BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017019
(379 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9R078|AAKB1_MOUSE 5'-AMP-activated protein kinase subunit beta-1 OS=Mus musculus
GN=Prkab1 PE=1 SV=2
Length = 270
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 22/126 (17%)
Query: 261 TEINKAEKLISDKDEELIAAEESLSGLEVVEIQ-------YSGDGEIVEVAGSFNGWHHR 313
+I +E++ + + EE +A + L + Q ++G G+ V ++GSFN W
Sbjct: 44 ADIFHSEEIKAPEKEEFLAWQHDLEANDKAPAQARPTVFRWTGGGKEVYLSGSFNNW--- 100
Query: 314 IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVTKG-GIC 372
S + RS+ + + +L L G ++ KF VDGQW DP VT G
Sbjct: 101 ---------SKLPLTRSQNN--FVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTV 149
Query: 373 NNILRV 378
NNI++V
Sbjct: 150 NNIIQV 155
>sp|P78789|YC63_SCHPO Uncharacterized protein C1919.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1919.03c PE=1 SV=2
Length = 298
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 14/66 (21%)
Query: 292 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKF 351
I++ G GE+V V GSF+ W +I++ KS ++ +L L PGT KF
Sbjct: 103 IRWRGGGEVVYVTGSFSRWKKKIQL--------------LKSEDYTVLLQLRPGTQRFKF 148
Query: 352 IVDGQW 357
+VDG W
Sbjct: 149 LVDGIW 154
>sp|P80386|AAKB1_RAT 5'-AMP-activated protein kinase subunit beta-1 OS=Rattus norvegicus
GN=Prkab1 PE=1 SV=4
Length = 270
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 22/126 (17%)
Query: 261 TEINKAEKLISDKDEELIAAEESLSGLEVVEIQ-------YSGDGEIVEVAGSFNGWHHR 313
+I E++ + + EE +A + L E Q ++G G+ V ++GSFN W
Sbjct: 44 ADIFHTEEMKAPEKEEFLAWQHDLEVNEKAPAQARPTVFRWTGGGKEVYLSGSFNNW--- 100
Query: 314 IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVT-KGGIC 372
S + RS+ + + +L L G ++ KF VDGQW DP VT + G
Sbjct: 101 ---------SKLPLTRSQNN--FVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTV 149
Query: 373 NNILRV 378
NNI++V
Sbjct: 150 NNIIQV 155
>sp|Q9Y478|AAKB1_HUMAN 5'-AMP-activated protein kinase subunit beta-1 OS=Homo sapiens
GN=PRKAB1 PE=1 SV=4
Length = 270
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 22/126 (17%)
Query: 261 TEINKAEKLISDKDEELIAAEESL-------SGLEVVEIQYSGDGEIVEVAGSFNGWHHR 313
++ +E++ + + EE +A + L + +++G G+ V ++GSFN W
Sbjct: 44 ADLFHSEEIKAPEKEEFLAWQHDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNW--- 100
Query: 314 IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVT-KGGIC 372
S + RS + + +L L G ++ KF VDGQW DP VT + G
Sbjct: 101 ---------SKLPLTRSHNN--FVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTV 149
Query: 373 NNILRV 378
NNI++V
Sbjct: 150 NNIIQV 155
>sp|P80387|AAKB1_PIG 5'-AMP-activated protein kinase subunit beta-1 (Fragment) OS=Sus
scrofa GN=PRKAB1 PE=1 SV=1
Length = 122
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 22/126 (17%)
Query: 261 TEINKAEKLISDKDEELIAAEESL-------SGLEVVEIQYSGDGEIVEVAGSFNGWHHR 313
++ +E++ + + EE +A + L + +++G G+ V ++GSFN W
Sbjct: 9 ADLYHSEEIKAPEKEEFLAWQHDLEVNDKASAQARPTVFRWTGGGKEVYLSGSFNNW--- 65
Query: 314 IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVT-KGGIC 372
S + RS + + +L L G ++ KF+VDGQW DP VT + G
Sbjct: 66 ---------SKLPLTRSHNNFV--AILDLPEGEHQYKFLVDGQWTHDPSEPVVTSQLGTV 114
Query: 373 NNILRV 378
NNI++V
Sbjct: 115 NNIIQV 120
>sp|Q5R801|AAKB1_PONAB 5'-AMP-activated protein kinase subunit beta-1 OS=Pongo abelii
GN=PRKAB1 PE=2 SV=3
Length = 270
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 22/126 (17%)
Query: 261 TEINKAEKLISDKDEELIAAEESL-------SGLEVVEIQYSGDGEIVEVAGSFNGWHHR 313
++ +E++ + + EE +A + L + +++G G+ V ++GSFN W
Sbjct: 44 ADLFHSEEIKAPEKEEFLAWQRDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNW--- 100
Query: 314 IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVT-KGGIC 372
S + RS + + +L L G ++ KF VDGQW DP VT + G
Sbjct: 101 ---------SKLPLTRSHNN--FVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTV 149
Query: 373 NNILRV 378
NNI++V
Sbjct: 150 NNIIQV 155
>sp|Q5BIS9|AAKB1_BOVIN 5'-AMP-activated protein kinase subunit beta-1 OS=Bos taurus
GN=PRKAB1 PE=2 SV=3
Length = 270
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 22/126 (17%)
Query: 261 TEINKAEKLISDKDEELIAAEESL-------SGLEVVEIQYSGDGEIVEVAGSFNGWHHR 313
++ +E++ + + EE +A + L + +++G G+ V ++GSFN W
Sbjct: 44 ADLFHSEEIKAPEKEEFLAWQHDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNWSKL 103
Query: 314 IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVTKG-GIC 372
PL +R + +L L G ++ KF VDGQW DP VT G
Sbjct: 104 ----PL----------TRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPVVTSQLGTV 149
Query: 373 NNILRV 378
NN+++V
Sbjct: 150 NNVIQV 155
>sp|O43741|AAKB2_HUMAN 5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens
GN=PRKAB2 PE=1 SV=1
Length = 272
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 14/88 (15%)
Query: 292 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKF 351
I++S G+ V ++GSFN W +I + I+S + +L L G ++ KF
Sbjct: 81 IRWSEGGKEVFISGSFNNWSTKIPL-----------IKSHND--FVAILDLPEGEHQYKF 127
Query: 352 IVDGQWKVDPQRESVTKG-GICNNILRV 378
VDGQW DP VT G NN++ V
Sbjct: 128 FVDGQWVHDPSEPVVTSQLGTINNLIHV 155
>sp|Q9QZH4|AAKB2_RAT 5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus
GN=Prkab2 PE=1 SV=1
Length = 271
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Query: 292 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKF 351
I++S G+ V ++GSFN W +I + I+S + +L L G ++ KF
Sbjct: 80 IRWSEGGKEVFISGSFNNWSTKIPL-----------IKSHND--FVAILDLPEGEHQYKF 126
Query: 352 IVDGQWKVDPQRESVT-KGGICNNILRV 378
VDGQW DP VT + G NN++ V
Sbjct: 127 FVDGQWVHDPSEPVVTSQLGTINNLIHV 154
>sp|Q6PAM0|AAKB2_MOUSE 5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus
GN=Prkab2 PE=1 SV=1
Length = 271
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Query: 292 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKF 351
I++S G+ V ++GSFN W +I + I+S + +L L G ++ KF
Sbjct: 80 IRWSEGGKEVFISGSFNNWSTKIPL-----------IKSHND--FVAILDLPEGEHQYKF 126
Query: 352 IVDGQWKVDPQRESVT-KGGICNNILRV 378
VDGQW DP VT + G NN++ V
Sbjct: 127 FVDGQWVHDPSEPVVTSQLGTINNLIHV 154
>sp|Q944A6|SNF4_ARATH Sucrose nonfermenting 4-like protein OS=Arabidopsis thaliana
GN=SNF4 PE=1 SV=1
Length = 487
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 298 GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQW 357
G V ++GSF W + M PL + + + L PG ++ KF VDG+W
Sbjct: 31 GRRVFLSGSFTRWTEHVPMSPLEGCPTV----------FQVICNLTPGYHQYKFFVDGEW 80
Query: 358 KVDPQRESVT-KGGICNNIL 376
+ D + V+ GG+ N I
Sbjct: 81 RHDEHQPFVSGNGGVVNTIF 100
>sp|Q04739|GAL83_YEAST SNF1 protein kinase subunit beta-3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GAL83 PE=1 SV=1
Length = 417
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 290 VEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEI 349
V+I + G V V GSF GW I + P+P + L L L PGT+
Sbjct: 164 VDITWQQGGNKVYVTGSFTGWRKMIGLVPVPG----------QPGLMHVKLQLPPGTHRF 213
Query: 350 KFIVDGQWK 358
+FIVD + +
Sbjct: 214 RFIVDNELR 222
>sp|P34164|SIP2_YEAST SNF1 protein kinase subunit beta-2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SIP2 PE=1 SV=3
Length = 415
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Query: 290 VEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEI 349
VEI++ G V V GSF W I + P S + + L L PGT+
Sbjct: 166 VEIRWQQGGSKVYVTGSFTKWRKMIGLIP----------DSDNNGSFHVKLRLLPGTHRF 215
Query: 350 KFIVDGQWKV 359
+FIVD + +V
Sbjct: 216 RFIVDNELRV 225
>sp|Q9SCY5|KINB2_ARATH SNF1-related protein kinase regulatory subunit beta-2
OS=Arabidopsis thaliana GN=KINB2 PE=1 SV=1
Length = 289
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 15/72 (20%)
Query: 292 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYP-GTYEIK 350
I + G+ + V GS++ W R ++ RS K T++ + P G YE +
Sbjct: 106 ITWCHGGKEIAVEGSWDNWKTRSRLQ-----------RSGKD---FTIMKVLPSGVYEYR 151
Query: 351 FIVDGQWKVDPQ 362
FIVDGQW+ P+
Sbjct: 152 FIVDGQWRHAPE 163
>sp|Q7SFQ9|MRS2_NEUCR Mitochondrial inner membrane magnesium transporter mrs2
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=mrs2 PE=3 SV=1
Length = 547
Score = 36.2 bits (82), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 238 LSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEESLSGLEVVEIQ---Y 294
LS L++ I++EKL + ++ +K V+ + KL+ D EEL+ A++ L+ + + E Y
Sbjct: 317 LSELEDDIDREKLRVLLVLSKRVSTFEQKAKLVRDAIEELLEADDDLASMYLTEKTHDLY 376
Query: 295 SGDGEIVEV 303
G+ + E+
Sbjct: 377 RGEDDHTEI 385
>sp|Q4I298|MRS2_GIBZE Mitochondrial inner membrane magnesium transporter MRS2
OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=MRS2 PE=3 SV=1
Length = 498
Score = 36.2 bits (82), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 238 LSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEESLSGLEVVEIQ---Y 294
LS L++ I++ KL + ++ +K V+ + KL+ D E+L+ A++ L+ + + E Y
Sbjct: 268 LSELEDDIDRHKLRMLLILSKRVSTFEQKAKLVRDAIEDLLEADDDLADMYLTEKTHDLY 327
Query: 295 SGDGEIVEVAGSFNGWH 311
G+ + EV +H
Sbjct: 328 RGEDDHTEVEMLLESYH 344
>sp|Q6C8H7|LPE10_YARLI Mitochondrial inner membrane magnesium transporter LPE10
OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=LPE10 PE=3 SV=1
Length = 455
Score = 35.8 bits (81), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 238 LSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEESLSGLEVVE 291
LS L++ I++EKL ++Q+K ++ + LI D +EL+ +E L+GL + E
Sbjct: 247 LSELEQDIDREKLRHLLIQSKKLSAFLQKATLIRDVIDELLDTDEDLAGLYLTE 300
>sp|Q7V5U2|ATPB_PROMM ATP synthase subunit beta OS=Prochlorococcus marinus (strain MIT
9313) GN=atpD PE=3 SV=1
Length = 488
Score = 35.4 bits (80), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 131 LSDPSFVGEVSPNLNGHYEKADMEEKVANF--IQNGDLDIIEDRAMILNG 178
LS P FV E+ ++G Y K +EE +A F I +G+LD + ++A L G
Sbjct: 423 LSQPFFVAEIFTGMSGKYVK--LEETIAGFNMIMSGELDHLPEQAFYLVG 470
>sp|Q46J68|ATPB_PROMT ATP synthase subunit beta OS=Prochlorococcus marinus (strain
NATL2A) GN=atpD PE=3 SV=1
Length = 488
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 131 LSDPSFVGEVSPNLNGHYEKADMEEKVANFIQNGDLDIIEDRAMILNGS 179
LS P FV E+ ++G Y K + K N I +G+LD + ++A L GS
Sbjct: 423 LSQPFFVAEIFTGMSGKYVKLEDTIKGFNMILSGELDQLPEQAFYLVGS 471
>sp|A2C4I4|ATPB_PROM1 ATP synthase subunit beta OS=Prochlorococcus marinus (strain
NATL1A) GN=atpD PE=3 SV=1
Length = 488
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 131 LSDPSFVGEVSPNLNGHYEKADMEEKVANFIQNGDLDIIEDRAMILNGS 179
LS P FV E+ ++G Y K + K N I +G+LD + ++A L GS
Sbjct: 423 LSQPFFVAEIFTGMSGKYVKLEDTIKGFNMILSGELDQLPEQAFYLVGS 471
>sp|Q318V4|ATPB_PROM9 ATP synthase subunit beta OS=Prochlorococcus marinus (strain MIT
9312) GN=atpD PE=3 SV=1
Length = 486
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 131 LSDPSFVGEVSPNLNGHYEKADMEEKVANF--IQNGDLDIIEDRAMILNG 178
LS P FV E+ ++G Y K +EE +A F I +G+LD + ++A L G
Sbjct: 423 LSQPFFVAEIFTGMSGKYVK--LEETIAGFNMILSGELDDLPEQAFYLVG 470
>sp|A9BCC6|ATPB_PROM4 ATP synthase subunit beta OS=Prochlorococcus marinus (strain MIT
9211) GN=atpD PE=3 SV=1
Length = 488
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 131 LSDPSFVGEVSPNLNGHYEKADMEEKVANF--IQNGDLDIIEDRAMILNG 178
LS P FV E+ ++G Y K +EE +A F I +G+LD + ++A L G
Sbjct: 423 LSQPFFVAEIFTGMSGKYVK--LEETIAGFNMILSGELDNLPEQAFYLVG 470
>sp|P11048|LMNA_XENLA Lamin-A OS=Xenopus laevis GN=lmna PE=2 SV=1
Length = 665
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 219 ENQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELI 278
E Q EI + + +LS+L++Q+ + L L+ E + + +L++DKD E+
Sbjct: 283 EAQEEIQQSRIRIDSLSAQLSQLQKQLAAREAKLRDLEDAYARERDSSRRLLADKDREMA 342
Query: 279 AAEESLSG-----LEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSS 322
+ E+++I+ + D EI G R+++ P P++
Sbjct: 343 EMRARMQQQLDEYQELLDIKLALDMEINAYRKLLEGEEERLRLSPSPNT 391
>sp|Q7VA76|ATPB_PROMA ATP synthase subunit beta OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=atpD PE=3 SV=1
Length = 488
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 131 LSDPSFVGEVSPNLNGHYEKADMEEKVANF--IQNGDLDIIEDRAMILNGSALTSKQIA 187
LS P FV E+ ++G Y K +E+ +A F I +G+LD + ++A L G+ K+ A
Sbjct: 423 LSQPFFVAEIFTGMSGKYVK--LEDTIAGFNMILSGELDDLPEQAFYLVGNITEVKEKA 479
>sp|Q6EIZ1|K22E_CANFA Keratin, type II cytoskeletal 2 epidermal OS=Canis familiaris
GN=KRT2 PE=2 SV=1
Length = 633
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 218 RENQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEEL 277
+E ++EI L M+ + + E++ +K+Q + + A++ + K + A+ +SD +E L
Sbjct: 402 KEVKMEISELNRMIQRLQGEIAHVKKQCKSVQEAIAEAEQKGEHAVKDAQGKLSDLEEAL 461
Query: 278 IAAEESLSGL-----EVVEIQYSGDGEIVEVAGSFNGWHHRIKMD 317
A E L+GL E++ ++ + D EI G R+ D
Sbjct: 462 QQAREDLAGLLRDYQELMNVKLALDVEIATYRKLLEGEECRMSGD 506
>sp|Q8T6J1|ABCA6_DICDI ABC transporter A family member 6 OS=Dictyostelium discoideum
GN=abcA6 PE=3 SV=1
Length = 1631
Score = 32.0 bits (71), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 82 LNCQNKNVNNSVENISLSTDVSFVKNPSKGSCIKTDLHSDIYSLPPTESLSD-PSFVGEV 140
L C NK + N+ + + F+KN G+ I TD +++ PTESLS+ P F E
Sbjct: 721 LTC-NKKLENASNGFNTNQVSEFIKNFIPGASILTDSGAELSYRLPTESLSNFPQFFTEF 779
Query: 141 SPNLN 145
NL+
Sbjct: 780 DLNLS 784
>sp|Q74KB1|RNY_LACJO Ribonuclease Y OS=Lactobacillus johnsonii (strain CNCM I-12250 /
La1 / NCC 533) GN=rny PE=3 SV=1
Length = 540
Score = 32.0 bits (71), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 43/69 (62%), Gaps = 12/69 (17%)
Query: 214 EARRRENQL-----EIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEK 268
E R+EN+L IDH +L QK+ +L++ + QI+K LQ + + + N+A++
Sbjct: 103 EVSRQENRLLQREDAIDHKDSLLDQKDSQLTQKENQIKK-------LQAQVLEKENRADQ 155
Query: 269 LISDKDEEL 277
L+++++++L
Sbjct: 156 LVTEREKKL 164
>sp|Q28298|RRBP1_CANFA Ribosome-binding protein 1 OS=Canis familiaris GN=RRBP1 PE=2 SV=1
Length = 1534
Score = 32.0 bits (71), Expect = 8.6, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 206 EGADFDSSEARRRENQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQT---KAVTE 262
+ D ++A R E+Q + L+ + E E + LKE +E++K+ + L+ KA+
Sbjct: 1100 QARDTQDAQASRAEHQARLKELESQVWCLEKEATELKEAVEQQKVKNNDLREKNWKAMEA 1159
Query: 263 INKAEKLISDKDEELI-AAEESLSGLEVVEIQ 293
+ AE+ +K L A EES L + E Q
Sbjct: 1160 LASAERACEEKLRSLTQAKEESEKQLSLTEAQ 1191
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.130 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,931,588
Number of Sequences: 539616
Number of extensions: 5556541
Number of successful extensions: 22263
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 21771
Number of HSP's gapped (non-prelim): 672
length of query: 379
length of database: 191,569,459
effective HSP length: 119
effective length of query: 260
effective length of database: 127,355,155
effective search space: 33112340300
effective search space used: 33112340300
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)