Query 017019
Match_columns 379
No_of_seqs 137 out of 799
Neff 3.2
Searched_HMMs 29240
Date Mon Mar 25 07:36:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017019.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017019hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nme_A Ptpkis1 protein, SEX4 g 99.9 3.2E-23 1.1E-27 194.2 10.6 114 255-379 128-253 (294)
2 1z0n_A 5'-AMP-activated protei 99.9 7.8E-23 2.7E-27 165.3 9.8 82 284-379 7-89 (96)
3 2qlv_B Protein SIP2, protein S 99.9 1E-22 3.5E-27 190.2 11.1 84 286-379 2-86 (252)
4 4aee_A Alpha amylase, catalyti 99.5 1.2E-14 4.1E-19 148.9 8.2 79 285-376 15-102 (696)
5 4aef_A Neopullulanase (alpha-a 99.3 8.2E-12 2.8E-16 126.4 8.4 68 287-367 16-84 (645)
6 3c8d_A Enterochelin esterase; 98.3 1.1E-06 3.8E-11 84.1 8.4 81 285-378 28-149 (403)
7 2z0b_A GDE5, KIAA1434, putativ 98.3 2.6E-06 9E-11 72.1 8.3 71 286-364 7-102 (131)
8 1ac0_A Glucoamylase; hydrolase 98.0 4E-06 1.4E-10 67.9 4.0 75 286-368 5-93 (108)
9 1m7x_A 1,4-alpha-glucan branch 97.7 0.00011 3.6E-09 74.8 9.4 68 287-366 24-99 (617)
10 3k1d_A 1,4-alpha-glucan-branch 97.5 0.00014 4.9E-09 76.5 7.7 69 287-367 135-211 (722)
11 3aml_A OS06G0726400 protein; s 97.4 0.00017 5.8E-09 76.0 6.8 63 288-363 65-141 (755)
12 1bf2_A Isoamylase; hydrolase, 96.4 0.0023 7.9E-08 66.9 5.0 56 289-357 17-85 (750)
13 2wsk_A Glycogen debranching en 96.3 0.004 1.4E-07 64.0 6.0 54 289-356 20-77 (657)
14 1qho_A Alpha-amylase; glycosid 96.3 0.012 4.2E-07 60.3 9.4 71 286-368 580-673 (686)
15 3vgf_A Malto-oligosyltrehalose 96.3 0.0022 7.5E-08 64.5 3.6 61 289-365 10-73 (558)
16 1cyg_A Cyclodextrin glucanotra 96.2 0.018 6.3E-07 59.0 10.1 74 286-368 578-667 (680)
17 2vr5_A Glycogen operon protein 96.0 0.0068 2.3E-07 63.1 6.1 55 289-357 30-91 (718)
18 2bhu_A Maltooligosyltrehalose 96.0 0.0046 1.6E-07 63.0 4.6 61 289-366 35-96 (602)
19 2vn4_A Glucoamylase; hydrolase 95.9 0.018 6.2E-07 59.4 8.6 73 288-368 497-583 (599)
20 3bmv_A Cyclomaltodextrin gluca 95.7 0.023 7.7E-07 58.3 8.0 74 286-368 582-670 (683)
21 1d3c_A Cyclodextrin glycosyltr 95.5 0.029 9.8E-07 57.6 8.0 74 286-368 585-673 (686)
22 4aio_A Limit dextrinase; hydro 95.3 0.019 6.4E-07 58.9 6.0 54 289-355 137-194 (884)
23 2laa_A Beta/alpha-amylase; SBD 95.3 0.039 1.3E-06 45.9 6.6 65 288-365 5-77 (104)
24 1vem_A Beta-amylase; beta-alph 95.2 0.039 1.3E-06 56.1 7.8 72 286-368 418-506 (516)
25 2e8y_A AMYX protein, pullulana 95.2 0.034 1.2E-06 57.7 7.4 65 289-366 114-185 (718)
26 1wzl_A Alpha-amylase II; pullu 95.0 0.029 9.9E-07 56.4 6.0 60 287-354 22-87 (585)
27 2fhf_A Pullulanase; multiple d 94.9 0.022 7.6E-07 62.6 5.3 66 289-366 305-384 (1083)
28 1j0h_A Neopullulanase; beta-al 93.9 0.042 1.5E-06 55.2 4.5 61 286-354 21-89 (588)
29 2wan_A Pullulanase; hydrolase, 93.8 0.075 2.5E-06 57.2 6.3 62 289-364 326-397 (921)
30 3faw_A Reticulocyte binding pr 93.6 0.041 1.4E-06 59.2 3.9 64 290-365 146-223 (877)
31 2ya0_A Putative alkaline amylo 93.3 0.08 2.7E-06 54.9 5.4 65 289-365 25-105 (714)
32 1gcy_A Glucan 1,4-alpha-maltot 93.3 0.015 5.1E-07 57.7 0.0 70 287-367 430-517 (527)
33 3m07_A Putative alpha amylase; 92.9 0.15 5.1E-06 52.4 6.6 61 289-366 43-106 (618)
34 2wan_A Pullulanase; hydrolase, 90.4 0.3 1E-05 52.6 5.9 54 296-358 161-221 (921)
35 1ea9_C Cyclomaltodextrinase; h 89.4 0.083 2.8E-06 53.2 0.6 60 287-354 22-86 (583)
36 1ji1_A Alpha-amylase I; beta/a 89.4 0.16 5.6E-06 51.5 2.8 60 288-355 30-96 (637)
37 2ya1_A Putative alkaline amylo 86.6 0.99 3.4E-05 49.2 6.7 63 289-363 332-410 (1014)
38 4fch_A Outer membrane protein 79.0 1.2 4E-05 39.8 3.1 49 298-357 12-62 (221)
39 2c3v_A Alpha-amylase G-6; carb 74.1 6.2 0.00021 32.6 5.9 64 288-363 10-80 (102)
40 3tnu_B Keratin, type II cytosk 69.0 15 0.00051 30.6 7.2 63 220-282 34-96 (129)
41 3tnu_A Keratin, type I cytoske 63.3 15 0.00051 30.8 6.1 62 221-282 37-98 (131)
42 4fe9_A Outer membrane protein 57.3 8.7 0.0003 37.4 4.2 46 298-354 150-197 (470)
43 2eef_A Protein phosphatase 1, 53.2 18 0.00062 31.8 5.1 68 288-360 48-128 (156)
44 3qh9_A Liprin-beta-2; coiled-c 47.6 53 0.0018 26.6 6.6 40 222-261 26-65 (81)
45 4dny_A Metalloprotease STCE; m 47.2 46 0.0016 28.7 6.6 24 339-363 99-123 (126)
46 4fe9_A Outer membrane protein 46.7 15 0.00051 35.8 3.9 52 298-360 260-318 (470)
47 3swk_A Vimentin; cytoskeleton, 45.6 35 0.0012 27.0 5.3 45 223-267 1-45 (86)
48 3vkg_A Dynein heavy chain, cyt 43.9 24 0.00081 43.7 5.7 73 223-295 2015-2090(3245)
49 3ol1_A Vimentin; structural ge 42.8 69 0.0023 26.5 6.9 45 221-265 19-63 (119)
50 1yua_A Topoisomerase I; gene-r 38.1 27 0.00092 30.1 3.7 45 262-306 56-100 (122)
51 2b5u_A Colicin E3; high resolu 38.1 26 0.00088 36.6 4.2 69 209-284 297-365 (551)
52 1x8y_A Lamin A/C; structural p 36.9 69 0.0024 25.2 5.7 66 206-272 13-81 (86)
53 1mhx_A Immunoglobulin-binding 35.8 12 0.00041 28.9 1.1 14 353-366 48-61 (65)
54 2djm_A Glucoamylase A; beta sa 35.8 46 0.0016 27.5 4.7 62 289-356 22-91 (106)
55 1bxv_A Plastocyanin; copper pr 34.6 38 0.0013 24.8 3.7 15 289-303 28-43 (91)
56 4fem_A Outer membrane protein 32.9 26 0.0009 32.9 3.1 50 298-358 149-200 (358)
57 3fpp_A Macrolide-specific effl 32.5 96 0.0033 28.1 6.7 41 205-245 59-99 (341)
58 1igd_A Protein G; immunoglobul 31.6 16 0.00055 28.2 1.1 14 353-366 44-57 (61)
59 1zym_A Enzyme I; phosphotransf 30.5 78 0.0027 29.3 5.8 21 342-365 212-235 (258)
60 4aef_A Neopullulanase (alpha-a 30.3 63 0.0021 32.7 5.6 54 288-357 125-185 (645)
61 3fil_A Immunoglobulin G-bindin 30.2 12 0.0004 28.4 0.2 14 353-366 39-52 (56)
62 2jo8_A Serine/threonine-protei 27.4 62 0.0021 24.1 3.6 34 248-281 15-49 (51)
63 4emc_A Monopolin complex subun 27.2 1.4E+02 0.0048 27.4 6.7 35 223-257 28-62 (190)
64 4dzn_A Coiled-coil peptide CC- 27.2 1E+02 0.0034 21.0 4.3 27 223-256 3-29 (33)
65 3oja_B Anopheles plasmodium-re 27.0 86 0.0029 30.7 5.7 21 233-253 520-540 (597)
66 2aan_A Auracyanin A; cupredoxi 26.8 89 0.0031 25.2 5.0 18 288-305 43-64 (139)
67 3fpp_A Macrolide-specific effl 26.8 1.3E+02 0.0046 27.2 6.6 36 221-256 68-103 (341)
68 3hnw_A Uncharacterized protein 26.6 1.7E+02 0.0059 24.9 6.9 31 225-255 78-108 (138)
69 2v4h_A NF-kappa-B essential mo 25.8 1.9E+02 0.0065 24.5 6.8 50 221-270 23-73 (110)
70 2xv5_A Lamin-A/C; structural p 25.5 2.4E+02 0.0081 21.9 7.0 56 222-277 5-63 (74)
71 1gk4_A Vimentin; intermediate 25.2 1.9E+02 0.0066 22.4 6.4 52 221-272 25-79 (84)
72 2rpv_A Immunoglobulin G-bindin 25.0 24 0.00081 28.1 1.1 14 353-366 58-71 (75)
73 4dk0_A Putative MACA; alpha-ha 25.0 84 0.0029 28.8 5.0 11 274-284 142-152 (369)
74 1qhq_A Protein (auracyanin); e 24.4 85 0.0029 25.3 4.4 17 288-304 41-62 (140)
75 1nkp_B MAX protein, MYC proto- 24.3 66 0.0023 24.6 3.5 33 224-256 49-81 (83)
76 3oja_A Leucine-rich immune mol 24.3 1.7E+02 0.0057 28.2 7.1 54 228-281 420-476 (487)
77 3na7_A HP0958; flagellar bioge 23.6 1.9E+02 0.0066 26.1 7.0 24 237-260 126-149 (256)
78 2jnz_A PHL P 3 allergen; timot 23.4 1.1E+02 0.0037 25.5 4.8 57 288-360 28-90 (108)
79 3bwu_D FIMD, outer membrane us 23.3 56 0.0019 26.4 3.1 18 342-359 28-45 (125)
80 3nmd_A CGMP dependent protein 23.2 79 0.0027 25.0 3.8 34 213-248 33-66 (72)
81 1b3i_A PETE protein, protein ( 23.2 1E+02 0.0034 23.0 4.3 17 289-305 28-45 (97)
82 4b6x_A AVRRPS4, avirulence pro 22.7 84 0.0029 25.7 3.9 69 177-246 9-79 (90)
83 1pgx_A Protein G; immunoglobul 21.9 24 0.00084 28.5 0.6 15 353-367 52-66 (83)
84 2r9f_A Calpain-1 catalytic sub 21.4 55 0.0019 31.3 3.1 25 343-367 120-147 (339)
85 4gln_D D-RFX001; heterochiral 21.1 31 0.0011 26.2 1.0 17 350-366 35-52 (56)
86 1ew4_A CYAY protein; friedreic 20.8 63 0.0022 26.5 2.9 18 344-363 67-84 (106)
87 1idp_A Scytalone dehydratase; 20.8 62 0.0021 28.3 3.0 23 345-367 129-152 (172)
88 4abm_A Charged multivesicular 20.6 1.5E+02 0.0051 23.2 4.9 34 237-270 7-40 (79)
89 3ol1_A Vimentin; structural ge 20.1 2.6E+02 0.009 23.0 6.6 45 223-267 70-114 (119)
90 2jee_A YIIU; FTSZ, septum, coi 20.0 2.1E+02 0.0073 22.9 5.7 27 234-260 53-79 (81)
No 1
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.89 E-value=3.2e-23 Score=194.25 Aligned_cols=114 Identities=24% Similarity=0.366 Sum_probs=91.4
Q ss_pred HHHHHHhhhhhhhhhcccchhH------HHHHhhh-CC--CceEEEEEEec-CCceEEEEeeeCCCccccccCCCCCCCc
Q 017019 255 LQTKAVTEINKAEKLISDKDEE------LIAAEES-LS--GLEVVEIQYSG-DGEIVEVAGSFNGWHHRIKMDPLPSSSI 324 (379)
Q Consensus 255 L~tKae~eI~eAqklI~eK~~~------LdaAeea-Ls--gLkpVTF~W~g-~AkeVeVaGSFNnW~~~IpM~Kd~sss~ 324 (379)
|-.+.-..+.+|...+.++++. +..+... |. ..++|+|+|++ +|++|+|+|||+||+.+++|.++
T Consensus 128 Lm~~~g~s~~~A~~~v~~~Rp~~Pn~~~l~~~~~~~L~~~~k~~v~f~~~~~~~~~V~v~GsF~~W~~~~~l~k~----- 202 (294)
T 3nme_A 128 MFWVQGYKLMEAHKLLMSKRSCFPKLDAIRNATIDILTGLKRKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLG----- 202 (294)
T ss_dssp HHHTSCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECSSCSCEEEEETTTEEEEEEECEEC-----
T ss_pred HHHHhCCCHHHHHHHHHHhCCCCCChhhhhHHHHHhhhccccccceeeeccCCCCEEEEEEeccCCCCcccceEc-----
Confidence 3333344677888888777643 2222211 33 44899999999 59999999999999988999985
Q ss_pred cccccccCCCcEEEEEEeCCeEEEEEEEECCEeeeCCCCCee-cC-CCccceEEEeC
Q 017019 325 IEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESV-TK-GGICNNILRVI 379 (379)
Q Consensus 325 ~~~~~ske~GvWsltL~LPPGrYEYKFIVDGeW~~DPdnPtV-tD-gGnvNNVLeVe 379 (379)
..+|.|++++.||||+|+|||+|||+|++||++|.+ .+ .|+.||+|.|.
T Consensus 203 ------~~~g~~~~~~~L~~G~y~YkFiVDG~w~~d~~~~~~~~d~~G~~nn~~~v~ 253 (294)
T 3nme_A 203 ------KGTGFWILKRELPEGQFEYKYIIDGEWTHNEAEPFIGPNKDGHTNNYAKVV 253 (294)
T ss_dssp ------TTTCEEEEEEEECSEEEEEEEEETTEEECCTTSCEECSCTTSCCEEEEEEC
T ss_pred ------CCCCEEEEEEECCCceEEEEEEECCEEeeCCCCCeeeECCCCCEeEEEEEC
Confidence 248999999999999999999999999999999987 45 79999999984
No 2
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.88 E-value=7.8e-23 Score=165.27 Aligned_cols=82 Identities=34% Similarity=0.585 Sum_probs=73.6
Q ss_pred CCCceEEEEEEecCCceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCEeeeCCCC
Q 017019 284 LSGLEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQR 363 (379)
Q Consensus 284 LsgLkpVTF~W~g~AkeVeVaGSFNnW~~~IpM~Kd~sss~~~~~~ske~GvWsltL~LPPGrYEYKFIVDGeW~~DPdn 363 (379)
-.+.++|+|+|...|++|+|+|+||+|+ .++|.+ ..|.|++++.|+||.|+|||+|||+|++||..
T Consensus 7 ~~~~~~v~F~wap~a~~V~v~GdFn~W~-~~~m~~-------------~~g~w~~~v~l~~G~~~YKf~VdG~~~~DP~~ 72 (96)
T 1z0n_A 7 PAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTR-------------SQNNFVAILDLPEGEHQYKFFVDGQWTHDPSE 72 (96)
T ss_dssp ---CEEEEEEECSCCSCEEEEEGGGTTC-CEECEE-------------ETTEEEEEEEECSEEEEEEEEETTEEECCTTS
T ss_pred CCCceEEEEEECCCCcEEEEEEEeCCCc-cccCEE-------------CCCEEEEEEEccCCCEEEEEEECCeEEcCCCC
Confidence 4566899999998899999999999999 789986 25899999999999999999999999999999
Q ss_pred CeecC-CCccceEEEeC
Q 017019 364 ESVTK-GGICNNILRVI 379 (379)
Q Consensus 364 PtVtD-gGnvNNVLeVe 379 (379)
|++.+ .|+.||+|.|.
T Consensus 73 ~~~~d~~G~~Nnvi~V~ 89 (96)
T 1z0n_A 73 PIVTSQLGTVNNIIQVK 89 (96)
T ss_dssp CEEECTTSCEEEEEEEC
T ss_pred CeEECCCCCEeEEEEEc
Confidence 99887 69999999984
No 3
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=99.88 E-value=1e-22 Score=190.23 Aligned_cols=84 Identities=31% Similarity=0.438 Sum_probs=77.3
Q ss_pred CceEEEEEEecCCceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCEeeeCCCCCe
Q 017019 286 GLEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRES 365 (379)
Q Consensus 286 gLkpVTF~W~g~AkeVeVaGSFNnW~~~IpM~Kd~sss~~~~~~ske~GvWsltL~LPPGrYEYKFIVDGeW~~DPdnPt 365 (379)
.+++|+|+|+++|++|+|+|+|++|++.++|.+.. .+.|.|++++.|+||+|+|||+|||+|++||++|+
T Consensus 2 ~~vpv~f~W~~~a~~V~V~GsF~~W~~~~~m~k~~----------~~~G~f~~tv~LppG~y~YKFiVDG~w~~Dp~~p~ 71 (252)
T 2qlv_B 2 LMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDS----------DNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPT 71 (252)
T ss_dssp CCEEEEEEECSCCSCEEEEEGGGTTSSCEECEECS----------SSTTCEEEEEEECSEEEEEEEEETTEEECCTTSCE
T ss_pred CcEEEEEEEeCCCcEEEEEEEeCCCcCcccceecc----------CCCCcEEEEEECCCCEEEEEEEECCEEEeCCCCCE
Confidence 57899999999999999999999999889998731 35799999999999999999999999999999999
Q ss_pred ecC-CCccceEEEeC
Q 017019 366 VTK-GGICNNILRVI 379 (379)
Q Consensus 366 VtD-gGnvNNVLeVe 379 (379)
+.+ .|+.||+|.|.
T Consensus 72 ~~d~~G~~nNvi~V~ 86 (252)
T 2qlv_B 72 ATDQMGNFVNYIEVR 86 (252)
T ss_dssp EBCSSCCCEEEEEEC
T ss_pred EecCCCcCcceeecc
Confidence 987 69999999984
No 4
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=99.52 E-value=1.2e-14 Score=148.89 Aligned_cols=79 Identities=19% Similarity=0.230 Sum_probs=67.7
Q ss_pred CCceEEEEEEec--CCceEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCEee--e
Q 017019 285 SGLEVVEIQYSG--DGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK--V 359 (379)
Q Consensus 285 sgLkpVTF~W~g--~AkeVeVaGSFNnW~~~-IpM~Kd~sss~~~~~~ske~GvWsltL~LPPGrYEYKFIVDGeW~--~ 359 (379)
.+..+|+|+++. +|++|+|+||||+|++. .+|.+ .+|.|++++.||||.|+|||+|||+|. +
T Consensus 15 ~~~~~v~f~~~~~~~~~~v~~~G~Fn~w~~~~~~~~~-------------~~~~~~~~~~L~~g~~~y~f~vdg~~~~~~ 81 (696)
T 4aee_A 15 KGRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRK-------------IEEQGIVYLKLWPGEYGYGFQIDNDFENVL 81 (696)
T ss_dssp EEEEEEEEEEECCTTCSCEEEEETTSCSSTTSCBCEE-------------ETTEEEEEEEECSEEEEEEEEETTCCSCCC
T ss_pred CCcEEEEEEEECCCCCcEEEEEEecCCCCCCCcceEe-------------cCCeEEEEEEcCCceEEEEEEECCEEeecC
Confidence 355789999988 59999999999999764 67765 489999999999999999999999999 8
Q ss_pred CCCCCeec---C-CCccceEE
Q 017019 360 DPQRESVT---K-GGICNNIL 376 (379)
Q Consensus 360 DPdnPtVt---D-gGnvNNVL 376 (379)
||++|... + .|..|++.
T Consensus 82 d~~~~~~~y~~~~~g~~n~~~ 102 (696)
T 4aee_A 82 DPDNEEKKCVHTSFFPEYKKC 102 (696)
T ss_dssp CTTCCCEEEEECSSCTTSEEE
T ss_pred CCCCCcccccccCCcccccee
Confidence 89988755 3 48889884
No 5
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=99.25 E-value=8.2e-12 Score=126.35 Aligned_cols=68 Identities=22% Similarity=0.510 Sum_probs=60.7
Q ss_pred ceEEEEEEecCCceEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCEeeeCCCCCe
Q 017019 287 LEVVEIQYSGDGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRES 365 (379)
Q Consensus 287 LkpVTF~W~g~AkeVeVaGSFNnW~~~-IpM~Kd~sss~~~~~~ske~GvWsltL~LPPGrYEYKFIVDGeW~~DPdnPt 365 (379)
...|.|.|+..|+.|+|.|+||+|.+. .+|++ .+|.|.+++.||||.|+|||+|||+|..||.+|.
T Consensus 16 ~~~~~~~~~~~~~~~yl~G~Fn~w~~~~~~m~~-------------~g~~~~~~v~L~~G~y~Y~f~vdg~~~~dp~n~~ 82 (645)
T 4aef_A 16 VAEVEFSLIREGSYAYLLGDFNAFNEGSFRMEQ-------------EGKNWKIKIALPEGVWHYAFSIDGKFVLDPDNPE 82 (645)
T ss_dssp EEEEEEEEECCSSCEEEEETTTTTCTTSSEEEE-------------CSSEEEEEEEECSEEEEEEEEETTEEECCTTCCC
T ss_pred EEEEEEecCCCCeEEEEEEcCCCCCCCcccceE-------------cCCEEEEEEEeCCceEEEEEEECCeEecCCCCCC
Confidence 467889999999999999999999874 56764 5789999999999999999999999999999987
Q ss_pred ec
Q 017019 366 VT 367 (379)
Q Consensus 366 Vt 367 (379)
..
T Consensus 83 ~~ 84 (645)
T 4aef_A 83 RR 84 (645)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 6
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=98.32 E-value=1.1e-06 Score=84.08 Aligned_cols=81 Identities=21% Similarity=0.213 Sum_probs=64.3
Q ss_pred CCceEEEEEEecC-C-------ceEEEEeeeCCCccc------cccCCCCCCCccccccccCCCcEEEEEEeCCeEE-EE
Q 017019 285 SGLEVVEIQYSGD-G-------EIVEVAGSFNGWHHR------IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTY-EI 349 (379)
Q Consensus 285 sgLkpVTF~W~g~-A-------keVeVaGSFNnW~~~------IpM~Kd~sss~~~~~~ske~GvWsltL~LPPGrY-EY 349 (379)
.+.+.|||.|.++ | ++|+|. +++|... .+|++. ..+|+|+.++.||+|.| .|
T Consensus 28 ~~~~~vtF~~~~p~a~~~~~~~~~V~~~--~~~~~d~~~~~~~~~m~r~-----------~~~~~W~~t~~l~~~~~~~Y 94 (403)
T 3c8d_A 28 DEMFEVTFWWRDPQGSEEYSTIKRVWVY--ITGVTDHHQNSQPQSMQRI-----------AGTDVWQWTTQLNANWRGSY 94 (403)
T ss_dssp SSEEEEEEEEECTTCSTTTCCCCEEEEE--ETTTC-------CCBCEEC-----------TTSSEEEEEEEEETTCEEEE
T ss_pred CCcEEEEEEeeCCCcccccCccceEEEE--CcCCCccccccCccccccC-----------CCCCeEEEEEEECCCcEEEE
Confidence 4567999999997 6 799998 3454332 357763 36999999999999999 99
Q ss_pred EEEEC------------------------CEeeeCCCCCeecC-C-CccceEEEe
Q 017019 350 KFIVD------------------------GQWKVDPQRESVTK-G-GICNNILRV 378 (379)
Q Consensus 350 KFIVD------------------------GeW~~DPdnPtVtD-g-GnvNNVLeV 378 (379)
.|+|| |..+.||.+|.... . |+..|+++|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~ 149 (403)
T 3c8d_A 95 CFIPTERDDIFSAPSPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEM 149 (403)
T ss_dssp EEEEESCCSTTCCC--CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEEC
T ss_pred EEEecCcccccccccchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccC
Confidence 99999 78899999998764 4 777788875
No 7
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=98.26 E-value=2.6e-06 Score=72.11 Aligned_cols=71 Identities=24% Similarity=0.573 Sum_probs=54.7
Q ss_pred CceEEEEEEecC---CceEEEEee---eCCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEE---
Q 017019 286 GLEVVEIQYSGD---GEIVEVAGS---FNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV--- 353 (379)
Q Consensus 286 gLkpVTF~W~g~---AkeVeVaGS---FNnW~~~--IpM~Kd~sss~~~~~~ske~GvWsltL~LPPG-rYEYKFIV--- 353 (379)
....|+|+.... ++.|+|+|+ +.+|++. ++|.... .+.....|++++.||+| .+||||++
T Consensus 7 ~~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~--------~~~~~~~W~~~v~lp~~~~~eYKyvi~~~ 78 (131)
T 2z0b_A 7 GPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPEN--------DTGESMLWKATIVLSRGVSVQYRYFKGYF 78 (131)
T ss_dssp CCEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECC--------TTCCSSEEEEEEEECTTCCEEEEEEEEEE
T ss_pred CeEEEEEEEeeecCCCCEEEEEeCCCcCCCCCccccccccccc--------cCCCCCeEEEEEEcCCCCcEEEEEEEEee
Confidence 457899999874 899999999 8999974 6787531 11257899999999998 59999999
Q ss_pred -----C-C-------EeeeCCCCC
Q 017019 354 -----D-G-------QWKVDPQRE 364 (379)
Q Consensus 354 -----D-G-------eW~~DPdnP 364 (379)
+ | .|...+.+.
T Consensus 79 ~~~~~~~g~~~v~~~~WE~g~~NR 102 (131)
T 2z0b_A 79 LEPKTIGGPCQVIVHKWETHLQPR 102 (131)
T ss_dssp ECCCC----CEEEEEEECCSSCCE
T ss_pred cCccccCCccccceeeECCCCCCc
Confidence 5 3 788887443
No 8
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=97.99 E-value=4e-06 Score=67.87 Aligned_cols=75 Identities=27% Similarity=0.538 Sum_probs=56.6
Q ss_pred CceEEEEEEecC---CceEEEEeee---CCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEE-C-
Q 017019 286 GLEVVEIQYSGD---GEIVEVAGSF---NGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-D- 354 (379)
Q Consensus 286 gLkpVTF~W~g~---AkeVeVaGSF---NnW~~~--IpM~Kd~sss~~~~~~ske~GvWsltL~LPPG-rYEYKFIV-D- 354 (379)
+...|+|+.... |+.|+|+|+. .+|++. ++|.... .+.+++.|++++.||+| .+||||+| |
T Consensus 5 ~~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~--------~~~~~~~W~~~v~lp~~~~~eYKy~v~~~ 76 (108)
T 1ac0_A 5 TAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADK--------YTSSDPLWYVTVTLPAGESFEYKFIRIES 76 (108)
T ss_dssp CCCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSS--------SSSSCSSCEEEECCCSSSCEECCCEECCS
T ss_pred CeEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCccccccc--------cCCcCCeEEEEEEeCCCCeEEEEEEEEcC
Confidence 456788888764 8999999986 589964 6787630 01146899999999999 59999999 3
Q ss_pred -C--EeeeCCCCCeecC
Q 017019 355 -G--QWKVDPQRESVTK 368 (379)
Q Consensus 355 -G--eW~~DPdnPtVtD 368 (379)
| .|..+|++-....
T Consensus 77 ~g~~~WE~g~nR~~~~p 93 (108)
T 1ac0_A 77 DDSVEWESDPNREYTVP 93 (108)
T ss_dssp SSCCCCCCSSCCEECCC
T ss_pred CCCEEeccCCCEEEECC
Confidence 4 5888887766554
No 9
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=97.69 E-value=0.00011 Score=74.82 Aligned_cols=68 Identities=24% Similarity=0.365 Sum_probs=53.5
Q ss_pred ceEEEEEEecC-CceEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEE---CCEe--e
Q 017019 287 LEVVEIQYSGD-GEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV---DGQW--K 358 (379)
Q Consensus 287 LkpVTF~W~g~-AkeVeVaGSFNnW~~-~IpM~Kd~sss~~~~~~ske~GvWsltL~-LPPGrYEYKFIV---DGeW--~ 358 (379)
...|+|+..++ |++|.|.|+|++|.. .++|.+. ...|+|++++. +++|.+ |+|.| ||.+ .
T Consensus 24 ~~gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~~~-----------~~~GvW~~~v~~~~~g~~-Y~f~i~~~~g~~~~~ 91 (617)
T 1m7x_A 24 VTGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLR-----------KESGIWELFIPGAHNGQL-YKYEMIDANGNLRLK 91 (617)
T ss_dssp CEEEEEEEECSSCSCEEEEEGGGTSCTTTCBCCCC-----------TTTTEEEEEEETCCTTCE-EEEEEECTTSCEEEE
T ss_pred cCcEEEEEECCCCCEEEEEEEeCCCCCceeEeEEC-----------CCCCEEEEEEcCCCCCCE-EEEEEEcCCCcEEEe
Confidence 35799998887 999999999999975 4788863 25799999997 888974 99988 6775 6
Q ss_pred eCCCCCee
Q 017019 359 VDPQRESV 366 (379)
Q Consensus 359 ~DPdnPtV 366 (379)
.||-....
T Consensus 92 ~DPya~~~ 99 (617)
T 1m7x_A 92 SDPYAFEA 99 (617)
T ss_dssp CCTTCSSE
T ss_pred cCccceee
Confidence 77755443
No 10
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=97.52 E-value=0.00014 Score=76.51 Aligned_cols=69 Identities=26% Similarity=0.343 Sum_probs=53.8
Q ss_pred ceEEEEEEecC-CceEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEE---CCEe--e
Q 017019 287 LEVVEIQYSGD-GEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV---DGQW--K 358 (379)
Q Consensus 287 LkpVTF~W~g~-AkeVeVaGSFNnW~~~-IpM~Kd~sss~~~~~~ske~GvWsltL~-LPPGrYEYKFIV---DGeW--~ 358 (379)
..-|+|+..++ |+.|.|.|+||+|+.. .+|.+. ...|+|++.+. +.+|. .|||.| ||+| +
T Consensus 135 ~~g~~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~-----------~~~GvW~~~i~~~~~g~-~Y~y~i~~~~g~~~~~ 202 (722)
T 3k1d_A 135 VSGVSFAVWAPNAKGVSLIGEFNGWNGHEAPMRVL-----------GPSGVWELFWPDFPCDG-LYKFRVHGADGVVTDR 202 (722)
T ss_dssp EEEEEEEEECTTCSEEEEEEGGGTTCCCSCBCEEC-----------GGGCEEEEEEETCCTTC-EEEEEEECTTSCEEEE
T ss_pred CceEEEEEECCCCCEEEEEeecCCCCCCcccCEEc-----------CCCCEEEEEeCCCCCCC-EEEEEEEcCCCcEEEe
Confidence 45799999987 9999999999999864 678763 24699999997 88995 578887 5765 6
Q ss_pred eCCCCCeec
Q 017019 359 VDPQRESVT 367 (379)
Q Consensus 359 ~DPdnPtVt 367 (379)
.||-...+.
T Consensus 203 ~DPya~~~~ 211 (722)
T 3k1d_A 203 ADPFAFGTE 211 (722)
T ss_dssp CCTTCSSBC
T ss_pred ecccceeec
Confidence 777665443
No 11
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=97.42 E-value=0.00017 Score=75.99 Aligned_cols=63 Identities=21% Similarity=0.393 Sum_probs=49.3
Q ss_pred eEEEEEEecC-CceEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEE-------eCCeEEEEEEEEC---C
Q 017019 288 EVVEIQYSGD-GEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLW-------LYPGTYEIKFIVD---G 355 (379)
Q Consensus 288 kpVTF~W~g~-AkeVeVaGSFNnW~~~-IpM~Kd~sss~~~~~~ske~GvWsltL~-------LPPGrYEYKFIVD---G 355 (379)
..|+|+..++ |+.|+|.|+|++|... ++|.+. ..|+|++.+. +++|.+ |||.|+ |
T Consensus 65 ~gv~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~------------~~GvW~~~v~~~~g~~~i~~g~~-Y~y~i~~~~g 131 (755)
T 3aml_A 65 GATIYREWAPAAQEAQLIGEFNNWNGAKHKMEKD------------KFGIWSIKISHVNGKPAIPHNSK-VKFRFRHGGG 131 (755)
T ss_dssp TEEEEEEECTTCSEEEEEEGGGTTCCTTCBCEEC------------TTSEEEEEEECBTTBCSSCTTEE-EEEEEECTTC
T ss_pred CeEEEEEECCCCCEEEEEEecCCCCCceeeceeC------------CCCEEEEEEcccccccCCCCCCE-EEEEEECCCC
Confidence 3689988887 9999999999999754 778763 5799999998 788875 888886 4
Q ss_pred Ee--eeCCCC
Q 017019 356 QW--KVDPQR 363 (379)
Q Consensus 356 eW--~~DPdn 363 (379)
.| +.||-.
T Consensus 132 ~~~~~~dpya 141 (755)
T 3aml_A 132 AWVDRIPAWI 141 (755)
T ss_dssp CCEEECCTTC
T ss_pred cEEecCCcch
Confidence 55 346633
No 12
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=96.43 E-value=0.0023 Score=66.92 Aligned_cols=56 Identities=9% Similarity=0.094 Sum_probs=45.2
Q ss_pred EEEEEEecC-CceEEEEeeeCCCcc-----ccccCCCCCCCccccccccCCCcEEEEEE-eC------CeEEEEEEEECC
Q 017019 289 VVEIQYSGD-GEIVEVAGSFNGWHH-----RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LY------PGTYEIKFIVDG 355 (379)
Q Consensus 289 pVTF~W~g~-AkeVeVaGSFNnW~~-----~IpM~Kd~sss~~~~~~ske~GvWsltL~-LP------PGrYEYKFIVDG 355 (379)
.|+|+..++ |++|.|.+ |++|.. .++|.+. ..|+|++.+. +. +|.|.|+|.|+|
T Consensus 17 ~~~F~vwap~A~~V~l~l-~~~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~g 83 (750)
T 1bf2_A 17 NITFRVYSSQATRIVLYL-YSAGYGVQESATYTLSPA------------GSGVWAVTVPVSSIKAAGITGAVYYGYRAWG 83 (750)
T ss_dssp EEEEEEECSSCSEEEEEE-ESSSSSCCCSEEEECEEC------------STTEEEEEEEHHHHHHTTCCSCCEEEEEEEB
T ss_pred EEEEEEECCCCCEEEEEE-EccCCCCccceEEecccC------------CCCEEEEEECCcccccccCCCCEEEEEEEEe
Confidence 388988876 99999998 987653 4667652 5799999986 77 999999999998
Q ss_pred Ee
Q 017019 356 QW 357 (379)
Q Consensus 356 eW 357 (379)
.|
T Consensus 84 ~~ 85 (750)
T 1bf2_A 84 PN 85 (750)
T ss_dssp TT
T ss_pred ee
Confidence 54
No 13
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=96.32 E-value=0.004 Score=63.97 Aligned_cols=54 Identities=24% Similarity=0.349 Sum_probs=44.6
Q ss_pred EEEEEEecC-CceEEEEeeeCCCc--cccccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEECCE
Q 017019 289 VVEIQYSGD-GEIVEVAGSFNGWH--HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQ 356 (379)
Q Consensus 289 pVTF~W~g~-AkeVeVaGSFNnW~--~~IpM~Kd~sss~~~~~~ske~GvWsltL~-LPPGrYEYKFIVDGe 356 (379)
.|+|+..++ |++|.|.+ |+++. ..++|.+ ...|+|.+.+. +.+|.+ |+|.|+|.
T Consensus 20 g~~F~vwap~A~~V~l~~-f~~~~~~~~~~m~~------------~~~g~w~~~v~~~~~g~~-Y~y~v~~~ 77 (657)
T 2wsk_A 20 GVNFTLFSAHAERVELCV-FDANGQEHRYDLPG------------HSGDIWHGYLPDARPGLR-YGYRVHGP 77 (657)
T ss_dssp EEEEEEECSSCSEEEEEE-ECTTCCEEEEECCE------------EETTEEEEEEETCCTTCE-EEEEEECC
T ss_pred eEEEEEECCCCCEEEEEE-ECCCCCEEEEeCcC------------CCCCEEEEEECCCCCCCE-EEEEEeee
Confidence 689988876 99999999 98765 3578875 25799999985 889987 99999984
No 14
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=96.30 E-value=0.012 Score=60.34 Aligned_cols=71 Identities=21% Similarity=0.382 Sum_probs=54.1
Q ss_pred CceEEEEEEec-----CCceEEEEeeeC---CCcc--------cc-ccCCCCCCCccccccccCCCcEEEEEEeCCe-EE
Q 017019 286 GLEVVEIQYSG-----DGEIVEVAGSFN---GWHH--------RI-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TY 347 (379)
Q Consensus 286 gLkpVTF~W~g-----~AkeVeVaGSFN---nW~~--------~I-pM~Kd~sss~~~~~~ske~GvWsltL~LPPG-rY 347 (379)
....|+|+... .|+.|+|+|+-. +|++ .+ +|.. .....|++++.||+| .+
T Consensus 580 ~~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~------------~~~~~W~~~v~l~~~~~~ 647 (686)
T 1qho_A 580 TQTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLA------------PNYPDWFYVFSVPAGKTI 647 (686)
T ss_dssp SEEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBC------------TTTTSEEEEEEEETTCEE
T ss_pred CeEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhhhccccc------------CCCCcEEEEEEeCCCCeE
Confidence 35678888875 378999999984 8997 23 4443 357899999999998 59
Q ss_pred EEEEEE---CC--EeeeCCCCCeecC
Q 017019 348 EIKFIV---DG--QWKVDPQRESVTK 368 (379)
Q Consensus 348 EYKFIV---DG--eW~~DPdnPtVtD 368 (379)
||||+| +| .|...|+.-....
T Consensus 648 eyKy~~~~~~~~~~We~~~nr~~~~~ 673 (686)
T 1qho_A 648 QFKFFIKRADGTIQWENGSNHVATTP 673 (686)
T ss_dssp EEEEEEECTTSCEEECCSSCEEEECC
T ss_pred EEEEEEEcCCCCEEeCCCCCeeEECC
Confidence 999998 34 5888887766554
No 15
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=96.27 E-value=0.0022 Score=64.46 Aligned_cols=61 Identities=13% Similarity=0.073 Sum_probs=51.0
Q ss_pred EEEEEEecC-CceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEECCE-eeeCCCCCe
Q 017019 289 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQ-WKVDPQRES 365 (379)
Q Consensus 289 pVTF~W~g~-AkeVeVaGSFNnW~~~IpM~Kd~sss~~~~~~ske~GvWsltL~-LPPGrYEYKFIVDGe-W~~DPdnPt 365 (379)
.|+|+..++ |+.|.|.|.|+ ..++|.+. ..|+|++.+. +.+|. .|+|.|||. ...||-...
T Consensus 10 ~~~f~vwap~a~~v~l~~~~~---~~~~m~~~------------~~g~w~~~~~~~~~g~-~Y~~~~~~~~~~~DP~~~~ 73 (558)
T 3vgf_A 10 EVIFTLWAPYQKSVKLKVLEK---GLYEMERD------------EKGYFTITLNNVKVRD-RYKYVLDDASEIPDPASRY 73 (558)
T ss_dssp EEEEEEECTTCSCCEEEETTT---EEEECEEC------------TTCEEEEEESSCCTTC-EEEEECTTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEEecC---ceeecccC------------CCCEEEEEECCCCCCC-EEEEEEeCCccccCcchhh
Confidence 688998887 99999999987 56889874 5799999996 88995 699999997 888886543
No 16
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=96.21 E-value=0.018 Score=58.98 Aligned_cols=74 Identities=22% Similarity=0.316 Sum_probs=55.9
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEE-
Q 017019 286 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 353 (379)
Q Consensus 286 gLkpVTF~W~g----~AkeVeVaGSFN---nW~~~--I-pM~Kd~sss~~~~~~ske~GvWsltL~LPPG-rYEYKFIV- 353 (379)
+..+|+|+... .|+.|+|+|+-. +|++. + +|.... ......|++++.||+| .+||||++
T Consensus 578 ~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~~---------~~~~~~W~~~v~lp~~~~~eyK~v~~ 648 (680)
T 1cyg_A 578 DQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQV---------VYSYPTWYIDVSVPEGKTIEFKFIKK 648 (680)
T ss_dssp CEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSS---------SSCTTCEEEEEEEESSCEEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccc---------CCCCCcEEEEEEeCCCCcEEEEEEEE
Confidence 45789999876 289999999875 99975 5 565410 1257899999999988 79999997
Q ss_pred --CC--EeeeCCCCCeecC
Q 017019 354 --DG--QWKVDPQRESVTK 368 (379)
Q Consensus 354 --DG--eW~~DPdnPtVtD 368 (379)
+| .|...|++-....
T Consensus 649 ~~~~~~~WE~g~Nr~~~~~ 667 (680)
T 1cyg_A 649 DSQGNVTWESGSNHVYTTP 667 (680)
T ss_dssp CTTSCEEECCSSCEEEECC
T ss_pred eCCCCeEeCCCCCeeEECC
Confidence 34 4888877766554
No 17
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=96.05 E-value=0.0068 Score=63.12 Aligned_cols=55 Identities=20% Similarity=0.347 Sum_probs=44.2
Q ss_pred EEEEEEecC-CceEEEEeeeCCCc-----cccccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEECCEe
Q 017019 289 VVEIQYSGD-GEIVEVAGSFNGWH-----HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQW 357 (379)
Q Consensus 289 pVTF~W~g~-AkeVeVaGSFNnW~-----~~IpM~Kd~sss~~~~~~ske~GvWsltL~-LPPGrYEYKFIVDGeW 357 (379)
.|+|+..++ |+.|.|.+ |+.+. ..++|.+ ...|+|.+.+. +.+|.+ |+|.|+|.|
T Consensus 30 g~~F~vwap~A~~V~l~l-f~~~~~~~~~~~~~m~~------------~~~gvw~~~v~~~~~g~~-Y~y~v~g~~ 91 (718)
T 2vr5_A 30 GVNFSLFSENAEKVELLL-YSLTNQKYPKEIIEVKN------------KTGDIWHVFVPGLRPGQL-YAYRVYGPY 91 (718)
T ss_dssp EEEEEEECSSCSEEEEEE-CCSSCCSSCSEEEEECE------------ESSSEEEEEEETCCTTCE-EEEEEECCE
T ss_pred eEEEEEECCCCCEEEEEE-EcCCCCCCcceEEeCcc------------CCCCEEEEEeCCCCCCCE-EEEEEeeec
Confidence 588988876 99999999 87554 2477875 25799999986 889987 999999854
No 18
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=96.03 E-value=0.0046 Score=63.04 Aligned_cols=61 Identities=20% Similarity=0.203 Sum_probs=49.2
Q ss_pred EEEEEEecC-CceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCEeeeCCCCCee
Q 017019 289 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESV 366 (379)
Q Consensus 289 pVTF~W~g~-AkeVeVaGSFNnW~~~IpM~Kd~sss~~~~~~ske~GvWsltL~LPPGrYEYKFIVDGeW~~DPdnPtV 366 (379)
.|+|+..++ |+.|.|.|. ...++|.+. ..|+|++.+.+.+|.+ |+|.|||..+.||-....
T Consensus 35 ~~~f~vwap~a~~v~l~~~----~~~~~m~~~------------~~g~w~~~~~~~~g~~-Y~~~v~g~~~~DPya~~~ 96 (602)
T 2bhu_A 35 GTRFRLWTSTARTVAVRVN----GTEHVMTSL------------GGGIYELELPVGPGAR-YLFVLDGVPTPDPYARFL 96 (602)
T ss_dssp CEEEEEECSSCSSEEEEET----TEEEECEEE------------ETTEEEEEESCCTTCE-EEEEETTEEECCTTCSCC
T ss_pred eEEEEEECCCCCEEEEEEc----CCEEeCeeC------------CCcEEEEEEECCCCcE-EEEEECCeEecCCCcccc
Confidence 688987776 999999994 245788863 5799999999889986 999999977788866543
No 19
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=95.94 E-value=0.018 Score=59.37 Aligned_cols=73 Identities=27% Similarity=0.519 Sum_probs=54.1
Q ss_pred eEEEEEEecC---CceEEEEeeeC---CCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEE---CC
Q 017019 288 EVVEIQYSGD---GEIVEVAGSFN---GWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV---DG 355 (379)
Q Consensus 288 kpVTF~W~g~---AkeVeVaGSFN---nW~~~--IpM~Kd~sss~~~~~~ske~GvWsltL~LPPG-rYEYKFIV---DG 355 (379)
..|+|+.... |+.|+|+|+-. +|++. ++|.... .+..+..|++++.||+| .+||||+| +|
T Consensus 497 v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~--------~t~~~~~W~~~v~lp~~~~~eYKyvv~~~~g 568 (599)
T 2vn4_A 497 VAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVN--------YADNHPLWIGTVNLEAGDVVEYKYINVGQDG 568 (599)
T ss_dssp EEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTT--------CBTTBCEEEEEEEEETTCEEEEEEEEECTTC
T ss_pred EEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeeccccc--------CCCCCCcEEEEEEcCCCCcEEEEEEEECCCC
Confidence 5688888764 89999999884 89964 6787530 11124799999999998 59999998 33
Q ss_pred --EeeeCCCCCeecC
Q 017019 356 --QWKVDPQRESVTK 368 (379)
Q Consensus 356 --eW~~DPdnPtVtD 368 (379)
.|...|+.-....
T Consensus 569 ~~~WE~g~NR~~~~p 583 (599)
T 2vn4_A 569 SVTWESDPNHTYTVP 583 (599)
T ss_dssp CEEECCSSCEEEECC
T ss_pred ceEeCCCCCEEEecC
Confidence 4877777665544
No 20
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=95.68 E-value=0.023 Score=58.34 Aligned_cols=74 Identities=22% Similarity=0.323 Sum_probs=54.5
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEE-
Q 017019 286 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 353 (379)
Q Consensus 286 gLkpVTF~W~g----~AkeVeVaGSFN---nW~~~--I-pM~Kd~sss~~~~~~ske~GvWsltL~LPPG-rYEYKFIV- 353 (379)
..+.|+|+... .|+.|+|+|+-. +|++. + +|.... +.....|++++.||+| .+||||++
T Consensus 582 ~~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~~---------~~~~~~W~~~v~lp~~~~~eyK~~~~ 652 (683)
T 3bmv_A 582 NQICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQV---------VYQYPTWYYDVSVPAGTTIQFKFIKK 652 (683)
T ss_dssp SEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSS---------SSCTTSEEEEEEEETTCEEEEEEEEE
T ss_pred CeEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccC---------CCCCCcEEEEEEeCCCCcEEEEEEEE
Confidence 35789999876 289999999885 99974 5 666421 1257899999999998 79999997
Q ss_pred CC---EeeeCCCCCeecC
Q 017019 354 DG---QWKVDPQRESVTK 368 (379)
Q Consensus 354 DG---eW~~DPdnPtVtD 368 (379)
|+ .|...|++-.+..
T Consensus 653 ~~~~~~WE~g~Nr~~~~~ 670 (683)
T 3bmv_A 653 NGNTITWEGGSNHTYTVP 670 (683)
T ss_dssp SSSCCEECCSSCEEEECC
T ss_pred cCCceEecCCCCeeEECC
Confidence 32 4777766555444
No 21
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=95.51 E-value=0.029 Score=57.63 Aligned_cols=74 Identities=20% Similarity=0.280 Sum_probs=53.9
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEE-
Q 017019 286 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 353 (379)
Q Consensus 286 gLkpVTF~W~g----~AkeVeVaGSFN---nW~~~--I-pM~Kd~sss~~~~~~ske~GvWsltL~LPPG-rYEYKFIV- 353 (379)
....|+|+... .|+.|+|+|+-. +|++. + +|.... +.....|++++.||.| .+||||++
T Consensus 585 ~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~~---------~~~~~~W~~~v~lp~~~~~eyK~~~~ 655 (686)
T 1d3c_A 585 DQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQV---------VYQYPNWYYDVSVPAGKTIEFKFLKK 655 (686)
T ss_dssp SEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCSS---------SSCTTCEEEEEEEETTCEEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccc---------CCCCCeEEEEEEeCCCCcEEEEEEEE
Confidence 35789999876 289999999875 89975 5 565411 1257899999999988 79999997
Q ss_pred C-C--EeeeCCCCCeecC
Q 017019 354 D-G--QWKVDPQRESVTK 368 (379)
Q Consensus 354 D-G--eW~~DPdnPtVtD 368 (379)
| | .|...|++-....
T Consensus 656 ~~~~~~WE~g~Nr~~~~~ 673 (686)
T 1d3c_A 656 QGSTVTWEGGSNHTFTAP 673 (686)
T ss_dssp ETTEEEECCSSCEEEECC
T ss_pred cCCceEecCCCCeEEECC
Confidence 2 2 4776666555444
No 22
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=95.34 E-value=0.019 Score=58.93 Aligned_cols=54 Identities=15% Similarity=0.056 Sum_probs=40.1
Q ss_pred EEEEEEecC-CceEEEEeeeCCCccccc--cCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEECC
Q 017019 289 VVEIQYSGD-GEIVEVAGSFNGWHHRIK--MDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDG 355 (379)
Q Consensus 289 pVTF~W~g~-AkeVeVaGSFNnW~~~Ip--M~Kd~sss~~~~~~ske~GvWsltL~-LPPGrYEYKFIVDG 355 (379)
.|+|+..++ |++|.|.+-+++|..... |.+ ...|+|++.+. +.+|.| |+|.|+|
T Consensus 137 g~~F~vwAp~A~~V~l~l~~~~~~~~~~~~~~~------------~~~g~W~~~~~~~~~g~~-Y~y~v~~ 194 (884)
T 4aio_A 137 SVSLHLWAPTAQGVSVCFFDGPAGPALETVQLK------------ESNGVWSVTGPREWENRY-YLYEVDV 194 (884)
T ss_dssp EEEEEEECTTCSEEEEEEESTTTSCEEEEEECE------------EETTEEEEEEEGGGTTCE-EEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEEeCCCCCeeeeeeec------------CCCCEEEEEECCCCCCCE-EEEEEeC
Confidence 589998887 999999995555655422 322 36899999986 778864 8888875
No 23
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=95.25 E-value=0.039 Score=45.92 Aligned_cols=65 Identities=17% Similarity=0.246 Sum_probs=50.5
Q ss_pred eEEEEEEecCCceEEEEeeeC--CCccc--cccCCCCCCCccccccccCCCcE-EEEEEeCCe-EEEEEEEECCE--eee
Q 017019 288 EVVEIQYSGDGEIVEVAGSFN--GWHHR--IKMDPLPSSSIIEPIRSRKSRLW-STVLWLYPG-TYEIKFIVDGQ--WKV 359 (379)
Q Consensus 288 kpVTF~W~g~AkeVeVaGSFN--nW~~~--IpM~Kd~sss~~~~~~ske~GvW-sltL~LPPG-rYEYKFIVDGe--W~~ 359 (379)
..|++.|..+.++|+|-..+. +|... ++|.+. .-..| ..++.||.| .++|+|. ||. |-.
T Consensus 5 ~~vtiyY~~g~~~vylHyg~~~g~Wt~~~~v~M~~~------------~~~gw~~~TI~l~~g~~~~~~F~-dG~~~WDN 71 (104)
T 2laa_A 5 NKVTIYYKKGFNSPYIHYRPAGGSWTAAPGVKMQDA------------EISGYAKITVDIGSASQLEAAFN-DGNNNWDS 71 (104)
T ss_dssp CEEEEEEECSSSSCEEEEEETTSCCCSSSCEECEEE------------TTTTEEEEEEECTTCSCEEEEEE-CSSSCEES
T ss_pred CEEEEEEcCCCCcEEEEEcCCCCCCCcCCccccccc------------cCCCeEEEEEECCCCCEEEEEEe-CCCCcCcC
Confidence 578899998899999999995 89874 678652 21247 599999976 8999995 874 988
Q ss_pred CCCCCe
Q 017019 360 DPQRES 365 (379)
Q Consensus 360 DPdnPt 365 (379)
++..-.
T Consensus 72 n~g~Ny 77 (104)
T 2laa_A 72 NNTKNY 77 (104)
T ss_dssp TTTSCE
T ss_pred CCCccE
Confidence 776644
No 24
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=95.23 E-value=0.039 Score=56.06 Aligned_cols=72 Identities=19% Similarity=0.279 Sum_probs=52.4
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc---cccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEE-
Q 017019 286 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR---IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 353 (379)
Q Consensus 286 gLkpVTF~W~g----~AkeVeVaGSFN---nW~~~---IpM~Kd~sss~~~~~~ske~GvWsltL~LPPG-rYEYKFIV- 353 (379)
....|+|+... .|++|+|+|+-. +|++. ++|... ..++.|++++.||+| .+||||++
T Consensus 418 ~~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~-----------~~p~~W~~~v~lp~~~~~eYKyv~~ 486 (516)
T 1vem_A 418 TPVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYD-----------SHSNDWRGNVVLPAERNIEFKAFIK 486 (516)
T ss_dssp CEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEE-----------TTTTEEEEEEEEETTCCEEEEEEEE
T ss_pred CccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccC-----------CCCCEEEEEEEECCCCcEEEEEEEE
Confidence 35789999865 289999999884 89875 345431 235699999999998 59999997
Q ss_pred C--C---EeeeCCCCCeecC
Q 017019 354 D--G---QWKVDPQRESVTK 368 (379)
Q Consensus 354 D--G---eW~~DPdnPtVtD 368 (379)
| | .|...++.-....
T Consensus 487 ~~~g~v~~WE~g~NR~~~~p 506 (516)
T 1vem_A 487 SKDGTVKSWQTIQQSWNPVP 506 (516)
T ss_dssp CTTSCEEEECSSCEEESSCC
T ss_pred eCCCCeeEEeCCCCEEEecC
Confidence 3 3 4777766554443
No 25
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=95.19 E-value=0.034 Score=57.67 Aligned_cols=65 Identities=17% Similarity=0.219 Sum_probs=48.5
Q ss_pred EEEEEEecC-CceEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEE--CCEe--eeCC
Q 017019 289 VVEIQYSGD-GEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV--DGQW--KVDP 361 (379)
Q Consensus 289 pVTF~W~g~-AkeVeVaGSFNnW~~-~IpM~Kd~sss~~~~~~ske~GvWsltL~-LPPGrYEYKFIV--DGeW--~~DP 361 (379)
.|+|+..++ |+.|.|.|.|++|.. .++|.+. ..|+|++.+. +.+|. .|+|.| +|.| ..||
T Consensus 114 ~~~f~vwap~a~~V~l~~~~~~~~~~~~~m~~~------------~~g~w~~~v~~~~~g~-~Y~f~v~~~g~~~~~~DP 180 (718)
T 2e8y_A 114 HTVFKVWAPAATSAAVKLSHPNKSGRTFQMTRL------------EKGVYAVTVTGDLHGY-EYLFCICNNSEWMETVDQ 180 (718)
T ss_dssp EEEEEEECTTCSEEEEEEECTTSCCEEEECEEC------------GGGEEEEEEESCCTTC-EEEEEEEETTEEEEECCT
T ss_pred cEEEEEECCCCCEEEEEEEcCCCcceEEeCccC------------CCCEEEEEECCCCCCC-eEEEEEEeCCeEEEecCC
Confidence 688988877 999999999998864 4789863 4799999987 56773 455655 5874 5687
Q ss_pred CCCee
Q 017019 362 QRESV 366 (379)
Q Consensus 362 dnPtV 366 (379)
-...+
T Consensus 181 ya~~~ 185 (718)
T 2e8y_A 181 YAKAV 185 (718)
T ss_dssp TCSSB
T ss_pred ccccc
Confidence 66543
No 26
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=94.96 E-value=0.029 Score=56.39 Aligned_cols=60 Identities=10% Similarity=-0.009 Sum_probs=42.8
Q ss_pred ceEEEEEEec-CCceEEE-EeeeCCCcc----ccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEEC
Q 017019 287 LEVVEIQYSG-DGEIVEV-AGSFNGWHH----RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 354 (379)
Q Consensus 287 LkpVTF~W~g-~AkeVeV-aGSFNnW~~----~IpM~Kd~sss~~~~~~ske~GvWsltL~LPPGrYEYKFIVD 354 (379)
...++|+-.+ .+++|.| .|+|++|+. .++|.+.. .++..|+|++++......+.|||.|.
T Consensus 22 ~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~--------~~~~~~~w~~~i~~~~~~~~Y~f~i~ 87 (585)
T 1wzl_A 22 QLRVRLRAKKGDVVRCEVLYADRYASPEEELAHALAGKAG--------SDERFDYFEALLECSTKRVKYVFLLT 87 (585)
T ss_dssp EEEEEEEEETTTCSEEEEEEECTTCCTTSCCEEEECEEEE--------ECSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEEEEECCCCccEEEEEECCCcCCCCCceEEEEEEEee--------cCCCEEEEEEEEECCCCeEEEEEEEE
Confidence 3455554334 5999999 899999975 47888631 01124679999998777789999884
No 27
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=94.88 E-value=0.022 Score=62.63 Aligned_cols=66 Identities=18% Similarity=0.099 Sum_probs=50.0
Q ss_pred EEEEEEecC-CceEEEEe-eeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEEC------CE--
Q 017019 289 VVEIQYSGD-GEIVEVAG-SFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVD------GQ-- 356 (379)
Q Consensus 289 pVTF~W~g~-AkeVeVaG-SFNnW~~-~IpM~Kd~sss~~~~~~ske~GvWsltL~-LPPGrYEYKFIVD------Ge-- 356 (379)
.|+|+..++ |+.|.|.+ +|++|.. .++|.+. ...|+|++.+. +.+|.| |+|.|+ |.
T Consensus 305 gv~F~vwAP~A~~V~L~l~d~~~~~~~~~~m~~~-----------~~~GvW~~~v~~~~~G~~-Y~y~v~~~~p~~g~~~ 372 (1083)
T 2fhf_A 305 GVTFRVWAPTAQQVELVIYSADKKVIASHPMTRD-----------SASGAWSWQGGSDLKGAF-YRYAMTVYHPQSRKVE 372 (1083)
T ss_dssp EEEEEEECTTCSEEEEEEECTTCCEEEEEECEEC-----------TTTCEEEEEECGGGTTCE-EEEEEEEEETTTTEEE
T ss_pred eEEEEEECCCCCEEEEEEEcCCCCccceEECeEC-----------CCCCEEEEEECCCCCCCE-EEEEEEeecCCCCccc
Confidence 689998887 99999999 8899975 4778753 25799999985 888965 777775 43
Q ss_pred --eeeCCCCCee
Q 017019 357 --WKVDPQRESV 366 (379)
Q Consensus 357 --W~~DPdnPtV 366 (379)
...||-...+
T Consensus 373 ~~~~~DPYa~~~ 384 (1083)
T 2fhf_A 373 QYEVTDPYAHSL 384 (1083)
T ss_dssp EEEECCTTCSCB
T ss_pred cceecCCcccee
Confidence 4777765443
No 28
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=93.94 E-value=0.042 Score=55.24 Aligned_cols=61 Identities=13% Similarity=0.146 Sum_probs=43.5
Q ss_pred CceEEEEEEec-CCceEEE-EeeeCCCcc------ccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEEC
Q 017019 286 GLEVVEIQYSG-DGEIVEV-AGSFNGWHH------RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 354 (379)
Q Consensus 286 gLkpVTF~W~g-~AkeVeV-aGSFNnW~~------~IpM~Kd~sss~~~~~~ske~GvWsltL~LPPGrYEYKFIVD 354 (379)
...+++|+-.. .+++|.| .|+|++|+. .++|.+.. .++..|.|++++......+.|+|.|.
T Consensus 21 ~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~--------~~~~~~~w~~~v~~~~~~~~Y~f~i~ 89 (588)
T 1j0h_A 21 ETLHLRLRTKKDDIDRVELLHGDPYDWQNGAWQFQMMPMRKTG--------SDELFDYWFAEVKPPYRRLRYGFVLY 89 (588)
T ss_dssp SCEEEEEEEETTTCSEEEEEEECTTCEETTEECCEEEECEEEE--------ECSSEEEEEEEECCTTSCEEEEEEEE
T ss_pred CEEEEEEEECCCCccEEEEEECCCCCccccccceEEEEeEEee--------cCCCeEEEEEEEECCCcEEEEEEEEE
Confidence 44566776444 5999999 799999964 57888631 01124679999987777788888884
No 29
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=93.77 E-value=0.075 Score=57.15 Aligned_cols=62 Identities=16% Similarity=0.240 Sum_probs=46.4
Q ss_pred EEEEEEecC-CceEEEEeeeCCCc----cccccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEE--CCE--ee
Q 017019 289 VVEIQYSGD-GEIVEVAGSFNGWH----HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV--DGQ--WK 358 (379)
Q Consensus 289 pVTF~W~g~-AkeVeVaGSFNnW~----~~IpM~Kd~sss~~~~~~ske~GvWsltL~-LPPGrYEYKFIV--DGe--W~ 358 (379)
.|+|+..++ |+.|.|.+ |++|. ..++|.+. ..|+|++.+. +.+|.+ |+|.| +|. +.
T Consensus 326 gv~F~vwaP~A~~V~l~l-f~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~g~~-Y~y~v~~~g~~~~~ 391 (921)
T 2wan_A 326 ATSFRVWAPTASNVQLLL-YNSEKGSITKQLEMQKS------------DNGTWKLQVSGNLENWY-YLYQVTVNGTTQTA 391 (921)
T ss_dssp EEEEEEECTTCSEEEEEE-ESSSSSCCSEEEECEEC------------GGGEEEEEEESCCTTCE-EEEEEECSSCEEEE
T ss_pred eEEEEEECCCCCEEEEEE-EeCCCCCcCeEEeCeeC------------CCCEEEEEEccCCCCCE-EEEEEEeCCeEEEe
Confidence 689998887 99999997 99994 35788763 4699999986 667753 66665 665 45
Q ss_pred eCCCCC
Q 017019 359 VDPQRE 364 (379)
Q Consensus 359 ~DPdnP 364 (379)
.||-..
T Consensus 392 ~DPya~ 397 (921)
T 2wan_A 392 VDPYAR 397 (921)
T ss_dssp CCTTCS
T ss_pred cCCcce
Confidence 677544
No 30
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=93.56 E-value=0.041 Score=59.24 Aligned_cols=64 Identities=17% Similarity=0.190 Sum_probs=48.5
Q ss_pred EEEEEecC-CceEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEeCCeE-----EEEEEEEC--CE-
Q 017019 290 VEIQYSGD-GEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGT-----YEIKFIVD--GQ- 356 (379)
Q Consensus 290 VTF~W~g~-AkeVeVaG-SFNnW~~---~IpM~Kd~sss~~~~~~ske~GvWsltL~LPPGr-----YEYKFIVD--Ge- 356 (379)
|.|+..++ |+.|+|.+ ++++|.. +++|.+. ..|+|++.+.+.||. +.|+|.|+ |.
T Consensus 146 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~G~~~~~g~~Y~yrv~~~~~~ 213 (877)
T 3faw_A 146 VEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKN------------NKGVWQTILDTKLGIKNYTGYYYLYEIKRGKDK 213 (877)
T ss_dssp EEEEEECTTCSEEEEEEEETTEEEEEEEEEECEEC------------TTSEEEEEECGGGTCSCCTTCEEEEEEEETTEE
T ss_pred EEEEEECCCCCEEEEEEEeCCCCccceeeeccccC------------CCCEEEEEECCCCCCccCCCeEEEEEEeeCCce
Confidence 89998887 99999998 6777853 5788763 689999999776762 67888886 33
Q ss_pred -eeeCCCCCe
Q 017019 357 -WKVDPQRES 365 (379)
Q Consensus 357 -W~~DPdnPt 365 (379)
...||-...
T Consensus 214 ~~~~DPYA~~ 223 (877)
T 3faw_A 214 VKILDPYAKS 223 (877)
T ss_dssp EEECCTTCSC
T ss_pred eEecCcccee
Confidence 567886643
No 31
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=93.32 E-value=0.08 Score=54.86 Aligned_cols=65 Identities=18% Similarity=0.292 Sum_probs=47.4
Q ss_pred EEEEEEecC-CceEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEe--CCe-----EEEEEEEEC--
Q 017019 289 VVEIQYSGD-GEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWL--YPG-----TYEIKFIVD-- 354 (379)
Q Consensus 289 pVTF~W~g~-AkeVeVaG-SFNnW~~---~IpM~Kd~sss~~~~~~ske~GvWsltL~L--PPG-----rYEYKFIVD-- 354 (379)
.|.|+..++ |+.|.|.+ +|++|.. .++|.+. ..|+|++.+.- .+| -+.|+|.|+
T Consensus 25 gv~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~g~~~~~g~~Y~y~v~~~ 92 (714)
T 2ya0_A 25 QVDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG------------ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQ 92 (714)
T ss_dssp EEEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC------------GGGEEEEEECTTCSSSCSCCTTCEEEEEEEET
T ss_pred EEEEEEECCCCCEEEEEEEeCCCCCccceEEeCccC------------CCCEEEEEECCccCCCccccCCcEEEEEEEeC
Confidence 388988776 99999999 7888864 5788763 57999998863 134 166888886
Q ss_pred CE--eeeCCCCCe
Q 017019 355 GQ--WKVDPQRES 365 (379)
Q Consensus 355 Ge--W~~DPdnPt 365 (379)
|. -..||-...
T Consensus 93 ~~~~~~~DPya~~ 105 (714)
T 2ya0_A 93 GKTVLALDPYAKS 105 (714)
T ss_dssp TEEEEECCTTCSE
T ss_pred CceEEecCCceee
Confidence 64 467886543
No 32
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=93.30 E-value=0.015 Score=57.72 Aligned_cols=70 Identities=20% Similarity=0.411 Sum_probs=0.0
Q ss_pred ceEEEEEE-ec---CCceEEEEeeeC---CCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEE-C-
Q 017019 287 LEVVEIQY-SG---DGEIVEVAGSFN---GWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-D- 354 (379)
Q Consensus 287 LkpVTF~W-~g---~AkeVeVaGSFN---nW~~~--IpM~Kd~sss~~~~~~ske~GvWsltL~LPPG-rYEYKFIV-D- 354 (379)
..+|+|+. .. .|+.|+|+|+-. +|++. ++|... .....|++++.||+| .+||||+| |
T Consensus 430 ~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~-----------~~~~~W~~~v~lp~~~~~eyKy~~~~~ 498 (527)
T 1gcy_A 430 LVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDT-----------SGYPTWKGSIALPAGQNEEWKCLIRNE 498 (527)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccC-----------CCCCeEEEEEEeCCCCcEEEEEEEEeC
Confidence 35678876 33 389999999885 89873 677631 246789999999999 59999996 3
Q ss_pred -C-----EeeeCCCCCeec
Q 017019 355 -G-----QWKVDPQRESVT 367 (379)
Q Consensus 355 -G-----eW~~DPdnPtVt 367 (379)
| .|...|+.-...
T Consensus 499 ~~~~~~~~We~g~nr~~~~ 517 (527)
T 1gcy_A 499 ANATQVRQWQGGANNSLTP 517 (527)
T ss_dssp -------------------
T ss_pred CCCcceeEecCCCCeeEEC
Confidence 3 377766665443
No 33
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=92.89 E-value=0.15 Score=52.37 Aligned_cols=61 Identities=20% Similarity=0.238 Sum_probs=47.2
Q ss_pred EEEEEEecC-CceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEEC-CEeeeCCCCCe
Q 017019 289 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVD-GQWKVDPQRES 365 (379)
Q Consensus 289 pVTF~W~g~-AkeVeVaGSFNnW~~~IpM~Kd~sss~~~~~~ske~GvWsltL~-LPPGrYEYKFIVD-GeW~~DPdnPt 365 (379)
.|+|+..++ |+.|.|.+ +|. .++|.+. ..|.|.+.+. +.+|. .|+|.|+ |..+.||-...
T Consensus 43 ~~~F~vwap~a~~v~l~~---~~~-~~~m~~~------------~~g~~~~~~~~~~~g~-~Y~y~v~~~~~~~DP~a~~ 105 (618)
T 3m07_A 43 VVRFRLWATGQQKVMLRL---AGK-DQEMQAN------------GDGWFTLDVAGVTPGT-EYNFVLSDGMVVPDPASRA 105 (618)
T ss_dssp EEEEEEECTTCSCEEEEE---TTE-EEECEEC------------STTEEEEEEETCCTTC-EEEEEETTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEE---CCC-cccCeec------------CCEEEEEEeCCCCCCC-EEEEEEeCCeEecccccee
Confidence 588998887 99999998 354 4788863 5789999884 88886 5888995 66888887654
Q ss_pred e
Q 017019 366 V 366 (379)
Q Consensus 366 V 366 (379)
.
T Consensus 106 ~ 106 (618)
T 3m07_A 106 Q 106 (618)
T ss_dssp B
T ss_pred e
Confidence 3
No 34
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=90.44 E-value=0.3 Score=52.58 Aligned_cols=54 Identities=20% Similarity=0.392 Sum_probs=37.8
Q ss_pred cCCceEEEEeee-------CCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCEee
Q 017019 296 GDGEIVEVAGSF-------NGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK 358 (379)
Q Consensus 296 g~AkeVeVaGSF-------NnW~~~IpM~Kd~sss~~~~~~ske~GvWsltL~LPPGrYEYKFIVDGeW~ 358 (379)
.....+.+.|+| .+|.+.-.... .....+|+|+.+-.||+|.||||+.++|.|.
T Consensus 161 ~~~~~~~~~g~~~~~~g~~~~w~p~~~~~~---------~~~~~~~~y~~~~~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 161 ANPVTAVLVGDLQQALGAANNWSPDDDHTL---------LKKINPNLYQLSGTLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp CCCCCEEEEETTSGGGTCSSSSCTTCGGGB---------CEEEETTEEEEEEEECSEEEEEEEEETTSSS
T ss_pred ccccccccccchhhhccccccCCCCCCcce---------eeccCCcceeeeeccCCcceeEEEeecCccc
Confidence 345678888877 36776421110 1112478999999999999999999998773
No 35
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=89.41 E-value=0.083 Score=53.19 Aligned_cols=60 Identities=18% Similarity=0.214 Sum_probs=41.6
Q ss_pred ceEEEEEEec-CCceEEE-EeeeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEEC
Q 017019 287 LEVVEIQYSG-DGEIVEV-AGSFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 354 (379)
Q Consensus 287 LkpVTF~W~g-~AkeVeV-aGSFNnW~~---~IpM~Kd~sss~~~~~~ske~GvWsltL~LPPGrYEYKFIVD 354 (379)
...++|+-.+ .+++|.| .|+|++|+. .++|.+.. .++..|+|++.+......+.|||.|.
T Consensus 22 ~~~~~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~M~~~~--------~~~~~~~w~~~i~~~~~~~~Y~f~i~ 86 (583)
T 1ea9_C 22 TVHLRIRTKKDDMTAVYALAGDKYMWDHTMEYVPMTKLA--------TDELFDYWECEVTPPYRRVKYGFLLQ 86 (583)
T ss_dssp CEECCCEECTTCCSBEEEEEECSSSCTTTCEEEEECEEE--------ECSSCEEECCEECCTTSCEEECBCCE
T ss_pred EEEEEEEECCCCccEEEEEECCCcCCCCcEEEEEEEEEe--------ccCCeEEEEEEEECCCceEEEEEEEE
Confidence 3455565444 5999999 899999975 47888631 01124679999987766778888773
No 36
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=89.40 E-value=0.16 Score=51.51 Aligned_cols=60 Identities=10% Similarity=0.108 Sum_probs=41.2
Q ss_pred eEEEEEEe----cC-CceEEEEeeeCCCccccccCC--CCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECC
Q 017019 288 EVVEIQYS----GD-GEIVEVAGSFNGWHHRIKMDP--LPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDG 355 (379)
Q Consensus 288 kpVTF~W~----g~-AkeVeVaGSFNnW~~~IpM~K--d~sss~~~~~~ske~GvWsltL~LPPGrYEYKFIVDG 355 (379)
..|+|+.. ++ +++|.|.|.|++-...++|.+ .. .++..|+|++.+........|+|.|+|
T Consensus 30 ~~v~f~v~~~~~ap~a~~V~l~~~~~~~~~~~~m~~~~~~--------~~~~~~~w~~~i~~~~~g~~Y~f~i~~ 96 (637)
T 1ji1_A 30 QSVTLKLRTFKGDITSANIKYWDTADNAFHWVPMVWDSND--------PTGTFDYWKGTIPASPSIKYYRFQIND 96 (637)
T ss_dssp CCEEEEEEEETTCCSEEEEEEEETTTTEEEEEECEEEEEC--------TTSSEEEEEEEECCCSSCEEEEEEEEE
T ss_pred CEEEEEEEEecCcCCeeEEEEEEecCCCEEEEEeEEeecc--------ccCCeeEEEEEEECCCceEEEEEEEEE
Confidence 35777765 54 899999999875223478875 21 012458999999865555679999964
No 37
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=86.57 E-value=0.99 Score=49.23 Aligned_cols=63 Identities=17% Similarity=0.285 Sum_probs=45.7
Q ss_pred EEEEEEecC-CceEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEeC--Ce-----EEEEEEEEC--
Q 017019 289 VVEIQYSGD-GEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLY--PG-----TYEIKFIVD-- 354 (379)
Q Consensus 289 pVTF~W~g~-AkeVeVaG-SFNnW~~---~IpM~Kd~sss~~~~~~ske~GvWsltL~LP--PG-----rYEYKFIVD-- 354 (379)
.|.|+..++ |+.|.|.+ +|++|.. +++|.+. ..|+|++.+.-. +| -+.|+|.|+
T Consensus 332 gv~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~g~~~~~G~~Y~y~i~~~ 399 (1014)
T 2ya1_A 332 QVDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG------------ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQ 399 (1014)
T ss_dssp EEEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC------------GGGEEEEEECTTCSSCCSCCTTCEEEEEEEET
T ss_pred EEEEEEECCCCCEEEEEEEECCCCCccceEEecccC------------CCCEEEEEEcccccCCccccCCcEEEEEEEeC
Confidence 388998887 99999999 7888864 5788762 579999988631 23 256777775
Q ss_pred CE--eeeCCCC
Q 017019 355 GQ--WKVDPQR 363 (379)
Q Consensus 355 Ge--W~~DPdn 363 (379)
|. ...||-.
T Consensus 400 ~~~~~~~DPYa 410 (1014)
T 2ya1_A 400 GKTVLALDPYA 410 (1014)
T ss_dssp TEEEEECCTTC
T ss_pred CeEEEecCccc
Confidence 54 4678854
No 38
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=79.05 E-value=1.2 Score=39.77 Aligned_cols=49 Identities=12% Similarity=0.106 Sum_probs=38.3
Q ss_pred CceEEEEeeeCCCcc--ccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCEe
Q 017019 298 GEIVEVAGSFNGWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQW 357 (379)
Q Consensus 298 AkeVeVaGSFNnW~~--~IpM~Kd~sss~~~~~~ske~GvWsltL~LPPGrYEYKFIVDGeW 357 (379)
.++++|+|++++|.. ..+|.+.. ...|.|...+.|+-|. +|||.-+..|
T Consensus 12 p~~lY~vG~~~gW~~~~~~~m~~~~----------~~~g~y~~~~yl~ag~-~fKf~~~~~~ 62 (221)
T 4fch_A 12 PKTMFIVGSMLDTDWKVWKPMAGVY----------GMDGQFYSMIYFDANS-EFKFGTKENE 62 (221)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECT----------TCTTEEEEEEEECTTE-EEEEESSTTC
T ss_pred cceEEEEecCCCCCCCccceeeecc----------CCCceEEEEEEEcCCC-eEEEeeccCc
Confidence 678999999998863 35676542 2579999999998764 8999987655
No 39
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=74.13 E-value=6.2 Score=32.61 Aligned_cols=64 Identities=17% Similarity=0.276 Sum_probs=45.7
Q ss_pred eEEEEEEecCCceEEEEeeeC--CCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEECC--EeeeC
Q 017019 288 EVVEIQYSGDGEIVEVAGSFN--GWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVDG--QWKVD 360 (379)
Q Consensus 288 kpVTF~W~g~AkeVeVaGSFN--nW~~~--IpM~Kd~sss~~~~~~ske~GvWsltL~LPPG-rYEYKFIVDG--eW~~D 360 (379)
..+++.|..+...|+|==.+. +|... ++|.+. .-.|.|..++.|+.+ +++|.| -|| .|-.+
T Consensus 10 ~~vTvyY~sg~~~~ylHy~~~~g~Wt~vpgv~M~~~-----------~~~Gw~~~TI~~~~~~~l~~~F-~dG~~~WDNN 77 (102)
T 2c3v_A 10 TDITIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKS-----------EXEGXVKVTIEAEEGSQLRAAF-NNGSGQWDNN 77 (102)
T ss_dssp CSEEEEEECCCSSCEEEEEETTCCBCCTTCEECEEC-----------SSTTEEEEEECCCTTCEEEEEE-ECSSSCEECG
T ss_pred CEEEEEEcCCCCcEEEEEeCCCCCcccCCCcCcccc-----------ccCCceEEEEecCCCceEEEEE-eCCCcccccC
Confidence 357777777788888876674 48864 778752 137888999999965 899999 665 58655
Q ss_pred CCC
Q 017019 361 PQR 363 (379)
Q Consensus 361 Pdn 363 (379)
...
T Consensus 78 ~g~ 80 (102)
T 2c3v_A 78 QGR 80 (102)
T ss_dssp GGT
T ss_pred CCc
Confidence 433
No 40
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=68.95 E-value=15 Score=30.58 Aligned_cols=63 Identities=17% Similarity=0.294 Sum_probs=51.4
Q ss_pred cHHHHHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcccchhHHHHHhh
Q 017019 220 NQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEE 282 (379)
Q Consensus 220 n~~e~~~Lk~mlhqkElel~~~K~ele~~k~~LsvL~tKae~eI~eAqklI~eK~~~LdaAee 282 (379)
...||..|++.+..-+.++..+|.+-.-.+..|+-++...+.++..++..|......|..++.
T Consensus 34 ~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~ 96 (129)
T 3tnu_B 34 TKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQ 96 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 456889999999888888888888888888888888888888888888888877766665554
No 41
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=63.25 E-value=15 Score=30.75 Aligned_cols=62 Identities=16% Similarity=0.214 Sum_probs=42.7
Q ss_pred HHHHHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcccchhHHHHHhh
Q 017019 221 QLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEE 282 (379)
Q Consensus 221 ~~e~~~Lk~mlhqkElel~~~K~ele~~k~~LsvL~tKae~eI~eAqklI~eK~~~LdaAee 282 (379)
..||..|++.+..-+.++..+|.+-.-.+..|+-++...+.++..++..|......|..++.
T Consensus 37 k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~ 98 (131)
T 3tnu_A 37 KSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLRC 98 (131)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777777777777777777777777777777777777777777777776666655543
No 42
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=57.25 E-value=8.7 Score=37.39 Aligned_cols=46 Identities=15% Similarity=0.242 Sum_probs=34.6
Q ss_pred CceEEEEeeeCCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEEC
Q 017019 298 GEIVEVAGSFNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 354 (379)
Q Consensus 298 AkeVeVaGSFNnW~~~--IpM~Kd~sss~~~~~~ske~GvWsltL~LPPGrYEYKFIVD 354 (379)
....+|.|++++|... .+|.++. ...+.|.+...+..+. +|||+.-
T Consensus 150 ~~~~YlvG~~~gW~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~fK~~~~ 197 (470)
T 4fe9_A 150 PDGYYIVGDFTGWDGNSAQQMKKDA----------LDENLYILEAEIESTS-NFKIFPA 197 (470)
T ss_dssp TTCEEEEETTTCSSGGGCEECEECS----------SCTTEEEEEEEESSCC-EEEEEEG
T ss_pred cceeEEEcccCCCCcccCeeeeeec----------CCCceEEEEEEeccCc-eEEEeec
Confidence 4679999999999854 3454321 3678999999887766 7999964
No 43
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.18 E-value=18 Score=31.78 Aligned_cols=68 Identities=12% Similarity=0.255 Sum_probs=44.4
Q ss_pred eEEEEEEec--CCceEEEEeeeCCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCC-----e--EEEEEEEECCE
Q 017019 288 EVVEIQYSG--DGEIVEVAGSFNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYP-----G--TYEIKFIVDGQ 356 (379)
Q Consensus 288 kpVTF~W~g--~AkeVeVaGSFNnW~~~--IpM~Kd~sss~~~~~~ske~GvWsltL~LPP-----G--rYEYKFIVDGe 356 (379)
..-+++... -.+.|.|.=+|++|+.. +++....+ ..+......|..++.||+ + .+-++|.|+|.
T Consensus 48 l~GtV~V~NlafeK~V~VR~T~D~Wkt~~dv~a~y~~~-----~~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~ 122 (156)
T 2eef_A 48 IAGTVKVQNLAFEKTVKIRMTFDTWKSYTDFPCQYVKD-----TYAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQ 122 (156)
T ss_dssp EEEEEEECCSSSCCEEEEEEESSTTSSEEEEECEECCC-----SSSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTE
T ss_pred EEEEEEEeccCCCcEEEEEEeECCCcccEEEEEEEccc-----cCCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCC
Confidence 344455554 37999999999999976 34443211 011123558999998886 3 57789999996
Q ss_pred --eeeC
Q 017019 357 --WKVD 360 (379)
Q Consensus 357 --W~~D 360 (379)
|-.+
T Consensus 123 eyWDNN 128 (156)
T 2eef_A 123 TYWDSN 128 (156)
T ss_dssp EEEESG
T ss_pred EEecCC
Confidence 6444
No 44
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=47.59 E-value=53 Score=26.58 Aligned_cols=40 Identities=23% Similarity=0.307 Sum_probs=31.3
Q ss_pred HHHHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Q 017019 222 LEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVT 261 (379)
Q Consensus 222 ~e~~~Lk~mlhqkElel~~~K~ele~~k~~LsvL~tKae~ 261 (379)
-||++||.-+--.|-|-.+-...|--+|++|+.|+..-+.
T Consensus 26 qEi~~Lr~kv~elEnErlQyEkKLKsTK~El~~Lq~qLe~ 65 (81)
T 3qh9_A 26 QELRHLKIKVEELENERNQYEWKLKATKAEVAQLQEQVAL 65 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 4788898877777777777788888889888888766554
No 45
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=47.17 E-value=46 Score=28.73 Aligned_cols=24 Identities=33% Similarity=0.483 Sum_probs=20.0
Q ss_pred EEEeCCe-EEEEEEEECCEeeeCCCC
Q 017019 339 VLWLYPG-TYEIKFIVDGQWKVDPQR 363 (379)
Q Consensus 339 tL~LPPG-rYEYKFIVDGeW~~DPdn 363 (379)
++.|..| .|.|+| ++|+|+.+-+.
T Consensus 99 svtl~rG~t~~F~y-~~g~Wv~~gd~ 123 (126)
T 4dny_A 99 KVTLSVGNTLLFKY-VNGQWFRSGEL 123 (126)
T ss_dssp EEEECTTCEEEEEE-ETTEEEETTCC
T ss_pred EEEecCCCEEEEEE-cCCEEEEcccc
Confidence 4578889 799999 99999988654
No 46
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=46.71 E-value=15 Score=35.77 Aligned_cols=52 Identities=15% Similarity=0.353 Sum_probs=36.4
Q ss_pred CceEEEEeeeCCCccc-------cccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCEeeeC
Q 017019 298 GEIVEVAGSFNGWHHR-------IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVD 360 (379)
Q Consensus 298 AkeVeVaGSFNnW~~~-------IpM~Kd~sss~~~~~~ske~GvWsltL~LPPGrYEYKFIVDGeW~~D 360 (379)
...++++|++++|.-. .+|.+. ....|.|.....+.-| .+|||.-++.|-.+
T Consensus 260 ~~~lyivG~~~~wg~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~a~-gefKF~~~~~W~~~ 318 (470)
T 4fe9_A 260 PTELYMTGSAYNWGTPAGDPNAWKALVPV----------NGTKGTFWGIFYFAAN-DQVKFAPQANWGND 318 (470)
T ss_dssp CSCCEEEEGGGGGGCSTTCTTTCEECEEC----------TTCTTEEEEEEEECTT-CEEEEESSSSSSSC
T ss_pred cceEEEEeecccCCCCCCCcccccccccc----------cCcCceEEEEEEECCC-ceEEEEecCCcccc
Confidence 5689999999988632 122221 1357889888887654 58999999888554
No 47
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=45.63 E-value=35 Score=27.03 Aligned_cols=45 Identities=18% Similarity=0.195 Sum_probs=37.0
Q ss_pred HHHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 017019 223 EIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAE 267 (379)
Q Consensus 223 e~~~Lk~mlhqkElel~~~K~ele~~k~~LsvL~tKae~eI~eAq 267 (379)
||+.|++++..--.+..++-.|+.-++.++.-+..|-+.|+..-+
T Consensus 1 Ei~eLr~qi~~l~~e~~~l~~e~dn~~~~~edfk~KyE~E~~~R~ 45 (86)
T 3swk_A 1 EMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQRE 45 (86)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578889998888888888888888888888888888888776544
No 48
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=43.86 E-value=24 Score=43.67 Aligned_cols=73 Identities=11% Similarity=0.200 Sum_probs=43.1
Q ss_pred HHHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcccch---hHHHHHhhhCCCceEEEEEEe
Q 017019 223 EIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKD---EELIAAEESLSGLEVVEIQYS 295 (379)
Q Consensus 223 e~~~Lk~mlhqkElel~~~K~ele~~k~~LsvL~tKae~eI~eAqklI~eK~---~~LdaAeeaLsgLkpVTF~W~ 295 (379)
+++.+...|.+.+-+|..++.+|.+.+..|+.|+.+-+..+.|++++-.+-. .+|.+|++-++||..=..+|.
T Consensus 2015 ~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~Li~gL~~Ek~RW~ 2090 (3245)
T 3vkg_A 2015 EVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWE 2090 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccHH
Confidence 3444455555555555555566666666666666666666666666655442 677777766666644444554
No 49
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=42.84 E-value=69 Score=26.53 Aligned_cols=45 Identities=16% Similarity=0.164 Sum_probs=32.3
Q ss_pred HHHHHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 017019 221 QLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINK 265 (379)
Q Consensus 221 ~~e~~~Lk~mlhqkElel~~~K~ele~~k~~LsvL~tKae~eI~e 265 (379)
+.+|+.|++++-.-..+..++..|+..++.++.-++.|-+.++..
T Consensus 19 e~~I~~LR~qid~~~~e~a~l~leldn~~~~~edfk~KyE~E~~~ 63 (119)
T 3ol1_A 19 EEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQ 63 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 456778888877777777777777777777777777777666544
No 50
>1yua_A Topoisomerase I; gene-regulating protein, DNA binding protein; NMR {Escherichia coli} SCOP: g.41.3.3 g.41.3.3
Probab=38.14 E-value=27 Score=30.12 Aligned_cols=45 Identities=13% Similarity=0.095 Sum_probs=33.7
Q ss_pred hhhhhhhhcccchhHHHHHhhhCCCceEEEEEEecCCceEEEEee
Q 017019 262 EINKAEKLISDKDEELIAAEESLSGLEVVEIQYSGDGEIVEVAGS 306 (379)
Q Consensus 262 eI~eAqklI~eK~~~LdaAeeaLsgLkpVTF~W~g~AkeVeVaGS 306 (379)
||..-+..|.+|-..|-.|=..-..-.+..++|+...++-||+..
T Consensus 56 EL~~~~d~l~~K~~yL~~AP~~D~~Gn~tivrfSRKtKeqYV~sE 100 (122)
T 1yua_A 56 ELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYVSSE 100 (122)
T ss_dssp HHHHTTTTCCSTTHHHHHSCSSCTTCCCEEEEEETTTTEEEEEEC
T ss_pred HHHHHHHhcCHHHHHhhcCCccCCCCCeeeEEeeccchhheeeec
Confidence 344445667778777777777777778899999999888888744
No 51
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=38.10 E-value=26 Score=36.59 Aligned_cols=69 Identities=20% Similarity=0.301 Sum_probs=37.5
Q ss_pred cccchHHhhhccHHHHHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcccchhHHHHHhhhC
Q 017019 209 DFDSSEARRRENQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEESL 284 (379)
Q Consensus 209 ~kdl~ea~~~~n~~e~~~Lk~mlhqkElel~~~K~ele~~k~~LsvL~tKae~eI~eAqklI~eK~~~LdaAeeaL 284 (379)
.+..-|.+|++-+|-.+| =+..-|.++-+++.||+++.-.++-.+. .+.++++++.+-+.+|++|...|
T Consensus 297 kqrqeee~r~~qew~~~h---p~~~Aer~~e~a~ael~~a~k~~a~~~e----r~~~t~~~~~~~~~~~~~~n~~~ 365 (551)
T 2b5u_A 297 KQRQDEENRRQQEWDATH---PVEAAERNYERARAELNQANEDVARNQE----RQAKAVQVYNSRKSELDAANKTL 365 (551)
T ss_dssp HHHHHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcC---cHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHhhHHHHHhhhhHH
Confidence 344455555544443222 1233445566666666655444333332 45577788887777777776554
No 52
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=36.91 E-value=69 Score=25.18 Aligned_cols=66 Identities=18% Similarity=0.258 Sum_probs=37.7
Q ss_pred ccccccchHHhhhccHHHHHHHHHhhhHHHHHHhHHHHHHHHHHHHHH-HHHHHHHh--hhhhhhhhccc
Q 017019 206 EGADFDSSEARRRENQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALS-VLQTKAVT--EINKAEKLISD 272 (379)
Q Consensus 206 ~d~~kdl~ea~~~~n~~e~~~Lk~mlhqkElel~~~K~ele~~k~~Ls-vL~tKae~--eI~eAqklI~e 272 (379)
+.++..+.++-.+ ...++..+...+...|-++.++|.+++.--.+.+ .|-.|+.+ +|.-=++|+.+
T Consensus 13 ~~Le~~l~e~E~~-~~~~l~~~q~~i~~lE~el~~~r~e~~~ql~EYq~LlnvK~~Le~EIatYRkLLEG 81 (86)
T 1x8y_A 13 AAKEAKLRDLEDS-LARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEG 81 (86)
T ss_dssp TTHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcC
Confidence 3455555555554 4566777777777777777777777665544433 23334433 55555555543
No 53
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=35.81 E-value=12 Score=28.91 Aligned_cols=14 Identities=36% Similarity=0.847 Sum_probs=11.7
Q ss_pred ECCEeeeCCCCCee
Q 017019 353 VDGQWKVDPQRESV 366 (379)
Q Consensus 353 VDGeW~~DPdnPtV 366 (379)
|||+|.+||.-.+.
T Consensus 48 vdgeWsYD~ATkTF 61 (65)
T 1mhx_A 48 VDGEWTYDDAAKTF 61 (65)
T ss_dssp CCSEEEEETTTTEE
T ss_pred CccEEEecCceeEE
Confidence 69999999987764
No 54
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=35.75 E-value=46 Score=27.46 Aligned_cols=62 Identities=16% Similarity=0.173 Sum_probs=40.2
Q ss_pred EEEEEEecC--CceEEEEee--eCCCcc-cc--ccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEECCE
Q 017019 289 VVEIQYSGD--GEIVEVAGS--FNGWHH-RI--KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVDGQ 356 (379)
Q Consensus 289 pVTF~W~g~--AkeVeVaGS--FNnW~~-~I--pM~Kd~sss~~~~~~ske~GvWsltL~LPPG-rYEYKFIVDGe 356 (379)
.-+++...- .+.|.|.=+ |++|+. .. +....+ + .....-..|...+.||+. .+-.+|.|+|.
T Consensus 22 ~GtV~V~NlafeK~V~VR~T~~~D~W~t~~~dv~a~y~~--~----~~~~~~D~F~F~i~l~~~~eFcIrY~v~g~ 91 (106)
T 2djm_A 22 SGKIYVKNIAYSKKVTVVYADGSDNWNNNGNIIAASFSG--P----ISGSNYEYWTFSASVKGIKEFYIKYEVSGK 91 (106)
T ss_dssp EEEEEECCSSSCEEEEEEEEETTSSCSSCCCEEECEEEE--E----CTTSSCEEEEEEECCSSEEEEEEEEEESSC
T ss_pred EEEEEEeecCcCcEEEEEECCCcCCCccccEEEEEEEec--C----CCCCCeEEEEEEEECCCCeEEEEEEEECCc
Confidence 344444442 678888888 999998 42 222110 0 111345689999999876 67789999995
No 55
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=34.62 E-value=38 Score=24.83 Aligned_cols=15 Identities=20% Similarity=-0.062 Sum_probs=6.5
Q ss_pred EEEEEEecC-CceEEE
Q 017019 289 VVEIQYSGD-GEIVEV 303 (379)
Q Consensus 289 pVTF~W~g~-AkeVeV 303 (379)
+|+|.+..+ ...|.+
T Consensus 28 ~V~~~n~~~~~H~v~~ 43 (91)
T 1bxv_A 28 TVQWVNNKLAPHNVVV 43 (91)
T ss_dssp EEEEEECSSCCEEEEE
T ss_pred EEEEEECCCCCcEEEE
Confidence 455554432 344443
No 56
>4fem_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: ACX; 2.50A {Bacteroides thetaiotaomicron}
Probab=32.90 E-value=26 Score=32.90 Aligned_cols=50 Identities=12% Similarity=0.068 Sum_probs=36.8
Q ss_pred CceEEEEeeeCCCcc--ccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCEee
Q 017019 298 GEIVEVAGSFNGWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK 358 (379)
Q Consensus 298 AkeVeVaGSFNnW~~--~IpM~Kd~sss~~~~~~ske~GvWsltL~LPPGrYEYKFIVDGeW~ 358 (379)
...++|+|++.+|.. ..+|.+.. ...|.|.....|+.| .+|||.-...|-
T Consensus 149 p~~lYlvG~~~~~~w~~~~~l~~~~----------~~~g~y~~~~yl~~~-~~fKf~~~~~~~ 200 (358)
T 4fem_A 149 PKTMFIVGSMLDTDWKVWKPMAGVY----------GMDGQFYSMIYFDAN-SEFKFGTKENEY 200 (358)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECT----------TSTTEEEEEEEECTT-EEEEEESSTTCC
T ss_pred cceEEEeccccCCCCcccceeeecc----------CCCceEEEEEEecCC-ceEEeccccCCc
Confidence 578999999986643 34565432 357899999999876 679998876654
No 57
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=32.47 E-value=96 Score=28.13 Aligned_cols=41 Identities=20% Similarity=0.172 Sum_probs=16.7
Q ss_pred cccccccchHHhhhccHHHHHHHHHhhhHHHHHHhHHHHHH
Q 017019 205 VEGADFDSSEARRRENQLEIDHLKFMLHQKEMELSRLKEQI 245 (379)
Q Consensus 205 ~~d~~kdl~ea~~~~n~~e~~~Lk~mlhqkElel~~~K~el 245 (379)
|+.++..-.++....-+.+++.++..+.+-+-++..++.++
T Consensus 59 L~~ld~~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~ 99 (341)
T 3fpp_A 59 LGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTY 99 (341)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred EEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444433333333233444444444444444443333333
No 58
>1igd_A Protein G; immunoglobulin binding protein; 1.10A {Streptococcus SP} SCOP: d.15.7.1 PDB: 1igc_A 2igd_A 2igh_A 1qkz_A 2igg_A 1uwx_A 3mp9_A
Probab=31.62 E-value=16 Score=28.19 Aligned_cols=14 Identities=36% Similarity=0.781 Sum_probs=11.2
Q ss_pred ECCEeeeCCCCCee
Q 017019 353 VDGQWKVDPQRESV 366 (379)
Q Consensus 353 VDGeW~~DPdnPtV 366 (379)
|||+|.+||.-.+.
T Consensus 44 vdgew~yd~atktf 57 (61)
T 1igd_A 44 VDGVWTYDDATKTF 57 (61)
T ss_dssp CCCEEEEETTTTEE
T ss_pred CCceEeecCceeEE
Confidence 58999999977653
No 59
>1zym_A Enzyme I; phosphotransferase; 2.50A {Escherichia coli} SCOP: a.60.10.1 c.8.1.2 PDB: 1eza_A 1ezb_A 1ezc_A 1ezd_A 2eza_A 2ezb_A 2ezc_A 3ezb_A 3eze_A 3eza_A
Probab=30.49 E-value=78 Score=29.29 Aligned_cols=21 Identities=33% Similarity=0.537 Sum_probs=11.2
Q ss_pred eCCeEEEEEEEECC---EeeeCCCCCe
Q 017019 342 LYPGTYEIKFIVDG---QWKVDPQRES 365 (379)
Q Consensus 342 LPPGrYEYKFIVDG---eW~~DPdnPt 365 (379)
+..|.. -+||| .-..+|+..+
T Consensus 212 ~~~G~~---v~vDg~~G~v~~~p~~~~ 235 (258)
T 1zym_A 212 VKNDDY---LILDAVNNQVYVNPTNEV 235 (258)
T ss_dssp CCTTCE---EEECCSSCCEEESCCHHH
T ss_pred CCCCCE---EEEECCCCeEEECcCHHH
Confidence 555653 35675 3556665443
No 60
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=30.32 E-value=63 Score=32.71 Aligned_cols=54 Identities=11% Similarity=0.059 Sum_probs=35.6
Q ss_pred eEEEEEEecC-CceEEEEeeeCCCccccccCCCCCCCccccccccCCC---cEEEEEEeCCeEEEEEEEE---CCEe
Q 017019 288 EVVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSR---LWSTVLWLYPGTYEIKFIV---DGQW 357 (379)
Q Consensus 288 kpVTF~W~g~-AkeVeVaGSFNnW~~~IpM~Kd~sss~~~~~~ske~G---vWsltL~LPPGrYEYKFIV---DGeW 357 (379)
..+.|+-..+ ...|.+.|. .+++|.+. ...| .|.+.+..+..+..|+|.| ||.+
T Consensus 125 ~~~r~~~~~~~~~~~~~~~~-----~~~~m~~~-----------~~~~~~d~w~~~v~~~~~~~~Y~f~i~~~~g~~ 185 (645)
T 4aef_A 125 VHVLLRTQKGVIKGATFLGE-----KHVPMRKK-----------ASDELFDYFEVIVEGGDKRLNYSFEVLTMEGAK 185 (645)
T ss_dssp EEEEEEEETTTEEEEEEESS-----SEEECEEE-----------EECSSEEEEEEEEECSCSCEEEEEEEEETTCCE
T ss_pred EEEEEEcccCCcceEEEeCC-----CEEEEEEE-----------ecCCCeEEEEEEEECCCCceEEEEEEEeCCCcE
Confidence 3444444433 677877753 46899874 2344 4888888887788899987 5553
No 61
>3fil_A Immunoglobulin G-binding protein G; dimerization, beta sheet, alpha helix, improved hydrophobic packing of core residues, protein binding; HET: FME; 0.88A {Streptococcus SP} SCOP: d.15.7.1 PDB: 2qmt_A 2jsv_X 2ju6_X 2k0p_A 2kq4_X 2kwd_A 2lgi_A 2gi9_A 1gb1_A 1pga_A 1pgb_A 2gb1_A 3gb1_A 2klk_A 2rmm_A 2onq_A 2on8_A 2j52_A 2j53_A 3v3x_A* ...
Probab=30.16 E-value=12 Score=28.40 Aligned_cols=14 Identities=36% Similarity=0.857 Sum_probs=10.8
Q ss_pred ECCEeeeCCCCCee
Q 017019 353 VDGQWKVDPQRESV 366 (379)
Q Consensus 353 VDGeW~~DPdnPtV 366 (379)
|||+|.+||.-.+.
T Consensus 39 vdgeW~YD~ATkTF 52 (56)
T 3fil_A 39 VDGEWTYDDATKTF 52 (56)
T ss_dssp CCCEEEEEGGGTEE
T ss_pred CccEEEecCceeEE
Confidence 68999999876553
No 62
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=27.36 E-value=62 Score=24.14 Aligned_cols=34 Identities=24% Similarity=0.128 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhcccch-hHHHHHh
Q 017019 248 EKLALSVLQTKAVTEINKAEKLISDKD-EELIAAE 281 (379)
Q Consensus 248 ~k~~LsvL~tKae~eI~eAqklI~eK~-~~LdaAe 281 (379)
....++.|..-|+.+|-+-++.-..|+ |-+++.+
T Consensus 15 L~~rl~~Ld~~Me~Ei~elr~RY~~KRqPIldAi~ 49 (51)
T 2jo8_A 15 LQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIE 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHccHHHHHHHHHHHHHHHHhHhhHHHHHh
Confidence 334467888899999999988888886 7777665
No 63
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=27.20 E-value=1.4e+02 Score=27.42 Aligned_cols=35 Identities=29% Similarity=0.277 Sum_probs=29.4
Q ss_pred HHHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHHH
Q 017019 223 EIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQT 257 (379)
Q Consensus 223 e~~~Lk~mlhqkElel~~~K~ele~~k~~LsvL~t 257 (379)
|...|..+|..|+.|+..+++||+..|......+.
T Consensus 28 En~~L~~ql~~k~~ei~~L~~ql~sl~~~~~~~~~ 62 (190)
T 4emc_A 28 ENFVLSEKLDTKATEIKQLQKQIDSLNAQVKELKT 62 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 44889999999999999999999998888854443
No 64
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=27.17 E-value=1e+02 Score=20.96 Aligned_cols=27 Identities=37% Similarity=0.539 Sum_probs=16.9
Q ss_pred HHHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHH
Q 017019 223 EIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQ 256 (379)
Q Consensus 223 e~~~Lk~mlhqkElel~~~K~ele~~k~~LsvL~ 256 (379)
||+.||. |+.-+|.||+..|.++++|.
T Consensus 3 eiaalkq-------eiaalkkeiaalkfeiaalk 29 (33)
T 4dzn_A 3 EIAALKQ-------EIAALKKEIAALKFEIAALK 29 (33)
T ss_dssp HHHHHHH-------HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 5555553 34456777777777777664
No 65
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=27.04 E-value=86 Score=30.71 Aligned_cols=21 Identities=10% Similarity=0.020 Sum_probs=8.3
Q ss_pred HHHHHHhHHHHHHHHHHHHHH
Q 017019 233 QKEMELSRLKEQIEKEKLALS 253 (379)
Q Consensus 233 qkElel~~~K~ele~~k~~Ls 253 (379)
..|.++.+++.++.+.+.++.
T Consensus 520 ~~~~~~~~~~~~~~~~~~~~~ 540 (597)
T 3oja_B 520 FKLRETQARRTEADAKQKETE 540 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhhhhhhcchh
Confidence 333344444444433333333
No 66
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=26.81 E-value=89 Score=25.19 Aligned_cols=18 Identities=11% Similarity=0.195 Sum_probs=11.9
Q ss_pred eEEEEEEecC----CceEEEEe
Q 017019 288 EVVEIQYSGD----GEIVEVAG 305 (379)
Q Consensus 288 kpVTF~W~g~----AkeVeVaG 305 (379)
.+|+|+|... ...+.+.+
T Consensus 43 ~~V~~~~~N~~~~~~H~~~i~~ 64 (139)
T 2aan_A 43 QTVTIRFKNNSAVQQHNWILVK 64 (139)
T ss_dssp CEEEEEEECCCSSCCBCCEEES
T ss_pred CEEEEEEEeCCCCCCeeEEEec
Confidence 5788888764 46666665
No 67
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=26.79 E-value=1.3e+02 Score=27.15 Aligned_cols=36 Identities=11% Similarity=0.174 Sum_probs=15.7
Q ss_pred HHHHHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHH
Q 017019 221 QLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQ 256 (379)
Q Consensus 221 ~~e~~~Lk~mlhqkElel~~~K~ele~~k~~LsvL~ 256 (379)
+.+++.++..|.+-+.++.+++.+++..+..+.-.+
T Consensus 68 ~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~ 103 (341)
T 3fpp_A 68 ENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQ 103 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444444444443333
No 68
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=26.59 E-value=1.7e+02 Score=24.92 Aligned_cols=31 Identities=19% Similarity=0.313 Sum_probs=15.5
Q ss_pred HHHHHhhhHHHHHHhHHHHHHHHHHHHHHHH
Q 017019 225 DHLKFMLHQKEMELSRLKEQIEKEKLALSVL 255 (379)
Q Consensus 225 ~~Lk~mlhqkElel~~~K~ele~~k~~LsvL 255 (379)
+.|...+..++-|+-.+|.+|...+..+..+
T Consensus 78 ~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~ 108 (138)
T 3hnw_A 78 DSLSLDIENKDKEIYDLKHELIAAQIKAESS 108 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555555554444444333
No 69
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=25.77 E-value=1.9e+02 Score=24.53 Aligned_cols=50 Identities=26% Similarity=0.237 Sum_probs=26.3
Q ss_pred HHHHHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHh-hhhhhhhhc
Q 017019 221 QLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVT-EINKAEKLI 270 (379)
Q Consensus 221 ~~e~~~Lk~mlhqkElel~~~K~ele~~k~~LsvL~tKae~-eI~eAqklI 270 (379)
..||+.|+..|-..|-.|..--.++.+.|..++.++...++ .+-+||-.|
T Consensus 23 ~~ei~~L~~~L~~AEeaL~~Kq~~idelk~ei~q~~~~lE~I~vLkaQv~I 73 (110)
T 2v4h_A 23 SMQLEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADI 73 (110)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667777666666655555555555555555444443333 333444444
No 70
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=25.54 E-value=2.4e+02 Score=21.92 Aligned_cols=56 Identities=25% Similarity=0.396 Sum_probs=34.6
Q ss_pred HHHHHHHHhhhHHHHHHhHHHHHHHHHHHHHH-HHHHHHH--hhhhhhhhhcccchhHH
Q 017019 222 LEIDHLKFMLHQKEMELSRLKEQIEKEKLALS-VLQTKAV--TEINKAEKLISDKDEEL 277 (379)
Q Consensus 222 ~e~~~Lk~mlhqkElel~~~K~ele~~k~~Ls-vL~tKae--~eI~eAqklI~eK~~~L 277 (379)
.|...+..++...|-++.++|.+++.--.+.+ .|-.|+. .||.-=++|+.+...++
T Consensus 5 ~e~~~~~~~i~~lE~eL~~~r~e~~~ql~EYq~LlniKl~Le~EIatYRkLLEGEe~Rl 63 (74)
T 2xv5_A 5 RERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 63 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 45667778888888888888888776654444 3344444 37777777777665444
No 71
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=25.20 E-value=1.9e+02 Score=22.39 Aligned_cols=52 Identities=19% Similarity=0.287 Sum_probs=24.1
Q ss_pred HHHHHHHHHhhhHHHHHHhHHHHHHHHHHHHHH-HHHHHHHh--hhhhhhhhccc
Q 017019 221 QLEIDHLKFMLHQKEMELSRLKEQIEKEKLALS-VLQTKAVT--EINKAEKLISD 272 (379)
Q Consensus 221 ~~e~~~Lk~mlhqkElel~~~K~ele~~k~~Ls-vL~tKae~--eI~eAqklI~e 272 (379)
+.++..+...+..-|-++.++|.+++.--.+.+ .|-.|+.+ +|.-=++|+.+
T Consensus 25 ~~~~~~~q~~i~~lE~eL~~~r~e~~~q~~EYq~LlnvK~~Ld~EIatYRkLLEG 79 (84)
T 1gk4_A 25 AVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEG 79 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcC
Confidence 444455555555555555555555544433332 22233332 44444455444
No 72
>2rpv_A Immunoglobulin G-binding protein G; lanthanide binding peptide, LBT, paramagnetic effect, olivia, cell WALL, IGG-binding protein; NMR {Streptococcus SP}
Probab=25.02 E-value=24 Score=28.09 Aligned_cols=14 Identities=36% Similarity=0.857 Sum_probs=10.8
Q ss_pred ECCEeeeCCCCCee
Q 017019 353 VDGQWKVDPQRESV 366 (379)
Q Consensus 353 VDGeW~~DPdnPtV 366 (379)
|||+|.+||.-.+.
T Consensus 58 vdgeWsYD~ATkTF 71 (75)
T 2rpv_A 58 VDGEWTYDDATKTF 71 (75)
T ss_dssp CCSEEEEETTTTEE
T ss_pred CCceEeecCceeEE
Confidence 58999999876653
No 73
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=25.00 E-value=84 Score=28.77 Aligned_cols=11 Identities=36% Similarity=0.425 Sum_probs=4.9
Q ss_pred hhHHHHHhhhC
Q 017019 274 DEELIAAEESL 284 (379)
Q Consensus 274 ~~~LdaAeeaL 284 (379)
+..+..++..+
T Consensus 142 ~~~l~~a~~~l 152 (369)
T 4dk0_A 142 EIEVNTAETNL 152 (369)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 34444444443
No 74
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=24.38 E-value=85 Score=25.28 Aligned_cols=17 Identities=12% Similarity=0.227 Sum_probs=10.9
Q ss_pred eEEEEEEec--C---CceEEEE
Q 017019 288 EVVEIQYSG--D---GEIVEVA 304 (379)
Q Consensus 288 kpVTF~W~g--~---AkeVeVa 304 (379)
.+|+|+|.. . ...+.+.
T Consensus 41 ~tV~~~~~N~~~~~~~H~~~~~ 62 (140)
T 1qhq_A 41 TVVRLDFVNQNNLGVQHNWVLV 62 (140)
T ss_dssp CEEEEEEEECCSSCCCBCCEEE
T ss_pred CEEEEEEECCCCCCCceeEEEe
Confidence 467887765 2 5666665
No 75
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=24.27 E-value=66 Score=24.61 Aligned_cols=33 Identities=18% Similarity=0.207 Sum_probs=20.2
Q ss_pred HHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHH
Q 017019 224 IDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQ 256 (379)
Q Consensus 224 ~~~Lk~mlhqkElel~~~K~ele~~k~~LsvL~ 256 (379)
|..|......-+.+..+++.+.+..+..|+.|+
T Consensus 49 I~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~L~ 81 (83)
T 1nkp_B 49 IQYMRRKNHTHQQDIDDLKRQNALLEQQVRALG 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 555555555555666666666666666665554
No 76
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=24.26 E-value=1.7e+02 Score=28.21 Aligned_cols=54 Identities=7% Similarity=-0.001 Sum_probs=28.8
Q ss_pred HHhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHh---hhhhhhhhcccchhHHHHHh
Q 017019 228 KFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVT---EINKAEKLISDKDEELIAAE 281 (379)
Q Consensus 228 k~mlhqkElel~~~K~ele~~k~~LsvL~tKae~---eI~eAqklI~eK~~~LdaAe 281 (379)
..|.++.|-+..+++++.+++.-+++.++...+. +|.+..+.|.++..++..|.
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (487)
T 3oja_A 420 EEMYVEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATLQELV 476 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcccHHHHHH
Confidence 3355555555556666555555555555442222 55555566666655555443
No 77
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=23.58 E-value=1.9e+02 Score=26.13 Aligned_cols=24 Identities=13% Similarity=0.054 Sum_probs=9.4
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHH
Q 017019 237 ELSRLKEQIEKEKLALSVLQTKAV 260 (379)
Q Consensus 237 el~~~K~ele~~k~~LsvL~tKae 260 (379)
++..++.+++..+..|..+++..+
T Consensus 126 ~l~~~~~~l~~~~~~l~~~~~~~~ 149 (256)
T 3na7_A 126 KQEDLKKEMLELEKLALELESLVE 149 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444444433333333
No 78
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=23.39 E-value=1.1e+02 Score=25.49 Aligned_cols=57 Identities=19% Similarity=0.405 Sum_probs=39.5
Q ss_pred eEEEEEEecC---CceEEEEe-eeCCCccccccCCCCCCCccccccccCCCcEEEEE-EeCCeEEEEEEEE-CCEeeeC
Q 017019 288 EVVEIQYSGD---GEIVEVAG-SFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVL-WLYPGTYEIKFIV-DGQWKVD 360 (379)
Q Consensus 288 kpVTF~W~g~---AkeVeVaG-SFNnW~~~IpM~Kd~sss~~~~~~ske~GvWsltL-~LPPGrYEYKFIV-DGeW~~D 360 (379)
--|.+.+.++ -..|+|.| +=.+|. +|.+ . ...|++.- ..+.|-+.||+.. ||+|...
T Consensus 28 l~VlV~nv~G~GdI~~V~Ik~~~~~~W~---~M~r------------n-Ga~W~~~s~~~L~GplSfRvtts~G~~~va 90 (108)
T 2jnz_A 28 LVLDIKYTRPGDSLAEVELRQHGSEEWE---PLTK------------K-GNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 90 (108)
T ss_dssp EEEEEEEEBTTBCEEEEEEECTTCCCCE---ECEE------------E-TTEEEEECSSCCCSSEEEEEEETTTEEEEE
T ss_pred EEEEEEEeCCCCCEEEEEEEeCCCCcEe---Eccc------------c-CCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 4567777664 46789996 667884 7875 3 55898765 2355788888887 5887665
No 79
>3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal DOM; usher, N-terminal domain, ternary complex with chaperone and subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A
Probab=23.28 E-value=56 Score=26.43 Aligned_cols=18 Identities=28% Similarity=0.665 Sum_probs=13.1
Q ss_pred eCCeEEEEEEEECCEeee
Q 017019 342 LYPGTYEIKFIVDGQWKV 359 (379)
Q Consensus 342 LPPGrYEYKFIVDGeW~~ 359 (379)
++||+|.---+|+|+|+-
T Consensus 28 ~~PG~Y~vdI~vN~~~~~ 45 (125)
T 3bwu_D 28 LPPGTYRVDIYLNNGYMA 45 (125)
T ss_dssp SCSEEEEEEEEETTEEEE
T ss_pred cCCcEEEEEEEECCeEcc
Confidence 567777777777777764
No 80
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=23.22 E-value=79 Score=24.98 Aligned_cols=34 Identities=32% Similarity=0.475 Sum_probs=18.9
Q ss_pred hHHhhhccHHHHHHHHHhhhHHHHHHhHHHHHHHHH
Q 017019 213 SEARRRENQLEIDHLKFMLHQKEMELSRLKEQIEKE 248 (379)
Q Consensus 213 ~ea~~~~n~~e~~~Lk~mlhqkElel~~~K~ele~~ 248 (379)
.|..++ +.-|+.|...|.+||.++.+++++|-+-
T Consensus 33 eELr~k--d~~I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 33 EELRQR--DALIDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344444 3346666666666666666666665443
No 81
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=23.19 E-value=1e+02 Score=22.98 Aligned_cols=17 Identities=18% Similarity=-0.025 Sum_probs=10.5
Q ss_pred EEEEEEecC-CceEEEEe
Q 017019 289 VVEIQYSGD-GEIVEVAG 305 (379)
Q Consensus 289 pVTF~W~g~-AkeVeVaG 305 (379)
+|+|.+.++ ...|.+.+
T Consensus 28 ~V~~~n~~~~~H~~~~~~ 45 (97)
T 1b3i_A 28 TVEFVMNKVGPHNVIFDK 45 (97)
T ss_dssp EEEEEECSSCCCCBEEEE
T ss_pred EEEEEECCCCCeEEEEeC
Confidence 577776654 56666654
No 82
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=22.73 E-value=84 Score=25.74 Aligned_cols=69 Identities=17% Similarity=0.147 Sum_probs=34.3
Q ss_pred CCCcccccccCCccccCCCCCCCc-ccCC-cccccccchHHhhhccHHHHHHHHHhhhHHHHHHhHHHHHHH
Q 017019 177 NGSALTSKQIASFATVNHPLSEDH-LGTG-VEGADFDSSEARRRENQLEIDHLKFMLHQKEMELSRLKEQIE 246 (379)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~d~-~~~~-~~d~~kdl~ea~~~~n~~e~~~Lk~mlhqkElel~~~K~ele 246 (379)
-|+++---+|+|...... |+.+- -|.+ .-+|..+|-+|....|.+||+-..++|.|-.-.|.-+.+++.
T Consensus 9 vGsSSRDv~V~P~G~~~~-lrq~I~DKQ~~i~~Lt~eLq~A~~eaNpaeIA~~~~~L~qAraDL~~l~r~~a 79 (90)
T 4b6x_A 9 IGSSSRDVQVCPRGAGAA-LRQEIEDKQLMVNNLTDELQDAIDEANPAEIANTSQQLRHARADLADLQRRFA 79 (90)
T ss_dssp -------------CTTHH-HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCccceeeccccccHH-HHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 366666677777764211 11000 0111 114788888888888999999999988887766666655543
No 83
>1pgx_A Protein G; immunoglobulin binding protein; 1.66A {Streptococcus} SCOP: d.15.7.1
Probab=21.94 E-value=24 Score=28.50 Aligned_cols=15 Identities=40% Similarity=0.784 Sum_probs=11.9
Q ss_pred ECCEeeeCCCCCeec
Q 017019 353 VDGQWKVDPQRESVT 367 (379)
Q Consensus 353 VDGeW~~DPdnPtVt 367 (379)
|||+|.+||.-.+.+
T Consensus 52 vdgeWsYD~ATkTFT 66 (83)
T 1pgx_A 52 VDGVWTYDDATKTFT 66 (83)
T ss_dssp CCEEEEEETTTTEEE
T ss_pred CCceEeecccceeEE
Confidence 589999999877643
No 84
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=21.42 E-value=55 Score=31.29 Aligned_cols=25 Identities=24% Similarity=0.534 Sum_probs=19.7
Q ss_pred CCeEEEEEEEECCEee---eCCCCCeec
Q 017019 343 YPGTYEIKFIVDGQWK---VDPQRESVT 367 (379)
Q Consensus 343 PPGrYEYKFIVDGeW~---~DPdnPtVt 367 (379)
+.|.|.++|..+|+|+ +|+.-|+..
T Consensus 120 ~~G~y~vr~~~~G~W~~VvVDD~LP~~~ 147 (339)
T 2r9f_A 120 YAGIFHFQLWQFGEWVDVVVDDLLPTKD 147 (339)
T ss_dssp CCSEEEEEEEETTEEEEEEEESCEEEET
T ss_pred CCceEEEEEeeCCEEEEEEEcCCCcccC
Confidence 4689999999999995 666666654
No 85
>4gln_D D-RFX001; heterochiral protein-protein complex, D-protein antagonist, factor-inihibitor complex; HET: DTY DSG DTH DVA DPN DTR DGL DIL DAS; 1.60A {Synthetic} PDB: 4gls_D* 4gls_C*
Probab=21.10 E-value=31 Score=26.18 Aligned_cols=17 Identities=18% Similarity=0.505 Sum_probs=12.6
Q ss_pred EEEEC-CEeeeCCCCCee
Q 017019 350 KFIVD-GQWKVDPQRESV 366 (379)
Q Consensus 350 KFIVD-GeW~~DPdnPtV 366 (379)
..-|| |+|.+|+.-.+.
T Consensus 35 ~n~~d~geWtYddaTKTF 52 (56)
T 4gln_D 35 SXFSDFDDWTYDDATKTF 52 (56)
T ss_pred hcCCcCCeeEecCcceeE
Confidence 34567 999999977653
No 86
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=20.84 E-value=63 Score=26.50 Aligned_cols=18 Identities=22% Similarity=0.586 Sum_probs=13.9
Q ss_pred CeEEEEEEEECCEeeeCCCC
Q 017019 344 PGTYEIKFIVDGQWKVDPQR 363 (379)
Q Consensus 344 PGrYEYKFIVDGeW~~DPdn 363 (379)
.| |+|.|. +|.|+++-+.
T Consensus 67 sG-~hfd~~-~~~Wi~~r~g 84 (106)
T 1ew4_A 67 GG-YHFDLK-GDEWICDRSG 84 (106)
T ss_dssp CE-EEEEEE-TTEEEETTTC
T ss_pred Cc-eeeeec-CCEEEECCCC
Confidence 36 888874 9999988654
No 87
>1idp_A Scytalone dehydratase; lyase, melanine biosynthesis; 1.45A {Magnaporthe grisea} SCOP: d.17.4.1 PDB: 2std_A* 1std_A* 3std_A* 6std_A* 4std_A* 5std_A* 7std_A*
Probab=20.78 E-value=62 Score=28.28 Aligned_cols=23 Identities=17% Similarity=0.387 Sum_probs=18.3
Q ss_pred eEEEEEEE-ECCEeeeCCCCCeec
Q 017019 345 GTYEIKFI-VDGQWKVDPQRESVT 367 (379)
Q Consensus 345 GrYEYKFI-VDGeW~~DPdnPtVt 367 (379)
|.|+++|. +||.|+..-..+++.
T Consensus 129 G~Y~~~Y~r~dG~WkIa~~~~~~~ 152 (172)
T 1idp_A 129 SANLHWYKKIDGVWKFAGLKPDIR 152 (172)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ccceEEEEEECCEEEEEEEEEEEE
Confidence 78999998 699999887666644
No 88
>4abm_A Charged multivesicular BODY protein 4B; cell cycle, protein transport, HIV-1; 1.80A {Homo sapiens}
Probab=20.65 E-value=1.5e+02 Score=23.24 Aligned_cols=34 Identities=24% Similarity=0.230 Sum_probs=22.9
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Q 017019 237 ELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLI 270 (379)
Q Consensus 237 el~~~K~ele~~k~~LsvL~tKae~eI~eAqklI 270 (379)
++.+++.+++..+---..|+.+++.++..|.+.+
T Consensus 7 AI~~Lr~~~d~L~kkq~~L~~~i~~e~~~Ak~~~ 40 (79)
T 4abm_A 7 AIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHG 40 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666666666677777777777777766
No 89
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=20.12 E-value=2.6e+02 Score=22.96 Aligned_cols=45 Identities=11% Similarity=0.209 Sum_probs=19.6
Q ss_pred HHHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 017019 223 EIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAE 267 (379)
Q Consensus 223 e~~~Lk~mlhqkElel~~~K~ele~~k~~LsvL~tKae~eI~eAq 267 (379)
+|..||..+-.--+.-+.+..+++-.+-+|.-|....+++|.+-+
T Consensus 70 di~~lrK~lD~~~l~r~dLE~~iesL~eEl~FLKk~heeEl~eLq 114 (119)
T 3ol1_A 70 TLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQELQ 114 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444333333333444444444444444444444554443
No 90
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=20.04 E-value=2.1e+02 Score=22.92 Aligned_cols=27 Identities=30% Similarity=0.160 Sum_probs=15.1
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 017019 234 KEMELSRLKEQIEKEKLALSVLQTKAV 260 (379)
Q Consensus 234 kElel~~~K~ele~~k~~LsvL~tKae 260 (379)
.+-+.-++|.|...-.-.|..|-+|++
T Consensus 53 L~~en~qLk~E~~~wq~Rl~~LLgk~e 79 (81)
T 2jee_A 53 LERENNHLKEQQNGWQERLQALLGRME 79 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 444555555555555555666666553
Done!