Query 017018
Match_columns 379
No_of_seqs 147 out of 174
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 07:35:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017018.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017018hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qg8_A Protein (spore coat pol 94.1 0.15 5.2E-06 44.2 7.8 125 194-331 87-216 (255)
2 3f1y_A Mannosyl-3-phosphoglyce 90.9 1.1 3.8E-05 43.8 10.0 193 119-330 93-310 (387)
3 2ffu_A Ppgalnact-2, polypeptid 89.4 1.6 5.3E-05 43.0 9.7 207 119-332 65-293 (501)
4 2d7i_A Polypeptide N-acetylgal 89.4 1.9 6.6E-05 43.6 10.6 211 119-333 111-342 (570)
5 1xhb_A Polypeptide N-acetylgal 89.3 0.75 2.6E-05 44.6 7.2 138 194-333 113-262 (472)
6 2z86_A Chondroitin synthase; G 86.1 1.2 4.2E-05 44.6 6.8 210 119-333 92-334 (625)
7 2z86_A Chondroitin synthase; G 84.2 11 0.00038 37.7 12.7 189 119-329 374-572 (625)
8 4fix_A UDP-galactofuranosyl tr 70.5 4 0.00014 42.7 4.9 132 195-329 268-417 (657)
9 3bcv_A Putative glycosyltransf 66.7 4 0.00014 34.7 3.3 108 119-231 4-120 (240)
10 1omz_A Alpha-1,4-N-acetylhexos 58.4 16 0.00055 35.2 6.2 103 119-223 27-134 (293)
11 2bo4_A Mannosylglycerate synth 47.6 15 0.00052 36.2 4.2 183 122-322 2-210 (397)
12 4hg6_A Cellulose synthase subu 35.8 33 0.0011 36.4 4.8 124 194-329 237-368 (802)
13 3l7i_A Teichoic acid biosynthe 31.0 10 0.00035 39.2 0.0 34 194-227 82-115 (729)
14 2nxv_A ATP synthase subunits r 30.1 41 0.0014 29.7 3.8 29 194-222 73-101 (249)
15 2ls4_A High affinity copper up 35.7 11 0.00039 24.4 0.0 15 19-33 5-19 (26)
16 2c0n_A A197; thermophil protei 28.4 20 0.00068 33.2 1.4 38 183-227 44-84 (203)
17 3sd4_A PHD finger protein 20; 25.4 41 0.0014 25.3 2.5 14 149-162 42-55 (69)
18 2eqm_A PHD finger protein 20-l 20.3 54 0.0018 26.1 2.4 15 149-163 49-63 (88)
No 1
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=94.09 E-value=0.15 Score=44.24 Aligned_cols=125 Identities=10% Similarity=-0.074 Sum_probs=67.4
Q ss_pred cCccEEEEecccccCCCCChHHHHHHHHHh-CCcccCCCccCCCCcceeeeeecCCcceeeeeccCCCCCCCCCCCCccc
Q 017018 194 AAYEYIFIWDEDLGVEHFNGDKYMELVKKH-GLDISQPGLEPNNGLTWQMTKRRGDQEVHKVTEEKPGWCSDPHLPPCAA 272 (379)
Q Consensus 194 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~-gLeISQPALd~~S~ish~iT~R~~~~~vHr~~~~~~g~C~~~~~ppcT~ 272 (379)
+..|||++.|+|..++...++++++.++++ +..+..+....- .....+..+..........-. ....
T Consensus 87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-----~~~~ 154 (255)
T 1qg8_A 87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTY-------HLNENRDIVKETVRPAAQVTW-----NAPC 154 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEE-------EEC---CEEEEEEECCCSCBS-----CCTT
T ss_pred cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEE-------EeCCCCcchhhccCchHHHHH-----hhcC
Confidence 578999999999999988899999999876 666655543210 000001111110000000000 0011
Q ss_pred eEEEecccccHHHHHHhh-hh---hcCCCcccchhhHhhhHhhcCCCCeEEEEeeeeEEeecc
Q 017018 273 FVEIMAPVFSREAWRCVW-HM---IQNDLVHGWGLDFALRRCVEPAHEKIGVVDSQWIIHQVI 331 (379)
Q Consensus 273 FVEiMAPVFSR~Awrcvw-~m---iqnDLvhGWGLDf~~~~c~~~~~~kiGVVDa~~VvH~g~ 331 (379)
++-..+-+|+|++++.+- .+ +..+.....+-|+.+...+... .++..++...+.|+..
T Consensus 155 ~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~-g~~~~~~~~~~~~r~~ 216 (255)
T 1qg8_A 155 AIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHF-YPFYPLDEELDLNYIT 216 (255)
T ss_dssp TSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTT-CCBEEEEEEEEEEEEC
T ss_pred CCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHh-CCEEEecCcEEEEEEc
Confidence 222234479999998774 33 1112222345576554444323 3699999998888743
No 2
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=90.92 E-value=1.1 Score=43.81 Aligned_cols=193 Identities=13% Similarity=0.053 Sum_probs=100.0
Q ss_pred CCceEEEEEeccccccchhHHhhcc-------ccCcEEEEEEeCCCCCccccccccCccEEEEE--------eccccccc
Q 017018 119 KPKYLLTITVGLNQKKNIDRMVKKF-------SEDFQIMLFHYDGQTSQWDEFEWSKSAIHVSI--------RRQTKWWY 183 (379)
Q Consensus 119 ~~kyLv~~~VG~~qk~~Vd~~v~kf-------~~~F~v~LfhYDG~~~~w~d~~Ws~~aihv~~--------~kqtKWw~ 183 (379)
.++..|.+++ ++...++..+++.. +.+|.|++ .=||++|+=.++-=.-.+..+.. .+++|-.-
T Consensus 93 ~p~vSVVIP~-yNe~~~l~~~l~sl~~~l~~~~~~~EIIV-VDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A 170 (387)
T 3f1y_A 93 GLTVSAVLPS-RNVADTVGGIIDEIHALNERAPLIDQILV-VDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDA 170 (387)
T ss_dssp TCCEEEEEEE-SSCTTTHHHHHHHHHHHHHHSCCCSEEEE-EECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHH
T ss_pred CCeEEEEEEc-CCCHHHHHHHHHHHHHHHhcCCCCeEEEE-EcCcCCccHHHHHHHhCchhcccceeEecCCccCCHHHH
Confidence 4678888888 45556666665544 35788775 56888876433211111111111 13333222
Q ss_pred cccccCcccccCccEEEEeccccc-CCCCChHHHHHHHHHh-CCcccCCCccCCCCcceeeeeecCCcceeee----ecc
Q 017018 184 AKRFLHPDVVAAYEYIFIWDEDLG-VEHFNGDKYMELVKKH-GLDISQPGLEPNNGLTWQMTKRRGDQEVHKV----TEE 257 (379)
Q Consensus 184 akRfLHPdiva~YDYIflwDDDL~-vd~f~i~ry~~Ivr~~-gLeISQPALd~~S~ish~iT~R~~~~~vHr~----~~~ 257 (379)
.+.=+ -.+.+|||++.|.|.. ++...+.++++.+.+. +..+................ +.....+.+. ...
T Consensus 171 ~n~G~---~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~-~~~~g~v~~~~~~~l~~ 246 (387)
T 3f1y_A 171 MWRAL---SVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIE-EDGGGRVTELTAKPLFN 246 (387)
T ss_dssp HHHHT---TTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------C-CBCCSHHHHHTHHHHHH
T ss_pred HHHHH---HhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccc-cccCCchhhhhHHHHHH
Confidence 22211 1257999999999999 8999999999988765 56655543321100000000 0001100000 000
Q ss_pred --CCCCCCCCCCCCccceEEEecccccHHHHHHhhhhhcCCCcccchhhHhhh-HhhcC-CCCeEEEEeeeeEEeec
Q 017018 258 --KPGWCSDPHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALR-RCVEP-AHEKIGVVDSQWIIHQV 330 (379)
Q Consensus 258 --~~g~C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqnDLvhGWGLDf~~~-~c~~~-~~~kiGVVDa~~VvH~g 330 (379)
.+..+ .. .-|.++|. +|+|++++.+ .+ ..|||.|..+. +++.. .-++|.=|+-.+..|..
T Consensus 247 ~~~~~l~-~~-~d~~sG~~-----a~rR~~l~~i-~f-----~~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h~~ 310 (387)
T 3f1y_A 247 LFYPELA-GF-VQPLAGEF-----VADRELFCSI-PF-----LTGYAVETGIMIDVLKKVGLGAMAQVDLGERQNRH 310 (387)
T ss_dssp HHCGGGT-TC-SCTTCSCE-----EEEHHHHTTS-CE-----ECSTTHHHHHHHHHHHHHCGGGEEEEEEEECCCCC
T ss_pred HHhHhhc-cc-cccccccE-----EEEHHHHHhC-CC-----CCCcchHHHHHHHHHHhcCCCeEEEEecceeecCC
Confidence 00000 00 11223332 6999999876 33 25899986553 33322 22358888888888863
No 3
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=89.44 E-value=1.6 Score=42.97 Aligned_cols=207 Identities=12% Similarity=0.065 Sum_probs=100.8
Q ss_pred CCceEEEEEeccccccc----hhHHhhccccC--cEEEEEEeCCCCCcc-c-cccccCccEEEEEe--cccccccccccc
Q 017018 119 KPKYLLTITVGLNQKKN----IDRMVKKFSED--FQIMLFHYDGQTSQW-D-EFEWSKSAIHVSIR--RQTKWWYAKRFL 188 (379)
Q Consensus 119 ~~kyLv~~~VG~~qk~~----Vd~~v~kf~~~--F~v~LfhYDG~~~~w-~-d~~Ws~~aihv~~~--kqtKWw~akRfL 188 (379)
.|+.-|.+++=-..... ++.+++.-..+ +.|++ .=||+.|+= . .++-..+ ++|... +.++ +....
T Consensus 65 ~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIv-VDDgS~D~t~~~~~~~~~~-v~vi~~~~n~G~---~~A~N 139 (501)
T 2ffu_A 65 LPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIIL-VDDYSNDPEDGALLGKIEK-VRVLRNDRREGL---MRSRV 139 (501)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEE-EECSCSCTHHHHGGGGBTT-EEEEECSSCCHH---HHHHH
T ss_pred CCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEE-EECCCCchHHHHHHhcCCC-EEEEECCCCcCH---HHHHH
Confidence 45666777763322213 34444332334 47765 557877642 1 1111122 333321 1221 11111
Q ss_pred CcccccCccEEEEecccccCCCCChHHHHHHHHHhCCcccCCCccCCC--Ccceeee----eecCCcceeeeeccCC---
Q 017018 189 HPDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNN--GLTWQMT----KRRGDQEVHKVTEEKP--- 259 (379)
Q Consensus 189 HPdiva~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~S--~ish~iT----~R~~~~~vHr~~~~~~--- 259 (379)
.---.+..|||++.|+|..++.-.++++++.+++..-.+..|.++.-. .+.+.-. ...-...++......+
T Consensus 140 ~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (501)
T 2ffu_A 140 RGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQ 219 (501)
T ss_dssp HHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHH
T ss_pred HHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHH
Confidence 111235789999999999999999999999999887777777653211 1111000 0000000000000000
Q ss_pred --CCCCCCCCCCccceEEEecccccHHHHHHhhhhhcCCCcccc-hhhHhhhHhhcCCCCeEEEEeeeeEEeeccC
Q 017018 260 --GWCSDPHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGW-GLDFALRRCVEPAHEKIGVVDSQWIIHQVIP 332 (379)
Q Consensus 260 --g~C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqnDLvhGW-GLDf~~~~c~~~~~~kiGVVDa~~VvH~g~P 332 (379)
.+-.++..+-.+.++-..+=+|+|+++..+=.+ ...+ ..| |=|+-+..-+.....++.++....|.|..+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgf-de~~-~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~ 293 (501)
T 2ffu_A 220 RRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKY-DMMM-DVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRK 293 (501)
T ss_dssp HHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCC-CTTC-CSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCS
T ss_pred HhhccCCCCCcccCccccceEEEEEHHHHHHhCCC-Cccc-cccCcchHHHHHHHHhcCCeEEEccCcEEEEEccC
Confidence 000011111011111122338999999887543 2333 466 4454443222224579999999999997444
No 4
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=89.36 E-value=1.9 Score=43.60 Aligned_cols=211 Identities=12% Similarity=0.088 Sum_probs=100.8
Q ss_pred CCceEEEEEeccccccc----hhHHhhccccC--cEEEEEEeCCCCCcc-cc-c-ccc--CccEEEEEeccccccccccc
Q 017018 119 KPKYLLTITVGLNQKKN----IDRMVKKFSED--FQIMLFHYDGQTSQW-DE-F-EWS--KSAIHVSIRRQTKWWYAKRF 187 (379)
Q Consensus 119 ~~kyLv~~~VG~~qk~~----Vd~~v~kf~~~--F~v~LfhYDG~~~~w-~d-~-~Ws--~~aihv~~~kqtKWw~akRf 187 (379)
.|+.-|++++=-..... |+.+++.-..+ |.|+| .=||+.|+- .+ + ++. ..-|+|...... .=++...
T Consensus 111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIV-VDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n-~G~~~A~ 188 (570)
T 2d7i_A 111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVL-VDDFSDREHLKKPLEDYMALFPSVRILRTKKR-EGLIRTR 188 (570)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEE-EECSCCCGGGTHHHHHHHTTSTTEEEEECSSC-CCHHHHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEE-EECCCCcHHHHHHHHHHHHhCCeEEEEECCCC-CCHHHHH
Confidence 45677777774332133 33333332334 46665 567877654 21 1 110 112444332211 1111111
Q ss_pred cCcccccCccEEEEecccccCCCCChHHHHHHHHHhCCcccCCCccCCC--Ccceeee----eecC-Cccee-eeeccCC
Q 017018 188 LHPDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNN--GLTWQMT----KRRG-DQEVH-KVTEEKP 259 (379)
Q Consensus 188 LHPdiva~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~S--~ish~iT----~R~~-~~~vH-r~~~~~~ 259 (379)
..---.+..|||++.|+|..++.-.++++++.+++..-.+..|.++.-. .+.+... .+.. ...+. ++.....
T Consensus 189 N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (570)
T 2d7i_A 189 MLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPP 268 (570)
T ss_dssp HHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCT
T ss_pred HHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccch
Confidence 1111135789999999999999999999999998765445545432111 1111110 0000 00000 0000000
Q ss_pred C-CCCCCCCCCccceEEEecccccHHHHHHhhhhhcCCCcccc-hhhHhhhHhhcCCCCeEEEEeeeeEEeeccCC
Q 017018 260 G-WCSDPHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGW-GLDFALRRCVEPAHEKIGVVDSQWIIHQVIPS 333 (379)
Q Consensus 260 g-~C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqnDLvhGW-GLDf~~~~c~~~~~~kiGVVDa~~VvH~g~Pt 333 (379)
. .-.++..+--+.++-..+-+|+|++|+.+=.+ ..++ ..| |=|+-+..-+.....+|.++....|.|..+..
T Consensus 269 ~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgf-De~~-~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~ 342 (570)
T 2d7i_A 269 ELQKADPSDPFESPVMAGGLFAVDRKWFWELGGY-DPGL-EIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKY 342 (570)
T ss_dssp TTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSS-CTTC-CSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCSS
T ss_pred hhhccCCCcceecccccceEEEEEHHHHHhcCCC-CCcc-cccCcchHHHHHHHHhCCCeEEEccCeEEEEEcccc
Confidence 0 00000111111122222347999999888443 3333 466 44554433333346799999999999975544
No 5
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=89.26 E-value=0.75 Score=44.57 Aligned_cols=138 Identities=11% Similarity=0.062 Sum_probs=70.7
Q ss_pred cCccEEEEecccccCCCCChHHHHHHHHHhCCcccCCCccCC--CCccee----eeeecCCcceeeeeccCCC-----CC
Q 017018 194 AAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPN--NGLTWQ----MTKRRGDQEVHKVTEEKPG-----WC 262 (379)
Q Consensus 194 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~--S~ish~----iT~R~~~~~vHr~~~~~~g-----~C 262 (379)
+..|||++.|+|..++.-.++++++.+++..-.+..|.++.- ..+.+. .+...-...++.....-+. +-
T Consensus 113 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (472)
T 1xhb_A 113 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRK 192 (472)
T ss_dssp CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTT
T ss_pred ccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhccc
Confidence 679999999999999999999999999887665555654211 111110 0000000000000000000 00
Q ss_pred CCCCCCCccceEEEecccccHHHHHHhhhhhcCCCcccch-hhHhhhHhhcCCCCeEEEEeeeeEEeeccCC
Q 017018 263 SDPHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWG-LDFALRRCVEPAHEKIGVVDSQWIIHQVIPS 333 (379)
Q Consensus 263 ~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqnDLvhGWG-LDf~~~~c~~~~~~kiGVVDa~~VvH~g~Pt 333 (379)
.+...+-.+.++-..+=+|+|++|+.+=.+ ..++ ..|| =|+-+..-+.....++.++....|.|....+
T Consensus 193 ~~~~~~~~~~~~~g~~~~irr~~~~~iGgf-de~~-~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~~~~ 262 (472)
T 1xhb_A 193 GDRTLPVRTPTMAGGLFSIDRDYFQEIGTY-DAGM-DIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKA 262 (472)
T ss_dssp TCTTSCEECSBCCSSSEEEEHHHHHHTTSC-CTTS-CTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC---
T ss_pred CCCCCcccCccccceeEEEEHHHHHHcCCC-CCcc-cccCchhHHHHHHHHhcCCeEEEccCcEEEEEccCc
Confidence 000001111111122336899999887543 2333 3664 2433322222245799999999999986544
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=86.15 E-value=1.2 Score=44.62 Aligned_cols=210 Identities=17% Similarity=0.201 Sum_probs=100.7
Q ss_pred CCceEEEEEeccccccchhHHhhcc-----ccCcEEEEEEeCCCCCccccc--cccC-ccEEEEEeccccccccccccCc
Q 017018 119 KPKYLLTITVGLNQKKNIDRMVKKF-----SEDFQIMLFHYDGQTSQWDEF--EWSK-SAIHVSIRRQTKWWYAKRFLHP 190 (379)
Q Consensus 119 ~~kyLv~~~VG~~qk~~Vd~~v~kf-----~~~F~v~LfhYDG~~~~w~d~--~Ws~-~aihv~~~kqtKWw~akRfLHP 190 (379)
.++.-|.+++ ++....+...++.. +.++.|+++. ||+.++-.++ ++.+ .-+++....+...-.+....+-
T Consensus 92 ~p~vsviIp~-~n~~~~l~~~l~sl~~q~~~~~~eiivvD-d~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~N~g 169 (625)
T 2z86_A 92 IDGLSIVIPT-YNRAKILAITLACLCNQKTIYDYEVIVAD-DGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLG 169 (625)
T ss_dssp CCCEEEEEEE-SSCHHHHHHHHHHHHTCCCSSCEEEEEEE-ESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHHHHH
T ss_pred CCcEEEEEec-CCcHHHHHHHHHHHHhhccCCCeEEEEEe-CCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHHHHH
Confidence 4566677766 33344555555543 2378887654 7777653221 1111 1233333332221111111011
Q ss_pred ccccCccEEEEecccccCCCCChHHHHHHHHHhC-CcccCCCccCCC-Cccee------eeeec-CC----cceeeeecc
Q 017018 191 DVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHG-LDISQPGLEPNN-GLTWQ------MTKRR-GD----QEVHKVTEE 257 (379)
Q Consensus 191 diva~YDYIflwDDDL~vd~f~i~ry~~Ivr~~g-LeISQPALd~~S-~ish~------iT~R~-~~----~~vHr~~~~ 257 (379)
=-.+.+|||++.|+|..++.-.+.++++.+++.. .-+.+|...... ...+. -..+. +. ..+......
T Consensus 170 ~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (625)
T 2z86_A 170 LRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQ 249 (625)
T ss_dssp HHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC-------------
T ss_pred HHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhcc
Confidence 1125799999999999999999999999988743 334444321111 00000 00000 00 000000000
Q ss_pred --CCCC------CCC---CCCCCccceEEEecccccHHHHHHhhhhhcCCCcccch-hhHhhhHhhcCCCCeEEEEeeee
Q 017018 258 --KPGW------CSD---PHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWG-LDFALRRCVEPAHEKIGVVDSQW 325 (379)
Q Consensus 258 --~~g~------C~~---~~~ppcT~FVEiMAPVFSR~Awrcvw~miqnDLvhGWG-LDf~~~~c~~~~~~kiGVVDa~~ 325 (379)
...| +.+ ....++ .++=..+-+|+|++|+.+=.+ ..++ ..|| =|+-+..-+.....++..++...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~rr~~l~~iGgf-de~~-~~~g~ED~dl~~Rl~~~G~~i~~~p~~~ 326 (625)
T 2z86_A 250 NKSVDWRIEHFKNTDNLRLCNTPF-RFFSGGNVAFAKKWLFRAGWF-DEEF-THWGGEDNEFGYRLYREGCYFRSVEGAM 326 (625)
T ss_dssp --CCCTHHHHHHHTTTTTTCSCGG-GGCCTTEEEEETHHHHHHCCC-CTTC-SSCCCHHHHHHHHHHHTTCEEEECGGGC
T ss_pred CCccccchhhhcccccccccCCce-eEEeeceeeeEHHHHHHhCCC-cccc-ccCCcchhhhhhhHHhCCceEEEcccch
Confidence 0000 000 001111 223333458999999887433 3344 3664 55554433333457999999999
Q ss_pred EEeeccCC
Q 017018 326 IIHQVIPS 333 (379)
Q Consensus 326 VvH~g~Pt 333 (379)
+.|...+.
T Consensus 327 v~H~~~~~ 334 (625)
T 2z86_A 327 AYHQEPPG 334 (625)
T ss_dssp EEEECCC-
T ss_pred hhccCCcc
Confidence 99985443
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=84.16 E-value=11 Score=37.66 Aligned_cols=189 Identities=15% Similarity=0.112 Sum_probs=89.9
Q ss_pred CCceEEEEEeccccccchhHHhhcc----ccCcEEEEEEeCCCCCcccc-c-cc---cCccEEEEEeccccccccccccC
Q 017018 119 KPKYLLTITVGLNQKKNIDRMVKKF----SEDFQIMLFHYDGQTSQWDE-F-EW---SKSAIHVSIRRQTKWWYAKRFLH 189 (379)
Q Consensus 119 ~~kyLv~~~VG~~qk~~Vd~~v~kf----~~~F~v~LfhYDG~~~~w~d-~-~W---s~~aihv~~~kqtKWw~akRfLH 189 (379)
.++.-|.+++ ++....+.+.++-. -.+|.|+++ =||++|+=.+ + ++ ..+...+...++++-.-.+.-+
T Consensus 374 ~~~vsiii~~-yn~~~~l~~~l~s~~~q~~~~~eiivv-dd~S~d~t~~~~~~~~~~~~~i~~~~~~n~G~~~a~n~g~- 450 (625)
T 2z86_A 374 VPLVSIYIPA-YNCSKYIVRCVESALNQTITDLEVCIC-DDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAV- 450 (625)
T ss_dssp SCSEEEEEEE-SSCTTTHHHHHHHHHSSSCCSEEEEEE-EESCSSSHHHHHHHHHTTCTTEEEEEECCCCHHHHHHHHH-
T ss_pred CCeEEEEEeC-CCCHHHHHHHHHHHHhCcCCCeEEEEE-ECcCChhHHHHHHHHHhhCCcEEEEeCCCCCHHHHHHHHH-
Confidence 4555566665 45556666655544 257888764 4676664211 1 11 1123333333333221111111
Q ss_pred cccccCccEEEEecccccCCCCChHHHHHHHHHh-CCcccCCCccCCCCcceeeeeecCCcceeeeeccCCCCCCCCCCC
Q 017018 190 PDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKH-GLDISQPGLEPNNGLTWQMTKRRGDQEVHKVTEEKPGWCSDPHLP 268 (379)
Q Consensus 190 Pdiva~YDYIflwDDDL~vd~f~i~ry~~Ivr~~-gLeISQPALd~~S~ish~iT~R~~~~~vHr~~~~~~g~C~~~~~p 268 (379)
-.+..|||++.|+|..++...++++++.+++. +..+..+... .....+..+.. ....+..-.+. .
T Consensus 451 --~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~---------~~~~~~~~~~~-~~~~~~~~~~~-~- 516 (625)
T 2z86_A 451 --RLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNR---------NIDREGNLISN-GYNWPIYSREK-L- 516 (625)
T ss_dssp --HHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEE---------EECTTSCEEEE-CCCCSSCCHHH-H-
T ss_pred --HhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeE---------EECCCCCEecc-CcccccCCHHH-H-
Confidence 12578999999999999888888888777543 3333332211 00001111111 00000000000 0
Q ss_pred CccceEEEecccccHHHHHHhhhhhcCCCcccchhhHhhhHhhcCCCCeEEEEeeeeEEee
Q 017018 269 PCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDSQWIIHQ 329 (379)
Q Consensus 269 pcT~FVEiMAPVFSR~Awrcvw~miqnDLvhGWGLDf~~~~c~~~~~~kiGVVDa~~VvH~ 329 (379)
..+++-..+-+|+|++|..+-.+ ..++. .+-|+.+..-+.... ++..++...+.|+
T Consensus 517 -~~~~~~~~~~~~~r~~~~~~ggf-d~~~~--~~eD~dl~~r~~~~g-~~~~~~~~~~~~r 572 (625)
T 2z86_A 517 -TSAMICHHFRMFTARAWNLTEGF-NESIS--NAVDYDMYLKLSEVG-PFKHINKICYNRV 572 (625)
T ss_dssp -TTSCCCCSCEEEEHHHHTTTTCC-CSSCS--SCHHHHHHHHHTTTS-CEEEEEEEEEEEE
T ss_pred -hhcccCCceEEEEHHHHHHhCCC-CCccC--ChHHHHHHHHHHHhC-CEEEeCCcEEEEE
Confidence 00111111237899998776443 23333 446765543333233 8999988766655
No 8
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=70.54 E-value=4 Score=42.73 Aligned_cols=132 Identities=9% Similarity=-0.094 Sum_probs=68.0
Q ss_pred CccEEEEecccccCCCCChHHHHHHHHHh-CCcccCCCcc-CCC-Cccee--eeeecCCcceeee--------eccCCCC
Q 017018 195 AYEYIFIWDEDLGVEHFNGDKYMELVKKH-GLDISQPGLE-PNN-GLTWQ--MTKRRGDQEVHKV--------TEEKPGW 261 (379)
Q Consensus 195 ~YDYIflwDDDL~vd~f~i~ry~~Ivr~~-gLeISQPALd-~~S-~ish~--iT~R~~~~~vHr~--------~~~~~g~ 261 (379)
.+|||++.|+|..++...++++++.++.. ...+..|.+- .+. ..-|. -............ ....+-.
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~l~ 347 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLN 347 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCSCEETTTSCSS
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccccccccccccccccc
Confidence 69999999999999999999999999876 3445554332 111 00000 0000000000000 0000000
Q ss_pred -----CCCCCCCCccceEEEecccccHHHHHHhhhhhcCCCcccchhhHhhhHhhcCCCCeEEEEeeeeEEee
Q 017018 262 -----CSDPHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDSQWIIHQ 329 (379)
Q Consensus 262 -----C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqnDLvhGWGLDf~~~~c~~~~~~kiGVVDa~~VvH~ 329 (379)
+...+.+..+.++-..+-+|+|++++.+=.+. +... ++=|.-|..-+.....++..+....|.|.
T Consensus 348 ~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd-~~F~--~~ED~Dl~lR~~~~G~ki~~~p~a~V~H~ 417 (657)
T 4fix_A 348 DNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPL-PLFI--KWDDADYGLRAAEHGYPTVTLPGAAIWHM 417 (657)
T ss_dssp CSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCC-SCSS--SSHHHHHHHHHHHTTCCEEEEEEEEEEEC
T ss_pred cccccccccccceeccccchhHhHhhHHHHHHhCCCh-hHhc--cCcHHHHHHHHHHcCCeEEEECCEEEEEc
Confidence 00000011112222223578999998874342 3333 33565554333335578999999999995
No 9
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=66.74 E-value=4 Score=34.74 Aligned_cols=108 Identities=19% Similarity=0.179 Sum_probs=61.4
Q ss_pred CCceEEEEEeccccccchhHHhhcc----ccCcEEEEEEeCCCCCccccc--ccc---CccEEEEEeccccccccccccC
Q 017018 119 KPKYLLTITVGLNQKKNIDRMVKKF----SEDFQIMLFHYDGQTSQWDEF--EWS---KSAIHVSIRRQTKWWYAKRFLH 189 (379)
Q Consensus 119 ~~kyLv~~~VG~~qk~~Vd~~v~kf----~~~F~v~LfhYDG~~~~w~d~--~Ws---~~aihv~~~kqtKWw~akRfLH 189 (379)
.++.-|.+++ ++..+.+.+.++-. ..+|.|++ .=||+.|+=.++ ++. .+...+...++++ +.....
T Consensus 4 ~p~vsViIp~-yn~~~~l~~~l~Sl~~q~~~~~eiIv-vDd~S~d~t~~~~~~~~~~~~~i~~i~~~n~G~---~~a~N~ 78 (240)
T 3bcv_A 4 IPKVSVIVPI-YNVEKYLDQCVQALLAQTLSDIEIIL-IDDESPDNCPKICDDYAAQYPNIKVIHKKNAGL---GMACNS 78 (240)
T ss_dssp CCSEEEEEEE-SSCTTTHHHHHHHHHTCSSSSEEEEE-EECCCSSSHHHHHHHHHHHCSSEEEEECCCCCH---HHHHHH
T ss_pred CCcEEEEEec-CCCHHHHHHHHHHHHhCcCCCeEEEE-EECCCCcCHHHHHHHHHhhCCCEEEEECCCCCh---HHHHHH
Confidence 3456666666 44445555555543 24778775 557877752211 111 1222222222221 111100
Q ss_pred cccccCccEEEEecccccCCCCChHHHHHHHHHhCCcccCCC
Q 017018 190 PDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPG 231 (379)
Q Consensus 190 Pdiva~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPA 231 (379)
-=-.+..|||++.|+|..++...++++++.+++.+.++...+
T Consensus 79 g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~ 120 (240)
T 3bcv_A 79 GLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTG 120 (240)
T ss_dssp HHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC-
T ss_pred HHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEe
Confidence 011256899999999999999999999999998777766544
No 10
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=58.45 E-value=16 Score=35.23 Aligned_cols=103 Identities=12% Similarity=0.135 Sum_probs=62.2
Q ss_pred CCceEEEEEeccccccchhHHhhccc--cCcEEEEEEeCCCCCcccccccc---CccEEEEEeccccccccccccCcccc
Q 017018 119 KPKYLLTITVGLNQKKNIDRMVKKFS--EDFQIMLFHYDGQTSQWDEFEWS---KSAIHVSIRRQTKWWYAKRFLHPDVV 193 (379)
Q Consensus 119 ~~kyLv~~~VG~~qk~~Vd~~v~kf~--~~F~v~LfhYDG~~~~w~d~~Ws---~~aihv~~~kqtKWw~akRfLHPdiv 193 (379)
..++-+.|-+- +....+.++|+..+ +.-+=+++..-.....--+..|. ..++.|....+.+=-.-.||+-.+ .
T Consensus 27 ~~~FTvvi~ty-~R~~~L~~lv~~~~~~~~v~~IvVvWn~~~~~pp~~~~~~~~~~~vpv~v~~~~~nsLnnRF~p~~-~ 104 (293)
T 1omz_A 27 LDSFTLIMQTY-NRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTANKMRNRLQVFP-E 104 (293)
T ss_dssp TTCEEEEEEES-SCHHHHHHHHHHHTTSTTEEEEEEEECCTTCCCTHHHHHHTCCCSSCEEEEECSSCCGGGGGSCCT-T
T ss_pred CCceEEEEEee-cccHHHHHHHHHHhcCCCCCeEEEEeCCCCCCCChhhccccCCCCccEEEEeCCCCchhhccCCCc-c
Confidence 34666666543 34555666666554 44444555554421111222342 224555555555545678887433 3
Q ss_pred cCccEEEEecccccCCCCChHHHHHHHHHh
Q 017018 194 AAYEYIFIWDEDLGVEHFNGDKYMELVKKH 223 (379)
Q Consensus 194 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~ 223 (379)
-.-|+||..|||+.++..+++.=|++-+++
T Consensus 105 i~T~AVLslDDDv~l~~~el~faF~vWr~~ 134 (293)
T 1omz_A 105 VETNAVLMVDDDTLISAQDLVFAFSIWQQF 134 (293)
T ss_dssp CCSSEEEEECTTEEECHHHHHHHHHHHTTS
T ss_pred CCcCEEEEEcCCCCCCHHHHHHHHHHHHHC
Confidence 458999999999999999999888887654
No 11
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=47.61 E-value=15 Score=36.22 Aligned_cols=183 Identities=14% Similarity=0.033 Sum_probs=94.8
Q ss_pred eEEEEEeccccccchhHHhhcc-----ccCcEEEEEEeCCCCCccccc-c---------ccCccEEEEEe-----ccccc
Q 017018 122 YLLTITVGLNQKKNIDRMVKKF-----SEDFQIMLFHYDGQTSQWDEF-E---------WSKSAIHVSIR-----RQTKW 181 (379)
Q Consensus 122 yLv~~~VG~~qk~~Vd~~v~kf-----~~~F~v~LfhYDG~~~~w~d~-~---------Ws~~aihv~~~-----kqtKW 181 (379)
++|.+|+ . .+++..+++.. ..++.|++ .=||++|+=.+. + ...+.+....+ +.+|=
T Consensus 2 slVIiP~-~--eE~I~~vl~~l~~~~~~~~~EIIV-VDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG 77 (397)
T 2bo4_A 2 SLVVFPF-K--HEHPEVLLHNVRVAAAHPRVHEVL-CIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKG 77 (397)
T ss_dssp CEEEEEC-C--SSCHHHHHHHHHHHHHSTTCCEEE-EEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHH
T ss_pred cEEEEeC-C--ccCHHHHHHHHHHhccCCCeEEEE-EECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHH
Confidence 5778886 2 25777777654 24688764 568888853222 1 11223333323 44542
Q ss_pred cccccccCccc-ccCccEEEEeccccc-CCCCChHHHHHHHHHhCCcccCCCccCC---CCcceeeeeecCCcceeeeec
Q 017018 182 WYAKRFLHPDV-VAAYEYIFIWDEDLG-VEHFNGDKYMELVKKHGLDISQPGLEPN---NGLTWQMTKRRGDQEVHKVTE 256 (379)
Q Consensus 182 w~akRfLHPdi-va~YDYIflwDDDL~-vd~f~i~ry~~Ivr~~gLeISQPALd~~---S~ish~iT~R~~~~~vHr~~~ 256 (379)
.=++.=+---+ .+.+|||.+.|-|+. .+...+.++++.+++ |.++..+..... +.+.+.+ .|. .+.. .+
T Consensus 78 ~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~-g~D~V~g~~~r~~~~~~~~~~~-~~~---ll~~-~~ 151 (397)
T 2bo4_A 78 DGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF-GYGLVRHYFPRASTDAMITWMI-TRT---GFAL-LW 151 (397)
T ss_dssp HHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT-TCSEEEEECCCCTTSCHHHHHT-HHH---HHHH-HC
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc-CCCEEEEEeccccCCcHHHHHH-HHH---HHHH-HH
Confidence 11111010011 368999999999996 798899999987754 566655432111 1111100 000 0000 00
Q ss_pred cCCCCCCCCCCCCccceEEEecccccHHHHHHhhhhh-cCCCcccchhhHhhhHhhcCCCCeEEEEe
Q 017018 257 EKPGWCSDPHLPPCAAFVEIMAPVFSREAWRCVWHMI-QNDLVHGWGLDFALRRCVEPAHEKIGVVD 322 (379)
Q Consensus 257 ~~~g~C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~mi-qnDLvhGWGLDf~~~~c~~~~~~kiGVVD 322 (379)
.--.|...+.|- ++|. +|+|++++.+.... .+ ..+|||.|..+...+.....+|.-|.
T Consensus 152 -~~~~~~~i~dp~-sG~~-----a~~R~vl~~l~~~~~~~-~~~~fg~eiel~~~a~~~G~rI~EVp 210 (397)
T 2bo4_A 152 -PHTELSWIEQPL-GGEL-----LMRREVAAMLYEDERVR-RRSDWGIDTLYTFVTVQQGVSIYECY 210 (397)
T ss_dssp -TTSSGGGCSCTT-CCCE-----EEEHHHHHHHHHCHHHH-TCCSTTHHHHHHHHHHHTTCCEEEEE
T ss_pred -HHhhccccccCC-cccE-----EEeHHHHHHHhhhcccC-cCCCcchHHHHHHHHHHcCCEEEEEE
Confidence 001121222232 3443 59999998764310 01 45799999877766544456777665
No 12
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=35.84 E-value=33 Score=36.39 Aligned_cols=124 Identities=14% Similarity=0.008 Sum_probs=67.7
Q ss_pred cCccEEEEecccccCCCCChHHHHHHHHH-hCCcccCCCccCCC-C-cceeee--ee--cCCcceeeeeccC-CCCCCCC
Q 017018 194 AAYEYIFIWDEDLGVEHFNGDKYMELVKK-HGLDISQPGLEPNN-G-LTWQMT--KR--RGDQEVHKVTEEK-PGWCSDP 265 (379)
Q Consensus 194 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~-~gLeISQPALd~~S-~-ish~iT--~R--~~~~~vHr~~~~~-~g~C~~~ 265 (379)
+.+|||.+.|+|..++...++++++.+++ .+..+.|....... . +..... .+ .....++...... ..+
T Consensus 237 a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 312 (802)
T 4hg6_A 237 LKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRW---- 312 (802)
T ss_dssp CCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHT----
T ss_pred cCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhc----
Confidence 57999999999999999999999998854 45665555332211 0 000000 00 0000000000000 000
Q ss_pred CCCCccceEEEecccccHHHHHHhhhhhcCCCcccchhhHhhhHhhcCCCCeEEEEeeeeEEee
Q 017018 266 HLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDSQWIIHQ 329 (379)
Q Consensus 266 ~~ppcT~FVEiMAPVFSR~Awrcvw~miqnDLvhGWGLDf~~~~c~~~~~~kiGVVDa~~VvH~ 329 (379)
..+ ++...+-+|+|++++.+=.+ ..+. .+=|+.+...+.....++..++...+.|.
T Consensus 313 ~~~----~~~G~~~~~Rr~al~~vGgf-~~~~---~~ED~~l~~rl~~~G~ri~~~~~~~~~~~ 368 (802)
T 4hg6_A 313 GGA----FFCGSAAVLRRRALDEAGGF-AGET---ITEDAETALEIHSRGWKSLYIDRAMIAGL 368 (802)
T ss_dssp TCC----CCCSSSEEEEHHHHHHHTTC-CCSS---SSHHHHHHHHHHTTTCCEEECCCCCEEEC
T ss_pred CCc----eecccchhhhHHHHHHcCCc-CCCC---cchHHHHHHHHHHcCCeEEEecCCEEEec
Confidence 011 11223457999999877333 2222 35677776666556678998887777775
No 13
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=30.99 E-value=10 Score=39.23 Aligned_cols=34 Identities=18% Similarity=0.206 Sum_probs=0.0
Q ss_pred cCccEEEEecccccCCCCChHHHHHHHHHhCCcc
Q 017018 194 AAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDI 227 (379)
Q Consensus 194 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeI 227 (379)
+..|||++.|+|-.++...++++++.++..++-+
T Consensus 82 A~gdyI~flD~Dd~~~p~~l~~l~~~l~~~d~v~ 115 (729)
T 3l7i_A 82 VETPYFMFLDADDELASYAITFYLEKFNNTDGLI 115 (729)
T ss_dssp ----------------------------------
T ss_pred ccCCEEEEECCCCCCChhHHHHHHHHhcCCCEEE
Confidence 5789999999999998888888888887444333
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=30.12 E-value=41 Score=29.73 Aligned_cols=29 Identities=14% Similarity=0.244 Sum_probs=26.6
Q ss_pred cCccEEEEecccccCCCCChHHHHHHHHH
Q 017018 194 AAYEYIFIWDEDLGVEHFNGDKYMELVKK 222 (379)
Q Consensus 194 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~ 222 (379)
+.-|||+|.|.|..++.-.++++++.+++
T Consensus 73 A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 73 CKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred cCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 56899999999999999889999999887
No 15
>2ls4_A High affinity copper uptake protein 1; HCTR1 TMDS, oligomerization, metal transport; NMR {Homo sapiens}
Probab=35.70 E-value=11 Score=24.36 Aligned_cols=15 Identities=40% Similarity=0.651 Sum_probs=12.2
Q ss_pred HHHHHHHHHHhheeE
Q 017018 19 LIITTFIGVLIGYFV 33 (379)
Q Consensus 19 ~~~~~~~~~~~g~~~ 33 (379)
+++++++|+.+|+|+
T Consensus 5 l~iavvlGa~~Gyf~ 19 (26)
T 2ls4_A 5 LCIAVAAGAGTGYFL 19 (26)
Confidence 577888888888876
No 16
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=28.37 E-value=20 Score=33.22 Aligned_cols=38 Identities=21% Similarity=0.441 Sum_probs=27.4
Q ss_pred ccccccCcccccCccEEEEeccc---ccCCCCChHHHHHHHHHhCCcc
Q 017018 183 YAKRFLHPDVVAAYEYIFIWDED---LGVEHFNGDKYMELVKKHGLDI 227 (379)
Q Consensus 183 ~akRfLHPdiva~YDYIflwDDD---L~vd~f~i~ry~~Ivr~~gLeI 227 (379)
.+.+|+- -..|||+++.|-| ++.+..++-|++ +.|.+|
T Consensus 44 lv~~Fl~---~~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DV 84 (203)
T 2c0n_A 44 ALDMFLE---MKDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDV 84 (203)
T ss_dssp HHHHHHH---CTTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSE
T ss_pred HHHHHHh---cCCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCE
Confidence 3455552 1469999999999 888888888887 445554
No 17
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=25.35 E-value=41 Score=25.27 Aligned_cols=14 Identities=21% Similarity=0.548 Sum_probs=10.2
Q ss_pred EEEEEeCCCCCccc
Q 017018 149 IMLFHYDGQTSQWD 162 (379)
Q Consensus 149 v~LfhYDG~~~~w~ 162 (379)
.+|+||||-.+.|+
T Consensus 42 ~~~VhfdGw~~~~D 55 (69)
T 3sd4_A 42 KVLIHFKRWNHRYD 55 (69)
T ss_dssp EEEEEETTSCGGGC
T ss_pred EEEEEeCCCCCCCC
Confidence 46899999666554
No 18
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=20.33 E-value=54 Score=26.10 Aligned_cols=15 Identities=33% Similarity=0.702 Sum_probs=11.3
Q ss_pred EEEEEeCCCCCcccc
Q 017018 149 IMLFHYDGQTSQWDE 163 (379)
Q Consensus 149 v~LfhYDG~~~~w~d 163 (379)
-+|+||||-.+.|++
T Consensus 49 ~v~VHfdGW~~~yDe 63 (88)
T 2eqm_A 49 KMLVHFERWSHRYDE 63 (88)
T ss_dssp EEEEEESSSTTTEEE
T ss_pred EEEEEECCCCCcccE
Confidence 578999997666654
Done!