Query 017014
Match_columns 379
No_of_seqs 166 out of 443
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 07:31:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017014.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017014hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jov_A HI1317; hypothetical pr 100.0 2.4E-43 8.3E-48 334.5 21.0 222 71-357 11-240 (270)
2 2hta_A Putative enzyme related 100.0 1.1E-31 3.8E-36 258.1 21.4 229 61-353 20-267 (309)
3 2cir_A Hexose-6-phosphate muta 100.0 3.4E-31 1.2E-35 252.0 18.2 215 80-354 6-249 (297)
4 3k25_A SLR1438 protein; struct 100.0 2.5E-30 8.5E-35 246.9 21.0 215 73-346 2-246 (289)
5 3mwx_A Aldose 1-epimerase; str 99.8 1.1E-20 3.7E-25 182.6 15.4 155 77-237 10-198 (326)
6 3os7_A Galactose mutarotase-li 99.8 1.8E-20 6.3E-25 182.7 16.8 159 74-238 11-212 (341)
7 3nre_A Aldose 1-epimerase; str 99.8 6.4E-20 2.2E-24 175.7 18.9 142 81-239 2-170 (291)
8 1yga_A Hypothetical 37.9 kDa p 99.8 1.6E-18 5.6E-23 168.2 16.2 151 80-238 9-204 (342)
9 3dcd_A Galactose mutarotase re 99.7 2.1E-16 7E-21 152.6 13.8 124 87-222 4-150 (307)
10 3q1n_A Galactose mutarotase re 99.7 2.9E-16 9.8E-21 150.2 13.9 127 83-222 2-150 (294)
11 1snz_A Aldose 1-epimerase; mut 99.7 2.3E-15 7.9E-20 146.7 17.5 150 81-240 19-207 (344)
12 1lur_A Aldose 1-epimerase; vit 99.2 5E-11 1.7E-15 116.2 13.1 149 82-238 14-197 (339)
13 1nsx_A Galactose mutarotase; e 98.9 1.2E-08 4E-13 100.0 11.5 133 81-222 12-177 (347)
14 1z45_A GAL10 bifunctional prot 98.8 5.5E-09 1.9E-13 108.9 9.5 148 84-239 374-565 (699)
15 3imh_A Galactose-1-epimerase; 98.8 9.8E-08 3.4E-12 93.8 14.9 138 79-225 14-186 (338)
16 3ty1_A Hypothetical aldose 1-e 98.3 5E-06 1.7E-10 82.8 11.9 138 79-221 46-217 (384)
17 3blc_A Inner membrane protein 67.4 43 0.0015 31.9 11.2 121 86-211 37-167 (330)
18 4ep8_B Urease subunit beta; al 62.4 4.6 0.00016 33.5 2.8 31 187-217 13-43 (101)
19 4ac7_B Urease subunit beta; hy 51.4 7.2 0.00025 33.5 2.2 31 187-217 19-49 (126)
20 4ubp_B Protein (urease (chain 51.4 7.2 0.00025 33.5 2.2 31 187-217 19-49 (126)
21 2yfo_A Alpha-galactosidase-suc 48.5 26 0.00089 37.4 6.5 56 167-222 130-187 (720)
22 4fnq_A Alpha-galactosidase AGA 48.3 23 0.00077 37.9 6.0 58 166-223 129-188 (729)
23 2xn2_A Alpha-galactosidase; hy 45.9 33 0.0011 36.7 6.8 56 167-222 134-191 (732)
24 3isy_A Bsupi, intracellular pr 45.4 24 0.00082 29.8 4.5 22 190-211 16-37 (120)
25 3bs6_A Inner membrane protein 45.1 1.9E+02 0.0064 26.7 11.6 118 86-212 6-137 (280)
26 3mi6_A Alpha-galactosidase; NE 32.8 52 0.0018 35.6 5.8 55 167-221 131-187 (745)
27 2ys4_A Hydrocephalus-inducing 29.6 24 0.00081 28.6 2.0 31 191-221 40-70 (122)
28 3qga_A UREA2, fusion of urease 27.3 21 0.00073 33.4 1.4 30 187-216 118-147 (225)
29 1e9y_A Urease subunit alpha; h 26.8 21 0.00071 33.7 1.2 31 187-217 118-148 (238)
30 1yew_A Particulate methane mon 25.3 34 0.0011 34.3 2.5 29 182-212 256-284 (382)
31 2qsv_A Uncharacterized protein 23.4 40 0.0014 30.2 2.4 43 191-233 18-61 (220)
32 2x3c_A Toxic extracellular end 22.4 55 0.0019 32.0 3.4 19 192-210 36-54 (343)
33 3rfr_A PMOB; membrane, oxidore 21.6 53 0.0018 33.3 3.1 23 190-212 296-318 (419)
No 1
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=100.00 E-value=2.4e-43 Score=334.52 Aligned_cols=222 Identities=14% Similarity=0.173 Sum_probs=186.7
Q ss_pred CceEEEecCCeeeEEEEeCCCCEEEEEcCCeEEEEEeecccCCCcceeEEecCCCCCCCCCCcccceeEEecCCCC----
Q 017014 71 HGVTFEDIDGSCVAKMGFENGSTATLMLPSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQGGLSSAFSCGSD---- 146 (379)
Q Consensus 71 ~gvtf~~~~gl~~v~L~~~~gssA~I~L~GAhVtSwkp~~w~~g~~elL~lS~~A~~dggkaIRGGVPICfPfg~~---- 146 (379)
..+++...+|.+.+.|++.+ .+|+|+++||+|+||+++ +++.|+||+|+.+.+++++|||||||||||++++
T Consensus 11 ~~~~~~~~~~~~~~~l~~~~-~~a~i~~~Ga~l~s~~~~---~~g~e~Lw~~~~~~~~~~~~irGGiPvlfP~~gr~~~~ 86 (270)
T 1jov_A 11 PELHLVQHNDIPVLHLKHAV-GTAKISLQGAQLISWKPQ---NAKQDVLWLSEVEPFKNGNAIRGGVPICYPWFGGVKQP 86 (270)
T ss_dssp TTEEEEEETTEEEEEEEETT-EEEEEETBTTEEEEEEET---TCSSCSBCBCTTCCCCTTSCCSBSCCEEBSSCGGGSSS
T ss_pred CceEEeeeCCceEEEEeCCC-cEEEEECCCCEEEEEEEC---CCCceEEEECcHHhcCCCCCccCccEEEEeccCCCCCC
Confidence 46788777898888888744 589999999999999986 3568999999999999999999999999997662
Q ss_pred -CCCcCccCcEEeeecCCCCccEEEEEeeCCCCCceEEEEEEEEeCCceEEEEEEEeCCCCcchhhhhhccceecCCCCc
Q 017014 147 -GEVWSPCNWTLHDISGNPQEFIQVELISSDTVDMVEIRCIVTLNEASVSSELVVSNFRSSSLQLAGSIISHLTVSTPEA 225 (379)
Q Consensus 147 -~~FAR~~~W~l~~~~~~~~~~v~l~L~ls~~~~~F~L~~~VtL~~~~L~l~L~V~Ntg~~pf~ft~ALHTYf~VsDi~~ 225 (379)
.||||++.|+|.+...+ ++.++|+|.+.++++.|+|+++++|+ |+++++|+|+|++|| +.++|+||+|+|+++
T Consensus 87 ~HGfaR~~~W~v~~~~~~-~~~v~l~~~l~~~~~~f~l~~~~~L~---l~~~~~v~N~g~~p~--~~g~HpyF~v~d~~~ 160 (270)
T 1jov_A 87 AHGTARIRLWQLSHYYIS-VHKVRLEFELFSDLNIIEAKVSMVFT---DKCHLTFTHYGEESA--QAALHTYFNIGDINQ 160 (270)
T ss_dssp TTBSGGGSBCEEEEEEEE-TTEEEEEEEEECTTSCEEEEEEEEES---SSEEEEEEECCSSCE--EEEECCEEECSCGGG
T ss_pred CCceecCCCcEEeeeccC-CCcEEEEEEECCCccccEEEEEEEEC---CeEEEEEEeCCchhH--hhhcccceecCCcce
Confidence 36999999999887632 35688888888877889999999994 899999999999874 799999999999999
Q ss_pred eEEecCCCCCcccCCCCCCCcccCCCCccccccccCcchhhhcccccccccccccccCCCCcchhhhhccccCcceeecC
Q 017014 226 NYAVGLEGSDFFNMSPVSSNFVIIPPENSEQNNFIWSPMRFLSALGARNEKVADAAHSSFSESDEEMQREENDSYKQLKE 305 (379)
Q Consensus 226 v~V~GLeG~~YlDkl~~~s~f~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~q~~~~~~~~~~~~~~~~E~~~~~~~~~ 305 (379)
++|.||++ .|+|+++. +. ..+ ...+.|++
T Consensus 161 ~~v~g~~~-~~~d~l~~----------------------------~~---------------------~~~-~~~~~~~~ 189 (270)
T 1jov_A 161 VEVQGLPE-TCFNSLNQ----------------------------QQ---------------------ENV-PSPRHISE 189 (270)
T ss_dssp EEEESCCS-EEEETTTT----------------------------EE---------------------EEC-CSSBCCSS
T ss_pred EEEECCCC-cceeccCC----------------------------cc---------------------ccc-CCcccCCC
Confidence 99999955 89998841 00 001 12488999
Q ss_pred ccceEEcCCCCeeEEecCc---eeEEEeeCccccCCceEEEccchhhhhhccccc
Q 017014 306 KMSRIYTSAPTNFTIIDRV---IFSKKFSGFLSLLSKSCIFRIHASRILRMHVDE 357 (379)
Q Consensus 306 EvDRVY~~aP~~~tIiD~~---~~~~~~~~~~~~~s~~~v~~~~~~~~~~m~~~~ 357 (379)
|+||||.+.+..++|.|++ ++.++++|+ ++.||||||++++.+|.-|+
T Consensus 190 ~~D~vy~~~~~~~~i~d~~~~~~i~v~~~~~----~~~vvWnP~~~~~~d~~~~~ 240 (270)
T 1jov_A 190 NVDCIYSAENMQNQILDKSFNRTIALHHHNA----SQFVLWNPWHKKTSGMSETG 240 (270)
T ss_dssp CEEEEEECSSSEEEEEETTTTEEEEEEEESC----SEEEEEECTTSCCTTCCTTG
T ss_pred CccceeCCCCCCEEEEECCCCcEEEEEEcCC----CeEEEECCCccccccccccc
Confidence 9999999999999999874 488999997 99999999998888987543
No 2
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A
Probab=100.00 E-value=1.1e-31 Score=258.09 Aligned_cols=229 Identities=12% Similarity=0.100 Sum_probs=182.3
Q ss_pred HhhHHhhhCC-CceEEEecCCeeeEEEEeCCCCEEEEEcCCeEEEEEeecccCCCcceeEEecCCCCCCCCCCcccceeE
Q 017014 61 VDYLEEEFSG-HGVTFEDIDGSCVAKMGFENGSTATLMLPSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQGGLSS 139 (379)
Q Consensus 61 ~~~L~~~f~~-~gvtf~~~~gl~~v~L~~~~gssA~I~L~GAhVtSwkp~~w~~g~~elL~lS~~A~~dggkaIRGGVPI 139 (379)
+..|+..|+. ..+++.+.++...+.|+.. +.+|+|..+||+|+||+++ ++.|+||.++.+.|+++++||||+|+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~n~-~~~a~I~~~GA~l~s~~~~----~g~evL~~~~~~~~~~~~~~~GG~pi 94 (309)
T 2hta_A 20 IFALPVIEQLTPVLSRRQLDDLDLIVVDHP-QVKASFALQGAHLLSWKPV----GEEEVLWLSNNTPFKTGVALRGGVPI 94 (309)
T ss_dssp HHHSCCSEECSSSEEEEEETTEEEEEEEET-TEEEEEETBTTEEEEEEET----TSCCCBCBCTTCCCCTTCCCSBSBCE
T ss_pred hhhhcccccCCCceEEeecCCceEEEEeCC-CeEEEEeccCcEEEEEEeC----CCCEEEeCCchHhccCCCCeeccceE
Confidence 4567777884 4788887788888888774 5899999999999999986 34799999998999999999999999
Q ss_pred EecCCCC--------CCCcCccCcEEeeecCCCCccEEEEEeeCCC-------CCceEEEEEEEEeCCceEEEEEEEeCC
Q 017014 140 AFSCGSD--------GEVWSPCNWTLHDISGNPQEFIQVELISSDT-------VDMVEIRCIVTLNEASVSSELVVSNFR 204 (379)
Q Consensus 140 CfPfg~~--------~~FAR~~~W~l~~~~~~~~~~v~l~L~ls~~-------~~~F~L~~~VtL~~~~L~l~L~V~Ntg 204 (379)
|||+++. .+|||++.|++.+...++ +.+.|+|.+.+. |+.|+++++++| +++|+++++++|
T Consensus 95 l~P~~gRi~~g~~~~HGfar~~~W~v~~~~~~~-~~~~v~l~l~s~~~~~~gyP~~~~l~vty~L-~~~L~i~~~~~N-- 170 (309)
T 2hta_A 95 CWPWFGPAAQQGLPSHGFARNLPWALKAHNEDD-NGVMLTFELQSSEATRKYWPHDFTLLARFKV-GKTCEIELEAHG-- 170 (309)
T ss_dssp EBSCCSSCSSTTCCTTBSGGGSBCEEEEEEECS-SCEEEEEEEECCHHHHHHSCCCCEEEEEEEE-SSSEEEEEEEES--
T ss_pred EEecCCCCCCCCCCCccCcCCCceEEEeEecCC-CceEEEEEeCCChHHhhcCCCceEEEEEEEE-CCceEEEEEEEC--
Confidence 9996652 149999999998765322 224455555432 579999999999 899999999999
Q ss_pred CCcchhhhhhccceecCCCCceEEecCCCCCcccCCCCCCCcccCCCCccccccccCcchhhhcccccccccccccccCC
Q 017014 205 SSSLQLAGSIISHLTVSTPEANYAVGLEGSDFFNMSPVSSNFVIIPPENSEQNNFIWSPMRFLSALGARNEKVADAAHSS 284 (379)
Q Consensus 205 ~~pf~ft~ALHTYf~VsDi~~v~V~GLeG~~YlDkl~~~s~f~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~q~~~~~ 284 (379)
|+.|..++|+||+++++.++.+.++ +..|+|+++. +.
T Consensus 171 --~~~~~~g~H~YFnl~~~~~~~l~~~-~~~~~~~~~~----------------------------~~------------ 207 (309)
T 2hta_A 171 --EFATTSALHSYFNVGDIANVKVSGL-GDRFIDKVND----------------------------AK------------ 207 (309)
T ss_dssp --SEEEEEEECCEEECSCGGGCEEECC-CSEEEETTTT----------------------------TE------------
T ss_pred --CeEehhcCCceEecCCccceEEECC-CCceEeccCC----------------------------cc------------
Confidence 8999999999999999999999999 8889997741 00
Q ss_pred CCcchhhhhccccCcceeecCccceEEcCCCCeeEEecCc---eeEEEeeCccccCCceEEEccchhhhhhc
Q 017014 285 FSESDEEMQREENDSYKQLKEKMSRIYTSAPTNFTIIDRV---IFSKKFSGFLSLLSKSCIFRIHASRILRM 353 (379)
Q Consensus 285 ~~~~~~~~~~~E~~~~~~~~~EvDRVY~~aP~~~tIiD~~---~~~~~~~~~~~~~s~~~v~~~~~~~~~~m 353 (379)
...++ +..+.|.+++|++|.+.+..++|.|+. ++.+...++ +..+|||||.++.+.|
T Consensus 208 -------~~~~~-~~~~df~~~~D~~~~~~~~~~~l~~~~~g~~l~v~~~~~----p~~~vwtp~~~~~~~~ 267 (309)
T 2hta_A 208 -------EGVLT-DGIQTFPDRTDRVYLNPEACSVIHDATLNRTIDVVHHHH----LNVVGWNPGPALSVSM 267 (309)
T ss_dssp -------EEECS-SSCEECSSCEEEEESSCCSEEEEEETTTTEEEEEEEESC----SEEEEEECHHHHHHHC
T ss_pred -------ccccc-CCceecCCccCcEEeCCCCCEEEEeCCCCcEEEEEECCC----CcEEEECCCccccccc
Confidence 00112 224888999999999766778888863 477878776 8999999998776655
No 3
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*
Probab=99.97 E-value=3.4e-31 Score=252.03 Aligned_cols=215 Identities=13% Similarity=0.162 Sum_probs=172.0
Q ss_pred CeeeEEEEeCCCC--EEEEEcCCeEEEEEeecccCCCcceeEEecCCCCCCCCCCcccceeEEecCCCC-----------
Q 017014 80 GSCVAKMGFENGS--TATLMLPSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQGGLSSAFSCGSD----------- 146 (379)
Q Consensus 80 gl~~v~L~~~~gs--sA~I~L~GAhVtSwkp~~w~~g~~elL~lS~~A~~dggkaIRGGVPICfPfg~~----------- 146 (379)
+...+.|+..++. +|+|..+||+|+||++. | .|+||.++.+.|++.++||||||+|||+++.
T Consensus 6 ~~~~~~L~n~~~~~~~~~i~~~Ga~l~s~~~~----G-~~vl~~~~~~~~~~~~~~~GGip~l~P~~gr~~~~~~~y~l~ 80 (297)
T 2cir_A 6 TDKEVVLTHPADETTSVHILKYGATVYSWKLK----S-EEQLWLSTAAKLDGSKPVRGGIPLVFPVFGKNSTDEHLSKLP 80 (297)
T ss_dssp CSSEEEEEETTEEEEEEEEETBTTEEEEEEET----T-EECBCBCTTCCCSSSSCCSBSBCEEBSCSSCCSSSTTGGGSC
T ss_pred CCCEEEEeCCCCceeEEEEECCCcEEEEEEeC----C-eEEEecCcHHHhcCCCCccCCCCEEEEecCCCCCCcccCCCC
Confidence 4567888876666 89999999999999984 4 5999999989999999999999999996552
Q ss_pred -CCCcCccCcEEeeecCCCCccEEEEEeeCC----------CCCceEEEEEEEEeCCceEEEEEEEeCC-CCcchhhhhh
Q 017014 147 -GEVWSPCNWTLHDISGNPQEFIQVELISSD----------TVDMVEIRCIVTLNEASVSSELVVSNFR-SSSLQLAGSI 214 (379)
Q Consensus 147 -~~FAR~~~W~l~~~~~~~~~~v~l~L~ls~----------~~~~F~L~~~VtL~~~~L~l~L~V~Ntg-~~pf~ft~AL 214 (379)
.+|||++.|++.+...+ +.+.++|.+.+ .|+.|+++++++|.+++|+++++++|++ ++|+.|..++
T Consensus 81 ~HGfar~~~W~v~~~~~~--~~~~v~l~l~s~~~~~~~~~g~P~~~~~~vty~L~~~~L~i~~~~~N~~~d~~~~~~~~~ 158 (297)
T 2cir_A 81 QHGLARNSTWEFLGQTKE--NPPTVQFGLKPEIANPELTKLWPMDYLLILTVELGSDYLKTAIEVENTSSSKELKFNWLF 158 (297)
T ss_dssp TTBSGGGSBCEEEEEEEE--TTEEEEEEECGGGSCHHHHHHSCCCCEEEEEEEECSSEEEEEEEEECCCSSCCEEEEEEE
T ss_pred CccccCCCceEEEeeccC--CceEEEEEecCCCCCHHHHhhCCCcEEEEEEEEEcCCEEEEEEEEEcCCCCcceEEeeec
Confidence 14999999999875411 22445555554 2589999999999879999999999999 9999999999
Q ss_pred ccceecCCCCceEEecCCCCCcccCCCCCCCcccCCCCccccccccCcchhhhcccccccccccccccCCCCcchhhhhc
Q 017014 215 ISHLTVSTPEANYAVGLEGSDFFNMSPVSSNFVIIPPENSEQNNFIWSPMRFLSALGARNEKVADAAHSSFSESDEEMQR 294 (379)
Q Consensus 215 HTYf~VsDi~~v~V~GLeG~~YlDkl~~~s~f~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~q~~~~~~~~~~~~~~~ 294 (379)
|+||+++++.++.+.||+|..|+|+... . ...
T Consensus 159 H~YFnl~~~~~~~~~gv~~~~~~d~~~~-----------------------------~-------------------~~~ 190 (297)
T 2cir_A 159 HTYFRIEDIEGTMVSNLAGMKLYDQLLK-----------------------------E-------------------SYV 190 (297)
T ss_dssp CCEEECSCGGGEEEESCTTCEEEETTTT-----------------------------E-------------------EEE
T ss_pred CceEeCCCccceEEecCCCCccEeccCC-----------------------------c-------------------ccc
Confidence 9999999999999999999889997621 0 001
Q ss_pred cccCcceeecCccceEEcCCC--CeeEEecC-c-eeEEEeeCccccCCceEEEccchhhhhhcc
Q 017014 295 EENDSYKQLKEKMSRIYTSAP--TNFTIIDR-V-IFSKKFSGFLSLLSKSCIFRIHASRILRMH 354 (379)
Q Consensus 295 ~E~~~~~~~~~EvDRVY~~aP--~~~tIiD~-~-~~~~~~~~~~~~~s~~~v~~~~~~~~~~m~ 354 (379)
++ +..+.|.+++|+||...+ ..++|.|+ + ++.+...++ +..+|||||.++.+.|.
T Consensus 191 ~~-~~~~~~~~~~D~~~~~~~~~~~~~l~~~~g~~l~v~~~~~----p~~~v~t~~~~~~~~~~ 249 (297)
T 2cir_A 191 DK-HPVVTFNQETDVIYQNVSAERAIQIVDKGVQIHTLKRYNL----PDTVVWNPWIEKSQGMA 249 (297)
T ss_dssp CC-SSSBCCSSCEEEEECCCCTTCCEEEEETTEEEEEEEEESC----CEEEEEECHHHHHHHCT
T ss_pred cc-CCccccCCccceEEeCCCCCccEEEEcCCCCEEEEEecCC----CcEEEECcchhhccccc
Confidence 11 224778889999998765 56788776 2 377777776 89999999988777664
No 4
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}
Probab=99.97 E-value=2.5e-30 Score=246.85 Aligned_cols=215 Identities=12% Similarity=0.125 Sum_probs=166.4
Q ss_pred eEEEe-cCCeeeEEEEeCC-CCEEEEE-cCCeEEEEEeecccCCCcceeEEecCCCCCCCCCCcccceeEEecCCCC---
Q 017014 73 VTFED-IDGSCVAKMGFEN-GSTATLM-LPSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQGGLSSAFSCGSD--- 146 (379)
Q Consensus 73 vtf~~-~~gl~~v~L~~~~-gssA~I~-L~GAhVtSwkp~~w~~g~~elL~lS~~A~~dggkaIRGGVPICfPfg~~--- 146 (379)
+++.+ ..+...+.|++++ |.+++|. .+||+|+||++. | .|+||++..+.+++++++|||+|||||+++.
T Consensus 2 ~~~~~~~~~~~~~~l~n~~~g~~~~v~~~~Ga~l~s~~~~----g-~~~l~~~~~~~~~~~~~~~gg~Pvl~P~~gri~~ 76 (289)
T 3k25_A 2 YNISFTPDRPLTYHLEDDQSLARLSLVPGRGGLVTEWTVQ----G-QPILYFDRERFQDPSLSVRGGIPILFPICGNLPQ 76 (289)
T ss_dssp EEEEEECCBCCEEEEEETTTTEEEEEEGGGTSEEEEEEET----T-EECBCBCTTGGGSTTSCCCBSBCEEBSCSSCCGG
T ss_pred cceeeccCCceEEEEECCCCCeEEEeehhcCCEEEEEEeC----C-EEEEecChhhccCcccccCCCCCEEECCCCCCCC
Confidence 44444 4667889999886 7888887 899999999984 3 6999999888888999999999999996652
Q ss_pred --------------CCCcCccCcEEeeecCCCCccEEEEEeeCC-----CCCceEEEEEEEEeCCceEEEEEEEeCCCCc
Q 017014 147 --------------GEVWSPCNWTLHDISGNPQEFIQVELISSD-----TVDMVEIRCIVTLNEASVSSELVVSNFRSSS 207 (379)
Q Consensus 147 --------------~~FAR~~~W~l~~~~~~~~~~v~l~L~ls~-----~~~~F~L~~~VtL~~~~L~l~L~V~Ntg~~p 207 (379)
.||||++.|++.+...++...|.++|...+ .|+.|+++++++|.++.|+++++++|++++|
T Consensus 77 g~~~~~g~~y~l~~HGf~r~~~W~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~~L~i~~~~~N~~~~~ 156 (289)
T 3k25_A 77 DQFNHAGKSYRLKQHGFARDLPWEVIGQQTQDNARLDLRLSHNDATLEAFPFAFELVFSYQLQGHSLRIEQRIANLGDQR 156 (289)
T ss_dssp GEEEETTEEEECCTTBSGGGSCCEEEEEECSSSEEEEEEEECCHHHHTTSCSCEEEEEEEEEETTEEEEEEEEEECSSSC
T ss_pred CEEEECCEEeecCCCCCcccCCeEEEEecCCCCcEEEEEEecChhHHhcCCceEEEEEEEEEeCCEEEEEEEEEcCCCCc
Confidence 249999999998764332334555554332 2678999999999889999999999999999
Q ss_pred chhhhhhccceecCCCCceEEecCCCCCcccCCCCCCCcccCCCCccccccccCcchhhhcccccccccccccccCCCCc
Q 017014 208 LQLAGSIISHLTVSTPEANYAVGLEGSDFFNMSPVSSNFVIIPPENSEQNNFIWSPMRFLSALGARNEKVADAAHSSFSE 287 (379)
Q Consensus 208 f~ft~ALHTYf~VsDi~~v~V~GLeG~~YlDkl~~~s~f~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~q~~~~~~~~ 287 (379)
+.|+.++|+||+++|++++.+.|+. ..|+|+....
T Consensus 157 ~~~~~~~H~yF~~~~~~~~~~~~~~-~~~~d~~~~~-------------------------------------------- 191 (289)
T 3k25_A 157 MPFSLGFHPYFFCREKLGITLAIPA-NDYLDQKTGD-------------------------------------------- 191 (289)
T ss_dssp EEECCEECCEEECSCCTTCEEECSC-SEEEETTTCC--------------------------------------------
T ss_pred ceeEEecCcEEccCCcceEEEEcCc-ccccccccCc--------------------------------------------
Confidence 9999999999999999999999995 5788876310
Q ss_pred chhhhhccccCcceeecCccceEEcCCC-CeeEEecCc---eeEEEeeC-ccccCCceEEEccc
Q 017014 288 SDEEMQREENDSYKQLKEKMSRIYTSAP-TNFTIIDRV---IFSKKFSG-FLSLLSKSCIFRIH 346 (379)
Q Consensus 288 ~~~~~~~~E~~~~~~~~~EvDRVY~~aP-~~~tIiD~~---~~~~~~~~-~~~~~s~~~v~~~~ 346 (379)
.....+......+++||||.+.+ ..++|.|+. ++.+.+.+ | +..+||||-
T Consensus 192 -----~~~~~~~~~~~~~~~D~~~~~~~~~~~~l~~~~~~~~i~v~~~~~~----~~~vvw~~~ 246 (289)
T 3k25_A 192 -----CHGYDGQLNLTSPELDLAFTQISQPRAHFIDPDRNLKIEVSFSELY----QTLVLWTVA 246 (289)
T ss_dssp -----EEECCSCCCTTSSEEEEEECCCSSSEEEEEETTTTEEEEEEECTTC----CEEEEEEES
T ss_pred -----ccccCCcccCCchhhceEeecCCCCeEEEEECCCCCEEEEEeCCCC----cEEEEEecC
Confidence 00011111223478999999874 578888873 47887776 6 889999984
No 5
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis}
Probab=99.85 E-value=1.1e-20 Score=182.60 Aligned_cols=155 Identities=13% Similarity=0.079 Sum_probs=124.0
Q ss_pred ecCCeeeEEEEeCCCCEEEEE-cCCeEEEEEeecccCCCcceeEEecCCCCCCCCCCcccceeEEecCCC--C-------
Q 017014 77 DIDGSCVAKMGFENGSTATLM-LPSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQGGLSSAFSCGS--D------- 146 (379)
Q Consensus 77 ~~~gl~~v~L~~~~gssA~I~-L~GAhVtSwkp~~w~~g~~elL~lS~~A~~dggkaIRGGVPICfPfg~--~------- 146 (379)
..+|...+.|+.. +.+|+|. .+||+|+||+.+ +.+.|+||.++.+....+.++++|+|||||.+. +
T Consensus 10 ~~~g~~~~~L~n~-~~~~~i~p~~GA~l~s~~~~---~~g~~~l~~~~~~~~~~~~~~~~G~pv~~p~nRi~~g~~~~~G 85 (326)
T 3mwx_A 10 TYLGTPAIKAGNE-HLEMIVVPEWGSNVISLVDK---TTNVQLLREPETAESFHDTPTLYGIPILFPPNRISDGTFSFRG 85 (326)
T ss_dssp EETTEEEEEEEES-SEEEEEETTTTTEEEEEEET---TTTEECBCCCSSHHHHHHCTTSSSCCEEBSCSEEETTEEEETT
T ss_pred EECCeEEEEEECC-CEEEEEchhcCCEEEEEEec---CCCceEEccCcChhHhhcCccccCceEcCCCCcccCCEEEECC
Confidence 4578777777763 3799999 799999999986 335799999987666667899999999999531 0
Q ss_pred ----------------CCCcCccCcEEeeecCC-CCccEEEEEeeCCC-------CCceEEEEEEEEeCCceEEEEEEEe
Q 017014 147 ----------------GEVWSPCNWTLHDISGN-PQEFIQVELISSDT-------VDMVEIRCIVTLNEASVSSELVVSN 202 (379)
Q Consensus 147 ----------------~~FAR~~~W~l~~~~~~-~~~~v~l~L~ls~~-------~~~F~L~~~VtL~~~~L~l~L~V~N 202 (379)
.+|+|.+.|++.+...+ +...|+++|.+.+. |+.|+++++++|.++.|+++++++|
T Consensus 86 ~~y~l~~N~~~~~~~lHG~~~~~~W~v~~~~~~~~~~~v~~~~~~~~~~~~~~g~P~~~~~~v~y~L~~~~L~i~~~~~N 165 (326)
T 3mwx_A 86 RTYHFDINEKDKHNHLHGFLYHEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKENTLFKHATVMN 165 (326)
T ss_dssp EEEECCCCBTTTTEEESBSCTTSCCEEEEEEEESSCEEEEEEEEGGGCHHHHHHSCSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEccCCCCCCCccccCCccCCceEEEEeeccCCceEEEEEEEeCCCCccccCCCceEEEEEEEEEcCCcEEEEEEEEE
Confidence 24899999999876533 23467777777543 5789999999998899999999999
Q ss_pred CCCCcchhhhhhccceecCCCCceEEecCCCCCcc
Q 017014 203 FRSSSLQLAGSIISHLTVSTPEANYAVGLEGSDFF 237 (379)
Q Consensus 203 tg~~pf~ft~ALHTYf~VsDi~~v~V~GLeG~~Yl 237 (379)
++++|+.|..++|+||+++ +.+.++..- ...|+
T Consensus 166 ~~~~~~~~~~~~H~yFnl~-~~~~~l~~~-a~~~~ 198 (326)
T 3mwx_A 166 KGKEAFPWGIGYHTTFIFP-AESSLFSLT-ADQQW 198 (326)
T ss_dssp CSSSCEEECCEECCCEECC-TTTEEEEES-EEEEE
T ss_pred CCCCceeeEEeeccccCCC-CCCEEEEEE-CCcEE
Confidence 9999999999999999999 777777764 33455
No 6
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum}
Probab=99.84 E-value=1.8e-20 Score=182.70 Aligned_cols=159 Identities=14% Similarity=0.124 Sum_probs=124.2
Q ss_pred EEEecCCeeeEEEEeCCCCEEEEE-cCCeEEEEEeecccCCCcceeEEecCC----CCCCCCCCcccceeEEecCCC---
Q 017014 74 TFEDIDGSCVAKMGFENGSTATLM-LPSGLITSYKAHMWHGGTVELLHTIVS----EGKDGTPAIQGGLSSAFSCGS--- 145 (379)
Q Consensus 74 tf~~~~gl~~v~L~~~~gssA~I~-L~GAhVtSwkp~~w~~g~~elL~lS~~----A~~dggkaIRGGVPICfPfg~--- 145 (379)
+....+|+..+.|+.. +.+|+|. .+||+|+||+.+ +.+.|+||.++. +.|. ++++|+|+|||||.+.
T Consensus 11 ~~~~~~g~~~~~L~n~-~~~~~i~p~~Ga~l~s~~~~---~~g~~~l~~~~~~~~~~~y~-~~~~~~G~pv~~p~nRi~~ 85 (341)
T 3os7_A 11 EEIIWSEHKCIRFAAG-GYEALIIPDVGGNVVELKDT---NKGVTILRTPKKDLKFEDFK-NRPQVYGLPVLFPPNRIDD 85 (341)
T ss_dssp EEEETTTEEEEEEEET-TEEEEEETTTTTEEEEEEET---TTTEECBCCCCTTCCHHHHH-HSGGGSSCCEESSCSEEET
T ss_pred eeEEECCEEEEEEeCC-CEEEEEchhcCCEEEEEEeC---CCCCeEEEcCCcccchhhhh-hCCcccceeEeCCCCcccC
Confidence 3444678777777763 5799999 999999999986 235799999886 3565 5889999999999421
Q ss_pred ------------C----------CCCcCccCcEEeeecCCC-CccEEEEEeeCCC-------CCceEEEEEEEEeCCceE
Q 017014 146 ------------D----------GEVWSPCNWTLHDISGNP-QEFIQVELISSDT-------VDMVEIRCIVTLNEASVS 195 (379)
Q Consensus 146 ------------~----------~~FAR~~~W~l~~~~~~~-~~~v~l~L~ls~~-------~~~F~L~~~VtL~~~~L~ 195 (379)
. .+|+|...|++.....++ ...|+++|.+.+. |+.|+++++++|.++.|+
T Consensus 86 g~f~~~G~~y~l~~N~~~~~~~lHG~~~~~~W~v~~~~~~~~~~~v~~~~~~~d~~~~~~g~P~~~~~~v~y~L~~~~L~ 165 (341)
T 3os7_A 86 GTFKLGDKTYKFPINEAKNNNYIHGFIKNSKWTVHKKKIDQDKALVEVVFDFTKENEAYKYFSHEFQFKLSYELSSKGLK 165 (341)
T ss_dssp TEEEETTEEEECCCSBTTTTEEESCSGGGSCCEEEEEEEETTEEEEEEEEEECTTSTTTTTSCCCEEEEEEEEEETTEEE
T ss_pred CEEEECCEEEEccCCCCCCCcCccCCcccCcEEEEEeecCCCccEEEEEEEeCCCcchhhcCCceEEEEEEEEEeCCeEE
Confidence 0 248999999998765322 2256667766543 468899999999888999
Q ss_pred EEEEEEeCCCCcchhhhhhccceecC-----CCCceEEecCCCCCccc
Q 017014 196 SELVVSNFRSSSLQLAGSIISHLTVS-----TPEANYAVGLEGSDFFN 238 (379)
Q Consensus 196 l~L~V~Ntg~~pf~ft~ALHTYf~Vs-----Di~~v~V~GLeG~~YlD 238 (379)
++++++|++++|+.|..++|+||+++ ++.+.++.. ....|+.
T Consensus 166 i~~~~~N~~~~~~p~~~~~H~yF~l~~~~~~~~~~~~l~~-~a~~~~~ 212 (341)
T 3os7_A 166 QTTSVVNLSSEEMPLSVGYHSAFNVPFIEGSEDSNCRVKI-SIDKFWK 212 (341)
T ss_dssp EEEEEEECSSSCEEECCEECCEEESSCBTTCCGGGEEEEE-CEEEEEE
T ss_pred EEEEEEeCCCCcEEEEEecCceeecCCCCCCCcccEEEEE-eCCcEEe
Confidence 99999999999999999999999998 677888775 4556664
No 7
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli}
Probab=99.84 E-value=6.4e-20 Score=175.73 Aligned_cols=142 Identities=11% Similarity=0.030 Sum_probs=113.3
Q ss_pred eeeEEEEeCCCCEEEEEcC-CeEEEEEeecccCCCcceeEEecCCCCCCCCCCcccceeEEecCCCC-------------
Q 017014 81 SCVAKMGFENGSTATLMLP-SGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQGGLSSAFSCGSD------------- 146 (379)
Q Consensus 81 l~~v~L~~~~gssA~I~L~-GAhVtSwkp~~w~~g~~elL~lS~~A~~dggkaIRGGVPICfPfg~~------------- 146 (379)
..++.|+.. +.+|+|..+ ||+|+|| . ++.|+||.++ +. ++++|||+|+|||+++.
T Consensus 2 ~~~~~l~n~-~~~~~i~~~~Ga~l~s~-~-----~g~~vl~~~~-~~---~~~~~~~g~~l~p~~nRi~~g~~~~~G~~y 70 (291)
T 3nre_A 2 MTIYTLSHG-SLKLDVSDQGGVIEGFW-R-----DTTPLLRPGK-KS---GVATDASCFPLVPFANRVSGNRFVWQGREY 70 (291)
T ss_dssp CCEEEEEET-TEEEEEETBTTEEEEEE-E-----TTEESSCCCC-CS---SCGGGSSEEEEBSCCSBCGGGEEEETTEEE
T ss_pred ccEEEEcCC-CEEEEEEcccCceEEEE-e-----CCCEEEECCC-cc---cCccccCCcEEEeeCCEecCCEEEECCEEE
Confidence 345666653 589999997 9999999 4 2479999987 32 68899999999996541
Q ss_pred -------------CCCcCccCcEEeeecCCCCccEEEEEeeCCCCCceEEEEEEEEeCCceEEEEEEEeCCCCcchhhhh
Q 017014 147 -------------GEVWSPCNWTLHDISGNPQEFIQVELISSDTVDMVEIRCIVTLNEASVSSELVVSNFRSSSLQLAGS 213 (379)
Q Consensus 147 -------------~~FAR~~~W~l~~~~~~~~~~v~l~L~ls~~~~~F~L~~~VtL~~~~L~l~L~V~Ntg~~pf~ft~A 213 (379)
.+|+|.+.|++.+.. ++.|.++|.....|+.|+++++++|.++.|+++++++|++++|+.|..+
T Consensus 71 ~l~~N~~~~~~~~HG~~~~~~W~~~~~~---~~~v~l~l~~~~~P~~~~~~v~y~L~~~~L~i~~~~~N~~~~~~~~~~~ 147 (291)
T 3nre_A 71 QLQPNVEWDAHYLHGDGWLGEWQCVSHS---DDSLCLVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTG 147 (291)
T ss_dssp ECCCCSTTCSSCBSBSGGGSBCEEEEEC---SSEEEEEEEEESSSCEEEEEEEEEECSSEEEEEEEEEECSSSCEEECCE
T ss_pred ECCCCCCCCCCCCCCchhcceeEEEEcc---CCEEEEEEeCCCCCceEEEEEEEEEeCCeEEEEEEEEECCCCCccceEE
Confidence 138999999997754 2467777765335678888888899889999999999999999999999
Q ss_pred hccceecCCCCceEEecCCCCCcccC
Q 017014 214 IISHLTVSTPEANYAVGLEGSDFFNM 239 (379)
Q Consensus 214 LHTYf~VsDi~~v~V~GLeG~~YlDk 239 (379)
+|+||++++...++|. +..|++.
T Consensus 148 ~H~YFnl~~~~~l~i~---a~~~~~~ 170 (291)
T 3nre_A 148 WHPYFPLSPQTRIQAQ---ASGYWLE 170 (291)
T ss_dssp EEEEEECCTTCEEEEC---CSEEEEE
T ss_pred cCccEecCCCeEEEEE---CCEEEEc
Confidence 9999999997777776 4567764
No 8
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}
Probab=99.79 E-value=1.6e-18 Score=168.20 Aligned_cols=151 Identities=11% Similarity=0.084 Sum_probs=119.3
Q ss_pred CeeeEEEEeCCCCEEEEEcCCeEEEEEeecccCCCcceeEE-ecCCCCCCCCCCcccceeEEecCCC---------C---
Q 017014 80 GSCVAKMGFENGSTATLMLPSGLITSYKAHMWHGGTVELLH-TIVSEGKDGTPAIQGGLSSAFSCGS---------D--- 146 (379)
Q Consensus 80 gl~~v~L~~~~gssA~I~L~GAhVtSwkp~~w~~g~~elL~-lS~~A~~dggkaIRGGVPICfPfg~---------~--- 146 (379)
+...+.|+..++.+|+|..+||+|+||+.. | .|+|| .+..+.|.+..+++|+|+. |+.+ +
T Consensus 9 ~~~~~~l~n~~~~~~~i~~~GA~l~s~~~~----g-~~vl~~~~~~~~y~~~~~~~G~~l~--p~~nRi~~g~f~~~G~~ 81 (342)
T 1yga_A 9 KYGVITIGDEKKFQATIAPLGATLVDLKVN----G-QSVVQGYSNVQDYLTDGNMMGATVG--RYANRIAKGVFSLDDGP 81 (342)
T ss_dssp TTCCEEEEETTTEEEEEETBTTEEEEEEET----T-EECBCCCSSGGGGTTCSSCTTCEEC--SBCSEEGGGEEEETTEE
T ss_pred eEEEEEEECCCCEEEEEECCCCEEEEEEEC----C-eeEEecCCChHHhccCCCeEccEEC--CCCCceeCCEEEECCEE
Confidence 345677777667899999999999999985 4 57554 8888889888899988554 5333 0
Q ss_pred ------------CCCc---CccCcEEeeecCC--CCccEEEEEeeCC-------CCCceEEEEEEEEeC--CceEEEEEE
Q 017014 147 ------------GEVW---SPCNWTLHDISGN--PQEFIQVELISSD-------TVDMVEIRCIVTLNE--ASVSSELVV 200 (379)
Q Consensus 147 ------------~~FA---R~~~W~l~~~~~~--~~~~v~l~L~ls~-------~~~~F~L~~~VtL~~--~~L~l~L~V 200 (379)
.+|+ |.+.|++...... .++.|.++|.+.+ .|+.|+++++++|.+ +.|++++++
T Consensus 82 y~l~~n~~~~~lHG~~~g~~~~~W~v~~~~~~~~~~~~v~l~l~~~~~~~g~~~yP~~~~~~vty~L~~~~~~L~i~~~~ 161 (342)
T 1yga_A 82 HKLTVNNCGNTNHSSISSLNLKQYKASPVENPSKGVYVVEFKLLDDHTQPNPNEFPGDLEVTVKYTLNVAEMTLDMEYQA 161 (342)
T ss_dssp EECCCCBTTBEETTGGGCGGGSBCEECCCEEEETTEEEEEEEEEECSSSSSCCCSSSEEEEEEEEEEETTTTEEEEEEEE
T ss_pred EEcCCCCCCcccCCCccccCcceeeeEEeeccCCCCCEEEEEEECCcccCCCcCCCeEEEEEEEEEEeCCCCEEEEEEEE
Confidence 2477 6999999764221 2346777777643 356789999999973 799999999
Q ss_pred EeCCCCcchhhhhhccceecC------CCCceEEecCCCCCccc
Q 017014 201 SNFRSSSLQLAGSIISHLTVS------TPEANYAVGLEGSDFFN 238 (379)
Q Consensus 201 ~Ntg~~pf~ft~ALHTYf~Vs------Di~~v~V~GLeG~~YlD 238 (379)
+|++++|+.|..++|+||+++ ++.+.+|. |.+..|++
T Consensus 162 ~N~~d~~~p~~~~~H~YFnl~~~~~~~~i~~~~l~-l~a~~~~~ 204 (342)
T 1yga_A 162 QLVRGDATPINMTNHSYFNLNKVKSEKSIRGTEVK-VCSNKSLE 204 (342)
T ss_dssp EEEESSEEECBCEECCCBCTTTTTCTTCCTTEEEE-ESCCEEEE
T ss_pred EeCCCCceEEeeeccceEEcCCCCCCCcccceEEE-EeCCeEEE
Confidence 999999999999999999998 68899999 99989997
No 9
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=99.68 E-value=2.1e-16 Score=152.62 Aligned_cols=124 Identities=14% Similarity=0.057 Sum_probs=99.9
Q ss_pred EeCCC-CEEEEEcCCeEEEEEeecccCCCcceeEEecCCCCCCCCCCcccceeEEecCCCC-----------------CC
Q 017014 87 GFENG-STATLMLPSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQGGLSSAFSCGSD-----------------GE 148 (379)
Q Consensus 87 ~~~~g-ssA~I~L~GAhVtSwkp~~w~~g~~elL~lS~~A~~dggkaIRGGVPICfPfg~~-----------------~~ 148 (379)
++.|+ .+|+|..+||+|+||+.+ .++.|+||.++.+.+ .||+|||||+++. .|
T Consensus 4 ~l~n~~~~~~i~~~GA~l~s~~~~---~~~~e~l~~~~~~~~------~~~~pil~P~~nRi~~g~~~~~G~~y~l~~HG 74 (307)
T 3dcd_A 4 TIENNMIKVVISDHGAEIQSVKSA---HTDEEFMWQANPEIW------GRHAPVLFPIVGRLKNDEYTYKGKTYHLGQHG 74 (307)
T ss_dssp EEECSSEEEEEETBTTEEEEEEET---TTCCBCBCCCCTTTC------CCSSCEEBSCSSCCGGGEEEETTEEEECCTTB
T ss_pred EEECCCEEEEEEccCcEEEEEEEC---CCCcEEEECCChhhc------CCCCcEEEeecCccCCCeEEECCEEEecCCCC
Confidence 34444 799999999999999975 356899998765544 3579999996552 13
Q ss_pred CcCccCcEEeeecCCCCccEEEEEeeCC-----CCCceEEEEEEEEeCCceEEEEEEEeCCCCcchhhhhhccceecCC
Q 017014 149 VWSPCNWTLHDISGNPQEFIQVELISSD-----TVDMVEIRCIVTLNEASVSSELVVSNFRSSSLQLAGSIISHLTVST 222 (379)
Q Consensus 149 FAR~~~W~l~~~~~~~~~~v~l~L~ls~-----~~~~F~L~~~VtL~~~~L~l~L~V~Ntg~~pf~ft~ALHTYf~VsD 222 (379)
|+|++.|++.+.. ++.|.++|...+ .|+.|+++++++|.++.|+++++++|+|++|+.|..++|+||+++.
T Consensus 75 f~r~~~w~v~~~~---~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~~~~L~i~~~v~N~g~~~~p~~~g~HpyF~~~~ 150 (307)
T 3dcd_A 75 FARNADFEVENHT---KESITFLLKDNEETRKVYPFKFEFRVNYNLMNNLLEENFSVVNKSDETMIFGVGGHPGFNLPT 150 (307)
T ss_dssp SGGGSBCEEEEEE---TTEEEEEEECCHHHHHHSCCCEEEEEEEEEETTEEEEEEEEEECSSSCEEECEEECCEEECCC
T ss_pred CccCcEEEEEEec---CCEEEEEEecCcchhhhCCCceEEEEEEEEeCCEEEEEEEEECCCCCcEeEEEEcCcEEEcCC
Confidence 9999999997754 246667666542 2678999999999889999999999999999999999999999974
No 10
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=99.68 E-value=2.9e-16 Score=150.25 Aligned_cols=127 Identities=12% Similarity=0.018 Sum_probs=101.2
Q ss_pred eEEEEeCCCCEEEEEcCCeEEEEEeecccCCCcceeEEecCCCCCCCCCCcccceeEEecCCCC----------------
Q 017014 83 VAKMGFENGSTATLMLPSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQGGLSSAFSCGSD---------------- 146 (379)
Q Consensus 83 ~v~L~~~~gssA~I~L~GAhVtSwkp~~w~~g~~elL~lS~~A~~dggkaIRGGVPICfPfg~~---------------- 146 (379)
++.|+. .+.+|+|..+||+|+||+.+ +++.|+||.++.+.+ .||.|+|||+++.
T Consensus 2 ~~~l~n-~~~~~~i~~~Ga~l~s~~~~---~~g~e~l~~~~~~~~------~~~~p~l~P~~~Ri~~g~~~~~G~~y~l~ 71 (294)
T 3q1n_A 2 MITIEN-SKFKAGIAERGAELQSLVNK---ADNYEYVWTGDKTFW------NRHAPILFPSIGKSNQDQYRLGAKTYPMS 71 (294)
T ss_dssp EEEEEC-SSEEEEEETBTTEEEEEEET---TTTEECBCCCCTTTC------SCSCCEEBSCCSCCGGGEEEETTEEEECC
T ss_pred EEEEEC-CCEEEEEEccCcEEEEEEeC---CCCCEEEEcCChhhc------cCCCCEEEeccCCcCCCEEEECCcEEccC
Confidence 455554 24799999999999999985 245799998875544 3468999997652
Q ss_pred -CCCcCccCcEEeeecCCCCccEEEEEeeCC-----CCCceEEEEEEEEeCCceEEEEEEEeCCCCcchhhhhhccceec
Q 017014 147 -GEVWSPCNWTLHDISGNPQEFIQVELISSD-----TVDMVEIRCIVTLNEASVSSELVVSNFRSSSLQLAGSIISHLTV 220 (379)
Q Consensus 147 -~~FAR~~~W~l~~~~~~~~~~v~l~L~ls~-----~~~~F~L~~~VtL~~~~L~l~L~V~Ntg~~pf~ft~ALHTYf~V 220 (379)
.+|+|...|++.+.. ++.|.++|...+ .|+.|+++++++|.++.|+++++++|++++|+.|..++|+||++
T Consensus 72 ~HGf~r~~~w~~~~~~---~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~~~~L~i~~~~~N~~~~~~p~~~~~H~yFnl 148 (294)
T 3q1n_A 72 QHGFARDYDFDVSDKS---DSAVTFTQHQNAETLKKFPFEYTLAVTYMLTDGGLSVHYTVTNDDSKSMPFALGFHPAFNV 148 (294)
T ss_dssp TTBSGGGSBCEEESCC---SSEEEEEEECCHHHHHHSCCCEEEEEEEEEETTEEEEEEEEEECSSSCEEECEEECCEEEC
T ss_pred CCCCccCcceEEEEcc---CCEEEEEEEcCcchhhcCCeEEEEEEEEEEeCCEEEEEEEEEcCCCCceeeeEecCcEEEc
Confidence 139999999997643 346777776543 25789999999998899999999999999999999999999999
Q ss_pred CC
Q 017014 221 ST 222 (379)
Q Consensus 221 sD 222 (379)
+.
T Consensus 149 ~~ 150 (294)
T 3q1n_A 149 GL 150 (294)
T ss_dssp CB
T ss_pred CC
Confidence 73
No 11
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*
Probab=99.65 E-value=2.3e-15 Score=146.72 Aligned_cols=150 Identities=13% Similarity=0.093 Sum_probs=114.8
Q ss_pred eeeEEEEeCC-CCEEEEEcCCeEEEEEeecccCCCc-ceeEE-ecCCCCCCCCCCcccceeEEecCCCC-----------
Q 017014 81 SCVAKMGFEN-GSTATLMLPSGLITSYKAHMWHGGT-VELLH-TIVSEGKDGTPAIQGGLSSAFSCGSD----------- 146 (379)
Q Consensus 81 l~~v~L~~~~-gssA~I~L~GAhVtSwkp~~w~~g~-~elL~-lS~~A~~dggkaIRGGVPICfPfg~~----------- 146 (379)
.++..+++.| +.+|+|..+||+|+||+.+.- +|. .|+|| .+..+.|.+..+++|. +|||+.+.
T Consensus 19 ~~~~~~~L~n~~~~~~i~~~GA~l~s~~~~~~-~G~~~~vv~g~~~~~~y~~~~~~~G~--~l~p~~nRi~~g~f~~~G~ 95 (344)
T 1snz_A 19 GTVEKFQLQSDLLRVDIISWGCTITALEVKDR-QGRASDVVLGFAELEGYLQKQPYFGA--VIGRVANRIAKGTFKVDGK 95 (344)
T ss_dssp EEEEEEEEECSSCEEEEETBTTEEEEEEEECT-TSCEEECBCCCSSHHHHHSSCSCTTC--EECSBCSEEGGGEEEETTE
T ss_pred cEEEEEEEEcCCEEEEEecCCcEEEEEEecCC-CCCEeeEEECCCChHHHhhCCCceee--EecCcCCcccCCEEEECCE
Confidence 3444444444 589999999999999997521 232 48877 7777777778889974 79996551
Q ss_pred -------------CCCcC---ccCcEEeeecCCCCccEEEEEeeCCC----CCceEEEEEEEEeCCceEEEEEEEeCCCC
Q 017014 147 -------------GEVWS---PCNWTLHDISGNPQEFIQVELISSDT----VDMVEIRCIVTLNEASVSSELVVSNFRSS 206 (379)
Q Consensus 147 -------------~~FAR---~~~W~l~~~~~~~~~~v~l~L~ls~~----~~~F~L~~~VtL~~~~L~l~L~V~Ntg~~ 206 (379)
.+|+| .+.|++.... +.|.++|.+.+. |+.|+++++.+|.+++|+++++++| ++
T Consensus 96 ~y~L~~N~~~~~lHG~~~g~~~~~W~v~~~~----~~v~l~l~~~~~~~gyP~~~~~~vty~L~~~~L~i~~~a~~--d~ 169 (344)
T 1snz_A 96 EYHLAINKEPNSLHGGVRGFDKVLWTPRVLS----NGVQFSRISPDGEEGYPGELKVWVTYTLDGGELIVNYRAQA--SQ 169 (344)
T ss_dssp EEECCCTBTTBEETTSSSCGGGSBCEEEEET----TEEEEEEEECTTGGGCCSCEEEEEEEEEETTEEEEEEEEEE--SS
T ss_pred EEECCCCCCCcccCCCccccccceeeEEEeC----CEEEEEEECCCcCCCCCEEEEEEEEEEEcCCEEEEEEEEEe--CC
Confidence 23785 9999997653 357777776553 5789999999998779999999998 88
Q ss_pred cchhhhhhccceecCC-----CCceEEecCCCCCcccCC
Q 017014 207 SLQLAGSIISHLTVST-----PEANYAVGLEGSDFFNMS 240 (379)
Q Consensus 207 pf~ft~ALHTYf~VsD-----i~~v~V~GLeG~~YlDkl 240 (379)
|+.|..++|+||+++. +.+.++. +....|++..
T Consensus 170 ~~p~~~~~H~YFnl~~~~~~~i~~~~L~-i~a~~~~~~d 207 (344)
T 1snz_A 170 ATPVNLTNHSYFNLAGQASPNINDHEVT-IEADTYLPVD 207 (344)
T ss_dssp CEECBCEECCCBCTTCTTCSCCTTCEEE-ECEEEECCBC
T ss_pred ceEEeccccceEecCCCCCCcccCEEEE-EECCeEEEeC
Confidence 9999999999999984 7777777 7777888654
No 12
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4
Probab=99.24 E-value=5e-11 Score=116.21 Aligned_cols=149 Identities=13% Similarity=0.101 Sum_probs=110.0
Q ss_pred eeEEEEeCCCCEEEEEcCCeEEEEEeecccCCCc-ceeEEecCC-CCCCCCCCcccceeEEec---------CCC-----
Q 017014 82 CVAKMGFENGSTATLMLPSGLITSYKAHMWHGGT-VELLHTIVS-EGKDGTPAIQGGLSSAFS---------CGS----- 145 (379)
Q Consensus 82 ~~v~L~~~~gssA~I~L~GAhVtSwkp~~w~~g~-~elL~lS~~-A~~dggkaIRGGVPICfP---------fg~----- 145 (379)
..+.| ..++.+|+|..+||.|+||+.+. .+|+ .|+||--+. +.|....+.+|+|..+|+ +.+
T Consensus 14 ~~~~L-~~~~~~~~i~~~GA~l~sl~~~d-~~G~~~dvvl~~~~~~~y~~~~~~~G~~lgp~anRI~~g~f~~~G~~y~L 91 (339)
T 1lur_A 14 FIEIA-NKQGLTATLLPFGATLAKLTFPD-KNGKNQDLVLGFDTIDEFEKDAASIGKTVGRVANRIKNSTLHFDGKQYTM 91 (339)
T ss_dssp CEEEE-CSSSCEEEEETBTTEEEEEEEEC-TTSCEEECBCCCSSHHHHHHCSSCTTCEECSBCSEEGGGEEEETTEEEEC
T ss_pred EEEEE-eCCCEEEEEecCCcEEEEEEEEC-CCCCEeEEEEcCCChHHhccCCCccccEecCcCCeecCCEEEECCEEEEC
Confidence 35556 33458999999999999998742 1232 688887544 446667788998888775 112
Q ss_pred --C------CCCc---CccCcEEeeecCCCCccEEEEEeeCC----CCCceEEEEEEEEe-CCceEEEEEEEeCCCCcch
Q 017014 146 --D------GEVW---SPCNWTLHDISGNPQEFIQVELISSD----TVDMVEIRCIVTLN-EASVSSELVVSNFRSSSLQ 209 (379)
Q Consensus 146 --~------~~FA---R~~~W~l~~~~~~~~~~v~l~L~ls~----~~~~F~L~~~VtL~-~~~L~l~L~V~Ntg~~pf~ 209 (379)
+ .+|+ |.+.|++.... ++.|+++|...+ .|..|+++++.+|. +++|++++++ ++++++.
T Consensus 92 ~~N~~~n~lHGg~~g~~~~~W~v~~~~---~~~v~l~l~s~d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a--~~d~~tp 166 (339)
T 1lur_A 92 TPNNGPHYLHGGPNGLGYRKWEVVRHA---PESVSFSVRANEQDDGLPGDAKIDVTYTVNDRNQLIIEHHA--TCDTPGL 166 (339)
T ss_dssp CCSBTTBEETTCTTSGGGSBCEEEEEE---TTEEEEEEEEEHHHHSSSSEEEEEEEEEECTTSEEEEEEEE--ECSSCEE
T ss_pred CCCCCCcccCCCCcccccceeeEEEcc---CCEEEEEEECCCcCCCCCeEEEEEEEEEECCCCeEEEEEEE--eCCCCeE
Confidence 0 1377 59999997653 246777776644 35788888889996 5789999999 5789999
Q ss_pred hhhhhccceecCC---CCceEEecCCCCCccc
Q 017014 210 LAGSIISHLTVST---PEANYAVGLEGSDFFN 238 (379)
Q Consensus 210 ft~ALHTYf~VsD---i~~v~V~GLeG~~YlD 238 (379)
|.-+.|+||+++. +.+..+. +....|++
T Consensus 167 ~~lg~HpYFnl~~~~~i~~~~L~-i~a~~~~~ 197 (339)
T 1lur_A 167 LALTNHAYWNLDGSDTVAEHFLE-MEADEFVE 197 (339)
T ss_dssp CBCEECCEECSSCCSCSTTCEEE-ECEEEEEE
T ss_pred EeeeccceEECCCCCcccCEEEE-EECCEEEE
Confidence 9999999999984 6777776 77777775
No 13
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*
Probab=98.85 E-value=1.2e-08 Score=100.03 Aligned_cols=133 Identities=11% Similarity=0.078 Sum_probs=95.6
Q ss_pred eeeEEEEeCCCCEEEEEcCCeEEEEEeecccCCCcceeEEecCC-CCCCCCCCcccceeEEecCCC---------C----
Q 017014 81 SCVAKMGFENGSTATLMLPSGLITSYKAHMWHGGTVELLHTIVS-EGKDGTPAIQGGLSSAFSCGS---------D---- 146 (379)
Q Consensus 81 l~~v~L~~~~gssA~I~L~GAhVtSwkp~~w~~g~~elL~lS~~-A~~dggkaIRGGVPICfPfg~---------~---- 146 (379)
...+.|+..++.+|+|.-+||.|+||+. +| .++||--+. +.|....+.+| |+++|+.+ +
T Consensus 12 ~~~~tL~n~~~~~v~i~~~GA~l~sl~~----~G-~~vvlg~~~~~~y~~~~~~~G--~~lgp~anRI~~g~f~~~G~~y 84 (347)
T 1nsx_A 12 SDLISLTNKAGVTISFTNLGARIVDWQK----DG-KHLILGFDSAKEYLEKDAYPG--ATVGPTAGRIKDGLVKISGKDY 84 (347)
T ss_dssp EEEEEEECTTSCEEEEETBTTEEEEEEE----TT-EESBCCCSSHHHHHHTCSCTT--CEECSBCSEEGGGEEEETTEEE
T ss_pred eEEEEEECCCceEEEEEccCcEEEEEEE----CC-eEEEEeCCCHHHHhhCCCeEe--eEEcccCCcccCCEEEECCEEE
Confidence 3456666655689999999999999993 34 556664333 44544556777 68888654 1
Q ss_pred -----------CCCc---CccCcEEeeecCCCCccEEEEEeeCCC----CCceEEEEEEEEe-CCceEEEEEEEeCCCCc
Q 017014 147 -----------GEVW---SPCNWTLHDISGNPQEFIQVELISSDT----VDMVEIRCIVTLN-EASVSSELVVSNFRSSS 207 (379)
Q Consensus 147 -----------~~FA---R~~~W~l~~~~~~~~~~v~l~L~ls~~----~~~F~L~~~VtL~-~~~L~l~L~V~Ntg~~p 207 (379)
.+++ |.+.|++.....+....|.++|...+. |..|+++++.+|. ++.|+++++++ ++++
T Consensus 85 ~L~~N~~~n~lHGg~~g~~~~~W~v~~~~~~~~~~v~l~l~s~d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~--~d~~ 162 (347)
T 1nsx_A 85 ILNQNEGPQTLHGGEESIHTKLWTYEVTDLGAEVQVKFSLVSNDGTNGYPGKIEMSVTHSFDDDNKWKIHYEAI--SDKD 162 (347)
T ss_dssp ECCCCBTTBEETTSTTCGGGSBCEEEEEECSSEEEEEEEEEECTTGGGCCSCEEEEEEEEEETTSEEEEEEEEE--ESSC
T ss_pred EccCCCCCcccCCCCcccccceEEEEEccCCcceEEEEEEECCCccCCCCeEEEEEEEEEECCCCeEEEEEEEE--cCCC
Confidence 1266 999999976532111156677665542 4678888888897 57999999998 7899
Q ss_pred chhhhhhccceecCC
Q 017014 208 LQLAGSIISHLTVST 222 (379)
Q Consensus 208 f~ft~ALHTYf~VsD 222 (379)
..|.-..|+||.++.
T Consensus 163 tp~nlg~HpYFnl~g 177 (347)
T 1nsx_A 163 TVFNPTGNVYFNLNG 177 (347)
T ss_dssp EECBCEECCEECTTS
T ss_pred eEEeeeccceEecCC
Confidence 999999999999973
No 14
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=98.85 E-value=5.5e-09 Score=108.93 Aligned_cols=148 Identities=13% Similarity=0.023 Sum_probs=100.7
Q ss_pred EEEEeCCC--CEEEEEcCCeEEEEEeecccCCCcceeEEe-cCCCCCCC-CCCcccceeEEecCCC---------C----
Q 017014 84 AKMGFENG--STATLMLPSGLITSYKAHMWHGGTVELLHT-IVSEGKDG-TPAIQGGLSSAFSCGS---------D---- 146 (379)
Q Consensus 84 v~L~~~~g--ssA~I~L~GAhVtSwkp~~w~~g~~elL~l-S~~A~~dg-gkaIRGGVPICfPfg~---------~---- 146 (379)
-.+++.|+ .+|+|..+||.|+||+.. | .|+||- ...+.|.. ..+..| ++++|+.+ +
T Consensus 374 ~~~~l~n~~~~~~~i~~~Ga~l~s~~~~----g-~~~v~~~~~~~~y~~~~~~~~g--~~l~~~~nRi~~g~f~~~G~~y 446 (699)
T 1z45_A 374 RFVTIGAGTRFQATFANLGASIVDLKVN----G-QSVVLGYENEEGYLNPDSAYIG--ATIGRYANRISKGKFSLCNKDY 446 (699)
T ss_dssp EEEEESTTSSEEEEEESBTTCEEEEEET----T-EECBCCCSSHHHHTCTTCCCTT--CEECSBCSEEGGGEEEETTEEE
T ss_pred EEEEEECCCceEEEEEccCeEEEEEeec----C-ceEEECCCCHHHHhhcCCCccc--cccCcccCeecCcEEEECCEEE
Confidence 34455554 699999999999999874 3 477764 33344544 355444 34456442 0
Q ss_pred -----------CCCc---CccCcEEeeecCCCCc--cEEEEEeeCC----CCCceEEEEEEEEe--CCceEEEEEEEeCC
Q 017014 147 -----------GEVW---SPCNWTLHDISGNPQE--FIQVELISSD----TVDMVEIRCIVTLN--EASVSSELVVSNFR 204 (379)
Q Consensus 147 -----------~~FA---R~~~W~l~~~~~~~~~--~v~l~L~ls~----~~~~F~L~~~VtL~--~~~L~l~L~V~Ntg 204 (379)
.+|+ +...|++......+++ .+.++|...+ .|..|+++++.+|. ++.|+++++++|++
T Consensus 447 ~l~~n~~~~~lHG~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~gyP~~~~~~v~y~L~~~~~~L~i~~~~~n~~ 526 (699)
T 1z45_A 447 QLTVNNGVNANHSSIGSFHRKRFLGPIIQNPSKDVFTAEYMLIDNEKDTEFPGDLLVTIQYTVNVAQKSLEIVYKGKLTA 526 (699)
T ss_dssp ECCCCBTTBEETTGGGCGGGSBCEEEEEEEEETTEEEEEEEEEECGGGSSSSSEEEEEEEEEEETTTTEEEEEEEEEEEE
T ss_pred EccCCCCCcccCCCccccceeecceeeeccCCCCcceEEEEEECCCcCCCCCceEEEEEEEEEecCCCEEEEEEEEEecC
Confidence 2367 4889998433221223 3444544432 25678888888898 78999999999999
Q ss_pred CCcchhhhhhccceecC-----CCCceEEecCCCCCcccC
Q 017014 205 SSSLQLAGSIISHLTVS-----TPEANYAVGLEGSDFFNM 239 (379)
Q Consensus 205 ~~pf~ft~ALHTYf~Vs-----Di~~v~V~GLeG~~YlDk 239 (379)
+++..|.-..|+||.++ ++.+..+ .+....|++.
T Consensus 527 ~~~~p~~~~~H~yFnl~~~~~~~~~~~~l-~~~a~~~~~~ 565 (699)
T 1z45_A 527 GEATPINLTNHSYFNLNKPYGDTIEGTEI-MVRSKKSVDV 565 (699)
T ss_dssp SSEEECBCEECCEECTTTTSCSSSTTEEE-EESCCEEEEE
T ss_pred CCCceecccccceEeecCCCCCCccccEE-EEecCeEEec
Confidence 99999999999999998 4566555 5666677754
No 15
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus}
Probab=98.77 E-value=9.8e-08 Score=93.83 Aligned_cols=138 Identities=10% Similarity=0.127 Sum_probs=96.2
Q ss_pred CCeeeEEEEeCC--CCEEEEEcCCeEEEEEeecccCCCcceeEEecCC-CCCCCCCCcccceeEEecCCCC---------
Q 017014 79 DGSCVAKMGFEN--GSTATLMLPSGLITSYKAHMWHGGTVELLHTIVS-EGKDGTPAIQGGLSSAFSCGSD--------- 146 (379)
Q Consensus 79 ~gl~~v~L~~~~--gssA~I~L~GAhVtSwkp~~w~~g~~elL~lS~~-A~~dggkaIRGGVPICfPfg~~--------- 146 (379)
+|..+..+++.| |-+|+|.-+||.|+||+-+ + .|+||--+. +.|....+..| ++++|+.+.
T Consensus 14 ~g~~v~~~tL~n~~g~~v~i~~~GA~l~sl~~~----~-~dvvlg~~~~~~y~~~~~~~G--~~lgp~anRI~~g~f~~~ 86 (338)
T 3imh_A 14 DNKDLCEITLENDAGMAVKVLNYGATLEKVLLD----G-ENMILSLNSPEDYSKERNFLG--GTVGRIAGRVRAGQWKHG 86 (338)
T ss_dssp TTEEEEEEEEECSSSEEEEEETBTTEEEEEEET----T-EECBCCCSSGGGGGTSCCCTT--CEECSBCSEEGGGEEEET
T ss_pred CCeEEEEEEEECCCcEEEEEecCCcEEEEEEEC----C-EEEEecCCChHHhccCCCeEe--eEEEeeCCEecCCEEEEC
Confidence 454454455544 5699999999999999875 3 788875433 44544455555 477776441
Q ss_pred ---------------CCCc--CccCcEEeeecCCCCccEEEEEeeCCC----CCceEEEEEEEEeC-CceEEEEEEEeCC
Q 017014 147 ---------------GEVW--SPCNWTLHDISGNPQEFIQVELISSDT----VDMVEIRCIVTLNE-ASVSSELVVSNFR 204 (379)
Q Consensus 147 ---------------~~FA--R~~~W~l~~~~~~~~~~v~l~L~ls~~----~~~F~L~~~VtL~~-~~L~l~L~V~Ntg 204 (379)
.+++ |.+.|++.......++.|.++|...+. |..|+++++.+|.+ ++|+++++++ +
T Consensus 87 G~~y~L~~N~g~n~LHGg~g~~~~~W~v~~~~~~~~~~v~l~l~s~d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~--~ 164 (338)
T 3imh_A 87 NEIHQLPLNDGDNHIHGGIGTDMHVWDFRPSCDSEHARVDLTLFDPDGNNDYPGNLKLHARYELDNENNLHYLLEAV--S 164 (338)
T ss_dssp TEEEECCCCBTTBEETTSSCGGGSBCEEEEEECSSEEEEEEEEEECTTGGGCCSCEEEEEEEEEETTSEEEEEEEEE--E
T ss_pred CEEEECCCCCCCcCCCCCCCcCCceEEEEeeeecCCCEEEEEEECCccccCCCeEEEEEEEEEEecCCeEEEEEEEe--c
Confidence 1367 889999965333333467777765432 46788888888875 5799999998 7
Q ss_pred CCcchhhhhhccceecC-CCCc
Q 017014 205 SSSLQLAGSIISHLTVS-TPEA 225 (379)
Q Consensus 205 ~~pf~ft~ALHTYf~Vs-Di~~ 225 (379)
+++..|.-..|+||.++ ++.+
T Consensus 165 d~~tp~nlg~HpYFnL~g~i~~ 186 (338)
T 3imh_A 165 DKLTIFNPVNHTYFNLGERAED 186 (338)
T ss_dssp SSSEECBCEECCEECTTSCGGG
T ss_pred CCCeEEEEeeCCEEeCCCCcCC
Confidence 88999999999999988 3443
No 16
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp}
Probab=98.26 E-value=5e-06 Score=82.80 Aligned_cols=138 Identities=12% Similarity=0.050 Sum_probs=94.7
Q ss_pred CCeeeEEEEeCCCCEEEEEc-CCeEEEEEeecccCCCcceeEEecCCCCCCCCCCc----ccc----------eeEEe-c
Q 017014 79 DGSCVAKMGFENGSTATLML-PSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAI----QGG----------LSSAF-S 142 (379)
Q Consensus 79 ~gl~~v~L~~~~gssA~I~L-~GAhVtSwkp~~w~~g~~elL~lS~~A~~dggkaI----RGG----------VPICf-P 142 (379)
.|...+.|+...|.+.+|.. .|+-|.+++-. +.++.|.|+.+.+..+.-+ |+| ++.|= .
T Consensus 46 ~G~~~l~i~ng~gl~~~VlP~rG~dI~~~~~~-----g~~l~w~s~~~~~~~P~~~~~~~~~g~~~l~~f~g~~~~cGl~ 120 (384)
T 3ty1_A 46 EGSKILTIHSKDGLTITLSPTRGMNLLRIEGF-----GSRMGWDSPVKEVVNPAFINLESRNGLGWLEGFNEMMVRCGYE 120 (384)
T ss_dssp TTCEEEEEEESSSCEEEEEGGGTTEEEEEEET-----TEEECCCCSCCSCCCGGGCCTTHHHHTGGGGTCCCSEEEEEES
T ss_pred cCeEEEEEECCCccEEEEecccCCcceeEEEC-----CEEeeecCCcccCcCccccccccCCCCchhhcCCeeEeeccCc
Confidence 45566666665567999999 89999999973 5899999994444433222 444 44442 1
Q ss_pred -CCC----C------CCCcCccCcEEeee--cCCCCccEEEEEeeCC---CCCceEEEEEEEE--eCCceEEEEEEEeCC
Q 017014 143 -CGS----D------GEVWSPCNWTLHDI--SGNPQEFIQVELISSD---TVDMVEIRCIVTL--NEASVSSELVVSNFR 204 (379)
Q Consensus 143 -fg~----~------~~FAR~~~W~l~~~--~~~~~~~v~l~L~ls~---~~~~F~L~~~VtL--~~~~L~l~L~V~Ntg 204 (379)
.|. + .+++|+..|+.... ..++...+.|+..... ..++|.|+.+|++ +++.|+++.+|+|.|
T Consensus 121 ~~G~P~~~~G~~~~LHG~~~~~pa~~~~~~~~~~~~~~i~l~g~~~~~~~~G~~~~l~~~i~~~l~~~~l~i~~~VtN~g 200 (384)
T 3ty1_A 121 WTGHPVTADGQIYTLHGKAGNTPASLVEVEVADSAPYEIRIRGLVKESTFKKADLQTLTELRYVPGSNSFSLHDVLTNHA 200 (384)
T ss_dssp CCSSCEEETTEEECTTCSGGGSCCSEEEEEEESSTTCCEEEEEEEEEEETTTEEEEEEEEEEECTTCSEEEEEEEEEECS
T ss_pred ccCCCCCcCCccccccccccCCCcceeEEEecCCCceEEEEEEEEEEeeeccCCEEEEEEEEEEeCCCEEEEEEEEEECC
Confidence 221 1 23788888554222 1123346666655543 2357788888876 678999999999999
Q ss_pred CCcchhhhhhccceecC
Q 017014 205 SSSLQLAGSIISHLTVS 221 (379)
Q Consensus 205 ~~pf~ft~ALHTYf~Vs 221 (379)
+.|+.|.-..|.||..+
T Consensus 201 ~~p~P~~~~~H~nfg~P 217 (384)
T 3ty1_A 201 DYPHDYQIIYHSNFGTP 217 (384)
T ss_dssp SSCEEEEEEEEEEECTT
T ss_pred CCCCchheecccccCCC
Confidence 99999999999999875
No 17
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12}
Probab=67.40 E-value=43 Score=31.92 Aligned_cols=121 Identities=14% Similarity=0.061 Sum_probs=64.2
Q ss_pred EEeCCC-CEEEEEcCCeEEEEEeecccC---CCcceeEEecCCCCCCCCCCcccceeEEecCCCCCCCcC-ccCcEEeee
Q 017014 86 MGFENG-STATLMLPSGLITSYKAHMWH---GGTVELLHTIVSEGKDGTPAIQGGLSSAFSCGSDGEVWS-PCNWTLHDI 160 (379)
Q Consensus 86 L~~~~g-ssA~I~L~GAhVtSwkp~~w~---~g~~elL~lS~~A~~dggkaIRGGVPICfPfg~~~~FAR-~~~W~l~~~ 160 (379)
+.+++. -.++|.+.||.|.++.=+..+ +...++.-+++... ..-...-| ++-+.+.+-+-+. ...|+....
T Consensus 37 i~V~td~l~~~is~~GG~I~~~~Lk~Y~~~~~~~~pv~Ll~~~~~--~~y~a~~g--l~~~~g~~~~~~~~~~~f~~~~~ 112 (330)
T 3blc_A 37 ISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQ--FIYQAQSG--LTGRDGPDNPANGPRPLYNVEKD 112 (330)
T ss_dssp EEEECSSCEEEEETBTCCEEEEEEEEEESSTTCSSEEEEEEECSS--CEEEEEEE--EESTTCTTSGGGCSCCBCBCSCS
T ss_pred EEEECCcEEEEEECCCCEEeEEECCCCcccccCCCCeEEecCCCC--ceeEeeee--eeccCCCCCCCCCCcceeEecCC
Confidence 344444 689999999999998653211 12235544444321 00011111 1111111100121 245876432
Q ss_pred c--C-CCCccEEEEEeeCCCCCceEEEEEEEEeCC--ceEEEEEEEeCCCCcchhh
Q 017014 161 S--G-NPQEFIQVELISSDTVDMVEIRCIVTLNEA--SVSSELVVSNFRSSSLQLA 211 (379)
Q Consensus 161 ~--~-~~~~~v~l~L~ls~~~~~F~L~~~VtL~~~--~L~l~L~V~Ntg~~pf~ft 211 (379)
. . ++++...|+|..... ..+.++.+++|.++ .+.++++|.|.++.|+++.
T Consensus 113 ~~~L~~~~~~~~v~lt~~~~-~G~~v~k~ytf~~~~Y~i~v~~~v~N~s~~~~~~~ 167 (330)
T 3blc_A 113 AYVLAEGQNELQVPMTYTDA-AGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEIS 167 (330)
T ss_dssp EEECCTTCCEEEEEEEEECT-TSCEEEEEEEEETTCCEEEEEEEEECCSSSCEEEE
T ss_pred ceeccCCCceEEEEEEEECC-CCeEEEEEEEEcCCceEEEEEEEEEcCCCCcceee
Confidence 1 1 122346777766432 36788888888644 4777788999999888654
No 18
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=62.35 E-value=4.6 Score=33.53 Aligned_cols=31 Identities=19% Similarity=0.297 Sum_probs=25.0
Q ss_pred EEEeCCceEEEEEEEeCCCCcchhhhhhccc
Q 017014 187 VTLNEASVSSELVVSNFRSSSLQLAGSIISH 217 (379)
Q Consensus 187 VtL~~~~L~l~L~V~Ntg~~pf~ft~ALHTY 217 (379)
|+|..+.=.++|+|+|+||.|+++..-+|=|
T Consensus 13 I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~ 43 (101)
T 4ep8_B 13 IALNTGRATCRVVVENHGDRPIQVGSHYHFA 43 (101)
T ss_dssp EECSTTCCEEEEEEEECSSSCEEEETTSCGG
T ss_pred EEEcCCCCEEEEEEEeCCCcceEEccccChh
Confidence 5565567789999999999999988766643
No 19
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=51.40 E-value=7.2 Score=33.55 Aligned_cols=31 Identities=19% Similarity=0.240 Sum_probs=24.9
Q ss_pred EEEeCCceEEEEEEEeCCCCcchhhhhhccc
Q 017014 187 VTLNEASVSSELVVSNFRSSSLQLAGSIISH 217 (379)
Q Consensus 187 VtL~~~~L~l~L~V~Ntg~~pf~ft~ALHTY 217 (379)
|+|-.+.=.++|+|+|+|+.|+++..-+|=|
T Consensus 19 I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~ 49 (126)
T 4ac7_B 19 IEINAGREKTTIRVSNTGDRPIQVGSHIHFV 49 (126)
T ss_dssp EETTTTSCEEEEEEEECSSSCEEEETTSCGG
T ss_pred EEeCCCCcEEEEEEEeCCCCCEEEccccchh
Confidence 5565567789999999999999988766643
No 20
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=51.40 E-value=7.2 Score=33.55 Aligned_cols=31 Identities=19% Similarity=0.240 Sum_probs=24.9
Q ss_pred EEEeCCceEEEEEEEeCCCCcchhhhhhccc
Q 017014 187 VTLNEASVSSELVVSNFRSSSLQLAGSIISH 217 (379)
Q Consensus 187 VtL~~~~L~l~L~V~Ntg~~pf~ft~ALHTY 217 (379)
|+|-.+.=.++|+|+|+|+.|+++..-+|=|
T Consensus 19 I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~ 49 (126)
T 4ubp_B 19 IEINAGREKTTIRVSNTGDRPIQVGSHIHFV 49 (126)
T ss_dssp EETTTTSCEEEEEEEECSSSCEEEETTSCGG
T ss_pred EEeCCCCcEEEEEEEeCCCCCEEEccccchh
Confidence 5565567789999999999999988766643
No 21
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=48.49 E-value=26 Score=37.44 Aligned_cols=56 Identities=13% Similarity=0.212 Sum_probs=43.3
Q ss_pred cEEEEEeeCCCCCceEEEEEEEEeC--CceEEEEEEEeCCCCcchhhhhhccceecCC
Q 017014 167 FIQVELISSDTVDMVEIRCIVTLNE--ASVSSELVVSNFRSSSLQLAGSIISHLTVST 222 (379)
Q Consensus 167 ~v~l~L~ls~~~~~F~L~~~VtL~~--~~L~l~L~V~Ntg~~pf~ft~ALHTYf~VsD 222 (379)
..+|++.+.+....+++++..++.+ +.++...+++|+|++++.++.+.-.-+.+.+
T Consensus 130 ~~~l~i~l~D~~~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~~~l~~~~s~~l~~~~ 187 (720)
T 2yfo_A 130 AQTLEIVLADENAQVEVHLLYGVLEENDVITRSVRIKNTGTGQITIEKAAAACLDFVQ 187 (720)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEEETTTTEEEEEEEEEECSSSCEEEEEEEEEEEEESS
T ss_pred CcEEEEEEEECCCCEEEEEEEEEECCCCEEEEEEEEEECCCCCEEEeeeecccccCCC
Confidence 4456666666667889998888864 5799999999999999998887655555544
No 22
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=48.25 E-value=23 Score=37.88 Aligned_cols=58 Identities=17% Similarity=0.165 Sum_probs=45.3
Q ss_pred ccEEEEEeeCCCCCceEEEEEEEEeC--CceEEEEEEEeCCCCcchhhhhhccceecCCC
Q 017014 166 EFIQVELISSDTVDMVEIRCIVTLNE--ASVSSELVVSNFRSSSLQLAGSIISHLTVSTP 223 (379)
Q Consensus 166 ~~v~l~L~ls~~~~~F~L~~~VtL~~--~~L~l~L~V~Ntg~~pf~ft~ALHTYf~VsDi 223 (379)
+.-+|++.|.|....+++++..++.+ +.++...+++|+|++++.++.+.-.-|.+.+-
T Consensus 129 ~~~~l~i~l~D~~~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~v~l~~~~s~~l~~~~~ 188 (729)
T 4fnq_A 129 EAETLEIVLGDALIGLEVTLQYTAYEKWNVITRAARFENKGGERLKLLRALSMSVDFPTA 188 (729)
T ss_dssp GEEEEEEEEEETTTTEEEEEEEEEESSSSEEEEEEEEEECSSSCEEEEEEEEEEEEESCC
T ss_pred CceEEEEEEEeCCCCeEEEEEEEEECCCCEEEEEEEEEECCCCCEEEeEeeeecCcCCCC
Confidence 45566666666667888888888853 57899999999999999998877777776653
No 23
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=45.90 E-value=33 Score=36.69 Aligned_cols=56 Identities=13% Similarity=0.118 Sum_probs=43.2
Q ss_pred cEEEEEeeCCCCCceEEEEEEEEeC--CceEEEEEEEeCCCCcchhhhhhccceecCC
Q 017014 167 FIQVELISSDTVDMVEIRCIVTLNE--ASVSSELVVSNFRSSSLQLAGSIISHLTVST 222 (379)
Q Consensus 167 ~v~l~L~ls~~~~~F~L~~~VtL~~--~~L~l~L~V~Ntg~~pf~ft~ALHTYf~VsD 222 (379)
..++++.+.+....+++++..++.+ +.++...+++|+|++++.++.+.-.-+.+.+
T Consensus 134 ~~~l~i~l~D~~~~l~v~l~y~~~~~~~~i~~~~~i~N~g~~~~~l~~~~s~~l~~p~ 191 (732)
T 2xn2_A 134 AQTLIVTLEDKVSKLEYDLLYTIYRDRPVIVRSVQVHNHGEEAVYLEKVASMQMDYVD 191 (732)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEEETTSSEEEEEEEEEECSSSCEEEEEEEEEEEEESS
T ss_pred CcEEEEEEEeCCCCEEEEEEEEEECCCCEEEEEEEEEECcCCcEEEeEEeeccccCCC
Confidence 4456666666667888888888864 5788899999999999998887765566554
No 24
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=45.36 E-value=24 Score=29.79 Aligned_cols=22 Identities=5% Similarity=0.214 Sum_probs=19.4
Q ss_pred eCCceEEEEEEEeCCCCcchhh
Q 017014 190 NEASVSSELVVSNFRSSSLQLA 211 (379)
Q Consensus 190 ~~~~L~l~L~V~Ntg~~pf~ft 211 (379)
.++.+.+.|+|+|.++++++++
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~ 37 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQ 37 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEE
T ss_pred CCCeEEEEEEEEcCCCCcEEEE
Confidence 4689999999999999988766
No 25
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=45.14 E-value=1.9e+02 Score=26.67 Aligned_cols=118 Identities=14% Similarity=0.064 Sum_probs=64.9
Q ss_pred EEeCCC-CEEEEEcCCeEEEEEeecccCC---CcceeEEecCCCCCCCCCCcccceeEEe-cCCCCC-CC-cC--ccCcE
Q 017014 86 MGFENG-STATLMLPSGLITSYKAHMWHG---GTVELLHTIVSEGKDGTPAIQGGLSSAF-SCGSDG-EV-WS--PCNWT 156 (379)
Q Consensus 86 L~~~~g-ssA~I~L~GAhVtSwkp~~w~~---g~~elL~lS~~A~~dggkaIRGGVPICf-Pfg~~~-~F-AR--~~~W~ 156 (379)
+.+++. -.++|.+.||.|.++.=+..+. ...++.-+++... ..-|+-+ +.+.++ .+ .. ...|+
T Consensus 6 i~v~td~l~~~is~~GG~I~~~~Lk~Y~~~~~~~~pv~Ll~~~~~--------~~y~a~~gl~~~~g~~~~~~~~~~~f~ 77 (280)
T 3bs6_A 6 ISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQ--------FIYQAQSGLTGRDGPDNPANGPRPLYN 77 (280)
T ss_dssp EEEECSSCEEEEETBTTEEEEEEEEEEESSTTCCSEEEEEEEETT--------EEEEEEEEEESTTCTTSGGGSSCCBCB
T ss_pred EEEECCcEEEEEECCCCeEeeeEcCCCcchhcCCCCEEEccCCCC--------CeeEEEEeeeccCCCCCCCCCCceeEE
Confidence 445555 6999999999999986532211 2235544444220 0112211 111111 12 22 25687
Q ss_pred Eeeec--CC-CCccEEEEEeeCCCCCceEEEEEEEEeCC--ceEEEEEEEeCCCCcchhhh
Q 017014 157 LHDIS--GN-PQEFIQVELISSDTVDMVEIRCIVTLNEA--SVSSELVVSNFRSSSLQLAG 212 (379)
Q Consensus 157 l~~~~--~~-~~~~v~l~L~ls~~~~~F~L~~~VtL~~~--~L~l~L~V~Ntg~~pf~ft~ 212 (379)
..... .. +.+...|+|+... ...+.++.+++|.++ .+.+++.|.|.+++|+++..
T Consensus 78 ~~~~~~~l~~~~~~~~Vtlt~~~-~~G~~~~ktytf~~~~Y~i~v~~~v~N~s~~~~~~~~ 137 (280)
T 3bs6_A 78 VEKDAYVLAEGQNELQVPMTYTD-AAGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISS 137 (280)
T ss_dssp CSCSEEECCTTCSEEEEEEEEEC-TTCCEEEEEEEEETTCCEEEEEEEEECCSSSCEEEEE
T ss_pred ecCCceeccCCCceeEEEEEEEC-CCCeEEEEEEEEcCCceEEEEEEEEEcCCCCceeEee
Confidence 65211 11 2234666666543 246888888888643 46777788899999887653
No 26
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=32.77 E-value=52 Score=35.60 Aligned_cols=55 Identities=13% Similarity=0.115 Sum_probs=39.8
Q ss_pred cEEEEEeeCCCCCceEEEEEEEEe--CCceEEEEEEEeCCCCcchhhhhhccceecC
Q 017014 167 FIQVELISSDTVDMVEIRCIVTLN--EASVSSELVVSNFRSSSLQLAGSIISHLTVS 221 (379)
Q Consensus 167 ~v~l~L~ls~~~~~F~L~~~VtL~--~~~L~l~L~V~Ntg~~pf~ft~ALHTYf~Vs 221 (379)
..+|++.+.|....+++++..++. .+.++...+++|.|++++.++.+.-.-+.+.
T Consensus 131 ~~~l~i~l~D~~~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~v~l~~~~S~~l~~p 187 (745)
T 3mi6_A 131 AQTLVVSFNDRITGLALDLNYSIFPHQDVIVKSAKFTNPSSEKLVLNRALSSQLDLP 187 (745)
T ss_dssp CEEEEEEEEETTTCCEEEEEEEEEGGGTEEEEEEEEECCSSSCEEEEEEEEEEEEES
T ss_pred CCEEEEEEEeCCCCeEEEEEEEEECCCCEEEEEEEEEECCCCCEEeeeecccccCCC
Confidence 455666666666678888777774 3678888999999999999987654444443
No 27
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.60 E-value=24 Score=28.63 Aligned_cols=31 Identities=13% Similarity=0.125 Sum_probs=25.1
Q ss_pred CCceEEEEEEEeCCCCcchhhhhhccceecC
Q 017014 191 EASVSSELVVSNFRSSSLQLAGSIISHLTVS 221 (379)
Q Consensus 191 ~~~L~l~L~V~Ntg~~pf~ft~ALHTYf~Vs 221 (379)
+++-+..+.++|+|+.|..|+.-...+|.|.
T Consensus 40 ~~~~~~~~~l~N~g~~~~~f~~~~~~~F~i~ 70 (122)
T 2ys4_A 40 KYSTQKILLVRNIGNKNAVFHIKTCRPFSIE 70 (122)
T ss_dssp SSCEEEEEEEECCSSSCEEEEEECCTTEEEE
T ss_pred CCeEEEEEEEEECCCCCEEEEEecCCCeEEE
Confidence 5889999999999999998876665566654
No 28
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=27.33 E-value=21 Score=33.35 Aligned_cols=30 Identities=27% Similarity=0.289 Sum_probs=24.2
Q ss_pred EEEeCCceEEEEEEEeCCCCcchhhhhhcc
Q 017014 187 VTLNEASVSSELVVSNFRSSSLQLAGSIIS 216 (379)
Q Consensus 187 VtL~~~~L~l~L~V~Ntg~~pf~ft~ALHT 216 (379)
|+|..+.=.++|+|+|+|+.|+++..-+|=
T Consensus 118 I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF 147 (225)
T 3qga_A 118 IELNAGKEITELKVTNKGPKSLHVGSHFHF 147 (225)
T ss_dssp EETTTTCCCEEEEEEECSSSCEEEETTSCG
T ss_pred eecCCCCceEEEEEEECCCCceeeccccch
Confidence 556555678899999999999998876664
No 29
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=26.80 E-value=21 Score=33.70 Aligned_cols=31 Identities=19% Similarity=0.282 Sum_probs=24.4
Q ss_pred EEEeCCceEEEEEEEeCCCCcchhhhhhccc
Q 017014 187 VTLNEASVSSELVVSNFRSSSLQLAGSIISH 217 (379)
Q Consensus 187 VtL~~~~L~l~L~V~Ntg~~pf~ft~ALHTY 217 (379)
|+|..+.=.++|.|+|+|+.|+++..-+|=|
T Consensus 118 I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~ 148 (238)
T 1e9y_A 118 ITINEGKKAVSVKVKNVGDRPVQIGSHFHFF 148 (238)
T ss_dssp EETTTTCCCCEEEEEECSSSCEEEETTSCGG
T ss_pred eeeCCCCCeEEEEEEeCCCCceEeccccchH
Confidence 5554555689999999999999998776643
No 30
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=25.28 E-value=34 Score=34.33 Aligned_cols=29 Identities=17% Similarity=0.289 Sum_probs=22.5
Q ss_pred EEEEEEEEeCCceEEEEEEEeCCCCcchhhh
Q 017014 182 EIRCIVTLNEASVSSELVVSNFRSSSLQLAG 212 (379)
Q Consensus 182 ~L~~~VtL~~~~L~l~L~V~Ntg~~pf~ft~ 212 (379)
.+.|.| -+.+|+++|+|+|.|++|+.+..
T Consensus 256 ~A~Y~v--pgR~l~~~~~VtN~g~~pvrlge 284 (382)
T 1yew_A 256 DATYRV--PGRAMRMKLTITNHGNSPIRLGE 284 (382)
T ss_dssp EEEEES--SCSEEEEEEEEEECSSSCEEEEE
T ss_pred ccEEec--CCcEEEEEEEEEcCCCCceEeee
Confidence 344444 47899999999999999996543
No 31
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=23.39 E-value=40 Score=30.19 Aligned_cols=43 Identities=23% Similarity=0.162 Sum_probs=30.0
Q ss_pred CCceEEEEEEEeCCCCcchhhhh-hccceecCCCCceEEecCCC
Q 017014 191 EASVSSELVVSNFRSSSLQLAGS-IISHLTVSTPEANYAVGLEG 233 (379)
Q Consensus 191 ~~~L~l~L~V~Ntg~~pf~ft~A-LHTYf~VsDi~~v~V~GLeG 233 (379)
++.-..++.++|+|+.|+.++.. +-.|+.+..-..+-.-|..|
T Consensus 18 g~~~~~~~~i~N~g~~pl~i~~~~~p~~~~~~~~~~~I~PG~~g 61 (220)
T 2qsv_A 18 EDEGVVRLVVNNTDESDLQVAVVSLPSFVSLDDRAFRLQAREPR 61 (220)
T ss_dssp TCCCEEEEEEEECSSSCEEEEEEECCTTEECSCCEEEECSSSCE
T ss_pred CCcceEEEEEEeCCCCceEEEeccCCCceEeeeCcceeCCCCce
Confidence 46778899999999999999875 56787764332333344443
No 32
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=22.41 E-value=55 Score=31.96 Aligned_cols=19 Identities=21% Similarity=0.361 Sum_probs=16.9
Q ss_pred CceEEEEEEEeCCCCcchh
Q 017014 192 ASVSSELVVSNFRSSSLQL 210 (379)
Q Consensus 192 ~~L~l~L~V~Ntg~~pf~f 210 (379)
+.+.+..+|+|+|++|+.|
T Consensus 36 ~~~~vk~tvtN~g~~~~~l 54 (343)
T 2x3c_A 36 DDVRVNLTLTNTGDKPIRL 54 (343)
T ss_dssp SCCEEEEEEEECSSSCEEE
T ss_pred CCeEEEEEEEeCCCCceEe
Confidence 5699999999999999865
No 33
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=21.58 E-value=53 Score=33.29 Aligned_cols=23 Identities=17% Similarity=0.177 Sum_probs=19.9
Q ss_pred eCCceEEEEEEEeCCCCcchhhh
Q 017014 190 NEASVSSELVVSNFRSSSLQLAG 212 (379)
Q Consensus 190 ~~~~L~l~L~V~Ntg~~pf~ft~ 212 (379)
.+.+|+++|+|+|.|++|+.+..
T Consensus 296 pgR~l~~~~~VtN~g~~pvrlge 318 (419)
T 3rfr_A 296 PGRELTINVKVKNGTSQPVRLGE 318 (419)
T ss_dssp SSSEEEEEEEEECCSSSCBEEEE
T ss_pred CCcEEEEEEEEecCCCCceEEee
Confidence 47899999999999999996543
Done!