 238 LLFLSAIPLFFFPKKLPGTSE-R---Q-EEKESSERKEEDS----DKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFM 308 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHcCCccCCCccc-c---c-chhhhhhcchhhh----hhhcccccccccchhhhhhhHHHHHHHHhcChHHH
Confidence 333333332222233222100 0 0 0000000000000 000000000000 011125677788888888876
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCC
Q 017012 313 SVSLFLWL-SAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLLLGL 378 (379)
Q Consensus 313 ~i~~~v~l-~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrrlG~ 378 (379)
++.+-.+. ..+.+.+.-|.-|- ++.+|.-+...++ .+...+.+...++-.++.|.++||+.+
T Consensus 309 ~~~la~~~~~~~~~G~~tF~pKy-lE~QF~~sas~A~---~l~G~v~ip~~~~G~llGG~ivkk~kl 371 (539)
T PF03137_consen 309 CLILAGVFESFIVSGFATFLPKY-LESQFGLSASQAS---LLTGIVSIPGAALGILLGGYIVKKFKL 371 (539)
T ss_dssp -------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHH---HHHhhhhcchhheehheEEEEEEEecC
Confidence 65554444 44455666666443 3666665555553 333455555556666677899999853
No 219
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=84.33 E-value=52 Score=33.63 Aligned_cols=210 Identities=15% Similarity=0.096 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCC
Q 017012 71 LILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTAN 150 (379)
Q Consensus 71 ~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (379)
.++.-+++|.-.+|.. |++-+|.+...+ .++..+.+++....
T Consensus 57 ll~fg~~ap~a~~Lar--~~g~er~l~~~L-----lli~~G~~iR~~~~------------------------------- 98 (395)
T COG2807 57 LLAFGLFAPAAPRLAR--RFGEERSLFLAL-----LLIAAGILIRSLGG------------------------------- 98 (395)
T ss_pred HHHHHHHHhhhHHHHH--HHhhHHHHHHHH-----HHHHHHHHHHhccc-------------------------------
Confidence 4466688899999999 999999875543 33555565543310
Q ss_pred CCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhHH--
Q 017012 151 SADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGPY-- 227 (379)
Q Consensus 151 ~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g~~-- 227 (379)
.+. +|.| ...+=.++ .+...+.-+++-.-| +++.....|+-....++|+.+|+.++-.++ +.+.|
T Consensus 99 --~~~----L~~g---t~l~G~gI--av~nVLLPslIK~~F-pk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~ 166 (395)
T COG2807 99 --LPL----LFLG---TLLAGAGI--AVINVLLPSLIKRDF-PKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRG 166 (395)
T ss_pred --HHH----HHHH---HHHHHhhH--HHHHHhhhHHHHhhc-ccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHH
Confidence 121 2221 11111111 122235556666666 566777889999999999999998888887 44333
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHHHHHHHHh
Q 017012 228 LLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFS 307 (379)
Q Consensus 228 lll~aa~ll~l~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~ 307 (379)
.+..-+++..++... ++-+. .|. +.+ +.++ | .++ -..++|
T Consensus 167 aL~~WAl~allAl~~--WlPq~-~r~--------------~~~-~~~~----~----------~~~--------~~~vw~ 206 (395)
T COG2807 167 ALGFWALLALLALLI--WLPQA-LRE--------------QAA-SIAT----K----------LVS--------VRKVWR 206 (395)
T ss_pred HHHHHHHHHHHHHHH--Hhhhc-ccc--------------ccc-cccc----c----------ccc--------cccccc
Confidence 444445444444433 22221 110 000 0000 0 001 114778
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 308 SNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTGTSFLL 375 (379)
Q Consensus 308 S~yL~~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~~~~~gv~~l~~qlf~t~~llrr 375 (379)
||--..+.+++.+.+.....+-.=.-.++.|+--++++ =|...+..+.+++...++. ..+.+|
T Consensus 207 ~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~----aG~llsl~~l~~~~~~ll~-P~la~R 269 (395)
T COG2807 207 SPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAE----AGSLLSLMQLAQLPTALLI-PLLARR 269 (395)
T ss_pred CchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHH----hhhHHHHHHHHHHHHHHHH-HHHHHH
Confidence 88888777777665544333322223444444334322 2556666666666665544 455544
No 220
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=82.17 E-value=0.005 Score=62.24 Aligned_cols=53 Identities=17% Similarity=0.179 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHh
Q 017012 173 ALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 225 (379)
Q Consensus 173 ~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la-~~g 225 (379)
..++....++.|.+++|+|+++-+.+..|+....+.+|+++++.+...+. ..+
T Consensus 360 ~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~ 413 (451)
T PF00083_consen 360 AFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG 413 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34444556789999999999999999999999999999999887766554 444
No 221
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=81.91 E-value=68 Score=33.25 Aligned_cols=39 Identities=21% Similarity=0.205 Sum_probs=30.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHH
Q 017012 62 KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRF 102 (379)
Q Consensus 62 ~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~ 102 (379)
+.|.+......-+++-+...|.++| +.+||+-+.++..+
T Consensus 114 q~~llt~~v~~gmllga~~w~l~~d--~~grr~~f~~T~l~ 152 (528)
T KOG0253|consen 114 QAPLLTLSVFLGMLVGAMVWGLSAD--TIGRRKGFNLTFLV 152 (528)
T ss_pred hhhHHHHHHHhhhhhhhhhhheehh--hhhcchhhhhhHHH
Confidence 4566655667778888899999999 99999999887544
No 222
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=81.15 E-value=30 Score=34.27 Aligned_cols=59 Identities=8% Similarity=0.167 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHhhhccchhhcc--cCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhH
Q 017012 35 SCFFFILSAYFVVLPLRDEGAIS--LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKA 95 (379)
Q Consensus 35 l~~F~il~~y~ilrpird~l~vs--~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv 95 (379)
+.+++.+.+=++--|----+--+ .|-.+|-.++++.+..+.++.-+.|.|.| +.||+|-
T Consensus 44 lVyslmmAgDWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaD--kqGRKra 104 (454)
T KOG4332|consen 44 LVYSLMMAGDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLAD--KQGRKRA 104 (454)
T ss_pred HHHHHHHhhhhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHh--hhccccc
Confidence 44566677777777766666656 47778888999989999999999999999 9999984
No 223
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=81.13 E-value=65 Score=32.51 Aligned_cols=52 Identities=6% Similarity=0.018 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 017012 170 LWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF 223 (379)
Q Consensus 170 vw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~ 223 (379)
+....+....-....+.+.+..+.+...--.+++.+. +|+.++|.+.+.++.
T Consensus 329 ~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d 380 (410)
T TIGR00885 329 TLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIID 380 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHH
Confidence 3345555555577888888888654433345555543 999999999999874
No 224
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=79.94 E-value=15 Score=39.28 Aligned_cols=96 Identities=20% Similarity=0.260 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCC
Q 017012 73 LTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSA 152 (379)
Q Consensus 73 ~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (379)
.=+++-+...||.+ ++|+-+++++.+.++.+-|+.+..+. +
T Consensus 418 gEI~~~ffs~klI~--kiGHv~v~~lgLa~~~~Rf~~~S~L~-----------------------n-------------- 458 (618)
T KOG3762|consen 418 GEILFYFFSFKLIE--KIGHVNVMYLGLACNVGRFLYYSYLQ-----------------------N-------------- 458 (618)
T ss_pred chHHHHHHHHHHHH--HhcccceeeehhhHHHHHHHHHHHhc-----------------------C--------------
Confidence 34455566679989 99999999998888766665554432 1
Q ss_pred ccccccchhhhhhHHHHHHHHHHHHHHHHHHHH----HHHhhcCccchhHHHH-----HHHHHHHHHHHHhHHHHHH
Q 017012 153 DWGDHGWFYVSVRMGFFLWVALLNLITISSTWA----RVIDVMDSESGSRLFG-----FIGAGATLGQLFGSLFAAG 220 (379)
Q Consensus 153 ~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~----~~~di~~~~eakR~fg-----ligag~~lG~I~G~~l~~~ 220 (379)
.|. -. - .++++-++..++|+ ++.++.+++-.+-.=| +.|.|-++|+++|+.+...
T Consensus 459 ~W~-----vL----P----ieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~ 522 (618)
T KOG3762|consen 459 PWM-----VL----P----IEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVER 522 (618)
T ss_pred chh-----ee----e----HHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhee
Confidence 353 11 1 47777777777774 6778887776555433 3466777888887766544
No 225
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=76.37 E-value=1.1e+02 Score=32.39 Aligned_cols=63 Identities=14% Similarity=0.069 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHhhhcc-------chhhcccCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHH
Q 017012 33 SSSCFFFILSAYFVVLPLR-------DEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLI 99 (379)
Q Consensus 33 ~~l~~F~il~~y~ilrpir-------d~l~vs~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~ 99 (379)
.+..+.+.++.+.+..... +..- ...++.-|+--....+.++..|+-+.++| |++.|++...-
T Consensus 48 ~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~--~s~~~~~~i~sl~~~~~~~~gpl~s~l~~--rfg~R~v~i~G 117 (509)
T KOG2504|consen 48 VFASFLVNLSTDGLINSFGLLFEELMDYFG--SSSSQIAWIGSLLLGVYLLAGPLVSALCN--RFGCRTVMIAG 117 (509)
T ss_pred eHhHHHHHHhhhcchheehhhHHHHHHHhC--CCccHHHHHHHHHHHHHHHhccHHHHHHh--hcCchHHHHHH
Confidence 3444455555555544443 2111 13334566555556678899999999999 99999987543
No 226
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=74.71 E-value=1.2e+02 Score=32.02 Aligned_cols=46 Identities=9% Similarity=0.107 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhhcCccchhHHHHHHHH-HHHHHHHHhHHHHHHHH
Q 017012 177 LITISSTWARVIDVMDSESGSRLFGFIGA-GATLGQLFGSLFAAGMA 222 (379)
Q Consensus 177 ~~~~slfW~~~~di~~~~eakR~fgliga-g~~lG~I~G~~l~~~la 222 (379)
+....+-=++++++-+.+-+.+..|.--. ++.+|..+++.+.+..+
T Consensus 392 l~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~ 438 (493)
T PRK15462 392 LFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTS 438 (493)
T ss_pred HHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33444777889999999999999999866 44688888777766553
No 227
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=73.60 E-value=1.2e+02 Score=31.59 Aligned_cols=54 Identities=15% Similarity=0.134 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 168 FFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 168 Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~l 221 (379)
.|+..++=..+....-=+++.+.-+.+......|+.....++|..+|+.++...
T Consensus 385 ~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 385 VYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344333322333345556677888888888889998888888888888887655
No 228
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=73.44 E-value=16 Score=37.58 Aligned_cols=174 Identities=17% Similarity=0.155 Sum_probs=99.2
Q ss_pred cCcCchhHHHHHHHHHHHHHHHHHHhhhccchhhcccC-----ccchh----------H--------HHHHHHHHHHHHH
Q 017012 22 LHPHETSALLHSSSCFFFILSAYFVVLPLRDEGAISLG-----LSKLP----------G--------LFVGSLILTLIAA 78 (379)
Q Consensus 22 i~~~E~~~~l~~~l~~F~il~~y~ilrpird~l~vs~G-----ae~lp----------~--------l~~~~~~~~ll~~ 78 (379)
+.|+-.|..+...-..|-.-++||=.--+--+++.+.. .-..| . +++. ...-+.-.
T Consensus 320 lsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllit-slaefPGl 398 (528)
T KOG0253|consen 320 LSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLIT-SLAEFPGL 398 (528)
T ss_pred cChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHH-HHhhCCch
Confidence 44556666777777788888888866555555655511 11111 1 1222 22223334
Q ss_pred HHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCcccccc
Q 017012 79 PVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHG 158 (379)
Q Consensus 79 ~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 158 (379)
.+-+++.| |+||++-....+..|.++.++...-. . ||. . ..
T Consensus 399 LIt~~ive--rlGRKkTMal~l~~f~iflfll~~c~--~-----rn~------------------~-------tv----- 439 (528)
T KOG0253|consen 399 LITGVIVE--RLGRKKTMALSLILFGIFLFLLTTCK--T-----RNA------------------Y-------TV----- 439 (528)
T ss_pred hHHHHHHH--HhcchhHHHHHHHHHHHHHHHHHHhc--C-----cch------------------h-------HH-----
Confidence 45578999 99999988877766644433221110 1 000 0 02
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHhHH-HHHHHHHHHH
Q 017012 159 WFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFLGPY-LLLFAACLME 237 (379)
Q Consensus 159 w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~~g~~-lll~aa~ll~ 237 (379)
|+++ +|.| +++ .......|+-+++++.-+.---|.-+..+-+|+|+.|.++ ..+..+.. ++++...+.+
T Consensus 440 llf~--araf---isg----~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~s~sl~i~vy~~~~i 509 (528)
T KOG0253|consen 440 LLFT--ARAF---ISG----AFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAELSTSLPIFVYGALFI 509 (528)
T ss_pred HHHH--HHHH---Hhc----hheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhccceeehHHHHHHHHH
Confidence 2343 2443 232 2224456788888888888788999999999999999997 33333332 4454454445
Q ss_pred HHHHHHHH
Q 017012 238 LAAQSSKG 245 (379)
Q Consensus 238 l~~~~~~~ 245 (379)
++.++...
T Consensus 510 lagIavcf 517 (528)
T KOG0253|consen 510 LAGIAVCF 517 (528)
T ss_pred HHHHHhee
Confidence 66665443
No 229
>PRK03612 spermidine synthase; Provisional
Probab=72.71 E-value=1.3e+02 Score=31.77 Aligned_cols=32 Identities=25% Similarity=0.147 Sum_probs=25.7
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHH--HHhH
Q 017012 195 SGSRLFGFIGAGATLGQLFGSLFAAGMA--FLGP 226 (379)
Q Consensus 195 eakR~fgligag~~lG~I~G~~l~~~la--~~g~ 226 (379)
+.++..|-+.+.-++|+++|+.+++++- .+|.
T Consensus 142 ~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~ 175 (521)
T PRK03612 142 HLGHNVATVLAADYLGALVGGLAFPFLLLPRLGL 175 (521)
T ss_pred chhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcch
Confidence 4677889999999999999998888854 5664
No 230
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=66.92 E-value=1.6e+02 Score=30.38 Aligned_cols=98 Identities=17% Similarity=0.218 Sum_probs=65.2
Q ss_pred HHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccCCccCCchhhhccCCCCCCCccccccchh
Q 017012 82 TLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFY 161 (379)
Q Consensus 82 ~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~w~~ 161 (379)
+.+.+ +.+||...........+.++.+++..... .+ |..
T Consensus 371 ~~~~~--~~gR~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~----~~~ 409 (521)
T KOG0255|consen 371 GLLLP--EFGRRPPLFLSLFLAGIGLLLFGWLPDDL-----------------------------------GG----WLH 409 (521)
T ss_pred HHHHH--HhCcHHHHHHHHHHHHHHHHHHHHhhccc-----------------------------------hh----HHH
Confidence 56667 99888888777766666666666543211 00 011
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 017012 162 VSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFL 224 (379)
Q Consensus 162 ~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~~ 224 (379)
. +..+...............++++.+++.-+..-.+.++..+.+|.+++|.+.......
T Consensus 410 ~----~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~ 468 (521)
T KOG0255|consen 410 W----ILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQM 468 (521)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 1 2222223333333335588899999999999999999999999999999997666543
No 231
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=62.94 E-value=1.5e+02 Score=32.52 Aligned_cols=66 Identities=21% Similarity=0.115 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhhcCccch---hHHHHHHHHHHHHHHHHhHHHHHHHH-HH---h----HH-HHHHHHHHHHHHHHHHH
Q 017012 179 TISSTWARVIDVMDSESG---SRLFGFIGAGATLGQLFGSLFAAGMA-FL---G----PY-LLLFAACLMELAAQSSK 244 (379)
Q Consensus 179 ~~slfW~~~~di~~~~ea---kR~fgligag~~lG~I~G~~l~~~la-~~---g----~~-lll~aa~ll~l~~~~~~ 244 (379)
..+-+=++..|-++.+|. .++|.+.-.++++|++++..++.++. .+ | -. .+.++++++.++.+...
T Consensus 102 iKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 102 IKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred cccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 344566677888886654 45789999999999999999988886 43 2 22 34455555555555443
No 232
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=60.36 E-value=1.3e+02 Score=31.36 Aligned_cols=73 Identities=14% Similarity=0.105 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc-CccchhHHHHHHHHHHHHHHHHhHHHHHHHHH---HhHH--HHHHHHHHHHHHH
Q 017012 167 GFFLWVALLNLITISSTWARVIDVM-DSESGSRLFGFIGAGATLGQLFGSLFAAGMAF---LGPY--LLLFAACLMELAA 240 (379)
Q Consensus 167 ~Fyvw~~v~~~~~~slfW~~~~di~-~~~eakR~fgligag~~lG~I~G~~l~~~la~---~g~~--lll~aa~ll~l~~ 240 (379)
+++......+.+..+=| +.|..- .++-+-=+.|+++..+++.++++|.+++.+.. .+.| .+++.++++.++.
T Consensus 363 ~~l~~~~~~~g~~~~Gf--~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~ 440 (466)
T KOG2532|consen 363 ILLTIAIGLSGFNISGF--YKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGN 440 (466)
T ss_pred HHHHHHHHHcccchhhh--HhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhc
Confidence 44444444444444433 233333 56667777889999999999999999998863 2234 5555555554444
Q ss_pred H
Q 017012 241 Q 241 (379)
Q Consensus 241 ~ 241 (379)
+
T Consensus 441 i 441 (466)
T KOG2532|consen 441 I 441 (466)
T ss_pred h
Confidence 3
No 233
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=58.77 E-value=1.3e+02 Score=26.57 Aligned_cols=46 Identities=22% Similarity=0.221 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHH----HHHhhcCccchhHHHHHHHHHHHHHHHHhHHHH
Q 017012 173 ALLNLITISSTWA----RVIDVMDSESGSRLFGFIGAGATLGQLFGSLFA 218 (379)
Q Consensus 173 ~v~~~~~~slfW~----~~~di~~~~eakR~fgligag~~lG~I~G~~l~ 218 (379)
+....+..+.+|. ++.+..+.++..|..++.-+..+.+.++|+.+.
T Consensus 96 s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 96 SALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 4444455566774 578888889999999999999999988887663
No 234
>PRK10263 DNA translocase FtsK; Provisional
Probab=55.43 E-value=3.3e+02 Score=32.47 Aligned_cols=13 Identities=31% Similarity=0.677 Sum_probs=7.2
Q ss_pred HHHHhHHHHHHHH
Q 017012 210 GQLFGSLFAAGMA 222 (379)
Q Consensus 210 G~I~G~~l~~~la 222 (379)
|+++|..+..+|.
T Consensus 143 GGIIG~lLs~lL~ 155 (1355)
T PRK10263 143 GGVIGSLLSTTLQ 155 (1355)
T ss_pred cchHHHHHHHHHH
Confidence 5556555555544
No 235
>PF13150 DUF3989: Protein of unknown function (DUF3989)
Probab=50.73 E-value=24 Score=28.24 Aligned_cols=44 Identities=20% Similarity=0.279 Sum_probs=36.0
Q ss_pred hhhhHHHHhhcc-cCcCchhHHHHHHHHHHHHHHHHHHhhhccch
Q 017012 10 SRLDAFASVFVT-LHPHETSALLHSSSCFFFILSAYFVVLPLRDE 53 (379)
Q Consensus 10 ~~~~~~~~~~~~-i~~~E~~~~l~~~l~~F~il~~y~ilrpird~ 53 (379)
.+.+..++..|. +.|++...+...++..|..++.|.+++.+-|-
T Consensus 9 ~~~~~~Lr~~c~~Lsp~~R~~vvl~ml~~fa~l~ly~~~~ai~~~ 53 (85)
T PF13150_consen 9 DRADDRLRRYCGRLSPKQRLRVVLVMLVLFAALCLYMTVSAIYDI 53 (85)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456677777766 77778888999999999999999999987663
No 236
>PRK10983 putative inner membrane protein; Provisional
Probab=49.96 E-value=55 Score=33.08 Aligned_cols=50 Identities=16% Similarity=0.123 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhhcccCccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhH
Q 017012 31 LHSSSCFFFILSAYFVVLPLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKA 95 (379)
Q Consensus 31 l~~~l~~F~il~~y~ilrpird~l~vs~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~~r~rv 95 (379)
....+...+....+++++|.-.+++ .....+.+.-|+|.||.+ |.+.||-
T Consensus 15 ~~~~l~~~l~~~~~~il~pFl~~ll-------------~A~iLa~a~~Pl~~~L~~--~~~~rr~ 64 (368)
T PRK10983 15 LSVLFIAIMIVACFWVVQPFILGFA-------------WAGMVVIATWPLLLKLQK--ILWGRRS 64 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHH--HhCCCCc
Confidence 3333344455567778877433222 235678889999999999 9864443
No 237
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=46.42 E-value=3.7e+02 Score=28.20 Aligned_cols=46 Identities=17% Similarity=0.094 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHhh-cCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 177 LITISSTWARVIDV-MDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 177 ~~~~slfW~~~~di-~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
.+-.+.+-.-+.-. .....-+++.++-+.+..+|.++|+...+.+.
T Consensus 257 Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~ 303 (461)
T KOG3098|consen 257 SFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILS 303 (461)
T ss_pred HHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 34444444444444 55566788999999999999999999999887
No 238
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=43.10 E-value=3.8e+02 Score=27.37 Aligned_cols=50 Identities=12% Similarity=0.224 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017012 173 ALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 222 (379)
Q Consensus 173 ~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la 222 (379)
++.+.+...-.=.+++++.+...-.-.|+++....|+|..+++.++..+.
T Consensus 329 ~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~ 378 (433)
T PF03092_consen 329 EVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLM 378 (433)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333345899999888888999999999999999999999986
No 239
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=40.68 E-value=3.5e+02 Score=27.90 Aligned_cols=43 Identities=23% Similarity=0.377 Sum_probs=38.2
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 017012 182 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFL 224 (379)
Q Consensus 182 lfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~la~~ 224 (379)
..-+++=...++|+-||.-|...++.-.|-..|+.++..+...
T Consensus 114 AYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~ 156 (433)
T KOG3810|consen 114 AYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSL 156 (433)
T ss_pred hhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhh
Confidence 6677888889999999999999999999999999998888643
No 240
>PF05360 YiaAB: yiaA/B two helix domain; InterPro: IPR008024 This domain consists of two transmembrane helices and a conserved linking section.
Probab=40.25 E-value=41 Score=24.33 Aligned_cols=35 Identities=14% Similarity=0.151 Sum_probs=31.4
Q ss_pred hhcccCcCchhHHHHHHHHHHHHHHHHHHhhhccc
Q 017012 18 VFVTLHPHETSALLHSSSCFFFILSAYFVVLPLRD 52 (379)
Q Consensus 18 ~~~~i~~~E~~~~l~~~l~~F~il~~y~ilrpird 52 (379)
-+|+...+-..|-.....++|++.....+-|.+||
T Consensus 19 Gl~~~~~~l~~KGy~~~~~l~~l~s~~tl~K~vRD 53 (53)
T PF05360_consen 19 GLWNAPLDLSEKGYYAMGLLFLLFSAFTLQKTVRD 53 (53)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHHHhhhhhcCC
Confidence 36788888888999999999999999999999998
No 241
>PF02313 Fumarate_red_D: Fumarate reductase subunit D; InterPro: IPR003418 Fumarate reductase is a membrane-bound flavoenzyme consisting of four subunits, A-B. A and B comprise the membrane-extrinsic catalytic domain and C and D link the catalytic centres to the electron-transport chain. This family consists of the 13kDa hydrophobic subunit D. This component may be required to anchor the catalytic components of the fumarate reductase complex to the cytoplasmic membrane.; GO: 0006106 fumarate metabolic process, 0016020 membrane; PDB: 3P4R_P 1KF6_P 3P4Q_P 3P4S_D 3CIR_P 2B76_D 1L0V_P 3P4P_D 1KFY_P.
Probab=38.98 E-value=45 Score=28.35 Aligned_cols=33 Identities=21% Similarity=0.433 Sum_probs=22.7
Q ss_pred hhcCccchhHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 189 DVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 189 di~~~~eakR~fgligag~~lG~I~G~~l~~~l 221 (379)
+.-+...-.=+.+++||||+..++++|.+.-.+
T Consensus 3 ~~~kRS~EPi~W~LFgAGGm~~Al~~PvlILi~ 35 (118)
T PF02313_consen 3 QNPKRSDEPIFWGLFGAGGMWSALFGPVLILIL 35 (118)
T ss_dssp SS--B-SHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred CCCcccCCCceeeeecchHHHHHHHHHHHHHHH
Confidence 333334444578999999999999999875443
No 242
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=38.12 E-value=3e+02 Score=28.78 Aligned_cols=112 Identities=17% Similarity=0.216 Sum_probs=73.9
Q ss_pred cCccchhHHHH-H---HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhchhccccC
Q 017012 58 LGLSKLPGLFV-G---SLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESLDAVSS 133 (379)
Q Consensus 58 ~Gae~lp~l~~-~---~~~~~ll~~~iy~~L~~~~r~~r~rv~~~~~~~f~~~~llfa~~~~~~~~~~~~~~~~~~~~~~ 133 (379)
.|.+...+++. . ....++++.|...+ .++-+++..+-+.+..+..+.|++...
T Consensus 274 w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~-----~l~~~~~i~lGl~~~~~~~~~~af~~~------------------ 330 (463)
T KOG2816|consen 274 WNKKEFSDLLSLVSILGIISQLLLLPLLSS-----ILGEKRLISLGLLSEFLQLLLFAFATE------------------ 330 (463)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHhhhhHhhHHHHHHHHHHHHHHHhcc------------------
Confidence 46666665433 2 23455555555544 555667666666666777777777541
Q ss_pred CccCCchhhhccCCCCCCCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHH
Q 017012 134 NAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLF 213 (379)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~w~~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~ 213 (379)
.|. .|.. .+ ...++..+....=+++.-+.+.||..+.+++++....+..++
T Consensus 331 -------------------~w~----~~~~--~v----~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~ 381 (463)
T KOG2816|consen 331 -------------------TWM----MFAA--GV----VVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVV 381 (463)
T ss_pred -------------------chh----hhHH--HH----HHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhh
Confidence 353 1221 12 234455566677788999999999999999999999999999
Q ss_pred hHHHHHHH
Q 017012 214 GSLFAAGM 221 (379)
Q Consensus 214 G~~l~~~l 221 (379)
+|.+=+.+
T Consensus 382 ~~~~~~~i 389 (463)
T KOG2816|consen 382 SPALYGNI 389 (463)
T ss_pred hHHHHHHH
Confidence 98776654
No 243
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=37.05 E-value=65 Score=31.85 Aligned_cols=61 Identities=20% Similarity=0.181 Sum_probs=42.7
Q ss_pred HHHHHHHhhcCccc---hhHHHHHHHHHHHHHHHHhHHHHHHHH-HHhHH-HHHHHHHHHHHHHHH
Q 017012 182 STWARVIDVMDSES---GSRLFGFIGAGATLGQLFGSLFAAGMA-FLGPY-LLLFAACLMELAAQS 242 (379)
Q Consensus 182 lfW~~~~di~~~~e---akR~fgligag~~lG~I~G~~l~~~la-~~g~~-lll~aa~ll~l~~~~ 242 (379)
-.=.+.+|-++.++ .+++|..+-.+.++|.++|..+.+++. +.|-. -+.++++.+.++...
T Consensus 53 ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 53 NISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHH
Confidence 34455889998773 455799999999999999998888877 55543 455555555555443
No 244
>TIGR02871 spore_ylbJ sporulation integral membrane protein YlbJ. Members of this protein family are found exclusively in Firmicutes (low-GC Gram-positive bacterial) and are known from studies in Bacillus subtilis to be part of the sigma-E regulon. Mutation leads to a sporulation defect, confirming that members of this protein family, YlbJ, are sporulation proteins. This protein appears to be universal among endospore-forming bacteria, but is encoded by a pair ORFs distant from eash other in Symbiobacterium thermophilum IAM14863.
Probab=28.80 E-value=4.7e+02 Score=26.57 Aligned_cols=49 Identities=16% Similarity=0.132 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHhHHHHHHH
Q 017012 172 VALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 221 (379)
Q Consensus 172 ~~v~~~~~~slfW~~~~di~~~~eakR~fgligag~~lG~I~G~~l~~~l 221 (379)
.+++.......-=.+-++..+.+||.|+-.+-+-.+-+ .++|..-.+.+
T Consensus 87 l~GyP~Ga~~t~~ly~~g~it~~Ea~~Ll~f~nnssPl-Fiig~V~~~~l 135 (362)
T TIGR02871 87 LSGYPLGAKYSADLYEEKLITFEEAERLLNFANNSGPL-FIIGAVGTSML 135 (362)
T ss_pred HcCCchHHHHHHHHHHCCCCCHHHHHHHHHHHcCCChH-HHHHHHHHHHh
Confidence 33343333334444578888999999998877665432 44454444444
No 245
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=25.57 E-value=8e+02 Score=27.45 Aligned_cols=61 Identities=15% Similarity=0.255 Sum_probs=40.7
Q ss_pred cccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc------CccchhHHHHHHHHHHHH-HHHHhHHHHHHH
Q 017012 156 DHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVM------DSESGSRLFGFIGAGATL-GQLFGSLFAAGM 221 (379)
Q Consensus 156 ~~~w~~~~~~~~Fyvw~~v~~~~~~slfW~~~~di~------~~~eakR~fgligag~~l-G~I~G~~l~~~l 221 (379)
..|++|. +.+...++-+..+.=+|.|+..+- +..+|-++.|.++..+.. |.++||.+..-+
T Consensus 389 l~N~if~-----~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkf 456 (735)
T KOG3626|consen 389 LSNPIFM-----LVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKF 456 (735)
T ss_pred hcCchHH-----HHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeee
Confidence 4778875 444466666667778888888875 345688899888876544 444476665444
No 246
>TIGR00328 flhB flagellar biosynthetic protein FlhB. FlhB and its functionally equivalent orthologs, from among a larger superfamily of proteins involved in type III protein export systems, are specifically involved in flagellar protein export. The seed members are restricted and the trusted cutoff is set high such that the proteins gathered by this model play roles specifically related to flagellar structures. Full-length homologs scoring below the trusted cutoff are involved in peptide export but not necessarily in the creation of flagella.
Probab=25.51 E-value=6.8e+02 Score=25.20 Aligned_cols=59 Identities=17% Similarity=0.159 Sum_probs=35.0
Q ss_pred ccchHHHHHHHHhchhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 017012 295 LWAILDGLRLIFSSNYLL----SVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEI 353 (379)
Q Consensus 295 ~~~~~~g~~~i~~S~yL~----~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~ 353 (379)
+.|+.+|+|-+++-+-+. .++=++++..+...++...+.........+..+...+++..
T Consensus 120 rlNPi~G~KriFS~~~l~el~KsllK~~~i~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 182 (347)
T TIGR00328 120 KINPIKGLKRLFSLQSLVELLKSLLKVFLVSFVAYFVLRNSLGELLSLSLYSLVQAITNFLDI 182 (347)
T ss_pred hcCHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 459999999999988873 33333334444444555555555555555665555554443
No 247
>PRK12468 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=24.40 E-value=7.2e+02 Score=25.45 Aligned_cols=58 Identities=14% Similarity=0.161 Sum_probs=34.7
Q ss_pred ccchHHHHHHHHhchhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 017012 295 LWAILDGLRLIFSSNYLL----SVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAE 352 (379)
Q Consensus 295 ~~~~~~g~~~i~~S~yL~----~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~ 352 (379)
+.|+.+|+|-+++.+-+. .++=++++..+...++...+..+......+..+...+++.
T Consensus 127 rlNP~~GlKriFS~~~l~el~KsllKv~li~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 188 (386)
T PRK12468 127 RMSPVAGLKRMFSSQALAELLKAILKATLVGWVTGLFLWHNWPDMMRLIAAPPVAALGDALH 188 (386)
T ss_pred hcCHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 459999999999888874 3333334444444444445555555555566555555544
No 248
>COG0628 yhhT Predicted permease, member of the PurR regulon [General function prediction only]
Probab=23.74 E-value=4.4e+02 Score=26.04 Aligned_cols=31 Identities=16% Similarity=0.355 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHhhcCCC-CCchhHHHHHHHHH
Q 017012 71 LILTLIAAPVSTLIFSLPN-LSKAKALVLIHRFF 103 (379)
Q Consensus 71 ~~~~ll~~~iy~~L~~~~r-~~r~rv~~~~~~~f 103 (379)
...+.++.|++.|+.+ | .+|.-...+++..+
T Consensus 44 ~vla~l~~p~~~~L~k--~~~~r~~a~~~~~ll~ 75 (355)
T COG0628 44 LVLAYLLNPLVRRLEK--RGIPRLLAVLLVLLLI 75 (355)
T ss_pred HHHHHHHHHHHHHHHH--cCCChHHHHHHHHHHH
Confidence 6778899999999988 6 44444444444333
No 249
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=23.37 E-value=2.9e+02 Score=21.95 Aligned_cols=63 Identities=8% Similarity=0.084 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccchhhcc-cCccchhH--HHH-HHHHHHHHHHHHHHHhhcCCC-CCc
Q 017012 28 SALLHSSSCFFFILSAYFVVLPLRDEGAIS-LGLSKLPG--LFV-GSLILTLIAAPVSTLIFSLPN-LSK 92 (379)
Q Consensus 28 ~~~l~~~l~~F~il~~y~ilrpird~l~vs-~Gae~lp~--l~~-~~~~~~ll~~~iy~~L~~~~r-~~r 92 (379)
+-.+.+.+.++...++|-++-...+++.-. .....+++ +.. +.++++.+.+.+|.+.+| | +.+
T Consensus 16 r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g~~~~~~~~~l~~~Yv~~An--~~~D~ 83 (91)
T PF04341_consen 16 RLAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLGLGQIVFAWVLTWLYVRRAN--REFDP 83 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHc--cccCH
Confidence 345566666777777888887777444444 22125555 322 557788899999999888 6 554
No 250
>PRK09108 type III secretion system protein HrcU; Validated
Probab=23.28 E-value=7.7e+02 Score=24.85 Aligned_cols=57 Identities=18% Similarity=0.107 Sum_probs=34.0
Q ss_pred ccchHHHHHHHHhchhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 017012 295 LWAILDGLRLIFSSNYLL----SVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLA 351 (379)
Q Consensus 295 ~~~~~~g~~~i~~S~yL~----~i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G 351 (379)
+.|+.+|+|-+++.+-+. .++=++++..+...++.-.+.........+..+...+++
T Consensus 122 rlNP~~glKriFS~~~l~el~KsllK~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (353)
T PRK09108 122 ALNPAAGLKKIFSLRSLIELVKMIVKAVVIAAVLWKGITSLMPLIVGAAYQSPPDLAQILW 182 (353)
T ss_pred hcCHhHhHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 458999999999988874 333333444444444445555555555556555544443
No 251
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=23.26 E-value=6.2e+02 Score=26.72 Aligned_cols=57 Identities=18% Similarity=0.249 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHhh-----hccchhhcc-cCccchhHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 017012 29 ALLHSSSCFFFILSAYFVVL-----PLRDEGAIS-LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNL 90 (379)
Q Consensus 29 ~~l~~~l~~F~il~~y~ilr-----pird~l~vs-~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~r~ 90 (379)
++++.+++.||.-...+..- =+++....+ ..+..++- ...+..++..++.|.++| |.
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~---~~~~~g~v~~i~ag~lsd--r~ 336 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLST---PYDVGGIVGLILAGYLSD--RL 336 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccc---hHHhhhHHHHHHHHHHHH--HH
Confidence 46667777666544333221 122211122 22333333 224456666777788888 85
No 252
>cd02432 Nodulin-21_like_1 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=22.17 E-value=6.5e+02 Score=23.48 Aligned_cols=98 Identities=15% Similarity=0.023 Sum_probs=38.5
Q ss_pred hhhhhHHHHhhcccCcCchhHHHHHHHHHHHHHHHHHHhhhccchhhcccCccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 017012 9 KSRLDAFASVFVTLHPHETSALLHSSSCFFFILSAYFVVLPLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLP 88 (379)
Q Consensus 9 ~~~~~~~~~~~~~i~~~E~~~~l~~~l~~F~il~~y~ilrpird~l~vs~Gae~lp~l~~~~~~~~ll~~~iy~~L~~~~ 88 (379)
++.++..++.=..+.++|...=+...+..|+ .+...-+-|+-.-++.. +...++.-...+.+.-+++..+-+++++
T Consensus 115 ~~~~~~~~~~e~g~~~~~~~~p~~aal~s~~-sf~lg~liPllpy~~~~-~~~~~~~s~~~~~~aL~~~G~~~a~~~~-- 190 (218)
T cd02432 115 KDALEAHARDELGITEGEYANPWQAALASAI-SFSVGALLPLLAILLAP-AAWKVPVTIIATLLALALTGYVSARLGG-- 190 (218)
T ss_pred cChHHHHHHHhcCCCCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHHHCC--
Confidence 3344444444445555554333333333332 22223334544444332 1111222222233333344444444444
Q ss_pred CCCchhHHHHHHHHHHHHHHHH
Q 017012 89 NLSKAKALVLIHRFFSVSLLVF 110 (379)
Q Consensus 89 r~~r~rv~~~~~~~f~~~~llf 110 (379)
+-.++..+.-+..+.+...+.|
T Consensus 191 ~~~~~~~l~~~~iG~~aa~vty 212 (218)
T cd02432 191 ASVLRAILRNVIWGALAMALTY 212 (218)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
Confidence 4334444444444444333333
No 253
>PRK08156 type III secretion system protein SpaS; Validated
Probab=21.67 E-value=8.5e+02 Score=24.68 Aligned_cols=59 Identities=15% Similarity=0.195 Sum_probs=33.7
Q ss_pred ccchHHHHHHHHhchhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 017012 295 LWAILDGLRLIFSSNYLLS----VSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEI 353 (379)
Q Consensus 295 ~~~~~~g~~~i~~S~yL~~----i~~~v~l~~~~~~lv~~~~~~~v~~~~~~~~~~taf~G~~ 353 (379)
+.|+.+|+|-+++.+-+.- +.=++++..+...++...+..+......+..+...+++..
T Consensus 115 rlNP~~GlKriFS~~~lvel~KsllKv~li~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 177 (361)
T PRK08156 115 ALNPVKGLKKIFSLRTVKEFVKALLYLIVFALTAYVFWKNYKKEIFSQLNGNIVGLIVIWREL 177 (361)
T ss_pred hcCHhHhHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 4589999999998888743 3333333444444444444555454445555555544433
Done!