Citrus Sinensis ID: 017021

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
Protein Sequence
MRMRGSSGILMVDMYILLTMALRNRVLMCNMFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHHHcccccccccccEEEEEEccccEEEEEccccccccccEEEEEEcccccEEEEEEEEccHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccEEEEEccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEccccccccccccccccccccccccccccccccEEEEEccccccccccEEEEEccccccccEEEEcccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHcccccHHHHHHHHHHHccccccccccHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccEEEEEEEcccEEEEEcccccccEEEEEEEcccEEEEEEEEccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHccEEEEEEEEccccccccccEEEEEEccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcccccEEEcccccHHccccccccccEcccccccEEccHHHcEEccEccccccccHHHccHHHHcccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHccHHHHHHHHccccccccccccHHHHHHcccccccccHHHHHcccccHHHHHHHHHHccccccccccHHHHHccHHHHHccccc
Coil and Loop (DISEMBL)
mrmrgssgiLMVDMYILLTMALRNRVLMCNMFNLITYIVFSAFADKIhskmgegtfgqvLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAkhdkggnrcvqIRNWFDYRNHICIVFEKLGSSLYDFLrknnyrsfpIDLVREIARQLLECIAFMHDLCmihtdlkpenvLLVSseyikvpdyksslhtpkdssyfkrmpkssaikvidfgsttyerpdqnyivstrhyrapevilglgwtypcdiwsvGCILVELCTGEALFQTHENLEHLAMMERVlgplpqhmLKRVDRHAEKYVRrgrldwpegaasreSIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGllrydptdrltarealrhpfftrdhlrr
Flexible Loop (DISEMBL)
mrmrgssgiLMVDMYILLTMALRNRVLMCNMFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQqlakhdkggnrcVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYikvpdyksslhtpkdssyfkrmpkssaikvidfgsttyerpdqnyivstrhYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYvrrgrldwpegaasresiksvMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTArealrhpfftrdhlrr
Low Complexity Region (SEG)
MRMRGSSGILMVDMYILLTMALRNRVLMCNMFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR
Disordered region (IsUnstruct)
*******GILMVDMYILLTMALRNRVLMCNMFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY********************AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP**********SVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF*******
Disordered Region (DISOPRED)
****************LLTMALRNRVLMCNMFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK**************MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR*******************************HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD****
Disordered Region (DISEMBL)
MRMRGSSGILMVDMYILLTMALRNRVLMCNMFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR
Disordered Region (DISPRO)
***************ILLTMALRNRVLMCNMFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH***
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRMRGSSGILMVDMYILLTMALRNRVLMCNMFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	379	2.2.26 [Sep-21-2011]
P51567	427	Serine/threonine-protein	yes	no	0.862	0.765	0.851	1e-170
P51566	467	Serine/threonine-protein	no	no	0.868	0.704	0.793	1e-158
P51568	400	Serine/threonine-protein	no	no	0.854	0.81	0.667	1e-130
Q10156	690	Dual specificity protein	yes	no	0.825	0.453	0.472	1e-86
O35491	499	Dual specificity protein	yes	no	0.831	0.631	0.475	2e-83
P49760	499	Dual specificity protein	yes	no	0.833	0.633	0.474	2e-83
P49762	832	Serine/threonine-protein	no	no	0.839	0.382	0.456	4e-80
Q9HAZ1	481	Dual specificity protein	no	no	0.815	0.642	0.475	1e-79
O35493	481	Dual specificity protein	no	no	0.815	0.642	0.466	8e-78
P49759	484	Dual specificity protein	no	no	0.807	0.632	0.458	3e-77

>sp|P51567|AFC2_ARATH Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1

 Score =  599 bits (1545), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 280/329 (85%), Positives = 310/329 (94%), Gaps = 2/329 (0%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           KI+SKMGEGTFGQVLECWDRERKEMVA+KIVRG+KKYREAAMIEIE+LQQL KHDKGGNR
Sbjct: 99  KIYSKMGEGTFGQVLECWDRERKEMVAVKIVRGVKKYREAAMIEIEMLQQLGKHDKGGNR 158

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI  QLLEC+AFMHDL 
Sbjct: 159 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIGWQLLECVAFMHDLR 218

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           MIHTDLKPEN+LLVSS+Y+K+P+YK S    +D  Y KR+PKSSAIKVIDFGSTTYER D
Sbjct: 219 MIHTDLKPENILLVSSDYVKIPEYKGS-RLQRDVCY-KRVPKSSAIKVIDFGSTTYERQD 276

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           Q YIVSTRHYRAPEVILGLGW+YPCD+WSVGCI+VELCTGEALFQTHENLEHLAMMERVL
Sbjct: 277 QTYIVSTRHYRAPEVILGLGWSYPCDVWSVGCIIVELCTGEALFQTHENLEHLAMMERVL 336

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
           GP PQ MLK+VDRH+EKYVRRGRLDWP+GA SR+S+K+V+KLPRLQNLIMQHVDHSAG+L
Sbjct: 337 GPFPQQMLKKVDRHSEKYVRRGRLDWPDGATSRDSLKAVLKLPRLQNLIMQHVDHSAGEL 396

Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFTR 374
            +++QGLLR+DP++R+TAREALRHPFF R
Sbjct: 397 INMVQGLLRFDPSERITAREALRHPFFAR 425

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 2EC: .EC: 1

>sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2

 Score =  558 bits (1439), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 262/330 (79%), Positives = 293/330 (88%), Gaps = 1/330 (0%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +I SKMGEGTFGQVLEC+D + KE+VAIK++R I KYREAAMIEI+VLQ+L +HD GG+R
Sbjct: 116 QILSKMGEGTFGQVLECFDNKNKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSR 175

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           CVQIRNWFDYRNHICIVFEKLG SLYDFLRKN+YRSFPIDLVRE+ RQLLE +A+MHDL 
Sbjct: 176 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLR 235

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IHTDLKPEN+LLVSSEYIK+PDYK      KD SYFK +PKSSAIK+IDFGSTT+E  D
Sbjct: 236 LIHTDLKPENILLVSSEYIKIPDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 295

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
            NYIVSTRHYRAPEVILG+GW YPCD+WS+GCILVELC+GEALFQTHENLEHLAMMERVL
Sbjct: 296 HNYIVSTRHYRAPEVILGVGWNYPCDLWSIGCILVELCSGEALFQTHENLEHLAMMERVL 355

Query: 286 GPLPQHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
           GPLP HM+ R DR +EKY RRG +LDWPEGA SR+S+K+V KLPRL NLIMQHVDHSAGD
Sbjct: 356 GPLPPHMVLRADRRSEKYFRRGAKLDWPEGATSRDSLKAVWKLPRLPNLIMQHVDHSAGD 415

Query: 345 LTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           L  LLQGLLRYDPT+R  AREAL HPFFTR
Sbjct: 416 LIDLLQGLLRYDPTERFKAREALNHPFFTR 445

Activator of yeast transcription factor, STE12.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P51568|AFC3_ARATH Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2

 Score =  466 bits (1199), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 219/328 (66%), Positives = 270/328 (82%), Gaps = 4/328 (1%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           KI SKMGEGTFG+VLECWDR+ KE VAIKI+R IKKYR+AAMIEI+VLQ+L K DKG  R
Sbjct: 72  KILSKMGEGTFGRVLECWDRDTKEYVAIKIIRSIKKYRDAAMIEIDVLQKLVKSDKGRTR 131

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           CVQ++NWFDYRNHICIVFEKLG SL+DFL++N Y +FP+ LVR+   QLLE +A+MH+L 
Sbjct: 132 CVQMKNWFDYRNHICIVFEKLGPSLFDFLKRNKYSAFPLALVRDFGCQLLESVAYMHELQ 191

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           ++HTDLKPEN+LLVSSE +K+PD K S     + ++F+ +PKSSAIK+IDFGST  +   
Sbjct: 192 LVHTDLKPENILLVSSENVKLPDNKRS---AANETHFRCLPKSSAIKLIDFGSTVCDNRI 248

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
            + IV TRHYR+PEVILGLGW+Y CD+WS+GCIL ELCTGEALFQTH+NLEHLAMMER L
Sbjct: 249 HHSIVQTRHYRSPEVILGLGWSYQCDLWSIGCILFELCTGEALFQTHDNLEHLAMMERAL 308

Query: 286 GPLPQHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
           GPLP+HM ++  R AEKY RRG RL+WPEGA SRESI++V +L RL++++ +HVD++   
Sbjct: 309 GPLPEHMTRKASRGAEKYFRRGCRLNWPEGANSRESIRAVKRLDRLKDMVSKHVDNTRSR 368

Query: 345 LTHLLQGLLRYDPTDRLTAREALRHPFF 372
              LL GLL YDP++RLTA EAL HPFF
Sbjct: 369 FADLLYGLLAYDPSERLTANEALDHPFF 396

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q10156|LKH1_SCHPO Dual specificity protein kinase lkh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lkh1 PE=1 SV=3

 Score =  320 bits (820), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 155/328 (47%), Positives = 227/328 (69%), Gaps = 15/328 (4%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG-NRCVQI 109
           +G GTFG+V++C+D+      AIK+ R I KYREA++IE+ VLQ +A  D    N+C+Q+
Sbjct: 368 LGHGTFGKVIQCYDQSTGRHCAIKVTRAIPKYREASLIELRVLQTIAHSDPTNENKCIQL 427

Query: 110 RNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHT 169
           R++FDYR HICIV +  G S++DFL+ NNY  FP+  ++ +++QL + +AF+H L ++HT
Sbjct: 428 RDYFDYRKHICIVTDLFGWSVFDFLKNNNYIPFPLKHIQMLSQQLFKSVAFLHSLGLVHT 487

Query: 170 DLKPENVLLVS--SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           DLKPENVLLVS  S  I++P Y++         Y +++  S  I++IDFGS T+E    +
Sbjct: 488 DLKPENVLLVSNASRTIRLP-YRN---------YSQKVLNSCEIRLIDFGSATFEDEYHS 537

Query: 228 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGP 287
            +VSTRHYRAPE+ILGLGW+YPCD+WS+GCILVEL TG+ALFQTHE+ EHL MME++LGP
Sbjct: 538 SVVSTRHYRAPEIILGLGWSYPCDVWSIGCILVELFTGQALFQTHEDSEHLCMMEKILGP 597

Query: 288 LPQHMLKRVDRHAEKYVRR-GRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT 346
             ++M+ R  R ++++ +  G++ +P     ++SI  +  L  L+ +        A  L 
Sbjct: 598 FDRNMISRSSRTSQRFFKSDGKVRYPLSNTPKKSINYLQSLQTLEQIFAVSSPEVAL-LL 656

Query: 347 HLLQGLLRYDPTDRLTAREALRHPFFTR 374
            LL+ +  YDP  R+TA+EAL HPFFT+
Sbjct: 657 DLLKKVFVYDPKRRITAKEALWHPFFTQ 684

Protein kinase that may act as a negative regulator of filamentous growth and flocculation. Appears to have a role in normal cell wall and septum formation and in cell seperation. May have antagonistic function in the regulation of beta-glucan distribution between the sites for cell wall and septum assembly.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|O35491|CLK2_MOUSE Dual specificity protein kinase CLK2 OS=Mus musculus GN=Clk2 PE=1 SV=2

 Score =  310 bits (793), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 157/330 (47%), Positives = 221/330 (66%), Gaps = 15/330 (4%)

Query: 46  KIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD-KGG 103
           +I S +GEGTFG+V++C D  R    VA+KI++ ++KY+EAA +EI VL+++ + D    
Sbjct: 163 EIVSTLGEGTFGRVVQCVDHRRGGTQVALKIIKNVEKYKEAARLEINVLEKINEKDPDNK 222

Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
           N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +PI  VR +A QL + + F+HD
Sbjct: 223 NLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHD 282

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T++ 
Sbjct: 283 NKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSATFDH 334

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
              + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAMMER
Sbjct: 335 EHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMER 394

Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
           +LGP+P  M+++  +  +KY  RGRLDW E  ++   ++   K P  + L  +  DH   
Sbjct: 395 ILGPVPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRENCK-PLRRYLTSEAEDHHQ- 450

Query: 344 DLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
            L  L++ +L Y+P  RLT  EAL+HPFF 
Sbjct: 451 -LFDLIENMLEYEPAKRLTLGEALQHPFFA 479

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49760|CLK2_HUMAN Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1

 Score =  309 bits (792), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 157/331 (47%), Positives = 222/331 (67%), Gaps = 15/331 (4%)

Query: 46  KIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD-KGG 103
           +I S +GEGTFG+V++C D  R    VA+KI++ ++KY+EAA +EI VL+++ + D    
Sbjct: 164 EIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNK 223

Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
           N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +PI  VR +A QL + + F+HD
Sbjct: 224 NLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHD 283

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T++ 
Sbjct: 284 NKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSATFDH 335

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
              + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAMMER
Sbjct: 336 EHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMER 395

Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
           +LGP+P  M+++  +  +KY  RGRLDW E  ++   ++   K P  + L  +  +H   
Sbjct: 396 ILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRENCK-PLRRYLTSEAEEHHQ- 451

Query: 344 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            L  L++ +L Y+P  RLT  EAL+HPFF R
Sbjct: 452 -LFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49762|DOA_DROME Serine/threonine-protein kinase Doa OS=Drosophila melanogaster GN=Doa PE=1 SV=2

 Score =  298 bits (764), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 152/333 (45%), Positives = 217/333 (65%), Gaps = 15/333 (4%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           KI + +GEGTFG+V++  D ER   +A+KI++ ++KYREAA +EI  L+++A+ D   + 
Sbjct: 480 KIMATLGEGTFGRVVKVKDMERDYCMALKIIKNVEKYREAAKLEINALEKIAQKDPHCDH 539

Query: 106 -CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            CV++ +WFDY  H+CIVFE LG S++DFLR+NNY  +P+D VR +A QL   + F+HD 
Sbjct: 540 LCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENNYEPYPLDQVRHMAYQLCYSVKFLHDN 599

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            + HTDLKPEN+L V S+Y    ++K +           R  K++ +++IDFGS T++  
Sbjct: 600 RLTHTDLKPENILFVDSDYTSHYNHKINREV--------RRVKNTDVRLIDFGSATFDHE 651

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
             + IVSTRHYRAPEVIL LGW+ PCD+WS+GCIL EL  G  LFQTH+N EHLAMMER+
Sbjct: 652 HHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYLGITLFQTHDNREHLAMMERI 711

Query: 285 LGPLPQHMLKR---VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
           LG +P  M +      +   KY   G+LDW E +++   ++   K P     +    DH 
Sbjct: 712 LGQIPYRMARNHTLYSKTKTKYFYHGKLDWDEKSSAGRYVRDHCK-PLFLCQLSDSEDHC 770

Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
             +L  L++ +L Y+P+ R+T  EAL HPFF R
Sbjct: 771 --ELFSLIKKMLEYEPSSRITLGEALHHPFFDR 801

Negative regulator of the copia retrotransposon element of the white (w) gene. In the eye, it is required for normal pigmentation, photoreceptor cell development and for organization of interommatidial bristles. Also essential for embryonic segmentation and differentiation of the nervous system. Functions in the control of alternative splicing by phosphorylating the argine/serine-rich splicing factors, SR proteins.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q9HAZ1|CLK4_HUMAN Dual specificity protein kinase CLK4 OS=Homo sapiens GN=CLK4 PE=1 SV=1

 Score =  297 bits (760), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 154/324 (47%), Positives = 216/324 (66%), Gaps = 15/324 (4%)

Query: 51  MGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG-NRCVQ 108
           +GEG FG+V+EC D     M VA+KIV+ + +YREAA  EI+VL+ L   D     RCVQ
Sbjct: 165 LGEGAFGKVVECIDHGMDGMHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQ 224

Query: 109 IRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
           +  WFD+  H+CIVFE LG S YDF+++N++  F ID +R++A Q+ + I F+H   + H
Sbjct: 225 MLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKLTH 284

Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
           TDLKPEN+L V S+Y  V  Y S +   +D    +R  K++ IKV+DFGS TY+    + 
Sbjct: 285 TDLKPENILFVKSDY--VVKYNSKM--KRD----ERTLKNTDIKVVDFGSATYDDEHHST 336

Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 288
           +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +FQTH++ EHLAMMER+LGP+
Sbjct: 337 LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPI 396

Query: 289 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 348
           PQHM+++  +   KY    +LDW E +++   ++   K   L+  ++ H D     L  L
Sbjct: 397 PQHMIQKTRK--RKYFHHNQLDWDEHSSAGRYVRRRCKP--LKEFMLCH-DEEHEKLFDL 451

Query: 349 LQGLLRYDPTDRLTAREALRHPFF 372
           ++ +L YDPT R+T  EAL+HPFF
Sbjct: 452 VRRMLEYDPTQRITLDEALQHPFF 475

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates SRSF1 and SRSF3. Required for the regulation of alternative splicing of MAPT/TAU. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|O35493|CLK4_MOUSE Dual specificity protein kinase CLK4 OS=Mus musculus GN=Clk4 PE=1 SV=1

 Score =  291 bits (744), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 151/324 (46%), Positives = 214/324 (66%), Gaps = 15/324 (4%)

Query: 51  MGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG-NRCVQ 108
           +GEG FG+V+EC D     + VA+KIV+ + +YREAA  EI+VL+ L   D     RCVQ
Sbjct: 165 LGEGAFGKVVECIDHGMDGLHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQ 224

Query: 109 IRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
           +  WFD+  H+CIVFE LG S YDF+++N++  F ID +R++A Q+ + I F+H   + H
Sbjct: 225 MLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKLTH 284

Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
           TDLKPEN+L V S+Y  V  Y S +   +D    +R  K++ IKV+DFGS TY+    + 
Sbjct: 285 TDLKPENILFVKSDY--VVKYNSKM--KRD----ERTLKNTDIKVVDFGSATYDDEHHST 336

Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 288
           +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +FQTH++ EHLAMMER+LGP+
Sbjct: 337 LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPI 396

Query: 289 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 348
           P HM+++  +   KY    +LDW E +++   ++   K   L+  ++ H D     L  L
Sbjct: 397 PAHMIQKTRK--RKYFHHNQLDWDEHSSAGRYVRRRCKP--LKEFMLCH-DEEHEKLFDL 451

Query: 349 LQGLLRYDPTDRLTAREALRHPFF 372
           ++ +L YDP  R+T  EAL+HPFF
Sbjct: 452 VRRMLEYDPARRITLDEALQHPFF 475

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates SRSF1 and SRSF3. Required for the regulation of alternative splicing of MAPT/TAU. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49759|CLK1_HUMAN Dual specificity protein kinase CLK1 OS=Homo sapiens GN=CLK1 PE=1 SV=2

 Score =  289 bits (739), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 150/327 (45%), Positives = 211/327 (64%), Gaps = 21/327 (6%)

Query: 51  MGEGTFGQVLECWD-RERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQ 108
           +GEG FG+V+EC D +     VA+KIV+ + +Y EAA  EI+VL+ L   D     RCVQ
Sbjct: 167 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQ 226

Query: 109 IRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
           +  WF++  HICIVFE LG S YDF+++N +  F +D +R++A Q+ + + F+H   + H
Sbjct: 227 MLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTH 286

Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS---SAIKVIDFGSTTYERPD 225
           TDLKPEN+L V S+Y +        + PK     KR  ++     IKV+DFGS TY+   
Sbjct: 287 TDLKPENILFVQSDYTEA-------YNPK----IKRDERTLINPDIKVVDFGSATYDDEH 335

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
            + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +F TH++ EHLAMMER+L
Sbjct: 336 HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL 395

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
           GPLP+HM+++  +   KY    RLDW E +++   +    K P  + ++ Q V+H    L
Sbjct: 396 GPLPKHMIQKTRK--RKYFHHDRLDWDEHSSAGRYVSRRCK-PLKEFMLSQDVEHER--L 450

Query: 346 THLLQGLLRYDPTDRLTAREALRHPFF 372
             L+Q +L YDP  R+T REAL+HPFF
Sbjct: 451 FDLIQKMLEYDPAKRITLREALKHPFF 477

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates: SRSF1, SRSF3 and PTPN1. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells and adenovirus E1A pre-mRNA.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	379
255540473	435	afc, putative [Ricinus communis] gi|2235	0.881	0.767	0.922	0.0
225456860	435	PREDICTED: serine/threonine-protein kina	0.881	0.767	0.925	0.0
224135977	427	predicted protein [Populus trichocarpa]	0.878	0.779	0.906	0.0
7211773	437	protein kinase MK5 [Mesembryanthemum cry	0.881	0.764	0.883	1e-179
224121850	422	predicted protein [Populus trichocarpa]	0.868	0.779	0.899	1e-178
356508738	425	PREDICTED: serine/threonine-protein kina	0.875	0.781	0.901	1e-178
356516617	425	PREDICTED: serine/threonine-protein kina	0.875	0.781	0.895	1e-178
255647343	425	unknown [Glycine max]	0.875	0.781	0.895	1e-177
357461735	426	Serine/threonine protein kinase AFC2 [Me	0.875	0.779	0.886	1e-177
356508740	427	PREDICTED: serine/threonine-protein kina	0.881	0.782	0.898	1e-177

>gi|255540473|ref|XP_002511301.1| afc, putative [Ricinus communis] gi|223550416|gb|EEF51903.1| afc, putative [Ricinus communis]

 Score =  658 bits (1698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/334 (92%), Positives = 322/334 (96%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEI+VLQQL KHDKGGNR
Sbjct: 102 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIDVLQQLGKHDKGGNR 161

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           CVQIRNWFDYRNHICIVFEKLG SLYDFLRKNNYRSFPIDLVREI RQLLECIAFMHDL 
Sbjct: 162 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECIAFMHDLH 221

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IHTDLKPEN+LLVS +Y+KVPDYK S  +PKDSSYFKR+PKSSA+KVIDFGSTTYER D
Sbjct: 222 LIHTDLKPENILLVSPDYVKVPDYKGSTRSPKDSSYFKRVPKSSAVKVIDFGSTTYERQD 281

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           QNYIVSTRHYRAPEVILGLGW+YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL
Sbjct: 282 QNYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 341

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
           GPLPQHMLKR+DRHAEKYVRRGRLDWPEGA SRESIK+V+KLPRLQNL+MQHVDHSAGDL
Sbjct: 342 GPLPQHMLKRIDRHAEKYVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGDL 401

Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
            HLLQGLLRYDP+DRLTAREALRHPFF RDHLRR
Sbjct: 402 IHLLQGLLRYDPSDRLTAREALRHPFFARDHLRR 435

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456860|ref|XP_002279764.1| PREDICTED: serine/threonine-protein kinase AFC2 [Vitis vinifera] gi|297733679|emb|CBI14926.3| unnamed protein product [Vitis vinifera]

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/334 (92%), Positives = 321/334 (96%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           KI+SKMGEGTFGQVLECWDRERKEMVA+KIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR
Sbjct: 101 KINSKMGEGTFGQVLECWDRERKEMVAVKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 160

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           CVQIRNWFDYRNHICIVFEKLG SLYDFLRKNNYRSFPIDLVREI RQLLEC+AFMHDL 
Sbjct: 161 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLR 220

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IHTDLKPEN+LLVS EY+KVPDYK S  +PKD SYFKR+PKSSAIKVIDFGSTTYER D
Sbjct: 221 LIHTDLKPENILLVSPEYVKVPDYKVSSRSPKDGSYFKRVPKSSAIKVIDFGSTTYERQD 280

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           QNYIVSTRHYRAPEVILGLGW+YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL
Sbjct: 281 QNYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 340

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
           GPLPQHMLKRVDRHAEKYVRRGRLDWPEGA SRESIK+V+KLPRLQNLIMQHVDHSAGDL
Sbjct: 341 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGATSRESIKAVLKLPRLQNLIMQHVDHSAGDL 400

Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
            HLLQGLLRYDP+DRLTA  ALRHPFFTRDHLRR
Sbjct: 401 IHLLQGLLRYDPSDRLTALGALRHPFFTRDHLRR 434

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135977|ref|XP_002322208.1| predicted protein [Populus trichocarpa] gi|222869204|gb|EEF06335.1| predicted protein [Populus trichocarpa]

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/333 (90%), Positives = 321/333 (96%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           KIH+KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY+EAAMIEIEVLQQL KHDKGGNR
Sbjct: 94  KIHNKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYKEAAMIEIEVLQQLGKHDKGGNR 153

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           CVQIRNWFDYRNHICIVFEKLG SLYDFLRKNNYRSFPID VREI RQLLEC+AFMHDL 
Sbjct: 154 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDHVREIGRQLLECVAFMHDLH 213

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           MIHTDLKPEN+LLVSS+Y+KVPDYK+S  +PKDSSY+KR+PKSSAIKVIDFGSTTYER D
Sbjct: 214 MIHTDLKPENILLVSSDYVKVPDYKNSTRSPKDSSYYKRVPKSSAIKVIDFGSTTYERQD 273

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           QNYIVSTRHYRAPEVILGLGW+YPCD+WSVGCILVELCTGEALFQTHENLEHLAMMERVL
Sbjct: 274 QNYIVSTRHYRAPEVILGLGWSYPCDVWSVGCILVELCTGEALFQTHENLEHLAMMERVL 333

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
           GP+PQ+MLKRVDRHAEK+VRRGRLDWPEGAASRESIK+V+KLPRLQNL+MQHVDHSAGDL
Sbjct: 334 GPMPQNMLKRVDRHAEKFVRRGRLDWPEGAASRESIKAVLKLPRLQNLVMQHVDHSAGDL 393

Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            HLLQGLLRYDP DRLTAREALRHPFF +DH R
Sbjct: 394 IHLLQGLLRYDPMDRLTAREALRHPFFAKDHRR 426

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|7211773|gb|AAF40430.1| protein kinase MK5 [Mesembryanthemum crystallinum]

 Score =  633 bits (1632), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 295/334 (88%), Positives = 316/334 (94%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           KIH KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEI+VLQQL KHDKGG+R
Sbjct: 104 KIHGKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIDVLQQLGKHDKGGSR 163

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNY  FPIDLVRE  RQLL+C+AFMHDL 
Sbjct: 164 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYGPFPIDLVRENGRQLLDCVAFMHDLH 223

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IHTDLKPENVLLVSS+Y+K+ DYK    +PKDSSY+K++PKSSAIKVIDFGSTTYERPD
Sbjct: 224 LIHTDLKPENVLLVSSDYVKIRDYKGFSRSPKDSSYYKKVPKSSAIKVIDFGSTTYERPD 283

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           QNYIVSTRHYRAPEVILGLGW+YPCD+WSVGCILVELC+GEALFQTHENLE LAMMERVL
Sbjct: 284 QNYIVSTRHYRAPEVILGLGWSYPCDVWSVGCILVELCSGEALFQTHENLEDLAMMERVL 343

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
           GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESI++V KL RLQNL+MQHVDHS GD 
Sbjct: 344 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIRAVTKLLRLQNLVMQHVDHSGGDF 403

Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
            HLLQGLLRYDP+DRLTAREA+RHPFFTRD+LRR
Sbjct: 404 IHLLQGLLRYDPSDRLTAREAVRHPFFTRDNLRR 437

Source: Mesembryanthemum crystallinum

Species: Mesembryanthemum crystallinum

Genus: Mesembryanthemum

Family: Aizoaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121850|ref|XP_002318688.1| predicted protein [Populus trichocarpa] gi|222859361|gb|EEE96908.1| predicted protein [Populus trichocarpa]

 Score =  632 bits (1630), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 296/329 (89%), Positives = 312/329 (94%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQ L KHDKG NR
Sbjct: 94  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQNLGKHDKGSNR 153

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           CVQIRNWFDYRNHICIVFEKLG SLYDFLRKNNYRSFPIDLVREI RQLLEC+AFMHDL 
Sbjct: 154 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLR 213

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           MIHTDLKPEN+LLVSS+Y+KVPDYK+S  +PKD SY+KR+PKSSAIKVIDFGSTTYER D
Sbjct: 214 MIHTDLKPENILLVSSDYVKVPDYKNSSRSPKDISYYKRVPKSSAIKVIDFGSTTYERQD 273

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           QNYIVSTRHYRAPEVILGLGW+YPCDIWS GCILVELCTGEALFQTHENLEHLAMMERVL
Sbjct: 274 QNYIVSTRHYRAPEVILGLGWSYPCDIWSAGCILVELCTGEALFQTHENLEHLAMMERVL 333

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
           GP+PQH+LKRVDRHA KYVRRGRLDWPEGAASRES+K+V+KLPRLQNL+MQHVD SAGDL
Sbjct: 334 GPMPQHILKRVDRHAGKYVRRGRLDWPEGAASRESMKAVLKLPRLQNLVMQHVDQSAGDL 393

Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFTR 374
            HLLQGLLRYDP DRLTAREALRHPF  +
Sbjct: 394 IHLLQGLLRYDPLDRLTAREALRHPFLAK 422

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508738|ref|XP_003523111.1| PREDICTED: serine/threonine-protein kinase AFC2-like isoform 1 [Glycine max]

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 301/334 (90%), Positives = 315/334 (94%), Gaps = 2/334 (0%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQL KHDKG NR
Sbjct: 94  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLGKHDKGSNR 153

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           CVQIRNWFDYRNHICIVFEKLG SLYDFLRKN+YRSFPIDLVREI  QLLEC+AFMHDL 
Sbjct: 154 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREIGWQLLECVAFMHDLR 213

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           MIHTDLKPEN+LLVS EY+K+PDYKS+  +P  SS+FKR+PKSSAIKVIDFGSTTYER D
Sbjct: 214 MIHTDLKPENILLVSPEYLKIPDYKSTTRSP--SSFFKRVPKSSAIKVIDFGSTTYERED 271

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           Q YIVSTRHYRAPEVILGLGW+YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL
Sbjct: 272 QTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 331

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
           GP+PQ MLKRVDRHAEKYVRRGRLDWPEGA SRESIK+VMKLPRLQNLIMQHVDHSAGDL
Sbjct: 332 GPIPQQMLKRVDRHAEKYVRRGRLDWPEGAISRESIKAVMKLPRLQNLIMQHVDHSAGDL 391

Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
            HLLQGLLRYDP +RLTAR+ALRH FF RDHLRR
Sbjct: 392 IHLLQGLLRYDPFERLTARDALRHSFFMRDHLRR 425

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516617|ref|XP_003526990.1| PREDICTED: serine/threonine-protein kinase AFC2-like [Glycine max]

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 299/334 (89%), Positives = 315/334 (94%), Gaps = 2/334 (0%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           KIH KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAM+EIEVLQQL KHDKG NR
Sbjct: 94  KIHGKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMVEIEVLQQLGKHDKGSNR 153

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           CVQIRNWFDYRNHICIVFEKLG SLYDFLRKN+YRSFPIDLVREI  QLLEC+AFMHDL 
Sbjct: 154 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREIGWQLLECVAFMHDLH 213

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           MIHTDLKPEN+LLVS EY+K+PDYKS+  +P  SS+FKR+PKSSAIKVIDFGSTTYER D
Sbjct: 214 MIHTDLKPENILLVSPEYLKIPDYKSTTRSP--SSFFKRVPKSSAIKVIDFGSTTYERED 271

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           Q YIVSTRHYRAPEVILGLGW+YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL
Sbjct: 272 QTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 331

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
           GP+PQ MLKRVDRHAEKYVRRGRLDWPEGAASRESIK+VMKLPRLQN+IMQHVDHSAGDL
Sbjct: 332 GPIPQQMLKRVDRHAEKYVRRGRLDWPEGAASRESIKAVMKLPRLQNIIMQHVDHSAGDL 391

Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
            HLLQGLLRYDP +RLTAR+ALRH FFTRD LRR
Sbjct: 392 IHLLQGLLRYDPFERLTARDALRHSFFTRDQLRR 425

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255647343|gb|ACU24138.1| unknown [Glycine max]

 Score =  628 bits (1620), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 299/334 (89%), Positives = 314/334 (94%), Gaps = 2/334 (0%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           KIH KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAM+EIEVLQQL KHDKG NR
Sbjct: 94  KIHGKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMVEIEVLQQLGKHDKGSNR 153

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           CVQIRNWFDYRNHICIVFEKLG SLYDFLRKN+YRSFPIDLVREI  QLLEC+AFMHDL 
Sbjct: 154 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREIGWQLLECVAFMHDLH 213

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           MIHTDLKPEN+LLVS EY+K+PDYKS+  +P  SS+FKR+PKSSAIKVIDFGSTTYER D
Sbjct: 214 MIHTDLKPENILLVSPEYLKIPDYKSTTRSP--SSFFKRVPKSSAIKVIDFGSTTYERED 271

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           Q YIVSTRHYRAPEVILGLGW+YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL
Sbjct: 272 QTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 331

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
           GP+PQ MLKRVDRHAEKYVRRGRLDWPEGAASRESIK+VMKLPRLQN IMQHVDHSAGDL
Sbjct: 332 GPIPQQMLKRVDRHAEKYVRRGRLDWPEGAASRESIKAVMKLPRLQNTIMQHVDHSAGDL 391

Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
            HLLQGLLRYDP +RLTAR+ALRH FFTRD LRR
Sbjct: 392 IHLLQGLLRYDPFERLTARDALRHSFFTRDQLRR 425

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357461735|ref|XP_003601149.1| Serine/threonine protein kinase AFC2 [Medicago truncatula] gi|355490197|gb|AES71400.1| Serine/threonine protein kinase AFC2 [Medicago truncatula]

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 296/334 (88%), Positives = 315/334 (94%), Gaps = 2/334 (0%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++H KMGEGTFGQVLECWDRERKEMVAIK+VR IKKYREAAMIEIE+LQQL KHDKGGNR
Sbjct: 95  RVHGKMGEGTFGQVLECWDRERKEMVAIKVVRAIKKYREAAMIEIEMLQQLGKHDKGGNR 154

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           CVQIRNWFDYRNHICIVFEKLG SLYDFLRKNNYRSFPIDLVREI RQLLEC+AFMHDL 
Sbjct: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLH 214

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           MIHTDLKPEN+LLVSSEY+K+PDYKSS   P   S++KR+PKSSAIKVIDFGSTTYER +
Sbjct: 215 MIHTDLKPENILLVSSEYLKIPDYKSSSRAP--CSFYKRVPKSSAIKVIDFGSTTYEREN 272

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           QNYIVSTRHYRAPEVILGLGW+YPCD+WSVGCILVELCTGEALFQTHENLEHLAMMERVL
Sbjct: 273 QNYIVSTRHYRAPEVILGLGWSYPCDVWSVGCILVELCTGEALFQTHENLEHLAMMERVL 332

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
           G LPQ +LKRVDRHAEKYVRRGRLDWPEGA SRESIK+VMKLPRLQNLIMQHVDHSAGDL
Sbjct: 333 GLLPQQLLKRVDRHAEKYVRRGRLDWPEGANSRESIKAVMKLPRLQNLIMQHVDHSAGDL 392

Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
            HLLQGLLRYDP +R+TAR+ALRHPFF RDHLRR
Sbjct: 393 IHLLQGLLRYDPFERVTARDALRHPFFMRDHLRR 426

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508740|ref|XP_003523112.1| PREDICTED: serine/threonine-protein kinase AFC2-like isoform 2 [Glycine max]

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 300/334 (89%), Positives = 312/334 (93%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQL KHDKG NR
Sbjct: 94  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLGKHDKGSNR 153

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           CVQIRNWFDYRNHICIVFEKLG SLYDFLRKN+YRSFPIDLVREI  QLLEC+AFMHDL 
Sbjct: 154 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREIGWQLLECVAFMHDLR 213

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           MIHTDLKPEN+LLVS EY+K+PDYK    T   SS+FKR+PKSSAIKVIDFGSTTYER D
Sbjct: 214 MIHTDLKPENILLVSPEYLKIPDYKFISTTRSPSSFFKRVPKSSAIKVIDFGSTTYERED 273

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           Q YIVSTRHYRAPEVILGLGW+YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL
Sbjct: 274 QTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 333

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
           GP+PQ MLKRVDRHAEKYVRRGRLDWPEGA SRESIK+VMKLPRLQNLIMQHVDHSAGDL
Sbjct: 334 GPIPQQMLKRVDRHAEKYVRRGRLDWPEGAISRESIKAVMKLPRLQNLIMQHVDHSAGDL 393

Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
            HLLQGLLRYDP +RLTAR+ALRH FF RDHLRR
Sbjct: 394 IHLLQGLLRYDPFERLTARDALRHSFFMRDHLRR 427

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	379
TAIR|locus:2121984	427	FC2 "FUS3-complementing gene 2	0.862	0.765	0.851	7e-157
TAIR|locus:2084006	467	FC1 "FUS3-complementing gene 1	0.868	0.704	0.793	1.5e-145
TAIR|locus:2125622	400	AME3 [Arabidopsis thaliana (ta	0.854	0.81	0.667	2.5e-120
UNIPROTKB|E1B9Q2	500	CLK2 "Uncharacterized protein"	0.833	0.632	0.474	3.7e-80
UNIPROTKB|F1P919	612	CLK2 "Uncharacterized protein"	0.833	0.516	0.474	3.7e-80
UNIPROTKB|B1AVT0	497	CLK2 "Dual-specificity protein	0.833	0.635	0.474	3.7e-80
UNIPROTKB|P49760	499	CLK2 "Dual specificity protein	0.833	0.633	0.474	3.7e-80
UNIPROTKB|F1RLJ5	500	CLK2 "Uncharacterized protein"	0.833	0.632	0.474	3.7e-80
MGI|MGI:1098669	499	Clk2 "CDC-like kinase 2" [Mus	0.828	0.629	0.477	4.7e-80
RGD|1359711	500	Clk2 "CDC-like kinase 2" [Ratt	0.828	0.628	0.477	6e-80

TAIR|locus:2121984 FC2 "FUS3-complementing gene 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1529 (543.3 bits), Expect = 7.0e-157, P = 7.0e-157
 Identities = 280/329 (85%), Positives = 310/329 (94%)

Query:    46 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
             KI+SKMGEGTFGQVLECWDRERKEMVA+KIVRG+KKYREAAMIEIE+LQQL KHDKGGNR
Sbjct:    99 KIYSKMGEGTFGQVLECWDRERKEMVAVKIVRGVKKYREAAMIEIEMLQQLGKHDKGGNR 158

Query:   106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI  QLLEC+AFMHDL 
Sbjct:   159 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIGWQLLECVAFMHDLR 218

Query:   166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
             MIHTDLKPEN+LLVSS+Y+K+P+YK S    +D  Y KR+PKSSAIKVIDFGSTTYER D
Sbjct:   219 MIHTDLKPENILLVSSDYVKIPEYKGS-RLQRDVCY-KRVPKSSAIKVIDFGSTTYERQD 276

Query:   226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
             Q YIVSTRHYRAPEVILGLGW+YPCD+WSVGCI+VELCTGEALFQTHENLEHLAMMERVL
Sbjct:   277 QTYIVSTRHYRAPEVILGLGWSYPCDVWSVGCIIVELCTGEALFQTHENLEHLAMMERVL 336

Query:   286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
             GP PQ MLK+VDRH+EKYVRRGRLDWP+GA SR+S+K+V+KLPRLQNLIMQHVDHSAG+L
Sbjct:   337 GPFPQQMLKKVDRHSEKYVRRGRLDWPDGATSRDSLKAVLKLPRLQNLIMQHVDHSAGEL 396

Query:   346 THLLQGLLRYDPTDRLTAREALRHPFFTR 374
              +++QGLLR+DP++R+TAREALRHPFF R
Sbjct:   397 INMVQGLLRFDPSERITAREALRHPFFAR 425

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0004672 "protein kinase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006397 "mRNA processing" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0045727 "positive regulation of translation" evidence=RCA

TAIR|locus:2084006 FC1 "FUS3-complementing gene 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1422 (505.6 bits), Expect = 1.5e-145, P = 1.5e-145
 Identities = 262/330 (79%), Positives = 293/330 (88%)

Query:    46 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
             +I SKMGEGTFGQVLEC+D + KE+VAIK++R I KYREAAMIEI+VLQ+L +HD GG+R
Sbjct:   116 QILSKMGEGTFGQVLECFDNKNKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSR 175

Query:   106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             CVQIRNWFDYRNHICIVFEKLG SLYDFLRKN+YRSFPIDLVRE+ RQLLE +A+MHDL 
Sbjct:   176 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLR 235

Query:   166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
             +IHTDLKPEN+LLVSSEYIK+PDYK      KD SYFK +PKSSAIK+IDFGSTT+E  D
Sbjct:   236 LIHTDLKPENILLVSSEYIKIPDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 295

Query:   226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
              NYIVSTRHYRAPEVILG+GW YPCD+WS+GCILVELC+GEALFQTHENLEHLAMMERVL
Sbjct:   296 HNYIVSTRHYRAPEVILGVGWNYPCDLWSIGCILVELCSGEALFQTHENLEHLAMMERVL 355

Query:   286 GPLPQHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
             GPLP HM+ R DR +EKY RRG +LDWPEGA SR+S+K+V KLPRL NLIMQHVDHSAGD
Sbjct:   356 GPLPPHMVLRADRRSEKYFRRGAKLDWPEGATSRDSLKAVWKLPRLPNLIMQHVDHSAGD 415

Query:   345 LTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
             L  LLQGLLRYDPT+R  AREAL HPFFTR
Sbjct:   416 LIDLLQGLLRYDPTERFKAREALNHPFFTR 445

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0045727 "positive regulation of translation" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2125622 AME3 [Arabidopsis thaliana (taxid:3702)]

 Score = 1184 (421.8 bits), Expect = 2.5e-120, P = 2.5e-120
 Identities = 219/328 (66%), Positives = 270/328 (82%)

Query:    46 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
             KI SKMGEGTFG+VLECWDR+ KE VAIKI+R IKKYR+AAMIEI+VLQ+L K DKG  R
Sbjct:    72 KILSKMGEGTFGRVLECWDRDTKEYVAIKIIRSIKKYRDAAMIEIDVLQKLVKSDKGRTR 131

Query:   106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             CVQ++NWFDYRNHICIVFEKLG SL+DFL++N Y +FP+ LVR+   QLLE +A+MH+L 
Sbjct:   132 CVQMKNWFDYRNHICIVFEKLGPSLFDFLKRNKYSAFPLALVRDFGCQLLESVAYMHELQ 191

Query:   166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
             ++HTDLKPEN+LLVSSE +K+PD K S     + ++F+ +PKSSAIK+IDFGST  +   
Sbjct:   192 LVHTDLKPENILLVSSENVKLPDNKRSA---ANETHFRCLPKSSAIKLIDFGSTVCDNRI 248

Query:   226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
              + IV TRHYR+PEVILGLGW+Y CD+WS+GCIL ELCTGEALFQTH+NLEHLAMMER L
Sbjct:   249 HHSIVQTRHYRSPEVILGLGWSYQCDLWSIGCILFELCTGEALFQTHDNLEHLAMMERAL 308

Query:   286 GPLPQHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
             GPLP+HM ++  R AEKY RRG RL+WPEGA SRESI++V +L RL++++ +HVD++   
Sbjct:   309 GPLPEHMTRKASRGAEKYFRRGCRLNWPEGANSRESIRAVKRLDRLKDMVSKHVDNTRSR 368

Query:   345 LTHLLQGLLRYDPTDRLTAREALRHPFF 372
                LL GLL YDP++RLTA EAL HPFF
Sbjct:   369 FADLLYGLLAYDPSERLTANEALDHPFF 396

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0045727 "positive regulation of translation" evidence=RCA

UNIPROTKB|E1B9Q2 CLK2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
 Identities = 157/331 (47%), Positives = 222/331 (67%)

Query:    46 KIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG- 103
             +I S +GEGTFG+V++C D  R    VA+KI++ ++KY+EAA +EI VL+++ + D    
Sbjct:   164 EIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNK 223

Query:   104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +PI  VR +A QL + + F+HD
Sbjct:   224 NLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHD 283

Query:   164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
               + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T++ 
Sbjct:   284 NKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSATFDH 335

Query:   224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
                + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAMMER
Sbjct:   336 EHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMER 395

Query:   284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
             +LGP+P  M+++  +  +KY  RGRLDW E  ++   ++   K P  + L  +  +H   
Sbjct:   396 ILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRENCK-PLRRYLTSEAEEHH-- 450

Query:   344 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
              L  L++ +L Y+P  RLT  EAL+HPFF R
Sbjct:   451 QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045721 "negative regulation of gluconeogenesis" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1P919 CLK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
 Identities = 157/331 (47%), Positives = 222/331 (67%)

Query:    46 KIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG- 103
             +I S +GEGTFG+V++C D  R    VA+KI++ ++KY+EAA +EI VL+++ + D    
Sbjct:   276 EIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNK 335

Query:   104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +PI  VR +A QL + + F+HD
Sbjct:   336 NLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHD 395

Query:   164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
               + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T++ 
Sbjct:   396 NKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSATFDH 447

Query:   224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
                + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAMMER
Sbjct:   448 EHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMER 507

Query:   284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
             +LGP+P  M+++  +  +KY  RGRLDW E  ++   ++   K P  + L  +  +H   
Sbjct:   508 ILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRENCK-PLRRYLTSEAEEHH-- 562

Query:   344 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
              L  L++ +L Y+P  RLT  EAL+HPFF R
Sbjct:   563 QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 593

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|B1AVT0 CLK2 "Dual-specificity protein kinase CLK2" [Homo sapiens (taxid:9606)]

 Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
 Identities = 157/331 (47%), Positives = 222/331 (67%)

Query:    46 KIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG- 103
             +I S +GEGTFG+V++C D  R    VA+KI++ ++KY+EAA +EI VL+++ + D    
Sbjct:   162 EIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNK 221

Query:   104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +PI  VR +A QL + + F+HD
Sbjct:   222 NLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHD 281

Query:   164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
               + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T++ 
Sbjct:   282 NKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSATFDH 333

Query:   224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
                + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAMMER
Sbjct:   334 EHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMER 393

Query:   284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
             +LGP+P  M+++  +  +KY  RGRLDW E  ++   ++   K P  + L  +  +H   
Sbjct:   394 ILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRENCK-PLRRYLTSEAEEHH-- 448

Query:   344 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
              L  L++ +L Y+P  RLT  EAL+HPFF R
Sbjct:   449 QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 479

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|P49760 CLK2 "Dual specificity protein kinase CLK2" [Homo sapiens (taxid:9606)]

 Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
 Identities = 157/331 (47%), Positives = 222/331 (67%)

Query:    46 KIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG- 103
             +I S +GEGTFG+V++C D  R    VA+KI++ ++KY+EAA +EI VL+++ + D    
Sbjct:   164 EIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNK 223

Query:   104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +PI  VR +A QL + + F+HD
Sbjct:   224 NLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHD 283

Query:   164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
               + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T++ 
Sbjct:   284 NKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSATFDH 335

Query:   224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
                + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAMMER
Sbjct:   336 EHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMER 395

Query:   284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
             +LGP+P  M+++  +  +KY  RGRLDW E  ++   ++   K P  + L  +  +H   
Sbjct:   396 ILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRENCK-PLRRYLTSEAEEHH-- 450

Query:   344 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
              L  L++ +L Y+P  RLT  EAL+HPFF R
Sbjct:   451 QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

GO:0005524 "ATP binding" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IDA

GO:0010212 "response to ionizing radiation" evidence=IMP

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0045721 "negative regulation of gluconeogenesis" evidence=ISS

GO:0046777 "protein autophosphorylation" evidence=ISS

UNIPROTKB|F1RLJ5 CLK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
 Identities = 157/331 (47%), Positives = 222/331 (67%)

Query:    46 KIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG- 103
             +I S +GEGTFG+V++C D  R    VA+KI++ ++KY+EAA +EI VL+++ + D    
Sbjct:   164 EIISTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNK 223

Query:   104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +PI  VR +A QL + + F+HD
Sbjct:   224 NLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHD 283

Query:   164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
               + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T++ 
Sbjct:   284 NKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSATFDH 335

Query:   224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
                + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAMMER
Sbjct:   336 EHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMER 395

Query:   284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
             +LGP+P  M+++  +  +KY  RGRLDW E  ++   ++   K P  + L  +  +H   
Sbjct:   396 ILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRENCK-PLRRYLTSEAEEHH-- 450

Query:   344 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
              L  L++ +L Y+P  RLT  EAL+HPFF R
Sbjct:   451 QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045721 "negative regulation of gluconeogenesis" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

MGI|MGI:1098669 Clk2 "CDC-like kinase 2" [Mus musculus (taxid:10090)]

 Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
 Identities = 157/329 (47%), Positives = 221/329 (67%)

Query:    46 KIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG- 103
             +I S +GEGTFG+V++C D  R    VA+KI++ ++KY+EAA +EI VL+++ + D    
Sbjct:   163 EIVSTLGEGTFGRVVQCVDHRRGGTQVALKIIKNVEKYKEAARLEINVLEKINEKDPDNK 222

Query:   104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +PI  VR +A QL + + F+HD
Sbjct:   223 NLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHD 282

Query:   164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
               + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T++ 
Sbjct:   283 NKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSATFDH 334

Query:   224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
                + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAMMER
Sbjct:   335 EHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMER 394

Query:   284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
             +LGP+P  M+++  +  +KY  RGRLDW E  ++   ++   K P  + L  +  DH   
Sbjct:   395 ILGPVPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRENCK-PLRRYLTSEAEDHH-- 449

Query:   344 DLTHLLQGLLRYDPTDRLTAREALRHPFF 372
              L  L++ +L Y+P  RLT  EAL+HPFF
Sbjct:   450 QLFDLIENMLEYEPAKRLTLGEALQHPFF 478

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;IDA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;IDA

GO:0010212 "response to ionizing radiation" evidence=ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IDA

GO:0032526 "response to retinoic acid" evidence=IDA

GO:0042221 "response to chemical stimulus" evidence=IDA

GO:0043484 "regulation of RNA splicing" evidence=ISO

GO:0045721 "negative regulation of gluconeogenesis" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

RGD|1359711 Clk2 "CDC-like kinase 2" [Rattus norvegicus (taxid:10116)]

 Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
 Identities = 157/329 (47%), Positives = 221/329 (67%)

Query:    46 KIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG- 103
             +I S +GEGTFG+V++C D  R    VA+KI++ ++KY+EAA +EI VL+++ + D    
Sbjct:   164 EIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNK 223

Query:   104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +PI  VR +A QL + + F+HD
Sbjct:   224 NLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHD 283

Query:   164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
               + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T++ 
Sbjct:   284 NKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSATFDH 335

Query:   224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
                + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAMMER
Sbjct:   336 EHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMER 395

Query:   284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
             +LGP+P  M+++  +  +KY  RGRLDW E  ++   ++   K P  + L  +  DH   
Sbjct:   396 ILGPVPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRENCK-PLRRYLTSEAEDHH-- 450

Query:   344 DLTHLLQGLLRYDPTDRLTAREALRHPFF 372
              L  L++ +L Y+P  RLT  EAL+HPFF
Sbjct:   451 QLFDLIENMLEYEPAKRLTLGEALQHPFF 479

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0004713 "protein tyrosine kinase activity" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0010212 "response to ionizing radiation" evidence=ISO

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=ISO

GO:0032526 "response to retinoic acid" evidence=ISO

GO:0042221 "response to chemical stimulus" evidence=ISO

GO:0043484 "regulation of RNA splicing" evidence=ISO

GO:0045721 "negative regulation of gluconeogenesis" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P51567	AFC2_ARATH	2, ., 7, ., 1, 2, ., 1	0.8510	0.8627	0.7658	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.12.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.12	0.976
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_XV0599 hypothetical protein (428 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	379
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-70
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	4e-64
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-57
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	7e-54
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	4e-49
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	5e-48
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-45
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	3e-43
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-42
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-37
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	7e-37
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-35
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-35
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-35
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	4e-35
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-34
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	3e-34
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	5e-34
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	5e-33
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	7e-32
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	8e-32
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	4e-31
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	1e-30
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-30
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-30
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	8e-30
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	8e-30
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	6e-29
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-28
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-28
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	8e-28
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	2e-27
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	3e-27
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	8e-27
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	9e-27
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-26
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	2e-26
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	3e-26
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	3e-25
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	7e-25
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	1e-24
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	1e-24
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	2e-24
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-24
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	2e-24
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	5e-24
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-23
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	1e-23
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-23
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-23
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	4e-23
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	4e-23
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-22
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-22
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-22
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-22
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	5e-22
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	7e-22
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	2e-21
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	5e-21
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	7e-21
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-20
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-20
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	1e-19
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	2e-19
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	3e-19
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	7e-19
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	2e-18
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	3e-18
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	5e-18
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-17
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-17
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-17
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	5e-17
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	7e-17
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	2e-16
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	5e-16
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	7e-16
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	9e-16
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	2e-15
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	3e-15
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	4e-15
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	6e-15
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	7e-15
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	8e-15
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-14
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-14
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-14
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-14
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	4e-14
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	4e-14
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	4e-14
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	5e-14
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	7e-14
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	7e-14
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	9e-14
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-13
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-13
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-13
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	1e-13
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-13
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-13
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	3e-13
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-13
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	4e-13
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	5e-13
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	7e-13
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-12
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-12
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	1e-12
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-12
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-12
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	2e-12
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	3e-12
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	3e-12
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	3e-12
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	4e-12
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	5e-12
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	8e-12
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	9e-12
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-11
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	1e-11
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-11
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	1e-11
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	1e-11
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	2e-11
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	2e-11
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-11
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	2e-11
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	3e-11
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	3e-11
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	3e-11
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	3e-11
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	4e-11
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-11
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	6e-11
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	7e-11
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	8e-11
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-10
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-10
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	2e-10
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	2e-10
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	3e-10
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	4e-10
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	4e-10
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	6e-10
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	7e-10
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	7e-10
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	8e-10
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	8e-10
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	9e-10
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	9e-10
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	9e-10
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-09
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	1e-09
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	1e-09
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	1e-09
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	1e-09
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-09
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-09
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	3e-09
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	4e-09
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	4e-09
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	6e-09
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	6e-09
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	6e-09
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	7e-09
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	9e-09
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	1e-08
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-08
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	2e-08
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	3e-08
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	3e-08
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	3e-08
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	3e-08
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	4e-08
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	4e-08
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	5e-08
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	5e-08
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	5e-08
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	5e-08
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	7e-08
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	9e-08
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	9e-08
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	1e-07
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	1e-07
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-07
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-07
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-07
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	2e-07
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	2e-07
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	2e-07
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-07
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	3e-07
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	4e-07
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	4e-07
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	4e-07
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	4e-07
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	5e-07
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	5e-07
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	6e-07
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	6e-07
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	9e-07
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	1e-06
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	2e-06
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	2e-06
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-06
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	2e-06
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	2e-06
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	3e-06
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	3e-06
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	3e-06
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	4e-06
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	5e-06
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	5e-06
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	7e-06
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	7e-06
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	1e-05
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	1e-05
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	1e-05
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-05
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-05
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	2e-05
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-05
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	3e-05
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	3e-05
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	5e-05
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	5e-05
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	8e-05
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	1e-04
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	2e-04
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-04
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-04
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	2e-04
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	3e-04
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	3e-04
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	4e-04
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	4e-04
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	5e-04
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	5e-04
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	5e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	9e-04
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	0.001
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	0.001
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	0.001
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	0.001
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	0.002
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	0.003
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	0.003
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	0.003

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  221 bits (565), Expect = 1e-70
 Identities = 98/332 (29%), Positives = 147/332 (44%), Gaps = 84/332 (25%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGG 103
           +I  K+GEG+FG+V    D++  ++VAIK+++   IKK RE  + EI++L++L KH    
Sbjct: 2   EILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKL-KHPN-- 58

Query: 104 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
              V++ + F+  + + +V E   G  L+D L+K        D  R   RQ+L  + ++H
Sbjct: 59  --IVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKR--GRLSEDEARFYLRQILSALEYLH 114

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              ++H DLKPEN+LL    +                           +K+ DFG     
Sbjct: 115 SKGIVHRDLKPENILLDEDGH---------------------------VKLADFGLARQL 147

Query: 223 RPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
            P +     V T  Y APEV+LG G+    DIWS+G IL EL TG+  F   + L    +
Sbjct: 148 DPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLL--EL 205

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
            +++  P P                      PE   S E+                    
Sbjct: 206 FKKIGKPKPP------------------FPPPEWDISPEAK------------------- 228

Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                  L++ LL  DP  RLTA EAL+HPFF
Sbjct: 229 ------DLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score =  211 bits (538), Expect = 4e-64
 Identities = 122/334 (36%), Positives = 184/334 (55%), Gaps = 33/334 (9%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN- 104
           KI S +GEGTFG+V+E WDR+RKE  A+KIVR + KY   A IEI+ ++++ + D     
Sbjct: 132 KILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRF 191

Query: 105 RCVQIRNWF-DYRNHICIVFEKLGSSLYDFLRKN---NYRSFPIDLVREIARQLLECIAF 160
             ++I+ +F +   H+CIV  K G  L D++ K+   ++R        +I  Q    + +
Sbjct: 192 PLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLA-----QIIFQTGVALDY 246

Query: 161 MH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            H +L ++HTDLKPEN+L+ +S+   V D  ++   P         P    +++ D G  
Sbjct: 247 FHTELHLMHTDLKPENILMETSD--TVVDPVTNRALP---------PDPCRVRICDLGGC 295

Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
             ER  +  IVSTRHYR+PEV+LGLGW Y  D+WS+GCI+ EL TG+ L+ TH+NLEHL 
Sbjct: 296 CDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLH 355

Query: 280 MMERVLGPLPQHMLKRVDRHAEK--YVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 337
           +ME+ LG LP     R      +  Y   G+L         + +  + +   ++ +I   
Sbjct: 356 LMEKTLGRLPSEWAGRCGTEEARLLYNSAGQL---RPCTDPKHLARIARARPVREVIRDD 412

Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
           +      L  L+ GLL YD   RL AR+   HP+
Sbjct: 413 L------LCDLIYGLLHYDRQKRLNARQMTTHPY 440

Length = 467

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  187 bits (476), Expect = 3e-57
 Identities = 88/335 (26%), Positives = 146/335 (43%), Gaps = 84/335 (25%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKG 102
           ++  K+G G+FG V +   +   ++VA+KI++      K  + A  EI +L++L  H   
Sbjct: 2   ELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRL-SHPNI 60

Query: 103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
               V++ + F+ ++H+ +V E   G  L+D+L +        D  ++IA Q+L  + ++
Sbjct: 61  ----VRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGG--PLSEDEAKKIALQILRGLEYL 114

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 220
           H   +IH DLKPEN+LL  +  +K+                            DFG +  
Sbjct: 115 HSNGIIHRDLKPENILLDENGVVKI---------------------------ADFGLAKK 147

Query: 221 YERPDQNY--IVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
             +   +    V T  Y APEV+L G G+    D+WS+G IL EL TG+  F     L+ 
Sbjct: 148 LLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQ 207

Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 337
           L ++ R+LGP                      D P+ ++  E                  
Sbjct: 208 LQLIRRILGPPL------------------EFDEPKWSSGSE------------------ 231

Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                 +   L++  L  DP+ R TA E L+HP+F
Sbjct: 232 ------EAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  179 bits (456), Expect = 7e-54
 Identities = 103/339 (30%), Positives = 160/339 (47%), Gaps = 69/339 (20%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR--EAAMI--EIEVLQQLAKHDK 101
           K+  ++G+GTFG V    ++E  E+VAIK  +  KK+   E  M   E++ L++L +H  
Sbjct: 2   KVIKQLGDGTFGSVYLARNKETGELVAIK--KMKKKFYSWEECMNLREVKSLRKLNEHPN 59

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
                V+++  F   + +  VFE +  +LY  ++    + F   ++R I  Q+L+ +A +
Sbjct: 60  ----IVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHI 115

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--ST 219
           H     H DLKPEN LLVS   +                          +K+ DFG    
Sbjct: 116 HKHGFFHRDLKPEN-LLVSGPEV--------------------------VKIADFGLARE 148

Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLEH 277
              RP     VSTR YRAPE++L     Y  P DIW++GCI+ EL T   LF     ++ 
Sbjct: 149 IRSRPPYTDYVSTRWYRAPEILLRSTS-YSSPVDIWALGCIMAELYTLRPLFPGSSEIDQ 207

Query: 278 LAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGA--ASRESIKSVMKLPRL-QNL 333
           L  +  VLG P  Q                   DWPEG   AS+       + P+     
Sbjct: 208 LYKICSVLGTPTKQ-------------------DWPEGYKLASKLGF----RFPQFAPTS 244

Query: 334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           + Q + +++ +   L++ +LR+DP  R TA +AL+HP+F
Sbjct: 245 LHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  166 bits (424), Expect = 4e-49
 Identities = 96/345 (27%), Positives = 155/345 (44%), Gaps = 90/345 (26%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAKHDKGG 103
           K+GEGT+G V +  D++  E+VA+K +R      GI      A+ EI +L++L KH    
Sbjct: 6   KLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPS---TALREISLLKEL-KHP--- 58

Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
           N  V++ +       + +VFE     L  +L          +L++ I  QLL  +A+ H 
Sbjct: 59  N-IVKLLDVIHTERKLYLVFEYCDMDLKKYL-DKRPGPLSPNLIKSIMYQLLRGLAYCHS 116

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYE 222
             ++H DLKP+N +L++ + +                          +K+ DFG +  + 
Sbjct: 117 HRILHRDLKPQN-ILINRDGV--------------------------LKLADFGLARAFG 149

Query: 223 RPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
            P + Y   V T  YRAPE++LG   ++   DIWSVGCI  E+ TG+ LF     ++ L 
Sbjct: 150 IPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLF 209

Query: 280 MMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH- 337
            + ++LG P  +                    WP           V KLP  +    +  
Sbjct: 210 KIFQILGTPTEE-------------------SWPG----------VTKLPDYKPTFPKFP 240

Query: 338 ----------VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                     +D    D   LL  +L+Y+P  R++A+EAL+HP+F
Sbjct: 241 PKDLEKVLPRLDPEGID---LLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score =  164 bits (416), Expect = 5e-48
 Identities = 99/332 (29%), Positives = 160/332 (48%), Gaps = 58/332 (17%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
             +GEG +G VL+C ++   E+VAIK        +  ++ A+ E++VL+QL +H+     
Sbjct: 7   GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL-RHEN---- 61

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            V ++  F  +  + +VFE +  +L + L  +     P D VR    QLL+ IA+ H   
Sbjct: 62  IVNLKEAFRRKGRLYLVFEYVERTLLELLEASPG-GLPPDAVRSYIWQLLQAIAYCHSHN 120

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY--ER 223
           +IH D+KPEN +LVS                          +S  +K+ DFG       R
Sbjct: 121 IIHRDIKPEN-ILVS--------------------------ESGVLKLCDFGFARALRAR 153

Query: 224 PDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
           P       V+TR YRAPE+++G   +  P D+W++GCI+ EL  GE LF    +++ L +
Sbjct: 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYL 213

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
           +++ LGPLP    +    +     R   + +PE  +  ES++      R    +      
Sbjct: 214 IQKCLGPLPPSHQELFSSNP----RFAGVAFPE-PSQPESLER-----RYPGKV------ 257

Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
            +      L+  LR DP +RLT  E L+HP+F
Sbjct: 258 -SSPALDFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  156 bits (397), Expect = 3e-45
 Identities = 99/339 (29%), Positives = 151/339 (44%), Gaps = 75/339 (22%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAKHDKG 102
            K+GEGT+G V +  D+   E+VAIK ++      GI K    A+ EI++L++L  H   
Sbjct: 5   GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPK---TALREIKLLKEL-NHPN- 59

Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
               +++ + F ++  + +VFE + + LY  ++    R  P  L++    QLL+ +AF H
Sbjct: 60  ---IIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCH 115

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              ++H DLKPEN+L+                                +K+ DFG     
Sbjct: 116 SHGILHRDLKPENLLI---------------------------NTEGVLKLADFGLARSF 148

Query: 223 RPDQNYI---VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
                     V TR YRAPE++LG  G++ P DIWSVGCI  EL +   LF     ++ L
Sbjct: 149 GSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQL 208

Query: 279 AMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGA----ASRESIKSVMKLPRLQNL 333
             + R LG P P+                    WP+        + S      +P     
Sbjct: 209 FKIFRTLGTPDPEV-------------------WPKFTSLARNYKFSFPKKAGMP--LPK 247

Query: 334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           +  +    A D   LL  +L YDP  R+TA +AL HP+F
Sbjct: 248 LFPNASPQALD---LLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  151 bits (383), Expect = 3e-43
 Identities = 98/344 (28%), Positives = 151/344 (43%), Gaps = 76/344 (22%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           KI  ++GEG  G V +  DRE  E VA+K   + R        A+ EI+ LQ   +H   
Sbjct: 3   KILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC-QHP-- 59

Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
               V++ + F + +   +V E + S L + LR +  R  P   V+   R LL+ +A+MH
Sbjct: 60  --YVVKLLDVFPHGSGFVLVMEYMPSDLSEVLR-DEERPLPEAQVKSYMRMLLKGVAYMH 116

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
              ++H DLKP N+L+ +   +K+ D+  +      +   Y  +                
Sbjct: 117 ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQ---------------- 160

Query: 221 YERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
                    V+TR YRAPE++ G   +    D+W+VGCI  EL  G  LF    ++E LA
Sbjct: 161 ---------VATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLA 211

Query: 280 MMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM--- 335
           ++ R LG P  +                    WP           +  LP    +     
Sbjct: 212 IVFRTLGTPNEE-------------------TWPG----------LTSLPDYNKITFPES 242

Query: 336 ------QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                 +    ++ +   LL+GLL YDP+ RL+A EALRHP+FT
Sbjct: 243 KPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  147 bits (373), Expect = 1e-42
 Identities = 73/218 (33%), Positives = 106/218 (48%), Gaps = 39/218 (17%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           GEG FG V    D++  + VAIKI++        E  + EIE+L++L  H       V++
Sbjct: 2   GEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKL-NHP----NIVKL 56

Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
              F+  NH+ +V E   G SL D L++N  +    D +  I  Q+LE + ++H   +IH
Sbjct: 57  YGVFEDENHLYLVMEYCEGGSLKDLLKENEGK-LSEDEILRILLQILEGLEYLHSNGIIH 115

Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DLKPEN+LL S                              +K+ DFG +     D++ 
Sbjct: 116 RDLKPENILLDSDNGK--------------------------VKLADFGLSKLLTSDKSL 149

Query: 229 ---IVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVEL 262
              IV T  Y APEV+LG G ++   DIWS+G IL EL
Sbjct: 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score =  135 bits (343), Expect = 2e-37
 Identities = 100/342 (29%), Positives = 169/342 (49%), Gaps = 73/342 (21%)

Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIK---------IVRGIKKYREAAMIEIEVLQQ 95
           +K+ SK+GEG++G V +C +RE  ++VAIK         +++ I      A+ EI +L+Q
Sbjct: 4   EKL-SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKI------ALREIRMLKQ 56

Query: 96  LAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           L KH       V +   F  +  + +VFE    ++ + L KN  R  P  L+++I  Q L
Sbjct: 57  L-KH----PNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTL 110

Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
           + + F H    IH D+KPEN+L+                            K   IK+ D
Sbjct: 111 QAVNFCHKHNCIHRDVKPENILIT---------------------------KQGQIKLCD 143

Query: 216 FG-STTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQT 271
           FG +     P  +Y   V+TR YRAPE+++G   +  P D+W++GC+  EL TG+ L+  
Sbjct: 144 FGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPG 203

Query: 272 HENLEHLAMMERVLGPL-PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL 330
             +++ L ++ + LG L P+H  +++     ++ +   +  PE   +RE ++   K P +
Sbjct: 204 KSDVDQLYLIRKTLGDLIPRH--QQIFS-TNQFFKGLSIPEPE---TREPLE--SKFPNI 255

Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
            +  +             L+G L+ DPT+RL+  E L HP+F
Sbjct: 256 SSPALS-----------FLKGCLQMDPTERLSCEELLEHPYF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score =  134 bits (340), Expect = 7e-37
 Identities = 89/336 (26%), Positives = 143/336 (42%), Gaps = 71/336 (21%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMI-EIEVLQQLAKHDKGGN 104
           GEG +G V +  D      VA+K VR      GI      + + EI +L+QL   +    
Sbjct: 8   GEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIP----LSTLREIALLKQLESFEH--P 61

Query: 105 RCVQIR----NWFDYRN-HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
             V++          R   + +VFE +   L  +L K      P + ++++ RQLL  + 
Sbjct: 62  NIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVD 121

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS- 218
           F+H   ++H DLKP+N+L+ S   +K+ D+  +                   ++  F   
Sbjct: 122 FLHSHRIVHRDLKPQNILVTSDGQVKIADFGLA-------------------RIYSFEMA 162

Query: 219 -TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
            T+        +V T  YRAPEV+L   +  P D+WSVGCI  EL     LF+     + 
Sbjct: 163 LTS--------VVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQ 214

Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRLQNLIMQ 336
           L  +  V+G   +                   +WP   +  R S  S    PR     + 
Sbjct: 215 LDKIFDVIGLPSEE------------------EWPRNVSLPRSSFPS--YTPRSFKSFVP 254

Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
            +     D   LL+ +L ++P  R++A EAL+HP+F
Sbjct: 255 EICEEGLD---LLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =  131 bits (332), Expect = 1e-35
 Identities = 88/336 (26%), Positives = 150/336 (44%), Gaps = 66/336 (19%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA------AMIEIEVLQQLAKHDKG 102
            K+GEGT+  V +  D+E   +VAIK ++  ++          A+ EI++LQ+L KH   
Sbjct: 6   KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-KHPN- 63

Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
               + + + F ++++I +VFE + + L   ++  +    P D ++      L  + ++H
Sbjct: 64  ---IIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPAD-IKSYMLMTLRGLEYLH 119

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTY 221
              ++H DLKP N LL++S+ +                          +K+ DFG + ++
Sbjct: 120 SNWILHRDLKPNN-LLIASDGV--------------------------LKLADFGLARSF 152

Query: 222 ERPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
             P++     V TR YRAPE++ G   +    D+WSVGCI  EL           +++ L
Sbjct: 153 GSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQL 212

Query: 279 AMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 337
             +   LG P  +                   +WP G  S          P     + Q 
Sbjct: 213 GKIFEALGTPTEE-------------------NWP-GVTSLPDYVEFKPFPPTP--LKQI 250

Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
              ++ D   LLQ LL  +P  R+TAR+AL HP+F+
Sbjct: 251 FPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score =  130 bits (330), Expect = 2e-35
 Identities = 100/335 (29%), Positives = 153/335 (45%), Gaps = 62/335 (18%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHDK 101
           KI  K+GEGTF +VL+   R+  +  AIK     K ++    +    EI+ L++L+ H  
Sbjct: 2   KILGKIGEGTFSEVLKAQSRKTGKYYAIK--CMKKHFKSLEQVNNLREIQALRRLSPH-- 57

Query: 102 GGNRCVQIRNWFDYR-NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
             N    I   FD +   + +VFE +  +LY+ + K   R  P   V+    QLL+ +  
Sbjct: 58  -PNILRLIEVLFDRKTGRLALVFELMDMNLYELI-KGRKRPLPEKRVKSYMYQLLKSLDH 115

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS-- 218
           MH   + H D+KPEN+L+                            K   +K+ DFGS  
Sbjct: 116 MHRNGIFHRDIKPENILI----------------------------KDDILKLADFGSCR 147

Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
             Y +P     +STR YRAPE +L  G +    DIW+VGC+  E+ +   LF     L+ 
Sbjct: 148 GIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ 207

Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 337
           +A +  VLG     +LK+  +           ++P         K    L +L    + +
Sbjct: 208 IAKIHDVLGTPDAEVLKKFRKSRHM-----NYNFPS--------KKGTGLRKL----LPN 250

Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                 D   LL+ LL YDP +R+TA++ALRHP+F
Sbjct: 251 ASAEGLD---LLKKLLAYDPDERITAKQALRHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  130 bits (329), Expect = 3e-35
 Identities = 95/358 (26%), Positives = 149/358 (41%), Gaps = 102/358 (28%)

Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLAKHD 100
           +KI  ++GEGT+GQV +  +++  E+VA+K +R ++  +E     A+ EI++LQ+L +H 
Sbjct: 2   EKIA-QIGEGTYGQVYKARNKKTGELVALKKIR-MENEKEGFPITAIREIKLLQKL-RHP 58

Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLY--------DF---LRKNNYRSFPIDLVRE 149
                 V++           IV  K   S+Y        D    L     + F    ++ 
Sbjct: 59  N----IVRL---------KEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVK-FTESQIKC 104

Query: 150 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 209
             +QLLE + ++H   ++H D+K  N+L+         +    L                
Sbjct: 105 YMKQLLEGLQYLHSNGILHRDIKGSNILI---------NNDGVL---------------- 139

Query: 210 AIKVIDFG-STTYE---RPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCT 264
             K+ DFG +  Y      D    V T  YR PE++LG   +    D+WSVGCIL EL  
Sbjct: 140 --KLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFL 197

Query: 265 GEALFQTHENLEHLAMMERVLGP----------LPQHMLKRVDRHAEKYVRRGRLDWPEG 314
           G+ +FQ    LE L  +  + G                     +  + Y RR        
Sbjct: 198 GKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWF--ENLKPKKPYKRR-------- 247

Query: 315 AASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
              RE  K ++             D SA D   LL  LL  DP  R++A +AL+H +F
Sbjct: 248 --LREFFKHLI-------------DPSALD---LLDKLLTLDPKKRISADQALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score =  130 bits (327), Expect = 4e-35
 Identities = 94/327 (28%), Positives = 158/327 (48%), Gaps = 53/327 (16%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           +GEG +G VL+C  +E KE+VAIK  +     ++ +E  + E+++L+ L + +      V
Sbjct: 9   VGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQEN-----IV 63

Query: 108 QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +++  F  R  + +VFE +  ++ + L +      P + VR    QL++ I + H   ++
Sbjct: 64  ELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPP-EKVRSYIYQLIKAIHWCHKNDIV 122

Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H D+KPEN+L+  ++ +K+ D+                          F     E  + N
Sbjct: 123 HRDIKPENLLISHNDVLKLCDF-------------------------GFARNLSEGSNAN 157

Query: 228 YI--VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           Y   V+TR YR+PE++LG  +    D+WSVGCIL EL  G+ LF     ++ L  +++VL
Sbjct: 158 YTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVL 217

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
           GPLP   +K    +     R   L +P       ++     L R    I+       G L
Sbjct: 218 GPLPAEQMKLFYSNP----RFHGLRFP-------AVNHPQSLERRYLGILS------GVL 260

Query: 346 THLLQGLLRYDPTDRLTAREALRHPFF 372
             L++ LL+ +PTDR    + L HP F
Sbjct: 261 LDLMKNLLKLNPTDRYLTEQCLNHPAF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  129 bits (327), Expect = 2e-34
 Identities = 94/353 (26%), Positives = 151/353 (42%), Gaps = 81/353 (22%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMI--EIEVLQQLAKHDKG 102
           ++   +G G +G V    D+     VAIK I        +A  I  EI++L+ L +H+  
Sbjct: 3   ELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHL-RHE-- 59

Query: 103 GNRCVQIRNWF-----DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR----Q 153
            N  + + +       +  N + IV E + + L+  ++       P  L  +  +    Q
Sbjct: 60  -N-IIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKS------PQPLTDDHIQYFLYQ 111

Query: 154 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 213
           +L  + ++H   +IH DLKP N+L+ S+                             +K+
Sbjct: 112 ILRGLKYLHSANVIHRDLKPSNILVNSN---------------------------CDLKI 144

Query: 214 IDFG----STTYERPDQN---YIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTG 265
            DFG        E        Y+V TR YRAPE++L    +T   DIWSVGCI  EL T 
Sbjct: 145 CDFGLARGVDPDEDEKGFLTEYVV-TRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTR 203

Query: 266 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM 325
           + LF   + ++ L ++  VLG   +  LK +                    +R  +KS+ 
Sbjct: 204 KPLFPGRDYIDQLNLIVEVLGTPSEEDLKFI----------------TSEKARNYLKSLP 247

Query: 326 KLPRLQNL--IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
           K P+ + L  +       A D   LL+ +L +DP  R+TA EAL HP+  + H
Sbjct: 248 KKPK-KPLSKLFPGASPEAID---LLEKMLVFDPKKRITADEALAHPYLAQLH 296

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score =  128 bits (323), Expect = 3e-34
 Identities = 93/353 (26%), Positives = 143/353 (40%), Gaps = 94/353 (26%)

Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHD 100
           +K++ ++GEGT+G V    D    E+VA+K VR +   R+   I    EI +L  L +H 
Sbjct: 10  EKLN-RIGEGTYGIVYRARDTTSGEIVALKKVR-MDNERDGIPISSLREITLLLNL-RHP 66

Query: 101 KGGNRCVQIRNWF--DYRNHICIVFE----KLGSSLYDFLRKNNYRSFPIDLVREIARQL 154
                 V+++      + + I +V E     L S L      N    F    V+ +  QL
Sbjct: 67  N----IVELKEVVVGKHLDSIFLVMEYCEQDLASLLD-----NMPTPFSESQVKCLMLQL 117

Query: 155 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
           L  + ++H+  +IH DLK  N+L                           +     +K+ 
Sbjct: 118 LRGLQYLHENFIIHRDLKVSNLL---------------------------LTDKGCLKIA 150

Query: 215 DFG-STTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQ 270
           DFG + TY  P +     V T  YRAPE++LG   +T   D+W+VGCIL EL   + L  
Sbjct: 151 DFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLP 210

Query: 271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL 330
               +E L ++ ++LG   + +                  WP              LP +
Sbjct: 211 GKSEIEQLDLIIQLLGTPNESI------------------WP----------GFSDLPLV 242

Query: 331 QNLIMQHVDHSAGDLTH-----------LLQGLLRYDPTDRLTAREALRHPFF 372
               +    ++  +L H           LL  LL YDP  R TA EAL   +F
Sbjct: 243 GKFTLPKQPYN--NLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF 293

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score =  128 bits (324), Expect = 5e-34
 Identities = 102/350 (29%), Positives = 151/350 (43%), Gaps = 76/350 (21%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--------KKYREAAMIEIEVLQQLA 97
           +I  K+G+G +G V +  DR  KE+VA+K +           + +RE     I  LQ+L 
Sbjct: 10  EILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFRE-----IMFLQELG 64

Query: 98  KHDKGGNRCVQIRNWFDYRNH--ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
            H       V++ N     N   I +VFE + + L+  +R N          R I  QLL
Sbjct: 65  DHPN----IVKLLNVIKAENDKDIYLVFEYMETDLHAVIRANILED---VHKRYIMYQLL 117

Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
           + + ++H   +IH DLKP N+LL                   +S           +K+ D
Sbjct: 118 KALKYIHSGNVIHRDLKPSNILL-------------------NSDCR--------VKLAD 150

Query: 216 FG--------STTYERPDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
           FG            E P     V+TR YRAPE++LG    T   D+WSVGCIL E+  G+
Sbjct: 151 FGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGK 210

Query: 267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 326
            LF     L  L  +  V+GP     ++ +               P  A   +S+ S  +
Sbjct: 211 PLFPGTSTLNQLEKIIEVIGPPSAEDIESIKS-------------PFAATMLDSLPSRPR 257

Query: 327 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
            P  +  ++      A D   LL+ LL ++P  RLTA EAL HP+  + H
Sbjct: 258 KPLDE--LLPKASDDALD---LLKKLLVFNPNKRLTAEEALEHPYVAQFH 302

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score =  124 bits (313), Expect = 5e-33
 Identities = 100/335 (29%), Positives = 156/335 (46%), Gaps = 69/335 (20%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAKHDKGG 103
           K+GEGT+G V +  ++   E+VA+K +R      G+      A+ EI +L++L  H    
Sbjct: 7   KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKEL-NHPN-- 60

Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
              V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H 
Sbjct: 61  --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS 118

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYE 222
             ++H DLKP+N LL+++E                           AIK+ DFG +  + 
Sbjct: 119 HRVLHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFG 151

Query: 223 RPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
            P + Y   V T  YRAPE++LG   ++   DIWS+GCI  E+ T  ALF     ++ L 
Sbjct: 152 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 211

Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL--IMQH 337
            + R LG  P  ++                 WP   +  +   S  K  R Q+   ++  
Sbjct: 212 RIFRTLGT-PDEVV-----------------WPGVTSLPDYKPSFPKWAR-QDFSKVVPP 252

Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           +D    D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 253 LDEDGRD---LLSQMLHYDPNKRISAKAALAHPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score =  121 bits (306), Expect = 7e-32
 Identities = 90/338 (26%), Positives = 149/338 (44%), Gaps = 69/338 (20%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHDKGGN 104
           +++ EGT+G V    D++  E+VA+K ++ ++K +E     ++ EI +L +L +H     
Sbjct: 11  NRIEEGTYGVVYRARDKKTGEIVALKKLK-MEKEKEGFPITSLREINILLKL-QHPN--- 65

Query: 105 RCVQIRNWF--DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             V ++        + I +V E +   L   + +   + F    V+ +  QLL  +A +H
Sbjct: 66  -IVTVKEVVVGSNLDKIYMVMEYVEHDLKSLM-ETMKQPFLQSEVKCLMLQLLSGVAHLH 123

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTY 221
           D  ++H DLK  N+L                           +     +K+ DFG +  Y
Sbjct: 124 DNWILHRDLKTSNLL---------------------------LNNRGILKICDFGLAREY 156

Query: 222 ERPDQNY--IVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
             P + Y  +V T  YRAPE++LG   ++   D+WSVGCI  EL T + LF     ++ L
Sbjct: 157 GSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQL 216

Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
             + ++LG  P           EK        WP G +     K         N + +  
Sbjct: 217 NKIFKLLG-TPT----------EK-------IWP-GFSELPGAKKKTFTKYPYNQLRKKF 257

Query: 339 DHSAGDLTH----LLQGLLRYDPTDRLTAREALRHPFF 372
                 L+     LL  LL YDP  R++A +AL+HP+F
Sbjct: 258 PA--LSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score =  121 bits (304), Expect = 8e-32
 Identities = 89/328 (27%), Positives = 150/328 (45%), Gaps = 55/328 (16%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           K+GEGT+  V +  +R   E+VA+K +     +     A+ EI ++++L KH+      V
Sbjct: 7   KLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKEL-KHEN----IV 61

Query: 108 QIRNWFDYRNHICIVFEKLGSSLYDFLRKN-NYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++ +     N + +VFE +   L  ++  +    +   + V+    QLL+ IAF H+  +
Sbjct: 62  RLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRV 121

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP+N+L+     +K+ D+               + ++  I V  F +        
Sbjct: 122 LHRDLKPQNLLINKRGELKLADFG--------------LARAFGIPVNTFSNE------- 160

Query: 227 NYIVSTRHYRAPEVILGLGWTYPC--DIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
              V T  YRAP+V+LG   TY    DIWSVGCI+ E+ TG  LF    N + L  + R+
Sbjct: 161 ---VVTLWYRAPDVLLG-SRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRI 216

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
           +G   +     + +  E      +  +P                 LQ L      H+   
Sbjct: 217 MGTPTESTWPGISQLPEY-----KPTFPRYPPQ-----------DLQQLF----PHADPL 256

Query: 345 LTHLLQGLLRYDPTDRLTAREALRHPFF 372
              LL  LL+ +P  R++A +AL+HP+F
Sbjct: 257 GIDLLHRLLQLNPELRISAHDALQHPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  121 bits (303), Expect = 4e-31
 Identities = 87/344 (25%), Positives = 137/344 (39%), Gaps = 71/344 (20%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHDK 101
           +I  K+GEG+FG+V    DR+    VA+K++        K  E  + EI++L  L     
Sbjct: 3   RILRKLGEGSFGEVYLARDRKL---VALKVLAKKLESKSKEVERFLREIQILASLNHP-- 57

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYR-SFPIDLVREIARQLLECIA 159
                V++ ++F     + +V E + G SL D L+K   +          I  Q+L  + 
Sbjct: 58  --PNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALE 115

Query: 160 FMHDLCMIHTDLKPENVLLVSSEY-IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
           ++H   +IH D+KPEN+LL      +K+ D+                    A  + D GS
Sbjct: 116 YLHSKGIIHRDIKPENILLDRDGRVVKLIDF------------------GLAKLLPDPGS 157

Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPC---DIWSVGCILVELCTGEALFQTHENL 275
           T+      +  V T  Y APEV+LGL   Y     DIWS+G  L EL TG   F+  +N 
Sbjct: 158 TSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS 217

Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 335
              +   +++  LP   L                                       L  
Sbjct: 218 SATSQTLKIILELPTPSLA------------------------------------SPLSP 241

Query: 336 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
            + +  +   + LL+ LL  DP +RL++   L H       L+ 
Sbjct: 242 SNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKE 285

Length = 384

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score =  118 bits (297), Expect = 1e-30
 Identities = 98/336 (29%), Positives = 161/336 (47%), Gaps = 70/336 (20%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
            +GEG++G V++C  +E  ++VAIK        K  ++ AM EI +L+QL +H+      
Sbjct: 8   LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL-RHEN----L 62

Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDL----VREIARQLLECIAFMH 162
           V +   F  +  + +VFE +  ++ D L K     +P  L    VR+   Q+L  I F H
Sbjct: 63  VNLIEVFRRKKRLYLVFEFVDHTVLDDLEK-----YPNGLDESRVRKYLFQILRGIEFCH 117

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTY 221
              +IH D+KPEN+L VS                          +S  +K+ DFG + T 
Sbjct: 118 SHNIIHRDIKPENIL-VS--------------------------QSGVVKLCDFGFARTL 150

Query: 222 ERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
             P + Y   V+TR YRAPE+++G   +    DIW+VGC++ E+ TGE LF    +++ L
Sbjct: 151 AAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQL 210

Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL--IMQ 336
             + + LG L       + RH E +              +  + + M+LP ++ +  + +
Sbjct: 211 YHIIKCLGNL-------IPRHQEIF-------------QKNPLFAGMRLPEVKEIEPLEK 250

Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                +G +  L +  LR DP DR ++ + L H FF
Sbjct: 251 RFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  117 bits (295), Expect = 1e-30
 Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 54/258 (20%)

Query: 52  GEGTFGQVLECWDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           G G+FG V    D++  E++A+K   +    ++  EA   EI +L  L +H       V+
Sbjct: 9   GRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSL-QH----PNIVR 63

Query: 109 IR--NWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
                  + +N + I  E + G SL   L+K  +   P  ++R+  RQ+LE +A++H   
Sbjct: 64  YYGSERDEEKNTLNIFLEYVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNG 121

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           ++H D+K  N+L+ S                              +K+ DFG       D
Sbjct: 122 IVHRDIKGANILVDSD---------------------------GVVKLADFGCAK-RLGD 153

Query: 226 QNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
                 T   R      APEVI G  +    DIWS+GC ++E+ TG+  +   E    +A
Sbjct: 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPW--SELGNPMA 211

Query: 280 MMERVLG-----PLPQHM 292
            + ++        +P+H+
Sbjct: 212 ALYKIGSSGEPPEIPEHL 229

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  115 bits (291), Expect = 4e-30
 Identities = 81/327 (24%), Positives = 134/327 (40%), Gaps = 83/327 (25%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
            K+G+G FG+V +   +   + VAIK+++   K+ +E  + EI++L++  KH    N  V
Sbjct: 6   EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKC-KH---PN-IV 60

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +    +  ++ + IV E   G SL D L K+  ++     +  + ++LL+ + ++H   +
Sbjct: 61  KYYGSYLKKDELWIVMEFCSGGSLKDLL-KSTNQTLTESQIAYVCKELLKGLEYLHSNGI 119

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYE-RP 224
           IH D+K  N+LL S                              +K+IDFG S       
Sbjct: 120 IHRDIKAANILLTS---------------------------DGEVKLIDFGLSAQLSDTK 152

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
            +N +V T ++ APEVI G  + Y  DIWS+G   +EL  G+  +   E     A+ +  
Sbjct: 153 ARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPY--SELPPMKALFKIA 210

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
               P                   L  PE   S E                         
Sbjct: 211 TNGPP------------------GLRNPE-KWSDE------------------------- 226

Query: 345 LTHLLQGLLRYDPTDRLTAREALRHPF 371
               L+  L+ +P  R TA + L+HPF
Sbjct: 227 FKDFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  115 bits (291), Expect = 8e-30
 Identities = 79/333 (23%), Positives = 130/333 (39%), Gaps = 72/333 (21%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   ++E  +  AIKI+   +  +E       IE EVL +L  H  G    
Sbjct: 9   IGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGH-PG---I 64

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           +++   F    ++  V E      L  ++RK  Y S      R  A ++L  + ++H   
Sbjct: 65  IKLYYTFQDEENLYFVLEYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSKG 122

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IH DLKPEN+LL    +IK+ D+ ++     +SS        S         +  E+  
Sbjct: 123 IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS------PESNKGDATNIDSQIEKNR 176

Query: 226 QN--YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
           +     V T  Y +PE++         D+W++GCI+ ++ TG+  F+             
Sbjct: 177 RRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFR------------- 223

Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
             G       +++    E         +P               P  ++LI         
Sbjct: 224 --GSNEYLTFQKI-LKLE-------YSFPPNFP-----------PDAKDLI--------- 253

Query: 344 DLTHLLQGLLRYDPTDRLTA----REALRHPFF 372
                 + LL  DP DRL       E   HPFF
Sbjct: 254 ------EKLLVLDPQDRLGVNEGYDELKAHPFF 280

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score =  115 bits (290), Expect = 8e-30
 Identities = 95/336 (28%), Positives = 150/336 (44%), Gaps = 71/336 (21%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAKHDKGG 103
           K+GEGT+G V +  D+   E+VA+K +R      G+      A+ EI +L++L  H    
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVP---STAIREISLLKEL-NHPN-- 59

Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
              V++ +     N + +VFE L   L  ++  +        L++    QLL+ IA+ H 
Sbjct: 60  --IVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHS 117

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYE 222
             ++H DLKP+N+L+                            +  A+K+ DFG +  + 
Sbjct: 118 HRVLHRDLKPQNLLI---------------------------DREGALKLADFGLARAFG 150

Query: 223 RPDQNYI--VSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLEHL 278
            P + Y   V T  YRAPE++LG    Y  P DIWS+GCI  E+     LF     ++ L
Sbjct: 151 VPVRTYTHEVVTLWYRAPEILLG-SRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQL 209

Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL--IMQ 336
             + R LG   + +                  WP G  S    K        Q+L  ++ 
Sbjct: 210 FRIFRTLGTPDEDV------------------WP-GVTSLPDYKPTFPKWARQDLSKVVP 250

Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           ++D    D   LL  +L YDP  R++A+ AL+HP+F
Sbjct: 251 NLDEDGLD---LLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score =  114 bits (287), Expect = 6e-29
 Identities = 96/343 (27%), Positives = 155/343 (45%), Gaps = 68/343 (19%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMI--EIEVLQQLAKHDKG 102
           KI   +G+G++G V    D    E VAIK +  + ++  +A  I  EI++L+ L   D  
Sbjct: 3   KIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPD-- 60

Query: 103 GNRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE----IAR 152
               V+I++        ++++ I +VFE + S L+  ++ N+      DL  E       
Sbjct: 61  ---IVEIKHIMLPPSRREFKD-IYVVFELMESDLHQVIKAND------DLTPEHHQFFLY 110

Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           QLL  + ++H   + H DLKP+N+L  +   +K+ D+  +     D+         +AI 
Sbjct: 111 QLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP--------TAIF 162

Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQ 270
             D+             V+TR YRAPE+       +T   DIWS+GCI  E+ TG+ LF 
Sbjct: 163 WTDY-------------VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFP 209

Query: 271 THENLEHLAMMERVLGPLPQHMLKRV-DRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 329
               +  L ++  +LG      + RV +  A +Y+   R   P        +    K P 
Sbjct: 210 GKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQP--------VPFSQKFPN 261

Query: 330 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
              L ++           LL+ LL +DP DR TA EAL  P+F
Sbjct: 262 ADPLALR-----------LLERLLAFDPKDRPTAEEALADPYF 293

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score =  112 bits (282), Expect = 2e-28
 Identities = 97/342 (28%), Positives = 150/342 (43%), Gaps = 74/342 (21%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAKHDKGG 103
           K+GEGT+G+V +  D+   ++VA+K  R      GI      A+ EI +LQ L+      
Sbjct: 8   KIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPP---TALREISLLQMLS-ESIYI 63

Query: 104 NRCVQIRNWFDYRNHICI--VFEKLGSSLYDFL---RKNNYRSFPIDLVREIARQLLECI 158
            R + + +  +      +  VFE L S L  F+    +   R  P   ++    QLL+ +
Sbjct: 64  VRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGV 123

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 217
           A  H   ++H DLKP+N+L+   + +                          +K+ D G 
Sbjct: 124 AHCHKHGVMHRDLKPQNLLVDKQKGL--------------------------LKIADLGL 157

Query: 218 STTYERPDQNYI--VSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHE 273
              +  P ++Y   + T  YRAPEV+LG    Y  P DIWSVGCI  E+   + LF    
Sbjct: 158 GRAFSIPVKSYTHEIVTLWYRAPEVLLG-STHYSTPVDIWSVGCIFAEMSRKQPLFPGDS 216

Query: 274 NLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
            L+ L  + ++LG P  Q                    WP  +  R+  +     P  Q+
Sbjct: 217 ELQQLLHIFKLLGTPTEQ-------------------VWPGVSKLRDWHEFPQWKP--QD 255

Query: 333 L--IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           L   +  +     D   LLQ +LRYDP  R++A+ AL HP+F
Sbjct: 256 LSRAVPDLSPEGLD---LLQKMLRYDPAKRISAKAALTHPYF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score =  112 bits (281), Expect = 2e-28
 Identities = 95/335 (28%), Positives = 159/335 (47%), Gaps = 68/335 (20%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAKHDKGG 103
           K+GEGT+G V +  +++  ++VA+K +R      G+      A+ EI +L++L +H    
Sbjct: 7   KIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVP---STAIREISLLKEL-QHPN-- 60

Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSL---YDFLRKNNYRSFPIDLVREIARQLLECIAF 160
              V +++     + + ++FE L   L    D L K  Y     +LV+    Q+L+ I F
Sbjct: 61  --IVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQY--MDAELVKSYLYQILQGILF 116

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
            H   ++H DLKP+N+L+ +   IK+ D+               + ++  I V  +   T
Sbjct: 117 CHSRRVLHRDLKPQNLLIDNKGVIKLADFG--------------LARAFGIPVRVY---T 159

Query: 221 YERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           +E       V T  YRAPEV+LG   ++ P DIWS+G I  E+ T + LF     ++ L 
Sbjct: 160 HE-------VVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLF 212

Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL--IMQH 337
            + R+LG  P                     WP G  S    K+     +  +L   +++
Sbjct: 213 RIFRILGT-PTE-----------------DVWP-GVTSLPDYKNTFPKWKKGSLRSAVKN 253

Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           +D    D   LL+ +L YDP  R++A++AL HP+F
Sbjct: 254 LDEDGLD---LLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score =  110 bits (276), Expect = 8e-28
 Identities = 85/333 (25%), Positives = 141/333 (42%), Gaps = 59/333 (17%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHD---- 100
           +++G G +G V +  D      VA+K VR ++   +   +    E+ +L++L   D    
Sbjct: 6   AEIGVGAYGTVYKARDPHSGHFVALKSVR-VQTNEDGLPLSTVREVALLKRLEAFDHPNI 64

Query: 101 -KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
            +  + C   R   D    + +VFE +   L  +L K      P + ++++ RQ L  + 
Sbjct: 65  VRLMDVCATSRT--DRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLD 122

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           F+H  C++H DLKPEN+L+ S   +K+ D+  +        Y  +M  +           
Sbjct: 123 FLHANCIVHRDLKPENILVTSGGQVKLADFGLA------RIYSCQMALTP---------- 166

Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
                    +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +   + L 
Sbjct: 167 ---------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG 217

Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
            +  ++G  P+                   DWP          S    PR    +   V 
Sbjct: 218 KIFDLIGLPPED------------------DWPRDVTLPRGAFS----PRGPRPVQSVVP 255

Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                   LL  +L ++P  R++A  AL+HPFF
Sbjct: 256 EIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score =  109 bits (275), Expect = 2e-27
 Identities = 93/357 (26%), Positives = 153/357 (42%), Gaps = 73/357 (20%)

Query: 46  KIHSKMGEGTFGQVLECW--DRERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLAKH 99
           +I   +G GT+G+V +    + +  +  AIK  +G K+       +A  EI +L++L KH
Sbjct: 3   EIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL-KH 61

Query: 100 DKGGNRCVQIRNWF--DYRNHICIVFEKLGSSLYDFL------RKNNYRSFPIDLVREIA 151
           +      V +   F       + ++F+    + +D        R+    S P  +V+ + 
Sbjct: 62  EN----VVSLVEVFLEHADKSVYLLFD---YAEHDLWQIIKFHRQAKRVSIPPSMVKSLL 114

Query: 152 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
            Q+L  + ++H   ++H DLKP N+L++                          P+   +
Sbjct: 115 WQILNGVHYLHSNWVLHRDLKPANILVMGEG-----------------------PERGVV 151

Query: 212 KVIDFG-STTYERP-----DQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCT 264
           K+ D G +  +  P     D + +V T  YRAPE++LG   +T   DIW++GCI  EL T
Sbjct: 152 KIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 211

Query: 265 GEALFQTHE------NLEHLAMMER---VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA 315
            E +F+  E      N      +ER   VLG   +     + +  E Y      D+    
Sbjct: 212 LEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPE-Y-DTLMKDFKTKT 269

Query: 316 ASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
               S+   M+          H    +     LL+ LL YDPT R+TA EAL HP+F
Sbjct: 270 YPSNSLAKWMEK---------HKKPDSQGF-DLLRKLLEYDPTKRITAEEALEHPYF 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  107 bits (271), Expect = 3e-27
 Identities = 81/329 (24%), Positives = 134/329 (40%), Gaps = 88/329 (26%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIE--VLQQLAKHDKGGNRCV 107
           G+G+FG+VL    ++  ++ A+K+++   I K +E      E  +L ++  H       V
Sbjct: 2   GKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-NHP----FIV 56

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++   F     + +V E   G  L+  L K     F  +  R  A +++  + ++H L +
Sbjct: 57  KLHYAFQTEEKLYLVLEYAPGGELFSHLSK--EGRFSEERARFYAAEIVLALEYLHSLGI 114

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           I+ DLKPEN+LL +  +IK+ D+                    A ++   GS T      
Sbjct: 115 IYRDLKPENILLDADGHIKLTDF------------------GLAKELSSEGSRTNT---- 152

Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 286
                T  Y APEV+LG G+    D WS+G +L E+ TG+  F   +  E   + E++L 
Sbjct: 153 --FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE---IYEKIL- 206

Query: 287 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT 346
                              +  L +PE  +                           +  
Sbjct: 207 -------------------KDPLRFPEFLSP--------------------------EAR 221

Query: 347 HLLQGLLRYDPTDRLTAREA---LRHPFF 372
            L+ GLL+ DPT RL +  A     HPFF
Sbjct: 222 DLISGLLQKDPTKRLGSGGAEEIKAHPFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  106 bits (268), Expect = 8e-27
 Identities = 81/328 (24%), Positives = 129/328 (39%), Gaps = 78/328 (23%)

Query: 54  GTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHDKGGNRCVQI 109
           G +G+V     +   ++ AIK+++     R+      + E ++L Q           V++
Sbjct: 4   GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ-----SPYVVKL 58

Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
              F  + ++ +V E L G  L   L   N  S   D+ R    +++  + ++H   +IH
Sbjct: 59  YYSFQGKKNLYLVMEYLPGGDLASLLE--NVGSLDEDVARIYIAEIVLALEYLHSNGIIH 116

Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DLKP+N+L+ S+ ++K+ D+   L      S    + +   +   +             
Sbjct: 117 RDLKPDNILIDSNGHLKLTDF--GL------SKVGLVRRQINLNDDEKEDKR-------- 160

Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 288
           IV T  Y APEVILG G +   D WS+GCIL E   G   F  H         E +    
Sbjct: 161 IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPF--HGETP-----EEIF--- 210

Query: 289 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 348
            Q++L             G+++WPE          V       +LI              
Sbjct: 211 -QNILN------------GKIEWPED---------VEVSDEAIDLI-------------- 234

Query: 349 LQGLLRYDPTDRLTAR---EALRHPFFT 373
              LL  DP  RL A+   E   HPFF 
Sbjct: 235 -SKLLVPDPEKRLGAKSIEEIKNHPFFK 261

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score =  107 bits (270), Expect = 9e-27
 Identities = 93/344 (27%), Positives = 148/344 (43%), Gaps = 76/344 (22%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHDKGGN 104
            ++GEGT+GQV +  D++  E+VA+K VR +   +E     A+ EI++L+QL  H    N
Sbjct: 13  GQIGEGTYGQVYKARDKDTGELVALKKVR-LDNEKEGFPITAIREIKILRQL-NHRNIVN 70

Query: 105 RC---VQIRNWFDYRNH---ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
                   ++  D++       +VFE +   L   L ++    F  D ++   +QLLE +
Sbjct: 71  LKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLL-ESGLVHFSEDHIKSFMKQLLEGL 129

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            + H    +H D+K  N+LL +   IK+ D+  +     + S                  
Sbjct: 130 NYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES------------------ 171

Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPC-DIWSVGCILVELCTGEALFQTHENLEH 277
               RP  N ++ T  YR PE++LG     P  D+WS GCIL EL T + +FQ ++ L  
Sbjct: 172 ----RPYTNKVI-TLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQ 226

Query: 278 LAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL--- 333
           L ++ R+ G P P                     WP+          V+KLP    +   
Sbjct: 227 LELISRLCGSPCPA-------------------VWPD----------VIKLPYFNTMKPK 257

Query: 334 ------IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                 + +           LL  +L  DP+ R TA EAL  P+
Sbjct: 258 KQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPW 301

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score =  107 bits (270), Expect = 2e-26
 Identities = 88/349 (25%), Positives = 148/349 (42%), Gaps = 73/349 (20%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREA--AMIEIEVLQQLAKHDKG 102
           K    +G G +G V    D    + VAIK I         A   + E+++L+   KHD  
Sbjct: 8   KPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHF-KHDN- 65

Query: 103 GNRCVQIRNWF----DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
               + IR+           + +V + + S L+  +  +  +    + +R    QLL  +
Sbjct: 66  ---IIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHSD--QPLTEEHIRYFLYQLLRGL 120

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVID 215
            ++H   +IH DLKP N+L+     +++ D+   +    +P +  YF  M          
Sbjct: 121 KYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYF--M---------- 168

Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHEN 274
              T Y        V+TR YRAPE++L L  +T   D+WSVGCI  E+     LF     
Sbjct: 169 ---TEY--------VATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY 217

Query: 275 LEHLAMMERVLGPLPQHMLK-----RVDRHAEKYVRRGRLDWPE--GAASRESIKSVMKL 327
           +  L ++  VLG   + +L      RV ++ +   R+  + W +    AS E++      
Sbjct: 218 VHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALD----- 272

Query: 328 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                               LL  +L++DP +R+T  +AL+HPF  + H
Sbjct: 273 --------------------LLSQMLQFDPEERITVEQALQHPFLAQYH 301

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score =  106 bits (266), Expect = 2e-26
 Identities = 91/333 (27%), Positives = 154/333 (46%), Gaps = 64/333 (19%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHDKGGNR 105
           K+GEGT+G V +  DR   E +A+K +R +++  E     A+ EI +L+++ +H      
Sbjct: 9   KIGEGTYGVVYKARDRVTNETIALKKIR-LEQEDEGVPSTAIREISLLKEM-QHGN---- 62

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            V++++       + +VFE L   L   +  +   +    L++    Q+L  IA+ H   
Sbjct: 63  IVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR 122

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERP 224
           ++H DLKP+N+L+                             ++A+K+ DFG +  +  P
Sbjct: 123 VLHRDLKPQNLLIDRR--------------------------TNALKLADFGLARAFGIP 156

Query: 225 DQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
            + +   V T  YRAPE++LG   ++ P DIWSVGCI  E+   + LF     ++ L  +
Sbjct: 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKI 216

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL--IMQHVD 339
            R+LG   +                    WP G  S    KS       ++L  ++  ++
Sbjct: 217 FRILGTPNEET------------------WP-GVTSLPDYKSAFPKWPPKDLATVVPTLE 257

Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
            +  D   LL  +LR DP+ R+TAR AL H +F
Sbjct: 258 PAGVD---LLSKMLRLDPSKRITARAALEHEYF 287

Length = 294

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score =  105 bits (265), Expect = 3e-26
 Identities = 97/348 (27%), Positives = 152/348 (43%), Gaps = 86/348 (24%)

Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAK 98
           +K+  K+GEGT+G V +  +RE  E+VA+K VR      G+     +A+ EI +L++L K
Sbjct: 3   EKL-EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP---SSALREICLLKEL-K 57

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           H       V++ +       + +VFE     L  +    N    P ++V+    QLL+ +
Sbjct: 58  H----KNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDP-EIVKSFMFQLLKGL 112

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 217
           AF H   ++H DLKP+N+L+                            K+  +K+ DFG 
Sbjct: 113 AFCHSHNVLHRDLKPQNLLI---------------------------NKNGELKLADFGL 145

Query: 218 STTYERPDQNYI--VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCT-GEALFQTHE 273
           +  +  P + Y   V T  YR P+V+ G   ++   D+WS GCI  EL   G  LF  ++
Sbjct: 146 ARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND 205

Query: 274 NLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
             + L  + R+LG P  +                    WP           V KLP  + 
Sbjct: 206 VDDQLKRIFRLLGTPTEE-------------------SWP----------GVSKLPDYKP 236

Query: 333 LIMQHVDHSAGDLT--------HLLQGLLRYDPTDRLTAREALRHPFF 372
             M     S  ++          LLQ LL  +P  R++A EAL+HP+F
Sbjct: 237 YPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score =  103 bits (260), Expect = 3e-25
 Identities = 84/345 (24%), Positives = 143/345 (41%), Gaps = 62/345 (17%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLA---- 97
           +I  K+GEGTFG+V +    +   +VA+K +  +   ++     A+ EI++L++L     
Sbjct: 11  EILGKLGEGTFGEVYKARQIKTGRVVALKKIL-MHNEKDGFPITALREIKILKKLKHPNV 69

Query: 98  ---------KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVR 148
                    + DK   +          R  + +V   +   L   L   + +      ++
Sbjct: 70  VPLIDMAVERPDKSKRK----------RGSVYMVTPYMDHDLSGLLENPSVKLTESQ-IK 118

Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
               QLLE I ++H+  ++H D+K  N+L+ +   +K+ D+   L  P D       PK 
Sbjct: 119 CYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADF--GLARPYDGP--PPNPKG 174

Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEA 267
                   G     R   N +V TR YR PE++LG   +T   DIW +GC+  E+ T   
Sbjct: 175 --------GGGGGTRKYTNLVV-TRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRP 225

Query: 268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 327
           + Q   +++ L ++ ++ G   +                    WP G  S    + V   
Sbjct: 226 ILQGKSDIDQLHLIFKLCGTPTEE------------------TWP-GWRSLPGCEGVHSF 266

Query: 328 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                 + +       +   LL  LL  DP  RLTA +AL HP+F
Sbjct: 267 TNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score =  103 bits (258), Expect = 7e-25
 Identities = 82/357 (22%), Positives = 149/357 (41%), Gaps = 82/357 (22%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYRE---------AAMIEIEVLQQ 95
           +GEGT+G+V + +D    ++VAIK V+       + K R+           + E++++ +
Sbjct: 17  LGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNE 76

Query: 96  LAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           +   +  G   V +   F     I +V + + S L   +  +         V+ I  Q+L
Sbjct: 77  IKHENIMGLVDVYVEGDF-----INLVMDIMASDLKKVV--DRKIRLTESQVKCILLQIL 129

Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIK 212
             +  +H    +H DL P N+ + S    K+ D+   +   + P   +  K        +
Sbjct: 130 NGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREE 189

Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQT 271
           +      T +       V T  YRAPE+++G   + +  D+WSVGCI  EL TG+ LF  
Sbjct: 190 M------TSK-------VVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPG 236

Query: 272 HENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEG----------AASRES 320
              ++ L  +  +LG P                      +WP+               + 
Sbjct: 237 ENEIDQLGRIFELLGTPNED-------------------NWPQAKKLPLYTEFTPRKPKD 277

Query: 321 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
           +K++               +++ D   LLQ LL+ +P +R++A+EAL+H +F  D L
Sbjct: 278 LKTIFP-------------NASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPL 321

Length = 335

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score =  102 bits (256), Expect = 1e-24
 Identities = 91/338 (26%), Positives = 149/338 (44%), Gaps = 67/338 (19%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR--------EAAMIEIEVLQQLAKHDK- 101
           +G G +G V    DR     VAIK     K YR        + A  E+ +L+ + KH+  
Sbjct: 23  VGSGAYGTVCSALDRRTGAKVAIK-----KLYRPFQSELFAKRAYRELRLLKHM-KHENV 76

Query: 102 -GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
            G           D  +   +V   +G+ L   ++   +     D ++ +  Q+L+ + +
Sbjct: 77  IGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKY 133

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   +IH DLKP N L V+ +                            +K++DFG   
Sbjct: 134 IHAAGIIHRDLKPGN-LAVNED--------------------------CELKILDFGLAR 166

Query: 221 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
               +    V TR YRAPEVIL  + +T   DIWSVGCI+ E+ TG+ LF+ H++L+ L 
Sbjct: 167 QTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLM 226

Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
            + +V G   +  ++++                    S ++   V KLPR +    + + 
Sbjct: 227 EIMKVTGTPSKEFVQKLQ-------------------SEDAKNYVKKLPRFRKKDFRSLL 267

Query: 340 HSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
            +A  L  ++L+ +L  D   R+TA EAL HP+F   H
Sbjct: 268 PNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH 305

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score =  101 bits (253), Expect = 1e-24
 Identities = 85/335 (25%), Positives = 144/335 (42%), Gaps = 62/335 (18%)

Query: 49  SKMGEGTFGQVLECWD-RERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLAKHDKGG 103
           +++GEG +G+V +  D +     VA+K VR ++   E    + + E+ VL+ L   +   
Sbjct: 7   AEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLETFEHPN 65

Query: 104 -----NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
                + C   R   D    + +VFE +   L  +L K      P + ++++  QLL  +
Sbjct: 66  VVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 123

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            F+H   ++H DLKP+N+L+ SS  IK+ D+  +                   ++  F  
Sbjct: 124 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA-------------------RIYSFQM 164

Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
                     +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF+   +++ L
Sbjct: 165 AL------TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 218

Query: 279 AMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 337
             +  V+G P  +                   DWP   A             ++  +   
Sbjct: 219 GKILDVIGLPGEE-------------------DWPRDVALPRQAFHSKSAQPIEKFV-TD 258

Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           +D    D   LL   L ++P  R++A  AL HP+F
Sbjct: 259 IDELGKD---LLLKCLTFNPAKRISAYSALSHPYF 290

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score =  102 bits (255), Expect = 2e-24
 Identities = 95/338 (28%), Positives = 142/338 (42%), Gaps = 76/338 (22%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIK-IVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCV 107
           +G G +G V    D+   E VAIK + R  +   + + A  E+ +L+ +   +  G   V
Sbjct: 23  VGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDV 82

Query: 108 QIRNWFDYRNHICIVFEKLGSSLYDF----------LRKNNYRSFPIDLVREIARQLLEC 157
                              G    DF          L+K        D V+ +  Q+L  
Sbjct: 83  F-------------TSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCG 129

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + ++H   +IH DLKP N L V+ +                            +K++DFG
Sbjct: 130 LKYIHSAGIIHRDLKPGN-LAVNED--------------------------CELKILDFG 162

Query: 218 STTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
              +   +    V TR YRAPEVIL  + +    DIWSVGCI+ E+ TG+ LF+  + L+
Sbjct: 163 LARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 222

Query: 277 HLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLI 334
            L  + +V G P P+ + K  D+ A+ Y                 IKS+ K PR   + +
Sbjct: 223 QLTQILKVTGVPGPEFVQKLEDKAAKSY-----------------IKSLPKYPRKDFSTL 265

Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                  A D   LL+ +L  D   RLTA EAL HP+F
Sbjct: 266 FPKASPQAVD---LLEKMLELDVDKRLTATEALEHPYF 300

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  100 bits (251), Expect = 2e-24
 Identities = 79/332 (23%), Positives = 137/332 (41%), Gaps = 93/332 (28%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           G+G+FG+V     +   ++  +K +      +K RE A+ E+++L++L  H    N  ++
Sbjct: 9   GKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL-NHP---N-IIK 63

Query: 109 IRNWFDYRNHICIVFEKL-GSSLYDFL--RKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
               F+ +  +CIV E   G  L   +  +K   + FP + + +   QL   + ++H   
Sbjct: 64  YYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK 123

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERP 224
           ++H D+KP+N+ L +S  +                          +K+ DFG S      
Sbjct: 124 ILHRDIKPQNIFL-TSNGL--------------------------VKLGDFGISKVLSST 156

Query: 225 DQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM-- 280
                 +V T +Y +PE+     + Y  DIWS+GC+L ELCT +  F+  ENL  LA+  
Sbjct: 157 VDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFE-GENLLELALKI 215

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
           ++    P+P             Y             S E          L+NL+      
Sbjct: 216 LKGQYPPIPSQ-----------Y-------------SSE----------LRNLV------ 235

Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                      LL+ DP +R +  + L+ PF 
Sbjct: 236 ---------SSLLQKDPEERPSIAQILQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score =  101 bits (253), Expect = 2e-24
 Identities = 84/338 (24%), Positives = 145/338 (42%), Gaps = 72/338 (21%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-----EIEVLQQLAKHDKGGNR 105
           +G G FG V    D+   + VAIK +  +K +    +      E+++L+ L +H+     
Sbjct: 18  VGMGAFGLVCSARDQLTGQNVAIKKI--MKPFSTPVLAKRTYRELKLLKHL-RHEN---- 70

Query: 106 CVQIRNWF-DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            + + + F      I  V E LG+ L+  L     R      ++    Q+L  + ++H  
Sbjct: 71  IISLSDIFISPLEDIYFVTELLGTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSA 127

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            ++H DLKP N+L+                            ++  +K+ DFG    + P
Sbjct: 128 GVVHRDLKPSNILI---------------------------NENCDLKICDFGLARIQDP 160

Query: 225 DQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
                VSTR+YRAPE++L    +    DIWS GCI  E+  G+ LF   +++   +++  
Sbjct: 161 QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITD 220

Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR-----LQNLIMQHV 338
           +LG  P  ++  +                    S  +++ V  LP+           ++ 
Sbjct: 221 LLGTPPDDVINTI-------------------CSENTLRFVQSLPKREPVPFSEKF-KNA 260

Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
           D SA D   LL+ +L +DP  R++A EAL HP+    H
Sbjct: 261 DPSAID---LLEKMLVFDPQKRISAAEALAHPYLAPYH 295

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 99.2 bits (248), Expect = 5e-24
 Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 41/227 (18%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA---AMIEIEVLQQLAKHDKG 102
           ++   +G G FG V +  + E  + VAIK +   K   EA    M EI++L+ L KH   
Sbjct: 3   QLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL-KH--- 58

Query: 103 GNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
               V+     +  + + I+ E     SL   ++K     FP  LV     Q+L+ +A++
Sbjct: 59  -PNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFG--PFPESLVAVYVYQVLQGLAYL 115

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H+  +IH D+K  N+L                             K   +K+ DFG  T 
Sbjct: 116 HEQGVIHRDIKAANIL---------------------------TTKDGVVKLADFGVATK 148

Query: 222 ---ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                 D   +V T ++ APEVI   G +   DIWS+GC ++EL TG
Sbjct: 149 LNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTG 195

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score =  100 bits (250), Expect = 1e-23
 Identities = 72/270 (26%), Positives = 114/270 (42%), Gaps = 51/270 (18%)

Query: 114 DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKP 173
           D    I +V E + S L+  +     +    D V+    Q+L  + ++H   ++H D+KP
Sbjct: 74  DPFEEIYVVTELMQSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKP 131

Query: 174 ENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI---- 229
            N LLV+S  +                          +K+ DFG    E PD++      
Sbjct: 132 GN-LLVNSNCV--------------------------LKICDFGLARVEEPDESKHMTQE 164

Query: 230 VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 288
           V T++YRAPE+++G   +T   DIWSVGCI  EL     LFQ    ++ L ++  +LG  
Sbjct: 165 VVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTP 224

Query: 289 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 348
               ++     A  ++ R                   K P L  L       +  +  HL
Sbjct: 225 SLEAMRSACEGARAHILR----------------GPHKPPSLPVLYT-LSSQATHEAVHL 267

Query: 349 LQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
           L  +L +DP  R++A +AL HP+     LR
Sbjct: 268 LCRMLVFDPDKRISAADALAHPYLDEGRLR 297

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 99.7 bits (248), Expect = 1e-23
 Identities = 85/348 (24%), Positives = 150/348 (43%), Gaps = 83/348 (23%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 23  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 73

Query: 101 KGGN-----RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N              +  N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 74  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 130

Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+ +                            +   +K++D
Sbjct: 131 RGLKYIHSADIIHRDLKPSNLAV---------------------------NEDCELKILD 163

Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 164 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 223

Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL--QN 332
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++   N
Sbjct: 224 IDQLKLILRLVGTPGAELLKKISSE----------------SARNYIQSLTQMPKMNFAN 267

Query: 333 LIM----QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
           + +      VD        LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 VFIGANPLAVD--------LLEKMLVLDSDKRITAAQALAHAYFAQYH 307

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 97.8 bits (244), Expect = 2e-23
 Identities = 68/259 (26%), Positives = 109/259 (42%), Gaps = 52/259 (20%)

Query: 50  KMGEGTFGQVLECWDRERKEMVA---IKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+G GTFG+V    + +  E++A   I+I     K  +    E++VL+ L KH       
Sbjct: 7   KIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELL-KHP------ 59

Query: 107 VQIRNWFDY------RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
               N   Y      R  + I  E   G +L + L   + R     ++R    QLLE +A
Sbjct: 60  ----NLVKYYGVEVHREKVYIFMEYCSGGTLEELLE--HGRILDEHVIRVYTLQLLEGLA 113

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   ++H D+KP N+ L  +  IK+ D+  +                     +   +T
Sbjct: 114 YLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCA-------------------VKLKNNTT 154

Query: 220 TYERPDQNYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELCTG----EALFQTH 272
           T     Q+    T  Y APEVI G    G     DIWS+GC+++E+ TG      L    
Sbjct: 155 TMGEEVQSL-AGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF 213

Query: 273 ENLEHLAMMERVLGPLPQH 291
           + + H+    +   P+P  
Sbjct: 214 QIMFHVGAGHK--PPIPDS 230

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 98.9 bits (247), Expect = 3e-23
 Identities = 88/346 (25%), Positives = 141/346 (40%), Gaps = 85/346 (24%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN 111
           G G +GQV   +D +    VAIK     K  R           Q A H K   R +++  
Sbjct: 24  GSGAYGQVCSAFDTKTGRKVAIK-----KLSRPF---------QSAIHAKRTYRELRLLK 69

Query: 112 WFDYRNHIC------------------IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQ 153
             D+ N I                   +V   +G+ L + ++    +    D ++ +  Q
Sbjct: 70  HMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKC---QKLSDDHIQFLVYQ 126

Query: 154 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 213
           +L  + ++H   +IH DLKP N+ +     +K+ D+  + HT                  
Sbjct: 127 ILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHT------------------ 168

Query: 214 IDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTH 272
            D   T Y        V+TR YRAPE++L  + +    DIWSVGCI+ EL TG+ LF   
Sbjct: 169 -DDEMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGS 219

Query: 273 ENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 331
           ++++ L  +  ++G P  + + K     A  Y++                     LP++ 
Sbjct: 220 DHIDQLKRIMNLVGTPDEELLQKISSESARNYIQ--------------------SLPQMP 259

Query: 332 NLIMQHVDHSAG-DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
               + V   A      LL+ +L  DP  R+TA EAL HP+    H
Sbjct: 260 KKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYH 305

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 97.8 bits (244), Expect = 4e-23
 Identities = 82/349 (23%), Positives = 141/349 (40%), Gaps = 81/349 (23%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHD---- 100
           +K+G+GTFG+V +   ++ K++VA+K V  ++  +E     A+ EI++LQ L KH+    
Sbjct: 18  AKIGQGTFGEVFKARHKKTKQIVALKKVL-MENEKEGFPITALREIKILQLL-KHENVVN 75

Query: 101 ---------KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIA 151
                       NR         Y+    +VFE     L   L  N    F +  ++++ 
Sbjct: 76  LIEICRTKATPYNR---------YKGSFYLVFEFCEHDLAGLL-SNKNVKFTLSEIKKVM 125

Query: 152 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
           + LL  + ++H   ++H D+K  N+L+                            K   +
Sbjct: 126 KMLLNGLYYIHRNKILHRDMKAANILIT---------------------------KDGIL 158

Query: 212 KVIDFG-------STTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELC 263
           K+ DFG       S   +       V T  YR PE++LG   +  P D+W  GCI+ E+ 
Sbjct: 159 KLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMW 218

Query: 264 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 323
           T   + Q +     L ++ ++ G +   +   VD    K     +++ P+G   +   + 
Sbjct: 219 TRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVD----KLELFKKMELPQGQKRKVKERL 274

Query: 324 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
              +     L              L+  LL  DP  R+ A  AL H FF
Sbjct: 275 KPYVKDPHAL-------------DLIDKLLVLDPAKRIDADTALNHDFF 310

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 98.6 bits (245), Expect = 4e-23
 Identities = 88/343 (25%), Positives = 151/343 (44%), Gaps = 77/343 (22%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           +G G +G V   +D   ++ VA+K        ++   + YRE          +L KH K 
Sbjct: 23  VGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYREL---------RLLKHMKH 73

Query: 103 GNRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
            N  + + + F      +  N + +V   +G+ L + ++    +    + V+ +  QLL 
Sbjct: 74  EN-VIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVK---CQKLSDEHVQFLIYQLLR 129

Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + ++H   +IH DLKP NV +                            +   ++++DF
Sbjct: 130 GLKYIHSAGIIHRDLKPSNVAV---------------------------NEDCELRILDF 162

Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
           G       +    V+TR YRAPE++L  + +    DIWSVGCI+ EL  G+ALF  ++ +
Sbjct: 163 GLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI 222

Query: 276 EHLA-MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           + L  +ME V  P P+ + K    HA KY++                     LP +    
Sbjct: 223 DQLKRIMEVVGTPSPEVLKKISSEHARKYIQ--------------------SLPHMPQQD 262

Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
           ++ +   A  L   LL+ +L  D   R++A EAL HP+F++ H
Sbjct: 263 LKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH 305

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 95.7 bits (239), Expect = 1e-22
 Identities = 78/332 (23%), Positives = 125/332 (37%), Gaps = 89/332 (26%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKI--VRGIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
             +G+G+ G V +   +   ++ A+K   V G +++R+  + E++ L+   +        
Sbjct: 7   KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRS-CESPY----V 61

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-DL 164
           V+    F     I IV E + G SL D L+K      P  ++  IARQ+L+ + ++H   
Sbjct: 62  VKCYGAFYKEGEISIVLEYMDGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKR 119

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYER 223
            +IH D+KP N+L+ S   +K+                            DFG S   E 
Sbjct: 120 HIIHRDIKPSNLLINSKGEVKIA---------------------------DFGISKVLEN 152

Query: 224 ---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                  + V T  Y +PE I G  ++Y  DIWS+G  L+E   G+  F          +
Sbjct: 153 TLDQCNTF-VGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFEL 211

Query: 281 MERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
           M+ +  GP P                      P    S E                    
Sbjct: 212 MQAICDGPPP--------------------SLPAEEFSPE-------------------- 231

Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                    +   L+ DP  R +A E L+HPF
Sbjct: 232 -----FRDFISACLQKDPKKRPSAAELLQHPF 258

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 95.4 bits (238), Expect = 1e-22
 Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 39/261 (14%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRCV 107
           G G FG+V     + +    A+K V  R I +  +   I  E E+L++   H       V
Sbjct: 2   GVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HP----FIV 56

Query: 108 QIRNWFDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++   F  + +I ++ E  LG  L+  LR      F     R     ++    ++H+  +
Sbjct: 57  KLYRTFKDKKYIYMLMEYCLGGELWTILRDRG--LFDEYTARFYIACVVLAFEYLHNRGI 114

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           I+ DLKPEN+LL S+ Y+K+ D+  +                   K +  G  T+     
Sbjct: 115 IYRDLKPENLLLDSNGYVKLVDFGFA-------------------KKLKSGQKTWT---- 151

Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 286
                T  Y APE+IL  G+ +  D WS+G +L EL TG   F   ++ + + +   +L 
Sbjct: 152 --FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGE-DDEDPMEIYNDILK 208

Query: 287 PLPQHML-KRVDRHAEKYVRR 306
              +      +D+ A+  +++
Sbjct: 209 GNGKLEFPNYIDKAAKDLIKQ 229

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 94.9 bits (236), Expect = 2e-22
 Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 35/221 (15%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV------RGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           +G+G FG+V  C+D +    +A+K V         KK   A   EI++L+ L +H     
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QH----E 64

Query: 105 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
           R VQ          + I  E + G S+ D L+   Y +    + R+  RQ+LE + ++H 
Sbjct: 65  RIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHS 122

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             ++H D+K  N+L  S+  +K+ D+ +S          KR+     I      S T  +
Sbjct: 123 NMIVHRDIKGANILRDSAGNVKLGDFGAS----------KRL---QTICS----SGTGMK 165

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                +  T ++ +PEVI G G+    D+WSVGC +VE+ T
Sbjct: 166 S----VTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLT 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 95.5 bits (237), Expect = 2e-22
 Identities = 94/330 (28%), Positives = 146/330 (44%), Gaps = 60/330 (18%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA----MIEIEVLQQLAKHDKGGNR 105
           K+GEGT+  V +   +  + +VA+K +R   ++ E A    + E+ +L+ L KH      
Sbjct: 12  KLGEGTYATVFKGRSKLTENLVALKEIR--LEHEEGAPCTAIREVSLLKNL-KH----AN 64

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            V + +       + +VFE L S L  +L  N      +  V+    QLL  +++ H   
Sbjct: 65  IVTLHDIIHTERCLTLVFEYLDSDLKQYL-DNCGNLMSMHNVKIFMFQLLRGLSYCHKRK 123

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           ++H DLKP+N+L+     +K+ D+          +  K +P           + TY    
Sbjct: 124 ILHRDLKPQNLLINEKGELKLADF--------GLARAKSVP-----------TKTYSNE- 163

Query: 226 QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
               V T  YR P+V+LG   ++ P D+W VGCIL E+ TG  +F      E L ++ R+
Sbjct: 164 ----VVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRL 219

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP--RLQNLIMQHVDHSA 342
           LG   +                    WP G  S E  +S +  P  R Q LI  H     
Sbjct: 220 LGTPTEE------------------TWP-GITSNEEFRSYL-FPQYRAQPLI-NHAPRLD 258

Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
            D   LL  LL Y+   R++A  ALRH +F
Sbjct: 259 TDGIDLLSSLLLYETKSRISAEAALRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 93.6 bits (233), Expect = 5e-22
 Identities = 79/331 (23%), Positives = 132/331 (39%), Gaps = 91/331 (27%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMI---EIEVLQQLAKHDKGGN 104
           +G G+FG V E  + +  +  A+K V      +  +EA      EI +L +L +H     
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPN--- 63

Query: 105 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ        +++ I  E + G SL   L+K  Y SFP  ++R   RQ+L  + ++HD
Sbjct: 64  -IVQYLGTEREEDNLYIFLELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHD 120

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              +H D+K  N+L+ ++  +K+ D+  +              KS               
Sbjct: 121 RNTVHRDIKGANILVDTNGVVKLADFGMAKQ-----VVEFSFAKS--------------- 160

Query: 224 PDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
                   + ++ APEVI   G +    DIWS+GC ++E+ TG+  +   E +  +  + 
Sbjct: 161 -----FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIG 215

Query: 283 R--VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
           R   L P+P H+                        S E           ++ I++    
Sbjct: 216 RSKELPPIPDHL------------------------SDE----------AKDFILK---- 237

Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                       L+ DP+ R TA E L HPF
Sbjct: 238 -----------CLQRDPSLRPTAAELLEHPF 257

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 95.1 bits (237), Expect = 7e-22
 Identities = 87/330 (26%), Positives = 149/330 (45%), Gaps = 47/330 (14%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGG 103
           +  S +GEG +G V     +     VAIK +   +   + +  + EI++L++    +  G
Sbjct: 8   QNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIG 67

Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
              +     F+  N + IV E + + LY  ++  +  +   D ++    Q+L  + ++H 
Sbjct: 68  ILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQHLSN---DHIQYFLYQILRGLKYIHS 124

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             ++H DLKP N+LL ++  +K+ D+  +     +  +   +             T Y  
Sbjct: 125 ANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFL-------------TEY-- 169

Query: 224 PDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
                 V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   LF   + L  L ++ 
Sbjct: 170 ------VATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLIL 223

Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
            VLG   Q  L  +                    +R  IKS+   P++  N +  + D  
Sbjct: 224 GVLGTPSQEDLNCI----------------ISLRARNYIKSLPFKPKVPWNKLFPNADPK 267

Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
           A D   LL  +L ++P  R+T  EAL HP+
Sbjct: 268 ALD---LLDKMLTFNPHKRITVEEALAHPY 294

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 95.1 bits (236), Expect = 2e-21
 Identities = 90/346 (26%), Positives = 154/346 (44%), Gaps = 69/346 (19%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA---KHDKG 102
           K+ + +G G+FG V E    +  E VAIK V    +Y+   ++ ++ L  +      D  
Sbjct: 69  KLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYY 128

Query: 103 GNRCVQI--RNWFDYRNHICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECI 158
              C +   +N F     + +V E +  +++ +++    N  + P+ LV+  + QL   +
Sbjct: 129 YTECFKKNEKNIF-----LNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRAL 183

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
           A++H   + H DLKP+N+L+                           P +  +K+ DFGS
Sbjct: 184 AYIHSKFICHRDLKPQNLLI--------------------------DPNTHTLKLCDFGS 217

Query: 219 TTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
                  Q   +YI S R YRAPE++LG   +T   D+WS+GCI+ E+  G  +F    +
Sbjct: 218 AKNLLAGQRSVSYICS-RFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSS 276

Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L  + +VLG   +  LK ++              P  A         +K P ++   
Sbjct: 277 VDQLVRIIQVLGTPTEDQLKEMN--------------PNYAD--------IKFPDVKPKD 314

Query: 335 MQHV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
           ++ V    +  D  + +   L+Y+P  RL   EAL  PFF  D LR
Sbjct: 315 LKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFF--DDLR 358

Length = 440

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 92.5 bits (230), Expect = 5e-21
 Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 43/225 (19%)

Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S                 D +          +K
Sbjct: 126 QMLCGIKHLHSAGIIHRDLKPSNIVVKS-----------------DCT----------LK 158

Query: 213 VIDFG-----STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 267
           ++DFG      T++      Y+V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  
Sbjct: 159 ILDFGLARTAGTSFMMTP--YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTV 215

Query: 268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR-RGRLDWPEGAASRESIKSVMK 326
           LF   ++++    +   LG      + R+      YV  R +     G +  E    V+ 
Sbjct: 216 LFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKY---AGYSFEELFPDVLF 272

Query: 327 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
            P  ++    H    A     LL  +L  DP  R++  +AL+HP+
Sbjct: 273 PPDSES----HNKLKASQARDLLSKMLVIDPEKRISVDDALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 92.0 bits (229), Expect = 7e-21
 Identities = 93/341 (27%), Positives = 151/341 (44%), Gaps = 70/341 (20%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREA--AMIEIEVLQQLAKHDKGGNRCV 107
           +G G +G V    + E  E VAIK I        +A   + EI++L+ L  H+      +
Sbjct: 13  IGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHL-DHEN----VI 67

Query: 108 QIRNWF-----DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
            I++       +  N + IV+E + + L+  +R +  ++   D  +    QLL  + ++H
Sbjct: 68  AIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIH 125

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--STT 220
              ++H DLKP N+LL ++                             +K+ DFG   TT
Sbjct: 126 SANVLHRDLKPSNLLLNAN---------------------------CDLKICDFGLARTT 158

Query: 221 YERPDQ--NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
            E+ D    Y+V TR YRAPE++L    +T   D+WSVGCI  EL   + LF   + +  
Sbjct: 159 SEKGDFMTEYVV-TRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQ 217

Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL--IM 335
           L ++  +LG                      L +     +R  I+S+   PR Q+   + 
Sbjct: 218 LKLITELLGS----------------PSEEDLGFIRNEKARRYIRSLPYTPR-QSFARLF 260

Query: 336 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
            H +  A D   LL+ +L +DP+ R+T  EAL HP+    H
Sbjct: 261 PHANPLAID---LLEKMLVFDPSKRITVEEALAHPYLASLH 298

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 90.2 bits (224), Expect = 1e-20
 Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 37/231 (16%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKG 102
           K+  K+G+G++G V +       +  A+K V      +K RE A+ EI +L  +   +  
Sbjct: 3   KVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN-- 60

Query: 103 GNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNY--RSFPIDLVREIARQLLECIA 159
               +  +  F   N +CIV E      L   + K     +  P   +  I  QLL  + 
Sbjct: 61  ---IISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQ 117

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +H+  ++H DLK  N+LLV+++ +K+ D   S          K + K+ A   I     
Sbjct: 118 ALHEQKILHRDLKSANILLVANDLVKIGDLGIS----------KVLKKNMAKTQI----- 162

Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 270
                       T HY APEV  G  ++Y  DIWS+GC+L E+ T    F+
Sbjct: 163 -----------GTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFE 202

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 89.2 bits (222), Expect = 3e-20
 Identities = 82/337 (24%), Positives = 138/337 (40%), Gaps = 97/337 (28%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
            K+GEG  G+V +  DR   + VAIK +R  K+ +E  + EI +++   KH         
Sbjct: 25  EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDC-KHP-------N 76

Query: 109 IRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVRE----IARQLLECIAF 160
           I +++D     + + +V E + G SL D + +N      + +       + R++L+ + +
Sbjct: 77  IVDYYDSYLVGDELWVVMEYMDGGSLTDIITQN-----FVRMNEPQIAYVCREVLQGLEY 131

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 217
           +H   +IH D+K +N+LL                  KD S          +K+ DFG   
Sbjct: 132 LHSQNVIHRDIKSDNILL-----------------SKDGS----------VKLADFGFAA 164

Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
             T E+  +N +V T ++ APEVI    +    DIWS+G + +E+  GE           
Sbjct: 165 QLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGE----------- 213

Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 337
                      P ++               R   P  A    + K    +P L+N     
Sbjct: 214 -----------PPYL---------------REP-PLRALFLITTK---GIPPLKNP---- 239

Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            +  + +    L   L  DP  R +A E L+HPF  +
Sbjct: 240 -EKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 88.7 bits (220), Expect = 1e-19
 Identities = 83/348 (23%), Positives = 150/348 (43%), Gaps = 79/348 (22%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMIEIEVLQQLAKHD--------- 100
           +G G+ G V    D +  + VA+K IV    +  + A+ EI+++++L  HD         
Sbjct: 13  LGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVYEVL 71

Query: 101 --KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
              G +    + +  +  + + IV E + + L + L +        +  R    QLL  +
Sbjct: 72  GPSGSDLTEDVGSLTELNS-VYIVQEYMETDLANVLEQG---PLSEEHARLFMYQLLRGL 127

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            ++H   ++H DLKP NV + + + +                          +K+ DFG 
Sbjct: 128 KYIHSANVLHRDLKPANVFINTEDLV--------------------------LKIGDFGL 161

Query: 219 TTYERPD---QNYI---VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQT 271
                P    + Y+   + T+ YR+P ++L    +T   D+W+ GCI  E+ TG+ LF  
Sbjct: 162 ARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAG 221

Query: 272 HENLEHLAMMERVLGPLPQHMLKRVDRHA-----EKYVRRGRLDWPEGAASRESIKSVMK 326
              LE    M+ +L  +P  +++  DR+        +VR       +G   R  ++ ++ 
Sbjct: 222 AHELE---QMQLILESVP--VVREEDRNELLNVIPSFVRN------DGGEPRRPLRDLLP 270

Query: 327 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                      V+  A D    L+ +L ++P DRLTA EAL HP+ + 
Sbjct: 271 ----------GVNPEALD---FLEQILTFNPMDRLTAEEALMHPYMSC 305

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 87.8 bits (218), Expect = 2e-19
 Identities = 67/233 (28%), Positives = 107/233 (45%), Gaps = 55/233 (23%)

Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  + ++H   ++H DLKP N LLV+++                            +K
Sbjct: 113 QILCGLKYIHSANVLHRDLKPGN-LLVNAD--------------------------CELK 145

Query: 213 VIDFG-STTY-ERPDQN--YI---VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCT 264
           + DFG +  + E P +N  ++   V+TR YRAPE++L    +T   D+WSVGCIL EL  
Sbjct: 146 ICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLG 205

Query: 265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRV-DRHAEKYVRRGRLDWPEGAASRESIKS 323
            + +F+  + ++ L  + +VLG   +  L R+    A+ Y+R   L              
Sbjct: 206 RKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIR--SLPNIPK--------- 254

Query: 324 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                     I  + +  A D   LL+ LL +DPT R++  EAL HP+    H
Sbjct: 255 -KPFES----IFPNANPLALD---LLEKLLAFDPTKRISVEEALEHPYLAIWH 299

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 87.0 bits (215), Expect = 3e-19
 Identities = 85/328 (25%), Positives = 141/328 (42%), Gaps = 56/328 (17%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA----MIEIEVLQQLAKHDKGGNR 105
           K+GEGT+  V +   +    +VA+K +R   ++ E A    + E+ +L+ L KH      
Sbjct: 13  KLGEGTYATVYKGRSKLTDNLVALKEIR--LEHEEGAPCTAIREVSLLKDL-KHAN---- 65

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            V + +       + +VFE L   L  +L  +   S  +  V+    QLL  + + H   
Sbjct: 66  IVTLHDIIHTEKSLTLVFEYLDKDLKQYL-DDCGNSINMHNVKLFLFQLLRGLNYCHRRK 124

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           ++H DLKP+N+L+     +K+ D+               + ++ +I      + TY    
Sbjct: 125 VLHRDLKPQNLLINERGELKLADFG--------------LARAKSIP-----TKTYSNE- 164

Query: 226 QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
               V T  YR P+++LG   ++   D+W VGCI  E+ TG  LF      E L  + R+
Sbjct: 165 ----VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRI 220

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
           LG   +                    WP G  S E  KS        + +  H      D
Sbjct: 221 LGTPTEET------------------WP-GILSNEEFKSYNYPKYRADCLHNHAPRLDSD 261

Query: 345 LTHLLQGLLRYDPTDRLTAREALRHPFF 372
              LL  LL+++   R++A EA++HP+F
Sbjct: 262 GAELLSKLLQFEGRKRISAEEAMKHPYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 85.5 bits (212), Expect = 7e-19
 Identities = 87/337 (25%), Positives = 140/337 (41%), Gaps = 71/337 (21%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHDKGGNR 105
           K+GEG++  V +   +   ++VA+K +R   ++ E     A+ E  +L+ L KH      
Sbjct: 12  KLGEGSYATVYKGRSKLTGQLVALKEIR--LEHEEGAPFTAIREASLLKDL-KH----AN 64

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            V + +    +  + +VFE L + L  ++         +  VR    QLL  +A+ H   
Sbjct: 65  IVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRR 123

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-------- 217
           ++H DLKP+N LL+S                          +   +K+ DFG        
Sbjct: 124 VLHRDLKPQN-LLIS--------------------------ERGELKLADFGLARAKSVP 156

Query: 218 STTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN-L 275
           S TY     N +V T  YR P+V+LG   ++   D+W VGCI  E+ TG  LF    +  
Sbjct: 157 SKTY----SNEVV-TLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE 211

Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 335
           + L  + RVLG   +     V  + E          P    +          PRL  +  
Sbjct: 212 DQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINH--------APRLDRIP- 262

Query: 336 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                       L    L+Y+P  R++A EA++HP+F
Sbjct: 263 --------HGEELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 85.5 bits (211), Expect = 2e-18
 Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 32/221 (14%)

Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+               + +++   
Sbjct: 131 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG--------------LARTACT- 175

Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
             +F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ EL  G  +FQ  
Sbjct: 176 --NFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225

Query: 273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
           ++++    +   LG      + R+      YV   R  +P    S E +      P    
Sbjct: 226 DHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYV-ENRPQYP--GISFEELFPDWIFPSES- 281

Query: 333 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
              +           LL  +L  DP  R++  EALRHP+ T
Sbjct: 282 ---ERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT 319

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 84.7 bits (210), Expect = 3e-18
 Identities = 75/340 (22%), Positives = 121/340 (35%), Gaps = 80/340 (23%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAA-MIEIEVLQQLAKHDKGGNRCV 107
           G G FG+V    D++  ++ A+K++R    IK+ + A    E ++L              
Sbjct: 10  GRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDIL-------------A 56

Query: 108 QIRN-W-------FDYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVREIARQLLECI 158
              + W       F    H+ +V E +     D +        FP +  R    +L+  +
Sbjct: 57  DADSPWIVKLYYSFQDEEHLYLVMEYMPGG--DLMNLLIRKDVFPEETARFYIAELVLAL 114

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFK--RMPKSSAIKVI 214
             +H L  IH D+KP+N+L+ +  +IK+ D+     ++  KD  Y+            V+
Sbjct: 115 DSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVL 174

Query: 215 DFGSTTYERP-DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
                  +R    N  V T  Y APEV+ G  +   CD WS+G IL E+  G   F    
Sbjct: 175 VRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPF---- 230

Query: 274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 333
                           Q    ++                                  ++L
Sbjct: 231 -----------YSDTLQETYNKIINW------------------------------KESL 249

Query: 334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLT-AREALRHPFF 372
                   + +   L+  LL  DP DRL    E   HPFF
Sbjct: 250 RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFF 288

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 82.6 bits (204), Expect = 5e-18
 Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 36/226 (15%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVR----GIK-KYREAAMI-----EIEVLQQLAKHD 100
           +G G+FG V    +    E++A+K V         K R+ +M+     EI +L++L +H+
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHE 66

Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 VQ        +H+ I  E + G S+   L  NNY +F   LVR   RQ+L+ + 
Sbjct: 67  N----IVQYLGSSLDADHLNIFLEYVPGGSVAALL--NNYGAFEETLVRNFVRQILKGLN 120

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H+  +IH D+K  N+L+ +   IK+ D+  S          K++  +S         T
Sbjct: 121 YLHNRGIIHRDIKGANILVDNKGGIKISDFGIS----------KKLEANSLS-----TKT 165

Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
              RP    +  +  + APEV+    +T   DIWS+GC++VE+ TG
Sbjct: 166 NGARPS---LQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTG 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 81.5 bits (202), Expect = 1e-17
 Identities = 79/339 (23%), Positives = 130/339 (38%), Gaps = 96/339 (28%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ----LAKHDK 101
            +   +G+G+FG+V +  D+   ++VAIK++       E A  EIE +QQ    L++   
Sbjct: 4   TLLECIGKGSFGEVYKAIDKRTNQVVAIKVID-----LEEAEDEIEDIQQEIQFLSQC-- 56

Query: 102 GGNRCVQIRNWF-----DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLL 155
              R   I  ++       +  + I+ E   G S  D L+           +  I R++L
Sbjct: 57  ---RSPYITKYYGSFLKGSK--LWIIMEYCGGGSCLDLLK---PGKLDETYIAFILREVL 108

Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H+   IH D+K  N+LL     +K+ D+  S               S+  K   
Sbjct: 109 LGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQL-----------TSTMSKRNT 157

Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
           F             V T  + APEVI   G+    DIWS+G   +EL  GE        L
Sbjct: 158 F-------------VGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEP------PL 198

Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 335
             L  M RVL  +P++    ++ +  K+ +  +                           
Sbjct: 199 SDLHPM-RVLFLIPKNNPPSLEGN--KFSKPFK--------------------------- 228

Query: 336 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                   D   L    L  DP +R +A+E L+H F  +
Sbjct: 229 --------DFVSL---CLNKDPKERPSAKELLKHKFIKK 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 81.2 bits (201), Expect = 1e-17
 Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 32/218 (14%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+GEG++G V +   +E  ++VAIK+V  +++  +  + EI +L+Q           V+ 
Sbjct: 10  KLGEGSYGSVYKAIHKETGQVVAIKVVP-VEEDLQEIIKEISILKQ-CDSP----YIVKY 63

Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
              +     + IV E  G  S+ D ++  N ++   + +  I  Q L+ + ++H    IH
Sbjct: 64  YGSYFKNTDLWIVMEYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNKKIH 122

Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+K  N+LL      K+ D+  S                        G  T     +N 
Sbjct: 123 RDIKAGNILLNEEGQAKLADFGVS------------------------GQLTDTMAKRNT 158

Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
           ++ T  + APEVI  +G+    DIWS+G   +E+  G+
Sbjct: 159 VIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGK 196

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 80.6 bits (199), Expect = 2e-17
 Identities = 68/310 (21%), Positives = 109/310 (35%), Gaps = 90/310 (29%)

Query: 67  RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL 126
           + +M+A   V  +K  R   MI+ E                ++   F  ++++ +V E L
Sbjct: 31  KSDMIAKNQVTNVKAERAIMMIQGE-----------SPYVAKLYYSFQSKDYLYLVMEYL 79

Query: 127 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK 185
            G      ++       P D  ++   +++  +  +H   +IH D+KPEN+L+  + ++K
Sbjct: 80  NGGDCASLIKTLGG--LPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLK 137

Query: 186 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLG 245
           + D+  S           R                 E       V T  Y APE ILG+G
Sbjct: 138 LTDFGLS-----------RN--------------GLENKK---FVGTPDYLAPETILGVG 169

Query: 246 WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR 305
                D WS+GC++ E   G   F                   P  +   +         
Sbjct: 170 DDKMSDWWSLGCVIFEFLFGYPPFHAET---------------PDAVFDNIL-------- 206

Query: 306 RGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA-- 363
             R++WPE      S       P   +LI +               LL  DP  RL A  
Sbjct: 207 SRRINWPEEVKEFCS-------PEAVDLINR---------------LLCMDPAKRLGANG 244

Query: 364 -REALRHPFF 372
            +E   HPFF
Sbjct: 245 YQEIKSHPFF 254

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 81.3 bits (200), Expect = 5e-17
 Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 44/225 (19%)

Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 172

Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 173 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221

Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 330
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 268

Query: 331 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
             +L     +H+   A     LL  +L  DP  R++  EAL+HP+
Sbjct: 269 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 80.0 bits (197), Expect = 7e-17
 Identities = 85/335 (25%), Positives = 143/335 (42%), Gaps = 67/335 (20%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV-----RGI--KKYREAAMIEIEVLQQLAKHDKG 102
           K+GEG++  V +   R   ++VA+K++      G+     REA+++         K  K 
Sbjct: 12  KLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLL---------KGLKH 62

Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
            N  V + +    +  +  VFE + + L  ++ ++     P + VR    QLL  +A++H
Sbjct: 63  AN-IVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYN-VRLFMFQLLRGLAYIH 120

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTY 221
              ++H DLKP+N+L+                     SY         +K+ DFG +   
Sbjct: 121 GQHILHRDLKPQNLLI---------------------SYL------GELKLADFGLARAK 153

Query: 222 ERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQ-THENLEH 277
             P Q Y   V T  YR P+V+LG   ++   DIW  GCI +E+  G+  F    +  E 
Sbjct: 154 SIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQ 213

Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 337
           L  +  VLG   +     V +    Y     L   +    R   K + + P+ ++L  Q 
Sbjct: 214 LEKIWTVLGVPTEDTWPGVSK-LPNYKPEWFL-PCKPQQLRVVWKRLSRPPKAEDLASQ- 270

Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                         +L   P DR++A++AL HP+F
Sbjct: 271 --------------MLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 79.7 bits (196), Expect = 2e-16
 Identities = 68/221 (30%), Positives = 105/221 (47%), Gaps = 36/221 (16%)

Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 179

Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228

Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 330
           ++++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 229 DHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 283

Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                +H    A     LL  +L  D + R++  EAL+HP+
Sbjct: 284 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 77.8 bits (191), Expect = 5e-16
 Identities = 88/354 (24%), Positives = 152/354 (42%), Gaps = 75/354 (21%)

Query: 50  KMGEGTFGQVLECWDRERKEM--VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           K+G GT+G V +   ++ K+    A+K + G      +A  EI +L++L    K  N   
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDEKEYALKQIEG-TGISMSACREIALLREL----KHPNVIA 62

Query: 108 QIRNWFDYRNH-ICIVFEKLGSSLYDFLR-----KNNYR--SFPIDLVREIARQLLECIA 159
             + +  + +  + ++F+     L+  ++     K N +    P  +V+ +  Q+L+ I 
Sbjct: 63  LQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIH 122

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-S 218
           ++H   ++H DLKP N+L++                          P+   +K+ D G +
Sbjct: 123 YLHANWVLHRDLKPANILVMGEG-----------------------PERGRVKIADMGFA 159

Query: 219 TTYERP-----DQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTH 272
             +  P     D + +V T  YRAPE++LG   +T   DIW++GCI  EL T E +F   
Sbjct: 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219

Query: 273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ- 331
           +        E +    P H   ++DR           DW       E I+ + + P LQ 
Sbjct: 220 Q--------EDIKTSNPFHH-DQLDRIFSVMGFPADKDW-------EDIRKMPEYPTLQK 263

Query: 332 -------------NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                          + +H       +  LLQ LL  DPT R+T+ +AL+ P+F
Sbjct: 264 DFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 77.3 bits (190), Expect = 7e-16
 Identities = 82/330 (24%), Positives = 145/330 (43%), Gaps = 60/330 (18%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA----MIEIEVLQQLAKHDKGGNR 105
           K+GEGT+  V +   +  + +VA+K +R   ++ E A    + E+ +L+ L KH      
Sbjct: 13  KLGEGTYATVFKGRSKLTENLVALKEIR--LEHEEGAPCTAIREVSLLKDL-KHAN---- 65

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAFMHDL 164
            V + +       + +VFE L   L  ++    N  S  +  V+    Q+L  +A+ H  
Sbjct: 66  IVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMS--MHNVKIFLYQILRGLAYCHRR 123

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            ++H DLKP+N+L+     +K+ D+          +  K +P           + TY   
Sbjct: 124 KVLHRDLKPQNLLINERGELKLADF--------GLARAKSVP-----------TKTYSNE 164

Query: 225 DQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
                V T  YR P+V+LG   ++   D+W VGCI  E+ +G  LF      + L ++ R
Sbjct: 165 -----VVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFR 219

Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHSA 342
           +LG   +                    WP G +S +  K+    P+ +   ++ H     
Sbjct: 220 LLGTPTEE------------------TWP-GISSNDEFKN-YNFPKYKPQPLINHAPRLD 259

Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
            +   LL   L+Y+   R++A EA++H +F
Sbjct: 260 TEGIELLTKFLQYESKKRISAEEAMKHAYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 76.7 bits (188), Expect = 9e-16
 Identities = 84/328 (25%), Positives = 155/328 (47%), Gaps = 51/328 (15%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE--AAMIEIEVLQQLAKHDKGGNRCV 107
           K+GEG++  V +   +   ++VA+K++R  ++      A+ E  +L+ L KH       V
Sbjct: 12  KLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGL-KHAN----IV 66

Query: 108 QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
            + +    +  + +VFE + + L  ++ K+     P + V+    QLL  ++++H   ++
Sbjct: 67  LLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHP-ENVKLFLFQLLRGLSYIHQRYIL 125

Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DLKP+N+L+  +  +K+ D+               + ++ ++      S TY      
Sbjct: 126 HRDLKPQNLLISDTGELKLADFG--------------LARAKSVP-----SHTYSNE--- 163

Query: 228 YIVSTRHYRAPEVILGLGWTYPC-DIWSVGCILVELCTGEALFQTHENLE-HLAMMERVL 285
             V T  YR P+V+LG      C D+W VGCI VE+  G A F   ++++  L  +  VL
Sbjct: 164 --VVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVL 221

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
           G   +     V  H+  + +      PE    R ++ S   L +  N  + +V+H+    
Sbjct: 222 GTPNEDTWPGV--HSLPHFK------PE----RFTLYSPKNLRQAWNK-LSYVNHA---- 264

Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFT 373
             L   LL+  P +RL+A+ AL H +F+
Sbjct: 265 EDLASKLLQCFPKNRLSAQAALSHEYFS 292

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 75.9 bits (186), Expect = 2e-15
 Identities = 88/349 (25%), Positives = 151/349 (43%), Gaps = 65/349 (18%)

Query: 50  KMGEGTFGQVLECWDRERKEM--VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           K+G GT+G V +   ++ K+    A+K + G      +A  EI +L++L KH       +
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDDRDYALKQIEG-TGISMSACREIALLREL-KHPN----VI 61

Query: 108 QIRNWF--DYRNHICIVFEKLGSSLYDFLR-----KNNYR--SFPIDLVREIARQLLECI 158
            ++  F       + ++F+     L+  ++     K N +    P  +V+ +  Q+L+ I
Sbjct: 62  SLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI 121

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 217
            ++H   ++H DLKP N+L++                          P+   +K+ D G 
Sbjct: 122 HYLHANWVLHRDLKPANILVMGEG-----------------------PERGRVKIADMGF 158

Query: 218 STTYERP-----DQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQT 271
           +  +  P     D + +V T  YRAPE++LG   +T   DIW++GCI  EL T E +F  
Sbjct: 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218

Query: 272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR-- 329
            +        E +    P H   ++DR           DW +     E   ++MK  R  
Sbjct: 219 RQ--------EDIKTSNPYHH-DQLDRIFNVMGFPADKDWEDIKKMPEH-STLMKDFRRN 268

Query: 330 ------LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                 L   + +H         HLLQ LL  DP  R+T+ +A++ P+F
Sbjct: 269 TYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 74.7 bits (183), Expect = 3e-15
 Identities = 68/265 (25%), Positives = 120/265 (45%), Gaps = 39/265 (14%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAKHDKGGN 104
           +G+G FG+V  C+D +    +A+K V+         K   A   EI++L+ L        
Sbjct: 10  LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHE----- 64

Query: 105 RCVQIRNWF-DYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           R VQ      D       +F +   G S+ D L+  +Y +   ++ R+  RQ+LE ++++
Sbjct: 65  RIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLK--SYGALTENVTRKYTRQILEGVSYL 122

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   ++H D+K  N+L  S   +K+ D+ +S          KR+      + I    T  
Sbjct: 123 HSNMIVHRDIKGANILRDSVGNVKLGDFGAS----------KRL------QTICLSGTGM 166

Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
           +      +  T ++ +PEVI G G+    DIWSVGC +VE+ T +  +   E +   A+ 
Sbjct: 167 KS-----VTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA--AIF 219

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRR 306
           +    P    +   V  H   +++R
Sbjct: 220 KIATQPTNPVLPPHVSDHCRDFLKR 244

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 74.9 bits (185), Expect = 4e-15
 Identities = 74/337 (21%), Positives = 128/337 (37%), Gaps = 93/337 (27%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDK 101
           +    +G G+FG+V+    +   +  A+KI+    I K ++   +  E  +LQ + +H  
Sbjct: 4   EFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHP- 61

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                    ++ D  N + +V E + G  L+  LRK+    FP  + R  A Q++  + +
Sbjct: 62  --FLVNLYGSFQDDSN-LYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEY 116

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H L +++ DLKPEN+LL S  Y                           IK+ DFG   
Sbjct: 117 LHSLDIVYRDLKPENLLLDSDGY---------------------------IKITDFGFAK 149

Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
             +     +  T  Y APE+IL  G+    D W++G ++ E+  G   F        + +
Sbjct: 150 RVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDD---NPIQI 206

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
            E++L                     G++ +P                            
Sbjct: 207 YEKILE--------------------GKVRFP-----------------------SFFS- 222

Query: 341 SAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
              D   L++ LL+ D T RL        +   HP+F
Sbjct: 223 --PDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWF 257

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 74.4 bits (183), Expect = 6e-15
 Identities = 70/268 (26%), Positives = 111/268 (41%), Gaps = 67/268 (25%)

Query: 113 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDL 171
           F+ + H+C+V E + G      L+  N  + P+D+ R    + +  + ++H+  ++H DL
Sbjct: 70  FETKRHLCMVMEYVEGGDCATLLK--NIGALPVDMARMYFAETVLALEYLHNYGIVHRDL 127

Query: 172 KPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
           KP+N+L+ S  +IK+ D+   K  L +   + Y   + K            T E  D+  
Sbjct: 128 KPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKD-----------TREFLDKQ- 175

Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 288
           +  T  Y APEVIL  G+  P D W++G IL E   G   F                G  
Sbjct: 176 VCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPF---------------FGDT 220

Query: 289 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 348
           P+ +  +        V    ++WPEG  +         LP               D   L
Sbjct: 221 PEELFGQ--------VISDDIEWPEGDEA---------LP--------------ADAQDL 249

Query: 349 LQGLLRYDPTDRL---TAREALRHPFFT 373
           +  LLR +P +RL    A E  +H FF 
Sbjct: 250 ISRLLRQNPLERLGTGGAFEVKQHRFFL 277

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 73.6 bits (180), Expect = 7e-15
 Identities = 68/269 (25%), Positives = 123/269 (45%), Gaps = 47/269 (17%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAKHDKGGN 104
           +G+G FG+V  C+D +    +A K V+         K   A   EI++L+ L +H+    
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHE---- 64

Query: 105 RCVQIRNWFDYRNH----ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
           R VQ       R+     + I  E + G S+ D L+   Y +    + R+  RQ+LE ++
Sbjct: 65  RIVQYYGCL--RDRAEKTLTIFMEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMS 120

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   ++H D+K  N+L  S+  +K+ D+ +S          KR+      + I    T
Sbjct: 121 YLHSNMIVHRDIKGANILRDSAGNVKLGDFGAS----------KRL------QTICMSGT 164

Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
                    +  T ++ +PEVI G G+    D+WS+GC +VE+ T +  +  +E +  + 
Sbjct: 165 GIRS-----VTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIF 219

Query: 280 MM--ERVLGPLPQHMLKRVDRHAEKYVRR 306
            +  +     LP H    +  HA  ++  
Sbjct: 220 KIATQPTNPQLPSH----ISEHARDFLGC 244

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 74.4 bits (183), Expect = 8e-15
 Identities = 78/346 (22%), Positives = 129/346 (37%), Gaps = 94/346 (27%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDK 101
           +I +++G+G +GQV     ++  E+VA+K +    + K  E   +  E ++L    K + 
Sbjct: 4   QILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTT-TKSE- 61

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                V++   F    ++ +  E + G      L  NN      D  R    ++ E +  
Sbjct: 62  ---WLVKLLYAFQDDEYLYLAMEYVPGGDFRTLL--NNLGVLSEDHARFYMAEMFEAVDA 116

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H+L  IH DLKPEN L+ +S +IK+                            DFG + 
Sbjct: 117 LHELGYIHRDLKPENFLIDASGHIKL---------------------------TDFGLSK 149

Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF------QTHEN 274
                 N +V +  Y APEV+ G G+ +  D WS+GC+L E   G   F      +T EN
Sbjct: 150 GIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWEN 209

Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           L++                               L  P     R ++             
Sbjct: 210 LKYWKET---------------------------LQRPVYDDPRFNLS------------ 230

Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR-HPFFTRDHLRR 379
               D +   +T L+      DP+ R  + E ++ HPFF       
Sbjct: 231 ----DEAWDLITKLIN-----DPSRRFGSLEDIKNHPFFKEVDWNE 267

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 73.2 bits (180), Expect = 1e-14
 Identities = 69/335 (20%), Positives = 120/335 (35%), Gaps = 79/335 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR---EAAMIEIEVLQQLAKHDKG 102
           ++   +G G    V         E VAIK +  ++K +   +    E++ + Q   H   
Sbjct: 4   ELIEVIGVGATAVVYAAICLPNNEKVAIKRID-LEKCQTSVDELRKEVQAMSQCN-HPN- 60

Query: 103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLR-KNNYRSFPIDLVREIARQLLECIAF 160
               V+    F   + + +V   L G SL D ++           ++  + +++L+ + +
Sbjct: 61  ---VVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEY 117

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
           +H    IH D+K  N+LL     +K+ D+   +SL    D +   R              
Sbjct: 118 LHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVR-------------- 163

Query: 219 TTYERPDQNYIVSTRHYRAPEVI-LGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
                      V T  + APEV+    G+ +  DIWS G   +EL TG A +  +  ++ 
Sbjct: 164 --------KTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK- 214

Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 337
             +M  +    P           +KY            + R+ I                
Sbjct: 215 -VLMLTLQNDPPSL---ETGADYKKY----------SKSFRKMISLC------------- 247

Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                          L+ DP+ R TA E L+H FF
Sbjct: 248 ---------------LQKDPSKRPTAEELLKHKFF 267

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 72.2 bits (178), Expect = 2e-14
 Identities = 53/236 (22%), Positives = 87/236 (36%), Gaps = 55/236 (23%)

Query: 46  KIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKH 99
            +  K+GEG FG+V +         ++  VA+K ++     ++      E  ++++L  H
Sbjct: 2   TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKL-DH 60

Query: 100 D-----KGGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIAR 152
                  G   C +          + IV E    G  L D+LRKN  +   +  +   A 
Sbjct: 61  PNIVKLLGV--CTE-------EEPLMIVMEYMPGGD-LLDYLRKNRPKELSLSDLLSFAL 110

Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+   + ++     IH DL   N L V    +                          +K
Sbjct: 111 QIARGMEYLESKNFIHRDLAARNCL-VGENLV--------------------------VK 143

Query: 213 VIDFGSTTYERPDQNYIVSTRH--YR--APEVILGLGWTYPCDIWSVGCILVELCT 264
           + DFG +     D  Y V       R  APE +    +T   D+WS G +L E+ T
Sbjct: 144 ISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFT 199

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 71.8 bits (176), Expect = 3e-14
 Identities = 71/248 (28%), Positives = 106/248 (42%), Gaps = 53/248 (21%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G+GT+G V    D   +  +AIK +   +  R    +  E+   L  + K  N  VQ  
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIP-ERDSRYVQPLHEEIA--LHSYLKHRN-IVQYL 71

Query: 111 NWFDYRNHICIVFEKL-GSSLYDFLR------KNNYRSFPIDLVREIARQLLECIAFMHD 163
                     I  E++ G SL   LR      K+N        +    +Q+LE + ++HD
Sbjct: 72  GSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNE-----QTIIFYTKQILEGLKYLHD 126

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             ++H D+K +NVL+                    ++Y      S  +K+ DFG  T +R
Sbjct: 127 NQIVHRDIKGDNVLV--------------------NTY------SGVVKISDFG--TSKR 158

Query: 224 -----PDQNYIVSTRHYRAPEVI-LGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                P       T  Y APEVI  G  G+  P DIWS+GC +VE+ TG+  F   E  E
Sbjct: 159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPF--IELGE 216

Query: 277 HLAMMERV 284
             A M +V
Sbjct: 217 PQAAMFKV 224

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 71.4 bits (176), Expect = 3e-14
 Identities = 61/301 (20%), Positives = 106/301 (35%), Gaps = 82/301 (27%)

Query: 46  KIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKH 99
           ++  K+GEG FG+V +          +  VA+K ++    ++ RE  + E  ++++L  H
Sbjct: 2   ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKL-SH 60

Query: 100 DK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIAR 152
                  G   C Q          + IV E    G  L DFLRK+      +  + ++A 
Sbjct: 61  PNIVRLLGV--CTQ-------GEPLYIVTEYMPGGD-LLDFLRKHG-EKLTLKDLLQMAL 109

Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+ + + ++     +H DL   N L+  +  +K+ D                        
Sbjct: 110 QIAKGMEYLESKNFVHRDLAARNCLVTENLVVKISD------------------------ 145

Query: 213 VIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 267
              FG +     D  Y           + APE +    +T   D+WS G +L E+ T   
Sbjct: 146 ---FGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGE 202

Query: 268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSVMK 326
                              P P    + V     + +  G RL  PE     + +  +M 
Sbjct: 203 Q------------------PYPGMSNEEV----LELLEDGYRLPRPENCP--DELYELML 238

Query: 327 L 327
            
Sbjct: 239 Q 239

Length = 258

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 72.4 bits (178), Expect = 4e-14
 Identities = 62/237 (26%), Positives = 105/237 (44%), Gaps = 34/237 (14%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ-------LAKHDKGGN 104
           G G FG+V     ++   + A+K +R      ++ M+E E +         LA+ D    
Sbjct: 10  GRGAFGEVRLVQKKDTGHIYAMKKLR------KSEMLEKEQVAHVRAERDILAEAD--NP 61

Query: 105 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVR-EIARQLLECIAFMH 162
             V++   F   N++ ++ E L G  +   L K    +F  +  R  IA  +L  I  +H
Sbjct: 62  WVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMK--KDTFTEEETRFYIAETIL-AIDSIH 118

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYK--SSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
            L  IH D+KP+N+LL +  +IK+ D+   + L     + +++ +  +     +DF S  
Sbjct: 119 KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKP 178

Query: 221 YERPD--QNY----------IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                  + +           V T  Y APEV L  G+   CD WS+G I+ E+  G
Sbjct: 179 MSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 71.4 bits (175), Expect = 4e-14
 Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 43/231 (18%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
            K+GEG+FG+ +    +E  +   IK   I +   K RE +  E+ VL  + KH      
Sbjct: 6   KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNM-KHPN---- 60

Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            VQ +  F+   ++ IV +   G  LY  +       FP D + +   Q+   +  +HD 
Sbjct: 61  IVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR 120

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-----ST 219
            ++H D+K +N+ L                            K   IK+ DFG     ++
Sbjct: 121 KILHRDIKSQNIFLT---------------------------KDGTIKLGDFGIARVLNS 153

Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 270
           T E       + T +Y +PE+     +    DIW++GC+L E+CT +  F+
Sbjct: 154 TVEL--ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFE 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 71.2 bits (174), Expect = 4e-14
 Identities = 62/224 (27%), Positives = 109/224 (48%), Gaps = 39/224 (17%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV------RGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           +G G FG+V  C+D +    +A+K V      +   K   A   EI++L+ L +HD    
Sbjct: 10  LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHD---- 64

Query: 105 RCVQ----IRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
           R VQ    +R+  + +  I + +   G S+ D L+   Y +   ++ R   RQ+L+ +++
Sbjct: 65  RIVQYYGCLRDPEEKKLSIFVEYMP-GGSIKDQLKA--YGALTENVTRRYTRQILQGVSY 121

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   ++H D+K  N+L  S+  +K+ D+ +S          KR      I+ I    T 
Sbjct: 122 LHSNMIVHRDIKGANILRDSAGNVKLGDFGAS----------KR------IQTICMSGTG 165

Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
            +      +  T ++ +PEVI G G+    D+WSV C +VE+ T
Sbjct: 166 IKS-----VTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLT 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 70.8 bits (173), Expect = 5e-14
 Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 33/245 (13%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIE-VLQQLAKHDKGGNRCVQI 109
           +GEG+FG+ L        +  A+K +R  K          E VL    KH       V  
Sbjct: 8   VGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPN----IVAF 63

Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
           +  F+   H+ IV E   G  L   ++    + FP D + +   Q+   +  +H+  ++H
Sbjct: 64  KESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLH 123

Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+K +N+ L  +  +K+ D+ S+       +Y                + TY       
Sbjct: 124 RDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY----------------ACTY------- 160

Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH--ENLEHLAMMERVLG 286
            V T +Y  PE+   + +    DIWS+GCIL ELCT +  FQ +  +NL  L + +    
Sbjct: 161 -VGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLI-LKVCQGSYK 218

Query: 287 PLPQH 291
           PLP H
Sbjct: 219 PLPSH 223

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 70.7 bits (173), Expect = 7e-14
 Identities = 38/161 (23%), Positives = 81/161 (50%), Gaps = 26/161 (16%)

Query: 138 NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSS-EYIKVPDYKSSLHTP 196
            Y +F   ++     QLL  ++++H+  +IH D+K  N+L+ S+ + +++ D+       
Sbjct: 96  KYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADF------- 148

Query: 197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVG 256
                       +A ++   G+   E   Q  ++ T  + APEV+ G  +   CD+WSVG
Sbjct: 149 -----------GAAARLAAKGTGAGEFQGQ--LLGTIAFMAPEVLRGEQYGRSCDVWSVG 195

Query: 257 CILVELCTGEALFQTHENLEHLAMMERVLG-----PLPQHM 292
           C+++E+ T +  +   ++  HLA++ ++        +P+H+
Sbjct: 196 CVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHL 236

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 70.4 bits (173), Expect = 7e-14
 Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 44/226 (19%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
            ++G G  G V +   R   +++A+K +R    +  ++  + E+++L           +C
Sbjct: 7   GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILH----------KC 56

Query: 107 -----VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
                V     F     I I  E +     D + K      P  ++ +IA  +L+ + ++
Sbjct: 57  NSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYL 116

Query: 162 H-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           H    +IH D+KP N+L+ S   IK+ D+  S           ++  S A          
Sbjct: 117 HEKHKIIHRDVKPSNILVNSRGQIKLCDFGVS----------GQLVNSLA---------- 156

Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
                    V T  Y APE I G  ++   DIWS+G  L+EL TG 
Sbjct: 157 ------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGR 196

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 70.6 bits (173), Expect = 9e-14
 Identities = 78/340 (22%), Positives = 128/340 (37%), Gaps = 96/340 (28%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMI-----EIEVLQQLAKH 99
           +G+GT+G+V    +    EM+A+K V       G    R+  M+     EIE L+ L   
Sbjct: 9   IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68

Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           +      VQ   +     ++ I  E + G S+   LR   Y  F   LVR    Q+LE +
Sbjct: 69  N-----IVQYLGFETTEEYLSIFLEYVPGGSIGSCLR--TYGRFEEQLVRFFTEQVLEGL 121

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
           A++H   ++H DLK +N+L+ +    K+ D+  S  +                       
Sbjct: 122 AYLHSKGILHRDLKADNLLVDADGICKISDFGISKKS----------------------D 159

Query: 219 TTYERPDQNYIVSTRHYRAPEVI--LGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
             Y+      +  +  + APEVI     G++   DIWS+GC+++E+  G    +   + E
Sbjct: 160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR---RPWSDEE 216

Query: 277 HLAMM-----ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 331
            +A M     +R   P+P  +   +               P                   
Sbjct: 217 AIAAMFKLGNKRSAPPIPPDVSMNLS--------------PVAL---------------- 246

Query: 332 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                            L      +P +R TARE L+HPF
Sbjct: 247 ---------------DFLNACFTINPDNRPTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 70.5 bits (173), Expect = 1e-13
 Identities = 78/335 (23%), Positives = 125/335 (37%), Gaps = 83/335 (24%)

Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           I  ++G+G FG+V +   +E     A KI++   ++  E  M+EI++L +  KH      
Sbjct: 9   IIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSEC-KHPN---- 63

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            V +   + Y N + I+ E       D +     R      +R + RQ+LE + F+H   
Sbjct: 64  IVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHK 123

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IH DLK  N+LL     +K+ D+  S                                 
Sbjct: 124 VIHRDLKAGNILLTLDGDVKLADFGVS------------------------AKNKSTLQK 159

Query: 226 QNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
           ++  + T ++ APEV+         + Y  DIWS+G  L+EL   E     H  L  + +
Sbjct: 160 RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEP---PHHELNPMRV 216

Query: 281 MERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
           + ++L    P                   LD P   +S                      
Sbjct: 217 LLKILKSEPPT------------------LDQPSKWSS---------------------- 236

Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                    L+  L  DP DR TA E L+HPF + 
Sbjct: 237 ----SFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 70.4 bits (172), Expect = 1e-13
 Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 35/223 (15%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-EAAMIEIEVLQQLAKHDKGGN 104
           +I  ++G+G FG+V +  ++E   + A K++    +   E  M+EIE+L           
Sbjct: 15  EIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHP----- 69

Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
             V++   F +   + I+ E       D +     R      ++ I RQ+LE + ++H +
Sbjct: 70  YIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM 129

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +IH DLK  NVLL     IK+ D+  S    K                      T +R 
Sbjct: 130 KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK----------------------TLQRR 167

Query: 225 DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVEL 262
           D    + T ++ APEV++        + Y  DIWS+G  L+E+
Sbjct: 168 DS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 208

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 69.8 bits (171), Expect = 1e-13
 Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 33/218 (15%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           +G+G FG+       E   +V  K V   R  +K R  A+ EI +L  L +H       +
Sbjct: 8   LGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLL-QHPN----II 62

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
              N F   N + I  E   G +LYD + +   + F  ++V     Q++  ++++H   +
Sbjct: 63  AYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGI 122

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H D+K  N+ L  +  IK+ D+  S    K       M ++                  
Sbjct: 123 LHRDIKTLNIFLTKAGLIKLGDFGIS----KILGSEYSMAET------------------ 160

Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
             +V T +Y +PE+  G+ + +  DIW++GC+L EL T
Sbjct: 161 --VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLT 196

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 70.2 bits (172), Expect = 1e-13
 Identities = 68/332 (20%), Positives = 129/332 (38%), Gaps = 85/332 (25%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYR--EAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G FG+V  C  +   +M A K +  + +KK +  + A+ E ++L++++         
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSR-----FI 55

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V +   F+ ++ +C+V   + G  L   +       FP       A Q++  +  +H   
Sbjct: 56  VSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR 115

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ DLKPENVLL     +++ D   ++                       G     R  
Sbjct: 116 IVYRDLKPENVLLDDHGNVRISDLGLAVELKG-------------------GKKIKGR-- 154

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
                 T  Y APEV+ G  + +  D +++GC L E+  G + F+  +            
Sbjct: 155 ----AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRK------------ 198

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                   ++V++   K               R +++  ++ P          D  + + 
Sbjct: 199 --------EKVEKEELK---------------RRTLEMAVEYP----------DKFSPEA 225

Query: 346 THLLQGLLRYDPTDRL-----TAREALRHPFF 372
             L + LL+ DP  RL     +A E   HP F
Sbjct: 226 KDLCEALLQKDPEKRLGCRGGSADEVREHPLF 257

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 69.6 bits (171), Expect = 1e-13
 Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 38/234 (16%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHDKGG 103
           ++  ++G GT+G V +  D    E+VAIK+++ ++   +  +I  EI +L++  +H    
Sbjct: 6   ELIQRIGSGTYGDVYKARDIATGELVAIKVIK-LEPGDDFEIIQQEISMLKE-CRH---- 59

Query: 104 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
              V     +  R+ + IV E   G SL D  +           +  + R+ L+ +A++H
Sbjct: 60  PNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLH 118

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
           +   IH D+K  N+LL     +K+ D+  S      ++  KR                  
Sbjct: 119 ETGKIHRDIKGANILLTEDGDVKLADFGVS--AQLTATIAKR------------------ 158

Query: 223 RPDQNYIVSTRHYRAPEVI---LGLGWTYPCDIWSVGCILVELCTGE-ALFQTH 272
                  + T ++ APEV       G+   CDIW++G   +EL   +  +F  H
Sbjct: 159 ----KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 69.7 bits (170), Expect = 2e-13
 Identities = 83/330 (25%), Positives = 131/330 (39%), Gaps = 87/330 (26%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           ++G+G+FG+V +  D   KE+VAIKI+       E A  EIE +QQ        +     
Sbjct: 11  RIGKGSFGEVYKGIDNRTKEVVAIKIID-----LEEAEDEIEDIQQEITVLSQCDSPYIT 65

Query: 110 RNWFDY--RNHICIVFEKLGS-SLYDFLRKNNYRSFPID--LVREIARQLLECIAFMHDL 164
           R +  Y     + I+ E LG  S  D L+       P++   +  I R++L+ + ++H  
Sbjct: 66  RYYGSYLKGTKLWIIMEYLGGGSALDLLKPG-----PLEETYIATILREILKGLDYLHSE 120

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH D+K  NVLL     +K+ D+  +                        G  T  + 
Sbjct: 121 RKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLTDTQI 156

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
            +N  V T  + APEVI    + +  DIWS+G   +EL  GE     + +L  +    RV
Sbjct: 157 KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEP---PNSDLHPM----RV 209

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
           L  +P++                                    P L+    Q+    +  
Sbjct: 210 LFLIPKN----------------------------------SPPTLEG---QY----SKP 228

Query: 345 LTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
               ++  L  DP  R TA+E L+H F TR
Sbjct: 229 FKEFVEACLNKDPRFRPTAKELLKHKFITR 258

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 68.9 bits (168), Expect = 3e-13
 Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 35/223 (15%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-EAAMIEIEVLQQLAKHDKGGN 104
           +I  ++G+G FG+V +  ++E   + A K++    +   E  M+EI++L      +    
Sbjct: 8   EIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN---- 63

Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
             V++ + F Y N++ I+ E       D +     R      +R + +Q LE + ++H+ 
Sbjct: 64  -IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN 122

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +IH DLK  N+L      IK+ D+  S    +                      T +R 
Sbjct: 123 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR----------------------TIQRR 160

Query: 225 DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVEL 262
           D    + T ++ APEV++        + Y  D+WS+G  L+E+
Sbjct: 161 DS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 68.8 bits (168), Expect = 3e-13
 Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 40/250 (16%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ---LAKHDKGGNRCV 107
           +G+G +G V  C    + +++A+K V        AA  E E LQ+   L K  K  N   
Sbjct: 8   LGKGAYGTVY-CGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQ 66

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
            +    D  N I I  E + G S+   L  N +   P  +  +  +Q+L+ +A++H+ C+
Sbjct: 67  YLGTCLD-DNTISIFMEFVPGGSISSIL--NRFGPLPEPVFCKYTKQILDGVAYLHNNCV 123

Query: 167 IHTDLKPENVLLVSSEYIKVPDYK-------SSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           +H D+K  NV+L+ +  IK+ D+          LH    S+  K M              
Sbjct: 124 VHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTH-SNMLKSMH------------- 169

Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
                       T ++ APEVI   G+    DIWS+GC + E+ TG+    + + L  + 
Sbjct: 170 -----------GTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMF 218

Query: 280 MMERVLGPLP 289
            +    G +P
Sbjct: 219 YIGAHRGLMP 228

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 68.5 bits (168), Expect = 4e-13
 Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 74/254 (29%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD----------K 101
           GEGT+G+V +   ++  ++VAIKI+  I+   E    E  +L++ + H           K
Sbjct: 15  GEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIK 74

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDF---LRKNNYRSFPIDLVREIARQLLEC 157
                   + W         V E   G S+ D    LRK   +    + +  I R+ L  
Sbjct: 75  KNPPGNDDQLWL--------VMELCGGGSVTDLVKGLRKKG-KRLKEEWIAYILRETLRG 125

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           +A++H+  +IH D+K +N+LL                            K++ +K++DFG
Sbjct: 126 LAYLHENKVIHRDIKGQNILLT---------------------------KNAEVKLVDFG 158

Query: 218 ------STTYERPDQNYIVSTRHYRAPEVI-----LGLGWTYPCDIWSVGCILVELCTGE 266
                 ST   R   N  + T ++ APEVI         +    D+WS+G   +EL  G+
Sbjct: 159 VSAQLDSTLGRR---NTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGK 215

Query: 267 ----------ALFQ 270
                     ALF+
Sbjct: 216 PPLCDMHPMRALFK 229

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 68.0 bits (167), Expect = 5e-13
 Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 44/245 (17%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMI--EIEVLQQLAKHDKG 102
           ++   +G+G+FG V +   +   +++  K I  G    +E   +  E+ +L++L KH   
Sbjct: 3   EVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILREL-KHPN- 60

Query: 103 GNRCVQIRNWF-DYRNH-ICIVFEKLG----SSLYDFLRKNNYRSFPIDLVREIARQLLE 156
               V+  +   D  N  + IV E       + L    +K   +    + +  I  QLL 
Sbjct: 61  ---IVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKER-KYIEEEFIWRILTQLLL 116

Query: 157 CIAFMHDLC-----MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
            +   H+       ++H DLKP N+ L ++  +K+ D+  +          K +   S  
Sbjct: 117 ALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA----------KILGHDS-- 164

Query: 212 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
                 + TY        V T +Y +PE +  + +    DIWS+GC++ ELC     F  
Sbjct: 165 ----SFAKTY--------VGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTA 212

Query: 272 HENLE 276
              L+
Sbjct: 213 RNQLQ 217

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 68.7 bits (168), Expect = 7e-13
 Identities = 78/334 (23%), Positives = 126/334 (37%), Gaps = 94/334 (28%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAA--MIEIEVLQQLAKHDKGGNRC 106
           +G+GTFG+V+   ++   +  A+KI++   I    E A  + E  VLQ   +H       
Sbjct: 3   LGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQN-TRHP----FL 57

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++  F   + +C V E   G  L+  L +   R F  D  R    +++  + ++H   
Sbjct: 58  TALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCD 115

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ DLK EN++L    +IK+ D+               + K      I  G+T      
Sbjct: 116 VVYRDLKLENLMLDKDGHIKITDFG--------------LCKEG----ISDGATM----- 152

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 283
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 153 -KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 211

Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
           +                                         + PR   L        + 
Sbjct: 212 I-----------------------------------------RFPR--TL--------SP 220

Query: 344 DLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
           +   LL GLL+ DP  RL      A+E + H FF
Sbjct: 221 EAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFF 254

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 67.3 bits (164), Expect = 1e-12
 Identities = 82/332 (24%), Positives = 126/332 (37%), Gaps = 83/332 (25%)

Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKG 102
           +  ++G+G+FG V    D++      +K+++ I        E      E  Q L+K D  
Sbjct: 4   LQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEA-QLLSKLDHP 62

Query: 103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLR--KNNYRSFPIDLVREIARQLLECIA 159
               V+    F  R+  CI+ E   G  L   L   K+  ++   + V E   QLL  + 
Sbjct: 63  A--IVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVH 120

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           +MH   ++H DLK +N+ L  +  +K+ D+  S           R+   S     D  +T
Sbjct: 121 YMHQRRILHRDLKAKNIFL-KNNLLKIGDFGVS-----------RLLMGSC----DLATT 164

Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
                       T +Y +PE +   G+    DIWS+GCIL E+C     F+    L    
Sbjct: 165 ---------FTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS--V 213

Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
           ++  V GP P                      PE               R  N IMQ   
Sbjct: 214 VLRIVEGPTPS--------------------LPE------------TYSRQLNSIMQS-- 239

Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                       +L  DP+ R +A E LR+PF
Sbjct: 240 ------------MLNKDPSLRPSAAEILRNPF 259

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 67.4 bits (164), Expect = 1e-12
 Identities = 61/222 (27%), Positives = 98/222 (44%), Gaps = 39/222 (17%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ----LAKHDKGGNR 105
           ++G+G+FG+V +  D   +++VAIKI+       E A  EIE +QQ    L++ D     
Sbjct: 11  RIGKGSFGEVFKGIDNRTQQVVAIKIID-----LEEAEDEIEDIQQEITVLSQCDS--PY 63

Query: 106 CVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
             +    +     + I+ E LG  S  D LR   +  F I     + +++L+ + ++H  
Sbjct: 64  VTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQI---ATMLKEILKGLDYLHSE 120

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH D+K  NVLL     +K+ D+  +                        G  T  + 
Sbjct: 121 KKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLTDTQI 156

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
            +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 67.7 bits (165), Expect = 1e-12
 Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 39/258 (15%)

Query: 51  MGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           +G G+FG+V L  +  E    VAIK     K  ++  +  +   +++  +      CV +
Sbjct: 38  LGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH-PFCVNL 96

Query: 110 RNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
              F   +++ +V E  +G   + FLR+N  + FP D+    A Q++    ++  L +++
Sbjct: 97  YGSFKDESYLYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVY 154

Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DLKPEN+LL    +IK+ D+  +                   KV+D  + TY       
Sbjct: 155 RDLKPENLLLDKDGFIKMTDFGFA-------------------KVVD--TRTYT------ 187

Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG-------EALFQTHENLEHLAMM 281
           +  T  Y APE++L +G     D W++G  + E+  G       E L    + LE +   
Sbjct: 188 LCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYF 247

Query: 282 ERVLGPLPQHMLKRVDRH 299
            + L    +H++K++  H
Sbjct: 248 PKFLDNNCKHLMKKLLSH 265

Length = 340

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 66.8 bits (163), Expect = 2e-12
 Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 43/232 (18%)

Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKGG 103
           I +K+G+G+FG V +   +  K + A+K   + +  ++ RE A+ E  VL +L       
Sbjct: 4   ILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKL------- 56

Query: 104 NRCVQIRNW--FDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
           +    IR +  F  +  + IV E      L+  L+    R  P D V     Q+L  +A 
Sbjct: 57  DSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAH 116

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   ++H D+K  N+ L    Y  V                         K+ D G   
Sbjct: 117 LHSKKILHRDIKSLNLFL--DAYDNV-------------------------KIGDLGVAK 149

Query: 221 YERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
               + N+   IV T +Y +PE+     +    D+W++G +L E CTG+  F
Sbjct: 150 LLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPF 201

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 66.0 bits (162), Expect = 2e-12
 Identities = 54/236 (22%), Positives = 88/236 (37%), Gaps = 56/236 (23%)

Query: 46  KIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKH 99
            +  K+GEG FG+V +        ++K  VA+K ++     ++      E  ++++L  H
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKL-DH 60

Query: 100 D-----KGGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIAR 152
                  G   C +          + IV E  + G  L  +LRKN  +    DL+   A 
Sbjct: 61  PNVVKLLGV--CTE-------EEPLYIVMEYMEGGD-LLSYLRKNRPKLSLSDLL-SFAL 109

Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+   + ++     IH DL   N L V    +                          +K
Sbjct: 110 QIARGMEYLESKNFIHRDLAARNCL-VGENLV--------------------------VK 142

Query: 213 VIDFGSTTYERPDQNYIVSTRH--YR--APEVILGLGWTYPCDIWSVGCILVELCT 264
           + DFG +     D  Y         R  APE +    +T   D+WS G +L E+ T
Sbjct: 143 ISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFT 198

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 67.3 bits (164), Expect = 2e-12
 Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 45/259 (17%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD---KGGNRCV 107
           +G G FG+V      + K + A+K +R     ++  ++  +V    A+ D   +  N  V
Sbjct: 9   LGIGAFGEVCLARKVDTKALYAMKTLR-----KKDVLLRNQVAHVKAERDILAEADNEWV 63

Query: 108 QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRS-------FPIDLVREIARQLLECIAF 160
            +R ++ +++   + F      + D++   +  S       FP DL R    +L   +  
Sbjct: 64  -VRLYYSFQDKDNLYF------VMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVES 116

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPD---------------YKSSLHTPKDSSYFKRM 205
           +H +  IH D+KP+N+L+    +IK+ D               Y+S  H  +DS  F   
Sbjct: 117 VHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNE 176

Query: 206 PKSSA-------IKVIDF-GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC 257
               A       +K ++   +  ++R   + +V T +Y APEV+L  G+T  CD WSVG 
Sbjct: 177 WGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236

Query: 258 ILVELCTGEALFQTHENLE 276
           IL E+  G+  F     LE
Sbjct: 237 ILYEMLVGQPPFLAQTPLE 255

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 66.2 bits (161), Expect = 3e-12
 Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 38/262 (14%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+GEG+ G V    ++   + VA+K +   K+ R   +    V+ +   H+      V +
Sbjct: 29  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHEN----VVDM 84

Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +   + + +V E L G +L D +          + +  +   +L  ++++H+  +IH
Sbjct: 85  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIATVCLSVLRALSYLHNQGVIH 141

Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+K +++LL S   IK+ D+       K                        E P +  
Sbjct: 142 RDIKSDSILLTSDGRIKLSDFGFCAQVSK------------------------EVPKRKS 177

Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 288
           +V T ++ APEVI  L +    DIWS+G +++E+  GE     + N   L  M R+   L
Sbjct: 178 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP---PYFNEPPLQAMRRIRDNL 234

Query: 289 PQHMLKRVDRHAEKYVRRGRLD 310
           P  +    D H    V RG LD
Sbjct: 235 PPRV---KDSHKVSSVLRGFLD 253

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 66.8 bits (163), Expect = 3e-12
 Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 34/204 (16%)

Query: 138 NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHT 195
            Y +F  D+ R    + +  I  +H L  IH D+KP+N+L+    +IK+ D+  S   H 
Sbjct: 94  KYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153

Query: 196 PKDSSYFKRMPKSSAIK---------VIDFGSTTYERPDQ------------NYIVSTRH 234
             DS+Y++++ +  + K          +D  + T    DQ               V T  
Sbjct: 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPD 213

Query: 235 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF---QTHENL-------EHLAMMERV 284
           Y APE+ L  G+   CD WS+G I+ E   G   F    +HE         E L   + +
Sbjct: 214 YIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDI 273

Query: 285 -LGPLPQHMLKRVDRHAEKYVRRG 307
            L    + +++R+  +AE  + RG
Sbjct: 274 HLSVEAEDLIRRLITNAENRLGRG 297

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 66.3 bits (161), Expect = 3e-12
 Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 55/230 (23%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ----LAKHDKG--- 102
           K+G+G+FG+V +  D   +++VAIKI+       E A  EIE +QQ    L++ D     
Sbjct: 11  KIGKGSFGEVFKGIDNRTQKVVAIKIID-----LEEAEDEIEDIQQEITVLSQCDSPYVT 65

Query: 103 ---GNRCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPID--LVREIARQLLE 156
              G+     + W        I+ E LG  S  D L        P+D   +  I R++L+
Sbjct: 66  KYYGSYLKDTKLW--------IIMEYLGGGSALDLLEPG-----PLDETQIATILREILK 112

Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + ++H    IH D+K  NVLL     +K+ D+  +                        
Sbjct: 113 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------ 148

Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
           G  T  +  +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 149 GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 65.8 bits (160), Expect = 4e-12
 Identities = 75/340 (22%), Positives = 134/340 (39%), Gaps = 87/340 (25%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +G+G FG+V  C  R   +M A K +  + IKK +  +M   E ++L+++          
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-----NSRFV 62

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V +   ++ ++ +C+V   + G  L   +       F        A ++   +  +H   
Sbjct: 63  VSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER 122

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ DLKPEN+LL    +I++ D   ++H P+  +   R                     
Sbjct: 123 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--------------------- 161

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
               V T  Y APEV+    +T+  D W++GC+L E+  G++ FQ  +            
Sbjct: 162 ----VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK------------ 205

Query: 286 GPLPQHMLKRVDR-HAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
                   K++ R   E+ V+       E  + + S       P  ++L           
Sbjct: 206 --------KKIKREEVERLVKEV----QEEYSEKFS-------PDARSLCKM-------- 238

Query: 345 LTHLLQGLLRYDPTDRL-----TAREALRHPFFTRDHLRR 379
                  LL  DP +RL      ARE   HP F + + +R
Sbjct: 239 -------LLCKDPKERLGCQGGGAREVKEHPLFKQINFKR 271

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 66.5 bits (162), Expect = 5e-12
 Identities = 75/280 (26%), Positives = 109/280 (38%), Gaps = 84/280 (30%)

Query: 120 CIVFEKLGSSLYDFLRKNNYRSFPIDL--VREIARQLLECIAFMHDLCMIHTDLKPENVL 177
           C+V  K  S LY +L     R  P+ L  V  +ARQLL  I ++H   +IH D+K ENVL
Sbjct: 236 CLVLPKYRSDLYTYLGA---RLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVL 292

Query: 178 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER-----PDQNYIVST 232
                          ++ P+D            I + DFG+  + R     P    I  T
Sbjct: 293 ---------------VNGPED------------ICLGDFGAACFARGSWSTPFHYGIAGT 325

Query: 233 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA-LFQTHENLEHLAMMERVLGPLPQH 291
               APEV+ G  +T   DIWS G ++ E     A LF      E      ++L      
Sbjct: 326 VDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQIL------ 379

Query: 292 MLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG-------- 343
              R+ R A+ +V     ++P+ A SR              L+ Q+   +A         
Sbjct: 380 ---RIIRQAQVHVD----EFPQHAGSR--------------LVSQYRHRAARNRRPAYTR 418

Query: 344 -----------DLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                      D+ +L+   L +D   R +A E LR P F
Sbjct: 419 PAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLF 458

Length = 461

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 64.7 bits (158), Expect = 8e-12
 Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 38/226 (16%)

Query: 49  SKMGEGTFGQV-LECWDRER---KEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKG 102
            ++GEG FG+V L  +D       E VA+K +   G +++R     EIE+L+ L  H+  
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL-DHEN- 67

Query: 103 GNRCVQIRNWFD--YRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
               V+ +   +      + ++ E L S SL D+L+++  +     L+   + Q+ + + 
Sbjct: 68  ---IVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLL-FSSQICKGMD 123

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGS 218
           ++     IH DL   N+L+ S + +K+ D+  +   P+D  Y+  + P  S I       
Sbjct: 124 YLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIF------ 177

Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                           + APE +    ++   D+WS G  L EL T
Sbjct: 178 ----------------WYAPECLRTSKFSSASDVWSFGVTLYELFT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 64.4 bits (157), Expect = 9e-12
 Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 40/226 (17%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDK 101
           KI  K+G+G F  V +        +VA+K V+       K R+  + EI++L+QL  H  
Sbjct: 5   KIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHPN 63

Query: 102 GGNRCVQIRNWFDYRNHICIVFE-----KLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
                ++    F   N + IV E      L   +  F  K   R  P   + +   QL  
Sbjct: 64  ----VIKYLASFIENNELNIVLELADAGDLSRMIKHF--KKQKRLIPERTIWKYFVQLCS 117

Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            +  MH   ++H D+KP NV + ++  +K+ D               R           F
Sbjct: 118 ALEHMHSKRIMHRDIKPANVFITATGVVKLGDLG-----------LGRF----------F 156

Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
            S T      + +V T +Y +PE I   G+ +  DIWS+GC+L E+
Sbjct: 157 SSKTTA---AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 65.0 bits (159), Expect = 1e-11
 Identities = 63/272 (23%), Positives = 103/272 (37%), Gaps = 61/272 (22%)

Query: 113 FDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDL 171
           F    ++C+V +   G  L+  L++   +    ++ R  A ++L  + ++H L +++ DL
Sbjct: 70  FQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDL 129

Query: 172 KPENVLLVSSEYIKVPDYKSSLHTP-------KDSSYFKRMPKSSAIKVIDFGSTTYERP 224
           KPEN+LL  S +I + D+  S  +        K      R    ++I    F      R 
Sbjct: 130 KPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFR- 188

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
             N  V T  Y APEVI G G     D W++G +L E+  G   F+              
Sbjct: 189 -SNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFK-------------- 233

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
                                        G+   E+  +++K              S+  
Sbjct: 234 -----------------------------GSNRDETFSNILKKEV---TFPGSPPVSS-S 260

Query: 345 LTHLLQGLLRYDPTDRL----TAREALRHPFF 372
              L++ LL  DP+ RL     A E  +HPFF
Sbjct: 261 ARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFF 292

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 65.2 bits (159), Expect = 1e-11
 Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 19/147 (12%)

Query: 142 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD------------- 188
           F  DL R    +L   I  +H +  IH D+KP+N+L+    +IK+ D             
Sbjct: 98  FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157

Query: 189 --YKSSLHTPKDS-SYFKRM--PKSSAIKVID-FGSTTYERPDQNYIVSTRHYRAPEVIL 242
             Y+   H  +DS    +         +K ++      ++R   + +V T +Y APEV+L
Sbjct: 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLL 217

Query: 243 GLGWTYPCDIWSVGCILVELCTGEALF 269
             G+T  CD WSVG IL E+  G+  F
Sbjct: 218 RTGYTQLCDWWSVGVILYEMLVGQPPF 244

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 64.4 bits (157), Expect = 1e-11
 Identities = 74/327 (22%), Positives = 130/327 (39%), Gaps = 84/327 (25%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+GEG+ G V    D+     VA+K +   K+ R   +    V+ +  +H       V++
Sbjct: 26  KIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPN----IVEM 81

Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            + +   + + +V E L G +L D +          + +  +   +L+ ++F+H   +IH
Sbjct: 82  YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIATVCLAVLKALSFLHAQGVIH 138

Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---STTYERPD 225
            D+K +++LL S                              +K+ DFG     + E P 
Sbjct: 139 RDIKSDSILLTSD---------------------------GRVKLSDFGFCAQVSKEVPR 171

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           +  +V T ++ APEVI  L +    DIWS+G +++E+  GE     + N   L  M+R+ 
Sbjct: 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEP---PYFNEPPLQAMKRIR 228

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
             LP  +     ++  K                         PRL++ + +         
Sbjct: 229 DNLPPKL-----KNLHKVS-----------------------PRLRSFLDR--------- 251

Query: 346 THLLQGLLRYDPTDRLTAREALRHPFF 372
                 +L  DP  R TA E L HPF 
Sbjct: 252 ------MLVRDPAQRATAAELLNHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 64.7 bits (157), Expect = 1e-11
 Identities = 76/335 (22%), Positives = 125/335 (37%), Gaps = 94/335 (28%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----C 106
           +G+GTFG+V+   ++   +  A+KI++     +E  + + EV   L +     N      
Sbjct: 3   LGKGTFGKVILVREKASGKYYAMKILK-----KEVIIAKDEVAHTLTESRVLKNTRHPFL 57

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++  F  ++ +C V E + G  L+  L +   R F  D  R    +++  + ++H   
Sbjct: 58  TSLKYSFQTKDRLCFVMEYVNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGK 115

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ DLK EN++L    +IK+ D+        D++  K                      
Sbjct: 116 IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTF-------------------- 155

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 283
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 156 ----CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED 211

Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
           +                                         K PR            + 
Sbjct: 212 I-----------------------------------------KFPRTL----------SA 220

Query: 344 DLTHLLQGLLRYDPTDRL-----TAREALRHPFFT 373
           D   LL GLL  DP  RL      A+E +RH FFT
Sbjct: 221 DAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFT 255

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 63.7 bits (155), Expect = 1e-11
 Identities = 61/248 (24%), Positives = 106/248 (42%), Gaps = 38/248 (15%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           +G G FG V  C  +  +++V IK +   +  K  R AA  E +VL+ L+  +      +
Sbjct: 8   VGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPN-----II 62

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +    F     + IV E   G +L ++++K        D +     Q+L  +  +H   +
Sbjct: 63  EYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLI 122

Query: 167 IHTDLKPENVLLVSSEYI-KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +H DLK +N+LL   + + K+ D+  S                   K++   S  Y    
Sbjct: 123 LHRDLKTQNILLDKHKMVVKIGDFGIS-------------------KILSSKSKAYT--- 160

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM--MER 283
              +V T  Y +PE+  G  +    DIW++GC+L EL + +  F+   NL  L +  M  
Sbjct: 161 ---VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEA-ANLPALVLKIMSG 216

Query: 284 VLGPLPQH 291
              P+   
Sbjct: 217 TFAPISDR 224

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 64.5 bits (157), Expect = 2e-11
 Identities = 76/339 (22%), Positives = 124/339 (36%), Gaps = 107/339 (31%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V     +   E  AIK ++  +    K  +    E  +L +L+         
Sbjct: 26  LGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSH-----PFI 80

Query: 107 VQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V +   F   N +  + E  +G  L+  LRK     FP D+ +    +L+    ++H   
Sbjct: 81  VNMMCSFQDENRVYFLLEFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSKD 138

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+LL +  ++KV D+           + K++                  PD
Sbjct: 139 IIYRDLKPENLLLDNKGHVKVTDF----------GFAKKV------------------PD 170

Query: 226 QNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG------EALFQTHENLEHL 278
           + + +  T  Y APEVI   G     D W++G +L E   G      +  F+ +E     
Sbjct: 171 RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEK---- 226

Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
                                    +  GRL +P                          
Sbjct: 227 -------------------------ILAGRLKFP-----------------------NWF 238

Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTA-----REALRHPFF 372
           D  A D   L++GLL+ D T RL        +   HP+F
Sbjct: 239 DGRARD---LVKGLLQTDHTKRLGTLKGGVADVKNHPYF 274

Length = 329

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 63.5 bits (154), Expect = 2e-11
 Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 35/249 (14%)

Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   K  VAIK ++      EA + E +++++L +HDK   
Sbjct: 9   RLDVKLGQGCFGEVWMGTWNGTTK--VAIKTLKPGTMMPEAFLQEAQIMKKL-RHDKLVP 65

Query: 105 RCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
               +         I IV E +G  SL DFL++ + +   +  + ++A Q+ + +A++  
Sbjct: 66  LYAVVS-----EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER 120

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  IH DL+  N+L+  +   K+ D+  +    +D+ Y  R      IK           
Sbjct: 121 MNYIHRDLRAANILVGDNLVCKIADFGLA-RLIEDNEYTARQGAKFPIK----------- 168

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 169 -----------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVE 217

Query: 283 R-VLGPLPQ 290
           R    P PQ
Sbjct: 218 RGYRMPCPQ 226

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 63.9 bits (155), Expect = 2e-11
 Identities = 73/326 (22%), Positives = 130/326 (39%), Gaps = 78/326 (23%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+GEG+ G V     +   ++VA+K +   K+ R   +    V+ +  +H+      V++
Sbjct: 27  KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN----VVEM 82

Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 83  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLKALSVLHAQGVIH 139

Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+K +++LL     +K+ D+       K                        E P +  
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSK------------------------EVPRRKS 175

Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 288
           +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ + M+       
Sbjct: 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 228

Query: 289 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 348
                              R + P               P+L+NL    V  S   L   
Sbjct: 229 -------------------RDNLP---------------PKLKNL--HKVSPS---LKGF 249

Query: 349 LQGLLRYDPTDRLTAREALRHPFFTR 374
           L  LL  DP  R TA E L+HPF  +
Sbjct: 250 LDRLLVRDPAQRATAAELLKHPFLAK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 65.1 bits (158), Expect = 2e-11
 Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 36/249 (14%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAM-IEIEVLQQLAKHDKGGNRC 106
           K+G G FG+V     +  +E    K +  RG+K+  ++ + IE+ V+++L KH       
Sbjct: 20  KIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMREL-KHKNIVRYI 78

Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPI------DLVREIARQLLECIAF 160
            +  N  + + +I + F   G      L +N  + + +        + +I RQLL  +A+
Sbjct: 79  DRFLNKANQKLYILMEFCDAGD-----LSRNIQKCYKMFGKIEEHAIVDITRQLLHALAY 133

Query: 161 MHDLC-------MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 213
            H+L        ++H DLKP+N+ L  S  I+        H  K ++    +      K+
Sbjct: 134 CHNLKDGPNGERVLHRDLKPQNIFL--STGIR--------HIGKITAQANNLNGRPIAKI 183

Query: 214 IDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALF 269
            DFG +     +   +  V T +Y +PE++L    +Y    D+W++GCI+ ELC+G+  F
Sbjct: 184 GDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPF 243

Query: 270 QTHENLEHL 278
               N   L
Sbjct: 244 HKANNFSQL 252

Length = 1021

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 63.1 bits (153), Expect = 3e-11
 Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 34/237 (14%)

Query: 50  KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           K+G G FG+V +  W+   K  VA+K ++      E+ + E +++++L +HDK     VQ
Sbjct: 13  KLGNGQFGEVWMGTWNGNTK--VAVKTLKPGTMSPESFLEEAQIMKKL-RHDK----LVQ 65

Query: 109 IRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +         I IV E +   SL DFL+    R+  +  + ++A Q+   +A++  +  I
Sbjct: 66  LYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI 124

Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DL+  N+L+      K+ D+  +    +D+ Y  R      IK               
Sbjct: 125 HRDLRSANILVGDGLVCKIADFGLA-RLIEDNEYTARQGAKFPIK--------------- 168

Query: 228 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 283
                  + APE  L   +T   D+WS G +L EL T G   +    N E L  +ER
Sbjct: 169 -------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER 218

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 63.7 bits (155), Expect = 3e-11
 Identities = 79/335 (23%), Positives = 131/335 (39%), Gaps = 96/335 (28%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAA--MIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+VL    +   +  A+K++  + I K +E    M E  VL +  KH       
Sbjct: 3   IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHP----FL 58

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V +   F   + +  V + + G  L+  L++   RSFP    R  A ++   + ++H L 
Sbjct: 59  VGLHYSFQTADKLYFVLDYVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLN 116

Query: 166 MIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
           +I+ DLKPEN+LL S  ++ + D+   K  +   K +S F   P+               
Sbjct: 117 IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPE--------------- 161

Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
                       Y APEV+    +    D W +G +L E+  G   F + +  E   M +
Sbjct: 162 ------------YLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE---MYD 206

Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH-VDHS 341
            +L                                             + L ++  +  S
Sbjct: 207 NILN--------------------------------------------KPLRLKPNISVS 222

Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALR----HPFF 372
           A    HLL+GLL+ D T RL A++       H FF
Sbjct: 223 A---RHLLEGLLQKDRTKRLGAKDDFLEIKNHVFF 254

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 63.6 bits (155), Expect = 3e-11
 Identities = 74/338 (21%), Positives = 126/338 (37%), Gaps = 101/338 (29%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-------EAAMIEIEVLQQLAKHDKGG 103
           +G+G+FG+VL    +   E+ A+K++   KK         E  M E  VL    KH    
Sbjct: 3   LGKGSFGKVLLAELKGTDELYAVKVL---KKDVILQDDDVECTMTEKRVLALAGKHP--- 56

Query: 104 NRCVQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
               Q+ + F  ++ +  V E +  G  ++   R      F     R  A +++  + F+
Sbjct: 57  -FLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFL 112

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H+  +I+ DLK +NVLL S  +IK+ D+               M K      I  G TT 
Sbjct: 113 HERGIIYRDLKLDNVLLDSEGHIKIADFG--------------MCKEG----ILGGVTT- 153

Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLA 279
                +    T  Y APE++    +    D W++G +L E+  G++ F     + L    
Sbjct: 154 -----STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSI 208

Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
           + + V    P+ +                        S+E+                   
Sbjct: 209 LEDEVR--YPRWL------------------------SKEAKS----------------- 225

Query: 340 HSAGDLTHLLQGLLRYDPTDRL----TAREALR-HPFF 372
                   +L+  L  +P  RL    T  + ++ HPFF
Sbjct: 226 --------ILKSFLTKNPEKRLGCLPTGEQDIKGHPFF 255

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 63.4 bits (154), Expect = 3e-11
 Identities = 84/347 (24%), Positives = 134/347 (38%), Gaps = 108/347 (31%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+V++   R+ + + A+K +R      +      + E  VL Q+         C
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV--------NC 52

Query: 107 ---VQIRNWFDYRNHICIVFEKL-GSSLYDFLRK----NNYRSFPIDLVREIARQLLECI 158
              V ++  F     + +V   + G  L+  L++    +  R+      R    +LL  +
Sbjct: 53  PFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRA------RFYTAELLCAL 106

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
             +H   +I+ DLKPEN+LL         DY+                    I + DFG 
Sbjct: 107 ENLHKFNVIYRDLKPENILL---------DYQGH------------------IALCDFGL 139

Query: 219 TTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
                 D    N    T  Y APE++LG G+T   D W++G +L E+ TG          
Sbjct: 140 CKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTG---------- 189

Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 335
                       LP    + V+    K ++   L +P+G                     
Sbjct: 190 ------------LPPFYDENVNEMYRKILQE-PLRFPDG--------------------- 215

Query: 336 QHVDHSAGDLTHLLQGLLRYDPTDRL---TAREALRHPFFTRDHLRR 379
              D  A D   LL GLL  DPT RL    A+E   HPFF++   ++
Sbjct: 216 --FDRDAKD---LLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSWKK 257

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 62.7 bits (152), Expect = 4e-11
 Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 58/236 (24%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G GT+GQV +    +  ++ AIK++   +   E   +EI +L++ + H          R
Sbjct: 24  VGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHH----------R 73

Query: 111 NWFDY------------RNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLEC 157
           N   Y             + + +V E  G+ S+ D ++     +   D +  I R++L  
Sbjct: 74  NIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRG 133

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           +A +H   +IH D+K +NVLL                            +++ +K++DFG
Sbjct: 134 LAHLHAHKVIHRDIKGQNVLLT---------------------------ENAEVKLVDFG 166

Query: 218 -STTYERP--DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTG 265
            S   +R    +N  + T ++ APEVI         + Y  DIWS+G   +E+  G
Sbjct: 167 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEG 222

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 62.6 bits (153), Expect = 4e-11
 Identities = 54/235 (22%), Positives = 92/235 (39%), Gaps = 54/235 (22%)

Query: 50  KMGEGTFGQVLEC-WDR--ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGN 104
           K+GEG FG+V +        +   VA+K ++    ++ R+  + E  V+++L  H     
Sbjct: 2   KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL-GHPN--- 57

Query: 105 RCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKN-NYRSFPI-------DLVREIARQL 154
             V++         + +V E  + G  L D+LRK+      P        DL+   A Q+
Sbjct: 58  -VVRLLGVCTEEEPLYLVLEYMEGGD-LLDYLRKSRPVFPSPEKSTLSLKDLLS-FAIQI 114

Query: 155 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
            + + ++     +H DL   N L V  + +                          +K+ 
Sbjct: 115 AKGMEYLASKKFVHRDLAARNCL-VGEDLV--------------------------VKIS 147

Query: 215 DFGSTTYERPDQNYIVSTR---HYR--APEVILGLGWTYPCDIWSVGCILVELCT 264
           DFG +     D  Y   T      R  APE +    +T   D+WS G +L E+ T
Sbjct: 148 DFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFT 202

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 62.3 bits (151), Expect = 6e-11
 Identities = 78/339 (23%), Positives = 131/339 (38%), Gaps = 85/339 (25%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +G+G FG+V  C  R   +M A K +  + IKK +  +M   E ++L+++          
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-----NSQFV 62

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V +   ++ ++ +C+V   + G  L   +       F  +     A ++L  +  +H   
Sbjct: 63  VNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN 122

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
            ++ DLKPEN+LL    +I++ D   ++  P+  S   R                     
Sbjct: 123 TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR--------------------- 161

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
               V T  Y APEV+    +T   D W +GC++ E+  G++ F+           E+V 
Sbjct: 162 ----VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFR--------GRKEKV- 208

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
               + + +RV    E Y           A   E  KS+ K+                  
Sbjct: 209 --KREEVDRRVLETEEVY----------SAKFSEEAKSICKM------------------ 238

Query: 346 THLLQGLLRYDPTDRL-----TAREALRHPFFTRDHLRR 379
                 LL  DP  RL      A E  RHPFF   + +R
Sbjct: 239 ------LLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKR 271

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 62.0 bits (150), Expect = 7e-11
 Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 46/242 (19%)

Query: 48  HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKGGNRC 106
           + K+G+G  G V    D    + VAIK +   K+ ++  +I EI V+++L   +      
Sbjct: 24  YEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPN------ 77

Query: 107 VQIRNWFDYR---NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             I N+ D     + + +V E L G SL D + +       I  V    R+ L+ + F+H
Sbjct: 78  --IVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAV---CRECLQALEFLH 132

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---ST 219
              +IH D+K +NVLL                               ++K+ DFG     
Sbjct: 133 ANQVIHRDIKSDNVLL---------------------------GMDGSVKLTDFGFCAQI 165

Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           T E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L  L 
Sbjct: 166 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY 225

Query: 280 MM 281
           ++
Sbjct: 226 LI 227

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 61.7 bits (150), Expect = 8e-11
 Identities = 68/329 (20%), Positives = 128/329 (38%), Gaps = 88/329 (26%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHDKGGNRCVQ 108
           +G G +G V          +VA+KI+       + + I  E+ +L QL +  +  N    
Sbjct: 9   IGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQL-RQSQPPN---I 64

Query: 109 IRNWFDYRN--HICIVFEKL-GSSLYDFLRKNNYRSFPID--LVREIARQLLECIAFMHD 163
            + +  Y     + I+ E   G S+   ++       PI    +  I R++L  + ++H 
Sbjct: 65  TKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAG-----PIAEKYISVIIREVLVALKYIHK 119

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           + +IH D+K  N+L+ ++  +K+ D+  +    ++SS  KR              +T+  
Sbjct: 120 VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS--KR--------------STF-- 161

Query: 224 PDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
                 V T ++ APEVI  G  +    DIWS+G  + E+ TG   +   +         
Sbjct: 162 ------VGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF------- 208

Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
           R +  +P+                                   K PRL++      +  +
Sbjct: 209 RAMMLIPKS----------------------------------KPPRLED------NGYS 228

Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPF 371
             L   +   L  +P +RL+A E L+  +
Sbjct: 229 KLLREFVAACLDEEPKERLSAEELLKSKW 257

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 61.4 bits (149), Expect = 1e-10
 Identities = 60/228 (26%), Positives = 94/228 (41%), Gaps = 57/228 (25%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           ++G G+FG V    D    E+VAIK      K   +     E  Q + K  +   +    
Sbjct: 22  EIGHGSFGAVYFARDVRTNEVVAIK------KMSYSGKQSNEKWQDIIKEVRFLQQLRH- 74

Query: 110 RNWFDY-----RNHIC-IVFEK-LGSS--LYDFLRKNNYRSFPIDLVREIA---RQLLEC 157
            N  +Y     R H   +V E  LGS+  + +  +K      P+  V EIA      L+ 
Sbjct: 75  PNTIEYKGCYLREHTAWLVMEYCLGSASDILEVHKK------PLQEV-EIAAICHGALQG 127

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           +A++H    IH D+K  N+LL                            +   +K+ DFG
Sbjct: 128 LAYLHSHERIHRDIKAGNILLT---------------------------EPGTVKLADFG 160

Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVEL 262
           S +   P  ++ V T ++ APEVIL +    +    D+WS+G   +EL
Sbjct: 161 SASLVSPANSF-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 60.7 bits (147), Expect = 2e-10
 Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 43/220 (19%)

Query: 50  KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           ++G G FG V L  W  +RK  VAIK +R      E  + E +V+ +L+       + VQ
Sbjct: 11  EIGSGQFGLVWLGYWLEKRK--VAIKTIREGAMSEEDFIEEAQVMMKLSH-----PKLVQ 63

Query: 109 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +      R+ IC+VFE +    L D+LR      F  + +  +   + E +A++    +I
Sbjct: 64  LYGVCTERSPICLVFEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVI 122

Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DL   N L+                            ++  +KV DFG T +   DQ 
Sbjct: 123 HRDLAARNCLV---------------------------GENQVVKVSDFGMTRFVLDDQ- 154

Query: 228 YIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVEL 262
           Y  ST       + +PEV     ++   D+WS G ++ E+
Sbjct: 155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 61.6 bits (149), Expect = 2e-10
 Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 23/151 (15%)

Query: 142 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK--SSLHTPKDS 199
           FP  L R    +L   I  +H +  IH D+KP+N+L+    +IK+ D+   +      +S
Sbjct: 98  FPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157

Query: 200 SYFKR--------MPKS------SAIKVIDFGSTTYERPDQNY-------IVSTRHYRAP 238
            Y+++        M  S      S  +  D   T  +R  + +       +V T +Y AP
Sbjct: 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAP 217

Query: 239 EVILGLGWTYPCDIWSVGCILVELCTGEALF 269
           EV+L  G+T  CD WSVG IL E+  G+  F
Sbjct: 218 EVLLRKGYTQLCDWWSVGVILFEMLVGQPPF 248

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 61.0 bits (148), Expect = 2e-10
 Identities = 79/341 (23%), Positives = 135/341 (39%), Gaps = 53/341 (15%)

Query: 39  VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK 98
           V ++    +   +  G+ G+V       + + V +KI  G K      +IE  +LQ +  
Sbjct: 62  VVASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKI--GQKG---TTLIEAMLLQNV-N 115

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           H       +++++        C+V     S LY +L K + R  PID    I +Q+LE +
Sbjct: 116 HPS----VIRMKDTLVSGAITCMVLPHYSSDLYTYLTKRS-RPLPIDQALIIEKQILEGL 170

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            ++H   +IH D+K EN+ +   + + + D  ++           + P      V+    
Sbjct: 171 RYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAA-----------QFP------VVA--- 210

Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
                P    +  T    APEV+    +    DIWS G +L E+    A   T       
Sbjct: 211 -----PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEML---AYPSTIFEDPPS 262

Query: 279 AMMERVLGPLPQHMLKRVDR---HAEKYVRRGRLDWPEGAASRESIK--SVMKLPRLQNL 333
              E V      H+LK +     H E++ R      P     R  I+  S+ + P  +  
Sbjct: 263 TPEEYVKSC-HSHLLKIISTLKVHPEEFPRD-----PGSRLVRGFIEYASLERQPYTRYP 316

Query: 334 IMQHVD-HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             Q V+    G+   L+  +L +D   R +A E L +P F 
Sbjct: 317 CFQRVNLPIDGEF--LVHKMLTFDAAMRPSAEEILNYPMFA 355

Length = 357

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 60.0 bits (145), Expect = 3e-10
 Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 56/252 (22%)

Query: 38  IVFSAFAD-----KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV 92
           I+F +F D     +I   +G+GT+G+V +  +++     A+KI+  I    E    E  +
Sbjct: 8   IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNI 67

Query: 93  LQQLAKHDKGGNRCVQIRNWF---DYRN--HICIVFEKL-GSSLYD----FLRKNNYRSF 142
           L+ L+ H       V+    +   D +N   + +V E   G S+ D    FL++      
Sbjct: 68  LKALSDHPN----VVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEE 123

Query: 143 PIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF 202
           PI  +  I  + L  +  +H    IH D+K  N+LL +                      
Sbjct: 124 PI--IAYILHEALMGLQHLHVNKTIHRDVKGNNILLTT---------------------- 159

Query: 203 KRMPKSSAIKVIDFGST---TYERPDQNYIVSTRHYRAPEVI-----LGLGWTYPCDIWS 254
                   +K++DFG +   T  R  +N  V T  + APEVI     L   +   CD+WS
Sbjct: 160 -----EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWS 214

Query: 255 VGCILVELCTGE 266
           +G   +EL  G+
Sbjct: 215 LGITAIELGDGD 226

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 59.7 bits (145), Expect = 4e-10
 Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 46/225 (20%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA-----KHDKGG 103
           S++GEG  G V +C  +    + A+K +           ++ ++L++L      K     
Sbjct: 7   SRLGEGAGGSVTKCRLKNTGMIFALKTI----TTDPNPDLQKQILRELEINKSCKSP--- 59

Query: 104 NRCVQIRNWF--DYRNHICIVFEKLGS----SLYDFLRKNNYRSFPIDLVREIARQLLEC 157
              V+    F  +  + I I  E        S+Y  ++K   R     L + IA  +L+ 
Sbjct: 60  -YIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGK-IAESVLKG 117

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           ++++H   +IH D+KP N+LL     +K+ D+  S                   ++++  
Sbjct: 118 LSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSG------------------ELVNSL 159

Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
           + T+          T  Y APE I G  ++   D+WS+G  L+E+
Sbjct: 160 AGTF--------TGTSFYMAPERIQGKPYSITSDVWSLGLTLLEV 196

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 59.8 bits (145), Expect = 4e-10
 Identities = 68/257 (26%), Positives = 105/257 (40%), Gaps = 54/257 (21%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G+G+FG+V               +VR I       +  ++VL++     +   R    R
Sbjct: 4   LGQGSFGKVF--------------LVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMER 49

Query: 111 NWFDYRNHICIV-----FEKLGSSLY---DFLRKNNYRS-------FPIDLVREIARQLL 155
           +     NH  IV     F+  G  LY   DFLR  +  +       F  + V+    +L 
Sbjct: 50  DILAEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELA 108

Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             +  +H L +I+ DLKPEN+LL    +IK+ D+  S    K+S              ID
Sbjct: 109 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES--------------ID 150

Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
                Y          T  Y APEV+   G T   D WS G ++ E+ TG   FQ  +  
Sbjct: 151 HEKKAYS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK 204

Query: 276 EHLAMMERVLGPLPQHM 292
           E + M+ +    +PQ +
Sbjct: 205 ETMTMILKAKLGMPQFL 221

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 59.7 bits (144), Expect = 6e-10
 Identities = 63/261 (24%), Positives = 108/261 (41%), Gaps = 54/261 (20%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ-- 108
           +G+GTFG+V+   ++      A+KI++     +E  + + EV   L +     NR +Q  
Sbjct: 3   LGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTE-----NRVLQNS 52

Query: 109 -------IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                  ++  F   + +C V E   G  L+  L +   R F  D  R    +++  + +
Sbjct: 53  RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDY 110

Query: 161 MH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           +H +  +++ DLK EN++L    +IK+ D+       KD +  K                
Sbjct: 111 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF-------------- 156

Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEH 277
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 157 ----------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 206

Query: 278 LAMME-----RVLGPLPQHML 293
           L +ME     R L P  + +L
Sbjct: 207 LILMEEIRFPRTLSPEAKSLL 227

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 59.0 bits (142), Expect = 7e-10
 Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 46/240 (19%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKGGNRCVQ 108
           K+G+G  G V    D    + VAIK +   ++ ++  +I EI V+++        N+   
Sbjct: 26  KIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRE--------NKNPN 77

Query: 109 IRNWFDYR---NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
           I N+ D     + + +V E L G SL D + +       I  V    R+ L+ + F+H  
Sbjct: 78  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALDFLHSN 134

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---STTY 221
            +IH D+K +N+LL                               ++K+ DFG     T 
Sbjct: 135 QVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCAQITP 167

Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
           E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L  L ++
Sbjct: 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 227

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 59.2 bits (143), Expect = 7e-10
 Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 41/228 (17%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+VL    + + E  A+K ++     I    E  M+E  VL    ++       
Sbjct: 3   LGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENP----FL 58

Query: 107 VQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREI--ARQLLECIAFMH 162
             +   F  + H+  V E L  G  ++    K  +     DL R    A +++  + F+H
Sbjct: 59  THLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRF-----DLYRATFYAAEIVCGLQFLH 113

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +I+ DLK +NV+L    +IK+ D+               M K +     D  ++T+ 
Sbjct: 114 SKGIIYRDLKLDNVMLDRDGHIKIADFG--------------MCKENVFG--DNRASTF- 156

Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 270
                    T  Y APE++ GL +T+  D WS G +L E+  G++ F 
Sbjct: 157 -------CGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFH 197

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 59.0 bits (143), Expect = 8e-10
 Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 35/227 (15%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGG 103
           +  S +G G  G V +        ++A K+V        R+  + E++++     H+   
Sbjct: 8   ETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIM-----HECRS 62

Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
              V     F   N+IC+  E +     D + K      P++++ +IA  ++E + ++++
Sbjct: 63  PYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKK-GGPIPVEILGKIAVAVVEGLTYLYN 121

Query: 164 -LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              ++H D+KP N+L+ S   IK+ D+  S                   ++I+  + T+ 
Sbjct: 122 VHRIMHRDIKPSNILVNSRGQIKLCDFGVSG------------------ELINSIADTF- 162

Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                  V T  Y +PE I G  +T   D+WS+G  ++EL  G+  F
Sbjct: 163 -------VGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPF 202

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 58.8 bits (142), Expect = 8e-10
 Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 35/228 (15%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREA-AMIEIEVLQQLAKHDKGGNRC 106
           +G+G FG+V     +   +M A K +   R  KK  E  A++E E+L+++          
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSP-----FI 55

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V +   F+ + H+C+V   + G  L   +     R   ++ V   + Q+   I  +H + 
Sbjct: 56  VNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD 115

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ D+KPENVLL      ++ D   ++                       G T  +R  
Sbjct: 116 IVYRDMKPENVLLDDQGNCRLSDLGLAVELKD-------------------GKTITQR-- 154

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
                 T  Y APE++    ++YP D +++GC + E+  G   F+ H+
Sbjct: 155 ----AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHK 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 58.8 bits (142), Expect = 9e-10
 Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 50/234 (21%)

Query: 46  KIHSKMGEGTFGQV-LECWDRERK---EMVAIKIVRG--IKKYREAAMIEIEVLQQLAKH 99
           K    +GEG FG+V L C+D       EMVA+K ++    ++       EI +L+ L   
Sbjct: 7   KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHE 66

Query: 100 D---------KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 150
           +         + G + +Q+           + +  LGS L D+L K+      + L    
Sbjct: 67  NIVKYKGCCSEQGGKGLQL----------IMEYVPLGS-LRDYLPKHKLNLAQLLL---F 112

Query: 151 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 210
           A+Q+ E +A++H    IH DL   NVLL +   +K+ D+  +   P+   Y+        
Sbjct: 113 AQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY-------- 164

Query: 211 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
            +V + G             S   + A E +    ++Y  D+WS G  L EL T
Sbjct: 165 -RVREDGD------------SPVFWYAVECLKENKFSYASDVWSFGVTLYELLT 205

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 59.3 bits (143), Expect = 9e-10
 Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 49/248 (19%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQL-AKHD----KGGNR 105
           +G G FG+V     ++   + A+KI+R      +A M+E E +  + A+ D      G  
Sbjct: 9   IGRGAFGEVRLVQKKDTGHIYAMKILR------KADMLEKEQVAHIRAERDILVEADGAW 62

Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL-----LECIA 159
            V++   F  + ++ ++ E L G  +   L K        D + E A Q      +  I 
Sbjct: 63  VVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKK-------DTLSEEATQFYIAETVLAID 115

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPD---------------YKSSLHTPKDSSYFKR 204
            +H L  IH D+KP+N+LL +  ++K+ D               Y++  H P     F+ 
Sbjct: 116 AIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQN 175

Query: 205 MPKSSAIKVIDFGSTTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 261
           M            + T+++  +      V T  Y APEV +  G+   CD WS+G I+ E
Sbjct: 176 MNSKRK-------AETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYE 228

Query: 262 LCTGEALF 269
           +  G   F
Sbjct: 229 MLIGYPPF 236

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 58.7 bits (142), Expect = 9e-10
 Identities = 76/339 (22%), Positives = 131/339 (38%), Gaps = 85/339 (25%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +G+G FG+V  C  R   +M A K +  + IKK +  AM   E ++L+++          
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-----NSRFV 62

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V +   ++ ++ +C+V   + G  L   +       F  +     A ++   +  +H   
Sbjct: 63  VSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER 122

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ DLKPEN+LL    +I++ D   ++  P+                   G T   R  
Sbjct: 123 IVYRDLKPENILLDDYGHIRISDLGLAVEIPE-------------------GETIRGR-- 161

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
               V T  Y APEV+    +T+  D W +GC++ E+  G++ F+  +       +ER  
Sbjct: 162 ----VGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVER-- 215

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                    RV    E+Y  +    + E A S                            
Sbjct: 216 ---------RVKEDQEEYSEK----FSEAARS---------------------------- 234

Query: 346 THLLQGLLRYDPTDRL-----TAREALRHPFFTRDHLRR 379
             + + LL  DP  RL      A E   HPFF   + +R
Sbjct: 235 --ICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKR 271

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 58.5 bits (141), Expect = 1e-09
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)

Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 9   RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 62

Query: 105 RCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 63  -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 120

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 121 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 168

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 169 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 217

Query: 283 R 283
           R
Sbjct: 218 R 218

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 58.6 bits (141), Expect = 1e-09
 Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 46/240 (19%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKGGNRCVQ 108
           K+G+G  G V    D    + VAI+ +   ++ ++  +I EI V+++        N+   
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE--------NKNPN 78

Query: 109 IRNWFDYR---NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
           I N+ D     + + +V E L G SL D + +       I  V    R+ L+ + F+H  
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSN 135

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---STTY 221
            +IH D+K +N+LL                               ++K+ DFG     T 
Sbjct: 136 QVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCAQITP 168

Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
           E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L  L ++
Sbjct: 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 58.7 bits (142), Expect = 1e-09
 Identities = 58/240 (24%), Positives = 101/240 (42%), Gaps = 52/240 (21%)

Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           + S +G G FG+V    ++   ++ A+K+   +KK   + ++  E +    +        
Sbjct: 5   VKSLVGRGHFGEVQVVREKATGDIYAMKV---MKK---SVLLAQETVSFFEEE----RDI 54

Query: 107 VQIRN--W-------FDYRNHICIVFEKL-GSSLYDFLRKNNYRS-FPIDLVREIARQLL 155
           + I N  W       F  ++++ +V E   G  L   L  N Y   F  D+ +    +L+
Sbjct: 55  LSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLL--NRYEDQFDEDMAQFYLAELV 112

Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             I  +H +  +H D+KPENVL+  + +IK+ D+ S+     +     ++P         
Sbjct: 113 LAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLP--------- 163

Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILGL----GWTY--PCDIWSVGCILVELCTGEALF 269
                         V T  Y APEV+  +      TY   CD WS+G I  E+  G + F
Sbjct: 164 --------------VGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPF 209

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 58.8 bits (142), Expect = 1e-09
 Identities = 75/332 (22%), Positives = 129/332 (38%), Gaps = 86/332 (25%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +G+GTFGQV +   ++ + + A+K++  + I   +E A    E  +L +    +      
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDE--SPFI 58

Query: 107 VQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V ++  F   + + +V +   G  L+  L+K     F  D  +    +L+  +  +H   
Sbjct: 59  VGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKYD 116

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ DLKPEN+LL ++ +I + D+  S     D+                   TT     
Sbjct: 117 IVYRDLKPENILLDATGHIALCDFGLSKANLTDN------------------KTT----- 153

Query: 226 QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
            N    T  Y APEV+L   G+T   D WS+G ++ E+C G + F               
Sbjct: 154 -NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPF--------------- 197

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
                Q M +         +  G++ +P+   S E                         
Sbjct: 198 YAEDTQQMYRN--------IAFGKVRFPKNVLSDEG------------------------ 225

Query: 345 LTHLLQGLLRYDPTDRL----TAREALRHPFF 372
               ++GLL  +P  RL     A E   HPFF
Sbjct: 226 -RQFVKGLLNRNPQHRLGAHRDAVELKEHPFF 256

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 58.1 bits (140), Expect = 1e-09
 Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 40/283 (14%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           +G+G++G+V     R   +   IK   +    ++ R+AA  E ++L QL KH    N   
Sbjct: 8   VGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQL-KHP---NIVA 63

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
              +W      + IV     G  LY  L++   +  P + V E   Q+   + ++H+  +
Sbjct: 64  YRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHI 123

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLK +NV L  +  IKV D               R+ ++      D  ST       
Sbjct: 124 LHRDLKTQNVFLTRTNIIKVGDLG-----------IARVLENQC----DMAST------- 161

Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL- 285
             ++ T +Y +PE+     + Y  D+W++GC + E+ T +  F      +  +++ R++ 
Sbjct: 162 --LIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK---DMNSLVYRIIE 216

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 328
           G LP  M K       + +       PE    R S+KS+++ P
Sbjct: 217 GKLPP-MPKDYSPELGELIATMLSKRPE---KRPSVKSILRQP 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 57.8 bits (139), Expect = 2e-09
 Identities = 60/289 (20%), Positives = 123/289 (42%), Gaps = 43/289 (14%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI- 109
           +G GT+GQV +    +  ++ AIK++       E    EI +L++ + H           
Sbjct: 14  VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 73

Query: 110 -RNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
            +N     + + +V E  G+ S+ D ++     +   + +  I R++L  ++ +H   +I
Sbjct: 74  KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVI 133

Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERP-- 224
           H D+K +NVLL                            +++ +K++DFG S   +R   
Sbjct: 134 HRDIKGQNVLLT---------------------------ENAEVKLVDFGVSAQLDRTVG 166

Query: 225 DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
            +N  + T ++ APEVI         + +  D+WS+G   +E+  G         +  L 
Sbjct: 167 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF 226

Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 328
           ++ R   P P+   K+  +  + ++    +   +  + R + + +MK P
Sbjct: 227 LIPR--NPAPRLKSKKWSKKFQSFIESCLV---KNHSQRPTTEQLMKHP 270

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 57.7 bits (139), Expect = 2e-09
 Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 38/232 (16%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDK 101
           +I  K+G G F +V        ++ VA+K V+  +    K R+  + EI++L+QL   + 
Sbjct: 5   QIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPN- 63

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKLG----SSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
                ++  + F   N + IV E       S +  + +K   R  P   V +   QL   
Sbjct: 64  ----VIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQK-RLIPERTVWKYFVQLCSA 118

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           +  MH   ++H D+KP NV + ++  +K+ D               R           F 
Sbjct: 119 VEHMHSRRVMHRDIKPANVFITATGVVKLGDLG-----------LGRF----------FS 157

Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
           S T      + +V T +Y +PE I   G+ +  DIWS+GC+L E+   ++ F
Sbjct: 158 SKTTA---AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 57.0 bits (137), Expect = 3e-09
 Identities = 68/324 (20%), Positives = 124/324 (38%), Gaps = 78/324 (24%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+GEG+ G V    ++     VA+K++   K+ R   +    V+ +  +H       V++
Sbjct: 28  KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH----QNVVEM 83

Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
              +     + ++ E L G +L D + +       I  V E    +L+ + ++H   +IH
Sbjct: 84  YKSYLVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCE---SVLQALCYLHSQGVIH 140

Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+K +++LL     +K+ D+       KD                         P +  
Sbjct: 141 RDIKSDSILLTLDGRVKLSDFGFCAQISKDV------------------------PKRKS 176

Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 288
           +V T ++ APEVI    +    DIWS+G +++E+  GE  + +                 
Sbjct: 177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS--------------- 221

Query: 289 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 348
           P   +KR+           R   P    +   I  V++                      
Sbjct: 222 PVQAMKRL-----------RDSPPPKLKNAHKISPVLR--------------------DF 250

Query: 349 LQGLLRYDPTDRLTAREALRHPFF 372
           L+ +L  +P +R TA+E L HPF 
Sbjct: 251 LERMLTREPQERATAQELLDHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 57.3 bits (138), Expect = 4e-09
 Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 38/245 (15%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+VL    +   +  A+K+++      +K ++  M E  VL +  KH       
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHP----FL 58

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V +   F     +  V + + G  L+  L++   RSFP    R  A ++   + ++H + 
Sbjct: 59  VGLHYSFQTTEKLYFVLDFVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSIN 116

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ DLKPEN+LL S  ++ + D+                     I   D  +T      
Sbjct: 117 IVYRDLKPENILLDSQGHVVLTDFGLC---------------KEGIAQSDTTTT------ 155

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF---QTHENLEHLAMME 282
                 T  Y APEVI    +    D W +G +L E+  G   F      E  +++    
Sbjct: 156 ---FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP 212

Query: 283 RVLGP 287
            VL P
Sbjct: 213 LVLRP 217

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 57.3 bits (138), Expect = 4e-09
 Identities = 76/335 (22%), Positives = 121/335 (36%), Gaps = 94/335 (28%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMI-EIEVLQQLAKHDKGGNRC 106
           +G+GTFG+V+   ++      A+KI+R    I K   A  + E  VLQ   +H       
Sbjct: 3   LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHP----FL 57

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++  F   + +C V E   G  L+  L +   R F  +  R    +++  + ++H   
Sbjct: 58  TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 115

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ D+K EN++L    +IK+ D+        D +  K                      
Sbjct: 116 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF-------------------- 155

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 283
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 156 ----CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 211

Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
           +  P                    R   PE  +                           
Sbjct: 212 IRFP--------------------RTLSPEAKS--------------------------- 224

Query: 344 DLTHLLQGLLRYDPTDRL-----TAREALRHPFFT 373
               LL GLL+ DP  RL      A+E + H FF 
Sbjct: 225 ----LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 255

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 56.1 bits (135), Expect = 6e-09
 Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 35/236 (14%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEG+FG++     +   E   IK +   K   K +EA+  E+ +L ++ KH       
Sbjct: 7   KIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKM-KHPN----I 61

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V     F     + IV E   G  L   + +     F  D +     Q+   +  +HD  
Sbjct: 62  VTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK 121

Query: 166 MIHTDLKPENVLLVSSEYI-KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
           ++H D+K +N+ L  +  + K+ D+  +     DS                         
Sbjct: 122 ILHRDIKSQNIFLSKNGMVAKLGDFGIA-RQLNDSMELAYT------------------- 161

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                V T +Y +PE+     +    DIWS+GC+L ELCT +  F+ + NL  L +
Sbjct: 162 ----CVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN-NLHQLVL 212

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 56.5 bits (136), Expect = 6e-09
 Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 46/225 (20%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKGGNRCVQ 108
           K+G+G  G V    D    + VAIK +   ++ ++  +I EI V+++        N+   
Sbjct: 26  KIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRE--------NKHPN 77

Query: 109 IRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
           I N+ D     + + +V E L G SL D + +       I  V    R+ L+ + F+H  
Sbjct: 78  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSN 134

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +IH D+K +N+LL                               ++K+ DFG      P
Sbjct: 135 QVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCAQITP 167

Query: 225 DQN---YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
           +Q+    +V T ++ APEV+    +    DIWS+G + +E+  GE
Sbjct: 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 56.9 bits (137), Expect = 6e-09
 Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 52/226 (23%)

Query: 54  GTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF 113
           G  G    C D +  E V IK  +     R     E  +L+ +  H       +Q++  F
Sbjct: 103 GAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAI-NHPS----IIQLKGTF 152

Query: 114 DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKP 173
            Y    C++  +  + LY +L     R+  I  +  I R +L  I ++H+  +IH D+K 
Sbjct: 153 TYNKFTCLILPRYKTDLYCYL--AAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKA 210

Query: 174 ENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTR 233
           EN+ +               + P D            + + DFG+  +       I + +
Sbjct: 211 ENIFI---------------NHPGD------------VCLGDFGAACFPVD----INANK 239

Query: 234 HY--------RAPEVILGLGWTYPCDIWSVGCILVELCTGE-ALFQ 270
           +Y         APE++    +    DIWS G +L E+ T   +LF+
Sbjct: 240 YYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285

Length = 391

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 55.9 bits (135), Expect = 7e-09
 Identities = 52/230 (22%), Positives = 94/230 (40%), Gaps = 59/230 (25%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKI--VRGIKKYREAAMI--EIEVLQQL---------- 96
           +G GTFG+V    DR  +   A+K+  +  + + ++   +  E  VL+++          
Sbjct: 9   VGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFW 68

Query: 97  AKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLL 155
            +HD+                 + ++ E + G  L+ +LR  N   F        A +++
Sbjct: 69  TEHDQ---------------RFLYMLMEYVPGGELFSYLR--NSGRFSNSTGLFYASEIV 111

Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +++ DLKPEN+LL    +IK+ D+                    A K+ D
Sbjct: 112 CALEYLHSKEIVYRDLKPENILLDKEGHIKLTDF------------------GFAKKLRD 153

Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
              T         +  T  Y APEVI   G     D W++G ++ E+  G
Sbjct: 154 RTWT---------LCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 55.8 bits (134), Expect = 9e-09
 Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 37/229 (16%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +G+G FG+V  C  R   +M A K +  + IKK +  AM   E  +L+++          
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-----NSRFV 62

Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI--ARQLLECIAFMHDL 164
           V +   ++ ++ +C+V   +      F    N  +   D  R I  A +L   +  +   
Sbjct: 63  VSLAYAYETKDALCLVLTIMNGGDLKF-HIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE 121

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +++ DLKPEN+LL    +I++ D   ++  P+                   G T   R 
Sbjct: 122 RIVYRDLKPENILLDDRGHIRISDLGLAVQIPE-------------------GETVRGR- 161

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
                V T  Y APEVI    +T+  D W +GC++ E+  G++ F+  +
Sbjct: 162 -----VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRK 205

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 55.8 bits (134), Expect = 1e-08
 Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 41/220 (18%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV----RGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++G G+FG V    +    E+VA+K +    +   +  +  + E++ LQQL KH      
Sbjct: 28  EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPN---- 82

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            ++ +  +   +   +V E    S  D L  +      +++   I    L+ +A++H   
Sbjct: 83  TIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AITHGALQGLAYLHSHN 141

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           MIH D+K  N+LL                            +   +K+ DFGS +   P 
Sbjct: 142 MIHRDIKAGNILLT---------------------------EPGQVKLADFGSASKSSP- 173

Query: 226 QNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVEL 262
            N  V T ++ APEVIL +    +    D+WS+G   +EL
Sbjct: 174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 213

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 55.0 bits (132), Expect = 2e-08
 Identities = 63/255 (24%), Positives = 101/255 (39%), Gaps = 70/255 (27%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +I   +G+GT+G+V +  +++   + A+KI+  I    E    E  +LQ L  H      
Sbjct: 25  EIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPN---- 80

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC-------- 157
            V+    F Y+    +     G  L+  L   N  S     V E+ + LL C        
Sbjct: 81  VVKFYGMF-YKADKLV-----GGQLWLVLELCNGGS-----VTELVKGLLICGQRLDEAM 129

Query: 158 IAF-----------MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 206
           I++           +H+  +IH D+K  N+LL +                          
Sbjct: 130 ISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT-------------------------- 163

Query: 207 KSSAIKVIDFGST---TYERPDQNYIVSTRHYRAPEVI-----LGLGWTYPCDIWSVGCI 258
               +K++DFG +   T  R  +N  V T  + APEVI         +   CD+WS+G  
Sbjct: 164 -EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGIT 222

Query: 259 LVELCTGE-ALFQTH 272
            +EL  G+  LF  H
Sbjct: 223 AIELGDGDPPLFDMH 237

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 55.0 bits (132), Expect = 2e-08
 Identities = 65/319 (20%), Positives = 129/319 (40%), Gaps = 77/319 (24%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G++ +VL    ++  ++ A+K+V+    + +  +  ++  + + +        V + 
Sbjct: 3   IGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLH 62

Query: 111 NWFDYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
           + F   + + +V E +  G  ++   R+   R  P +  R  A ++   + F+H+  +I+
Sbjct: 63  SCFQTTSRLFLVIEYVNGGDLMFHMQRQ---RKLPEEHARFYAAEICIALNFLHERGIIY 119

Query: 169 TDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
            DLK +NVLL +  +IK+ DY   K  L     +S F   P                   
Sbjct: 120 RDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTP------------------- 160

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
            NYI       APE++ G  + +  D W++G ++ E+  G + F                
Sbjct: 161 -NYI-------APEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI-------------- 198

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                 +    D + E Y+ +  L+ P            +++PR  ++   HV       
Sbjct: 199 ------ITDNPDMNTEDYLFQVILEKP------------IRIPRFLSVKASHV------- 233

Query: 346 THLLQGLLRYDPTDRLTAR 364
              L+G L  DP +RL  +
Sbjct: 234 ---LKGFLNKDPKERLGCQ 249

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 53.9 bits (129), Expect = 3e-08
 Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 34/241 (14%)

Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           K+  K+G G FG+V +  +++  K  VA+K ++      EA + E  V++ L +HDK   
Sbjct: 9   KLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEANVMKTL-QHDK--- 62

Query: 105 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             V++ +    +  I I+ E +   SL DFL+ +     P+  + + + Q+ E +AF+  
Sbjct: 63  -LVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 120

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              IH DL+  N+L+ +S   K+ D+  +    +D+ Y  R      IK           
Sbjct: 121 RNYIHRDLRAANILVSASLVCKIADFGLA-RVIEDNEYTAREGAKFPIK----------- 168

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE I    +T   D+WS G +L+E+ T G   +    N E +  +E
Sbjct: 169 -----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 217

Query: 283 R 283
           R
Sbjct: 218 R 218

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 54.7 bits (131), Expect = 3e-08
 Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 35/241 (14%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQL-AKHD----KGGNR 105
           +G G FG+V     ++   + A+KI+R      +A M+E E +  + A+ D         
Sbjct: 9   IGRGAFGEVRLVQKKDTGHVYAMKILR------KADMLEKEQVGHIRAERDILVEADSLW 62

Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL-----LECIA 159
            V++   F  + ++ ++ E L G  +   L K        D + E   Q      +  I 
Sbjct: 63  VVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKK-------DTLTEEETQFYIAETVLAID 115

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYK--SSLHTPKDSSYFKRMPKS--SAIKVID 215
            +H L  IH D+KP+N+LL S  ++K+ D+   + L     + +++ +  S  S     +
Sbjct: 116 SIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQN 175

Query: 216 FGST----TYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 268
             S     T++R  +      V T  Y APEV +  G+   CD WS+G I+ E+  G   
Sbjct: 176 MNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235

Query: 269 F 269
           F
Sbjct: 236 F 236

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 54.3 bits (130), Expect = 3e-08
 Identities = 59/222 (26%), Positives = 90/222 (40%), Gaps = 45/222 (20%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           ++G G+FG V    D    E+VAIK      K   +     E  Q + K  K   R ++ 
Sbjct: 32  EIGHGSFGAVYFARDVRTNEVVAIK------KMSYSGKQSNEKWQDIIKEVKFLQR-IKH 84

Query: 110 RNWFDY-----RNHIC-IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            N  +Y     R H   +V E    S  D L  +      +++   I    L+ +A++H 
Sbjct: 85  PNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AITHGALQGLAYLHS 143

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             MIH D+K  N+LL                            +   +K+ DFGS +   
Sbjct: 144 HNMIHRDIKAGNILLT---------------------------EPGQVKLADFGSASIAS 176

Query: 224 PDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVEL 262
           P  N  V T ++ APEVIL +    +    D+WS+G   +EL
Sbjct: 177 P-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 217

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 53.9 bits (129), Expect = 3e-08
 Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 36/231 (15%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDK 101
           +I  K+G G F +V           VA+K V+       K R   + EI++L+QL   + 
Sbjct: 5   RIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN- 63

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLR--KNNYRSFPIDLVREIARQLLECI 158
                ++    F   N + IV E      L   ++  K   R  P   V +   QL   +
Sbjct: 64  ----VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSAL 119

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
             MH   ++H D+KP NV + ++  +K+ D            +F    K++A        
Sbjct: 120 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGL-------GRFFSS--KTTA-------- 162

Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                   + +V T +Y +PE I   G+ +  DIWS+GC+L E+   ++ F
Sbjct: 163 -------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 54.2 bits (130), Expect = 4e-08
 Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 37/232 (15%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+V     +   +  AIK ++     +    E  M+E  VL    +H       
Sbjct: 3   LGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP----FL 58

Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI--ARQLLECIAFMHDL 164
             +   F  + ++  V E L      F  ++ ++    DL R    A +++  + F+H  
Sbjct: 59  THLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHK---FDLPRATFYAAEIICGLQFLHSK 115

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +++ DLK +N+LL +  +IK+ D+               M K + +   D  + T+   
Sbjct: 116 GIVYRDLKLDNILLDTDGHIKIADFG--------------MCKENMLG--DAKTCTF--- 156

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                  T  Y APE++LG  +    D WS G +L E+  G++ F  H+  E
Sbjct: 157 -----CGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE 203

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 54.2 bits (130), Expect = 4e-08
 Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 41/234 (17%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAA--MIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+VL    +  ++  A+K++  + I K +E    M E  VL +  KH       
Sbjct: 3   IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP----FL 58

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V +   F   + +  V + + G  L+  L++   R F     R  A ++   + ++H L 
Sbjct: 59  VGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLN 116

Query: 166 MIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
           +++ DLKPEN+LL S  +I + D+   K ++     +S F   P+               
Sbjct: 117 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPE--------------- 161

Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                       Y APEV+    +    D W +G +L E+  G   F +    E
Sbjct: 162 ------------YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 203

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 53.2 bits (128), Expect = 5e-08
 Identities = 57/248 (22%), Positives = 97/248 (39%), Gaps = 57/248 (22%)

Query: 51  MGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIE------IEVLQQLAKHDKGG 103
           +G G FG V L  W  +    VAIK++R      E AM E       +V+ +L+ H    
Sbjct: 12  LGSGQFGVVHLGKWRGKID--VAIKMIR------EGAMSEDDFIEEAKVMMKLS-HPN-- 60

Query: 104 NRCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
              VQ+      +  I IV E + +  L ++LR+   +    + + ++   + E + ++ 
Sbjct: 61  --LVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGK-LGTEWLLDMCSDVCEAMEYLE 117

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
               IH DL   N  LV  + +                          +KV DFG   Y 
Sbjct: 118 SNGFIHRDLAARNC-LVGEDNV--------------------------VKVSDFGLARYV 150

Query: 223 RPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
             DQ Y  S        +  PEV     ++   D+WS G ++ E+ +   +   +E   +
Sbjct: 151 LDDQ-YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKM--PYERFSN 207

Query: 278 LAMMERVL 285
             ++E V 
Sbjct: 208 SEVVESVS 215

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 53.3 bits (128), Expect = 5e-08
 Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)

Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           K+  K+G G FG+V +  ++   K  VAIK ++      EA + E  +++QL +H     
Sbjct: 9   KLVKKLGAGQFGEVWMGYYNGHTK--VAIKSLKQGSMSPEAFLAEANLMKQL-QH----P 61

Query: 105 RCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
           R V++      +  I I+ E + + SL DFL+        I+ + ++A Q+ E +AF+  
Sbjct: 62  RLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER 120

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              IH DL+  N+L+  +   K+ D+  +    +D+ Y  R      IK           
Sbjct: 121 KNYIHRDLRAANILVSETLCCKIADFGLA-RLIEDNEYTAREGAKFPIK----------- 168

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE I    +T   D+WS G +L E+ T G   +    N E +  +E
Sbjct: 169 -----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLE 217

Query: 283 R 283
           R
Sbjct: 218 R 218

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 53.6 bits (129), Expect = 5e-08
 Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 34/153 (22%)

Query: 117 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPE 174
             I I  E + G SL   L+K      P +++ +I+  +L  + ++ +   ++H D+KP 
Sbjct: 72  GEISICMEHMDGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPS 129

Query: 175 NVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVST 232
           N+L+ S   IK+ D+  S  L    DS                           N  V T
Sbjct: 130 NILVNSRGEIKLCDFGVSGQLI---DSM-------------------------ANSFVGT 161

Query: 233 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
           R Y +PE + G  +T   DIWS+G  LVE+  G
Sbjct: 162 RSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIG 194

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 53.1 bits (128), Expect = 5e-08
 Identities = 52/229 (22%), Positives = 97/229 (42%), Gaps = 39/229 (17%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMI-EIEVLQQLAKHDKGGNRCV 107
           G+G FG+V     R+ K+M A+K +     ++K     ++ E  +LQ+L  H       V
Sbjct: 9   GKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NH----PFLV 63

Query: 108 QIRNWFDYRNHICIVFE-KLGSSL-YDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            +   F    ++ +V +  LG  L Y   +K     F  + V+    +++  + ++H   
Sbjct: 64  NLWYSFQDEENMYLVVDLLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSKG 120

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IH D+KP+N+LL    ++ + D+  +     D+                  +T+     
Sbjct: 121 IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL-----------------TTST---- 159

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
                 T  Y APEV+   G++   D WS+G    E   G+  ++ H  
Sbjct: 160 ----SGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSR 204

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 53.1 bits (127), Expect = 7e-08
 Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 30/170 (17%)

Query: 113 FDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDL 171
           F   N++ +V +  +G  L   L K   R  P D+ R    +++  I  +H L  +H D+
Sbjct: 70  FQDENYLYLVMDYYVGGDLLTLLSKFEDR-LPEDMARFYIAEMVLAIHSIHQLHYVHRDI 128

Query: 172 KPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVS 231
           KP+NVLL  + +I++ D+ S L   +D +      +SS                    V 
Sbjct: 129 KPDNVLLDMNGHIRLADFGSCLKMNQDGTV-----QSSV------------------AVG 165

Query: 232 TRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALFQTHENLE 276
           T  Y +PE++     G+G   P CD WS+G  + E+  GE  F     +E
Sbjct: 166 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 215

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 52.9 bits (127), Expect = 9e-08
 Identities = 57/242 (23%), Positives = 99/242 (40%), Gaps = 41/242 (16%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+V+    +   E  AIK ++          E  M+E  VL    +H       
Sbjct: 3   LGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHP----FL 58

Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
             +   F  + H+  V E L      F  +++ R F     R  A +++  + F+H   +
Sbjct: 59  THLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGR-FDEARARFYAAEIICGLQFLHKKGI 117

Query: 167 IHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           I+ DLK +NVLL    +IK+ D+   K +++    +S F                     
Sbjct: 118 IYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTF--------------------- 156

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMM 281
                   T  Y APE++ G  +    D WS G +L E+  G++ F  +  + L    + 
Sbjct: 157 ------CGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN 210

Query: 282 ER 283
           +R
Sbjct: 211 DR 212

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 52.5 bits (126), Expect = 9e-08
 Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 33/162 (20%)

Query: 136 KNNYRSFPIDLVREIARQLLECIAFMH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH 194
           K   + F  + +  I  Q++  + ++H +  ++H DL P N++L   +            
Sbjct: 104 KEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDD------------ 151

Query: 195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDI 252
                           + + DFG    ++P+     +V T  Y  PE++    +    D+
Sbjct: 152 ---------------KVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADV 196

Query: 253 WSVGCILVELCTGEALFQTHENLEHLAM--MERVLGPLPQHM 292
           W+ GCIL ++CT +  F +  N+  LA   +E V  PLP+ M
Sbjct: 197 WAFGCILYQMCTLQPPFYS-TNMLSLATKIVEAVYEPLPEGM 237

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 52.8 bits (126), Expect = 1e-07
 Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 43/228 (18%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIE--VLQQLAKHD--KGGN 104
           +G G++ +VL    ++ + + A+K+V+   +    +   ++ E  V +Q + H    G +
Sbjct: 3   IGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 62

Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            C Q  +    R    I +   G  ++   R+   R  P +  R  + ++   + ++H+ 
Sbjct: 63  SCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER 115

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
            +I+ DLK +NVLL S  +IK+ DY   K  L     +S F   P               
Sbjct: 116 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP--------------- 160

Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                NYI       APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 161 -----NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 52.4 bits (125), Expect = 1e-07
 Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 41/237 (17%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHDKGGNRC 106
           +G G FG+V     +   ++ A+KI+   +  + A       E +VL        G N+ 
Sbjct: 9   IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN------GDNQW 62

Query: 107 VQIRNW-FDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
           +   ++ F   N++ +V +  +G  L   L K   R  P D+ R    +++  I  +H L
Sbjct: 63  ITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDR-LPEDMARFYLAEMVIAIDSVHQL 121

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             +H D+KP+N+L+  + +I++ D+ S L   +D +                        
Sbjct: 122 HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV----------------------- 158

Query: 225 DQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALFQTHENLE 276
             +  V T  Y +PE++     G G   P CD WS+G  + E+  GE  F     +E
Sbjct: 159 QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 215

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 45/243 (18%)

Query: 50  KMGEGTFGQVLE-CWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           K+G G FG+V    W+   K  VA+K ++      EA + E +++++L +HDK     VQ
Sbjct: 13  KLGAGQFGEVWMGTWNGTTK--VAVKTLKPGTMSPEAFLQEAQIMKKL-RHDK----LVQ 65

Query: 109 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +         I IV E +   SL DFL+    +   +  + ++A Q+ E +A++     I
Sbjct: 66  LYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYI 125

Query: 168 HTDLKPENVLLVSSEYIKVPDY------KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H DL   N+L+  +   K+ D+      +   +T ++ +   + P    IK         
Sbjct: 126 HRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGA---KFP----IK--------- 169

Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAM 280
                        + APE      +T   D+WS G +L E+ T G   +    N E L  
Sbjct: 170 -------------WTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQ 216

Query: 281 MER 283
           +ER
Sbjct: 217 VER 219

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 35/242 (14%)

Query: 46  KIHSKMGEGTFGQVLE-CWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G G FG+V E  W+      VA+K ++      +  + E +++++L +H K   
Sbjct: 9   QLLRKLGAGQFGEVWEGLWNNTTP--VAVKTLKPGTMDPKDFLAEAQIMKKL-RHPK--- 62

Query: 105 RCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             +Q+         I IV E  K GS L ++L+    R+  +  + ++A Q+   +A++ 
Sbjct: 63  -LIQLYAVCTLEEPIYIVTELMKYGS-LLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE 120

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
               IH DL   NVL+  +   KV D+  +    K+  Y  R      IK          
Sbjct: 121 AQNYIHRDLAARNVLVGENNICKVADFGLA-RVIKEDIYEAREGAKFPIK---------- 169

Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMM 281
                       + APE  L   ++   D+WS G +L E+ T G   +    N E L  +
Sbjct: 170 ------------WTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQV 217

Query: 282 ER 283
           ++
Sbjct: 218 DQ 219

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 58/262 (22%), Positives = 102/262 (38%), Gaps = 65/262 (24%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD--KGGNRCVQ 108
           +G G FG V +   +    ++A+K +R         + E E  + L   D     + C  
Sbjct: 12  IGRGAFGTVNKMLHKPSGTIMAVKRIRST-------VDEKEQKRLLMDLDVVMRSSDCPY 64

Query: 109 IRNWFDYRNH-----IC-----IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           I  ++          IC     I  +K    +Y+ L+       P +++ +IA   ++ +
Sbjct: 65  IVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSV----IPEEILGKIAVATVKAL 120

Query: 159 AFM-HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
            ++  +L +IH D+KP N+LL                            ++  IK+ DFG
Sbjct: 121 NYLKEELKIIHRDVKPSNILL---------------------------DRNGNIKLCDFG 153

Query: 218 STTYERPDQNYIVSTRH-----YRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALF 269
            +       + I  TR      Y APE I      G+    D+WS+G  L E+ TG+  +
Sbjct: 154 ISGQL---VDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPY 210

Query: 270 QTHENL-EHLAMMERVLGPLPQ 290
               ++ + L  +  V G  P 
Sbjct: 211 PKWNSVFDQLTQV--VKGDPPI 230

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 51.4 bits (124), Expect = 2e-07
 Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 47/186 (25%)

Query: 130 LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY 189
           L+D L+K          V++I RQL+E +  +H   +IH D+K ENVL            
Sbjct: 96  LFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVL------------ 141

Query: 190 KSSLHTPKDSSYFKRMPKSSAIKVIDFG-------STTYERPDQNYIVSTRHYRAPEVIL 242
                      Y +   +   I + D+G        + Y+         T  Y +PE I 
Sbjct: 142 -----------YDRAKDR---IYLCDYGLCKIIGTPSCYDG--------TLDYFSPEKIK 179

Query: 243 GLGWTYPCDIWSVGCILVELCTGEALFQTH--ENLEHLAMMERVLGPLPQHMLKRVDRHA 300
           G  +    D W+VG +  EL TG+  F+    E L+  ++++R    LP   +K V ++A
Sbjct: 180 GHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLP--FIKNVSKNA 237

Query: 301 EKYVRR 306
             +V+ 
Sbjct: 238 NDFVQS 243

Length = 267

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 51.6 bits (123), Expect = 2e-07
 Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 43/227 (18%)

Query: 43  FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIV----RGIKKYREAAMIEIEVLQQLAK 98
           F+D    ++G G+FG V    D    E+VAIK +    +   +  +  + E+  LQ+L +
Sbjct: 17  FSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-R 73

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           H       +Q R  +   +   +V E    S  D L  +      +++   +    L+ +
Sbjct: 74  HPN----TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AVTHGALQGL 128

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
           A++H   MIH D+K  N+LL                            +   +K+ DFGS
Sbjct: 129 AYLHSHNMIHRDVKAGNILLS---------------------------EPGLVKLGDFGS 161

Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVEL 262
            +   P  N  V T ++ APEVIL +    +    D+WS+G   +EL
Sbjct: 162 ASIMAP-ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 73/345 (21%), Positives = 139/345 (40%), Gaps = 77/345 (22%)

Query: 47  IHSKMGEGTFGQVLEC--WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           I S +  G+ G+V  C     E+++ V +K V G K        EI++L+ +       +
Sbjct: 96  ILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGR----EIDILKTI-------S 144

Query: 105 RCVQIR--NWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
               I   + + +++ +C+V  K    L+ ++ ++     P++    I R+LLE +A++H
Sbjct: 145 HRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVDRSG--PLPLEQAITIQRRLLEALAYLH 202

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKS------SLHTPKDSSYFKRMPKSSAIKVIDF 216
              +IH D+K EN+ L   E   + D+ +         TP+   +               
Sbjct: 203 GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGW--------------- 247

Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE-ALF--QTHE 273
                          T    +PE++    +    DIWS G +L E+      LF  Q   
Sbjct: 248 -------------SGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKS 294

Query: 274 NLEHLAMMERVLG--PL--PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 329
           +   L  + R +   PL  PQ+    + +H ++Y    R  +           ++  + R
Sbjct: 295 SSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPY-----------TIPPVIR 343

Query: 330 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
              + M        D+ +L+  +L +D   R +A++ L  P FT+
Sbjct: 344 KYGMHM--------DVEYLIAKMLTFDQEFRPSAQDILSLPLFTK 380

Length = 392

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 51.5 bits (123), Expect = 2e-07
 Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 47/241 (19%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+VL    +      A+K+++      KK +   M E  VL +  KH       
Sbjct: 3   IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHP----FL 58

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V +   F     +  V + + G  L+  L++   R F     R  A ++   I ++H L 
Sbjct: 59  VGLHYSFQTAEKLYFVLDYVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLN 116

Query: 166 MIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
           +I+ DLKPEN+LL S  ++ + D+   K  +   + +S F   P+               
Sbjct: 117 IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPE--------------- 161

Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF------QTHENLE 276
                       Y APEV+    +    D W +G +L E+  G   F      Q ++N+ 
Sbjct: 162 ------------YLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNIL 209

Query: 277 H 277
           H
Sbjct: 210 H 210

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 51.0 bits (122), Expect = 3e-07
 Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 40/218 (18%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           +G G  G V + +    + ++A+K++      + ++  M E+E+L +           + 
Sbjct: 9   LGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDS-----PYIIG 63

Query: 109 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
               F   N I I  E + G SL      + YR  P  ++  IA  +++ + ++  L ++
Sbjct: 64  FYGAFFVENRISICTEFMDGGSL------DVYRKIPEHVLGRIAVAVVKGLTYLWSLKIL 117

Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H D+KP N+L+ +   +K+ D+  S                   ++++  + TY      
Sbjct: 118 HRDVKPSNMLVNTRGQVKLCDFGVS------------------TQLVNSIAKTY------ 153

Query: 228 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
             V T  Y APE I G  +    D+WS+G   +EL  G
Sbjct: 154 --VGTNAYMAPERISGEQYGIHSDVWSLGISFMELALG 189

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 51.0 bits (122), Expect = 4e-07
 Identities = 73/334 (21%), Positives = 135/334 (40%), Gaps = 83/334 (24%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIE--VLQQLAKHD--KGGN 104
           +G G++ +VL    ++ + + A+K+++   +    +   ++ E  V +  + H    G +
Sbjct: 3   IGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLH 62

Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            C Q  +    R    I F   G  ++   R+   R  P +  R  + ++   + F+H+ 
Sbjct: 63  SCFQTES----RLFFVIEFVSGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNFLHER 115

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +I+ DLK +NVLL +  +IK+ DY               M K   I+  D  ST    P
Sbjct: 116 GIIYRDLKLDNVLLDAEGHIKLTDYG--------------MCK-EGIRPGDTTSTFCGTP 160

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
             NYI       APE++ G  + +  D W++G ++ E+  G + F      ++       
Sbjct: 161 --NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDN------- 204

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
                       D++ E Y+ +  L+              +++PR  ++    V      
Sbjct: 205 -----------PDQNTEDYLFQVILEKQ------------IRIPRSLSVKASSV------ 235

Query: 345 LTHLLQGLLRYDPTDRLTA------REALRHPFF 372
               L+G L  DP +RL        R+   HPFF
Sbjct: 236 ----LKGFLNKDPKERLGCHPQTGFRDIKSHPFF 265

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 51.3 bits (123), Expect = 4e-07
 Identities = 56/259 (21%), Positives = 95/259 (36%), Gaps = 83/259 (32%)

Query: 146 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 205
           +++ I RQ+L  +  +H   ++H D+KP+N++                            
Sbjct: 256 IIQTIMRQILFALDGLHSTGIVHRDVKPQNIIF--------------------------S 289

Query: 206 PKSSAIKVIDFGSTT------------------YERPDQNYIVSTRHYRAPEVILGLG-- 245
             S + K+ID G+                    Y  P+Q YI+ST+   AP   +     
Sbjct: 290 EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQ-YIMSTQTPSAPSAPVATALS 348

Query: 246 ---WTYPC----DIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDR 298
              W        DI+S G I +++      F    +  +L    R         LKR D 
Sbjct: 349 PVLWQLNLPDRFDIYSAGLIFLQMA-----FPNLRSDSNLIQFNR--------QLKRNDY 395

Query: 299 HAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT 358
               +  R  ++       R   + V+ L           D  AG    LL+ ++R+   
Sbjct: 396 DLVAW--RKLVEPRASPDLRRGFE-VLDL-----------DGGAG--WELLKSMMRFKGR 439

Query: 359 DRLTAREALRHPFFTRDHL 377
            R++A+ AL HP+F R+ L
Sbjct: 440 QRISAKAALAHPYFDREGL 458

Length = 566

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 50.8 bits (121), Expect = 4e-07
 Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 37/221 (16%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQQLAKHDKGGNRC 106
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 11  SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 65

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V     F     I I  E + G SL   L++   +  P +++ +++  +L  +A++ +  
Sbjct: 66  VGFYGAFYSDGEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKH 123

Query: 166 MI-HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            I H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 124 QIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 162

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                V TR Y +PE + G  ++   DIWS+G  LVEL  G
Sbjct: 163 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIG 198

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 50.6 bits (121), Expect = 4e-07
 Identities = 56/228 (24%), Positives = 92/228 (40%), Gaps = 50/228 (21%)

Query: 51  MGEGTFGQVLEC----WDRERKEM-VAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGG 103
           +G G FG+V+E       +    M VA+K+++       REA M E++++  L  H+   
Sbjct: 43  LGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHE--- 99

Query: 104 NRCVQIRNWFDYRNH---ICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                I N          I ++ E      L +FLR+       ++ +   + Q+ + +A
Sbjct: 100 ----NIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMA 155

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           F+     IH DL   NVLL   +                            +K+ DFG  
Sbjct: 156 FLASKNCIHRDLAARNVLLTHGK---------------------------IVKICDFGLA 188

Query: 220 TYERPDQNYIV--STR---HYRAPEVILGLGWTYPCDIWSVGCILVEL 262
                D NY+V  + R    + APE I    +T+  D+WS G +L E+
Sbjct: 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEI 236

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 50.4 bits (120), Expect = 5e-07
 Identities = 68/329 (20%), Positives = 132/329 (40%), Gaps = 84/329 (25%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           ++G GT+G V +  +    E+ AIK+++ ++   + A+++ E++  + K  K  N     
Sbjct: 16  RIGSGTYGDVYKARNVNTGELAAIKVIK-LEPGEDFAVVQQEII--MMKDCKHSNIVAYF 72

Query: 110 RNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPID--LVREIARQLLECIAFMHDLCM 166
            ++   R+ + I  E  G  SL D      + + P+    +  ++R+ L+ + ++H    
Sbjct: 73  GSYLR-RDKLWICMEFCGGGSLQDIY----HVTGPLSESQIAYVSRETLQGLYYLHSKGK 127

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H D+K  N+LL  + ++K+ D+  S                         +T  +R   
Sbjct: 128 MHRDIKGANILLTDNGHVKLADFGVSAQ---------------------ITATIAKRKS- 165

Query: 227 NYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGE-ALFQTHENLEHLAMME 282
              + T ++ APEV       G+   CDIW+VG   +EL   +  +F  H  +  L +M 
Sbjct: 166 --FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP-MRALFLM- 221

Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
                                                  KS  + P+L++ +       +
Sbjct: 222 --------------------------------------TKSNFQPPKLKDKMKW-----S 238

Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPF 371
               H ++  L  +P  R TA + L+HPF
Sbjct: 239 NSFHHFVKMALTKNPKKRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 49.8 bits (119), Expect = 5e-07
 Identities = 64/304 (21%), Positives = 110/304 (36%), Gaps = 94/304 (30%)

Query: 75  IVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDF 133
           I++G++K  E +   + ++     +       V +  +    + + +V +   G  L+  
Sbjct: 22  ILKGLRKSSEYSRERLTIIPHCVPN------MVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75

Query: 134 LRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL 193
           + K  + + P + V+  A +++  +  +H   ++  DL P N+LL    +I++       
Sbjct: 76  ISK--FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQL------- 126

Query: 194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIW 253
                 +YF R             S   +  D   +     Y APEV      T  CD W
Sbjct: 127 ------TYFSRW------------SEVEDSCDGEAV--ENMYCAPEVGGISEETEACDWW 166

Query: 254 SVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE 313
           S+G IL EL TG+ L + H                                       P 
Sbjct: 167 SLGAILFELLTGKTLVECH---------------------------------------PS 187

Query: 314 GAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA-----LR 368
           G  +  ++            I + V   A     LLQ LL+++PT+RL A  A       
Sbjct: 188 GINTHTTLN-----------IPEWVSEEARS---LLQQLLQFNPTERLGAGVAGVEDIKS 233

Query: 369 HPFF 372
           HPFF
Sbjct: 234 HPFF 237

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 49.9 bits (119), Expect = 6e-07
 Identities = 62/242 (25%), Positives = 101/242 (41%), Gaps = 44/242 (18%)

Query: 50  KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           ++G G FG V L  W  + K  VAIK +       E  + E +V+ +L+ H K     VQ
Sbjct: 11  ELGSGQFGVVHLGKWRAQIK--VAIKAINEGAMSEEDFIEEAKVMMKLS-HPK----LVQ 63

Query: 109 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +      +  + IV E +    L ++LR+        D++  + + + E + ++     I
Sbjct: 64  LYGVCTQQKPLYIVTEFMENGCLLNYLRQR-QGKLSKDMLLSMCQDVCEGMEYLERNSFI 122

Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DL   N  LVSS  +                          +KV DFG T Y   D+ 
Sbjct: 123 HRDLAARNC-LVSSTGV--------------------------VKVSDFGMTRYVLDDE- 154

Query: 228 YIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMM 281
           Y  S+       +  PEV     ++   D+WS G ++ E+ T G+  F+   N E + M+
Sbjct: 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMI 214

Query: 282 ER 283
            R
Sbjct: 215 SR 216

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 50.0 bits (119), Expect = 6e-07
 Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 33/241 (13%)

Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           K+  K+G G FG+V +  ++   K  VA+K ++      +A + E  +++ L +HDK   
Sbjct: 9   KLVKKLGAGQFGEVWMGYYNNSTK--VAVKTLKPGTMSVQAFLEEANLMKTL-QHDK--- 62

Query: 105 RCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             V++         I I+ E +   SL DFL+ +      +  + + + Q+ E +A++  
Sbjct: 63  -LVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 121

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              IH DL+  NVL+  S   K+ D+  +    +D+ Y  R      IK           
Sbjct: 122 KNYIHRDLRAANVLVSESLMCKIADFGLA-RVIEDNEYTAREGAKFPIK----------- 169

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE I    +T   D+WS G +L E+ T G+  +    N + ++ ++
Sbjct: 170 -----------WTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQ 218

Query: 283 R 283
           R
Sbjct: 219 R 219

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 50.0 bits (119), Expect = 9e-07
 Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 38/227 (16%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           +G G FG+V     +  +++ A+K++     IK+   A   E   +   A         V
Sbjct: 51  IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN----SPWVV 106

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           Q+   F    ++ +V E + G  L + +  +NY   P    R    +++  +  +H +  
Sbjct: 107 QLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY-DVPEKWARFYTAEVVLALDAIHSMGF 163

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           IH D+KP+N+LL  S ++K+ D+ + +          +M K   ++              
Sbjct: 164 IHRDVKPDNMLLDKSGHLKLADFGTCM----------KMNKEGMVRC------------- 200

Query: 227 NYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 269
           +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 49.8 bits (119), Expect = 1e-06
 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 27/121 (22%)

Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           +++  +  +H +  IH D+KP+N+LL  S ++K+ D+ + +          +M  +  ++
Sbjct: 150 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM----------KMDANGMVR 199

Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEAL 268
                 T    PD         Y +PEV+   G    +   CD WSVG  L E+  G+  
Sbjct: 200 C----DTAVGTPD---------YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 246

Query: 269 F 269
           F
Sbjct: 247 F 247

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 49.2 bits (117), Expect = 2e-06
 Identities = 51/227 (22%), Positives = 98/227 (43%), Gaps = 38/227 (16%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           +G G FG+V     +  +++ A+K++     IK+   A   E   +   A         V
Sbjct: 51  IGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN----SPWVV 106

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           Q+   F    ++ +V E + G  L + +  +NY   P    +    +++  +  +H + +
Sbjct: 107 QLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNY-DVPEKWAKFYTAEVVLALDAIHSMGL 163

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           IH D+KP+N+LL    ++K+ D+ + +          +M ++  ++              
Sbjct: 164 IHRDVKPDNMLLDKHGHLKLADFGTCM----------KMDETGMVRC------------- 200

Query: 227 NYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 269
           +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 36/229 (15%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G FG+V  C   +  +M A+K +      +K+    A+ E  +L  ++  D     C
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 61

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           +     F   + +C + + + G  L+  L ++    F    +R  A +++  +  MH+  
Sbjct: 62  MTYA--FHTPDKLCFILDLMNGGDLHYHLSQHGV--FSEKEMRFYATEIILGLEHMHNRF 117

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ DLKP N+LL    ++++ D   +        + K+ P +S                
Sbjct: 118 VVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS---------------- 155

Query: 226 QNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
               V T  Y APEV+  G  +    D +S+GC+L +L  G + F+ H+
Sbjct: 156 ----VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHK 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 32/152 (21%)

Query: 121 IVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVL 177
           I  E + +SL  F +K  +   + P D++ +IA  +++ + ++H  L +IH D+KP NVL
Sbjct: 77  ICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVL 136

Query: 178 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRA 237
           +  +  +K+ D+  S +              S  K ID G               + Y A
Sbjct: 137 INRNGQVKLCDFGISGYL-----------VDSVAKTIDAGC--------------KPYMA 171

Query: 238 PEVILG----LGWTYPCDIWSVGCILVELCTG 265
           PE I       G+    D+WS+G  ++EL TG
Sbjct: 172 PERINPELNQKGYDVKSDVWSLGITMIELATG 203

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 37/225 (16%)

Query: 49  SKMGEGTFGQV-LECWD---RERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHDKGG 103
            ++G+G FG V L  +D       E+VA+K ++    ++      EIE+L+ L +HD   
Sbjct: 10  QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSL-QHDN-- 66

Query: 104 NRCVQIRN--WFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
              V+ +   +   R ++ +V E L   SL D+L+K+  R     L+   A Q+ + + +
Sbjct: 67  --IVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLL-LYASQICKGMEY 123

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGST 219
           +     +H DL   N+L+ S   +K+ D+  +   P+D  Y+K R P  S I        
Sbjct: 124 LGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPI-------- 175

Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                          + APE +    ++   D+WS G +L EL T
Sbjct: 176 --------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 61/255 (23%), Positives = 99/255 (38%), Gaps = 68/255 (26%)

Query: 51  MGEGTFGQVLECWDRERKEM---VAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V++     +      VA+K ++   I   ++  + E  V+ QL         
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL--------- 53

Query: 106 CVQIRNWFDYRNHICIV----------------FEKLGSSLYDFLRKNNYRSFPIDLVRE 149
                      +H CIV                   LG  L  +L+K   R  P+  ++E
Sbjct: 54  -----------DHPCIVRLIGVCKGEPLMLVMELAPLGP-LLKYLKKR--REIPVSDLKE 99

Query: 150 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 209
           +A Q+   +A++     +H DL   NVLLV+    K+ D+  S      S Y++      
Sbjct: 100 LAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR------ 153

Query: 210 AIKVIDFGSTTYER-PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEA 267
                   +TT  R P + Y        APE I    ++   D+WS G  L E  + G  
Sbjct: 154 --------ATTAGRWPLKWY--------APECINYGKFSSKSDVWSYGVTLWEAFSYGAK 197

Query: 268 LFQTHENLEHLAMME 282
            +   +  E +AM+E
Sbjct: 198 PYGEMKGAEVIAMLE 212

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 48.9 bits (116), Expect = 2e-06
 Identities = 57/241 (23%), Positives = 95/241 (39%), Gaps = 56/241 (23%)

Query: 53  EGTFGQVLECWDR------ERKEMVAI------KIVRGIKKY-----REAAMIEIEVLQ- 94
            G FG++  C  R      E +  V        K  R I K      R A  +E E+L  
Sbjct: 158 AGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILAL 217

Query: 95  QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKN--NYRSFP-IDLVREIA 151
               H+      ++I        +  ++ +K    LY F+     +++  P +   R I 
Sbjct: 218 GRLNHEN----ILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIM 273

Query: 152 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
           +QLL  + ++HD  +IH D+K EN+ L         D K  L                  
Sbjct: 274 KQLLCAVEYIHDKKLIHRDIKLENIFLNC-------DGKIVLG----------------- 309

Query: 212 KVIDFGS-TTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 267
              DFG+   +E+  + +    V T    +PE++ G G+    DIWS G IL+++ + + 
Sbjct: 310 ---DFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDF 366

Query: 268 L 268
            
Sbjct: 367 C 367

Length = 501

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 48.0 bits (114), Expect = 3e-06
 Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 46/246 (18%)

Query: 50  KMGEGTFGQVLECWDRERK--EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           ++G G FG V +   + +K  + VA+KI   +K       ++ E+L       +  N   
Sbjct: 2   ELGSGNFGTVKKGMYKMKKSEKTVAVKI---LKNDNNDPALKDELL-------REANVMQ 51

Query: 108 QIRNWFDYRN-HIC------IVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           Q+ N +  R   IC      +V E  +LG  L  FL+KN  +      + E+  Q+   +
Sbjct: 52  QLDNPYIVRMIGICEAESWMLVMELAELGP-LNKFLQKN--KHVTEKNITELVHQVSMGM 108

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            ++ +   +H DL   NVLLV+  Y K+ D+  S     D +Y+K               
Sbjct: 109 KYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK-------------AK 155

Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEH 277
           T  + P + Y        APE +    ++   D+WS G ++ E    G+  ++  +  E 
Sbjct: 156 THGKWPVKWY--------APECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEV 207

Query: 278 LAMMER 283
             M+E 
Sbjct: 208 TQMIES 213

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 47.9 bits (114), Expect = 3e-06
 Identities = 57/245 (23%), Positives = 108/245 (44%), Gaps = 41/245 (16%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYR--EAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G FG+V  C  R   ++ A K +  + +KK +  E AM+E  +L ++  H +     
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV--HSR---FI 55

Query: 107 VQIRNWFDYRNHICIVFEKLGSS-----LYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           V +   F  +  +C+V   +        +Y+   +N    FP         Q++  +  +
Sbjct: 56  VSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENP--GFPEPRACFYTAQIISGLEHL 113

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +I+ DLKPENVLL +   +++ D                     A+++ D  S T 
Sbjct: 114 HQRRIIYRDLKPENVLLDNDGNVRISDL------------------GLAVELKDGQSKT- 154

Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLAM 280
               + Y   T  + APE++ G  + +  D +++G  L E+      F+   E +E+  +
Sbjct: 155 ----KGY-AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 209

Query: 281 MERVL 285
            +R+L
Sbjct: 210 KQRIL 214

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 48.1 bits (114), Expect = 3e-06
 Identities = 56/226 (24%), Positives = 93/226 (41%), Gaps = 39/226 (17%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+V+    +   E+ AIKI++     +    E  M+E  VL    K        
Sbjct: 8   LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPP----FL 63

Query: 107 VQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRS-FPIDLVREIARQLLECIAFMHD 163
            Q+ + F   + +  V E +  G  +Y   +   ++    +    EI+  L     F+H 
Sbjct: 64  TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLF----FLHR 119

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             +I+ DLK +NV+L S  +IK+ D+               M K   +     G TT   
Sbjct: 120 RGIIYRDLKLDNVMLDSEGHIKIADFG--------------MCKEHMVD----GVTT--- 158

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                   T  Y APE+I    +    D W+ G +L E+  G+  F
Sbjct: 159 ---RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 201

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 48.0 bits (114), Expect = 4e-06
 Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 42/236 (17%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+V+    +E   + A+K+++     +    E  M E  +L     H       
Sbjct: 3   LGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP----FL 58

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            Q+   F   + +  V E + G  L   ++K+  R F     R  A ++   + F+HD  
Sbjct: 59  TQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKG 116

Query: 166 MIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
           +I+ DLK +NVLL    + K+ D+   K  +   K +S F                    
Sbjct: 117 IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTF-------------------- 156

Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
                    T  Y APE++  + +    D W++G +L E+  G A F+  EN + L
Sbjct: 157 -------CGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEA-ENEDDL 204

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 47.5 bits (113), Expect = 5e-06
 Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 41/230 (17%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +G G FG+V     +   ++ A+KI+    + K  E A    E +VL        G  R 
Sbjct: 9   IGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLV------NGDRRW 62

Query: 107 V-QIRNWFDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
           +  +   F   N++ +V +  +G  L   L K   R  P D+ R    +++  I  +H L
Sbjct: 63  ITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDR-LPEDMARFYLAEMVLAIDSVHQL 121

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             +H D+KP+NVLL  + +I++ D+ S L    D +                        
Sbjct: 122 GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV----------------------- 158

Query: 225 DQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALF 269
             N  V T  Y +PE++     G G   P CD WS+G  + E+  GE  F
Sbjct: 159 QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPF 208

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 46.9 bits (111), Expect = 5e-06
 Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 38/219 (17%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           ++G GT+G V +  +    E+ A+KI++ ++   + ++I+ E+   + K  K  N     
Sbjct: 16  RVGSGTYGDVYKARNLHTGELAAVKIIK-LEPGDDFSLIQQEIF--MVKECKHCNIVAYF 72

Query: 110 RNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPID--LVREIARQLLECIAFMHDLCM 166
            ++   R  + I  E  G  SL D      + + P+    +  + R+ L+ +A++H    
Sbjct: 73  GSYLS-REKLWICMEYCGGGSLQDIY----HVTGPLSELQIAYVCRETLQGLAYLHSKGK 127

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H D+K  N+LL  +  +K+ D+                    A K+    +T  +R   
Sbjct: 128 MHRDIKGANILLTDNGDVKLADF------------------GVAAKIT---ATIAKRKS- 165

Query: 227 NYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVEL 262
              + T ++ APEV       G+   CDIW+VG   +EL
Sbjct: 166 --FIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 46.6 bits (111), Expect = 7e-06
 Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 57/205 (27%)

Query: 129 SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD 188
           SL D LRK+    F I  + + A Q+   + ++     IH DL   N+LL S + +K+ D
Sbjct: 81  SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGD 140

Query: 189 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR------APEVIL 242
           +             + +P++                + +Y V   H +      APE + 
Sbjct: 141 FGLM----------RALPQN----------------EDHY-VMEEHLKVPFAWCAPESLR 173

Query: 243 GLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAE 301
              +++  D+W  G  L E+ T GE               E   G     +LK++D+  E
Sbjct: 174 TRTFSHASDVWMFGVTLWEMFTYGE---------------EPWAGLSGSQILKKIDKEGE 218

Query: 302 KYVRRGRLDWPEGAASRESIKSVMK 326
                 RL+ PE  A  + I +VM 
Sbjct: 219 ------RLERPE--ACPQDIYNVML 235

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 47.3 bits (112), Expect = 7e-06
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQQLAKHDKGGNRC 106
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 11  SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 65

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V     F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ +  
Sbjct: 66  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH 123

Query: 166 MI-HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            I H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 124 KIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 162

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 163 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIG 198

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 46.4 bits (110), Expect = 1e-05
 Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 37/245 (15%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+V+    +   E+ AIK+++     +    +  M E  +L   AKH       
Sbjct: 3   LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHP----FL 58

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             +   F  ++ +  V E + G  L   ++++  R F     R  A ++   + F+H   
Sbjct: 59  TALHCCFQTKDRLFFVMEYVNGGDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHG 116

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLK +N+LL +  + K+ D+               M K   +     G TT     
Sbjct: 117 VIYRDLKLDNILLDAEGHCKLADFG--------------MCKEGILN----GVTT----- 153

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT--HENLEHLAMMER 283
                 T  Y APE++  L +    D W++G ++ E+  G+  F+    ++L    + + 
Sbjct: 154 -TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDD 212

Query: 284 VLGPL 288
           VL P+
Sbjct: 213 VLYPV 217

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 45.7 bits (108), Expect = 1e-05
 Identities = 56/239 (23%), Positives = 99/239 (41%), Gaps = 32/239 (13%)

Query: 50  KMGEGTFGQVLECWDRERKEM--VAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++G G FG V +   + RK+   VAIK+++    K  R+  M E E++ QL         
Sbjct: 2   ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDN-----PY 56

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            V++    +    + ++    G  L  FL         +  V E+  Q+   + ++    
Sbjct: 57  IVRMIGVCEAEALMLVMEMASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKN 115

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
            +H DL   NVLLV+  Y K+ D+  S     D SY+K               +  + P 
Sbjct: 116 FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK-------------ARSAGKWPL 162

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLAMMER 283
           + Y        APE I    ++   D+WS G  + E    G+  ++  +  E ++ +E+
Sbjct: 163 KWY--------APECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQ 213

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 51/232 (21%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-------REAAMIEIEVLQQLAKHDKGG 103
           +G+G+FG+V+    +   E+ AIKI   +KK         E  M+E  VL    K     
Sbjct: 8   LGKGSFGKVMLAERKGTDELYAIKI---LKKDVIIQDDDVECTMVEKRVLALPGK----P 60

Query: 104 NRCVQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRS-FPIDLVREIARQLLECIAF 160
               Q+ + F   + +  V E +  G  +Y   +   ++    +    EIA  L     F
Sbjct: 61  PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLF----F 116

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           +H   +I+ DLK +NV+L +  +IK+ D+   K ++   K +  F   P           
Sbjct: 117 LHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTP----------- 165

Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +YI       APE+I    +    D W+ G +L E+  G+  F
Sbjct: 166 ---------DYI-------APEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPF 201

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 45.7 bits (108), Expect = 2e-05
 Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 36/229 (15%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G FG+V  C   +  +M A+K +      +K+    A+ E  +L  ++  D     C
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 61

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           +     F   + +  + + + G  L+  L ++    F    +R  A +++  +  MH+  
Sbjct: 62  MSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEAEMRFYAAEIILGLEHMHNRF 117

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ DLKP N+LL    ++++ D   +        + K+ P +S                
Sbjct: 118 VVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS---------------- 155

Query: 226 QNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
               V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+
Sbjct: 156 ----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 45.7 bits (108), Expect = 2e-05
 Identities = 52/246 (21%), Positives = 92/246 (37%), Gaps = 61/246 (24%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA--------MIEIEVLQQLAKHD-- 100
           +GEG FG+V++      K       V  +K  +E A        + E  +L+Q+      
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTV-AVKMLKENASSSELRDLLSEFNLLKQVNHPHVI 66

Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKN----------------------N 138
           K    C Q     D    + + + K GS L  FLR++                      +
Sbjct: 67  KLYGACSQ-----DGPLLLIVEYAKYGS-LRSFLRESRKVGPSYLGSDGNRNSSYLDNPD 120

Query: 139 YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD 198
            R+  +  +   A Q+   + ++ ++ ++H DL   NVL+     +K+ D+  S    ++
Sbjct: 121 ERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEE 180

Query: 199 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCI 258
            SY KR      +K                      + A E +    +T   D+WS G +
Sbjct: 181 DSYVKRSKGRIPVK----------------------WMAIESLFDHIYTTQSDVWSFGVL 218

Query: 259 LVELCT 264
           L E+ T
Sbjct: 219 LWEIVT 224

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 41/252 (16%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+V+    +   E+ AIKI++     +    E  M+E  VL    K        
Sbjct: 8   LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPP----FL 63

Query: 107 VQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRS-FPIDLVREIARQLLECIAFMHD 163
            Q+ + F   + +  V E +  G  +Y   +   ++    +    EIA  L     F+H 
Sbjct: 64  TQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLF----FLHS 119

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             +I+ DLK +NV+L S  +IK+ D+               M K +       G TT   
Sbjct: 120 KGIIYRDLKLDNVMLDSEGHIKIADFG--------------MCKENMWD----GVTT--- 158

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-AMME 282
                   T  Y APE+I    +    D W+ G +L E+  G+A F+  +  E   ++ME
Sbjct: 159 ---KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 215

Query: 283 RVLGPLPQHMLK 294
             +   P+ M K
Sbjct: 216 HNVA-YPKSMSK 226

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 39/251 (15%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +   ++G GT GQV +   ++   ++A+K +R      E   I +++   L  HD     
Sbjct: 18  ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHD----- 72

Query: 106 C---VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
           C   V+   +F   + + I  E + + L D L K      P D++ ++   +++ + ++ 
Sbjct: 73  CPYIVKCYGYFITDSDVFICMELMSTCL-DKLLKRIQGPIPEDILGKMTVAIVKALHYLK 131

Query: 163 DL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           +   +IH D+KP N+LL +S  +K+ D+  S           R+  S A K    G   Y
Sbjct: 132 EKHGVIHRDVKPSNILLDASGNVKLCDFGIS----------GRLVDSKA-KTRSAGCAAY 180

Query: 222 ---ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
              ER D          RA             D+WS+G  LVEL TG+  F         
Sbjct: 181 MAPERIDPPDPNPKYDIRA-------------DVWSLGISLVELATGQ--FPYKNCKTEF 225

Query: 279 AMMERVLGPLP 289
            ++ ++L   P
Sbjct: 226 EVLTKILQEEP 236

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 44.9 bits (106), Expect = 3e-05
 Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 43/185 (23%)

Query: 127 GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV 186
           G  ++  L + +   F  D VR  + +++  +  +H L +++ D+K EN+LL S  ++ +
Sbjct: 89  GGEMFTHLYQRDN--FSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVL 146

Query: 187 PDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG 243
            D+   K  L   K+ +Y              F  T               Y APE+I G
Sbjct: 147 TDFGLSKEFLSEEKERTY-------------SFCGTI-------------EYMAPEIIRG 180

Query: 244 -LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER-----------VLGPLPQH 291
             G     D WS+G ++ EL TG + F         + + R            +GP  Q 
Sbjct: 181 KGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQD 240

Query: 292 MLKRV 296
           +L ++
Sbjct: 241 LLHKL 245

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 45.1 bits (107), Expect = 3e-05
 Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 34/226 (15%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ-----LAKHDKGG 103
           + +G G FG+VL    ++  E+ AIK    +KK    A  E+E L          + +  
Sbjct: 5   AVLGRGHFGKVLLAEYKKTGELYAIKA---LKKGDIIARDEVESLMCEKRIFETANSERH 61

Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
              V +   F   +H+C V E       D +   +   F        A  ++  + ++H+
Sbjct: 62  PFLVNLFACFQTEDHVCFVMEYAAGG--DLMMHIHTDVFSEPRAVFYAACVVLGLQYLHE 119

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             +++ DLK +N+LL +  ++K+ D+               + K      + FG  T   
Sbjct: 120 NKIVYRDLKLDNLLLDTEGFVKIADFG--------------LCKEG----MGFGDRT--- 158

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +    T  + APEV+    +T   D W +G ++ E+  GE+ F
Sbjct: 159 ---STFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPF 201

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 44.4 bits (105), Expect = 5e-05
 Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 31/117 (26%)

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           +H   +I+ DLKPEN+LL +  ++K+ D+   K S+H                      G
Sbjct: 116 LHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE---------------------G 154

Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           + T+          T  Y APE+++  G     D WS+G ++ ++ TG   F T EN
Sbjct: 155 TVTHT------FCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPF-TAEN 204

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 44.2 bits (104), Expect = 5e-05
 Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 29/138 (21%)

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H L +I+ D+K EN+LL S+ ++ + D+  S                      +F    
Sbjct: 121 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK---------------------EFHEDE 159

Query: 221 YERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEH 277
            ER        T  Y AP+++ G   G     D WS+G ++ EL TG + F    E    
Sbjct: 160 VERAYS--FCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ 217

Query: 278 LAMMERVLG---PLPQHM 292
             +  R+L    P PQ M
Sbjct: 218 AEISRRILKSEPPYPQEM 235

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 43.5 bits (103), Expect = 8e-05
 Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 26/140 (18%)

Query: 129 SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD 188
           SL  FLR+N+ +     LV  + R +   + ++ ++  +H DL   N+L+ S+   KV D
Sbjct: 91  SLDKFLRENDGKFTVGQLVG-MLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSD 149

Query: 189 YKSSLHT-PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWT 247
           +  S      +++Y  +  K                           + APE I    +T
Sbjct: 150 FGLSRRLEDSEATYTTKGGKIPI-----------------------RWTAPEAIAYRKFT 186

Query: 248 YPCDIWSVGCILVELCT-GE 266
              D+WS G ++ E+ + GE
Sbjct: 187 SASDVWSFGIVMWEVMSYGE 206

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 43.9 bits (103), Expect = 1e-04
 Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 25/125 (20%)

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   M+H DLK  N+ L+ +  IK+ D+  S       S             +D  S+ 
Sbjct: 185 VHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS-------------LDVASS- 230

Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                      T +Y APE+     ++   D+WS+G IL EL T    F+     E   +
Sbjct: 231 --------FCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE---I 279

Query: 281 MERVL 285
           M++VL
Sbjct: 280 MQQVL 284

Length = 478

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 41/227 (18%)

Query: 46  KIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAK 98
           KI   +G G FG+V  C  R     +R+  VAIK ++    +K R   + E  ++ Q   
Sbjct: 7   KIEKVIGAGEFGEV--CSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDH 64

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
            +      + +         + IV E +   SL  FLRK++ +   I LV  + R +   
Sbjct: 65  PN-----IIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLV-GMLRGIASG 118

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVID 215
           + ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K        
Sbjct: 119 MKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK-------- 170

Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
                         +  R + APE I    +T   D+WS G ++ E+
Sbjct: 171 --------------IPIR-WTAPEAIAYRKFTSASDVWSYGIVMWEV 202

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 57/254 (22%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK------HDKGG 103
           ++G G FG V++      +  VAIK+++      E +M E E +++ AK      H+K  
Sbjct: 11  ELGTGQFG-VVKYGKWRGQYDVAIKMIK------EGSMSEDEFIEE-AKVMMKLSHEK-- 60

Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
              VQ+      +  I IV E + +  L ++LR++  R  P  L+ E+ + + E +A++ 
Sbjct: 61  --LVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLL-EMCKDVCEGMAYLE 117

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
               IH DL   N L+                                +KV DFG + Y 
Sbjct: 118 SKQFIHRDLAARNCLVDD---------------------------QGCVKVSDFGLSRYV 150

Query: 223 RPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEA---LFQTHE 273
             D+ Y  S        +  PEV+L   ++   D+W+ G ++ E+ + G+     F   E
Sbjct: 151 LDDE-YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE 209

Query: 274 NLEHLAMMERVLGP 287
            +E ++   R+  P
Sbjct: 210 TVEKVSQGLRLYRP 223

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 25/132 (18%)

Query: 142 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 201
           F    VR    +++  +  +H L +I+ D+K EN+LL S  ++ + D+  S         
Sbjct: 102 FTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSK-------- 153

Query: 202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCIL 259
                        +F +   ER        T  Y APEVI G   G     D WS+G + 
Sbjct: 154 -------------EFLAEEEER--AYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLT 198

Query: 260 VELCTGEALFQT 271
            EL TG + F  
Sbjct: 199 FELLTGASPFTV 210

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 42.2 bits (99), Expect = 2e-04
 Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 40/225 (17%)

Query: 51  MGEGTFGQVLEC-WDRE---RKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHD--KG 102
           +GEG FG+V  C +D E     E VA+K ++        A +  EIE+L+ L   +  K 
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71

Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREI--ARQLLECIA 159
              C +     D  N I ++ E L S SL ++L +N  +   I+L +++  A Q+ + + 
Sbjct: 72  KGICTE-----DGGNGIKLIMEFLPSGSLKEYLPRNKNK---INLKQQLKYAVQICKGMD 123

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++     +H DL   NVL+ S   +K+ D+  +     D  Y+                T
Sbjct: 124 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYY----------------T 167

Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
             +  D     S   + APE ++   +    D+WS G  L EL T
Sbjct: 168 VKDDLD-----SPVFWYAPECLIQSKFYIASDVWSFGVTLYELLT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 61/254 (24%), Positives = 101/254 (39%), Gaps = 40/254 (15%)

Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA--KHDKGGN 104
           +  K+G G +G+V E   ++    VA+K ++      E  M   E L++ A  K  K  N
Sbjct: 10  MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVEEFLKEAAVMKEIKHPN 63

Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+           I+ E +   +L D+LR+ N +     ++  +A Q+   + ++  
Sbjct: 64  -LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 122

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              IH DL   N L+  +  +KV D+  S       +Y         IK           
Sbjct: 123 KNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK----------- 170

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLE 276
                      + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE
Sbjct: 171 -----------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 219

Query: 277 HLAMMERVLGPLPQ 290
               MER  G  P+
Sbjct: 220 KGYRMERPEGCPPK 233

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 42.5 bits (100), Expect = 3e-04
 Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 29/141 (20%)

Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  +  +H   MIH D+K  N+LL S+  +K+ D+            F +M   +A  
Sbjct: 151 QVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFG-----------FSKM--YAATV 197

Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
             D G T            T +Y APE+     ++   D++S+G +L EL T +  F   
Sbjct: 198 SDDVGRT---------FCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDG- 247

Query: 273 ENLEHLAMMERVLG----PLP 289
           EN+E +  M + L     PLP
Sbjct: 248 ENMEEV--MHKTLAGRYDPLP 266

Length = 496

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 41.7 bits (98), Expect = 4e-04
 Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 37/221 (16%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCV 107
           ++G G  G V +   R    + A+K++ G  +   R     EIE+L+    H       V
Sbjct: 81  RIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRD-VNHPN----VV 135

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +  + FD+   I ++ E + G SL           F  D+    ARQ+L  IA++H   +
Sbjct: 136 KCHDMFDHNGEIQVLLEFMDGGSLEG--THIADEQFLADV----ARQILSGIAYLHRRHI 189

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
           +H D+KP N+L+ S++ +K+ D+  S  L    D       P +S++  I + S      
Sbjct: 190 VHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD-------PCNSSVGTIAYMSPERINT 242

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
           D N+              G    Y  DIWS+G  ++E   G
Sbjct: 243 DLNH--------------GAYDGYAGDIWSLGVSILEFYLG 269

Length = 353

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 41.2 bits (96), Expect = 4e-04
 Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 51/239 (21%)

Query: 47  IHSKMGEGTFGQVL--ECWD---RERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHD 100
           +  ++GEG FG+V   EC++    + K +VA+K ++      R+    E E+L  L +H+
Sbjct: 9   LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHE 67

Query: 101 ---KGGNRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSF-------PIDLVR- 148
              K    CV+        + + +VFE +    L  FLR +   +        P +L + 
Sbjct: 68  HIVKFYGVCVE-------GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQS 120

Query: 149 ---EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 205
               IA+Q+   + ++     +H DL   N L+  +  +K+ D+  S             
Sbjct: 121 QMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR------------ 168

Query: 206 PKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                    D  ST Y R   + ++  R +  PE I+   +T   D+WS+G +L E+ T
Sbjct: 169 ---------DVYSTDYYRVGGHTMLPIR-WMPPESIMYRKFTTESDVWSLGVVLWEIFT 217

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 42.1 bits (99), Expect = 5e-04
 Identities = 42/176 (23%), Positives = 69/176 (39%), Gaps = 46/176 (26%)

Query: 143 PIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF 202
             +  R +  Q+L+ +A  H+  ++H DLKP+N+++  +                     
Sbjct: 78  AGETGRLML-QVLDALACAHNQGIVHRDLKPQNIMVSQTG-------------------- 116

Query: 203 KRMPKSSAIKVIDFGSTT----YERPDQNYI------VSTRHYRAPEVILGLGWTYPCDI 252
                    KV+DFG  T        D   +      + T  Y APE + G   T   D+
Sbjct: 117 ----VRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDL 172

Query: 253 WSVGCILVELCTGEALFQTHENLEHLAMMERVLGP----LPQ----HMLKRVDRHA 300
           ++ G I +E  TG+ + Q     E   ++ + L P    LP     H L +V R A
Sbjct: 173 YAWGLIFLECLTGQRVVQGASVAE---ILYQQLSPVDVSLPPWIAGHPLGQVLRKA 225

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 41.0 bits (96), Expect = 5e-04
 Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 35/225 (15%)

Query: 46  KIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAK 98
           KI   +G G FG+V  C  R     +R+  VAIK ++    +K R   + E  ++ Q   
Sbjct: 7   KIEEVIGAGEFGEV--CRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 64

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
            +      + +         + I+ E +   +L  FLR+N+ +   I LV  + R +   
Sbjct: 65  PN-----IIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLV-GMLRGIAAG 118

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + ++ ++  +H DL   N+L+ S+   KV D+  S     D+S                 
Sbjct: 119 MKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS----------------- 161

Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
             TY       I     + APE I    +T   D+WS G ++ E+
Sbjct: 162 DPTYTSSLGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 204

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 40.9 bits (96), Expect = 5e-04
 Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 50/226 (22%)

Query: 50  KMGEGTFGQVLE-CWDRERKEMVAIKIV-RGIKKYREAAMIEIEVLQQLAKHDK------ 101
           K+G G FG+V E  W    +  VAIKI+       ++    E++ L++L +H        
Sbjct: 13  KLGSGYFGEVWEGLWKNRVR--VAIKILKSDDLLKQQDFQKEVQALKRL-RHKHLISLFA 69

Query: 102 --GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                  V I         I  + EK   SL  FLR    +  P+  + ++A Q+ E +A
Sbjct: 70  VCSVGEPVYI---------ITELMEK--GSLLAFLRSPEGQVLPVASLIDMACQVAEGMA 118

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYI-KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
           ++ +   IH DL   N+ LV  + + KV D+  +    K+  Y   +     I       
Sbjct: 119 YLEEQNSIHRDLAARNI-LVGEDLVCKVADFGLA-RLIKEDVY---LSSDKKIPY----- 168

Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                           + APE      ++   D+WS G +L E+ T
Sbjct: 169 ---------------KWTAPEAASHGTFSTKSDVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 40.2 bits (94), Expect = 9e-04
 Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 48/230 (20%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           ++G+G +G V +   R     +A+K +R      K+ +  M E+++L     H       
Sbjct: 8   ELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIM-ELDIL-----HKAVSPYI 61

Query: 107 VQIRNWFDYRN--HICIVFEKLGS--SLYDFLRKNNYRSFPIDLVREIARQLLECIAFM- 161
           V     F      ++C+ +   GS   LY           P D++R I   +++ + F+ 
Sbjct: 62  VDFYGAFFIEGAVYMCMEYMDAGSLDKLYA--GGVATEGIPEDVLRRITYAVVKGLKFLK 119

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
            +  +IH D+KP NVL+  +  +K+ D+  S       +    + K++            
Sbjct: 120 EEHNIIHRDVKPTNVLVNGNGQVKLCDFGVS------GNLVASLAKTN------------ 161

Query: 222 ERPDQNYIVSTRHYRAPEVILGLG------WTYPCDIWSVGCILVELCTG 265
                   +  + Y APE I   G      +T   D+WS+G  ++E+  G
Sbjct: 162 --------IGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALG 203

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 40.3 bits (94), Expect = 0.001
 Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 36/234 (15%)

Query: 51  MGEGTFGQVLECWDRE--RKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +G G FG+V     +   RKE+ VAIK ++    +K R+  + E  ++ Q + H+     
Sbjct: 13  IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHN----- 67

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYD-FLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            +++           I+ E + +   D +LR ++       LV  + R +   + ++ D+
Sbjct: 68  IIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLV-GMLRGIAAGMKYLSDM 126

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI-DFGSTTYER 223
             +H DL   N+L+ S+   KV D+  S                   +V+ D    TY  
Sbjct: 127 NYVHRDLAARNILVNSNLECKVSDFGLS-------------------RVLEDDPEGTYTT 167

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 276
                 +    + APE I    +T   D+WS G ++ E+ + GE  +    N E
Sbjct: 168 SGGKIPI---RWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE 218

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 66/268 (24%), Positives = 103/268 (38%), Gaps = 58/268 (21%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           + +G+G FG V+    R +K  VA+K ++      +A + E  V+  L +H       VQ
Sbjct: 12  ATIGKGEFGDVMLGDYRGQK--VAVKCLKDDSTAAQAFLAEASVMTTL-RHPN----LVQ 64

Query: 109 IRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +       N + IV E +   SL D+LR        +      A  + E + ++ +   +
Sbjct: 65  LLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFV 124

Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DL   NV LVS + +                           KV DFG        Q+
Sbjct: 125 HRDLAARNV-LVSEDLVA--------------------------KVSDFGLAKEASQGQD 157

Query: 228 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGP 287
                  + APE +    ++   D+WS G +L E+ +                  RV  P
Sbjct: 158 SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS----------------FGRV--P 199

Query: 288 LPQHMLKRVDRHAEK-YVRRGRLDWPEG 314
            P+  LK V  H EK Y    R++ PEG
Sbjct: 200 YPRIPLKDVVPHVEKGY----RMEAPEG 223

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 10/109 (9%)

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS--SAIKVID 215
           I ++H   ++H DLKP+N+LL     + + D+ +++        FK++ +     I V +
Sbjct: 126 IEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI--------FKKLEEEDLLDIDVDE 177

Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                        IV T  Y APE +LG+  +   DI+++G IL ++ T
Sbjct: 178 RNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLT 226

Length = 932

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 40.1 bits (93), Expect = 0.001
 Identities = 14/50 (28%), Positives = 34/50 (68%)

Query: 144 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL 193
           I++++ + RQ+L  +  +H + ++H D+KPEN+L+     +K+ D+ +++
Sbjct: 308 INVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAV 357

Length = 507

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 39.9 bits (93), Expect = 0.002
 Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 14/142 (9%)

Query: 54  GTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQL-AKHD----KGGNRCVQ 108
           G FG+V     +   ++ A+K+V+      +A MI   ++ Q+ A+ D          V 
Sbjct: 15  GAFGKVYLGRKKNNSKLYAVKVVK------KADMINKNMVHQVQAERDALALSKSPFIVH 68

Query: 109 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +       N++ +V E L G  +   L    Y  F  ++  +   ++   + ++H   +I
Sbjct: 69  LYYSLQSANNVYLVMEYLIGGDVKSLLHIYGY--FDEEMAVKYISEVALALDYLHRHGII 126

Query: 168 HTDLKPENVLLVSSEYIKVPDY 189
           H DLKP+N+L+ +  +IK+ D+
Sbjct: 127 HRDLKPDNMLISNEGHIKLTDF 148

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 53/219 (24%), Positives = 88/219 (40%), Gaps = 37/219 (16%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+   +G+G FG V+    R  K  VA+K ++      +A + E  V+ QL +H      
Sbjct: 9   KLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKN-DATAQAFLAEASVMTQL-RHSN---- 60

Query: 106 CVQIRNWF-DYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            VQ+     + +  + IV E +   SL D+LR         D + + +  + E + ++  
Sbjct: 61  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA 120

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              +H DL   NV LVS + +                           KV DFG T    
Sbjct: 121 NNFVHRDLAARNV-LVSEDNVA--------------------------KVSDFGLTKEAS 153

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
             Q+       + APE +    ++   D+WS G +L E+
Sbjct: 154 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 25/137 (18%)

Query: 129 SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD 188
           SL D +R++     P   +     Q+ + + ++ +  M+H +L   N+LL S   +++ D
Sbjct: 94  SLLDHVRQHRDSLDP-QRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIAD 152

Query: 189 YK-SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWT 247
           +  + L  P D  YF    K+  IK                      + A E IL   +T
Sbjct: 153 FGVADLLYPDDKKYFYSEHKTP-IK----------------------WMALESILFGRYT 189

Query: 248 YPCDIWSVGCILVELCT 264
           +  D+WS G  + E+ +
Sbjct: 190 HQSDVWSYGVTVWEMMS 206

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 38.7 bits (90), Expect = 0.003
 Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 19/161 (11%)

Query: 145 DLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 204
           D+++ +A ++   + ++H    IH+DL   N  L +   +K+ DY  +L    +  Y  +
Sbjct: 100 DVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK 159

Query: 205 MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
              +  ++ +         P+   +V  R       +L    T   +IWS+G  + EL T
Sbjct: 160 DCHAVPLRWLA--------PE---LVEIRGQD----LLPKDQTKKSNIWSLGVTMWELFT 204

Query: 265 -GEALFQTHENLEHLA--MMERVLG-PLPQHMLKRVDRHAE 301
             +  +    + + L   + E+ +  P PQ  LK  DR  E
Sbjct: 205 AADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYE 245

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	379
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
PTZ00284	467	protein kinase; Provisional	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
KOG1290	590	consensus Serine/threonine protein kinase [Signal	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG1027	903	consensus Serine/threonine protein kinase and endo	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
KOG1167	418	consensus Serine/threonine protein kinase of the C	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
PLN03224	507	probable serine/threonine protein kinase; Provisio	100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.98
KOG1152	772	consensus Signal transduction serine/threonine kin	99.98
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.97
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.97
PLN00181	793	protein SPA1-RELATED; Provisional	99.97
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.97
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.97
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.96
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.96
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.95
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.94
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.94
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.93
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.93
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.92
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.9
PRK09188	365	serine/threonine protein kinase; Provisional	99.89
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.89
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.89
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.89
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.89
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.88
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.87
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.85
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.85
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.83
PRK12274	218	serine/threonine protein kinase; Provisional	99.82
PRK10345	210	hypothetical protein; Provisional	99.82
smart00090	237	RIO RIO-like kinase.	99.79
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.79
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.75
PRK14879	211	serine/threonine protein kinase; Provisional	99.72
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.7
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.7
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.67
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.66
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.64
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.62
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.59
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.59
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.58
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.56
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.53
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.42
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.36
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.35
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.3
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.23
KOG1243	690	consensus Protein kinase [General function predict	99.2
KOG3087	229	consensus Serine/threonine protein kinase [General	99.07
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.03
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.02
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.02
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.96
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.96
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.87
PRK09902	216	hypothetical protein; Provisional	98.8
COG4248	637	Uncharacterized protein with protein kinase and he	98.63
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.57
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.51
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.49
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.46
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.35
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.35
PF01636	239	APH: Phosphotransferase enzyme family This family	98.24
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.22
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.21
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.0
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.98
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.89
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.86
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.84
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.82
KOG2270	520	consensus Serine/threonine protein kinase involved	97.6
PLN02876	822	acyl-CoA dehydrogenase	97.57
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.54
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.46
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.42
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.31
PRK05231	319	homoserine kinase; Provisional	97.29
KOG1093	725	consensus Predicted protein kinase (contains TBC a	97.24
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.11
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.05
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	96.73
KOG2268	465	consensus Serine/threonine protein kinase [Signal	96.64
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.56
PLN02236	344	choline kinase	96.49
PRK12396	409	5-methylribose kinase; Reviewed	96.18
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	96.11
PRK11768	325	serine/threonine protein kinase; Provisional	95.8
PRK10593	297	hypothetical protein; Provisional	95.72
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	95.61
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	95.59
PLN02756	418	S-methyl-5-thioribose kinase	95.55
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	95.2
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	94.83
PRK06148	1013	hypothetical protein; Provisional	94.69
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	94.64
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	94.61
COG2334	331	Putative homoserine kinase type II (protein kinase	94.51
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	94.42
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	94.06
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	93.56
PHA03111	444	Ser/Thr kinase; Provisional	93.3
PTZ00384	383	choline kinase; Provisional	92.18
KOG1236	565	consensus Predicted unusual protein kinase [Genera	91.98

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.2e-56  Score=398.27  Aligned_cols=258  Identities=29%  Similarity=0.468  Sum_probs=216.2

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch--------hhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      -.|-+.+.||+|+||.|-+|..+.||+.||||++++...        ......+|+++|+++     +||+|++++++|+
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-----~HP~IV~~~d~f~  246 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-----SHPNIVRIKDFFE  246 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-----CCCCEEEEeeeee
Confidence            357788999999999999999999999999999974211        123346899999999     8899999999999


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      .++..|+||||+ ||+|.+.+-.++  .+.+.....++.|++.||.|||++||+||||||+|||+..+            
T Consensus       247 ~~ds~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~------------  312 (475)
T KOG0615|consen  247 VPDSSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSND------------  312 (475)
T ss_pred             cCCceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccC------------
Confidence            999999999999 999999998765  68888999999999999999999999999999999999543            


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCC---CCCccchHhHHHHHHHHHhCCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~---~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                                  ..+..+||+|||+|+..+..+  .+.+||+.|.|||++.+..   +..++|+|||||++|.+++|.+|
T Consensus       313 ------------~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pP  380 (475)
T KOG0615|consen  313 ------------AEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPP  380 (475)
T ss_pred             ------------CcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCC
Confidence                        356889999999999875443  6789999999999998755   33588999999999999999999


Q ss_pred             CCCCchHH-HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          269 FQTHENLE-HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       269 f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      |....... ..+++.+...+.-                                             ...|...+.++.+
T Consensus       381 FS~~~~~~sl~eQI~~G~y~f~---------------------------------------------p~~w~~Iseea~d  415 (475)
T KOG0615|consen  381 FSEEYTDPSLKEQILKGRYAFG---------------------------------------------PLQWDRISEEALD  415 (475)
T ss_pred             cccccCCccHHHHHhcCccccc---------------------------------------------ChhhhhhhHHHHH
Confidence            97643322 3334433222211                                             1234568889999


Q ss_pred             HHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          348 LLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ||.+||+.||++|||++|+|+||||+...
T Consensus       416 lI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  416 LINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             HHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            99999999999999999999999999654

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-54  Score=383.07  Aligned_cols=324  Identities=60%  Similarity=1.013  Sum_probs=289.4

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCC-CCCeeEEecceeeecceEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK-GGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~-~~~~i~~~~~~~~~~~~~~  120 (379)
                      ...|+|++.+|+|.||.|-.++|..++..||||++++-.+.++.+..|+++++++...++ +...++.+.+||+..++.|
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC  167 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC  167 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence            568999999999999999999999999999999999888889999999999999988774 4456999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      ||+|.+|-|+.+++..+...+++...++.+..|+++++++||+.+++|-||||+||++.+....+..+.+..       .
T Consensus       168 ivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~-------~  240 (415)
T KOG0671|consen  168 IVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKK-------V  240 (415)
T ss_pred             EEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCc-------c
Confidence            999999999999999988788999999999999999999999999999999999999987766655544432       2


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                      ++....++..++++|||.|..........+.|..|.|||++.+-+++.++||||+||||+|+.+|...|++.++.|....
T Consensus       241 ~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaM  320 (415)
T KOG0671|consen  241 CFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAM  320 (415)
T ss_pred             ceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHH
Confidence            22334667889999999999888888888999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      +++++|++|..+..+..  ..++..++.++|++...... .+.+...+......+...+.....+.|||++||.+||.+|
T Consensus       321 MerIlGp~P~~mi~r~~--~~Kyf~~~rldw~e~~~~~~-~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~R  397 (415)
T KOG0671|consen  321 MERILGPIPSRMIKKTR--KEKYFRRGRLDWPEVSSKGK-SKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARR  397 (415)
T ss_pred             HHHhhCCCcHHHhhhhh--hHhhhhcccccCcccccccc-chhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccc
Confidence            99999999999987755  77888888999998877665 5666666777777777777888889999999999999999


Q ss_pred             cCHHHHhcCCCCCCC
Q 017021          361 LTAREALRHPFFTRD  375 (379)
Q Consensus       361 pta~e~l~hp~f~~~  375 (379)
                      +|+.|+|.||||+.-
T Consensus       398 iTl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  398 ITLREALSHPFFARL  412 (415)
T ss_pred             ccHHHHhcCHHhhcC
Confidence            999999999999864

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.3e-53  Score=398.92  Aligned_cols=249  Identities=32%  Similarity=0.516  Sum_probs=227.2

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeec----cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ..|+..+.||+|||+.||.+++..+|+.||+|++.+    ....+....+|+++.+.+     .|+|||+++++|++.++
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L-----~HpnIV~f~~~FEDs~n   92 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL-----KHPNIVQFYHFFEDSNN   92 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc-----CCCcEEeeeeEeecCCc
Confidence            679999999999999999999999999999999975    566788888999999998     88999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      +|+|.|+| .++|..++++..  .+++.+++.++.||+.||.|||+.+|+|||||..|+++                   
T Consensus        93 VYivLELC~~~sL~el~Krrk--~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL-------------------  151 (592)
T KOG0575|consen   93 VYIVLELCHRGSLMELLKRRK--PLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL-------------------  151 (592)
T ss_pred             eEEEEEecCCccHHHHHHhcC--CCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee-------------------
Confidence            99999999 899999998554  79999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                              +.+..+||+|||+|.....+   ..+.+|||-|+|||++.....++.+||||+||++|.|+.|++||...+-
T Consensus       152 --------~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v  223 (592)
T KOG0575|consen  152 --------NENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV  223 (592)
T ss_pred             --------cCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH
Confidence                    67788999999999876633   4678999999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .++...|.......|.                                                 ..+.++++||++||+
T Consensus       224 kety~~Ik~~~Y~~P~-------------------------------------------------~ls~~A~dLI~~lL~  254 (592)
T KOG0575|consen  224 KETYNKIKLNEYSMPS-------------------------------------------------HLSAEAKDLIRKLLR  254 (592)
T ss_pred             HHHHHHHHhcCccccc-------------------------------------------------ccCHHHHHHHHHHhc
Confidence            8888777776555553                                                 367899999999999


Q ss_pred             cCCCCCcCHHHHhcCCCCCC
Q 017021          355 YDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f~~  374 (379)
                      .||.+|||+++||.|+||+.
T Consensus       255 ~~P~~Rpsl~~vL~h~Ff~~  274 (592)
T KOG0575|consen  255 PNPSERPSLDEVLDHPFFKS  274 (592)
T ss_pred             CCcccCCCHHHHhcCHhhhC
Confidence            99999999999999999954

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=8e-53  Score=399.22  Aligned_cols=310  Identities=39%  Similarity=0.689  Sum_probs=255.7

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCC-CCeeEEecceeeecceEEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKG-GNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~-~~~i~~~~~~~~~~~~~~l  121 (379)
                      +.|.|.+.||+|+||.|-+|++..|++.||||++++....-.....|+.+|..+..++.. ..|+++++++|...+|.||
T Consensus       186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            377899999999999999999999999999999998888888889999999999865543 4689999999999999999


Q ss_pred             EEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          122 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      |+|+.+.+|.++++......++...++.++.||+.||.+||+.||||+||||+|||+..                     
T Consensus       266 VfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~---------------------  324 (586)
T KOG0667|consen  266 VFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKD---------------------  324 (586)
T ss_pred             eehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeecc---------------------
Confidence            99999999999999987778999999999999999999999999999999999999965                     


Q ss_pred             cccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM  281 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~  281 (379)
                          .....+|++|||.|......--....+..|.|||++.+.+|+.+.||||||||++||++|.+.|.+.++.+++..|
T Consensus       325 ----~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I  400 (586)
T KOG0667|consen  325 ----PKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARI  400 (586)
T ss_pred             ----CCcCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHH
Confidence                3445899999999987666666678899999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCCChhHHHhhhhhhhhhhc-cCCCCCCCCCCch------h--hh----hhhccch-hhHHHHHHhhccchhHHHH
Q 017021          282 ERVLGPLPQHMLKRVDRHAEKYVR-RGRLDWPEGAASR------E--SI----KSVMKLP-RLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------~--~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~  347 (379)
                      .+.+|.+|..+++.......-+.. .+.+.........      +  ..    ......| .............-..+.|
T Consensus       401 ~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~d  480 (586)
T KOG0667|consen  401 IEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFID  480 (586)
T ss_pred             HHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHH
Confidence            999999999998887666433333 2222211111100      0  00    0011122 1122222222244567899


Q ss_pred             HHhhccccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          348 LLQGLLRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      ||.+||++||.+|+|+.|+|+||||..-.+
T Consensus       481 flk~~L~~dP~~R~tp~qal~Hpfl~~~~~  510 (586)
T KOG0667|consen  481 FLKRCLEWDPAERITPAQALNHPFLTGTSL  510 (586)
T ss_pred             HHHHHhccCchhcCCHHHHhcCcccccccc
Confidence            999999999999999999999999995443

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-52  Score=382.45  Aligned_cols=287  Identities=30%  Similarity=0.503  Sum_probs=239.0

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch-hh-HhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-YR-EAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~-~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      +++-..+|.+.++||.|.||.||+|+.+++++.||||.++..-. +. -.-++|+..+.++    +.|+||+++.+.+.+
T Consensus         5 ~~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kl----n~hpniikL~Evi~d   80 (538)
T KOG0661|consen    5 QVIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKL----NPHPNIIKLKEVIRD   80 (538)
T ss_pred             ehhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhc----CCCCcchhhHHHhhc
Confidence            44556789999999999999999999999999999999985322 22 2234688888888    348999999999998


Q ss_pred             cc-eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RN-HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~-~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+ .+|+|||||..+|.++++.. ++.++++.++.|+.||++||+|+|++|+.|||+||+|||+                
T Consensus        81 ~~~~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi----------------  143 (538)
T KOG0661|consen   81 NDRILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILI----------------  143 (538)
T ss_pred             cCceEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEe----------------
Confidence            87 99999999999999999887 5789999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCCCc--ccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~--~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                 .+...+||+|||+|+......+.  ++.|..|.|||++.. .-|+.+.|+||+|||++|+.+-++.|.+
T Consensus       144 -----------~~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG  212 (538)
T KOG0661|consen  144 -----------SGNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPG  212 (538)
T ss_pred             -----------cccceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCC
Confidence                       55778999999999976666543  578999999999865 4588999999999999999999999999


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .++.+....|-+++|.+..+.|...-..+..    -.+.+|.-..               ..+..+....+.++.++|.+
T Consensus       213 ~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~----mnf~~P~~~~---------------~~l~~L~p~~s~~~~~li~~  273 (538)
T KOG0661|consen  213 ASEIDQIYKICEVLGTPDKDSWPEGYNLASA----MNFRFPQVKP---------------SPLKDLLPNASSEAASLIER  273 (538)
T ss_pred             CcHHHHHHHHHHHhCCCccccchhHHHHHHH----hccCCCcCCC---------------CChHHhCcccCHHHHHHHHH
Confidence            9999999999999999988777664222211    1222222111               11222334578899999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||.+||++||||+|+|+||||+.-
T Consensus       274 ll~WDP~kRpTA~~al~~pffq~~  297 (538)
T KOG0661|consen  274 LLAWDPDKRPTASQALQHPFFQVG  297 (538)
T ss_pred             HhcCCCccCccHHHHhcCcccccc
Confidence            999999999999999999999753

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=2e-52  Score=372.36  Aligned_cols=254  Identities=27%  Similarity=0.468  Sum_probs=213.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEee--ccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce-EE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH-IC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~--~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~-~~  120 (379)
                      ..+.+..||+|..|+||++.++.|++.+|+|++.  .+......+.+|++++...     ++++||.+++.|..++. ++
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-----~spyIV~~ygaF~~~~~~is  154 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC-----QSPYIVGFYGAFYSNGEEIS  154 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC-----CCCCeeeEeEEEEeCCceEE
Confidence            4456689999999999999999999999999994  3455567788899988887     88999999999999984 99


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+|||| +|||.+++...+  .+++..+..++.++++||.|||. .+||||||||+|||+                    
T Consensus       155 I~mEYMDgGSLd~~~k~~g--~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv--------------------  212 (364)
T KOG0581|consen  155 ICMEYMDGGSLDDILKRVG--RIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV--------------------  212 (364)
T ss_pred             eehhhcCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee--------------------
Confidence            999999 999999998765  69999999999999999999995 999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCccccc-CCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC--chH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYE-RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH--ENL  275 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~--~~~  275 (379)
                             ...+.+||||||.+... +....+.+||..|||||.+.+..|+.++||||||+.++|+++|+.||...  ...
T Consensus       213 -------NskGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~  285 (364)
T KOG0581|consen  213 -------NSKGEVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYL  285 (364)
T ss_pred             -------ccCCCEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCC
Confidence                   55667888888887643 33346789999999999999999999999999999999999999999874  122


Q ss_pred             HHHHHHHHHcC-CCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          276 EHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       276 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      ..+..+..+.- ++|.                    .|+                         ..+++++++||..||+
T Consensus       286 ~~~~Ll~~Iv~~ppP~--------------------lP~-------------------------~~fS~ef~~FV~~CL~  320 (364)
T KOG0581|consen  286 DIFELLCAIVDEPPPR--------------------LPE-------------------------GEFSPEFRSFVSCCLR  320 (364)
T ss_pred             CHHHHHHHHhcCCCCC--------------------CCc-------------------------ccCCHHHHHHHHHHhc
Confidence            33333333322 2221                    111                         1388999999999999


Q ss_pred             cCCCCCcCHHHHhcCCCCCCCC
Q 017021          355 YDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +||.+|||+.|+++|||++.-+
T Consensus       321 Kdp~~R~s~~qLl~Hpfi~~~~  342 (364)
T KOG0581|consen  321 KDPSERPSAKQLLQHPFIKKFE  342 (364)
T ss_pred             CCcccCCCHHHHhcCHHHhhcc
Confidence            9999999999999999998543

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=6e-52  Score=369.19  Aligned_cols=256  Identities=29%  Similarity=0.481  Sum_probs=224.0

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      .....|++++.||+|+||.||+++.+.|++.+|+|++++.    .+.......|..++..+     .||.++.++..|++
T Consensus        22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-----~hPFiv~l~ysFQt   96 (357)
T KOG0598|consen   22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-----KHPFIVKLIYSFQT   96 (357)
T ss_pred             CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-----CCCcEeeeEEeccc
Confidence            4456788999999999999999999999999999999753    23456667899999997     88999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      +..+|+|+||+ ||.|...+++.+  .+++..++-++.+|+.||.|||+.||+||||||+|||+                
T Consensus        97 ~~kLylVld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL----------------  158 (357)
T KOG0598|consen   97 EEKLYLVLDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL----------------  158 (357)
T ss_pred             CCeEEEEEeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee----------------
Confidence            99999999999 999999999876  79999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                 +..+.++|+|||+++.....   ..+.+||+.|+|||++.+.+|+..+|+||||+++|+|++|.+||.+
T Consensus       159 -----------d~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~  227 (357)
T KOG0598|consen  159 -----------DEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA  227 (357)
T ss_pred             -----------cCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC
Confidence                       67788999999998743333   3557999999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .+.......+.+...+.++                                                ...+.++++++++
T Consensus       228 ~~~~~~~~~I~~~k~~~~p------------------------------------------------~~ls~~ardll~~  259 (357)
T KOG0598|consen  228 EDVKKMYDKILKGKLPLPP------------------------------------------------GYLSEEARDLLKK  259 (357)
T ss_pred             ccHHHHHHHHhcCcCCCCC------------------------------------------------ccCCHHHHHHHHH
Confidence            8877776666554422221                                                1256799999999


Q ss_pred             ccccCCCCCc----CHHHHhcCCCCCCCCc
Q 017021          352 LLRYDPTDRL----TAREALRHPFFTRDHL  377 (379)
Q Consensus       352 ~L~~dP~~Rp----ta~e~l~hp~f~~~~~  377 (379)
                      +|+.||++|.    ++.++-+||||.+.+.
T Consensus       260 LL~rdp~~RLg~~~d~~~ik~HpfF~~inW  289 (357)
T KOG0598|consen  260 LLKRDPRQRLGGPGDAEEIKRHPFFKGINW  289 (357)
T ss_pred             HhccCHHHhcCCCCChHHhhcCcccccCCH
Confidence            9999999996    7999999999998763

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-51  Score=379.93  Aligned_cols=272  Identities=26%  Similarity=0.393  Sum_probs=226.3

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      .....|++++.||+|+|++|++|+++.+++.||||++.+.    +........|...|.++.    +||.|++++.-|++
T Consensus        70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~----~hPgivkLy~TFQD  145 (604)
T KOG0592|consen   70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS----GHPGIVKLYFTFQD  145 (604)
T ss_pred             CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh----CCCCeEEEEEEeec
Confidence            3445678889999999999999999999999999999742    233455667888888884    78999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      +..+|+|+||+ +|+|.++|.+.+  .+.+.-++.++.+|+.||+|||+.|||||||||+|||++.++.++|.|||.+.-
T Consensus       146 ~~sLYFvLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~  223 (604)
T KOG0592|consen  146 EESLYFVLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKI  223 (604)
T ss_pred             ccceEEEEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeecccccc
Confidence            99999999999 999999999987  799999999999999999999999999999999999996655555555555544


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                      ++......    .       .+-.......+..+++||..|++||++.....++.+|+|+|||++|+|+.|.+||.+.++
T Consensus       224 l~~~~~~~----~-------~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne  292 (604)
T KOG0592|consen  224 LSPSQKSQ----E-------NPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE  292 (604)
T ss_pred             CChhhccc----c-------CccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH
Confidence            33322110    0       000000011112457999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .-+++.|......+|+                                                 ..++.++|||.++|.
T Consensus       293 yliFqkI~~l~y~fp~-------------------------------------------------~fp~~a~dLv~KLLv  323 (604)
T KOG0592|consen  293 YLIFQKIQALDYEFPE-------------------------------------------------GFPEDARDLIKKLLV  323 (604)
T ss_pred             HHHHHHHHHhcccCCC-------------------------------------------------CCCHHHHHHHHHHHc
Confidence            9999999998777764                                                 366789999999999


Q ss_pred             cCCCCCcCHHHHhcCCCCCCCCc
Q 017021          355 YDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      .||.+|+|+.|+-+||||...+.
T Consensus       324 ~dp~~Rlt~~qIk~HpFF~~Vdw  346 (604)
T KOG0592|consen  324 RDPSDRLTSQQIKAHPFFEGVDW  346 (604)
T ss_pred             cCccccccHHHHhhCcccccCCh
Confidence            99999999999999999998764

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=2.9e-51  Score=354.43  Aligned_cols=280  Identities=31%  Similarity=0.558  Sum_probs=233.1

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|+.+.++|+|+||.||+|+++.||+.||||++...   .....-+++|+..+.++     .|+|+|.+++.|.-.+..+
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqL-----kH~NLVnLiEVFrrkrklh   77 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQL-----KHENLVNLIEVFRRKRKLH   77 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhc-----ccchHHHHHHHHHhcceeE
Confidence            478889999999999999999999999999999633   23456778999999999     7899999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +|+|||..++.+-+.... ..++.+.+..+++|++.|+.|+|+++++||||||+||++                      
T Consensus        78 LVFE~~dhTvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILi----------------------  134 (396)
T KOG0593|consen   78 LVFEYCDHTVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILI----------------------  134 (396)
T ss_pred             EEeeecchHHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEE----------------------
Confidence            999999888888888865 358999999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC-C--cccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ-N--YIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~-~--~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                           ..++.+||||||+|+....+. .  -++.|..|.|||.+.+ .+|+.++||||+||++.||++|.+.|.+.++.+
T Consensus       135 -----t~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiD  209 (396)
T KOG0593|consen  135 -----TQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDID  209 (396)
T ss_pred             -----ecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHH
Confidence                 677889999999998666433 2  2578999999999987 789999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      +...|.+.+|.+++...+...+..  +...-.++.|+..               +++. .-....+..+.||+.+||+.|
T Consensus       210 QLy~I~ktLG~L~prhq~iF~~N~--~F~Gv~lP~~~~~---------------epLe-~k~p~~s~~~ld~~k~cL~~d  271 (396)
T KOG0593|consen  210 QLYLIRKTLGNLIPRHQSIFSSNP--FFHGVRLPEPEHP---------------EPLE-RKYPKISNVLLDLLKKCLKMD  271 (396)
T ss_pred             HHHHHHHHHcccCHHHHHHhccCC--ceeeeecCCCCCc---------------cchh-hhcccchHHHHHHHHHHhcCC
Confidence            999999999999887655432211  1111112222211               1111 122345668999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTR  374 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~  374 (379)
                      |++|++.+|+|.||||.+
T Consensus       272 P~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  272 PDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             ccccccHHHHhcChHHHH
Confidence            999999999999999943

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=4.6e-50  Score=341.32  Aligned_cols=278  Identities=28%  Similarity=0.477  Sum_probs=236.8

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .+|...++||+|.||.||+|++..||+.||||+++..   +.....+.+|+..++.+     +|+||+.+.+.|-..+.+
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel-----~h~nIi~LiD~F~~~~~l   76 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQEL-----KHPNIIELIDVFPHKSNL   76 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHc-----cCcchhhhhhhccCCCce
Confidence            4688899999999999999999999999999999743   33367888999999998     789999999999999999


Q ss_pred             EEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       120 ~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      .+|+||+..+|...+..+. ..++...+..++.++++||+|||+..|+|||+||.|+|+                     
T Consensus        77 ~lVfEfm~tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLi---------------------  134 (318)
T KOG0659|consen   77 SLVFEFMPTDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLI---------------------  134 (318)
T ss_pred             EEEEEeccccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEE---------------------
Confidence            9999999999999997754 468999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCCC---cccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQN---YIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~~---~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                            +.++.+||+|||+|+...+...   ..+.|.-|.|||.+.+. .|+..+|+||.|||+.||+-|.+.|.+.++.
T Consensus       135 ------s~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi  208 (318)
T KOG0659|consen  135 ------SSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI  208 (318)
T ss_pred             ------cCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH
Confidence                  5667788888888876665542   23678899999999874 5999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      ++...+.+.+|.+.++.|+.+.+..+... -...+.+.                ..    ......++++.||+.+||.+
T Consensus       209 dQL~~If~~LGTP~~~~WP~~~~lpdY~~-~~~~P~~~----------------~~----~lf~aas~d~ldLl~~m~~y  267 (318)
T KOG0659|consen  209 DQLSKIFRALGTPTPDQWPEMTSLPDYVK-IQQFPKPP----------------LN----NLFPAASSDALDLLSKMLTY  267 (318)
T ss_pred             HHHHHHHHHcCCCCcccCccccccccHHH-HhcCCCCc----------------cc----cccccccHHHHHHHHhhhcc
Confidence            99999999999999998887665443322 11121111                00    12334677889999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~  374 (379)
                      ||.+|+||.|+|+|+||+.
T Consensus       268 nP~~Rita~qaL~~~yf~~  286 (318)
T KOG0659|consen  268 NPKKRITASQALKHPYFKS  286 (318)
T ss_pred             CchhcccHHHHhcchhhhc
Confidence            9999999999999999985

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-49  Score=365.44  Aligned_cols=286  Identities=28%  Similarity=0.446  Sum_probs=237.7

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeec---cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      .......|+.+++||+|.||.||+|++..||+.||+|++..   .......+.+|+.+|+++     +|+||+++.+...
T Consensus       112 ~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l-----~HpNIikL~eivt  186 (560)
T KOG0600|consen  112 GPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRL-----DHPNIIKLEEIVT  186 (560)
T ss_pred             cccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhc-----CCCcccceeeEEE
Confidence            44556678999999999999999999999999999999973   245667788999999999     8999999999988


Q ss_pred             ec--ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          115 YR--NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       115 ~~--~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      +.  ..+|+|+|||..+|.-++...+ -.+++.++..++.||+.||+|||++||+|||||.+|||+              
T Consensus       187 ~~~~~siYlVFeYMdhDL~GLl~~p~-vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi--------------  251 (560)
T KOG0600|consen  187 SKLSGSIYLVFEYMDHDLSGLLSSPG-VKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI--------------  251 (560)
T ss_pred             ecCCceEEEEEecccchhhhhhcCCC-cccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE--------------
Confidence            76  6899999999999999987754 359999999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                                   +.++.+||+|||+|+......    ...+-|.-|.|||++.+. .|+.++|+||+|||+.||+.|++
T Consensus       252 -------------dn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkP  318 (560)
T KOG0600|consen  252 -------------DNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKP  318 (560)
T ss_pred             -------------cCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCC
Confidence                         566778888888887555443    234678999999999875 59999999999999999999999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      .|.+.++.++...|.+..|.+.++.|+. ........-..                   .......+.+.....++.+.+
T Consensus       319 I~~G~tEveQl~kIfklcGSP~e~~W~~-~kLP~~~~~kp-------------------~~~y~r~l~E~~~~~~~~~l~  378 (560)
T KOG0600|consen  319 ILQGRTEVEQLHKIFKLCGSPTEDYWPV-SKLPHATIFKP-------------------QQPYKRRLRETFKDFPASALD  378 (560)
T ss_pred             CcCCccHHHHHHHHHHHhCCCChhcccc-ccCCcccccCC-------------------CCcccchHHHHhccCCHHHHH
Confidence            9999999999999999999999988872 21110000000                   001112223335567889999


Q ss_pred             HHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          348 LLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      |+..||..||++|.||.++|+|+||+.+-
T Consensus       379 Ll~~lL~ldP~kR~tA~~aL~seyF~t~p  407 (560)
T KOG0600|consen  379 LLEKLLSLDPDKRGTASSALQSEYFTTEP  407 (560)
T ss_pred             HHHHHhccCccccccHHHHhcCcccccCC
Confidence            99999999999999999999999996553

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.1e-49  Score=368.72  Aligned_cols=282  Identities=27%  Similarity=0.407  Sum_probs=227.9

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      ++.-.|+++++||+|+||.||+|+-+.||+.+|+|++++..    .+......|..+|...     +++.+|+++..|++
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-----ds~~vVKLyYsFQD  212 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-----DSPWVVKLYYSFQD  212 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-----CCCcEEEEEEEecC
Confidence            35667889999999999999999999999999999998643    3344555677777765     78999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      ..++||||||. ||++..+|.+.+  .|++..++.++.+++.|++.+|+.|+|||||||+|+|++..|.+|+.||||+..
T Consensus       213 ~~~LYLiMEylPGGD~mTLL~~~~--~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~g  290 (550)
T KOG0605|consen  213 KEYLYLIMEYLPGGDMMTLLMRKD--TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTG  290 (550)
T ss_pred             CCeeEEEEEecCCccHHHHHHhcC--cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccch
Confidence            99999999999 999999999887  799999999999999999999999999999999999999999999999999965


Q ss_pred             CCCCCcccc------cCCCCCCeEEeecCcc--cccCCC---------------CCcccccCCccchhhhhCCCCCCccc
Q 017021          195 TPKDSSYFK------RMPKSSAIKVIDFGST--TYERPD---------------QNYIVSTRHYRAPEVILGLGWTYPCD  251 (379)
Q Consensus       195 ~~~~~~~~~------~~~~~~~~~l~Dfg~~--~~~~~~---------------~~~~~gt~~y~aPE~~~~~~~~~~sD  251 (379)
                      ..+......      ........+-.||...  ......               ..+.+|||.|+|||++.+.+|+..+|
T Consensus       291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cD  370 (550)
T KOG0605|consen  291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECD  370 (550)
T ss_pred             hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcccc
Confidence            444322210      0000011122223210  000000               02368999999999999999999999


Q ss_pred             hHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHc--CCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchh
Q 017021          252 IWSVGCILVELCTGEALFQTHENLEHLAMMERVL--GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR  329 (379)
Q Consensus       252 vwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (379)
                      +||||||+|||+.|.+||.+.++.++...|....  ...|++                                      
T Consensus       371 wWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~--------------------------------------  412 (550)
T KOG0605|consen  371 WWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEE--------------------------------------  412 (550)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc--------------------------------------
Confidence            9999999999999999999999988888777643  222221                                      


Q ss_pred             hHHHHHHhhccchhHHHHHHhhccccCCCCCc---CHHHHhcCCCCCCCC
Q 017021          330 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL---TAREALRHPFFTRDH  376 (379)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---ta~e~l~hp~f~~~~  376 (379)
                               ...+.+++|||.+||. ||++|.   +++||-+||||++.+
T Consensus       413 ---------~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~  452 (550)
T KOG0605|consen  413 ---------VDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD  452 (550)
T ss_pred             ---------CcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence                     2356899999999999 999999   499999999999875

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-49  Score=354.80  Aligned_cols=262  Identities=28%  Similarity=0.484  Sum_probs=223.1

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ..|.+.++||+|+||+||+|+++.++..||||.+...   .+..+....|+.++..+     .|+||+.++++.+.++++
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel-----~H~nIV~l~d~~~~~~~i   84 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKEL-----KHPNIVRLLDCIEDDDFI   84 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhc-----CCcceeeEEEEEecCCeE
Confidence            4567778899999999999999999999999999643   44566778899999999     689999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||| ||+|.+++.+++  .+++..++.++.||+.||++||+.+||||||||+|||+.....               
T Consensus        85 ~lVMEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~---------------  147 (429)
T KOG0595|consen   85 YLVMEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTAR---------------  147 (429)
T ss_pred             EEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCC---------------
Confidence            9999999 999999999986  7999999999999999999999999999999999999965310               


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            .+....+||+|||+|+...+..  .+.+|++.|||||++..+.|+.|+|+||+|+++|++++|+.||...+..|
T Consensus       148 ------~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~e  221 (429)
T KOG0595|consen  148 ------NDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKE  221 (429)
T ss_pred             ------CCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHH
Confidence                  0112679999999999777654  55799999999999999999999999999999999999999999988888


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      .+..+++...-.|.                                              .....++...+++...|+.|
T Consensus       222 L~~~~~k~~~~~~~----------------------------------------------~~~~~s~~~~~Ll~~ll~~~  255 (429)
T KOG0595|consen  222 LLLYIKKGNEIVPV----------------------------------------------LPAELSNPLRELLISLLQRN  255 (429)
T ss_pred             HHHHHhccccccCc----------------------------------------------hhhhccCchhhhhhHHHhcC
Confidence            87755553322211                                              01134566778999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCCCcC
Q 017021          357 PTDRLTAREALRHPFFTRDHLR  378 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~~~~  378 (379)
                      |.+|.+..+-+.|++...+..+
T Consensus       256 ~~~~~~~~~~~~~~~l~~~p~~  277 (429)
T KOG0595|consen  256 PKDRISFEDFFDHPFLAANPQD  277 (429)
T ss_pred             ccccCchHHhhhhhhcccCccc
Confidence            9999999999999998876543

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=3.4e-49  Score=345.78  Aligned_cols=281  Identities=27%  Similarity=0.435  Sum_probs=235.3

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeec---cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee--c
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--R  116 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~--~  116 (379)
                      ...|+.+.+|++|.||.||+|+|+.|++.||+|+++-   .........+|+.++.++     +|+|||.+.+...-  -
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~-----~H~NIV~vkEVVvG~~~  149 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKA-----RHPNIVEVKEVVVGSNM  149 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhc-----CCCCeeeeEEEEecccc
Confidence            4568899999999999999999999999999999973   244567778999999998     78999999888763  3


Q ss_pred             ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          117 NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       117 ~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      +.+|+|||||..+|..+++... .++...++..++.|++.||+|||...|+||||||+|+|+                  
T Consensus       150 d~iy~VMe~~EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm------------------  210 (419)
T KOG0663|consen  150 DKIYIVMEYVEHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL------------------  210 (419)
T ss_pred             ceeeeeHHHHHhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee------------------
Confidence            5699999999999999999876 479999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCC-CCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                               ...+.+||+|||+|+..+.+.   ...+-|.-|.|||++.+.+ |+.+.|+||+|||+.|++++++.|.+.
T Consensus       211 ---------~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~  281 (419)
T KOG0663|consen  211 ---------SHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGK  281 (419)
T ss_pred             ---------ccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCC
Confidence                     556678888999988766653   3356799999999998754 899999999999999999999999999


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhh-hhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc--chhHHHHHH
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEK-YVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH--SAGDLTHLL  349 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li  349 (379)
                      ++.++..+|.+.+|.+.+..|+-+...... .+..     +.               ...+....-...  .+....+|+
T Consensus       282 sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f-----~~---------------~pyn~lr~kF~~~~lse~g~~Ll  341 (419)
T KOG0663|consen  282 SEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTF-----SE---------------HPYNNLRKKFGALSLSEQGFDLL  341 (419)
T ss_pred             chHHHHHHHHHHhCCCccccCCCccccchhhcccc-----CC---------------CCchhhhhhccccccchhHHHHH
Confidence            999999999999999999988875544322 1111     11               111111111112  457899999


Q ss_pred             hhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          350 QGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +.+|.+||.+|.||+|.|+|.||.+.
T Consensus       342 n~llt~dP~kR~tA~~~L~h~~F~e~  367 (419)
T KOG0663|consen  342 NKLLTYDPGKRITAEDGLKHEYFRET  367 (419)
T ss_pred             HHHhccCccccccHHHhhcccccccC
Confidence            99999999999999999999999984

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4e-49  Score=349.89  Aligned_cols=277  Identities=29%  Similarity=0.507  Sum_probs=233.0

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeec---cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee-----c
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-----R  116 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~-----~  116 (379)
                      |...+.||.|+||.|+.|.++.||+.||||++..   +.....+..+|+..+..+     .|+||+.+.+.+..     -
T Consensus        24 y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~-----~HeNIi~l~di~~p~~~~~f   98 (359)
T KOG0660|consen   24 YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHL-----RHENIIGLLDIFRPPSRDKF   98 (359)
T ss_pred             ecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHh-----cCCCcceEEeeccccccccc
Confidence            3446999999999999999999999999999872   344567778899998888     67899999988875     3


Q ss_pred             ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          117 NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       117 ~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      +-+|+|+|+|+.+|.++++++.  .++...+..+++||+.||.|+|+.+++||||||.|+++                  
T Consensus        99 ~DvYiV~elMetDL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~------------------  158 (359)
T KOG0660|consen   99 NDVYLVFELMETDLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL------------------  158 (359)
T ss_pred             ceeEEehhHHhhHHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcccccccccchhheee------------------
Confidence            4699999999999999998875  59999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhh-CCCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                               +.++.+||||||+|+.....     ....+.|..|.|||++. ...|+.+.||||+|||+.||++|++.|.
T Consensus       159 ---------n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFp  229 (359)
T KOG0660|consen  159 ---------NADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFP  229 (359)
T ss_pred             ---------ccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCC
Confidence                     67778899999999876432     23457899999999875 4679999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhh-hhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVD-RHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      +.+..++...+.+..|.++++.+..+. +.++.++.+- ...|.                  ..........++.+.||+
T Consensus       230 G~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~sl-p~~p~------------------~~f~~~fp~a~p~AidLl  290 (359)
T KOG0660|consen  230 GKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSL-PQIPK------------------QPFSSIFPNANPLAIDLL  290 (359)
T ss_pred             CCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhC-CCCCC------------------CCHHHHcCCCCHHHHHHH
Confidence            999999999999999999999888865 4445555431 11111                  011223346788999999


Q ss_pred             hhccccCCCCCcCHHHHhcCCCCCC
Q 017021          350 QGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      .+||+.||.+|+||+|+|+|||++.
T Consensus       291 ekmL~fdP~kRita~eAL~hPYl~~  315 (359)
T KOG0660|consen  291 EKMLVFDPKKRITAEEALAHPYLAP  315 (359)
T ss_pred             HHHhccCccccCCHHHHhcChhhhh
Confidence            9999999999999999999999974

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-49  Score=340.56  Aligned_cols=254  Identities=26%  Similarity=0.422  Sum_probs=227.1

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      ..-..|++.+.||.|+||.|.+++.+.+|..+|+|+++..+    ++.+....|..+++.+     .||+++++.+.+.+
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-----~~PFlv~l~~t~~d  115 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-----SHPFLVKLYGTFKD  115 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-----cCceeEEEEEeecc
Confidence            45567788899999999999999999999999999998532    3456667789999888     78999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+++|+||||. ||.|..++.+.+  ++++..++.++.||+.||+|||+.+|++||+||+|||+                
T Consensus       116 ~~~lymvmeyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl----------------  177 (355)
T KOG0616|consen  116 NSNLYMVMEYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL----------------  177 (355)
T ss_pred             CCeEEEEEeccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee----------------
Confidence            99999999999 999999998876  79999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                                 ++++.+||+|||+|+......-+.+|||.|+|||++...++..++|.||||+++|||+.|.+||...+.
T Consensus       178 -----------D~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~  246 (355)
T KOG0616|consen  178 -----------DQNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP  246 (355)
T ss_pred             -----------ccCCcEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence                       778889999999999887777778999999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      ..+.+.|.+.--.+|.                                                 ..+++++|||.++|+
T Consensus       247 ~~iY~KI~~~~v~fP~-------------------------------------------------~fs~~~kdLl~~LL~  277 (355)
T KOG0616|consen  247 IQIYEKILEGKVKFPS-------------------------------------------------YFSSDAKDLLKKLLQ  277 (355)
T ss_pred             HHHHHHHHhCcccCCc-------------------------------------------------ccCHHHHHHHHHHHh
Confidence            7777666554333332                                                 467899999999999


Q ss_pred             cCCCCCc-----CHHHHhcCCCCCCCC
Q 017021          355 YDPTDRL-----TAREALRHPFFTRDH  376 (379)
Q Consensus       355 ~dP~~Rp-----ta~e~l~hp~f~~~~  376 (379)
                      .|-.+|.     ...++..||||++..
T Consensus       278 vD~t~R~gnlknG~~dIk~H~wF~~v~  304 (355)
T KOG0616|consen  278 VDLTKRFGNLKNGVEDIKNHPWFKGVD  304 (355)
T ss_pred             hhhHhhhcCcCCCccccccCccccccc
Confidence            9999994     688999999999764

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-50  Score=337.75  Aligned_cols=259  Identities=25%  Similarity=0.400  Sum_probs=220.0

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ...|++.+.||+|+|+.|+++.++.||+.+|+|+++..   ...-+...+|+.+.+.+     .||||+++++.+.+..+
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~L-----qHP~IvrL~~ti~~~~~   84 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-----QHPNIVRLHDSIQEESF   84 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhc-----CCCcEeehhhhhcccce
Confidence            34689999999999999999999999999999999732   12234455667776666     88999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .|+|+|++ |++|..-+-+.-  -.++..+..++.||+.||+|+|..||+|||+||.|+++-+                 
T Consensus        85 ~ylvFe~m~G~dl~~eIV~R~--~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLAS-----------------  145 (355)
T KOG0033|consen   85 HYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLAS-----------------  145 (355)
T ss_pred             eEEEEecccchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeee-----------------
Confidence            99999999 888876554432  4788899999999999999999999999999999999943                 


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                             .++...+||+|||.|...+...  ....|||.|+|||++...+|+.++|||+.||++|-|+.|.+||.+.+..
T Consensus       146 -------K~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~  218 (355)
T KOG0033|consen  146 -------KAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH  218 (355)
T ss_pred             -------ccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH
Confidence                   2677889999999998766443  3468999999999999999999999999999999999999999987777


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      ...++|.+.....|+                                             ..|++.++++++||++||..
T Consensus       219 rlye~I~~g~yd~~~---------------------------------------------~~w~~is~~Ak~LvrrML~~  253 (355)
T KOG0033|consen  219 RLYEQIKAGAYDYPS---------------------------------------------PEWDTVTPEAKSLIRRMLTV  253 (355)
T ss_pred             HHHHHHhccccCCCC---------------------------------------------cccCcCCHHHHHHHHHHhcc
Confidence            777777665433332                                             13567889999999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ||.+|+||.|+|+|||+.+.+
T Consensus       254 dP~kRIta~EAL~HpWi~~r~  274 (355)
T KOG0033|consen  254 NPKKRITADEALKHPWICNRE  274 (355)
T ss_pred             ChhhhccHHHHhCCchhcchH
Confidence            999999999999999998764

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-48  Score=362.75  Aligned_cols=252  Identities=30%  Similarity=0.477  Sum_probs=214.8

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----c--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----K--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      ..-.|++.+.||+|+||+|+.|++..+++.||+|+++..    .  .......+|+.++..+.    +||||+++++++.
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~----~HpnI~~l~ev~~   90 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLR----SHPNIIRLLEVFA   90 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhc----cCCCEeEEEEEEe
Confidence            345789999999999999999999999999999987643    1  23444557888888882    3789999999999


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      ....+|+||||+ ||+|.+.+...+  .+.+..+..++.|++.|++|||+.||+||||||+||++               
T Consensus        91 t~~~~~ivmEy~~gGdL~~~i~~~g--~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENill---------------  153 (370)
T KOG0583|consen   91 TPTKIYIVMEYCSGGDLFDYIVNKG--RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILL---------------  153 (370)
T ss_pred             cCCeEEEEEEecCCccHHHHHHHcC--CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEe---------------
Confidence            999999999999 899999998854  79999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCC-CCeEEeecCcccccC---CCCCcccccCCccchhhhhCCC-CC-CccchHhHHHHHHHHHhCCC
Q 017021          194 HTPKDSSYFKRMPKS-SAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVILGLG-WT-YPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~-~~~~l~Dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDvwSlG~il~~l~~g~~  267 (379)
                                  +.+ +.+||+|||++....   ....+.+||+.|+|||++.+.. |+ .++||||+|+++|.|++|..
T Consensus       154 ------------d~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~  221 (370)
T KOG0583|consen  154 ------------DGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRL  221 (370)
T ss_pred             ------------cCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCC
Confidence                        555 789999999988662   2336679999999999999988 86 89999999999999999999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccc-hhHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS-AGDLT  346 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  346 (379)
                      ||...+...+...+.+..-..|                       .                          .. +.+++
T Consensus       222 PF~d~~~~~l~~ki~~~~~~~p-----------------------~--------------------------~~~S~~~~  252 (370)
T KOG0583|consen  222 PFDDSNVPNLYRKIRKGEFKIP-----------------------S--------------------------YLLSPEAR  252 (370)
T ss_pred             CCCCccHHHHHHHHhcCCccCC-----------------------C--------------------------CcCCHHHH
Confidence            9998665555544333322222                       2                          23 78999


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      +|+.+||+.||.+|+|+.++++||||+.
T Consensus       253 ~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  253 SLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            9999999999999999999999999996

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2e-49  Score=339.81  Aligned_cols=243  Identities=29%  Similarity=0.437  Sum_probs=210.9

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeec---cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecc-eeeec
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN-WFDYR  116 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~-~~~~~  116 (379)
                      .-..|+|+++||.|.||+||++.+..+|..||+|.++-   +.+.++....|+.++.++     +||||+++++ .|..+
T Consensus        17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL-----~HpNIVqYy~~~f~~~   91 (375)
T KOG0591|consen   17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQL-----NHPNIVQYYAHSFIED   91 (375)
T ss_pred             cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhc-----CCchHHHHHHHhhhcc
Confidence            44569999999999999999999999999999999973   345667788899999999     8899999988 55555


Q ss_pred             c-eEEEEEeCC-CCCHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHH--cC--CcccCCCCCcEEEecccccccCC
Q 017021          117 N-HICIVFEKL-GSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHD--LC--MIHTDLKPENVLLVSSEYIKVPD  188 (379)
Q Consensus       117 ~-~~~lv~e~~-~~sL~~~l~~--~~~~~l~~~~~~~~~~qi~~aL~~LH~--~~--iiH~dlkp~Nili~~~~~~~~~~  188 (379)
                      + .++||||+| +|+|.++++.  +..+.+++..++.++.|++.||.++|+  ..  |+||||||.||++          
T Consensus        92 ~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl----------  161 (375)
T KOG0591|consen   92 NEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL----------  161 (375)
T ss_pred             chhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE----------
Confidence            4 499999999 9999999964  344679999999999999999999998  44  9999999999999          


Q ss_pred             CccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhC
Q 017021          189 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG  265 (379)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g  265 (379)
                                       +.++.+||.|||+++......   .+.+|||.||+||.+.+.+|+++|||||+||++|||+.-
T Consensus       162 -----------------~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL  224 (375)
T KOG0591|consen  162 -----------------TANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCAL  224 (375)
T ss_pred             -----------------cCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhc
Confidence                             666778888888887655543   356899999999999999999999999999999999999


Q ss_pred             CCCCCCCchHHHHHHHHHHc-CCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          266 EALFQTHENLEHLAMMERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       266 ~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      ++||.+.+-.+....|.+.. .+.|++                                                ++|.+
T Consensus       225 ~~PF~g~n~~~L~~KI~qgd~~~~p~~------------------------------------------------~YS~~  256 (375)
T KOG0591|consen  225 QSPFYGDNLLSLCKKIEQGDYPPLPDE------------------------------------------------HYSTD  256 (375)
T ss_pred             CCCcccccHHHHHHHHHcCCCCCCcHH------------------------------------------------HhhhH
Confidence            99999998888888887753 334433                                                57889


Q ss_pred             HHHHHhhccccCCCCCcCH
Q 017021          345 LTHLLQGLLRYDPTDRLTA  363 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta  363 (379)
                      +..+|..|+..||+.||+.
T Consensus       257 l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  257 LRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             HHHHHHHHccCCcccCCCc
Confidence            9999999999999999985

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=7.8e-48  Score=346.09  Aligned_cols=289  Identities=26%  Similarity=0.353  Sum_probs=234.1

Q ss_pred             eeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           36 TYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        36 ~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      +...+.-..+++++.||.|.-|+||+|+.+.++..+|+|++.+.    .+...++..|.+||+.+     +||.++.++.
T Consensus        70 ~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-----DHPFlPTLYa  144 (459)
T KOG0610|consen   70 KDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-----DHPFLPTLYA  144 (459)
T ss_pred             CCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-----CCCccchhhh
Confidence            34455666789999999999999999999999999999999743    23345566688888888     8999999999


Q ss_pred             eeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCc
Q 017021          112 WFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                      .|+.+++.|+||||| ||+|..+.+++.++.+++..++.++.+++.||+|||-.|||.|||||+|||+.++|.+-+.||.
T Consensus       145 ~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFD  224 (459)
T KOG0610|consen  145 SFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFD  224 (459)
T ss_pred             eeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeecc
Confidence            999999999999999 9999999999998999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCccccc-----CCCCCCeE---E----------------eecCc--------ccccCCCCCcccccCCccch
Q 017021          191 SSLHTPKDSSYFKR-----MPKSSAIK---V----------------IDFGS--------TTYERPDQNYIVSTRHYRAP  238 (379)
Q Consensus       191 ~~~~~~~~~~~~~~-----~~~~~~~~---l----------------~Dfg~--------~~~~~~~~~~~~gt~~y~aP  238 (379)
                      |++.......-...     ......+.   .                .|.+.        |...+..+.+++||-+|+||
T Consensus       225 LS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAP  304 (459)
T KOG0610|consen  225 LSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAP  304 (459)
T ss_pred             ccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccc
Confidence            98654221110000     00000000   0                11111        11222334668999999999


Q ss_pred             hhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCch
Q 017021          239 EVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASR  318 (379)
Q Consensus       239 E~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (379)
                      |++.+...+.++|+|+||+++|||+.|..||.+.+..+++..+......+|+.                           
T Consensus       305 EvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~---------------------------  357 (459)
T KOG0610|consen  305 EVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEE---------------------------  357 (459)
T ss_pred             eeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCC---------------------------
Confidence            99999999999999999999999999999999998888776554433333321                           


Q ss_pred             hhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcC----HHHHhcCCCCCCCC
Q 017021          319 ESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT----AREALRHPFFTRDH  376 (379)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----a~e~l~hp~f~~~~  376 (379)
                                          ...+..++|||+++|.+||.+|..    |+||-+||||+..+
T Consensus       358 --------------------~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVn  399 (459)
T KOG0610|consen  358 --------------------PEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVN  399 (459)
T ss_pred             --------------------CcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCC
Confidence                                136689999999999999999998    99999999999865

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.8e-48  Score=367.62  Aligned_cols=247  Identities=30%  Similarity=0.550  Sum_probs=217.8

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      |++.+.||.|+-|.|-+|++.+||+++|||++...    ......+.+|+.+|.-+     .|||++++++.++...++|
T Consensus        14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi-----~HpnVl~LydVwe~~~~ly   88 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI-----EHPNVLRLYDVWENKQHLY   88 (786)
T ss_pred             eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh-----cCCCeeeeeeeeccCceEE
Confidence            78999999999999999999999999999999743    34566777899999988     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +|.||+ ||.|.+++-.++  .+++.++.+++.||+.|+.|+|..+|+|||+||+|+|+                     
T Consensus        89 lvlEyv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLL---------------------  145 (786)
T KOG0588|consen   89 LVLEYVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLL---------------------  145 (786)
T ss_pred             EEEEecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhh---------------------
Confidence            999999 999999999887  79999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCC-CccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWT-YPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            +....+||+|||+|....+.+  .+.||+++|.|||++.+.+|. .++||||+|||+|.|++|+.||+..+-..
T Consensus       146 ------d~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~  219 (786)
T KOG0588|consen  146 ------DVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRV  219 (786)
T ss_pred             ------hcccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHH
Confidence                  455559999999998655554  457999999999999999986 99999999999999999999999766555


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+++                       |.+.+|.                          ..++++.+||++||..|
T Consensus       220 LLlKV~~-----------------------G~f~MPs--------------------------~Is~eaQdLLr~ml~VD  250 (786)
T KOG0588|consen  220 LLLKVQR-----------------------GVFEMPS--------------------------NISSEAQDLLRRMLDVD  250 (786)
T ss_pred             HHHHHHc-----------------------CcccCCC--------------------------cCCHHHHHHHHHHhccC
Confidence            5544443                       3333332                          47889999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTR  374 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~  374 (379)
                      |++|+|.+|+++|||+..
T Consensus       251 p~~RiT~~eI~kHP~l~g  268 (786)
T KOG0588|consen  251 PSTRITTEEILKHPFLSG  268 (786)
T ss_pred             ccccccHHHHhhCchhhc
Confidence            999999999999999864

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=2.9e-47  Score=338.91  Aligned_cols=285  Identities=31%  Similarity=0.506  Sum_probs=235.0

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch---hhHhHHHHHHHHHHHHhcCCCCCe-eEEecceeeecc
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---YREAAMIEIEVLQQLAKHDKGGNR-CVQIRNWFDYRN  117 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~-i~~~~~~~~~~~  117 (379)
                      -..|..+++||+|+||+||+|+++.+|+.||+|++.....   ......+|+.++..+     .|.| ++.+++++.+.+
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L-----~~~~~iv~L~dv~~~~~   84 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRL-----SHANHIVRLHDVIHTSN   84 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHh-----CCCcceEEEEeeeeecc
Confidence            4568888999999999999999999999999999975433   566778999999999     4555 999999998876


Q ss_pred             ------eEEEEEeCCCCCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCC
Q 017021          118 ------HICIVFEKLGSSLYDFLRKNNY--RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       118 ------~~~lv~e~~~~sL~~~l~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                            ..++|+||...+|..+++....  ..++...+..++.||+.||+|||+++|+||||||+||++           
T Consensus        85 ~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi-----------  153 (323)
T KOG0594|consen   85 NHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLI-----------  153 (323)
T ss_pred             cccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEE-----------
Confidence                  8999999999999999988652  257788999999999999999999999999999999999           


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhC
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTG  265 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g  265 (379)
                                      +..+.+||+|||+|+...-+.   ...++|..|.|||++.+. .|+...||||+|||++||+++
T Consensus       154 ----------------~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~  217 (323)
T KOG0594|consen  154 ----------------SSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTR  217 (323)
T ss_pred             ----------------CCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhC
Confidence                            566778888888887555333   234688999999999886 689999999999999999999


Q ss_pred             CCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          266 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       266 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                      +..|.+.++.++...|.+.+|.+.+..|+.+....+.-..  ...++...                 ......+....+.
T Consensus       218 ~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~--f~~~~~~~-----------------~l~~~~~~~~~~~  278 (323)
T KOG0594|consen  218 RPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAP--FPKWPGPK-----------------DLSSILPKLDPDG  278 (323)
T ss_pred             CCCCCCCcHHHHHHHHHHHcCCCCccCCCCcccccccccc--CcCCCCcc-----------------chHHhccccCccH
Confidence            9999999999999999999999999888876654433321  11111100                 0111112233689


Q ss_pred             HHHHhhccccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          346 THLLQGLLRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      .+++.+||+.+|.+|.||+.+|.||||.+...
T Consensus       279 ~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~  310 (323)
T KOG0594|consen  279 IELLSKLLQYDPAKRISAKGALTHPYFSELPE  310 (323)
T ss_pred             HHHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence            99999999999999999999999999998754

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-48  Score=360.19  Aligned_cols=257  Identities=27%  Similarity=0.393  Sum_probs=220.6

Q ss_pred             eeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           37 YIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        37 ~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      ........|.-.++||+|+.|.||.|....+++.||+|++.... ..++-...|+.++...     +|+|+|.+++.|-.
T Consensus       267 ~~~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~-----~H~NiVnfl~Sylv  341 (550)
T KOG0578|consen  267 SQGDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDL-----HHPNIVNFLDSYLV  341 (550)
T ss_pred             cCCChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhc-----cchHHHHHHHHhcc
Confidence            34556677888899999999999999999999999999997433 3355667899998887     88999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+.+|+||||+ ||+|.+++....   +++.++..++.++++||+|||.+||+|||||.+|||+                
T Consensus       342 ~deLWVVMEym~ggsLTDvVt~~~---~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL----------------  402 (550)
T KOG0578|consen  342 GDELWVVMEYMEGGSLTDVVTKTR---MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILL----------------  402 (550)
T ss_pred             cceeEEEEeecCCCchhhhhhccc---ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEe----------------
Confidence            99999999999 999999998754   9999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                 ..++.+||+|||+|.......   .+.+||+.|||||+.....|++++||||||+++.||+.|.+||-.
T Consensus       403 -----------~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln  471 (550)
T KOG0578|consen  403 -----------TMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN  471 (550)
T ss_pred             -----------ccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC
Confidence                       566779999999987554443   567899999999999999999999999999999999999999987


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .++....+.|...-.+                      ...                        ..+..++.++||+.+
T Consensus       472 E~PlrAlyLIa~ng~P----------------------~lk------------------------~~~klS~~~kdFL~~  505 (550)
T KOG0578|consen  472 ENPLRALYLIATNGTP----------------------KLK------------------------NPEKLSPELKDFLDR  505 (550)
T ss_pred             CChHHHHHHHhhcCCC----------------------CcC------------------------CccccCHHHHHHHHH
Confidence            7766555544432211                      111                        124678999999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      ||+.||.+|++|.|+|+||||+-
T Consensus       506 cL~~dv~~RasA~eLL~HpFl~~  528 (550)
T KOG0578|consen  506 CLVVDVEQRASAKELLEHPFLKM  528 (550)
T ss_pred             HhhcchhcCCCHHHHhcChhhhh
Confidence            99999999999999999999953

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=7.5e-47  Score=347.49  Aligned_cols=277  Identities=29%  Similarity=0.489  Sum_probs=220.1

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .|++.++||.|+||.||+|+++.+++.||+|+++...  .......+|+.++..+     .|+|++++++++..++..++
T Consensus         6 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~l   80 (288)
T cd07871           6 TYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNL-----KHANIVTLHDIIHTERCLTL   80 (288)
T ss_pred             cceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhC-----CCCCEeeEEEEEcCCCeEEE
Confidence            4888899999999999999999999999999986432  2234566799998888     78999999999999999999


Q ss_pred             EEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          122 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      ||||+.++|.+++.... ..++...+..++.||+.||+|||++||+||||||+||+++                      
T Consensus        81 v~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~----------------------  137 (288)
T cd07871          81 VFEYLDSDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLIN----------------------  137 (288)
T ss_pred             EEeCCCcCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC----------------------
Confidence            99999779999987654 3578999999999999999999999999999999999994                      


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                           .++.++|+|||.+.......   ....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus       138 -----~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~  212 (288)
T cd07871         138 -----EKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE  212 (288)
T ss_pred             -----CCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                 44567777777765432211   23467899999999865 5688999999999999999999999998888888


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.+..+.++...|+.+....... .   ...+..              .... ........+.++.+||.+||++||
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~--------------~~~~-~~~~~~~~~~~~~dll~~mL~~dp  273 (288)
T cd07871         213 LHLIFRLLGTPTEETWPGITSNEEFR-S---YLFPQY--------------RAQP-LINHAPRLDTDGIDLLSSLLLYET  273 (288)
T ss_pred             HHHHHHHhCCCChHHhhccccchhhh-c---cccCcc--------------CCCc-hHHhCCCCCHHHHHHHHHhcCcCc
Confidence            88888888888888776543321110 0   000000              0000 011123456789999999999999


Q ss_pred             CCCcCHHHHhcCCCC
Q 017021          358 TDRLTAREALRHPFF  372 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f  372 (379)
                      .+||||+|+++||||
T Consensus       274 ~~R~t~~~~l~hp~f  288 (288)
T cd07871         274 KSRISAEAALRHSYF  288 (288)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-47  Score=345.66  Aligned_cols=279  Identities=24%  Similarity=0.339  Sum_probs=223.7

Q ss_pred             eeeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           35 ITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        35 ~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      ...++.....|++.+.||.|.-++||+|+..-+++.||||+++....  .-....+|++.+..+     +||||+.++..
T Consensus        18 ~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~-----~HPNIv~~~~s   92 (516)
T KOG0582|consen   18 EKEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLI-----DHPNIVTYHCS   92 (516)
T ss_pred             cccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhc-----CCCCcceEEEE
Confidence            44567778889999999999999999999999999999999974322  235677888888887     89999999999


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                      |..+..+|+||+|| +||+.+++.......+.+..+..++.+++.||.|||.+|.||||||+.|||++.+|.+|++|||.
T Consensus        93 Fvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgv  172 (516)
T KOG0582|consen   93 FVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGV  172 (516)
T ss_pred             EEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCcee
Confidence            99999999999999 99999999987666799999999999999999999999999999999999998887777777776


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC--CCCCCccchHhHHHHHHHHHhCCCCC
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                      +.++..+.          .-...+|          .+.+||++|+|||++..  ..|++|+||||||++..||++|+.||
T Consensus       173 sa~l~~~G----------~R~~~rf----------~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf  232 (516)
T KOG0582|consen  173 SASLFDSG----------DRQVTRF----------NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPF  232 (516)
T ss_pred             eeeecccC----------ceeeEee----------ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCc
Confidence            64432211          0111111          35689999999999643  46999999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      ....+...+  +.+.-+.+|.....                                     ....+..+.++..++++|
T Consensus       233 ~k~pPmkvL--l~tLqn~pp~~~t~-------------------------------------~~~~d~~k~~~ksf~e~i  273 (516)
T KOG0582|consen  233 SKYPPMKVL--LLTLQNDPPTLLTS-------------------------------------GLDKDEDKKFSKSFREMI  273 (516)
T ss_pred             ccCChHHHH--HHHhcCCCCCcccc-------------------------------------cCChHHhhhhcHHHHHHH
Confidence            876665544  33344444421100                                     000112234667999999


Q ss_pred             hhccccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          350 QGLLRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      ..||+.||.+||||+++|+|+||+....
T Consensus       274 ~~CL~kDP~kRptAskLlkh~FFk~~k~  301 (516)
T KOG0582|consen  274 ALCLVKDPSKRPTASKLLKHAFFKKAKS  301 (516)
T ss_pred             HHHhhcCcccCCCHHHHhccHHHhhccc
Confidence            9999999999999999999999997654

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=2.3e-46  Score=366.61  Aligned_cols=312  Identities=39%  Similarity=0.690  Sum_probs=233.0

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCC-CCCeeEEecceeeec-ce
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK-GGNRCVQIRNWFDYR-NH  118 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~-~~~~i~~~~~~~~~~-~~  118 (379)
                      ....|++.++||+|+||+||+|++..+++.||||+++...........|+.++..+.+... ++.+++.+.+++..+ .+
T Consensus       127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~  206 (467)
T PTZ00284        127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH  206 (467)
T ss_pred             CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence            3457999999999999999999999999999999997544445556678888888765432 345688888888754 58


Q ss_pred             EEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .|+||++++++|.+++.+.+  .+++..+..++.||+.||.|||+ .||+||||||+|||++..+.......  ..    
T Consensus       207 ~~iv~~~~g~~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~--~~----  278 (467)
T PTZ00284        207 MCIVMPKYGPCLLDWIMKHG--PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVT--NR----  278 (467)
T ss_pred             EEEEEeccCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccc--cc----
Confidence            99999999999999987764  68999999999999999999998 59999999999999976543211110  00    


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                           ........+||+|||.+...........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus       279 -----~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~  353 (467)
T PTZ00284        279 -----ALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEH  353 (467)
T ss_pred             -----ccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence                 001234569999999887655555567899999999999999999999999999999999999999999888888


Q ss_pred             HHHHHHHcCCCChhHHHhhhh-hhhhhhcc-CCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          278 LAMMERVLGPLPQHMLKRVDR-HAEKYVRR-GRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      ...+.+..+.+|..+...... ..+.+... +.+. +.  .....+...........      ....+.+.|||.+||++
T Consensus       354 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~------~~~~~~~~dli~~mL~~  424 (467)
T PTZ00284        354 LHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLR-PC--TDPKHLARIARARPVRE------VIRDDLLCDLIYGLLHY  424 (467)
T ss_pred             HHHHHHHcCCCCHHHHhhccchhHHHHhhhccccc-cc--CCHHHHHhhhcccchhh------hhchHHHHHHHHHhCCc
Confidence            888999999999887664321 11111111 1110 00  00000100000000000      11246789999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~  374 (379)
                      ||.+||||+|+|+||||..
T Consensus       425 dP~~R~ta~e~L~Hp~~~~  443 (467)
T PTZ00284        425 DRQKRLNARQMTTHPYVLK  443 (467)
T ss_pred             ChhhCCCHHHHhcCccccc
Confidence            9999999999999999986

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=1e-47  Score=356.38  Aligned_cols=249  Identities=29%  Similarity=0.492  Sum_probs=217.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      +|-+.+.||+|.||.||+|+.+.|.+.||+|.+.+..   +.-....+|++++..+     .|+||+.++++|+...++|
T Consensus         3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~l-----kHpniv~m~esfEt~~~~~   77 (808)
T KOG0597|consen    3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSL-----KHPNIVEMLESFETSAHLW   77 (808)
T ss_pred             chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhc-----CCcchhhHHHhhcccceEE
Confidence            5778899999999999999999999999999997533   3345577899999998     7899999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +|+|||.|+|..++...+  .++++.+..++.+++.||.|||+.+|+|||+||+||++                      
T Consensus        78 vVte~a~g~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl----------------------  133 (808)
T KOG0597|consen   78 VVTEYAVGDLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL----------------------  133 (808)
T ss_pred             EEehhhhhhHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee----------------------
Confidence            999999669999998866  79999999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                           .+++.+|+||||+|+......   ....|||.|||||+..+.+|+..+|+|||||++||+.+|++||...+-.+.
T Consensus       134 -----~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~L  208 (808)
T KOG0597|consen  134 -----EKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQL  208 (808)
T ss_pred             -----cCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence                 788899999999998776654   346799999999999999999999999999999999999999986554444


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...|......+|                                                 .+.+..+.+|++.+|.+||
T Consensus       209 v~~I~~d~v~~p-------------------------------------------------~~~S~~f~nfl~gLL~kdP  239 (808)
T KOG0597|consen  209 VKSILKDPVKPP-------------------------------------------------STASSSFVNFLQGLLIKDP  239 (808)
T ss_pred             HHHHhcCCCCCc-------------------------------------------------ccccHHHHHHHHHHhhcCh
Confidence            444433222222                                                 1357789999999999999


Q ss_pred             CCCcCHHHHhcCCCCCCC
Q 017021          358 TDRLTAREALRHPFFTRD  375 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f~~~  375 (379)
                      .+|.|..+++.|||.+..
T Consensus       240 ~~RltW~~Ll~HpF~k~~  257 (808)
T KOG0597|consen  240 AQRLTWTDLLGHPFWKGK  257 (808)
T ss_pred             hhcccHHHHhcChHHhhh
Confidence            999999999999998753

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-46  Score=345.61  Aligned_cols=249  Identities=25%  Similarity=0.351  Sum_probs=209.7

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|+||.||+|.++.+++.||+|++....    .....+.+|+.++..+     .|+|++++++.+.+....
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~   76 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-----SHPFIIRLFWTEHDQRFL   76 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-----CCCcHhhhHhhhccCCeE
Confidence            4788899999999999999999999999999997432    2334566788888887     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++....  .+++..+..++.|++.||+|||+.|++||||||+||++                    
T Consensus        77 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli--------------------  134 (291)
T cd05612          77 YMLMEYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL--------------------  134 (291)
T ss_pred             EEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE--------------------
Confidence            9999999 899999998764  68999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  278 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~  278 (379)
                             +.++.++|+|||.+...........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+..
T Consensus       135 -------~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~  207 (291)
T cd05612         135 -------DKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIY  207 (291)
T ss_pred             -------CCCCCEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                   4556788888888876554444567999999999999988999999999999999999999999876655544


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCC
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  358 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  358 (379)
                      ..+......                       ++                          ...+..++++|++||+.||.
T Consensus       208 ~~i~~~~~~-----------------------~~--------------------------~~~~~~~~~li~~~l~~dp~  238 (291)
T cd05612         208 EKILAGKLE-----------------------FP--------------------------RHLDLYAKDLIKKLLVVDRT  238 (291)
T ss_pred             HHHHhCCcC-----------------------CC--------------------------ccCCHHHHHHHHHHcCCCHH
Confidence            333221111                       11                          13466899999999999999


Q ss_pred             CCcC-----HHHHhcCCCCCCC
Q 017021          359 DRLT-----AREALRHPFFTRD  375 (379)
Q Consensus       359 ~Rpt-----a~e~l~hp~f~~~  375 (379)
                      +||+     ++|+++||||+..
T Consensus       239 ~R~~~~~~~~~~~l~h~~~~~~  260 (291)
T cd05612         239 RRLGNMKNGADDVKNHRWFKSV  260 (291)
T ss_pred             HccCCccCCHHHHhcCccccCC
Confidence            9995     9999999999764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=7.1e-46  Score=340.56  Aligned_cols=279  Identities=32%  Similarity=0.586  Sum_probs=218.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.+.||+|+||.||+|+++.+++.||+|++....   .......+|+.++..+     .|+|++++++.+...+..|
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~   76 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTL-----KQENIVELKEAFRRRGKLY   76 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhC-----CCccccchhhhEecCCEEE
Confidence            4788899999999999999999999999999997432   2344566788888887     7799999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +||||+.+++.+.+.... ..+++..+..++.|++.||.|||+.|++||||||+||++                      
T Consensus        77 lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill----------------------  133 (287)
T cd07848          77 LVFEYVEKNMLELLEEMP-NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLI----------------------  133 (287)
T ss_pred             EEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----------------------
Confidence            999999444445554432 358999999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                           +.++.++|+|||.+.......    ....||+.|+|||++.+..++.++|+|||||++|+|++|+.||.+.+..+
T Consensus       134 -----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~  208 (287)
T cd07848         134 -----SHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID  208 (287)
T ss_pred             -----cCCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH
Confidence                 455567778888776433221    23468999999999998889999999999999999999999999888777


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.+..+++|...++.........    ...++...             .............+.++.+||++||+.|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-------------~~~~~~~~~~~~~s~~~~dll~~~L~~~  271 (287)
T cd07848         209 QLFTIQKVLGPLPAEQMKLFYSNPRFH----GLRFPAVN-------------HPQSLERRYLGILSGVLLDLMKNLLKLN  271 (287)
T ss_pred             HHHHHHHhhCCCCHHHHHhhhccchhc----ccccCccc-------------CcccHHHhhhcccCHHHHHHHHHHccCC
Confidence            777888888888877665432211100    01111000             0001111223456788999999999999


Q ss_pred             CCCCcCHHHHhcCCCC
Q 017021          357 PTDRLTAREALRHPFF  372 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f  372 (379)
                      |++|||++|+++||||
T Consensus       272 P~~R~s~~~~l~hp~f  287 (287)
T cd07848         272 PTDRYLTEQCLNHPAF  287 (287)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=2.2e-46  Score=350.84  Aligned_cols=254  Identities=28%  Similarity=0.428  Sum_probs=211.9

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      .....|++.+.||+|+||.||+|+++.+++.||+|++....    .....+..|+.++..+     .|+|++++++.+..
T Consensus        15 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~   89 (329)
T PTZ00263         15 WKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-----SHPFIVNMMCSFQD   89 (329)
T ss_pred             CCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-----CCCCCCcEEEEEEc
Confidence            33456788899999999999999999999999999997432    2234566788888887     78999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      ++..|+||||+ +++|.+.+....  .+++..+..++.||+.||+|||+.||+||||||+||++                
T Consensus        90 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll----------------  151 (329)
T PTZ00263         90 ENRVYFLLEFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL----------------  151 (329)
T ss_pred             CCEEEEEEcCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE----------------
Confidence            99999999999 899999998764  68899999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                                 +.++.++|+|||.+...........||+.|+|||++.+..++.++|||||||++|+|++|..||...+.
T Consensus       152 -----------~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~  220 (329)
T PTZ00263        152 -----------DNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP  220 (329)
T ss_pred             -----------CCCCCEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH
Confidence                       556678888998887655555556799999999999998899999999999999999999999987655


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .+....+.+..                       ..+|                          ...+..+.+||.+||+
T Consensus       221 ~~~~~~i~~~~-----------------------~~~p--------------------------~~~~~~~~~li~~~L~  251 (329)
T PTZ00263        221 FRIYEKILAGR-----------------------LKFP--------------------------NWFDGRARDLVKGLLQ  251 (329)
T ss_pred             HHHHHHHhcCC-----------------------cCCC--------------------------CCCCHHHHHHHHHHhh
Confidence            44433322211                       1111                          1245678999999999


Q ss_pred             cCCCCCcC-----HHHHhcCCCCCCCC
Q 017021          355 YDPTDRLT-----AREALRHPFFTRDH  376 (379)
Q Consensus       355 ~dP~~Rpt-----a~e~l~hp~f~~~~  376 (379)
                      .||.+||+     ++++++||||++..
T Consensus       252 ~dP~~R~~~~~~~~~~ll~hp~f~~~~  278 (329)
T PTZ00263        252 TDHTKRLGTLKGGVADVKNHPYFHGAN  278 (329)
T ss_pred             cCHHHcCCCCCCCHHHHhcCCccCCCC
Confidence            99999997     79999999998753

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-46  Score=349.25  Aligned_cols=264  Identities=32%  Similarity=0.516  Sum_probs=227.3

Q ss_pred             eeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch----hhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           37 YIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        37 ~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      ........|++.+.||.|.||.||++..+.||+.+|+|.+.+...    ......+|+.+++++.    .|+|++.+.+.
T Consensus        29 ~~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~----~hpniv~l~~~  104 (382)
T KOG0032|consen   29 FSEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLS----GHPNIVQLKDA  104 (382)
T ss_pred             ccccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhcc----CCCCEEEEEEE
Confidence            344455678999999999999999999999999999999974322    3457788999999983    38999999999


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                      |++...+++|||+| ||.|.+.+...   .+++..+..++.|++.|+.|||+.|++|||+||+|+|+....         
T Consensus       105 ~e~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~---------  172 (382)
T KOG0032|consen  105 FEDPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKD---------  172 (382)
T ss_pred             EEcCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeecccc---------
Confidence            99999999999999 99999999886   299999999999999999999999999999999999995431         


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCC
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                                    .....++++|||++.......  ...+||+.|+|||++....|+..+||||+|+++|.|++|.+||
T Consensus       173 --------------~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF  238 (382)
T KOG0032|consen  173 --------------EGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPF  238 (382)
T ss_pred             --------------CCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCC
Confidence                          234689999999998777732  5578999999999999999999999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      .+.+..+....+.+....++.                                             ..|+..+..++++|
T Consensus       239 ~~~~~~~~~~~i~~~~~~f~~---------------------------------------------~~w~~is~~akd~i  273 (382)
T KOG0032|consen  239 WGETEFEIFLAILRGDFDFTS---------------------------------------------EPWDDISESAKDFI  273 (382)
T ss_pred             cCCChhHHHHHHHcCCCCCCC---------------------------------------------CCccccCHHHHHHH
Confidence            998877766655443333222                                             23456788999999


Q ss_pred             hhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          350 QGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +.||..||.+|+||.++|+|||+++.
T Consensus       274 ~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  274 RKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             HHhcccCcccCCCHHHHhcCccccCC
Confidence            99999999999999999999999975

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-46  Score=339.47  Aligned_cols=256  Identities=31%  Similarity=0.468  Sum_probs=205.3

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchh-hHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc--e
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN--H  118 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~--~  118 (379)
                      ..++...+.||+|+||.||++.++.+|...|+|.+...... .....+|+.++.++     .|++||++++......  .
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l-----~~p~IV~~~G~~~~~~~~~   90 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRL-----NHPNIVQYYGSSSSRENDE   90 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhC-----CCCCEEeeCCccccccCee
Confidence            45678889999999999999999999999999998754211 34567899999998     5899999999855444  7


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      ++++|||+ +|+|.+++...++ .+++..++.+..||+.||+|||++|++||||||+|||++.                 
T Consensus        91 ~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~-----------------  152 (313)
T KOG0198|consen   91 YNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDP-----------------  152 (313)
T ss_pred             eEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeC-----------------
Confidence            99999999 9999999999876 7999999999999999999999999999999999999943                 


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCC---C---CCcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERP---D---QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~---~---~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                               .++.+||+|||.+.....   .   .....||+.|+|||++... ..++++|||||||++.||+||+.||.
T Consensus       153 ---------~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~  223 (313)
T KOG0198|consen  153 ---------SNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWS  223 (313)
T ss_pred             ---------CCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcch
Confidence                     146778888887765442   1   1346899999999999852 33469999999999999999999997


Q ss_pred             CC-chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          271 TH-ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       271 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      .. ...+....+... ...|                                              ..+...+.++++||
T Consensus       224 ~~~~~~~~~~~ig~~-~~~P----------------------------------------------~ip~~ls~~a~~Fl  256 (313)
T KOG0198|consen  224 EFFEEAEALLLIGRE-DSLP----------------------------------------------EIPDSLSDEAKDFL  256 (313)
T ss_pred             hhcchHHHHHHHhcc-CCCC----------------------------------------------CCCcccCHHHHHHH
Confidence            63 222211111110 0111                                              11234678999999


Q ss_pred             hhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          350 QGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      .+||+.||.+||||+++|.|||...++
T Consensus       257 ~~C~~~~p~~Rpta~eLL~hpf~~~~~  283 (313)
T KOG0198|consen  257 RKCFKRDPEKRPTAEELLEHPFLKQNS  283 (313)
T ss_pred             HHHhhcCcccCcCHHHHhhChhhhccc
Confidence            999999999999999999999997754

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-46  Score=356.55  Aligned_cols=255  Identities=25%  Similarity=0.392  Sum_probs=218.5

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      .+....|+++++||+|.||+|++|..+.+++.+|||.+++.    +...+..+.|..++...    ..||.++.++..|+
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la----~~HPFL~~L~~~fQ  439 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELA----NRHPFLVNLFSCFQ  439 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHh----ccCCeEeecccccc
Confidence            55566788999999999999999999999999999999863    33455666777777666    36899999999999


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      +..++|+||||+ ||++..+.+.   +.+++..++-|+.+|+.||+|||+.|||+||||.+|||+               
T Consensus       440 T~~~l~fvmey~~Ggdm~~~~~~---~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL---------------  501 (694)
T KOG0694|consen  440 TKEHLFFVMEYVAGGDLMHHIHT---DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL---------------  501 (694)
T ss_pred             cCCeEEEEEEecCCCcEEEEEec---ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE---------------
Confidence            999999999999 8884333332   369999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccC---CCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                                  +..+.+||+|||+++..-   ....+++||+.|+|||++.+..|+.++|+|||||+||+|+.|.+||.
T Consensus       502 ------------D~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~  569 (694)
T KOG0694|consen  502 ------------DTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFP  569 (694)
T ss_pred             ------------cccCcEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCC
Confidence                        677788888888887422   23367899999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      +.++.+.+..|.......|.                                                 -.+.++.++++
T Consensus       570 gddEee~FdsI~~d~~~yP~-------------------------------------------------~ls~ea~~il~  600 (694)
T KOG0694|consen  570 GDDEEEVFDSIVNDEVRYPR-------------------------------------------------FLSKEAIAIMR  600 (694)
T ss_pred             CCCHHHHHHHHhcCCCCCCC-------------------------------------------------cccHHHHHHHH
Confidence            99999988877664433332                                                 35678999999


Q ss_pred             hccccCCCCCcC-----HHHHhcCCCCCCCC
Q 017021          351 GLLRYDPTDRLT-----AREALRHPFFTRDH  376 (379)
Q Consensus       351 ~~L~~dP~~Rpt-----a~e~l~hp~f~~~~  376 (379)
                      ++|++||++|..     +.+|.+||||...+
T Consensus       601 ~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~  631 (694)
T KOG0694|consen  601 RLLRKNPEKRLGSGERDAEDIKKHPFFRSID  631 (694)
T ss_pred             HHhccCcccccCCCCCCchhhhhCCccccCC
Confidence            999999999995     68999999999765

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.7e-45  Score=340.93  Aligned_cols=284  Identities=25%  Similarity=0.409  Sum_probs=212.5

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ..|++.++||+|+||.||+|+++.+++.||+|+++...  .......+|+.+++.+     .|+|++.+++++.++...+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~   79 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGL-----KHANIVLLHDIIHTKETLT   79 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhC-----CCCCcCeEEEEEecCCeEE
Confidence            45889999999999999999999999999999987432  2234566788888888     7899999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +||||++++|.+++.... ..+++..+..++.|++.||+|||+.||+||||||+||+++                     
T Consensus        80 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---------------------  137 (303)
T cd07869          80 LVFEYVHTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS---------------------  137 (303)
T ss_pred             EEEECCCcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---------------------
Confidence            999999889998887653 3588999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCch-H
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN-L  275 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~-~  275 (379)
                            .++.++|+|||.+.......   ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+... .
T Consensus       138 ------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  211 (303)
T cd07869         138 ------DTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ  211 (303)
T ss_pred             ------CCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH
Confidence                  44557777777665322211   23467899999999865 4578999999999999999999999987543 3


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+....+.++...|+...... .+.... ...             ..........  .....+..+.+||++||+.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~-------------~~~~~~~~~~--~~~~~~~~~~dli~~mL~~  274 (303)
T cd07869         212 DQLERIFLVLGTPNEDTWPGVHSLP-HFKPER-FTL-------------YSPKNLRQAW--NKLSYVNHAEDLASKLLQC  274 (303)
T ss_pred             HHHHHHHHHhCCCChhhccchhhcc-cccccc-ccc-------------cCCccHHHHh--hccCCChHHHHHHHHHhcc
Confidence            4444555555655554444322110 000000 000             0000000000  0112457899999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ||.+|||+.|+++||||++..
T Consensus       275 dp~~R~s~~~~l~h~~f~~~~  295 (303)
T cd07869         275 FPKNRLSAQAALSHEYFSDLP  295 (303)
T ss_pred             CchhccCHHHHhcCcccccCC
Confidence            999999999999999998754

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=2.4e-45  Score=344.91  Aligned_cols=279  Identities=31%  Similarity=0.494  Sum_probs=216.3

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec----
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR----  116 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~----  116 (379)
                      .|++.++||+|+||.||+|.++.+++.||+|++...   ......+.+|+.++..+     .|+|++++++++...    
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~~   75 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLL-----RHPDIVEIKHIMLPPSRRE   75 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhC-----CCCCEeeecceEeccCCCC
Confidence            478899999999999999999999999999998632   22234567799888888     789999999887543    


Q ss_pred             -ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          117 -NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       117 -~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                       ...|+||||++++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||+++                
T Consensus        76 ~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~----------------  137 (338)
T cd07859          76 FKDIYVVFELMESDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILAN----------------  137 (338)
T ss_pred             CceEEEEEecCCCCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC----------------
Confidence             3589999999889999987754  589999999999999999999999999999999999994                


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhC--CCCCCccchHhHHHHHHHHHhCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                                 .++.++|+|||.+.......      ....||+.|+|||++.+  ..++.++|||||||++|+|++|+.
T Consensus       138 -----------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~  206 (338)
T cd07859         138 -----------ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKP  206 (338)
T ss_pred             -----------CCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCC
Confidence                       45566777777665322111      22468999999999865  578899999999999999999999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhh-hhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      ||.+.+.......+....+.++......+.... ..+...-...              ...+     ........++.+.
T Consensus       207 pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--------------~~~~-----~~~~~~~~~~~~~  267 (338)
T cd07859         207 LFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKK--------------QPVP-----FSQKFPNADPLAL  267 (338)
T ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhccc--------------CCCc-----hHHhcCCCChHHH
Confidence            999888777777777778887777666543221 1111100000              0000     0011223567889


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ++|.+||+.||++|||++|+++||||++.
T Consensus       268 ~li~~~l~~~P~~Rpt~~e~l~hp~f~~~  296 (338)
T cd07859         268 RLLERLLAFDPKDRPTAEEALADPYFKGL  296 (338)
T ss_pred             HHHHHHcCcCcccCCCHHHHhcCchhhhc
Confidence            99999999999999999999999999763

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.3e-46  Score=334.44  Aligned_cols=278  Identities=29%  Similarity=0.495  Sum_probs=224.0

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec--c---
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--N---  117 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~--~---  117 (379)
                      .+|.-.+.+|.|+||.||+|...++++.||||++-.+..   ...+|+++++.+     .|+||+++..+|...  +   
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r---~knrEl~im~~l-----~HpNIV~L~~~f~~~~~~d~~   95 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR---YKNRELQIMRKL-----DHPNIVRLLYFFSSSTESDEV   95 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC---cCcHHHHHHHhc-----CCcCeeeEEEEEEecCCCchh
Confidence            445566999999999999999999999999999865543   334599999977     889999998887642  2   


Q ss_pred             eEEEEEeCCCCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          118 HICIVFEKLGSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       118 ~~~lv~e~~~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      ...+||||+..+|.+.++..  .+..++...+.-+.+||+.||.|||+.||+||||||+|+|++.               
T Consensus        96 ~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~---------------  160 (364)
T KOG0658|consen   96 YLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDP---------------  160 (364)
T ss_pred             HHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcC---------------
Confidence            56799999999999999842  2346889999999999999999999999999999999999963               


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                 ..+.+||||||.|+......  .+..-|..|.|||.+.+. .|+.+.||||+||++.||+-|++.|.+.
T Consensus       161 -----------~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~  229 (364)
T KOG0658|consen  161 -----------DTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD  229 (364)
T ss_pred             -----------CCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC
Confidence                       45788999999998655444  344568899999999874 5999999999999999999999999999


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..++...+.+.+|.++.+..+.+.....   +.....+.             ..+..    .-.....++++.+|+.++
T Consensus       230 s~~dQL~eIik~lG~Pt~e~I~~mn~~y~---~~~~p~ik-------------~~~~~----~~~~~~~~~d~~dll~~~  289 (364)
T KOG0658|consen  230 SSVDQLVEIIKVLGTPTREDIKSMNPNYT---EFKFPQIK-------------AHPWH----KVFFKRLPPDALDLLSKL  289 (364)
T ss_pred             CHHHHHHHHHHHhCCCCHHHHhhcCcccc---cccCcccc-------------cccce----eecccCCCHHHHHHHHHH
Confidence            99999999999999999876655433221   11111110             01100    012345778999999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      |+++|.+|.+|.|+++||||.+
T Consensus       290 L~Y~P~~R~~~~~~l~h~fFde  311 (364)
T KOG0658|consen  290 LQYSPSKRLSALEALAHPFFDE  311 (364)
T ss_pred             hccChhhcCCHHHHhcchhhHH
Confidence            9999999999999999999975

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=3.4e-45  Score=336.55  Aligned_cols=278  Identities=28%  Similarity=0.467  Sum_probs=212.8

Q ss_pred             hhhhhhccccccceeEEEEEecC-CCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee-----
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRE-RKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD-----  114 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~-~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~-----  114 (379)
                      .|++.+.||+|+||.||+|++.. +++.||+|+++...   .......+|+.++..+..  ..|+|++++++++.     
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~hpniv~~~~~~~~~~~~   79 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET--FEHPNVVRLFDVCTVSRTD   79 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcc--cCCCCcceEEEEEecccCC
Confidence            58899999999999999999854 57889999986422   223445567777766633  25799999998874     


Q ss_pred             ecceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          115 YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       115 ~~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .....++||||++++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||++                
T Consensus        80 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~----------------  143 (290)
T cd07862          80 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV----------------  143 (290)
T ss_pred             CCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE----------------
Confidence            3457999999998899999987655568999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCC--CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                 +.++.++|+|||.+......  .....||+.|+|||.+.+..++.++|||||||++|+|++|++||.+.
T Consensus       144 -----------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  212 (290)
T cd07862         144 -----------TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS  212 (290)
T ss_pred             -----------cCCCCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCC
Confidence                       45556788888877543322  23356899999999998888999999999999999999999999988


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+....+....+.++...++...........                      +.............+..+.++|.+|
T Consensus       213 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~li~~~  270 (290)
T cd07862         213 SDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH----------------------SKSAQPIEKFVTDIDELGKDLLLKC  270 (290)
T ss_pred             CHHHHHHHHHHHhCCCChhhchhhhcccchhcc----------------------CCCCCCHHHHccCCCHHHHHHHHHH
Confidence            887777777776665544333221111000000                      0000111122234677899999999


Q ss_pred             cccCCCCCcCHHHHhcCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f  372 (379)
                      |+.||++|||+.|+|+||||
T Consensus       271 l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         271 LTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             hccCchhcCCHHHHhcCCCC
Confidence            99999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1e-45  Score=339.38  Aligned_cols=258  Identities=23%  Similarity=0.367  Sum_probs=207.0

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      +|++.+.||+|+||.||+|.+..+++.||+|++....    .....+..|+.++..+     .|++++.+.+.+.+++..
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-----~~~~iv~~~~~~~~~~~~   75 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-----NSRFVVSLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-----CCCcEEEEEEEEccCCeE
Confidence            4778899999999999999999999999999986432    2223456788888887     778999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      ++||||+ +++|.+.+.......+++..+..++.|++.||.|||+.|++||||||+||++                    
T Consensus        76 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill--------------------  135 (285)
T cd05631          76 CLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILL--------------------  135 (285)
T ss_pred             EEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE--------------------
Confidence            9999999 8999988865544468999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                             +.++.++|+|||.+.......  ....||..|+|||++.+..++.++|||||||++|+|++|+.||...+...
T Consensus       136 -------~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~  208 (285)
T cd05631         136 -------DDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV  208 (285)
T ss_pred             -------CCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch
Confidence                   455668888888776532221  23468999999999999899999999999999999999999998654322


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.......                   .                          .......+.++.+||++||+.|
T Consensus       209 ~~~~~~~~~~~~-------------------~--------------------------~~~~~~~s~~~~~li~~~l~~~  243 (285)
T cd05631         209 KREEVDRRVKED-------------------Q--------------------------EEYSEKFSEDAKSICRMLLTKN  243 (285)
T ss_pred             hHHHHHHHhhcc-------------------c--------------------------ccCCccCCHHHHHHHHHHhhcC
Confidence            221111111000                   0                          0112346778999999999999


Q ss_pred             CCCCcC-----HHHHhcCCCCCCCCcC
Q 017021          357 PTDRLT-----AREALRHPFFTRDHLR  378 (379)
Q Consensus       357 P~~Rpt-----a~e~l~hp~f~~~~~~  378 (379)
                      |.+||+     ++++++||||++.+.+
T Consensus       244 P~~R~~~~~~~~~~~~~h~~~~~~~~~  270 (285)
T cd05631         244 PKERLGCRGNGAAGVKQHPIFKNINFK  270 (285)
T ss_pred             HHHhcCCCCCCHHHHhcCHhhcCCCHH
Confidence            999997     9999999999987643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=2e-45  Score=343.54  Aligned_cols=244  Identities=25%  Similarity=0.427  Sum_probs=201.0

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.||+|+||.||+|+++.+|+.||+|+++...    ........|+.++..+     .|++++.+.+.+..++..|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~hp~i~~~~~~~~~~~~~~lv~e   75 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-----RHPFLTALKYSFQTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-----CCCCCCCEEEEEEcCCEEEEEEe
Confidence            46899999999999999999999999997432    2234456688888777     77999999999999999999999


Q ss_pred             CC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          125 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                      |+ +++|.+.+....  .+++..+..++.||+.||+|||+.||+||||||+||++                         
T Consensus        76 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll-------------------------  128 (323)
T cd05571          76 YANGGELFFHLSRER--VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML-------------------------  128 (323)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE-------------------------
Confidence            99 899999987754  68999999999999999999999999999999999999                         


Q ss_pred             cCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          204 RMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                        +.++.++|+|||++.....   ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......
T Consensus       129 --~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~  206 (323)
T cd05571         129 --DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL  206 (323)
T ss_pred             --CCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHH
Confidence              4556678888887764221   12345799999999999998999999999999999999999999987655443332


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      +......                       +                          ....+.++.+||.+||+.||++|
T Consensus       207 ~~~~~~~-----------------------~--------------------------p~~~~~~~~~li~~~L~~dP~~R  237 (323)
T cd05571         207 ILMEEIR-----------------------F--------------------------PRTLSPEAKSLLAGLLKKDPKQR  237 (323)
T ss_pred             HHcCCCC-----------------------C--------------------------CCCCCHHHHHHHHHHccCCHHHc
Confidence            2211111                       1                          12356789999999999999999


Q ss_pred             c-----CHHHHhcCCCCCCC
Q 017021          361 L-----TAREALRHPFFTRD  375 (379)
Q Consensus       361 p-----ta~e~l~hp~f~~~  375 (379)
                      |     ++.++++||||...
T Consensus       238 ~~~~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         238 LGGGPEDAKEIMEHRFFASI  257 (323)
T ss_pred             CCCCCCCHHHHHcCCCcCCC
Confidence            9     89999999999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=1.2e-44  Score=344.78  Aligned_cols=281  Identities=27%  Similarity=0.468  Sum_probs=221.6

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc----
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN----  117 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~----  117 (379)
                      |++.++||+|+||.||+|.+..+++.||+|++...   ......+.+|+.++..+     .|+|++.+++++....    
T Consensus         2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~   76 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFF-----KHDNVLSALDILQPPHIDPF   76 (372)
T ss_pred             CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhC-----CCCCcCCHhheecCCCcccc
Confidence            67889999999999999999999999999998642   12234567788888887     7899999999998776    


Q ss_pred             -eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 -HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 -~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                       ..|+|+||++++|.+.+....  .++...+..++.||+.||.|||+.|++||||||+||++                  
T Consensus        77 ~~~~lv~e~~~~~l~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili------------------  136 (372)
T cd07853          77 EEIYVVTELMQSDLHKIIVSPQ--PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV------------------  136 (372)
T ss_pred             ceEEEEeeccccCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE------------------
Confidence             899999999888988886654  68999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                               +.++.++|+|||.+.......    ....+|..|+|||.+.+. .++.++|||||||++|+|++|+.||.+
T Consensus       137 ---------~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  207 (372)
T cd07853         137 ---------NSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQA  207 (372)
T ss_pred             ---------CCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCC
Confidence                     445567777777665432221    223578899999998774 478999999999999999999999999


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .+..+....+.+..+.++...+..................+.                 ...........+.++.+||.+
T Consensus       208 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~li~~  270 (372)
T cd07853         208 QSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPS-----------------LPVLYTLSSQATHEAVHLLCR  270 (372)
T ss_pred             CCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCc-----------------hHHhcccCCCCCHHHHHHHHH
Confidence            888888888888888777665555444443333222111110                 000011223457789999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ||+.||.+|||+.|+++||||.+..
T Consensus       271 mL~~dP~~R~t~~e~l~hp~~~~~~  295 (372)
T cd07853         271 MLVFDPDKRISAADALAHPYLDEGR  295 (372)
T ss_pred             hCCCChhhCcCHHHHhcCHhhCCCc
Confidence            9999999999999999999998854

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=3.8e-45  Score=343.54  Aligned_cols=253  Identities=28%  Similarity=0.431  Sum_probs=209.7

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCC-ceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~-~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      .....|++.+.||+|+||.||+|.++.++ ..||+|++....    .....+..|+.++..+     .|+||+++++++.
T Consensus        27 ~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~Iv~~~~~~~  101 (340)
T PTZ00426         27 MKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-----NHPFCVNLYGSFK  101 (340)
T ss_pred             CChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-----CCCCCcceEEEEE
Confidence            34456888899999999999999877655 689999986432    2334556788888877     7899999999999


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      +++..|+||||+ +++|.+++....  .+++..+..++.||+.||.|||+.|++||||||+||++               
T Consensus       102 ~~~~~~lv~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---------------  164 (340)
T PTZ00426        102 DESYLYLVLEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL---------------  164 (340)
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---------------
Confidence            999999999999 999999998764  68999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                  +.++.++|+|||.+...........||+.|+|||++.+..++.++|+|||||++|+|++|..||...+
T Consensus       165 ------------~~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~  232 (340)
T PTZ00426        165 ------------DKDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE  232 (340)
T ss_pred             ------------CCCCCEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC
Confidence                        55567888888888765544455679999999999998889999999999999999999999998766


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      .......+.+.....|                                                 ...+..+.++|++||
T Consensus       233 ~~~~~~~i~~~~~~~p-------------------------------------------------~~~~~~~~~li~~~l  263 (340)
T PTZ00426        233 PLLIYQKILEGIIYFP-------------------------------------------------KFLDNNCKHLMKKLL  263 (340)
T ss_pred             HHHHHHHHhcCCCCCC-------------------------------------------------CCCCHHHHHHHHHHc
Confidence            5444433322111111                                                 134567899999999


Q ss_pred             ccCCCCCc-----CHHHHhcCCCCCCC
Q 017021          354 RYDPTDRL-----TAREALRHPFFTRD  375 (379)
Q Consensus       354 ~~dP~~Rp-----ta~e~l~hp~f~~~  375 (379)
                      +.||.+|+     |++++++||||.+.
T Consensus       264 ~~dp~~R~~~~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        264 SHDLTKRYGNLKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             ccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            99999995     89999999999864

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=1.8e-44  Score=331.26  Aligned_cols=278  Identities=28%  Similarity=0.493  Sum_probs=212.4

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee-----
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-----  115 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~-----  115 (379)
                      .|++.+.||+|+||.||+|+++.+++.||+|.++...   .......+|+.++..+.+  ..|+|++++++++..     
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~h~ni~~~~~~~~~~~~~~   78 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEA--FDHPNIVRLMDVCATSRTDR   78 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhh--cCCCCeeeeeeeeccccCCC
Confidence            4788899999999999999999999999999987422   122345567777777643  257999999988764     


Q ss_pred             cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          116 RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       116 ~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      ....+++||++.++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||++                 
T Consensus        79 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili-----------------  141 (288)
T cd07863          79 ETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV-----------------  141 (288)
T ss_pred             CceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE-----------------
Confidence            356899999997799999887554568999999999999999999999999999999999999                 


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                +.++.++|+|||.+.......  ....||..|+|||++.+..++.++|||||||++|+|++|++||.+..
T Consensus       142 ----------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~  211 (288)
T cd07863         142 ----------TSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS  211 (288)
T ss_pred             ----------CCCCCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCC
Confidence                      445567777777776443222  23467899999999988889999999999999999999999998877


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+....+.+....|+.........       .               .+.............+..+.++|.+||
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---------------~~~~~~~~~~~~~~~~~~~~~li~~~L  269 (288)
T cd07863         212 EADQLGKIFDLIGLPPEDDWPRDVTLPRGA-------F---------------SPRGPRPVQSVVPEIEESGAQLLLEML  269 (288)
T ss_pred             HHHHHHHHHHHhCCCChhhCcccccccccc-------c---------------CCCCCCchHHhCcCcCHHHHHHHHHHh
Confidence            766666666666554433322110000000       0               000001112223356678999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCC
Q 017021          354 RYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f  372 (379)
                      +.||++|||+.|++.||||
T Consensus       270 ~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         270 TFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             ccCcccCCCHHHHhcCCCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.8e-45  Score=342.39  Aligned_cols=258  Identities=25%  Similarity=0.372  Sum_probs=211.9

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.++||+|+||.||+|++..+++.||+|+++...    .....+..|+.++..+     .|++++++++.+..++..
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~iv~~~~~~~~~~~~   76 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT-----KSEWLVKLLYAFQDDEYL   76 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC-----CCCCCccEEEEEEcCCEE
Confidence            4788999999999999999999999999999997432    2234456677777777     689999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++....  .+++..+..++.||+.||.|||+.|++||||||+||++                    
T Consensus        77 ~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~--------------------  134 (333)
T cd05600          77 YLAMEYVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI--------------------  134 (333)
T ss_pred             EEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE--------------------
Confidence            9999999 999999998764  68999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  278 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~  278 (379)
                             +.++.++|+|||.+...........||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+..
T Consensus       135 -------~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~  207 (333)
T cd05600         135 -------DASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETW  207 (333)
T ss_pred             -------CCCCCEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHH
Confidence                   5566788999998876555555667999999999999889999999999999999999999999876665544


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCC
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  358 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  358 (379)
                      ..+........                     .+...           .         .....+.++.++|.+||+.+|.
T Consensus       208 ~~i~~~~~~~~---------------------~~~~~-----------~---------~~~~~s~~~~~li~~~l~~~~~  246 (333)
T cd05600         208 ENLKYWKETLQ---------------------RPVYD-----------D---------PRFNLSDEAWDLITKLINDPSR  246 (333)
T ss_pred             HHHHhcccccc---------------------CCCCC-----------c---------cccccCHHHHHHHHHHhhChhh
Confidence            43332111000                     00000           0         0013567899999999999999


Q ss_pred             CCcCHHHHhcCCCCCCCC
Q 017021          359 DRLTAREALRHPFFTRDH  376 (379)
Q Consensus       359 ~Rpta~e~l~hp~f~~~~  376 (379)
                      +||+++++++||||++..
T Consensus       247 rr~s~~~ll~h~~~~~~~  264 (333)
T cd05600         247 RFGSLEDIKNHPFFKEVD  264 (333)
T ss_pred             hcCCHHHHHhCcccCCCC
Confidence            999999999999998753

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=9.7e-45  Score=351.77  Aligned_cols=280  Identities=27%  Similarity=0.503  Sum_probs=216.4

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee-----
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-----  115 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~-----  115 (379)
                      ....|++.++||+|+||.||+|.+..+++.||+|++....   ....+|+.++..+     .|+|++++.+++..     
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l-----~h~niv~l~~~~~~~~~~~  135 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNL-----NHINIIFLKDYYYTECFKK  135 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhc-----CCCCCcceeeeEeeccccc
Confidence            3456899999999999999999999999999999986432   2234688888888     78999998877642     


Q ss_pred             ---cceEEEEEeCCCCCHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCc
Q 017021          116 ---RNHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       116 ---~~~~~lv~e~~~~sL~~~l~~--~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                         ..++++||||++++|.+++..  .....+++..+..++.||+.||.|||+.||+||||||+||+++.          
T Consensus       136 ~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~----------  205 (440)
T PTZ00036        136 NEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP----------  205 (440)
T ss_pred             CCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC----------
Confidence               235789999998888888754  22346899999999999999999999999999999999999942          


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCC--CCcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCC
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                                      ....++|+|||.+......  .....||+.|+|||++.+. .++.++|||||||++|+|++|.+
T Consensus       206 ----------------~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~  269 (440)
T PTZ00036        206 ----------------NTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYP  269 (440)
T ss_pred             ----------------CCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence                            2245888888888644322  2345689999999998764 68999999999999999999999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ||.+.+..+....+.+..+.++.+.+.........      ..++..              ........+....+.++.+
T Consensus       270 pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~------~~~~~~--------------~~~~l~~~~p~~~~~~~~~  329 (440)
T PTZ00036        270 IFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYAD------IKFPDV--------------KPKDLKKVFPKGTPDDAIN  329 (440)
T ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhc------ccCCcc--------------CchhHHHHhccCCCHHHHH
Confidence            99998888888888888887776655433221100      011110              0001111223346778999


Q ss_pred             HHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          348 LLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      ||.+||++||.+||||.|+++||||.+
T Consensus       330 li~~~L~~dP~~R~ta~e~l~hp~f~~  356 (440)
T PTZ00036        330 FISQFLKYEPLKRLNPIEALADPFFDD  356 (440)
T ss_pred             HHHHHCCCChhHCcCHHHHhCChhHHh
Confidence            999999999999999999999999975

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.1e-46  Score=317.21  Aligned_cols=251  Identities=30%  Similarity=0.496  Sum_probs=213.2

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeec---------cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---------IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~---------~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      |.-.+.||.|..++|-++..+.||+.+|+|++.-         .....+...+|+.++.++    .+||+|+.+.+++++
T Consensus        19 y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv----~GHP~II~l~D~yes   94 (411)
T KOG0599|consen   19 YEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQV----MGHPYIIDLQDVYES   94 (411)
T ss_pred             cChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHh----cCCCcEEEeeeeccC
Confidence            4556889999999999999999999999999852         122345556799999998    478999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      +.++++|+|.| .|.|.|++.+.-  .+++...+.++.|++.|++|||..+|+||||||+|||+                
T Consensus        95 ~sF~FlVFdl~prGELFDyLts~V--tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl----------------  156 (411)
T KOG0599|consen   95 DAFVFLVFDLMPRGELFDYLTSKV--TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL----------------  156 (411)
T ss_pred             cchhhhhhhhcccchHHHHhhhhe--eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee----------------
Confidence            99999999999 999999998875  69999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhC------CCCCCccchHhHHHHHHHHHhCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG------LGWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~------~~~~~~sDvwSlG~il~~l~~g~  266 (379)
                                 +.+..++|+|||++....+..  ...+|||+|+|||.+..      ..|+..+|+||+|+|+|.|+.|.
T Consensus       157 -----------ddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGc  225 (411)
T KOG0599|consen  157 -----------DDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGC  225 (411)
T ss_pred             -----------ccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCC
Confidence                       677789999999998766654  45799999999999853      45889999999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      +||.-....-....|++.-..+.+.                                             .|+..+...+
T Consensus       226 pPFwHRkQmlMLR~ImeGkyqF~sp---------------------------------------------eWadis~~~K  260 (411)
T KOG0599|consen  226 PPFWHRKQMLMLRMIMEGKYQFRSP---------------------------------------------EWADISATVK  260 (411)
T ss_pred             CchhHHHHHHHHHHHHhcccccCCc---------------------------------------------chhhccccHH
Confidence            9997655544444444433333222                                             2445788999


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFFT  373 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f~  373 (379)
                      |||.+||+.||.+|.|++|+|+||||.
T Consensus       261 dLIsrlLqVdp~~Ritake~LaHpff~  287 (411)
T KOG0599|consen  261 DLISRLLQVDPTKRITAKEALAHPFFI  287 (411)
T ss_pred             HHHHHHHeeCchhcccHHHHhcChHHH
Confidence            999999999999999999999999994

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1.7e-44  Score=335.17  Aligned_cols=282  Identities=25%  Similarity=0.442  Sum_probs=222.7

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ..|++.++||+|+||.||+|+++.+++.||+|.++...  .......+|+.++..+     .|+|++++++++..++..+
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~   80 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDL-----KHANIVTLHDIVHTDKSLT   80 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhC-----CCCCcceEEEEEeeCCeEE
Confidence            35788899999999999999999999999999987432  2234566788888887     7799999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +||||+.++|.+.+.... ..++...+..++.||+.||.|||+.||+||||||+||++                      
T Consensus        81 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill----------------------  137 (309)
T cd07872          81 LVFEYLDKDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLI----------------------  137 (309)
T ss_pred             EEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----------------------
Confidence            999999779998887654 357899999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                           +.++.++|+|||.+.......   ....+|..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..+
T Consensus       138 -----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~  212 (309)
T cd07872         138 -----NERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED  212 (309)
T ss_pred             -----CCCCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence                 445567777777765432221   23457889999999865 457899999999999999999999999888888


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.+..+.++...|+.+.........    ..+....          .     .........+.++.++|.+||+.|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----------~-----~~~~~~~~~~~~~~~li~~~L~~d  273 (309)
T cd07872         213 ELHLIFRLLGTPTEETWPGISSNDEFKNY----NFPKYKP----------Q-----PLINHAPRLDTEGIELLTKFLQYE  273 (309)
T ss_pred             HHHHHHHHhCCCCHHHHhhhcchhhhhhh----hcCccCC----------C-----chhhhccCCCHHHHHHHHHhccCC
Confidence            88888888888888777665433221110    0110000          0     000112245678999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~~  376 (379)
                      |.+|||++|+++||||....
T Consensus       274 p~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         274 SKKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             hhhCCCHHHHhcChhhhhcc
Confidence            99999999999999998754

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=2.1e-44  Score=341.50  Aligned_cols=289  Identities=27%  Similarity=0.436  Sum_probs=223.2

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec--
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--  116 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~--  116 (379)
                      ...|++.+.||+|+||.||+|.+..+|+.||+|++...   ......+.+|+.++..+     .|+|++++++++...  
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~   94 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV-----NHKNIISLLNVFTPQKS   94 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhC-----CCCCEeeeeeeeccCCC
Confidence            35688899999999999999999999999999998632   23345566788888887     789999999988654  


Q ss_pred             ----ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          117 ----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       117 ----~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                          ...|+||||++++|.+.+..    .++...+..++.|++.||.|||+.||+||||||+||++              
T Consensus        95 ~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~--------------  156 (359)
T cd07876          95 LEEFQDVYLVMELMDANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--------------  156 (359)
T ss_pred             ccccceeEEEEeCCCcCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE--------------
Confidence                35799999997788877643    47889999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                                   +.++.++|+|||.+.......  ....||+.|+|||.+.+..++.++|||||||++|+|++|+.||.
T Consensus       157 -------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~  223 (359)
T cd07876         157 -------------KSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQ  223 (359)
T ss_pred             -------------CCCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence                         455667888888776433222  23468999999999999899999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      +.+..+....+.+..+.++...+.........+.... ..++... ..+.......     ..........+..+++||.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~  296 (359)
T cd07876         224 GTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENR-PQYPGIS-FEELFPDWIF-----PSESERDKLKTSQARDLLS  296 (359)
T ss_pred             CCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhC-CCCCCcc-hhhhcccccc-----ccccccccccchhHHHHHH
Confidence            8888777778888888888887777666555554332 1111110 0010000000     0000112234678999999


Q ss_pred             hccccCCCCCcCHHHHhcCCCCC
Q 017021          351 GLLRYDPTDRLTAREALRHPFFT  373 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~hp~f~  373 (379)
                      +||+.||++|||++|+|+||||.
T Consensus       297 ~mL~~dP~~R~t~~e~l~hp~~~  319 (359)
T cd07876         297 KMLVIDPDKRISVDEALRHPYIT  319 (359)
T ss_pred             HHhccCcccCCCHHHHhcCchhh
Confidence            99999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-44  Score=336.95  Aligned_cols=243  Identities=31%  Similarity=0.498  Sum_probs=200.2

Q ss_pred             cccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC
Q 017021           51 MGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  126 (379)
Q Consensus        51 Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~  126 (379)
                      ||+|+||.||+|+++.+++.||+|+++..    .........|+.++.++     +|++++.+++.+..++..|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~   75 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-----NCPFIVPLKFSFQSPEKLYLVLAFI   75 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-----CCCcEeceeeEEecCCeEEEEEcCC
Confidence            69999999999999999999999998742    22334556688888777     7899999999999999999999999


Q ss_pred             -CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccC
Q 017021          127 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  205 (379)
Q Consensus       127 -~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (379)
                       +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++                           
T Consensus        76 ~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili---------------------------  126 (312)
T cd05585          76 NGGELFHHLQREG--RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL---------------------------  126 (312)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE---------------------------
Confidence             999999997754  68999999999999999999999999999999999999                           


Q ss_pred             CCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHH
Q 017021          206 PKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME  282 (379)
Q Consensus       206 ~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~  282 (379)
                      +.++.++|+|||.+......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+.
T Consensus       127 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~  206 (312)
T cd05585         127 DYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKIL  206 (312)
T ss_pred             CCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHH
Confidence            45566888888877642221   233568999999999999899999999999999999999999998765544333222


Q ss_pred             HHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCc-
Q 017021          283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL-  361 (379)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-  361 (379)
                      +....                       +                          ....+..+.++|.+||+.||.+|| 
T Consensus       207 ~~~~~-----------------------~--------------------------~~~~~~~~~~li~~~L~~dp~~R~~  237 (312)
T cd05585         207 QEPLR-----------------------F--------------------------PDGFDRDAKDLLIGLLSRDPTRRLG  237 (312)
T ss_pred             cCCCC-----------------------C--------------------------CCcCCHHHHHHHHHHcCCCHHHcCC
Confidence            11101                       1                          123567899999999999999997 


Q ss_pred             --CHHHHhcCCCCCCCC
Q 017021          362 --TAREALRHPFFTRDH  376 (379)
Q Consensus       362 --ta~e~l~hp~f~~~~  376 (379)
                        +|.|++.||||.+..
T Consensus       238 ~~~~~e~l~hp~~~~~~  254 (312)
T cd05585         238 YNGAQEIKNHPFFSQLS  254 (312)
T ss_pred             CCCHHHHHcCCCcCCCC
Confidence              589999999999754

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=1e-44  Score=338.92  Aligned_cols=251  Identities=25%  Similarity=0.360  Sum_probs=203.6

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|+||.||+|.++.+++.||+|++....    ........|..++..+    .++++++.+++++...+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~~~~i~~~~~~~~~~~~~   76 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALP----GKPPFLTQLHSCFQTMDRL   76 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhc----CCCCceeeeEEEEEcCCEE
Confidence            3788899999999999999999999999999997432    2234455566666555    2446788999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+.+....  .+++..+..++.||+.||.|||+.||+||||||+||++                    
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill--------------------  134 (324)
T cd05587          77 YFVMEYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML--------------------  134 (324)
T ss_pred             EEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE--------------------
Confidence            9999999 999999987754  58999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                             +.++.++|+|||++.....   ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..
T Consensus       135 -------~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~  207 (324)
T cd05587         135 -------DAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED  207 (324)
T ss_pred             -------cCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH
Confidence                   4556678888887653211   123356899999999999989999999999999999999999999876655


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.+.....|                                                 ...+.++.+++.+||+.
T Consensus       208 ~~~~~i~~~~~~~~-------------------------------------------------~~~~~~~~~li~~~l~~  238 (324)
T cd05587         208 ELFQSIMEHNVSYP-------------------------------------------------KSLSKEAVSICKGLLTK  238 (324)
T ss_pred             HHHHHHHcCCCCCC-------------------------------------------------CCCCHHHHHHHHHHhhc
Confidence            54443332211111                                                 13567889999999999


Q ss_pred             CCCCCcCH-----HHHhcCCCCCCCC
Q 017021          356 DPTDRLTA-----REALRHPFFTRDH  376 (379)
Q Consensus       356 dP~~Rpta-----~e~l~hp~f~~~~  376 (379)
                      ||.+|+++     +++++||||+..+
T Consensus       239 ~P~~R~~~~~~~~~~~~~hp~~~~~~  264 (324)
T cd05587         239 HPAKRLGCGPTGERDIREHAFFRRID  264 (324)
T ss_pred             CHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence            99999986     8999999998754

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=8.3e-45  Score=347.04  Aligned_cols=278  Identities=22%  Similarity=0.360  Sum_probs=210.5

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ....|++.+.||+|+||.||+|.+..+++.||+|...     .....+|+.++..+     .|+||+++++++..+...+
T Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~~~  159 (391)
T PHA03212         90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAI-----NHPSIIQLKGTFTYNKFTC  159 (391)
T ss_pred             ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhC-----CCCCCCCEeEEEEECCeeE
Confidence            3456999999999999999999999999999999764     23456799999988     7899999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +|+|+++++|..++....  .+++..++.++.||+.||.|||+.||+||||||+||++                      
T Consensus       160 lv~e~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll----------------------  215 (391)
T PHA03212        160 LILPRYKTDLYCYLAAKR--NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFI----------------------  215 (391)
T ss_pred             EEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEE----------------------
Confidence            999999889999887654  58999999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCcccccCCC----CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc---
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPD----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE---  273 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~---  273 (379)
                           +..+.++|+|||.+......    .....||+.|+|||++.+..++.++|||||||++|+|++|..||....   
T Consensus       216 -----~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~  290 (391)
T PHA03212        216 -----NHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLD  290 (391)
T ss_pred             -----cCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCccccc
Confidence                 45566788888877532211    123479999999999998889999999999999999999998875422   


Q ss_pred             ----hHHHHHHHHHHcCCCChhHHHhhhhhhhh----hhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          274 ----NLEHLAMMERVLGPLPQHMLKRVDRHAEK----YVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       274 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                          .......+.+..+..|.+...........    ..... ...+.            ..+...+     ....+.++
T Consensus       291 ~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------~~~~~~~-----~~~~~~~l  352 (391)
T PHA03212        291 GDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKS-SRKPG------------SRPLWTN-----LYELPIDL  352 (391)
T ss_pred             ccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhcc-CCCCC------------CCCCHHH-----HhhhhhhH
Confidence                22334445555565554321111111110    00000 00000            0000000     01245678


Q ss_pred             HHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          346 THLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      .+||.+||++||.+||||+|+|+||||.+.
T Consensus       353 ~~Li~~mL~~dP~~Rpta~elL~hp~f~~~  382 (391)
T PHA03212        353 EYLICKMLAFDAHHRPSAEALLDFAAFQDI  382 (391)
T ss_pred             HHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence            999999999999999999999999999874

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.5e-44  Score=338.95  Aligned_cols=279  Identities=27%  Similarity=0.489  Sum_probs=219.0

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec---
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---  116 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~---  116 (379)
                      ..|++.+.||+|+||.||+|.+..+++.||+|++....   .....+.+|+.++..+     .|+|++++++++...   
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   89 (343)
T cd07878          15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHM-----KHENVIGLLDVFTPATSI   89 (343)
T ss_pred             hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhc-----CCCchhhhhhhhcccccc
Confidence            46889999999999999999999999999999987432   2234556788888888     778999999887543   


Q ss_pred             ---ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          117 ---NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       117 ---~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                         ...|+++++++++|.+++...   .+++..+..++.||+.||.|||+.||+||||||+||++               
T Consensus        90 ~~~~~~~~~~~~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~---------------  151 (343)
T cd07878          90 ENFNEVYLVTNLMGADLNNIVKCQ---KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV---------------  151 (343)
T ss_pred             cccCcEEEEeecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE---------------
Confidence               457999999999999888653   49999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                  +.++.++|+|||.+...........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...
T Consensus       152 ------------~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  219 (343)
T cd07878         152 ------------NEDCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGN  219 (343)
T ss_pred             ------------CCCCCEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence                        45566788888887765555455678999999999876 46889999999999999999999999888


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhh-hhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      +..+....+.+..+..+......+.... ..+... ....+.                  ..........++.+.+||.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------------~~~~~~~~~~~~~~~~li~~  280 (343)
T cd07878         220 DYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQS-LPHMPQ------------------QDLKKIFRGANPLAIDLLEK  280 (343)
T ss_pred             CHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhc-cccccc------------------hhHHHhccCCCHHHHHHHHH
Confidence            7777777777777777666555433222 111111 000000                  00111222355678999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||+.||.+|||+.|+++||||...
T Consensus       281 mL~~dp~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         281 MLVLDSDKRISASEALAHPYFSQY  304 (343)
T ss_pred             HcCCChhhCCCHHHHhcCcchhcc
Confidence            999999999999999999999863

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-45  Score=335.35  Aligned_cols=252  Identities=26%  Similarity=0.455  Sum_probs=226.7

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      -|.+.+.||+|.|+.|-+|++..||++||||++.+.   ........+|+..+.-+     +|||||++++..+.+..+|
T Consensus        19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLV-----QHpNiVRLYEViDTQTKly   93 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLV-----QHPNIVRLYEVIDTQTKLY   93 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHh-----cCcCeeeeeehhcccceEE
Confidence            378889999999999999999999999999999753   23345667899988888     8899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +|+|+- +|+|.+++-++. ..+.+..+..++.||+.|+.|+|+..++||||||+|+.+.                    
T Consensus        94 LiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF--------------------  152 (864)
T KOG4717|consen   94 LILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF--------------------  152 (864)
T ss_pred             EEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe--------------------
Confidence            999999 899999998865 4699999999999999999999999999999999999985                    


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCC-CccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWT-YPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            .+-+.+||+|||++..+.+..  .+.+|+..|.|||++.+..|+ +++||||||||+|.|++|.+||+..++.|
T Consensus       153 ------EKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE  226 (864)
T KOG4717|consen  153 ------EKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE  226 (864)
T ss_pred             ------eecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh
Confidence                  466889999999998777655  567999999999999999998 88899999999999999999999999999


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ++-+|.......|+                                                 +.+.+.+|||..||+.|
T Consensus       227 TLTmImDCKYtvPs-------------------------------------------------hvS~eCrdLI~sMLvRd  257 (864)
T KOG4717|consen  227 TLTMIMDCKYTVPS-------------------------------------------------HVSKECRDLIQSMLVRD  257 (864)
T ss_pred             hhhhhhcccccCch-------------------------------------------------hhhHHHHHHHHHHHhcC
Confidence            88888776666654                                                 46789999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~~  376 (379)
                      |.+|.|.+++..|+|++...
T Consensus       258 PkkRAslEeI~s~~Wlq~~D  277 (864)
T KOG4717|consen  258 PKKRASLEEIVSTSWLQAGD  277 (864)
T ss_pred             chhhccHHHHhccccccCCC
Confidence            99999999999999998754

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=3e-44  Score=341.03  Aligned_cols=289  Identities=27%  Similarity=0.429  Sum_probs=224.4

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec--
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--  116 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~--  116 (379)
                      ...|++.+.||+|+||.||+|.+..+++.||+|++...   ........+|+.++..+     .|+|++.+++.+...  
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~ii~~~~~~~~~~~   97 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-----NHKNIIGLLNVFTPQKS   97 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhc-----CCCCccccceeeccccc
Confidence            34688899999999999999999999999999998642   23345566788888777     778999998877543  


Q ss_pred             ----ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          117 ----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       117 ----~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                          ..+|+||||++++|.+.+..    .++...+..++.|++.||.|||+.||+||||||+||++              
T Consensus        98 ~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll--------------  159 (364)
T cd07875          98 LEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--------------  159 (364)
T ss_pred             ccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE--------------
Confidence                46899999998888888754    37888999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                                   +.++.++|+|||.+.......  ....||..|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus       160 -------------~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~  226 (364)
T cd07875         160 -------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP  226 (364)
T ss_pred             -------------CCCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCC
Confidence                         455678888888876544322  23468999999999999899999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhh-hhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRES-IKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      +.+..+....+.+..+.++...++.+......+..+.. .....  ..+. .....     ...........+..+++||
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~dll  298 (364)
T cd07875         227 GTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRP-KYAGY--SFEKLFPDVL-----FPADSEHNKLKASQARDLL  298 (364)
T ss_pred             CCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCC-CcCCC--ChHhhCcccc-----ccccccccccccHHHHHHH
Confidence            98888888888888888877777777666655544321 11100  0000 00000     0000111223456899999


Q ss_pred             hhccccCCCCCcCHHHHhcCCCCCC
Q 017021          350 QGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      .+||+.||.+|||++|+|+||||..
T Consensus       299 ~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         299 SKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             HHhcCcCcccCCCHHHHhcCccccc
Confidence            9999999999999999999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-45  Score=332.83  Aligned_cols=258  Identities=26%  Similarity=0.388  Sum_probs=203.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccch---------------hhHhHHHHHHHHHHHHhcCCCCCeeEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---------------YREAAMIEIEVLQQLAKHDKGGNRCVQ  108 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---------------~~~~~~~e~~~l~~l~~~~~~~~~i~~  108 (379)
                      +|++.+.||+|.||.|-+|++..+++.||||++.+...               ..+...+|+.++.++     +|+|||+
T Consensus        98 qy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-----~H~nVV~  172 (576)
T KOG0585|consen   98 QYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-----HHPNVVK  172 (576)
T ss_pred             heehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-----CCcCeeE
Confidence            68999999999999999999999999999999964221               124667899999998     8899999


Q ss_pred             ecceeeec--ceEEEEEeCC-CCCHHHHHHhCCCCC-CCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccccc
Q 017021          109 IRNWFDYR--NHICIVFEKL-GSSLYDFLRKNNYRS-FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI  184 (379)
Q Consensus       109 ~~~~~~~~--~~~~lv~e~~-~~sL~~~l~~~~~~~-l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~  184 (379)
                      +++..++.  +.+|+|+||| .|.+.   .....+. +++.+++.++.+++.||+|||.+||+||||||+|+|++.+|.+
T Consensus       173 LiEvLDDP~s~~~YlVley~s~G~v~---w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~V  249 (576)
T KOG0585|consen  173 LIEVLDDPESDKLYLVLEYCSKGEVK---WCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTV  249 (576)
T ss_pred             EEEeecCcccCceEEEEEeccCCccc---cCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcE
Confidence            99999875  5799999999 66543   3333334 8999999999999999999999999999999999999555544


Q ss_pred             ccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC---CCC-CCccchHhHHHHHH
Q 017021          185 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG---LGW-TYPCDIWSVGCILV  260 (379)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~-~~~sDvwSlG~il~  260 (379)
                      ||+|||.+...+..++.      +             ....-...+|||.|+|||...+   ..+ +.+.||||+||+||
T Consensus       250 KIsDFGVs~~~~~~~~~------~-------------~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLY  310 (576)
T KOG0585|consen  250 KISDFGVSNEFPQGSDE------G-------------SDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLY  310 (576)
T ss_pred             EeeccceeeecccCCcc------c-------------cHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHH
Confidence            44444443322221100      0             0000023689999999999866   223 48899999999999


Q ss_pred             HHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc
Q 017021          261 ELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  340 (379)
Q Consensus       261 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (379)
                      +|+.|+.||-+....++...|....-.+|+.                                               +.
T Consensus       311 CllfG~~PF~~~~~~~l~~KIvn~pL~fP~~-----------------------------------------------pe  343 (576)
T KOG0585|consen  311 CLLFGQLPFFDDFELELFDKIVNDPLEFPEN-----------------------------------------------PE  343 (576)
T ss_pred             HhhhccCCcccchHHHHHHHHhcCcccCCCc-----------------------------------------------cc
Confidence            9999999999988888887776654444421                                               13


Q ss_pred             chhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       341 ~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ....++|||.+||++||++|++..++..|||..++
T Consensus       344 ~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  344 INEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             ccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence            56789999999999999999999999999999875

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.4e-45  Score=339.09  Aligned_cols=251  Identities=28%  Similarity=0.515  Sum_probs=225.7

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeec---cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce-
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH-  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~-  118 (379)
                      ..|.+++++|+|+||.+++++++..+..+|+|++.-   ....+..+.+|+.++.++     .||+|+.+.+.|..++. 
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~-----~hP~iv~y~ds~~~~~~~   78 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKL-----LHPNIVEYKDSFEEDGQL   78 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhc-----cCCCeeeeccchhcCCce
Confidence            368899999999999999999999999999999963   345566888999999998     78999999999999888 


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      ++|||+|| ||++.+.+..+.+..++++.+..|+.|++.||.|||+..|+|||||+.||++                   
T Consensus        79 l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifl-------------------  139 (426)
T KOG0589|consen   79 LCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFL-------------------  139 (426)
T ss_pred             EEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhc-------------------
Confidence            99999999 9999999988766689999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                              .++..++|.|||+|+..++..   .+.+||+.|++||++.+.+|+.++|||||||++|||++-+++|.+.+.
T Consensus       140 --------tk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m  211 (426)
T KOG0589|consen  140 --------TKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM  211 (426)
T ss_pred             --------cccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch
Confidence                    677778999999998777764   457899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHc-CCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          275 LEHLAMMERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       275 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ......+.+.. .|.|                                                 ..++.+++.+|..||
T Consensus       212 ~~Li~ki~~~~~~Plp-------------------------------------------------~~ys~el~~lv~~~l  242 (426)
T KOG0589|consen  212 SELILKINRGLYSPLP-------------------------------------------------SMYSSELRSLVKSML  242 (426)
T ss_pred             HHHHHHHhhccCCCCC-------------------------------------------------ccccHHHHHHHHHHh
Confidence            88887777755 3333                                                 247889999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      +.+|..||+|.++|.+|....
T Consensus       243 ~~~P~~RPsa~~LL~~P~l~~  263 (426)
T KOG0589|consen  243 RKNPEHRPSALELLRRPHLLR  263 (426)
T ss_pred             hcCCccCCCHHHHhhChhhhh
Confidence            999999999999999987653

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.6e-45  Score=309.28  Aligned_cols=255  Identities=24%  Similarity=0.430  Sum_probs=221.5

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      .....|.|.+.||+|-||.||+|+.+.++..||+|++.+.+    .......+|+++-..+     .||||.+++++|.+
T Consensus        19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L-----~hpnilrlY~~fhd   93 (281)
T KOG0580|consen   19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL-----RHPNILRLYGYFHD   93 (281)
T ss_pred             cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc-----CCccHHhhhhheec
Confidence            34456788999999999999999999999999999987432    1223344566665555     78999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      ...+|+++||+ +|++...+.....+.+++..+..++.|++.||.|+|..+++|||+||+|+|+                
T Consensus        94 ~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLl----------------  157 (281)
T KOG0580|consen   94 SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLL----------------  157 (281)
T ss_pred             cceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhcc----------------
Confidence            99999999999 8999999987666689999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCC-CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERP-DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                 ...+.++++|||.+..... ...+.+||..|.+||...+...+..+|+|++|++.||++.|.+||.+..
T Consensus       158 -----------g~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~  226 (281)
T KOG0580|consen  158 -----------GSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS  226 (281)
T ss_pred             -----------CCCCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh
Confidence                       6677889999998876543 3456799999999999999999999999999999999999999999988


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..++..+|.+..-..|+                                                 ..+..+.|+|.+||
T Consensus       227 ~~etYkrI~k~~~~~p~-------------------------------------------------~is~~a~dlI~~ll  257 (281)
T KOG0580|consen  227 HSETYKRIRKVDLKFPS-------------------------------------------------TISGGAADLISRLL  257 (281)
T ss_pred             hHHHHHHHHHccccCCc-------------------------------------------------ccChhHHHHHHHHh
Confidence            88888887776554442                                                 46789999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ..+|.+|.+..|++.|||+...
T Consensus       258 ~~~p~~r~~l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  258 VKNPIERLALTEVMDHPWIVAN  279 (281)
T ss_pred             ccCccccccHHHHhhhHHHHhc
Confidence            9999999999999999998753

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=2.5e-44  Score=335.63  Aligned_cols=245  Identities=26%  Similarity=0.397  Sum_probs=199.2

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.||+|+||.||+|+++.+++.||+|+++...    ........|..++..+    ..|++++.+++++...+.+|+|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~h~~iv~~~~~~~~~~~~~iv~E   76 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLA----RNHPFLTQLYCCFQTPDRLFFVME   76 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc----cCCCchhceeeEEEcCCEEEEEEc
Confidence            46899999999999999999999999987432    2233444566665544    367999999999999999999999


Q ss_pred             CC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          125 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                      |+ +++|.+.+....  .+++..+..++.|++.||.|||+.|++||||||+||++                         
T Consensus        77 y~~~g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli-------------------------  129 (320)
T cd05590          77 FVNGGDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL-------------------------  129 (320)
T ss_pred             CCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE-------------------------
Confidence            99 899999887754  68999999999999999999999999999999999999                         


Q ss_pred             cCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          204 RMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                        +.++.++|+|||.+.....   ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+....
T Consensus       130 --~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~  207 (320)
T cd05590         130 --DHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA  207 (320)
T ss_pred             --CCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHH
Confidence              4555677888887654221   12335689999999999988899999999999999999999999987766555443


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      +.+.....|                                                 ...+.++.++|.+||+.||.+|
T Consensus       208 i~~~~~~~~-------------------------------------------------~~~~~~~~~li~~~L~~dP~~R  238 (320)
T cd05590         208 ILNDEVVYP-------------------------------------------------TWLSQDAVDILKAFMTKNPTMR  238 (320)
T ss_pred             HhcCCCCCC-------------------------------------------------CCCCHHHHHHHHHHcccCHHHC
Confidence            332111111                                                 1245788999999999999999


Q ss_pred             cCH------HHHhcCCCCCCC
Q 017021          361 LTA------REALRHPFFTRD  375 (379)
Q Consensus       361 pta------~e~l~hp~f~~~  375 (379)
                      |++      +++++||||+..
T Consensus       239 ~~~~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         239 LGSLTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             CCCCCCCCHHHHHcCCCcCCC
Confidence            998      999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.8e-47  Score=341.36  Aligned_cols=252  Identities=27%  Similarity=0.400  Sum_probs=210.4

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ....|...+.||+|.||.||+|.+..|++.||+|++...  ......+.+|+.++.+.     .+++|..+++.+-.+..
T Consensus        11 ~~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~-----~~~~it~yygsyl~g~~   85 (467)
T KOG0201|consen   11 PELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQC-----DSPNITEYYGSYLKGTK   85 (467)
T ss_pred             cccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhc-----CcchHHhhhhheeeccc
Confidence            344566779999999999999999999999999999742  33446677899999888     66899999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      ++++|||| ||++.+.+....  .+.+..+..++.+++.||.|||+++.+|||||+.||++                   
T Consensus        86 LwiiMey~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~-------------------  144 (467)
T KOG0201|consen   86 LWIIMEYCGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILL-------------------  144 (467)
T ss_pred             HHHHHHHhcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhcceecccccccceeE-------------------
Confidence            99999999 999999998865  55888999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                              ...+.++|+|||.+......   ..+++||+.|||||++.+..|+.++||||||++.+||++|.+|+....+
T Consensus       145 --------s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP  216 (467)
T KOG0201|consen  145 --------SESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP  216 (467)
T ss_pred             --------eccCcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc
Confidence                    44567888888877543332   2567899999999999998999999999999999999999999976554


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      ......|-+   ..                                             ...+...+++.+++||..||+
T Consensus       217 mrvlflIpk---~~---------------------------------------------PP~L~~~~S~~~kEFV~~CL~  248 (467)
T KOG0201|consen  217 MRVLFLIPK---SA---------------------------------------------PPRLDGDFSPPFKEFVEACLD  248 (467)
T ss_pred             ceEEEeccC---CC---------------------------------------------CCccccccCHHHHHHHHHHhh
Confidence            222111111   00                                             111223578899999999999


Q ss_pred             cCCCCCcCHHHHhcCCCCCC
Q 017021          355 YDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f~~  374 (379)
                      +||+.||||.++|+|+|++.
T Consensus       249 k~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  249 KNPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             cCcccCcCHHHHhhhHHHHh
Confidence            99999999999999999986

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=3.9e-44  Score=334.80  Aligned_cols=251  Identities=25%  Similarity=0.346  Sum_probs=202.8

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccch----hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|+||.||+|+++.+++.||+|+++....    .......|..++...    .+|++++.+++++...+..
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~~~~i~~~~~~~~~~~~~   76 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALS----GKPPFLTQLHSCFQTMDRL   76 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhc----cCCCeEeeEEEEEecCCEE
Confidence            36788999999999999999999999999999974321    122334455554443    3578899999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+.+....  .+++..+..++.||+.||.|||+.||+||||||+||++                    
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill--------------------  134 (323)
T cd05616          77 YFVMEYVNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML--------------------  134 (323)
T ss_pred             EEEEcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE--------------------
Confidence            9999999 899999987754  58999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                             +.++.++|+|||.+.....   ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..
T Consensus       135 -------~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~  207 (323)
T cd05616         135 -------DSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED  207 (323)
T ss_pred             -------CCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH
Confidence                   4556678888887754321   123356899999999999999999999999999999999999999877665


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.......|                                                 ...+.++.+++.+||+.
T Consensus       208 ~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~~l~~  238 (323)
T cd05616         208 ELFQSIMEHNVAYP-------------------------------------------------KSMSKEAVAICKGLMTK  238 (323)
T ss_pred             HHHHHHHhCCCCCC-------------------------------------------------CcCCHHHHHHHHHHccc
Confidence            55544433221111                                                 13567899999999999


Q ss_pred             CCCCCcC-----HHHHhcCCCCCCCC
Q 017021          356 DPTDRLT-----AREALRHPFFTRDH  376 (379)
Q Consensus       356 dP~~Rpt-----a~e~l~hp~f~~~~  376 (379)
                      ||++|++     ..++++||||+...
T Consensus       239 ~p~~R~~~~~~~~~~i~~h~~~~~~~  264 (323)
T cd05616         239 HPGKRLGCGPEGERDIKEHAFFRYID  264 (323)
T ss_pred             CHHhcCCCCCCCHHHHhcCCCcCCCC
Confidence            9999998     48999999998643

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=3e-44  Score=340.83  Aligned_cols=280  Identities=22%  Similarity=0.278  Sum_probs=205.8

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|+||+||+|.++.+++.||+|++....    .....+..|+.++..+     +|++++++++.+.+...+
T Consensus         2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-----~~~~iv~~~~~~~~~~~~   76 (363)
T cd05628           2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA-----DSLWVVKMFYSFQDKLNL   76 (363)
T ss_pred             CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-----CCCCcceEEEEEecCCeE
Confidence            4788899999999999999999999999999997432    2234455677777776     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++....  .+++..+..++.|++.||+|||+.||+||||||+||+++.++.++++|||++......
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~  154 (363)
T cd05628          77 YLIMEFLPGGDMMTLLMKKD--TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA  154 (363)
T ss_pred             EEEEcCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence            9999999 999999998764  6899999999999999999999999999999999999988777778888776533211


Q ss_pred             CcccccCCCCCCeEEeecCcccc-----c-------CCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCC
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTY-----E-------RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~-----~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~  266 (379)
                      ...... .........|+.....     .       .......+||+.|+|||++.+..++.++|||||||++|+|++|.
T Consensus       155 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~  233 (363)
T cd05628         155 HRTEFY-RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY  233 (363)
T ss_pred             cccccc-ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence            100000 0000000011110000     0       00012347999999999999989999999999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||.+.+..+....+.......                     .+|+                        ....+++++
T Consensus       234 ~Pf~~~~~~~~~~~i~~~~~~~---------------------~~p~------------------------~~~~s~~~~  268 (363)
T cd05628         234 PPFCSETPQETYKKVMNWKETL---------------------IFPP------------------------EVPISEKAK  268 (363)
T ss_pred             CCCCCCCHHHHHHHHHcCcCcc---------------------cCCC------------------------cCCCCHHHH
Confidence            9998776655544443211110                     0110                        012567889


Q ss_pred             HHHhhccc--cCCCCCcCHHHHhcCCCCCCCC
Q 017021          347 HLLQGLLR--YDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       347 ~li~~~L~--~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ++|.+|+.  .++..||+++|+++||||++..
T Consensus       269 ~li~~l~~~~~~r~~r~~~~ei~~hp~f~~~~  300 (363)
T cd05628         269 DLILRFCCEWEHRIGAPGVEEIKTNPFFEGVD  300 (363)
T ss_pred             HHHHHHcCChhhcCCCCCHHHHhCCCCCCCCC
Confidence            99998665  2334568999999999998764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=3.1e-44  Score=336.10  Aligned_cols=245  Identities=27%  Similarity=0.443  Sum_probs=199.9

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.||+|+||.||+++++.+++.||+|++....    ........|+.++..+     .|++++.+.+.+...+..|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~E   75 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-----RHPFLTSLKYSFQTKDRLCFVME   75 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-----CCCCCcceEEEEEcCCEEEEEEe
Confidence            36899999999999999999999999997432    2234556677777776     77999999999999999999999


Q ss_pred             CC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          125 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                      |+ +++|.+.+....  .+++..+..++.||+.||+|||+.||+||||||+||++                         
T Consensus        76 y~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll-------------------------  128 (328)
T cd05593          76 YVNGGELFFHLSRER--VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML-------------------------  128 (328)
T ss_pred             CCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE-------------------------
Confidence            99 899998887654  68999999999999999999999999999999999999                         


Q ss_pred             cCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          204 RMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                        +.++.++|+|||.+......   .....||+.|+|||.+.+..++.++|||||||++|+|++|+.||...+..+....
T Consensus       129 --~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~  206 (328)
T cd05593         129 --DKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL  206 (328)
T ss_pred             --CCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHH
Confidence              45566788888877542221   1234689999999999988899999999999999999999999987655443322


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      +......                       +                          ....+.++.++|++||+.||++|
T Consensus       207 ~~~~~~~-----------------------~--------------------------p~~~~~~~~~li~~~L~~dP~~R  237 (328)
T cd05593         207 ILMEDIK-----------------------F--------------------------PRTLSADAKSLLSGLLIKDPNKR  237 (328)
T ss_pred             hccCCcc-----------------------C--------------------------CCCCCHHHHHHHHHHcCCCHHHc
Confidence            2111111                       1                          12356789999999999999999


Q ss_pred             c-----CHHHHhcCCCCCCCC
Q 017021          361 L-----TAREALRHPFFTRDH  376 (379)
Q Consensus       361 p-----ta~e~l~hp~f~~~~  376 (379)
                      +     ++.|+++||||....
T Consensus       238 ~~~~~~~~~~il~h~~~~~~~  258 (328)
T cd05593         238 LGGGPDDAKEIMRHSFFTGVN  258 (328)
T ss_pred             CCCCCCCHHHHhcCCCcCCCC
Confidence            7     899999999998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=4.3e-44  Score=333.39  Aligned_cols=246  Identities=27%  Similarity=0.419  Sum_probs=196.9

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.||+|+||.||+|+++.+|+.||+|+++...    ........|..++...    .+|++++++++.+.+.+++|+|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~~~~i~~~~~~~~~~~~~~lv~E   76 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALA----WENPFLTHLYCTFQTKEHLFFVME   76 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc----cCCCCccCeeEEEEeCCEEEEEEC
Confidence            46899999999999999999999999997432    2223344455555433    367899999999999999999999


Q ss_pred             CC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          125 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                      |+ +++|.+.+....  .+++..+..++.|++.||+|||+.|++||||||+||++                         
T Consensus        77 ~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~-------------------------  129 (316)
T cd05620          77 FLNGGDLMFHIQDKG--RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML-------------------------  129 (316)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE-------------------------
Confidence            99 899999987754  68999999999999999999999999999999999999                         


Q ss_pred             cCCCCCCeEEeecCcccccC---CCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          204 RMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                        +.++.++|+|||.+....   .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....
T Consensus       130 --~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~  207 (316)
T cd05620         130 --DRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFES  207 (316)
T ss_pred             --CCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence              445567777777665321   112345689999999999998999999999999999999999999987665544433


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      +.......|                                                 ...+.+++++|++||+.||++|
T Consensus       208 ~~~~~~~~~-------------------------------------------------~~~~~~~~~li~~~l~~dP~~R  238 (316)
T cd05620         208 IRVDTPHYP-------------------------------------------------RWITKESKDILEKLFERDPTRR  238 (316)
T ss_pred             HHhCCCCCC-------------------------------------------------CCCCHHHHHHHHHHccCCHHHc
Confidence            322111111                                                 1245688999999999999999


Q ss_pred             cCH-HHHhcCCCCCCCC
Q 017021          361 LTA-REALRHPFFTRDH  376 (379)
Q Consensus       361 pta-~e~l~hp~f~~~~  376 (379)
                      |++ +++++||||+...
T Consensus       239 ~~~~~~~~~h~~f~~~~  255 (316)
T cd05620         239 LGVVGNIRGHPFFKTIN  255 (316)
T ss_pred             CCChHHHHcCCCcCCCC
Confidence            998 5888999998754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=5.3e-44  Score=338.24  Aligned_cols=288  Identities=26%  Similarity=0.423  Sum_probs=221.2

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec---
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---  116 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~---  116 (379)
                      ..|++.+.||+|+||.||+|.+..+++.||+|++...   ........+|+.++..+     .|+|++.+++.+...   
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~   91 (355)
T cd07874          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-----NHKNIISLLNVFTPQKSL   91 (355)
T ss_pred             hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHh-----CCCchhceeeeeeccccc
Confidence            4678889999999999999999999999999998642   22345566788888887     779999999887643   


Q ss_pred             ---ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          117 ---NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       117 ---~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                         ...|+||||+.+++.+.+..    .++...+..++.|++.||.|||+.|++||||||+||++               
T Consensus        92 ~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill---------------  152 (355)
T cd07874          92 EEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---------------  152 (355)
T ss_pred             cccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---------------
Confidence               35799999997788887754    47889999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                  +.++.++|+|||.+.......  ....||..|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus       153 ------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  220 (355)
T cd07874         153 ------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG  220 (355)
T ss_pred             ------------CCCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                        455668888888876543322  334689999999999998899999999999999999999999998


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .+..+....+.+..+.+..+.+..+......+..+.. .+..... ......     .............+..+++||.+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~li~~  293 (355)
T cd07874         221 RDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRP-KYAGLTF-PKLFPD-----SLFPADSEHNKLKASQARDLLSK  293 (355)
T ss_pred             CCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCC-ccccccc-hhhccc-----cccccccccccccchHHHHHHHH
Confidence            8877777777777777777777766655555443321 1110000 000000     00000011122345678999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFT  373 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~  373 (379)
                      ||+.||++|||+.|+|+||||.
T Consensus       294 mL~~dP~~Rps~~ell~hp~~~  315 (355)
T cd07874         294 MLVIDPAKRISVDEALQHPYIN  315 (355)
T ss_pred             HhcCCchhcCCHHHHhcCcchh
Confidence            9999999999999999999996

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-44  Score=340.93  Aligned_cols=280  Identities=26%  Similarity=0.394  Sum_probs=208.3

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|+||.||+|++..+++.||+|+++...    .....+..|..++..+     .|++++++++.+.++++.
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~   76 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-----DSPWIVKLYYSFQDEEHL   76 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-----CCCCccchhhheecCCeE
Confidence            4788999999999999999999999999999997432    2334566788888777     689999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++....  .+++..+..++.||+.||+|||+.|++||||||+||+++.++.+++.|||++......
T Consensus        77 ~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  154 (350)
T cd05573          77 YLVMEYMPGGDLMNLLIRKD--VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA  154 (350)
T ss_pred             EEEEcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence            9999999 899999998763  6899999999999999999999999999999999999977777777777665433222


Q ss_pred             CcccccCCCCCC-eEEeec----CcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          199 SSYFKRMPKSSA-IKVIDF----GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       199 ~~~~~~~~~~~~-~~l~Df----g~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                      ............ ......    ..............||+.|+|||++.+..++.++|||||||++|+|++|+.||...+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~  234 (350)
T cd05573         155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT  234 (350)
T ss_pred             CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence            100000000000 000000    000000001123468999999999999899999999999999999999999998766


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.......                     ..|.                        ....++++.++|.+||
T Consensus       235 ~~~~~~~i~~~~~~~---------------------~~p~------------------------~~~~~~~~~~li~~ll  269 (350)
T cd05573         235 LQETYNKIINWKESL---------------------RFPP------------------------DPPVSPEAIDLICRLL  269 (350)
T ss_pred             HHHHHHHHhccCCcc---------------------cCCC------------------------CCCCCHHHHHHHHHHc
Confidence            554443333211110                     0000                        0124678999999999


Q ss_pred             ccCCCCCcC-HHHHhcCCCCCCCC
Q 017021          354 RYDPTDRLT-AREALRHPFFTRDH  376 (379)
Q Consensus       354 ~~dP~~Rpt-a~e~l~hp~f~~~~  376 (379)
                      + ||.+||+ ++|+++||||+...
T Consensus       270 ~-dp~~R~~s~~~ll~hp~~~~~~  292 (350)
T cd05573         270 C-DPEDRLGSFEEIKSHPFFKGID  292 (350)
T ss_pred             c-ChhhcCCCHHHHhcCCCcCCCC
Confidence            8 9999999 99999999998753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=3.1e-44  Score=335.43  Aligned_cols=245  Identities=25%  Similarity=0.419  Sum_probs=199.4

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.||+|+||.||+++++.+|+.||+|++....    ........|+.++..+     .|++++.+++.+...+..|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~i~~~~~~~~~~~~~~lv~E   75 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-----RHPFLTALKYAFQTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-----CCCCCcceeeEEecCCEEEEEEe
Confidence            46899999999999999999999999997431    2233445677777777     77999999999999999999999


Q ss_pred             CC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          125 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                      |+ +++|...+....  .+++..+..++.||+.||.|||+.|++||||||+||+++                        
T Consensus        76 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~------------------------  129 (323)
T cd05595          76 YANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD------------------------  129 (323)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEc------------------------
Confidence            99 899998887654  689999999999999999999999999999999999994                        


Q ss_pred             cCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          204 RMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                         .++.++|+|||.+......   .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+....
T Consensus       130 ---~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~  206 (323)
T cd05595         130 ---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL  206 (323)
T ss_pred             ---CCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence               4556777777766532211   1234689999999999888899999999999999999999999987655444332


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      +.......                                                 ....++++.++|.+||+.||++|
T Consensus       207 ~~~~~~~~-------------------------------------------------p~~~~~~~~~li~~~L~~dP~~R  237 (323)
T cd05595         207 ILMEEIRF-------------------------------------------------PRTLSPEAKSLLAGLLKKDPKQR  237 (323)
T ss_pred             HhcCCCCC-------------------------------------------------CCCCCHHHHHHHHHHccCCHHHh
Confidence            22111111                                                 12356789999999999999999


Q ss_pred             c-----CHHHHhcCCCCCCCC
Q 017021          361 L-----TAREALRHPFFTRDH  376 (379)
Q Consensus       361 p-----ta~e~l~hp~f~~~~  376 (379)
                      +     ++.++++||||...+
T Consensus       238 ~~~~~~~~~~~l~h~~~~~~~  258 (323)
T cd05595         238 LGGGPSDAKEVMEHRFFLSIN  258 (323)
T ss_pred             CCCCCCCHHHHHcCCCcCCCC
Confidence            8     899999999998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=4.5e-44  Score=334.51  Aligned_cols=251  Identities=24%  Similarity=0.377  Sum_probs=201.7

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      |++.+.||+|+||.||+|.++.+++.||+|+++...    ........|..++..+..  ..|+|++++++++...+..|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~--l~hp~i~~~~~~~~~~~~~~   78 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANS--ERHPFLVNLFACFQTEDHVC   78 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccc--cCCCChhceeeEEEcCCEEE
Confidence            678899999999999999999999999999997432    122344455555544322  36899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|...+...   .+++..+..++.||+.||.|||+.|++||||||+||++                     
T Consensus        79 lv~E~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill---------------------  134 (324)
T cd05589          79 FVMEYAAGGDLMMHIHTD---VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL---------------------  134 (324)
T ss_pred             EEEcCCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---------------------
Confidence            999999 89998887653   58999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            +.++.++|+|||.+.....   ......||+.|+|||.+.+..++.++|||||||++|+|++|+.||.+.+..+
T Consensus       135 ------~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~  208 (324)
T cd05589         135 ------DTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE  208 (324)
T ss_pred             ------CCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH
Confidence                  4555677777777653221   1234568999999999999889999999999999999999999998766554


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.......|                                                 ...+..+.++|.+||+.|
T Consensus       209 ~~~~i~~~~~~~p-------------------------------------------------~~~~~~~~~li~~~L~~d  239 (324)
T cd05589         209 VFDSIVNDEVRYP-------------------------------------------------RFLSREAISIMRRLLRRN  239 (324)
T ss_pred             HHHHHHhCCCCCC-------------------------------------------------CCCCHHHHHHHHHHhhcC
Confidence            4433322111111                                                 135678899999999999


Q ss_pred             CCCCc-----CHHHHhcCCCCCCCC
Q 017021          357 PTDRL-----TAREALRHPFFTRDH  376 (379)
Q Consensus       357 P~~Rp-----ta~e~l~hp~f~~~~  376 (379)
                      |++||     ++.++++||||+..+
T Consensus       240 P~~R~~~~~~~~~~l~~~~~f~~~~  264 (324)
T cd05589         240 PERRLGSGEKDAEDVKKQPFFRDIN  264 (324)
T ss_pred             HhHcCCCCCCCHHHHhhCCCcCCCC
Confidence            99999     799999999998754

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=8.6e-44  Score=333.59  Aligned_cols=299  Identities=22%  Similarity=0.326  Sum_probs=211.4

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ..-.|++.++||+|+||.||++.++.++..||+|++...  ......+.+|++++..+     +|+|++++++++..++.
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~   77 (331)
T cd06649           3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-----NSPYIVGFYGAFYSDGE   77 (331)
T ss_pred             CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-----CCCCCCeEEEEEEECCE
Confidence            345688999999999999999999999999999998743  23345677889988888     78999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      .++||||+ +++|.+++....  .+++..+..++.|++.||.|||+. +++||||||+||+++                 
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~-----------------  138 (331)
T cd06649          78 ISICMEHMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN-----------------  138 (331)
T ss_pred             EEEEeecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEc-----------------
Confidence            99999999 899999997754  589999999999999999999986 699999999999994                 


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCC-CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                                .++.++|+|||.+...... .....||..|+|||++.+..++.++|||||||++|+|++|+.||...+..
T Consensus       139 ----------~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~  208 (331)
T cd06649         139 ----------SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK  208 (331)
T ss_pred             ----------CCCcEEEccCcccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                      4455777777776533222 23356899999999999888999999999999999999999999876654


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhh----hhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHA----EKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      +....+...................    ......+....+. ....+........+.    .......++.++.+||.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~  283 (331)
T cd06649         209 ELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPA-MAIFELLDYIVNEPP----PKLPNGVFTPDFQEFVNK  283 (331)
T ss_pred             HHHHHhcccccccccCCccccCcccccccccccccccccccc-hhHHHHHHHHHhCCC----cCCCCccccHHHHHHHHH
Confidence            4332221111000000000000000    0000000000000 000000000000000    000012356789999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCCCcC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRDHLR  378 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~~~~  378 (379)
                      ||++||++|||++|+++||||+....+
T Consensus       284 ~L~~~P~~Rpt~~ell~h~~~~~~~~~  310 (331)
T cd06649         284 CLIKNPAERADLKMLMNHTFIKRSEVE  310 (331)
T ss_pred             HccCCcccCCCHHHHhcChHHhhcccc
Confidence            999999999999999999999876543

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=4.7e-44  Score=333.18  Aligned_cols=246  Identities=27%  Similarity=0.388  Sum_probs=197.2

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.||+|+||.||+|++..+++.||+|+++...    ........|..++...    .+|++++++++.+..++..|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~hp~i~~~~~~~~~~~~~~lv~e   76 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALA----WEHPFLTHLFCTFQTKEHLFFVME   76 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhc----cCCCCccceeeEEEcCCEEEEEEc
Confidence            46899999999999999999999999997432    1222333444444332    378999999999999999999999


Q ss_pred             CC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          125 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                      |+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++                         
T Consensus        77 ~~~gg~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill-------------------------  129 (316)
T cd05592          77 YLNGGDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL-------------------------  129 (316)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE-------------------------
Confidence            99 999999987754  68999999999999999999999999999999999999                         


Q ss_pred             cCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          204 RMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                        +.++.++|+|||.+.....   ......||+.|+|||.+.+..++.++|||||||++|+|++|+.||.+.+..+....
T Consensus       130 --~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~  207 (316)
T cd05592         130 --DKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDS  207 (316)
T ss_pred             --CCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence              4556678888887754221   12345789999999999988899999999999999999999999987766554433


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      +.......                                                 ....+.++.++|.+||+.||++|
T Consensus       208 i~~~~~~~-------------------------------------------------~~~~~~~~~~ll~~~l~~~P~~R  238 (316)
T cd05592         208 ILNDRPHF-------------------------------------------------PRWISKEAKDCLSKLFERDPTKR  238 (316)
T ss_pred             HHcCCCCC-------------------------------------------------CCCCCHHHHHHHHHHccCCHHHc
Confidence            32211111                                                 11355688999999999999999


Q ss_pred             cCH-HHHhcCCCCCCCC
Q 017021          361 LTA-REALRHPFFTRDH  376 (379)
Q Consensus       361 pta-~e~l~hp~f~~~~  376 (379)
                      |++ .+++.||||...+
T Consensus       239 ~~~~~~l~~h~~~~~~~  255 (316)
T cd05592         239 LGVDGDIRQHPFFRGID  255 (316)
T ss_pred             CCChHHHHcCcccCCCC
Confidence            986 5888999998754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=6.9e-44  Score=332.84  Aligned_cols=245  Identities=22%  Similarity=0.359  Sum_probs=199.5

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.||+|+||.||+|+++.+++.||+|+++...    ........|..++..+    .+|++++.+++.+..++..|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~----~~hp~i~~~~~~~~~~~~~~lv~E   76 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALA----AKHPFLTALHCCFQTKDRLFFVME   76 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhc----cCCCCccceeeEEEcCCeEEEEEe
Confidence            46899999999999999999999999997432    2223445566665543    367899999999999999999999


Q ss_pred             CC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          125 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                      |+ +++|...+....  .+++..+..++.||+.||.|||+.|++||||||+||++                         
T Consensus        77 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill-------------------------  129 (321)
T cd05591          77 YVNGGDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL-------------------------  129 (321)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE-------------------------
Confidence            99 899998887654  68999999999999999999999999999999999999                         


Q ss_pred             cCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          204 RMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                        +.++.++|+|||.+......   .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+....
T Consensus       130 --~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~  207 (321)
T cd05591         130 --DAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFES  207 (321)
T ss_pred             --CCCCCEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHH
Confidence              45567888888877542221   2334689999999999988999999999999999999999999988766555443


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      +.......|                                                 ...+.++.++|.+||+.||++|
T Consensus       208 i~~~~~~~p-------------------------------------------------~~~~~~~~~ll~~~L~~dp~~R  238 (321)
T cd05591         208 ILHDDVLYP-------------------------------------------------VWLSKEAVSILKAFMTKNPNKR  238 (321)
T ss_pred             HHcCCCCCC-------------------------------------------------CCCCHHHHHHHHHHhccCHHHc
Confidence            322111111                                                 1245688999999999999999


Q ss_pred             c-------CHHHHhcCCCCCCC
Q 017021          361 L-------TAREALRHPFFTRD  375 (379)
Q Consensus       361 p-------ta~e~l~hp~f~~~  375 (379)
                      |       +++++++||||...
T Consensus       239 ~~~~~~~~~~~~~~~hp~~~~~  260 (321)
T cd05591         239 LGCVASQGGEDAIKQHPFFKEI  260 (321)
T ss_pred             CCCCCCCCCHHHHhcCCccCCC
Confidence            9       99999999999764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=1.5e-43  Score=329.97  Aligned_cols=285  Identities=26%  Similarity=0.474  Sum_probs=207.9

Q ss_pred             hhccccccceeEEEEEec--CCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee--cceEEEEE
Q 017021           48 HSKMGEGTFGQVLECWDR--ERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--RNHICIVF  123 (379)
Q Consensus        48 ~~~Lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~--~~~~~lv~  123 (379)
                      ..+||+|+||.||+|+++  .+++.||+|.+... .......+|+.++..+     .|+|++++++.+..  +..+|++|
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~lv~   79 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT-GISMSACREIALLREL-----KHPNVISLQKVFLSHADRKVWLLF   79 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCC-CCcHHHHHHHHHHHhc-----CCCCCcceeeeEecCCCcEEEEEE
Confidence            368999999999999965  46789999998743 3345567899999888     78999999998854  56789999


Q ss_pred             eCCCCCHHHHHHhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          124 EKLGSSLYDFLRKNN-------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       124 e~~~~sL~~~l~~~~-------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ||++++|.+++....       ...+++..+..++.||+.||.|||+.||+||||||+||++....              
T Consensus        80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~--------------  145 (317)
T cd07868          80 DYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG--------------  145 (317)
T ss_pred             eccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCC--------------
Confidence            999889998886421       12488999999999999999999999999999999999995321              


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCC
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                               +..+.++|+|||.+.......      ....||+.|+|||++.+. .++.++||||+||++|+|++|++||
T Consensus       146 ---------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f  216 (317)
T cd07868         146 ---------PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF  216 (317)
T ss_pred             ---------CCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCc
Confidence                     345678999999886543321      235689999999998764 5889999999999999999999999


Q ss_pred             CCCch---------HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc
Q 017021          270 QTHEN---------LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  340 (379)
Q Consensus       270 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (379)
                      .+...         ......+.+..+.++...|+..................           .................
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~  285 (317)
T cd07868         217 HCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN-----------TYTNCSLIKYMEKHKVK  285 (317)
T ss_pred             cCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhcc-----------ccCcccccchHHhcCCC
Confidence            75432         24445566667777766665543221110000000000           00000000111111223


Q ss_pred             chhHHHHHHhhccccCCCCCcCHHHHhcCCCC
Q 017021          341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       341 ~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      .+..+.+||.+||++||.+||||+|+|+||||
T Consensus       286 ~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         286 PDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             CChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            45678999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=4.7e-44  Score=341.64  Aligned_cols=281  Identities=24%  Similarity=0.354  Sum_probs=207.4

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|+++++||+|+||+||+|+++.+++.||+|++....    .....+..|+.++..+     .|++++++++.+.+.+.+
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-----~h~~iv~l~~~~~~~~~~   76 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-----DNEWVVKLYYSFQDKDNL   76 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-----CCCCeeeeEEEEecCCEE
Confidence            4778899999999999999999999999999997432    2334566788888777     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++....  .+++..+..++.||+.||+|||+.||+||||||+||+++.++.++++|||++......
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~  154 (381)
T cd05626          77 YFVMDYIPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT  154 (381)
T ss_pred             EEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence            9999999 999999997754  6899999999999999999999999999999999999988888888888876432110


Q ss_pred             --Cccccc------CCC-----CCCeEEeecCccc-------cc---CCCCCcccccCCccchhhhhCCCCCCccchHhH
Q 017021          199 --SSYFKR------MPK-----SSAIKVIDFGSTT-------YE---RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSV  255 (379)
Q Consensus       199 --~~~~~~------~~~-----~~~~~l~Dfg~~~-------~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSl  255 (379)
                        ......      ...     ......+.++...       ..   ........||+.|+|||++.+..++.++|||||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl  234 (381)
T cd05626         155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV  234 (381)
T ss_pred             cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence              000000      000     0000001111000       00   000123579999999999998889999999999


Q ss_pred             HHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHH
Q 017021          256 GCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM  335 (379)
Q Consensus       256 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (379)
                      ||++|+|++|..||...+..+....+.......                     .++.                      
T Consensus       235 G~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------------------~~~~----------------------  271 (381)
T cd05626         235 GVILFEMLVGQPPFLAPTPTETQLKVINWENTL---------------------HIPP----------------------  271 (381)
T ss_pred             hhHHHHHHhCCCCCcCCCHHHHHHHHHcccccc---------------------CCCC----------------------
Confidence            999999999999998766544433322111100                     0110                      


Q ss_pred             HhhccchhHHHHHHhhcc--ccCCCCCcCHHHHhcCCCCCCCC
Q 017021          336 QHVDHSAGDLTHLLQGLL--RYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       336 ~~~~~~~~~~~~li~~~L--~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                        ....++++.+||.+|+  ..+|..|++++|+++||||++..
T Consensus       272 --~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~  312 (381)
T cd05626         272 --QVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVD  312 (381)
T ss_pred             --CCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCCC
Confidence              1135678999999855  55666699999999999998743

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.1e-44  Score=340.93  Aligned_cols=280  Identities=25%  Similarity=0.368  Sum_probs=208.9

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|+||.||+|++..+++.||+|++....    .....+..|+.++..+     +|++++.+++.+.++.+.
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-----~h~~iv~~~~~~~~~~~~   76 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-----DNPWVVKLYYSFQDENYL   76 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-----CCCCCcceEEEEEcCCeE
Confidence            4788899999999999999999999999999997432    2234455688888877     689999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++....  .+++..+..++.||+.||+|||+.||+||||||+||+++.++.++++|||++......
T Consensus        77 ~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  154 (364)
T cd05599          77 YLIMEYLPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS  154 (364)
T ss_pred             EEEECCCCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence            9999999 899999997754  6899999999999999999999999999999999999988888888888877543221


Q ss_pred             Cccc--ccCCCCCCeEEeecCccccc------------CCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh
Q 017021          199 SSYF--KRMPKSSAIKVIDFGSTTYE------------RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       199 ~~~~--~~~~~~~~~~l~Dfg~~~~~------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~  264 (379)
                      ....  .........-.+++......            .......+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~  234 (364)
T cd05599         155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV  234 (364)
T ss_pred             ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence            1100  00000000000000000000            000112469999999999998899999999999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |..||...+..+....+......                     +..+.                        ....+++
T Consensus       235 G~~Pf~~~~~~~~~~~i~~~~~~---------------------~~~~~------------------------~~~~s~~  269 (364)
T cd05599         235 GYPPFCSDNPQETYRKIINWKET---------------------LQFPD------------------------EVPLSPE  269 (364)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCc---------------------cCCCC------------------------CCCCCHH
Confidence            99999876655443332211100                     00110                        0135678


Q ss_pred             HHHHHhhccccCCCCCcC---HHHHhcCCCCCCCC
Q 017021          345 LTHLLQGLLRYDPTDRLT---AREALRHPFFTRDH  376 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpt---a~e~l~hp~f~~~~  376 (379)
                      +.++|++||. +|.+|++   ++|+++||||+...
T Consensus       270 ~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~  303 (364)
T cd05599         270 AKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVD  303 (364)
T ss_pred             HHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCC
Confidence            9999999997 9999998   99999999998753

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.5e-44  Score=323.60  Aligned_cols=248  Identities=26%  Similarity=0.449  Sum_probs=216.3

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      .-.|+|.+.||+|.||.|-+|+....|+.||||.++++    +..--.+.+|++++..+     +||||+.+++.|+..+
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-----NHPhII~IyEVFENkd  126 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-----NHPHIIQIYEVFENKD  126 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-----CCCceeehhhhhcCCc
Confidence            45799999999999999999999999999999999743    22334556799999998     8899999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      .+.|||||. +|.|++++...+  .+++.+++.++.||++|+.|+|+.+++|||||.+|||+                  
T Consensus       127 KIvivMEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL------------------  186 (668)
T KOG0611|consen  127 KIVIVMEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL------------------  186 (668)
T ss_pred             eEEEEEEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhccceecccchhheee------------------
Confidence            999999999 999999999876  79999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCC-CccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWT-YPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                               +.++.+||+|||++..+....  .+++|++.|.+||++++.+|. +.+|.||||+++|.|+.|..||++.+
T Consensus       187 ---------D~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D  257 (668)
T KOG0611|consen  187 ---------DQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD  257 (668)
T ss_pred             ---------cCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch
Confidence                     777888999999987665554  457999999999999999986 89999999999999999999999987


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..-...+|.+.                       -+..|                           +.+.++..||++||
T Consensus       258 hk~lvrQIs~G-----------------------aYrEP---------------------------~~PSdA~gLIRwmL  287 (668)
T KOG0611|consen  258 HKRLVRQISRG-----------------------AYREP---------------------------ETPSDASGLIRWML  287 (668)
T ss_pred             HHHHHHHhhcc-----------------------cccCC---------------------------CCCchHHHHHHHHH
Confidence            65555444332                       22222                           24567899999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFT  373 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~  373 (379)
                      ..||++|.|+.++-.|=|++
T Consensus       288 mVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  288 MVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             hcCcccchhHHHHhhhheee
Confidence            99999999999999998875

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.7e-44  Score=326.96  Aligned_cols=258  Identities=24%  Similarity=0.374  Sum_probs=207.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      +|++.+.||+|+||.||++.+..+++.||+|++....    .....+..|+.++..+     +|++++.+++.+..++..
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   75 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-----NSRFVVSLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-----CCCCEeeeeeeecCCCeE
Confidence            4788899999999999999999999999999986432    1223456688888887     779999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      ++||||+ +++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||++                    
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~--------------------  135 (285)
T cd05605          76 CLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL--------------------  135 (285)
T ss_pred             EEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEE--------------------
Confidence            9999999 8999988876544468999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                             +.++.++|+|||.+.......  ....|+..|+|||.+.+..++.++||||+||++|++++|..||.+.+...
T Consensus       136 -------~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~  208 (285)
T cd05605         136 -------DDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV  208 (285)
T ss_pred             -------CCCCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh
Confidence                   455667888888776433222  23468899999999988889999999999999999999999998654432


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.......+                   .                          ......+..+.+||.+||+.|
T Consensus       209 ~~~~~~~~~~~~~-------------------~--------------------------~~~~~~~~~~~~li~~~l~~~  243 (285)
T cd05605         209 KREEVERRVKEDQ-------------------E--------------------------EYSEKFSEAARSICRQLLTKD  243 (285)
T ss_pred             HHHHHHHHhhhcc-------------------c--------------------------ccCcccCHHHHHHHHHHccCC
Confidence            2222211110000                   0                          011235678999999999999


Q ss_pred             CCCCc-----CHHHHhcCCCCCCCCcC
Q 017021          357 PTDRL-----TAREALRHPFFTRDHLR  378 (379)
Q Consensus       357 P~~Rp-----ta~e~l~hp~f~~~~~~  378 (379)
                      |++||     +++++++||||.....+
T Consensus       244 P~~R~~~~~~~~~~l~~~~~~~~~~~~  270 (285)
T cd05605         244 PGFRLGCRGEGAEEVKAHPFFRTANFK  270 (285)
T ss_pred             HHHhcCCCCCCHHHHhcCcCccCCCHH
Confidence            99999     99999999999986544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1.6e-43  Score=329.59  Aligned_cols=246  Identities=25%  Similarity=0.397  Sum_probs=197.8

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.||+|+||.||+|++..+++.||+|+++...    ........|..++...    ..|++++++++++.+.+..|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~hp~iv~~~~~~~~~~~~~lv~e   76 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA----WEHPFLTHLYCTFQTKENLFFVME   76 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc----cCCCcCcceEEEEEeCCEEEEEEe
Confidence            46899999999999999999999999997432    2223344455555443    378999999999999999999999


Q ss_pred             CC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          125 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                      |+ +++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||++                         
T Consensus        77 y~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~-------------------------  129 (316)
T cd05619          77 YLNGGDLMFHIQSCH--KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL-------------------------  129 (316)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE-------------------------
Confidence            99 899999997754  58899999999999999999999999999999999999                         


Q ss_pred             cCCCCCCeEEeecCcccccC---CCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          204 RMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                        +.++.++|+|||.+....   .......||..|+|||++.+..++.++|||||||++|+|++|..||...+..+....
T Consensus       130 --~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~  207 (316)
T cd05619         130 --DTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQS  207 (316)
T ss_pred             --CCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence              455567788888765321   112335689999999999988899999999999999999999999987665544433


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      +.......|                                                 ...+.++.++|.+||+.||++|
T Consensus       208 i~~~~~~~~-------------------------------------------------~~~~~~~~~li~~~l~~~P~~R  238 (316)
T cd05619         208 IRMDNPCYP-------------------------------------------------RWLTREAKDILVKLFVREPERR  238 (316)
T ss_pred             HHhCCCCCC-------------------------------------------------ccCCHHHHHHHHHHhccCHhhc
Confidence            322111111                                                 1245678999999999999999


Q ss_pred             cCHH-HHhcCCCCCCCC
Q 017021          361 LTAR-EALRHPFFTRDH  376 (379)
Q Consensus       361 pta~-e~l~hp~f~~~~  376 (379)
                      |++. ++++||||++..
T Consensus       239 ~~~~~~l~~h~~~~~~~  255 (316)
T cd05619         239 LGVKGDIRQHPFFREID  255 (316)
T ss_pred             CCChHHHHcCcccCCCC
Confidence            9996 899999998753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=7.3e-44  Score=338.78  Aligned_cols=259  Identities=24%  Similarity=0.396  Sum_probs=208.3

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      .......|++.+.||+|+||.||+|+++.+++.||+|+++...    .....+..|+.++..+     +|++++.+++++
T Consensus        38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-----~h~~iv~~~~~~  112 (370)
T cd05596          38 LRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-----NSEWIVQLHYAF  112 (370)
T ss_pred             CCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-----CCCCcceEEEEE
Confidence            3455668899999999999999999999999999999997422    2233455678877776     789999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      .+++..|+||||+ +++|.+++...   .+++..+..++.||+.||+|||+.||+||||||+||++              
T Consensus       113 ~~~~~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl--------------  175 (370)
T cd05596         113 QDDKYLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL--------------  175 (370)
T ss_pred             ecCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE--------------
Confidence            9999999999999 99999998764   48899999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCC----CCCCccchHhHHHHHHHHHh
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGL----GWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlG~il~~l~~  264 (379)
                                   +.++.++|+|||.+.......    ....||+.|+|||++.+.    .++.++|||||||++|+|++
T Consensus       176 -------------~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyellt  242 (370)
T cd05596         176 -------------DKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV  242 (370)
T ss_pred             -------------cCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHh
Confidence                         555678888888776543321    235689999999998653    37899999999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |+.||.+.+.......+......                     ..+|.                        ....+.+
T Consensus       243 G~~Pf~~~~~~~~~~~i~~~~~~---------------------~~~~~------------------------~~~~s~~  277 (370)
T cd05596         243 GDTPFYADSLVGTYSKIMDHKNS---------------------LTFPD------------------------DIEISKQ  277 (370)
T ss_pred             CCCCcCCCCHHHHHHHHHcCCCc---------------------CCCCC------------------------cCCCCHH
Confidence            99999876654443333221100                     11111                        1135778


Q ss_pred             HHHHHhhccccCCCC--CcCHHHHhcCCCCCCCC
Q 017021          345 LTHLLQGLLRYDPTD--RLTAREALRHPFFTRDH  376 (379)
Q Consensus       345 ~~~li~~~L~~dP~~--Rpta~e~l~hp~f~~~~  376 (379)
                      +.+||++||+.+|.+  |+|++|+++||||+...
T Consensus       278 ~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~  311 (370)
T cd05596         278 AKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQ  311 (370)
T ss_pred             HHHHHHHHccChhhccCCCCHHHHhcCcccCCCC
Confidence            999999999999998  99999999999998743

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=2.3e-43  Score=326.24  Aligned_cols=281  Identities=27%  Similarity=0.457  Sum_probs=219.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .|++.++||+|+||.||+|+++.+++.||+|.+...  .........|+.++..+     .|+|++++++++..++..++
T Consensus         7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~nI~~~~~~~~~~~~~~l   81 (301)
T cd07873           7 TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-----KHANIVTLHDIIHTEKSLTL   81 (301)
T ss_pred             ceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhc-----CCCCcceEEEEEecCCeEEE
Confidence            578889999999999999999999999999998633  22234566788888888     78999999999999999999


Q ss_pred             EEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          122 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      ||||+.++|.+++.... ..+++..+..++.|++.||.|||+.|++|+||||+||+++                      
T Consensus        82 v~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~----------------------  138 (301)
T cd07873          82 VFEYLDKDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLIN----------------------  138 (301)
T ss_pred             EEeccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEEC----------------------
Confidence            99999889999887653 3588999999999999999999999999999999999994                      


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                           .++.++|+|||.+.......   ....+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||...+..+.
T Consensus       139 -----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~  213 (301)
T cd07873         139 -----ERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ  213 (301)
T ss_pred             -----CCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                 44567777777665432221   22356889999999865 3578899999999999999999999998877777


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+....+.++...|+.+......    .....+..               ............++.+.+||.+||+.||
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---------------~~~~~~~~~~~~~~~~~~li~~ml~~dp  274 (301)
T cd07873         214 LHFIFRILGTPTEETWPGILSNEEF----KSYNYPKY---------------RADCLHNHAPRLDSDGAELLSKLLQFEG  274 (301)
T ss_pred             HHHHHHHcCCCChhhchhhhccccc----cccccCcc---------------ccccHHhhcCCCCHHHHHHHHHHhcCCc
Confidence            7777777777776666543221110    00111110               0001112223467789999999999999


Q ss_pred             CCCcCHHHHhcCCCCCCCC
Q 017021          358 TDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f~~~~  376 (379)
                      .+|||++|+++||||..-.
T Consensus       275 ~~R~t~~eil~h~~f~~~~  293 (301)
T cd07873         275 RKRISAEEAMKHPYFHCLG  293 (301)
T ss_pred             ccCcCHHHHhcCccccccc
Confidence            9999999999999997654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=7e-44  Score=340.67  Aligned_cols=279  Identities=27%  Similarity=0.409  Sum_probs=208.3

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|+++++||+|+||.||+|+++.+++.||+|++....    .....+..|+.++.++     +|++++++++.+.+++.+
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-----~h~~iv~~~~~~~~~~~~   76 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-----DNEWVVRLYYSFQDKDNL   76 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-----CCCcCCeEEEEEEeCCEE
Confidence            4778899999999999999999999999999997432    2334566788888887     779999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++.+..  .+++..+..++.||+.||+|||+.||+||||||+|||++.++.++++|||++......
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~  154 (382)
T cd05625          77 YFVMDYIPGGDMMSLLIRMG--IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT  154 (382)
T ss_pred             EEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence            9999999 899999987754  6899999999999999999999999999999999999988888888888876432111


Q ss_pred             Cc--ccccCCCCCCeEEeecC---------------------cccc-cCCCCCcccccCCccchhhhhCCCCCCccchHh
Q 017021          199 SS--YFKRMPKSSAIKVIDFG---------------------STTY-ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWS  254 (379)
Q Consensus       199 ~~--~~~~~~~~~~~~l~Dfg---------------------~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS  254 (379)
                      ..  .....+ .......+|.                     .... .........||+.|+|||++.+..++.++||||
T Consensus       155 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS  233 (382)
T cd05625         155 HDSKYYQSGD-HVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS  233 (382)
T ss_pred             cccccccccc-ccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEe
Confidence            00  000000 0000000000                     0000 000012347999999999999989999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHH
Q 017021          255 VGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI  334 (379)
Q Consensus       255 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (379)
                      |||++|+|++|+.||.+.+..+....+.......                     ..|.                     
T Consensus       234 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------------------~~p~---------------------  271 (382)
T cd05625         234 VGVILYEMLVGQPPFLAQTPLETQMKVINWQTSL---------------------HIPP---------------------  271 (382)
T ss_pred             chHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCc---------------------CCCC---------------------
Confidence            9999999999999998776654443332211110                     0000                     


Q ss_pred             HHhhccchhHHHHHHhhccccCCCCCcC---HHHHhcCCCCCCCC
Q 017021          335 MQHVDHSAGDLTHLLQGLLRYDPTDRLT---AREALRHPFFTRDH  376 (379)
Q Consensus       335 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt---a~e~l~hp~f~~~~  376 (379)
                         ....++++.++|.+|+ .||.+|++   ++++++||||+...
T Consensus       272 ---~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~  312 (382)
T cd05625         272 ---QAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTID  312 (382)
T ss_pred             ---cccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcC
Confidence               1235678999999976 59999997   99999999998753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=1.7e-43  Score=330.33  Aligned_cols=250  Identities=25%  Similarity=0.371  Sum_probs=202.0

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      |++.+.||+|+||.||+|.++.+|+.||+|+++...    ........|..++..+    .++++++.+++++.+.+.+|
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~~~~i~~~~~~~~~~~~~~   77 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQ----DKPPFLTQLHSCFQTVDRLY   77 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhc----cCCCchhheeeEEecCCEEE
Confidence            567799999999999999999999999999997432    1223345566665554    35577888999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|.+++....  .+++..+..++.||+.||.|||+.|++||||||+||++                     
T Consensus        78 lv~Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill---------------------  134 (323)
T cd05615          78 FVMEYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML---------------------  134 (323)
T ss_pred             EEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---------------------
Confidence            999999 899999987754  68999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            +.++.++|+|||.+......   .....||+.|+|||++.+..++.++|+|||||++|+|++|..||.+.+...
T Consensus       135 ------~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~  208 (323)
T cd05615         135 ------DSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE  208 (323)
T ss_pred             ------CCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH
Confidence                  45566788888877543222   233468999999999998889999999999999999999999998766554


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.......|                                                 ...+.++.+++.+||+.|
T Consensus       209 ~~~~i~~~~~~~p-------------------------------------------------~~~~~~~~~li~~~l~~~  239 (323)
T cd05615         209 LFQSIMEHNVSYP-------------------------------------------------KSLSKEAVSICKGLMTKH  239 (323)
T ss_pred             HHHHHHhCCCCCC-------------------------------------------------ccCCHHHHHHHHHHcccC
Confidence            4443332211111                                                 124568899999999999


Q ss_pred             CCCCcC-----HHHHhcCCCCCCCC
Q 017021          357 PTDRLT-----AREALRHPFFTRDH  376 (379)
Q Consensus       357 P~~Rpt-----a~e~l~hp~f~~~~  376 (379)
                      |.+|++     ..++++||||....
T Consensus       240 p~~R~~~~~~~~~~i~~h~~f~~~~  264 (323)
T cd05615         240 PSKRLGCGPEGERDIREHAFFRRID  264 (323)
T ss_pred             HhhCCCCCCCCHHHHhcCcccCCCC
Confidence            999997     57999999998754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=2e-43  Score=329.23  Aligned_cols=245  Identities=24%  Similarity=0.382  Sum_probs=198.4

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.||+|+||.||+|+++.+++.||+|+++...    ........|..++..+    ..|++++++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~----~~h~~i~~~~~~~~~~~~~~lv~e   76 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALA----GKHPFLTQLHSCFQTKDRLFFVME   76 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhc----cCCCCccceeeEEEcCCEEEEEEc
Confidence            46899999999999999999999999997432    2233445566666554    267899999999999999999999


Q ss_pred             CC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          125 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                      |+ +++|...+....  .+++..+..++.||+.||.|||+.|++||||||+||++                         
T Consensus        77 ~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill-------------------------  129 (318)
T cd05570          77 YVNGGDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL-------------------------  129 (318)
T ss_pred             CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE-------------------------
Confidence            99 899999887764  68999999999999999999999999999999999999                         


Q ss_pred             cCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          204 RMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                        +.++.++|+|||.+.....   ......||..|+|||++.+..++.++|+|||||++|+|++|..||...+..+....
T Consensus       130 --~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~  207 (318)
T cd05570         130 --DSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQS  207 (318)
T ss_pred             --CCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHH
Confidence              4555677777777653211   12334689999999999998999999999999999999999999987665443332


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      +.....                       .+                          ....+..+.+||++||+.||++|
T Consensus       208 i~~~~~-----------------------~~--------------------------~~~~~~~~~~li~~~l~~dP~~R  238 (318)
T cd05570         208 ILEDEV-----------------------RY--------------------------PRWLSKEAKSILKSFLTKNPEKR  238 (318)
T ss_pred             HHcCCC-----------------------CC--------------------------CCcCCHHHHHHHHHHccCCHHHc
Confidence            221100                       01                          11356789999999999999999


Q ss_pred             cCH-----HHHhcCCCCCCC
Q 017021          361 LTA-----REALRHPFFTRD  375 (379)
Q Consensus       361 pta-----~e~l~hp~f~~~  375 (379)
                      ||+     .++++||||+..
T Consensus       239 ~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         239 LGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             CCCCCCCHHHHhcCCCcCCC
Confidence            999     999999999874

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7e-44  Score=340.08  Aligned_cols=277  Identities=24%  Similarity=0.360  Sum_probs=206.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.++||+|+||.||+|.++.+++.||+|++....    .....+..|+.++..+     .|++++++++++.++.++
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-----~hp~iv~~~~~~~~~~~~   76 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-----DSPWVVSLYYSFQDAQYL   76 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-----CCCCcceEEEEEEcCCee
Confidence            4788899999999999999999999999999986432    1223455677777776     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++....  .+++..+..++.|++.||+|||+.||+||||||+||+++.++.++++|||++......
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~  154 (377)
T cd05629          77 YLIMEFLPGGDLMTMLIKYD--TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ  154 (377)
T ss_pred             EEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence            9999999 999999997654  6899999999999999999999999999999999999998888889999887432111


Q ss_pred             Ccc--c----------ccCCCCCC-------------eEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchH
Q 017021          199 SSY--F----------KRMPKSSA-------------IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIW  253 (379)
Q Consensus       199 ~~~--~----------~~~~~~~~-------------~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvw  253 (379)
                      ...  .          ........             ..+.+++.....  ......||+.|+|||++.+..++.++|||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  232 (377)
T cd05629         155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRL--MAYSTVGTPDYIAPEIFLQQGYGQECDWW  232 (377)
T ss_pred             cccccccccccccccccccccccccccccccccccchhhhhhhhhcccc--cccccCCCccccCHHHHccCCCCCceeeE
Confidence            000  0          00000000             001111111000  00124699999999999988999999999


Q ss_pred             hHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHH
Q 017021          254 SVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL  333 (379)
Q Consensus       254 SlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (379)
                      ||||++|+|++|..||...+..+....+......                     +.+|+                    
T Consensus       233 SlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------------~~~p~--------------------  271 (377)
T cd05629         233 SLGAIMFECLIGWPPFCSENSHETYRKIINWRET---------------------LYFPD--------------------  271 (377)
T ss_pred             ecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCc---------------------cCCCC--------------------
Confidence            9999999999999999876654444333221100                     11111                    


Q ss_pred             HHHhhccchhHHHHHHhhccccCCCCC---cCHHHHhcCCCCCCC
Q 017021          334 IMQHVDHSAGDLTHLLQGLLRYDPTDR---LTAREALRHPFFTRD  375 (379)
Q Consensus       334 ~~~~~~~~~~~~~~li~~~L~~dP~~R---pta~e~l~hp~f~~~  375 (379)
                          ....+.++.+||.+||+ +|.+|   +|+.|+++||||++.
T Consensus       272 ----~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~  311 (377)
T cd05629         272 ----DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV  311 (377)
T ss_pred             ----CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence                01356789999999998 67665   599999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=6.7e-44  Score=333.47  Aligned_cols=244  Identities=26%  Similarity=0.427  Sum_probs=198.0

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.||+|+||.||++++..+++.||+|++....    ........|..++..+     .|++++.+.+.+..++..|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~-----~hp~i~~~~~~~~~~~~~~lv~E   75 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-----RHPFLTALKYSFQTHDRLCFVME   75 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-----CCCCCCceEEEEEcCCEEEEEEe
Confidence            46899999999999999999999999997432    1223445566666665     77999999999999999999999


Q ss_pred             CC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          125 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      |+ +++|.+.+....  .+++..+..++.||+.||.|||+ .||+||||||+||++                        
T Consensus        76 ~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll------------------------  129 (325)
T cd05594          76 YANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML------------------------  129 (325)
T ss_pred             CCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE------------------------
Confidence            99 899998887654  68999999999999999999997 799999999999999                        


Q ss_pred             ccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHH
Q 017021          203 KRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  279 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~  279 (379)
                         +.++.++|+|||.+......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+...
T Consensus       130 ---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~  206 (325)
T cd05594         130 ---DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE  206 (325)
T ss_pred             ---CCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHH
Confidence               45566788888877532221   123468999999999998889999999999999999999999998765544333


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                      .+......                       .                          ....++++.++|.+||+.||++
T Consensus       207 ~i~~~~~~-----------------------~--------------------------p~~~~~~~~~li~~~L~~dP~~  237 (325)
T cd05594         207 LILMEEIR-----------------------F--------------------------PRTLSPEAKSLLSGLLKKDPKQ  237 (325)
T ss_pred             HHhcCCCC-----------------------C--------------------------CCCCCHHHHHHHHHHhhcCHHH
Confidence            22111111                       1                          1235678999999999999999


Q ss_pred             Cc-----CHHHHhcCCCCCCC
Q 017021          360 RL-----TAREALRHPFFTRD  375 (379)
Q Consensus       360 Rp-----ta~e~l~hp~f~~~  375 (379)
                      |+     ++.++++||||...
T Consensus       238 R~~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         238 RLGGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             hCCCCCCCHHHHhcCCCcCCC
Confidence            97     99999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.8e-43  Score=335.78  Aligned_cols=259  Identities=23%  Similarity=0.400  Sum_probs=206.9

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      .......|++.+.||+|+||.||+|+++.+++.||+|++....    .....+.+|+.++..+     .|++++++++.+
T Consensus        38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-----~hp~iv~~~~~~  112 (370)
T cd05621          38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-----NSPWVVQLFCAF  112 (370)
T ss_pred             cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-----CCCCEeeEEEEE
Confidence            3445567899999999999999999999999999999986421    2233455677777776     789999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      ..+...|+||||+ +++|.+++...   .+++..+..++.||+.||+|||+.||+||||||+||++              
T Consensus       113 ~~~~~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl--------------  175 (370)
T cd05621         113 QDDKYLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL--------------  175 (370)
T ss_pred             EcCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE--------------
Confidence            9999999999999 99999999764   48899999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCC----CCCccchHhHHHHHHHHHh
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlG~il~~l~~  264 (379)
                                   +.++.++|+|||.+.......    ....||+.|+|||++.+..    ++.++|+|||||++|+|++
T Consensus       176 -------------~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~  242 (370)
T cd05621         176 -------------DKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLV  242 (370)
T ss_pred             -------------CCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHh
Confidence                         555678888888876543222    2456999999999997643    7789999999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |..||.+.+.......+......                     +.+|.                        ....+..
T Consensus       243 G~~Pf~~~~~~~~~~~i~~~~~~---------------------~~~p~------------------------~~~~s~~  277 (370)
T cd05621         243 GDTPFYADSLVGTYSKIMDHKNS---------------------LNFPE------------------------DVEISKH  277 (370)
T ss_pred             CCCCCCCCCHHHHHHHHHhCCcc---------------------cCCCC------------------------cccCCHH
Confidence            99999876655444333221111                     11111                        0125678


Q ss_pred             HHHHHhhccccCCCC--CcCHHHHhcCCCCCCCC
Q 017021          345 LTHLLQGLLRYDPTD--RLTAREALRHPFFTRDH  376 (379)
Q Consensus       345 ~~~li~~~L~~dP~~--Rpta~e~l~hp~f~~~~  376 (379)
                      ++++|.+||+.+|.+  |+|++|+++||||+...
T Consensus       278 ~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~  311 (370)
T cd05621         278 AKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQ  311 (370)
T ss_pred             HHHHHHHHccCchhccCCCCHHHHhcCcccCCCC
Confidence            999999999866654  89999999999998753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=4.8e-44  Score=341.12  Aligned_cols=280  Identities=25%  Similarity=0.374  Sum_probs=206.7

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.++||+|+||.||+|+++.+++.||+|++....    .....+..|+.++..+     .|++++++++.+.+++.+
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-----~h~~iv~~~~~~~~~~~~   76 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA-----DNEWVVKLYYSFQDKDNL   76 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-----CCCCcceEEEEEEcCCEE
Confidence            4788999999999999999999999999999986432    2234556788888887     779999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++...+  .+++..+..++.||+.||+|||+.||+||||||+||+++.++.++++|||++......
T Consensus        77 ~lv~E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~  154 (376)
T cd05598          77 YFVMDYIPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT  154 (376)
T ss_pred             EEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence            9999999 999999997764  6889999999999999999999999999999999999988888888888876322100


Q ss_pred             --Cccccc-----CCC-CCCeEEeecC--------ccc---ccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHH
Q 017021          199 --SSYFKR-----MPK-SSAIKVIDFG--------STT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL  259 (379)
Q Consensus       199 --~~~~~~-----~~~-~~~~~l~Dfg--------~~~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il  259 (379)
                        ......     .+. .......+..        ...   ..........||+.|+|||++.+..++.++|||||||++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil  234 (376)
T cd05598         155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL  234 (376)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence              000000     000 0000000000        000   000001234799999999999998999999999999999


Q ss_pred             HHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhc
Q 017021          260 VELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD  339 (379)
Q Consensus       260 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (379)
                      |+|++|+.||.+.+..+....+.......                     ..+                        ...
T Consensus       235 yell~G~~Pf~~~~~~~~~~~i~~~~~~~---------------------~~~------------------------~~~  269 (376)
T cd05598         235 YEMLVGQPPFLADTPAETQLKVINWETTL---------------------HIP------------------------SQA  269 (376)
T ss_pred             eehhhCCCCCCCCCHHHHHHHHhccCccc---------------------cCC------------------------CCC
Confidence            99999999998766554433222111000                     000                        011


Q ss_pred             cchhHHHHHHhhccccCCCCCc---CHHHHhcCCCCCCCC
Q 017021          340 HSAGDLTHLLQGLLRYDPTDRL---TAREALRHPFFTRDH  376 (379)
Q Consensus       340 ~~~~~~~~li~~~L~~dP~~Rp---ta~e~l~hp~f~~~~  376 (379)
                      ..+.++.++|.+|+ .+|.+|+   |+.|+++||||+..+
T Consensus       270 ~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~~  308 (376)
T cd05598         270 KLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGID  308 (376)
T ss_pred             CCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCCC
Confidence            35678899999976 5999999   999999999998753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=3.5e-43  Score=329.14  Aligned_cols=254  Identities=22%  Similarity=0.393  Sum_probs=194.6

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.||+|+||.||+|+++.+++.||+|+++...    .....+..|..++..+    .+|++++.+++++.+.+..|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~----~~hp~Iv~~~~~~~~~~~~~lv~e   76 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETA----SNHPFLVGLHSCFQTESRLFFVIE   76 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhc----cCCCCCCceEEEEEcCCEEEEEEe
Confidence            46899999999999999999999999997432    1223345566666655    367899999999999999999999


Q ss_pred             CC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          125 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                      |+ +++|.+++....  .+++..+..++.||+.||.|||+.|++||||||+||++                         
T Consensus        77 ~~~~g~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili-------------------------  129 (329)
T cd05588          77 FVSGGDLMFHMQRQR--KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL-------------------------  129 (329)
T ss_pred             CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE-------------------------
Confidence            99 899999887654  69999999999999999999999999999999999999                         


Q ss_pred             cCCCCCCeEEeecCcccccC---CCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          204 RMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                        +.++.++|+|||.+....   .......||+.|+|||++.+..++.++|+|||||++|+|++|+.||......+.   
T Consensus       130 --~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~---  204 (329)
T cd05588         130 --DAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDN---  204 (329)
T ss_pred             --CCCCCEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccccccc---
Confidence              445567777877765321   112345789999999999998999999999999999999999999964221000   


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                              +..   .........+..+....                          ....+..+.++|++||+.||.+|
T Consensus       205 --------~~~---~~~~~~~~~~~~~~~~~--------------------------p~~~~~~~~~li~~~L~~dP~~R  247 (329)
T cd05588         205 --------PDQ---NTEDYLFQVILEKQIRI--------------------------PRSLSVKASSVLKGFLNKDPKER  247 (329)
T ss_pred             --------ccc---cchHHHHHHHHcCCCCC--------------------------CCCCCHHHHHHHHHHhccCHHHc
Confidence                    000   00000000001111111                          12356789999999999999999


Q ss_pred             cC------HHHHhcCCCCCCC
Q 017021          361 LT------AREALRHPFFTRD  375 (379)
Q Consensus       361 pt------a~e~l~hp~f~~~  375 (379)
                      +|      ++|+++||||...
T Consensus       248 ~~~~~~~~~~~i~~hp~~~~~  268 (329)
T cd05588         248 LGCHPQTGFRDIKSHPFFRNI  268 (329)
T ss_pred             CCCCCCCCHHHHhcCCCCCCC
Confidence            97      7899999999753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=3.1e-43  Score=328.69  Aligned_cols=244  Identities=24%  Similarity=0.417  Sum_probs=198.7

Q ss_pred             hccccccceeEEEEEec---CCCceEEEEEeeccc-----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           49 SKMGEGTFGQVLECWDR---ERKEMVAIKIVRGIK-----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ++||+|+||.||++++.   .+++.||+|+++...     ........|+.++..+     .|+||+++++.+..++..|
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-----~hp~iv~~~~~~~~~~~~~   76 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-----KHPFIVDLIYAFQTGGKLY   76 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-----CCCchhceeeEEecCCeEE
Confidence            68999999999999864   578999999987422     2234456788888887     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|.+.+...+  .+++..+..++.||+.||.|||+.|++||||||+||++                     
T Consensus        77 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---------------------  133 (323)
T cd05584          77 LILEYLSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL---------------------  133 (323)
T ss_pred             EEEeCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---------------------
Confidence            999999 899999997765  68889999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            +.++.++|+|||.+......   .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+...
T Consensus       134 ------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~  207 (323)
T cd05584         134 ------DAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK  207 (323)
T ss_pred             ------CCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH
Confidence                  45566788888876532221   223468999999999988889999999999999999999999998765544


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+......                       .+                          ...+..+.++|.+||+.|
T Consensus       208 ~~~~~~~~~~~-----------------------~~--------------------------~~~~~~~~~li~~~l~~~  238 (323)
T cd05584         208 TIDKILKGKLN-----------------------LP--------------------------PYLTPEARDLLKKLLKRN  238 (323)
T ss_pred             HHHHHHcCCCC-----------------------CC--------------------------CCCCHHHHHHHHHHcccC
Confidence            33332221111                       11                          124578899999999999


Q ss_pred             CCCCc-----CHHHHhcCCCCCCC
Q 017021          357 PTDRL-----TAREALRHPFFTRD  375 (379)
Q Consensus       357 P~~Rp-----ta~e~l~hp~f~~~  375 (379)
                      |++||     ++.++++||||...
T Consensus       239 p~~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         239 PSSRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             HhHcCCCCCCCHHHHhcCCCcCCC
Confidence            99999     89999999999764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=2.7e-43  Score=330.38  Aligned_cols=255  Identities=25%  Similarity=0.412  Sum_probs=197.6

Q ss_pred             hhhhhhccccccceeEEEEEec---CCCceEEEEEeeccc-----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           44 ADKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGIK-----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      .|++.++||+|+||.||++++.   .+++.||+|++....     ........|..++..+    .+|++++.+++.+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l----~~~~~i~~~~~~~~~   76 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHV----RQSPFLVTLHYAFQT   76 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhc----cCCCCcccEEEEEec
Confidence            3788899999999999999864   578999999987421     1223445677777665    357889999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      ++..++||||+ +++|.+.+....  .+++..+..++.||+.||.|||+.|++||||||+||++                
T Consensus        77 ~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili----------------  138 (332)
T cd05614          77 EAKLHLILDYVSGGEMFTHLYQRD--NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL----------------  138 (332)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE----------------
Confidence            99999999999 899999987654  68999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                                 +.++.++|+|||.+.......    ....||+.|+|||.+.+. .++.++|||||||++|+|++|+.||
T Consensus       139 -----------~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf  207 (332)
T cd05614         139 -----------DSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPF  207 (332)
T ss_pred             -----------CCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCC
Confidence                       455667888888776432221    234689999999999765 4789999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      ...........+.+..                   ......                          .....+..+.++|
T Consensus       208 ~~~~~~~~~~~~~~~~-------------------~~~~~~--------------------------~~~~~~~~~~~li  242 (332)
T cd05614         208 TLEGERNTQSEVSRRI-------------------LKCDPP--------------------------FPSFIGPEAQDLL  242 (332)
T ss_pred             CCCCCCCCHHHHHHHH-------------------hcCCCC--------------------------CCCCCCHHHHHHH
Confidence            6432211111111000                   000000                          1123567899999


Q ss_pred             hhccccCCCCCc-----CHHHHhcCCCCCCCC
Q 017021          350 QGLLRYDPTDRL-----TAREALRHPFFTRDH  376 (379)
Q Consensus       350 ~~~L~~dP~~Rp-----ta~e~l~hp~f~~~~  376 (379)
                      .+||+.||++||     +++++++||||++..
T Consensus       243 ~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~  274 (332)
T cd05614         243 HKLLRKDPKKRLGAGPQGASEIKEHPFFKGLD  274 (332)
T ss_pred             HHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence            999999999999     889999999998753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=9.4e-43  Score=319.34  Aligned_cols=277  Identities=30%  Similarity=0.481  Sum_probs=213.4

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.+.||+|++|.||+|+++.+++.||+|+++...   ........|+.++..+     .|++++++++.+..++..|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   75 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKEL-----QHPNIVCLQDVLMQESRLY   75 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhc-----CCCCEeeeEEEEeeCCeEE
Confidence            3778899999999999999999999999999986432   2234566788888888     6899999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKLGSSLYDFLRKNN-YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+.++|.+++.... ...+++..+..++.||+.||.|||+.|++||||+|+||+++                    
T Consensus        76 ~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~--------------------  135 (285)
T cd07861          76 LIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID--------------------  135 (285)
T ss_pred             EEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc--------------------
Confidence            999999778988886532 24689999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                             .++.++|+|||.+.......   ....+++.|+|||.+.+. .++.++|+|||||++|+|++|+.||.+....
T Consensus       136 -------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~  208 (285)
T cd07861         136 -------NKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI  208 (285)
T ss_pred             -------CCCcEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence                   44556667777665332221   123567889999988654 4789999999999999999999999987776


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.+..+......|+...........  ...+                  ............+.++.++|++||+.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------------------~~~~~~~~~~~~~~~~~~li~~~l~~  268 (285)
T cd07861         209 DQLFRIFRILGTPTEDVWPGVTSLPDYKNT--FPKW------------------KKGSLRSAVKNLDEDGLDLLEKMLIY  268 (285)
T ss_pred             HHHHHHHHHhCCCChhhhhcchhhHHHHhh--cccc------------------CcchhHHhcCCCCHHHHHHHHHHhcC
Confidence            666666666666666655543322111000  0000                  00111122334778999999999999


Q ss_pred             CCCCCcCHHHHhcCCCC
Q 017021          356 DPTDRLTAREALRHPFF  372 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f  372 (379)
                      ||++|||+.++++||||
T Consensus       269 dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         269 DPAKRISAKKALNHPYF  285 (285)
T ss_pred             ChhhCCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=4e-43  Score=327.96  Aligned_cols=244  Identities=27%  Similarity=0.410  Sum_probs=194.3

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccch----hhHhHHHHHHHH-HHHHhcCCCCCeeEEecceeeecceEEEEE
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVL-QQLAKHDKGGNRCVQIRNWFDYRNHICIVF  123 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~e~~~l-~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~  123 (379)
                      +.||+|+||+||+|+++.+|+.||+|++.....    .......|...+ ..+     .|++++.+++.+...+..|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l-----~hp~iv~~~~~~~~~~~~~lv~   75 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV-----KHPFLVGLHYSFQTADKLYFVL   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC-----CCCCCCCeeEEEEeCCEEEEEE
Confidence            468999999999999999999999999974321    112223333322 233     7899999999999999999999


Q ss_pred             eCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          124 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       124 e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      ||+ +++|..++....  .+++..+..++.||+.||.|||+.||+||||||+||++                        
T Consensus        76 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll------------------------  129 (323)
T cd05575          76 DYVNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL------------------------  129 (323)
T ss_pred             cCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE------------------------
Confidence            999 899999987754  68999999999999999999999999999999999999                        


Q ss_pred             ccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHH
Q 017021          203 KRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  279 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~  279 (379)
                         +.++.++|+|||.+......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+...
T Consensus       130 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~  206 (323)
T cd05575         130 ---DSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYD  206 (323)
T ss_pred             ---CCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHH
Confidence               45566788888877532211   233468999999999999889999999999999999999999998765544433


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                      .+......                                                 .....+..+.++|.+||+.||.+
T Consensus       207 ~i~~~~~~-------------------------------------------------~~~~~~~~~~~li~~~l~~~p~~  237 (323)
T cd05575         207 NILNKPLR-------------------------------------------------LKPNISVSARHLLEGLLQKDRTK  237 (323)
T ss_pred             HHHcCCCC-------------------------------------------------CCCCCCHHHHHHHHHHhhcCHHh
Confidence            32211100                                                 01134678999999999999999


Q ss_pred             CcCH----HHHhcCCCCCCC
Q 017021          360 RLTA----REALRHPFFTRD  375 (379)
Q Consensus       360 Rpta----~e~l~hp~f~~~  375 (379)
                      ||++    .++++||||...
T Consensus       238 R~~~~~~~~~il~~~~~~~~  257 (323)
T cd05575         238 RLGAKDDFLEIKNHVFFSSI  257 (323)
T ss_pred             CCCCCCCHHHHHcCCCcCCC
Confidence            9998    699999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=7.1e-43  Score=327.00  Aligned_cols=254  Identities=21%  Similarity=0.387  Sum_probs=194.3

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.||+|+||.||+|+++.+++.||+|+++...    ........|..++.++    .+|++++.+++++..++..|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~----~~hp~iv~~~~~~~~~~~~~lv~E   76 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA----SNHPFLVGLHSCFQTESRLFFVIE   76 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhc----CCCCcCCceeeEEEeCCEEEEEEe
Confidence            46899999999999999999999999997432    1223344566555544    367999999999999999999999


Q ss_pred             CC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          125 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                      |+ +++|...+....  .+++..+..++.||+.||.|||+.|++||||||+||++                         
T Consensus        77 ~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili-------------------------  129 (329)
T cd05618          77 YVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL-------------------------  129 (329)
T ss_pred             CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE-------------------------
Confidence            99 899998887654  68999999999999999999999999999999999999                         


Q ss_pred             cCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          204 RMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                        +.++.++|+|||.+.....   ......||..|+|||++.+..++.++|||||||++|+|++|..||........   
T Consensus       130 --~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~---  204 (329)
T cd05618         130 --DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN---  204 (329)
T ss_pred             --CCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCC---
Confidence              5556788888887754221   12345789999999999998999999999999999999999999953211000   


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                              +..   .........+.......                          +...+..+.++|.+||+.||++|
T Consensus       205 --------~~~---~~~~~~~~~i~~~~~~~--------------------------p~~~~~~~~~ll~~~L~~dP~~R  247 (329)
T cd05618         205 --------PDQ---NTEDYLFQVILEKQIRI--------------------------PRSLSVKAASVLKSFLNKDPKER  247 (329)
T ss_pred             --------ccc---ccHHHHHHHHhcCCCCC--------------------------CCCCCHHHHHHHHHHhcCCHHHc
Confidence                    000   00000000000111111                          12356789999999999999999


Q ss_pred             cC------HHHHhcCCCCCCC
Q 017021          361 LT------AREALRHPFFTRD  375 (379)
Q Consensus       361 pt------a~e~l~hp~f~~~  375 (379)
                      ||      ++++++||||+..
T Consensus       248 ~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         248 LGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             CCCCCCCCHHHHhcCCCCCCC
Confidence            98      4899999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=1.2e-43  Score=332.49  Aligned_cols=253  Identities=26%  Similarity=0.420  Sum_probs=201.9

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccch----hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|+||.||+|+++.+++.||+|+++....    ....+..|+.++..+     +|++++.+++.+.+.+..
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-----~~~~i~~~~~~~~~~~~~   76 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-----NSPWIPQLQYAFQDKDNL   76 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-----CCCCCcceeeEEecCCeE
Confidence            47888999999999999999999999999999974322    334455666666665     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||++                    
T Consensus        77 ~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll--------------------  135 (330)
T cd05601          77 YLVMEYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI--------------------  135 (330)
T ss_pred             EEEECCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEE--------------------
Confidence            9999999 999999998753 368999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhh------CCCCCCccchHhHHHHHHHHHhCCCC
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVIL------GLGWTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~------~~~~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                             +..+.++|+|||.+.......    ....||+.|+|||++.      ...++.++|||||||++|+|++|..|
T Consensus       136 -------~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~P  208 (330)
T cd05601         136 -------DRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSP  208 (330)
T ss_pred             -------CCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCC
Confidence                   455667777777775433322    2236899999999986      45678999999999999999999999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |...+..+....+.....                     ...++.                        ....+.++.+|
T Consensus       209 f~~~~~~~~~~~i~~~~~---------------------~~~~~~------------------------~~~~~~~~~~l  243 (330)
T cd05601         209 FHEGTSAKTYNNIMNFQR---------------------FLKFPE------------------------DPKVSSDFLDL  243 (330)
T ss_pred             CCCCCHHHHHHHHHcCCC---------------------ccCCCC------------------------CCCCCHHHHHH
Confidence            987655444333222100                     000110                        01356789999


Q ss_pred             HhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          349 LQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      |++||+ ||.+|||++++++||||+..
T Consensus       244 i~~ll~-~p~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         244 IQSLLC-GQKERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             HHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence            999998 99999999999999999864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=3.4e-43  Score=322.73  Aligned_cols=258  Identities=26%  Similarity=0.405  Sum_probs=204.5

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      +|++.+.||+|+||.||++.+..+++.||+|.+....    ........|+.++..+     .|++++.+.+.+.+.+..
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-----~~~~i~~~~~~~~~~~~~   75 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-----NSRFVVSLAYAYETKDAL   75 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC-----CCCCeeeeeEEEecCCEE
Confidence            3677799999999999999999999999999986432    1223455688888887     678999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||++                    
T Consensus        76 ~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~--------------------  135 (285)
T cd05630          76 CLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILL--------------------  135 (285)
T ss_pred             EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE--------------------
Confidence            9999999 8999999876554468999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                             +..+.++|+|||.+.......  ....||..|+|||.+.+..++.++|+||+||++|+|++|+.||.......
T Consensus       136 -------~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~  208 (285)
T cd05630         136 -------DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI  208 (285)
T ss_pred             -------CCCCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc
Confidence                   455567888888775433221  23468999999999998889999999999999999999999997643211


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ............+                                             .......++++.+|+++||+.|
T Consensus       209 ~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~li~~~l~~~  243 (285)
T cd05630         209 KREEVERLVKEVQ---------------------------------------------EEYSEKFSPDARSLCKMLLCKD  243 (285)
T ss_pred             hHHHHHhhhhhhh---------------------------------------------hhcCccCCHHHHHHHHHHhhcC
Confidence            1111111000000                                             0112245678999999999999


Q ss_pred             CCCCcC-----HHHHhcCCCCCCCCcC
Q 017021          357 PTDRLT-----AREALRHPFFTRDHLR  378 (379)
Q Consensus       357 P~~Rpt-----a~e~l~hp~f~~~~~~  378 (379)
                      |++|||     ++|+++||||++.++.
T Consensus       244 p~~R~s~~~~~~~~~~~h~~~~~~~~~  270 (285)
T cd05630         244 PKERLGCQGGGAREVKEHPLFKQINFK  270 (285)
T ss_pred             HHHccCCCCCchHHHHcChhhhccCHH
Confidence            999999     9999999999976543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=1e-42  Score=319.06  Aligned_cols=276  Identities=29%  Similarity=0.465  Sum_probs=211.5

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.+.||+|++|.||+|.++.+|+.||+|+++...   ........|+.++..+     .|++++++++++.+....+
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l-----~h~~i~~~~~~~~~~~~~~   75 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-----KHKNIVRLYDVLHSDKKLT   75 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhc-----CCCCeeeHHHHhccCCceE
Confidence            4788899999999999999999999999999986422   2234556788888888     7799999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +++||++++|.+++.... ..+++..+..++.||+.||.|||+.|++||||||+||+++                     
T Consensus        76 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~---------------------  133 (284)
T cd07839          76 LVFEYCDQDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN---------------------  133 (284)
T ss_pred             EEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc---------------------
Confidence            999999888988887643 3589999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCC-CCCchH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALF-QTHENL  275 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf-~~~~~~  275 (379)
                            .++.++|+|||.+.......   ....++..|+|||.+.+. .++.++|||||||++|+|++|..|+ .+.+..
T Consensus       134 ------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~  207 (284)
T cd07839         134 ------KNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD  207 (284)
T ss_pred             ------CCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH
Confidence                  44556777777665433221   123567889999998764 4689999999999999999988885 444555


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.+..+..+...|+.+........   ....+.                 ...........+.+++++|++||+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----------------~~~~~~~~~~~~~~~~~li~~~l~~  267 (284)
T cd07839         208 DQLKRIFRLLGTPTEESWPGVSKLPDYKP---YPMYPA-----------------TTSLVNVVPKLNSTGRDLLQNLLVC  267 (284)
T ss_pred             HHHHHHHHHhCCCChHHhHHhhhcccccc---cCCCCC-----------------cchhhhhcccCCHHHHHHHHHHhcC
Confidence            55666666777766665554332221100   000000                 0001112234678899999999999


Q ss_pred             CCCCCcCHHHHhcCCCC
Q 017021          356 DPTDRLTAREALRHPFF  372 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f  372 (379)
                      ||.+|||++|+++||||
T Consensus       268 ~P~~R~t~~~il~h~~f  284 (284)
T cd07839         268 NPVQRISAEEALQHPYF  284 (284)
T ss_pred             ChhhcCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=2.9e-43  Score=333.82  Aligned_cols=278  Identities=23%  Similarity=0.345  Sum_probs=206.7

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|+||.||+|.++.+++.||+|++....    .....+..|+.++..+     .|++++++++.+.+.+..
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~iv~~~~~~~~~~~~   76 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA-----DGAWVVKMFYSFQDKRNL   76 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-----CCCCEeeEEEEEEcCCEE
Confidence            4678899999999999999999999999999997432    2234455677777776     779999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++.+..  .+++..+..++.|++.||.|||+.||+||||||+||+++.++.++++|||++......
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~  154 (360)
T cd05627          77 YLIMEFLPGGDMMTLLMKKD--TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA  154 (360)
T ss_pred             EEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence            9999999 899999997754  6899999999999999999999999999999999999988888888888876533221


Q ss_pred             Ccccc-cCCCCCCeEEeecCccc-----c-------cCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhC
Q 017021          199 SSYFK-RMPKSSAIKVIDFGSTT-----Y-------ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG  265 (379)
Q Consensus       199 ~~~~~-~~~~~~~~~l~Dfg~~~-----~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g  265 (379)
                      ..... ........  .++....     .       ........+||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus       155 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG  232 (360)
T cd05627         155 HRTEFYRNLTHNPP--SDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG  232 (360)
T ss_pred             cccccccccccCCc--ccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccC
Confidence            10000 00000000  0000000     0       00001234799999999999999999999999999999999999


Q ss_pred             CCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          266 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       266 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                      +.||...+..+....+......                     ..+|.                        ....+.++
T Consensus       233 ~~Pf~~~~~~~~~~~i~~~~~~---------------------~~~p~------------------------~~~~s~~~  267 (360)
T cd05627         233 YPPFCSETPQETYRKVMNWKET---------------------LVFPP------------------------EVPISEKA  267 (360)
T ss_pred             CCCCCCCCHHHHHHHHHcCCCc---------------------eecCC------------------------CCCCCHHH
Confidence            9999876665544433221100                     00110                        01256789


Q ss_pred             HHHHhhccccCCCCCc---CHHHHhcCCCCCCCC
Q 017021          346 THLLQGLLRYDPTDRL---TAREALRHPFFTRDH  376 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rp---ta~e~l~hp~f~~~~  376 (379)
                      +++|.+|+. ||.+|+   +++|+++||||++.+
T Consensus       268 ~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~~  300 (360)
T cd05627         268 KDLILRFCT-DSENRIGSNGVEEIKSHPFFEGVD  300 (360)
T ss_pred             HHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCCC
Confidence            999999774 999998   489999999998754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1.6e-42  Score=322.78  Aligned_cols=283  Identities=27%  Similarity=0.494  Sum_probs=205.6

Q ss_pred             hccccccceeEEEEEecC--CCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee--ecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRE--RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD--YRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~--~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~--~~~~~~lv~e  124 (379)
                      .+||+|+||.||+|+++.  ++..||+|.+... .......+|+.++..+     .|+|++++++++.  .+...++++|
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~-~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~lv~e   80 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT-GISMSACREIALLREL-----KHPNVIALQKVFLSHSDRKVWLLFD   80 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCC-CCcHHHHHHHHHHHhC-----CCCCeeeEEEEEeccCCCeEEEEEe
Confidence            589999999999998654  5688999998743 2344567799998888     7799999999885  4567899999


Q ss_pred             CCCCCHHHHHHhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          125 KLGSSLYDFLRKNN-------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       125 ~~~~sL~~~l~~~~-------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      |++++|.+++....       ...+++..+..++.||+.||.|||+.|++||||||+||++...+               
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~---------------  145 (317)
T cd07867          81 YAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG---------------  145 (317)
T ss_pred             eeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCC---------------
Confidence            99889988875321       12478889999999999999999999999999999999994322               


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                              +..+.++|+|||.+.......      ....||..|+|||.+.+ ..++.++|||||||++|+|++|++||.
T Consensus       146 --------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~  217 (317)
T cd07867         146 --------PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  217 (317)
T ss_pred             --------CCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence                    345678899999886543321      23468899999999876 457899999999999999999999997


Q ss_pred             CCch---------HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhh-hhhccchhhHHHHHHhhcc
Q 017021          271 THEN---------LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESI-KSVMKLPRLQNLIMQHVDH  340 (379)
Q Consensus       271 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  340 (379)
                      ....         ......+....+.+....|+.+.........            .... ......+............
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~  285 (317)
T cd07867         218 CRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTL------------QKDFRRTTYANSSLIKYMEKHKVK  285 (317)
T ss_pred             cccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhh------------hhhhcccccCCchhhhhhhcccCC
Confidence            5332         2334445555666666655543322110000            0000 0001111111122222234


Q ss_pred             chhHHHHHHhhccccCCCCCcCHHHHhcCCCC
Q 017021          341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       341 ~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      .+..+.+||.+||+.||.+|||++|+|+||||
T Consensus       286 ~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         286 PDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             CChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            45679999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=1.2e-42  Score=318.34  Aligned_cols=248  Identities=23%  Similarity=0.363  Sum_probs=195.9

Q ss_pred             cccccceeEEEEEecCCCceEEEEEeeccch----hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC
Q 017021           51 MGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  126 (379)
Q Consensus        51 Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~  126 (379)
                      ||+|+||+||++.++.+++.||+|.+.....    ....+..|+.+++.+     +|++++.+.+.+..+...|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~   75 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-----HSRFIVSLAYAFQTKTDLCLVMTIM   75 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-----CCCcEeeeeEEEcCCCeEEEEEeCC
Confidence            6999999999999999999999999864321    223455688888877     7799999999999999999999999


Q ss_pred             -CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          127 -GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       127 -~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                       +++|.+.+...  ....+++..+..++.||+.||.|||+.|++||||||+||++                         
T Consensus        76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili-------------------------  130 (280)
T cd05608          76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL-------------------------  130 (280)
T ss_pred             CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE-------------------------
Confidence             89998887542  22368999999999999999999999999999999999999                         


Q ss_pred             cCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          204 RMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                        +.++.++|+|||.+......   .....||+.|+|||.+.+..++.++|+|||||++|+|++|+.||...........
T Consensus       131 --~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~  208 (280)
T cd05608         131 --DNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE  208 (280)
T ss_pred             --CCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHH
Confidence              44556788888877543222   1234689999999999998999999999999999999999999976432111111


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      +.......+                   .                          ......+..+.+++.+||+.||++|
T Consensus       209 ~~~~~~~~~-------------------~--------------------------~~~~~~~~~~~~li~~~l~~~P~~R  243 (280)
T cd05608         209 LKQRILNDS-------------------V--------------------------TYPDKFSPASKSFCEALLAKDPEKR  243 (280)
T ss_pred             HHHhhcccC-------------------C--------------------------CCcccCCHHHHHHHHHHhcCCHHHh
Confidence            111000000                   0                          0112367789999999999999999


Q ss_pred             c-----CHHHHhcCCCCCCC
Q 017021          361 L-----TAREALRHPFFTRD  375 (379)
Q Consensus       361 p-----ta~e~l~hp~f~~~  375 (379)
                      |     +++++++||||++.
T Consensus       244 ~~~~~~~~~~~l~h~~~~~~  263 (280)
T cd05608         244 LGFRDGNCDGLRTHPLFRDL  263 (280)
T ss_pred             cCCCCCCHHHHhcChhhhcC
Confidence            9     89999999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-42  Score=323.23  Aligned_cols=249  Identities=27%  Similarity=0.355  Sum_probs=201.4

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch---hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      +......+.+.||+|+||+||++.++.+.. ||+|++...+.   ....+.+|+.++.++     .||||+.+++++..+
T Consensus        38 i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~-vavK~~~~~~~~~~~~~~f~~E~~il~~l-----~HpNIV~f~G~~~~~  111 (362)
T KOG0192|consen   38 IDPDELPIEEVLGSGSFGTVYKGKWRGTDV-VAVKIISDPDFDDESRKAFRREASLLSRL-----RHPNIVQFYGACTSP  111 (362)
T ss_pred             cChHHhhhhhhcccCCceeEEEEEeCCcee-EEEEEecchhcChHHHHHHHHHHHHHHhC-----CCCCeeeEEEEEcCC
Confidence            334444566789999999999998765332 99999975332   255888999999998     889999999999988


Q ss_pred             c-eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CcccCCCCCcEEEecccccccCCCccCC
Q 017021          117 N-HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC-MIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       117 ~-~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      . ..++||||+ +|+|.+++.......++...+..++.||+.|++|||+++ ||||||||+|||+               
T Consensus       112 ~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv---------------  176 (362)
T KOG0192|consen  112 PGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILV---------------  176 (362)
T ss_pred             CCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEE---------------
Confidence            8 799999999 999999998843357999999999999999999999999 9999999999999               


Q ss_pred             CCCCCCcccccCCCCC-CeEEeecCcccccCC---CCCcccccCCccchhhhh--CCCCCCccchHhHHHHHHHHHhCCC
Q 017021          194 HTPKDSSYFKRMPKSS-AIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVIL--GLGWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~-~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                                  +.+. .+||+|||+++....   ......||..|+|||++.  ...|+.++||||||+++|||+||+.
T Consensus       177 ------------~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~  244 (362)
T KOG0192|consen  177 ------------DLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEI  244 (362)
T ss_pred             ------------cCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCC
Confidence                        4554 788888888865443   223368999999999999  5689999999999999999999999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ||...........+.... .                    +..+|                          ..+.+.+..
T Consensus       245 Pf~~~~~~~~~~~v~~~~-~--------------------Rp~~p--------------------------~~~~~~l~~  277 (362)
T KOG0192|consen  245 PFEDLAPVQVASAVVVGG-L--------------------RPPIP--------------------------KECPPHLSS  277 (362)
T ss_pred             CCCCCCHHHHHHHHHhcC-C--------------------CCCCC--------------------------ccCCHHHHH
Confidence            999877644433322111 1                    11111                          135678999


Q ss_pred             HHhhccccCCCCCcCHHHHhc
Q 017021          348 LLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~  368 (379)
                      +|..||..||.+||+..+++.
T Consensus       278 l~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  278 LMERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             HHHHhCCCCCCcCCCHHHHHH
Confidence            999999999999999998863

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=8.5e-44  Score=307.62  Aligned_cols=268  Identities=26%  Similarity=0.475  Sum_probs=216.1

Q ss_pred             eeeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           35 ITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        35 ~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      .++.....|...- ++||-|-.|.|-.+.++.||+++|+|++....+    +.+|++.--..    ..|+|||.+++.|+
T Consensus        55 k~~~itedY~is~-qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~K----ARrEVeLHw~~----s~h~~iV~IidVye  125 (400)
T KOG0604|consen   55 KEYSITEDYSISW-QVLGAGINGKVVQCVHKRTQEKFALKVLLDSPK----ARREVELHWMA----SGHPHIVSIIDVYE  125 (400)
T ss_pred             hcccchhhheehh-hhhccccCCceEEEEeccchhhhHHHHHhcCHH----HHhHhhhhhhh----cCCCceEEeehhhh
Confidence            4444444444433 689999999999999999999999999874333    33344432222    37899999999886


Q ss_pred             e----cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCC
Q 017021          115 Y----RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       115 ~----~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                      .    .+.+.+|||.+ ||.|.+.++.++...+++.++..++.||..|+.|||+.+|.||||||+|+|+...        
T Consensus       126 Ns~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t--------  197 (400)
T KOG0604|consen  126 NSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTT--------  197 (400)
T ss_pred             hhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecC--------
Confidence            4    46788999999 9999999999988889999999999999999999999999999999999999543        


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCC
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                                      ..+..+||+|||+|+....+.  .+.+-|+.|.|||++..++|+..+|+||+||++|-|++|.+
T Consensus       198 ----------------~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyP  261 (400)
T KOG0604|consen  198 ----------------SPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP  261 (400)
T ss_pred             ----------------CCCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCC
Confidence                            678889999999998766433  45678999999999999999999999999999999999999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ||++.....           .+..+        +.-+..|.+.+|+                      +.|+..|.+++|
T Consensus       262 PFYS~hg~a-----------ispgM--------k~rI~~gqy~FP~----------------------pEWs~VSe~aKd  300 (400)
T KOG0604|consen  262 PFYSNHGLA-----------ISPGM--------KRRIRTGQYEFPE----------------------PEWSCVSEAAKD  300 (400)
T ss_pred             cccccCCcc-----------CChhH--------HhHhhccCccCCC----------------------hhHhHHHHHHHH
Confidence            998754321           12221        1223334444443                      346678899999


Q ss_pred             HHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          348 LLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +|+.+|..+|.+|.|+.|++.|||+.+.+
T Consensus       301 lIR~LLkt~PteRlTI~~~m~hpwi~~~~  329 (400)
T KOG0604|consen  301 LIRKLLKTEPTERLTIEEVMDHPWINQYE  329 (400)
T ss_pred             HHHHHhcCCchhheeHHHhhcCchhcccc
Confidence            99999999999999999999999998754

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=9.2e-43  Score=326.80  Aligned_cols=295  Identities=21%  Similarity=0.318  Sum_probs=209.6

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ....|++.++||+|+||.||++.++.++..+|+|++...  ......+..|++++..+     +|+|++.+++++..++.
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~   77 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-----NSPYIVGFYGAFYSDGE   77 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-----CCCcccceeEEEEECCE
Confidence            445789999999999999999999999999999998743  22345677899998888     78999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      .++||||+ +++|.+++....  .+++..+..++.|++.||.|||+. +++||||||+||+++                 
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~-----------------  138 (333)
T cd06650          78 ISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN-----------------  138 (333)
T ss_pred             EEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc-----------------
Confidence            99999999 899999997754  588999999999999999999975 799999999999994                 


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCC-CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                                .++.++|+|||.+...... .....||..|+|||.+.+..++.++|+|||||++|+|++|+.||......
T Consensus       139 ----------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~  208 (333)
T cd06650         139 ----------SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK  208 (333)
T ss_pred             ----------CCCCEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh
Confidence                      4456788888877543222 23346899999999999888999999999999999999999999865543


Q ss_pred             HHHHHHHHHc-CCCChhHHHhhhhhhhhhhccCCCCCCCCCC---chhh-hhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          276 EHLAMMERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA---SRES-IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       276 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      +....+.... +........   .... ........+.....   .... .......+.    ........+.++.+||.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~  280 (333)
T cd06650         209 ELELMFGCPVEGDPAESETS---PRPR-PPGRPLSSYGPDSRPPMAIFELLDYIVNEPP----PKLPSGVFGAEFQDFVN  280 (333)
T ss_pred             HHHHHhcCcccCCccccccC---cccC-CccchhhhhcccccccccHHHHHHHHhcCCC----ccCCCCCcCHHHHHHHH
Confidence            3222111111 111000000   0000 00000000000000   0000 000000000    00001135678999999


Q ss_pred             hccccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          351 GLLRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      +||+.||++|||++|++.||||+....
T Consensus       281 ~~L~~~P~~Rpt~~ell~h~~~~~~~~  307 (333)
T cd06650         281 KCLIKNPAERADLKQLMVHAFIKRSEA  307 (333)
T ss_pred             HhccCCcccCcCHHHHhhCHHHhcCcc
Confidence            999999999999999999999987643

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=9.8e-43  Score=331.05  Aligned_cols=259  Identities=24%  Similarity=0.406  Sum_probs=207.0

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      .......|++.+.||+|+||.||+|+++.+++.||+|++....    .....+.+|..++..+     +|++++++++.+
T Consensus        38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-----~hp~iv~~~~~~  112 (371)
T cd05622          38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-----NSPWVVQLFYAF  112 (371)
T ss_pred             cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-----CCCCCCeEEEEE
Confidence            4556678999999999999999999999999999999986422    2233455677777766     789999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      ..++..|+||||+ +++|.+++...   .+++..+..++.||+.||.|||+.||+||||||+||++              
T Consensus       113 ~~~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll--------------  175 (371)
T cd05622         113 QDDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL--------------  175 (371)
T ss_pred             EcCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE--------------
Confidence            9999999999999 89999998764   48899999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCC----CCCccchHhHHHHHHHHHh
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlG~il~~l~~  264 (379)
                                   +.++.++|+|||.+.......    ....||+.|+|||++.+..    ++.++|||||||++|+|++
T Consensus       176 -------------~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~  242 (371)
T cd05622         176 -------------DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV  242 (371)
T ss_pred             -------------CCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHh
Confidence                         455678888888876543321    2456999999999987643    7899999999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |..||.+.+.......+.......                     .++.                        ....+..
T Consensus       243 G~~Pf~~~~~~~~~~~i~~~~~~~---------------------~~~~------------------------~~~~s~~  277 (371)
T cd05622         243 GDTPFYADSLVGTYSKIMNHKNSL---------------------TFPD------------------------DNDISKE  277 (371)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCcc---------------------cCCC------------------------cCCCCHH
Confidence            999998776654444333211111                     1110                        1236778


Q ss_pred             HHHHHhhccccCCCC--CcCHHHHhcCCCCCCCC
Q 017021          345 LTHLLQGLLRYDPTD--RLTAREALRHPFFTRDH  376 (379)
Q Consensus       345 ~~~li~~~L~~dP~~--Rpta~e~l~hp~f~~~~  376 (379)
                      ++++|..||+.++.+  |++++|+++||||++..
T Consensus       278 ~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~  311 (371)
T cd05622         278 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ  311 (371)
T ss_pred             HHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCC
Confidence            999999999844443  78999999999998754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=4.3e-43  Score=327.07  Aligned_cols=244  Identities=28%  Similarity=0.479  Sum_probs=199.8

Q ss_pred             hccccccceeEEEEEe---cCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           49 SKMGEGTFGQVLECWD---RERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~---~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      +.||+|+||.||++++   +.+|+.||+|++....   ........|+.++.++     .|+||+++++.+..++..|+|
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv   76 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEV-----NHPFIVKLHYAFQTEGKLYLI   76 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhC-----CCCCcccEEEEEEcCCEEEEE
Confidence            6799999999999986   3678999999997432   1233455688888877     789999999999999999999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      |||+ +++|.+.+.+..  .+++..+..++.||+.||.|||+.|++||||||+||++                       
T Consensus        77 ~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~-----------------------  131 (318)
T cd05582          77 LDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL-----------------------  131 (318)
T ss_pred             EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEE-----------------------
Confidence            9999 899999997654  68999999999999999999999999999999999999                       


Q ss_pred             cccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  278 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~  278 (379)
                          +.++.++|+|||.+......   .....||+.|+|||.+.+..++.++|||||||++|+|++|+.||...+..+..
T Consensus       132 ----~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~  207 (318)
T cd05582         132 ----DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETM  207 (318)
T ss_pred             ----CCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHH
Confidence                45566888888877643332   12356899999999999888999999999999999999999999876654444


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCC
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  358 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  358 (379)
                      ..+.+.....|                                                 ...+..+.++|++||+.||+
T Consensus       208 ~~i~~~~~~~p-------------------------------------------------~~~~~~~~~li~~~l~~~P~  238 (318)
T cd05582         208 TMILKAKLGMP-------------------------------------------------QFLSPEAQSLLRALFKRNPA  238 (318)
T ss_pred             HHHHcCCCCCC-------------------------------------------------CCCCHHHHHHHHHHhhcCHh
Confidence            33322111111                                                 12467889999999999999


Q ss_pred             CCcC-----HHHHhcCCCCCCC
Q 017021          359 DRLT-----AREALRHPFFTRD  375 (379)
Q Consensus       359 ~Rpt-----a~e~l~hp~f~~~  375 (379)
                      +|||     +.+++.||||...
T Consensus       239 ~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         239 NRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             HcCCCCCCCHHHHhCCCCcCCC
Confidence            9999     7789999999764

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=9.2e-43  Score=325.79  Aligned_cols=245  Identities=26%  Similarity=0.368  Sum_probs=194.6

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.||+|+||.||+|+++.+|+.||+|++....    ........|...+.+    ...|+|++++++.+...+..|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~----~~~hp~iv~~~~~~~~~~~~~lv~e   76 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLK----NVKHPFLVGLHYSFQTTEKLYFVLD   76 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHH----hCCCCCCccEEEEEecCCEEEEEEc
Confidence            46899999999999999999999999997432    122233334333222    1378999999999999999999999


Q ss_pred             CC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          125 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                      |+ +++|...+....  .+++..+..++.||+.||.|||+.|++||||||+||++                         
T Consensus        77 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll-------------------------  129 (325)
T cd05604          77 FVNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL-------------------------  129 (325)
T ss_pred             CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE-------------------------
Confidence            99 899998887654  68999999999999999999999999999999999999                         


Q ss_pred             cCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          204 RMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                        +.++.++|+|||.+.....   ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....
T Consensus       130 --~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~  207 (325)
T cd05604         130 --DSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDN  207 (325)
T ss_pred             --CCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHH
Confidence              4556778888887754221   12345689999999999998899999999999999999999999987665444333


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      +......                                                 .....+..+.++|++||+.||.+|
T Consensus       208 ~~~~~~~-------------------------------------------------~~~~~~~~~~~ll~~ll~~~p~~R  238 (325)
T cd05604         208 ILHKPLV-------------------------------------------------LRPGASLTAWSILEELLEKDRQRR  238 (325)
T ss_pred             HHcCCcc-------------------------------------------------CCCCCCHHHHHHHHHHhccCHHhc
Confidence            2221000                                                 011356678899999999999999


Q ss_pred             cCH----HHHhcCCCCCCC
Q 017021          361 LTA----REALRHPFFTRD  375 (379)
Q Consensus       361 pta----~e~l~hp~f~~~  375 (379)
                      |++    .++++||||+..
T Consensus       239 ~~~~~~~~~i~~h~~f~~~  257 (325)
T cd05604         239 LGAKEDFLEIQEHPFFESL  257 (325)
T ss_pred             CCCCCCHHHHhcCCCcCCC
Confidence            977    599999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=1.2e-42  Score=328.73  Aligned_cols=253  Identities=26%  Similarity=0.421  Sum_probs=196.1

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      -..|++.++||+|+||.||+|++..+++.||+|++...  ......+.+|+.++..+     .|+||+++++++..++.+
T Consensus        73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~  147 (353)
T PLN00034         73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDV-----NHPNVVKCHDMFDHNGEI  147 (353)
T ss_pred             HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhC-----CCCCcceeeeEeccCCeE
Confidence            34578889999999999999999999999999998643  23345677899988887     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      ++||||+ +++|.+.      ....+..+..++.||+.||.|||+.|++||||||+||++                    
T Consensus       148 ~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll--------------------  201 (353)
T PLN00034        148 QVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI--------------------  201 (353)
T ss_pred             EEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE--------------------
Confidence            9999999 8887542      235677888999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhC-----CCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                             +.++.++|+|||.+.......   ....||..|+|||.+..     ...+.++|||||||++|+|++|+.||.
T Consensus       202 -------~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~  274 (353)
T PLN00034        202 -------NSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFG  274 (353)
T ss_pred             -------cCCCCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence                   455567777777775433221   23578999999998743     234578999999999999999999997


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      .....+....+.......+                                             .......+.++.+||.
T Consensus       275 ~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~l~~li~  309 (353)
T PLN00034        275 VGRQGDWASLMCAICMSQP---------------------------------------------PEAPATASREFRHFIS  309 (353)
T ss_pred             CCCCccHHHHHHHHhccCC---------------------------------------------CCCCCccCHHHHHHHH
Confidence            4322111111111000000                                             0001235678999999


Q ss_pred             hccccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          351 GLLRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      +||+.||++|||+.|+++||||.....
T Consensus       310 ~~l~~~P~~Rpt~~ell~hp~~~~~~~  336 (353)
T PLN00034        310 CCLQREPAKRWSAMQLLQHPFILRAQP  336 (353)
T ss_pred             HHccCChhhCcCHHHHhcCcccccCCc
Confidence            999999999999999999999998753

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=4.4e-43  Score=316.84  Aligned_cols=252  Identities=35%  Similarity=0.581  Sum_probs=202.5

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHh---HHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA---AMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~---~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      |++.++||+|+||+||++.++.+++.||+|++.........   ...|+..+..+     .|++++++.+++......++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l-----~~~~i~~~~~~~~~~~~~~~   75 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRL-----RHPNIVQILDVFQDDNYLYI   75 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHH-----TBTTBCHEEEEEEESSEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccc-----cccccccccccccccccccc
Confidence            78889999999999999999999999999999855433322   23488888888     67899999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +||++ +++|.+++....  .++...+..++.|++.||.+||+.|++|+||||+||++                      
T Consensus        76 v~~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~----------------------  131 (260)
T PF00069_consen   76 VMEYCPGGSLQDYLQKNK--PLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL----------------------  131 (260)
T ss_dssp             EEEEETTEBHHHHHHHHS--SBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE----------------------
T ss_pred             cccccccccccccccccc--cccccccccccccccccccccccccccccccccccccc----------------------
Confidence            99999 669999998443  68999999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCccccc---CCCCCcccccCCccchhhhh-CCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYE---RPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~---~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                           +.++.++|+|||.+...   ........+|..|.|||.+. +..++.++|+||||+++|+|++|..||......+
T Consensus       132 -----~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~  206 (260)
T PF00069_consen  132 -----DENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD  206 (260)
T ss_dssp             -----STTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH
T ss_pred             -----ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence                 55667788888887642   22223456889999999998 7788999999999999999999999998764333


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.+.........                                          ..........+.++|.+||+.|
T Consensus       207 ~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~l~~li~~~l~~~  244 (260)
T PF00069_consen  207 QLEIIEKILKRPLPSS------------------------------------------SQQSREKSEELRDLIKKMLSKD  244 (260)
T ss_dssp             HHHHHHHHHHTHHHHH------------------------------------------TTSHTTSHHHHHHHHHHHSSSS
T ss_pred             hhhhhhhccccccccc------------------------------------------ccccchhHHHHHHHHHHHccCC
Confidence            3333332221110000                                          0000112378999999999999


Q ss_pred             CCCCcCHHHHhcCCCC
Q 017021          357 PTDRLTAREALRHPFF  372 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f  372 (379)
                      |++|||+.++++||||
T Consensus       245 p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  245 PEQRPSAEELLKHPWF  260 (260)
T ss_dssp             GGGSTTHHHHHTSGGG
T ss_pred             hhHCcCHHHHhcCCCC
Confidence            9999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=3.2e-42  Score=322.35  Aligned_cols=250  Identities=23%  Similarity=0.395  Sum_probs=195.0

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.||+|+||.||+|+++.+++.||+|+++...    .....+..|..++.++    .+|++++.+++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~----~~~~~i~~~~~~~~~~~~~~lv~e   76 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQA----SSNPFLVGLHSCFQTTSRLFLVIE   76 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhh----cCCCCEeeEEEEEEeCCEEEEEEe
Confidence            46899999999999999999999999997432    2223445666666655    357899999999999999999999


Q ss_pred             CC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          125 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                      |+ +++|...+....  .+++..+..++.||+.||+|||+.|++||||||+||++                         
T Consensus        77 ~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili-------------------------  129 (327)
T cd05617          77 YVNGGDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL-------------------------  129 (327)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE-------------------------
Confidence            99 999998887654  69999999999999999999999999999999999999                         


Q ss_pred             cCCCCCCeEEeecCcccccC---CCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH---H
Q 017021          204 RMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE---H  277 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~---~  277 (379)
                        +.++.++|+|||.+....   .......||+.|+|||++.+..++.++|||||||++|+|++|..||.......   .
T Consensus       130 --~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~  207 (327)
T cd05617         130 --DADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNT  207 (327)
T ss_pred             --eCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccccc
Confidence              445567888888775321   11234578999999999999899999999999999999999999996422110   0


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.+.                   +.......                          ....+..+.++|.+||+.||
T Consensus       208 ~~~~~~~-------------------~~~~~~~~--------------------------p~~~~~~~~~li~~~L~~dP  242 (327)
T cd05617         208 EDYLFQV-------------------ILEKPIRI--------------------------PRFLSVKASHVLKGFLNKDP  242 (327)
T ss_pred             HHHHHHH-------------------HHhCCCCC--------------------------CCCCCHHHHHHHHHHhccCH
Confidence            0000000                   00000011                          12356788999999999999


Q ss_pred             CCCcC------HHHHhcCCCCCCCC
Q 017021          358 TDRLT------AREALRHPFFTRDH  376 (379)
Q Consensus       358 ~~Rpt------a~e~l~hp~f~~~~  376 (379)
                      ++|++      +.++++||||+...
T Consensus       243 ~~R~~~~~~~~~~~i~~h~~f~~~~  267 (327)
T cd05617         243 KERLGCQPQTGFSDIKSHTFFRSID  267 (327)
T ss_pred             HHcCCCCCCCCHHHHHcCCCCCCCC
Confidence            99998      47999999998753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-42  Score=315.91  Aligned_cols=329  Identities=33%  Similarity=0.592  Sum_probs=246.8

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCC---CeeEEecceee
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG---NRCVQIRNWFD  114 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~---~~i~~~~~~~~  114 (379)
                      -+|..-+|-+.++||=|.|++||+|+|..+.+.||+|+.+......+.++.|+.++++++.++.++   ..||++++.|.
T Consensus        73 D~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fk  152 (590)
T KOG1290|consen   73 DVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFK  152 (590)
T ss_pred             ccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccce
Confidence            356667889999999999999999999999999999999988888899999999999999888544   46999999998


Q ss_pred             e----cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCCcccCCCCCcEEEecc--------
Q 017021          115 Y----RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-DLCMIHTDLKPENVLLVSS--------  181 (379)
Q Consensus       115 ~----~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~iiH~dlkp~Nili~~~--------  181 (379)
                      .    +.|+|+|+|+.|.+|..++.....+.++...+..|+.||+.||.||| ++||||.||||+|||+-..        
T Consensus       153 hsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~~~~~  232 (590)
T KOG1290|consen  153 HSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDPAKDA  232 (590)
T ss_pred             ecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccchhhhh
Confidence            4    46999999999999999999888788999999999999999999999 6899999999999998542        


Q ss_pred             ---c--ccccC--------CCc-c---------C----------------------------------------CCCCCC
Q 017021          182 ---E--YIKVP--------DYK-S---------S----------------------------------------LHTPKD  198 (379)
Q Consensus       182 ---~--~~~~~--------~~~-~---------~----------------------------------------~~~~~~  198 (379)
                         +  ....+        +-+ .         +                                        ...+..
T Consensus       233 ~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~  312 (590)
T KOG1290|consen  233 REAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGN  312 (590)
T ss_pred             hhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCcc
Confidence               1  00000        000 0         0                                        000000


Q ss_pred             -----------------------Cc------c---------------------cc------------------cCCCCCC
Q 017021          199 -----------------------SS------Y---------------------FK------------------RMPKSSA  210 (379)
Q Consensus       199 -----------------------~~------~---------------------~~------------------~~~~~~~  210 (379)
                                             .+      +                     ..                  ....+..
T Consensus       313 ~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~  392 (590)
T KOG1290|consen  313 ESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIR  392 (590)
T ss_pred             ccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCcccee
Confidence                                   00      0                     00                  0112245


Q ss_pred             eEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC------chHHHHHHHHHH
Q 017021          211 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH------ENLEHLAMMERV  284 (379)
Q Consensus       211 ~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~------~~~~~~~~~~~~  284 (379)
                      +||+|||.|......-..-..|..|.|||++.+.+|+..+||||++|++|||+||.+.|...      .+.+...++.+.
T Consensus       393 vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~EL  472 (590)
T KOG1290|consen  393 VKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMEL  472 (590)
T ss_pred             EEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHH
Confidence            89999999987776665567899999999999999999999999999999999999999643      356677889999


Q ss_pred             cCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHH--hhccchhHHHHHHhhccccCCCCCcC
Q 017021          285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ--HVDHSAGDLTHLLQGLLRYDPTDRLT  362 (379)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt  362 (379)
                      +|..|..+.-.-.-+-+-+..+|.+..-....         .-|...-+.+.  .......++.+|+.-||+.+|++|||
T Consensus       473 LG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK---------~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~t  543 (590)
T KOG1290|consen  473 LGKIPRKIALGGKYSRDFFNRRGELRHIRRLK---------PWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPT  543 (590)
T ss_pred             HhhccHHHHhcCcchHhhhccccceecccccC---------CCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCcccccc
Confidence            99999876544333222233333222111110         00111111111  11345577999999999999999999


Q ss_pred             HHHHhcCCCCCCC
Q 017021          363 AREALRHPFFTRD  375 (379)
Q Consensus       363 a~e~l~hp~f~~~  375 (379)
                      |.++|+|||+...
T Consensus       544 A~~cl~hPwLn~~  556 (590)
T KOG1290|consen  544 AAQCLKHPWLNPV  556 (590)
T ss_pred             HHHHhcCccccCC
Confidence            9999999999843

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.9e-43  Score=327.35  Aligned_cols=246  Identities=26%  Similarity=0.447  Sum_probs=193.1

Q ss_pred             cccccceeEEEEEecCCCceEEEEEeeccch----hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC
Q 017021           51 MGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  126 (379)
Q Consensus        51 Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~  126 (379)
                      ||+|+||+||+|+++.+++.||+|++.....    .......|..++....  ...|++++.+++.+......|+||||+
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~--~~~~p~i~~~~~~~~~~~~~~lv~e~~   78 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTL--LDESPFIVGLKFSFQTDSDLYLVTDYM   78 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhc--cCCCCcCcceEEEEecCCeEEEEEcCC
Confidence            7999999999999999999999999964321    1122333444444432  126799999999999999999999999


Q ss_pred             -CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccC
Q 017021          127 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  205 (379)
Q Consensus       127 -~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (379)
                       +++|.+.+....  .+++..+..++.||+.||+|||+.||+||||||+||++                           
T Consensus        79 ~~g~L~~~l~~~~--~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili---------------------------  129 (330)
T cd05586          79 SGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL---------------------------  129 (330)
T ss_pred             CCChHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---------------------------
Confidence             899999887654  68999999999999999999999999999999999999                           


Q ss_pred             CCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHH
Q 017021          206 PKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM  281 (379)
Q Consensus       206 ~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~  281 (379)
                      +.++.++|+|||.+.....   ......||..|+|||.+.+. .++.++|||||||++|+|++|..||...+..+....+
T Consensus       130 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i  209 (330)
T cd05586         130 DATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNI  209 (330)
T ss_pred             CCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHH
Confidence            4555678888887754222   12345689999999998764 4789999999999999999999999876554433322


Q ss_pred             HHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCc
Q 017021          282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  361 (379)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  361 (379)
                      .......                       +.                         ...+.++.++|.+||+.||.+||
T Consensus       210 ~~~~~~~-----------------------~~-------------------------~~~~~~~~~li~~~L~~~P~~R~  241 (330)
T cd05586         210 AFGKVRF-----------------------PK-------------------------NVLSDEGRQFVKGLLNRNPQHRL  241 (330)
T ss_pred             HcCCCCC-----------------------CC-------------------------ccCCHHHHHHHHHHcCCCHHHCC
Confidence            2111111                       10                         12467889999999999999998


Q ss_pred             ----CHHHHhcCCCCCCC
Q 017021          362 ----TAREALRHPFFTRD  375 (379)
Q Consensus       362 ----ta~e~l~hp~f~~~  375 (379)
                          ++.++++||||++.
T Consensus       242 ~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         242 GAHRDAVELKEHPFFADI  259 (330)
T ss_pred             CCCCCHHHHhcCccccCC
Confidence                79999999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=2e-42  Score=323.48  Aligned_cols=244  Identities=26%  Similarity=0.409  Sum_probs=194.1

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccch----hhHhHHHHHHH-HHHHHhcCCCCCeeEEecceeeecceEEEEE
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEV-LQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  123 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~e~~~-l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~  123 (379)
                      +.||+|+||.||+|+++.+++.||+|++.....    .......|... +..+     .|++++++++.+...+..|+||
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-----~h~~Iv~~~~~~~~~~~~~lv~   75 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-----KHPFLVGLHFSFQTADKLYFVL   75 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC-----CCCCCCceeEEEEcCCeEEEEE
Confidence            468999999999999999999999999974321    11222233322 2233     7899999999999999999999


Q ss_pred             eCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          124 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       124 e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      ||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++                        
T Consensus        76 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili------------------------  129 (325)
T cd05602          76 DYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL------------------------  129 (325)
T ss_pred             eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE------------------------
Confidence            999 899999997754  58889999999999999999999999999999999999                        


Q ss_pred             ccCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHH
Q 017021          203 KRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  279 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~  279 (379)
                         +.++.++|+|||.+.....   ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+...
T Consensus       130 ---~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  206 (325)
T cd05602         130 ---DSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD  206 (325)
T ss_pred             ---CCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHH
Confidence               4555678888887753221   1234568999999999999899999999999999999999999998766554443


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                      .+......                                                 .....+..+.++|.+||+.||.+
T Consensus       207 ~i~~~~~~-------------------------------------------------~~~~~~~~~~~li~~~l~~~p~~  237 (325)
T cd05602         207 NILNKPLQ-------------------------------------------------LKPNITNSARHLLEGLLQKDRTK  237 (325)
T ss_pred             HHHhCCcC-------------------------------------------------CCCCCCHHHHHHHHHHcccCHHH
Confidence            33221100                                                 11235678999999999999999


Q ss_pred             CcCHH----HHhcCCCCCCC
Q 017021          360 RLTAR----EALRHPFFTRD  375 (379)
Q Consensus       360 Rpta~----e~l~hp~f~~~  375 (379)
                      |+++.    ++++|+||...
T Consensus       238 R~~~~~~~~~i~~~~~~~~~  257 (325)
T cd05602         238 RLGAKDDFMEIKNHIFFSPI  257 (325)
T ss_pred             CCCCCCCHHHHhcCcccCCC
Confidence            99876    89999999754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=2.9e-42  Score=315.16  Aligned_cols=251  Identities=23%  Similarity=0.412  Sum_probs=196.7

Q ss_pred             cccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC
Q 017021           51 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  126 (379)
Q Consensus        51 Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~  126 (379)
                      ||+|+||.||+++++.+|+.||+|.+....    ........|++++..+     +|++++.+.+.++.+.+.|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-----~hp~i~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-----NSPFIVNLAYAFESKTHLCLVMSLM   75 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-----CCCcEEEEEEEEecCCeEEEEEecC
Confidence            699999999999999999999999986321    1233445688888887     7799999999999999999999999


Q ss_pred             -CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccC
Q 017021          127 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  205 (379)
Q Consensus       127 -~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (379)
                       +++|.+++.......+++..+..++.|++.||+|||+.|++||||||+||++                           
T Consensus        76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---------------------------  128 (277)
T cd05607          76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLL---------------------------  128 (277)
T ss_pred             CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEE---------------------------
Confidence             8999988876554568899999999999999999999999999999999999                           


Q ss_pred             CCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHH
Q 017021          206 PKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER  283 (379)
Q Consensus       206 ~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~  283 (379)
                      +.+..++|+|||.+.......  ....||..|+|||++.+..++.++|+|||||++|+|++|+.||...........+.+
T Consensus       129 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~  208 (277)
T cd05607         129 DDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKR  208 (277)
T ss_pred             cCCCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHH
Confidence            445567788888765433222  234688999999999888899999999999999999999999975432111111111


Q ss_pred             HcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCH
Q 017021          284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  363 (379)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta  363 (379)
                      ....                   .....                         .....+.+++++|++||+.||.+||++
T Consensus       209 ~~~~-------------------~~~~~-------------------------~~~~~~~~~~~li~~~L~~~P~~R~~~  244 (277)
T cd05607         209 RTLE-------------------DEVKF-------------------------EHQNFTEESKDICRLFLAKKPEDRLGS  244 (277)
T ss_pred             Hhhc-------------------ccccc-------------------------ccccCCHHHHHHHHHHhccCHhhCCCC
Confidence            0000                   00000                         011356789999999999999999999


Q ss_pred             ----HHHhcCCCCCCCCc
Q 017021          364 ----REALRHPFFTRDHL  377 (379)
Q Consensus       364 ----~e~l~hp~f~~~~~  377 (379)
                          ++++.||||+..+.
T Consensus       245 ~~~~~~~~~h~~f~~~~~  262 (277)
T cd05607         245 REKNDDPRKHEFFKTINF  262 (277)
T ss_pred             ccchhhhhcChhhcCCCH
Confidence                77889999987653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=5.9e-42  Score=313.98  Aligned_cols=277  Identities=32%  Similarity=0.512  Sum_probs=216.6

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      +|++.+.||.|++|.||+|+++.+++.||+|++....   .....+..|++++.++     .|+|++++++++.+++..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~   75 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHPNIVKLLDVIHTENKLY   75 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhc-----CCCCCcchhhhcccCCcEE
Confidence            3788899999999999999999999999999986432   1234567789988888     7799999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +||||+.++|.+++.......+++..+..++.|++.||+|||+.|++||||+|+||+++                     
T Consensus        76 ~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~---------------------  134 (284)
T cd07860          76 LVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---------------------  134 (284)
T ss_pred             EEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---------------------
Confidence            99999977899998775545789999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCC-CCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            .++.++|+|||.+.......   ....++..|+|||.+.+.. ++.++|+|||||++|+|++|+.||.+.+..+
T Consensus       135 ------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~  208 (284)
T cd07860         135 ------TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID  208 (284)
T ss_pred             ------CCCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence                  45567777777665332221   2234678899999876644 5889999999999999999999999888777


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ...++.+..+.++...++.+............  +.                  ...........+.+++++|.+||+.|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------------------~~~~~~~~~~~~~~~~~li~~~l~~~  268 (284)
T cd07860         209 QLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPK--WA------------------RQDFSKVVPPLDEDGRDLLSQMLHYD  268 (284)
T ss_pred             HHHHHHHHhCCCChhhhhhhhHHHHHHhhccc--cc------------------ccCHHHHcccCCHHHHHHHHHhcCCC
Confidence            77777777777776666543332111111000  00                  00011112345678999999999999


Q ss_pred             CCCCcCHHHHhcCCCC
Q 017021          357 PTDRLTAREALRHPFF  372 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f  372 (379)
                      |++|||++++++||||
T Consensus       269 P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         269 PNKRISAKAALAHPFF  284 (284)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.5e-42  Score=321.47  Aligned_cols=260  Identities=26%  Similarity=0.435  Sum_probs=206.2

Q ss_pred             eeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEee---ccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           36 TYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        36 ~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~---~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      ..+...+..|+++++||+||.+.||++.... .+.||+|.+.   .+......+..|+..|.++.    ++.+|+.++++
T Consensus       354 ~~i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLk----g~~~IIqL~DY  428 (677)
T KOG0596|consen  354 EIIKVKGREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLK----GHDKIIQLYDY  428 (677)
T ss_pred             eeEEECcchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhc----CCceEEEEeee
Confidence            4566788899999999999999999998544 4567777764   34445567788999999994    55789999999


Q ss_pred             eeecceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          113 FDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       113 ~~~~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      ...++.+|+|||+-..+|..++.++.. .++.-.++.+..|++.|+.++|.+||||.||||.|+++              
T Consensus       429 Ev~d~~lYmvmE~Gd~DL~kiL~k~~~-~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl--------------  493 (677)
T KOG0596|consen  429 EVTDGYLYMVMECGDIDLNKILKKKKS-IDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL--------------  493 (677)
T ss_pred             eccCceEEEEeecccccHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE--------------
Confidence            999999999999999999999998762 34444888999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCC-----------CCCCccchHhHH
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGL-----------GWTYPCDIWSVG  256 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwSlG  256 (379)
                                    ..+.+||+|||.|....+..     ...+||+.||+||.+...           +.+.++||||||
T Consensus       494 --------------VkG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLG  559 (677)
T KOG0596|consen  494 --------------VKGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLG  559 (677)
T ss_pred             --------------EeeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhh
Confidence                          45789999999998766665     346899999999998532           267899999999


Q ss_pred             HHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHH
Q 017021          257 CILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ  336 (379)
Q Consensus       257 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (379)
                      ||||+|+.|+.||.....  ....+..+..|..                  .+.+|..                      
T Consensus       560 CILYqMvYgktPf~~~~n--~~aKl~aI~~P~~------------------~Iefp~~----------------------  597 (677)
T KOG0596|consen  560 CILYQMVYGKTPFGQIIN--QIAKLHAITDPNH------------------EIEFPDI----------------------  597 (677)
T ss_pred             hHHHHHHhcCCchHHHHH--HHHHHHhhcCCCc------------------cccccCC----------------------
Confidence            999999999999964221  1222222222211                  1111110                      


Q ss_pred             hhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       337 ~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                         ....++.+++..||++||.+|||+.++|+|||++-
T Consensus       598 ---~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  598 ---PENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             ---CCchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence               11233999999999999999999999999999875

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-43  Score=305.53  Aligned_cols=272  Identities=26%  Similarity=0.461  Sum_probs=213.9

Q ss_pred             hhhh-hccccccceeEEEEEecCCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           45 DKIH-SKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        45 y~i~-~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      |++. +.||+|+|+.|-.+.+..||..||+|++.+. ...+.+..+|++.+.+.    .+|+||+.++++|+++..+|+|
T Consensus        79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~C----qgh~nilqLiefFEdd~~FYLV  154 (463)
T KOG0607|consen   79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQC----QGHKNILQLIEFFEDDTRFYLV  154 (463)
T ss_pred             HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHh----cCCccHHHHHHHhcccceEEEE
Confidence            4543 5899999999999999999999999999754 34567788899988776    4789999999999999999999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      ||-+ ||+|.+.+.++.  .+++.++..++.+|+.||.|||.+||.|||+||+|||.-..                    
T Consensus       155 fEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~p--------------------  212 (463)
T KOG0607|consen  155 FEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESP--------------------  212 (463)
T ss_pred             EecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCC--------------------
Confidence            9999 999999998765  59999999999999999999999999999999999999432                    


Q ss_pred             cccCCCCCCeEEeecCcccc----------cCCCCCcccccCCccchhhhh-----CCCCCCccchHhHHHHHHHHHhCC
Q 017021          202 FKRMPKSSAIKVIDFGSTTY----------ERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~----------~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~~l~~g~  266 (379)
                          +.-..+|||||.+..-          ..++-.+.+|+..|||||+..     ...|+.++|.||||+|+|-|++|.
T Consensus       213 ----n~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGY  288 (463)
T KOG0607|consen  213 ----NKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGY  288 (463)
T ss_pred             ----CCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCC
Confidence                4556789999876531          111224568999999999874     235899999999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      +||.+.-..+        -|=.-.+.....+.-+-.-++.|++.+|+                      +-|.+.+.+++
T Consensus       289 pPFvG~Cg~d--------CGWdrGe~Cr~CQ~~LFesIQEGkYeFPd----------------------kdWahIS~eak  338 (463)
T KOG0607|consen  289 PPFVGHCGAD--------CGWDRGEVCRVCQNKLFESIQEGKYEFPD----------------------KDWAHISSEAK  338 (463)
T ss_pred             CCccCccCCc--------CCccCCCccHHHHHHHHHHHhccCCcCCh----------------------hhhHHhhHHHH
Confidence            9997642200        00000111111222233334455555543                      34667899999


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      |+|+.+|..|+.+|.+|.++++|||+.+-.
T Consensus       339 dlisnLlvrda~~rlsa~~vlnhPw~~~~~  368 (463)
T KOG0607|consen  339 DLISNLLVRDAKQRLSAAQVLNHPWVQRCA  368 (463)
T ss_pred             HHHHHHHhccHHhhhhhhhccCCccccccc
Confidence            999999999999999999999999998753

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=2.8e-42  Score=321.96  Aligned_cols=244  Identities=26%  Similarity=0.366  Sum_probs=192.8

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccch----hhHhHHHHHHH-HHHHHhcCCCCCeeEEecceeeecceEEEEE
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEV-LQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  123 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~e~~~-l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~  123 (379)
                      +.||+|+||.||+|+++.+++.||+|++.....    ....+..|... +..+     .|+|++++++.+...+..|+||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-----~h~~iv~~~~~~~~~~~~~lv~   75 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL-----KHPFLVGLHYSFQTAEKLYFVL   75 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC-----CCCCccceeeEEEcCCEEEEEE
Confidence            468999999999999999999999999874321    12223333332 3333     7899999999999999999999


Q ss_pred             eCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          124 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       124 e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      ||+ +++|...+....  .+++..+..++.||+.||.|||+.||+||||||+||++                        
T Consensus        76 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll------------------------  129 (321)
T cd05603          76 DYVNGGELFFHLQRER--CFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL------------------------  129 (321)
T ss_pred             cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE------------------------
Confidence            999 899988887654  68899999999999999999999999999999999999                        


Q ss_pred             ccCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHH
Q 017021          203 KRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  279 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~  279 (379)
                         +.++.++|+|||.+.....   ......||+.|+|||.+.+..++.++|||||||++|+|++|..||...+......
T Consensus       130 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  206 (321)
T cd05603         130 ---DSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYD  206 (321)
T ss_pred             ---CCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHH
Confidence               4556678888887654211   1233468999999999998889999999999999999999999998765444333


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                      .+......                                                 .....+..+.++|.+||+.||.+
T Consensus       207 ~i~~~~~~-------------------------------------------------~~~~~~~~~~~li~~~l~~~p~~  237 (321)
T cd05603         207 NILHKPLQ-------------------------------------------------LPGGKTVAACDLLVGLLHKDQRR  237 (321)
T ss_pred             HHhcCCCC-------------------------------------------------CCCCCCHHHHHHHHHHccCCHhh
Confidence            22211101                                                 11235668999999999999999


Q ss_pred             CcCH----HHHhcCCCCCCC
Q 017021          360 RLTA----REALRHPFFTRD  375 (379)
Q Consensus       360 Rpta----~e~l~hp~f~~~  375 (379)
                      ||++    .++++||||...
T Consensus       238 R~~~~~~~~~~~~~~~~~~~  257 (321)
T cd05603         238 RLGAKADFLEIKNHVFFSPI  257 (321)
T ss_pred             cCCCCCCHHHHhCCCCcCCC
Confidence            9976    499999999754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.1e-42  Score=330.19  Aligned_cols=278  Identities=23%  Similarity=0.408  Sum_probs=206.7

Q ss_pred             hhhhhhhhccccccceeEEEEEec--CCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDR--ERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ...|++.+.||+|+||.||+|...  .++..||+|.+....    ...+|+.++..+     .|++++++++.+......
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~----~~~~E~~il~~l-----~h~~iv~~~~~~~~~~~~  161 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK----TPGREIDILKTI-----SHRAIINLIHAYRWKSTV  161 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc----cHHHHHHHHHhc-----CCCCccceeeeEeeCCEE
Confidence            446999999999999999999754  456889999986432    335689999888     789999999999999999


Q ss_pred             EEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       120 ~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      |++||+++++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++                     
T Consensus       162 ~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill---------------------  218 (392)
T PHA03207        162 CMVMPKYKCDLFTYVDRSG--PLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL---------------------  218 (392)
T ss_pred             EEEehhcCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---------------------
Confidence            9999999889999985543  68999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                            +..+.++|+|||.+.......     ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+...
T Consensus       219 ------~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~  292 (392)
T PHA03207        219 ------DEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQV  292 (392)
T ss_pred             ------cCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCC
Confidence                  455567777777765433221     234689999999999988899999999999999999999999976532


Q ss_pred             ---HHHHHHHHHHcCCCChhHH----HhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          275 ---LEHLAMMERVLGPLPQHML----KRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       275 ---~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                         ......+.+..+..+....    ..+......+.......++              .+.   .  ......+.++.+
T Consensus       293 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~---~--~~~~~~~~~~~~  353 (392)
T PHA03207        293 KSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYT--------------IPP---V--IRKYGMHMDVEY  353 (392)
T ss_pred             CCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCcc--------------ccc---h--hhccCcchhHHH
Confidence               2333334443333322111    1111111111111111000              000   0  001134567899


Q ss_pred             HHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          348 LLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +|.+||+.||++||||.|+|+||||....
T Consensus       354 li~~ml~~dp~~Rpsa~e~l~~p~f~~~~  382 (392)
T PHA03207        354 LIAKMLTFDQEFRPSAQDILSLPLFTKEP  382 (392)
T ss_pred             HHHHHhccChhhCCCHHHHhhCchhhccc
Confidence            99999999999999999999999998653

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-43  Score=329.11  Aligned_cols=256  Identities=25%  Similarity=0.358  Sum_probs=223.1

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch----hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      .+...|.=++.||.|+||.||-|++..+.+.||||+++...+    .-..+.+|+..++++     .|||.+.+.++|-.
T Consensus        23 DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l-----~HPntieYkgCyLr   97 (948)
T KOG0577|consen   23 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL-----RHPNTIEYKGCYLR   97 (948)
T ss_pred             CHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhc-----cCCCcccccceeec
Confidence            345566677999999999999999999999999999974322    235678899999999     78999999999999


Q ss_pred             cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          116 RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       116 ~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      +...|+|||||-||..|++.-.. +++.+..+..|+.+.++||+|||+.+.||||||..|||+                 
T Consensus        98 e~TaWLVMEYClGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILL-----------------  159 (948)
T KOG0577|consen   98 EHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILL-----------------  159 (948)
T ss_pred             cchHHHHHHHHhccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEe-----------------
Confidence            99999999999888888887654 468999999999999999999999999999999999999                 


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC---CCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                ...+.+||+|||.|....+- ++++|||.|||||++..   ..|+-++||||||+++.+|+.+++|+-..
T Consensus       160 ----------se~g~VKLaDFGSAsi~~PA-nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM  228 (948)
T KOG0577|consen  160 ----------SEPGLVKLADFGSASIMAPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM  228 (948)
T ss_pred             ----------cCCCeeeeccccchhhcCch-hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc
Confidence                      66778899999988765543 56789999999999864   45999999999999999999999999999


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+.++.|.+...|.-.                                               ..+++..++.||..|
T Consensus       229 NAMSALYHIAQNesPtLq-----------------------------------------------s~eWS~~F~~Fvd~C  261 (948)
T KOG0577|consen  229 NAMSALYHIAQNESPTLQ-----------------------------------------------SNEWSDYFRNFVDSC  261 (948)
T ss_pred             hHHHHHHHHHhcCCCCCC-----------------------------------------------CchhHHHHHHHHHHH
Confidence            999999988887655421                                               135788999999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      |++=|.+|||++++|+|+|+.++.
T Consensus       262 LqKipqeRptse~ll~H~fv~R~R  285 (948)
T KOG0577|consen  262 LQKIPQERPTSEELLKHRFVLRER  285 (948)
T ss_pred             HhhCcccCCcHHHHhhcchhccCC
Confidence            999999999999999999998753

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=3.5e-42  Score=315.97  Aligned_cols=258  Identities=24%  Similarity=0.375  Sum_probs=206.1

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      +|++.+.||+|+||+||+|.+..+++.||+|++....    ........|+.++..+     .|++++.+.+.+..++..
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-----~~~~i~~~~~~~~~~~~~   75 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-----NSQFVVNLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-----CCcCceeEEEEEecCCEE
Confidence            3667789999999999999999999999999986432    2223456788888887     678999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      +++|||+ +++|.+.+.......+++..+..++.|++.||.|||+.||+||||||+||++                    
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili--------------------  135 (285)
T cd05632          76 CLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILL--------------------  135 (285)
T ss_pred             EEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE--------------------
Confidence            9999999 8899988876544469999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                             +.+..++|+|||.+.......  ....|+..|+|||.+.+..++.++|+|||||++|+|++|..||.......
T Consensus       136 -------~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~  208 (285)
T cd05632         136 -------DDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV  208 (285)
T ss_pred             -------CCCCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                   445568888888775432211  23468999999999988889999999999999999999999998655433


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+........                   .                          ......+.++.+|+..||+.|
T Consensus       209 ~~~~~~~~~~~~~-------------------~--------------------------~~~~~~~~~~~~li~~~l~~~  243 (285)
T cd05632         209 KREEVDRRVLETE-------------------E--------------------------VYSAKFSEEAKSICKMLLTKD  243 (285)
T ss_pred             HHHHHHHhhhccc-------------------c--------------------------ccCccCCHHHHHHHHHHccCC
Confidence            3222221111000                   0                          011235678899999999999


Q ss_pred             CCCCcC-----HHHHhcCCCCCCCCcC
Q 017021          357 PTDRLT-----AREALRHPFFTRDHLR  378 (379)
Q Consensus       357 P~~Rpt-----a~e~l~hp~f~~~~~~  378 (379)
                      |++||+     +++++.||||....++
T Consensus       244 P~~R~~~~~~~~~~l~~~~~~~~~~~~  270 (285)
T cd05632         244 PKQRLGCQEEGAGEVKRHPFFRNMNFK  270 (285)
T ss_pred             HhHcCCCcccChHHHHcChhhhcCCHH
Confidence            999999     8999999999886543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-42  Score=321.06  Aligned_cols=252  Identities=24%  Similarity=0.307  Sum_probs=211.1

Q ss_pred             eeeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           35 ITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        35 ~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      .....+....++++++||+|.||.||.|++..+ ..||+|.++...-....+.+|++++.++     .|++++++++++.
T Consensus       198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~~~~f~~Ea~iMk~L-----~H~~lV~l~gV~~  271 (468)
T KOG0197|consen  198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMSPEAFLREAQIMKKL-----RHEKLVKLYGVCT  271 (468)
T ss_pred             cCCeeecHHHHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccChhHHHHHHHHHHhC-----cccCeEEEEEEEe
Confidence            445677888899999999999999999988654 3699999986666667888999999999     8899999999999


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      .++-+||||||+ .|+|.+++....+..+...+.+.++.||++|++||+++++|||||-.+|||++              
T Consensus       272 ~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~--------------  337 (468)
T KOG0197|consen  272 KQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVD--------------  337 (468)
T ss_pred             cCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeec--------------
Confidence            988999999999 99999999986666899999999999999999999999999999999999995              


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCCC-cc---cccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-YI---VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL  268 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~-~~---~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~p  268 (379)
                                   .+..+||+|||+|+....+.- ..   .-...|.|||.+....++.+|||||||++||||+| |+.|
T Consensus       338 -------------~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~p  404 (468)
T KOG0197|consen  338 -------------EDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVP  404 (468)
T ss_pred             -------------cCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCC
Confidence                         445566666666663222211 01   11346999999999999999999999999999998 9999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |.+.+..+....+.+...-+                      -                          ++.+++++.++
T Consensus       405 y~~msn~ev~~~le~GyRlp----------------------~--------------------------P~~CP~~vY~l  436 (468)
T KOG0197|consen  405 YPGMSNEEVLELLERGYRLP----------------------R--------------------------PEGCPDEVYEL  436 (468)
T ss_pred             CCCCCHHHHHHHHhccCcCC----------------------C--------------------------CCCCCHHHHHH
Confidence            99998888887776643211                      1                          12478899999


Q ss_pred             HhhccccCCCCCcCHHHHh
Q 017021          349 LQGLLRYDPTDRLTAREAL  367 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l  367 (379)
                      +..||..+|++|||.+.+.
T Consensus       437 M~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  437 MKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             HHHHhhCCcccCCCHHHHH
Confidence            9999999999999998665

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.4e-42  Score=326.93  Aligned_cols=279  Identities=23%  Similarity=0.368  Sum_probs=200.8

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ...|++.+.||+|+||.||+|++..+++.||+|+....     ....|..++.++     .|+|++++++++......++
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~l  134 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNV-----NHPSVIRMKDTLVSGAITCM  134 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhC-----CCCCCcChhheEEeCCeeEE
Confidence            34689999999999999999999999999999986532     234588888887     78999999999999999999


Q ss_pred             EEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          122 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      |+|++.++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||++                       
T Consensus       135 v~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill-----------------------  190 (357)
T PHA03209        135 VLPHYSSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI-----------------------  190 (357)
T ss_pred             EEEccCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE-----------------------
Confidence            99999889999887643 368999999999999999999999999999999999999                       


Q ss_pred             cccCCCCCCeEEeecCcccccCCC--CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCC-CCCCch----
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL-FQTHEN----  274 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~p-f~~~~~----  274 (379)
                          +....++|+|||.+......  .....||..|+|||++.+..++.++|||||||++|+|+++..| |.....    
T Consensus       191 ----~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~  266 (357)
T PHA03209        191 ----NDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEE  266 (357)
T ss_pred             ----CCCCCEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHH
Confidence                45566788888877643222  2335689999999999988899999999999999999985444 443211    


Q ss_pred             -----HHHHHHHHHHcCCCChhHHHh-hhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          275 -----LEHLAMMERVLGPLPQHMLKR-VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       275 -----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                           ......+....+..|...... .......+....               .....+.... ........+.++.+|
T Consensus       267 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~-~~~~~~~~~~~~~~l  330 (357)
T PHA03209        267 YVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYA---------------SLERQPYTRY-PCFQRVNLPIDGEFL  330 (357)
T ss_pred             HHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhc---------------ccCCCccccc-HHHhccCCCchHHHH
Confidence                 111112222223222211100 000000000000               0000000000 000011345678899


Q ss_pred             HhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          349 LQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      |.+||+.||.+||||.|+|+||||++
T Consensus       331 i~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        331 VHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             HHHHHcCCcccCcCHHHHhcCchhcc
Confidence            99999999999999999999999985

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=1.3e-41  Score=309.72  Aligned_cols=253  Identities=23%  Similarity=0.392  Sum_probs=199.2

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee------
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY------  115 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~------  115 (379)
                      .-.|++.+.||+|+||.||+|.++.+++.||+|++.........+..|+..+..+    .+|+|++++.+.+..      
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~----~~h~~i~~~~~~~~~~~~~~~   80 (272)
T cd06637           5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKY----SHHRNIATYYGAFIKKNPPGM   80 (272)
T ss_pred             hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHh----cCCCCeeeEeeEEeecCCCCC
Confidence            3468889999999999999999999999999999976555556677788887776    257899999998864      


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      ....|++|||+ +++|.+++.......+++..+..++.|++.||+|||+.+++|+|++|+||+++               
T Consensus        81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~---------------  145 (272)
T cd06637          81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---------------  145 (272)
T ss_pred             CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEEC---------------
Confidence            34689999999 88999999875545689999999999999999999999999999999999994               


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhh-----CCCCCCccchHhHHHHHHHHHhCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~~l~~g~  266 (379)
                                  .+..++|+|||.+.....   ......|+..|+|||++.     +..++.++|+|||||++|+|++|.
T Consensus       146 ------------~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~  213 (272)
T cd06637         146 ------------ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA  213 (272)
T ss_pred             ------------CCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCC
Confidence                        445677777777654322   123356888999999986     335788999999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||...........+...  .                    ....                         .....+.++.
T Consensus       214 ~p~~~~~~~~~~~~~~~~--~--------------------~~~~-------------------------~~~~~~~~~~  246 (272)
T cd06637         214 PPLCDMHPMRALFLIPRN--P--------------------APRL-------------------------KSKKWSKKFQ  246 (272)
T ss_pred             CCccccCHHHHHHHHhcC--C--------------------CCCC-------------------------CCCCcCHHHH
Confidence            999654332221111100  0                    0000                         0113456899


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      +|+.+||..||.+|||+.|++.||||
T Consensus       247 ~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         247 SFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            99999999999999999999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=1e-44  Score=313.64  Aligned_cols=258  Identities=24%  Similarity=0.386  Sum_probs=213.5

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      ...+..-|.|+++||+|+||.||+|.++++|+.+|||.+.- +..-+++.+|+.++++.     ..+.+|++++.+-...
T Consensus        28 ~K~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV-~sDLQEIIKEISIMQQC-----~S~yVVKYYGSYFK~s  101 (502)
T KOG0574|consen   28 NKPPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV-DTDLQEIIKEISIMQQC-----KSKYVVKYYGSYFKHS  101 (502)
T ss_pred             cCChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc-cchHHHHHHHHHHHHHc-----CCchhhhhhhhhccCC
Confidence            34567789999999999999999999999999999999973 45567888999999997     7799999999999889


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      .+|+||||| .|++.+++.... +++++.++..++..-++||+|||...=+|||||..|||++                 
T Consensus       102 DLWIVMEYCGAGSiSDI~R~R~-K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN-----------------  163 (502)
T KOG0574|consen  102 DLWIVMEYCGAGSISDIMRARR-KPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN-----------------  163 (502)
T ss_pred             ceEeehhhcCCCcHHHHHHHhc-CCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEc-----------------
Confidence            999999999 799999998765 5799999999999999999999999999999999999995                 


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                .++..||+|||.|......   .++..||+.|+|||++....|..++||||||++..||+.|++||..-.
T Consensus       164 ----------T~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIH  233 (502)
T KOG0574|consen  164 ----------TDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIH  233 (502)
T ss_pred             ----------ccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccc
Confidence                      4555666666666543322   356789999999999999999999999999999999999999996543


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      +.-..   .-..-.+|+.+.                                           -++.++.++.|||++||
T Consensus       234 PMRAI---FMIPT~PPPTF~-------------------------------------------KPE~WS~~F~DFi~~CL  267 (502)
T KOG0574|consen  234 PMRAI---FMIPTKPPPTFK-------------------------------------------KPEEWSSEFNDFIRSCL  267 (502)
T ss_pred             cccee---EeccCCCCCCCC-------------------------------------------ChHhhhhHHHHHHHHHh
Confidence            32111   111111111110                                           01347889999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      .++|++|.||-++++|||++..
T Consensus       268 iK~PE~R~TA~~L~~H~FiknA  289 (502)
T KOG0574|consen  268 IKKPEERKTALRLCEHTFIKNA  289 (502)
T ss_pred             cCCHHHHHHHHHHhhhhhhcCC
Confidence            9999999999999999999864

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.3e-42  Score=320.89  Aligned_cols=255  Identities=26%  Similarity=0.394  Sum_probs=199.4

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|+||.||+++++.+++.||+|++....    .....+..|..++..+     +|++++.+++.+.+++++
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~   76 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG-----DRRWITNLHYAFQDENNL   76 (331)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-----CCCCCCceEEEEecCCeE
Confidence            5788999999999999999999999999999997422    1223355677766665     778999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++.+.. ..+++..+..++.||+.||+|||+.|++||||||+||++                    
T Consensus        77 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill--------------------  135 (331)
T cd05597          77 YLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL--------------------  135 (331)
T ss_pred             EEEEecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEE--------------------
Confidence            9999999 999999997643 358999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhC-----CCCCCccchHhHHHHHHHHHhCCCCC
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                             ..++.++|+|||.+.......    ....||+.|+|||++..     ..++.++|||||||++|+|++|+.||
T Consensus       136 -------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf  208 (331)
T cd05597         136 -------DKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPF  208 (331)
T ss_pred             -------CCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCC
Confidence                   455678888888875433222    22468999999999863     34788999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      ...+..+....+......                     ...+.                       .....+..++++|
T Consensus       209 ~~~~~~~~~~~i~~~~~~---------------------~~~~~-----------------------~~~~~~~~~~~li  244 (331)
T cd05597         209 YAESLVETYGKIMNHKEH---------------------FQFPP-----------------------DVTDVSEEAKDLI  244 (331)
T ss_pred             CCCCHHHHHHHHHcCCCc---------------------ccCCC-----------------------ccCCCCHHHHHHH
Confidence            876554443332211100                     00000                       0112567899999


Q ss_pred             hhccccCCCC--CcCHHHHhcCCCCCCC
Q 017021          350 QGLLRYDPTD--RLTAREALRHPFFTRD  375 (379)
Q Consensus       350 ~~~L~~dP~~--Rpta~e~l~hp~f~~~  375 (379)
                      ++||..++.+  |+++.++++||||.+.
T Consensus       245 ~~ll~~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         245 RRLICSPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             HHHccCcccccCCCCHHHHhcCCCCCCC
Confidence            9988664444  8899999999999764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-43  Score=320.72  Aligned_cols=264  Identities=25%  Similarity=0.393  Sum_probs=221.9

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeec----cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      +...-.|+..++||+||||.||-+.-+.||+.+|.|.+.+    ......-++.|.+++..+     +.+.||.+-..|+
T Consensus       181 pvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-----~s~FiVslaYAfe  255 (591)
T KOG0986|consen  181 PVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKV-----SSPFIVSLAYAFE  255 (591)
T ss_pred             hccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-----ccCcEEEEeeeec
Confidence            3344455666999999999999999999999999999853    234556677899999998     6678999999999


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      +.+.+|+|+..| ||+|.-.+.+.++..+++..++.++.+|+.||++||..+|+.||+||+|||+               
T Consensus       256 Tkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL---------------  320 (591)
T KOG0986|consen  256 TKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL---------------  320 (591)
T ss_pred             CCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee---------------
Confidence            999999999999 9999999998887789999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                  +..+.++|.|+|+|.......  ...+||.+|||||++.+..|+...|.|||||+||+|+.|+.||..
T Consensus       321 ------------Dd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~  388 (591)
T KOG0986|consen  321 ------------DDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ  388 (591)
T ss_pred             ------------ccCCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence                        666778888888886443333  345899999999999999999999999999999999999999976


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .......+.+.+-..                                             +...++.+..|++++++++.
T Consensus       389 ~KeKvk~eEvdrr~~---------------------------------------------~~~~ey~~kFS~eakslc~~  423 (591)
T KOG0986|consen  389 RKEKVKREEVDRRTL---------------------------------------------EDPEEYSDKFSEEAKSLCEG  423 (591)
T ss_pred             hhhhhhHHHHHHHHh---------------------------------------------cchhhcccccCHHHHHHHHH
Confidence            544333323322211                                             22234456789999999999


Q ss_pred             ccccCCCCCc-----CHHHHhcCCCCCCCCcCC
Q 017021          352 LLRYDPTDRL-----TAREALRHPFFTRDHLRR  379 (379)
Q Consensus       352 ~L~~dP~~Rp-----ta~e~l~hp~f~~~~~~~  379 (379)
                      +|++||.+|.     +++++-+||||+..+.||
T Consensus       424 LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~r  456 (591)
T KOG0986|consen  424 LLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRR  456 (591)
T ss_pred             HHccCHHHhccCCCcCcchhhhCcccccCCHhH
Confidence            9999999998     688999999999998876

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=1.1e-41  Score=322.08  Aligned_cols=289  Identities=26%  Similarity=0.432  Sum_probs=221.4

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec---
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---  116 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~---  116 (379)
                      ..|++.+.||+|+||.||+|.+..+++.||+|++...   ......+.+|+.++..+     .|+|++++++++...   
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   90 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLV-----NHKNIIGLLNVFTPQKSL   90 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhc-----CCCCCcceeeeeccCCCc
Confidence            4588889999999999999999999999999998632   22334556788888887     779999999887543   


Q ss_pred             ---ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          117 ---NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       117 ---~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                         ...|+||||+.++|.+.+..    .++...+..++.|++.||+|||+.|++||||||+||++               
T Consensus        91 ~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~---------------  151 (353)
T cd07850          91 EEFQDVYLVMELMDANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---------------  151 (353)
T ss_pred             cccCcEEEEEeccCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---------------
Confidence               35799999998899988865    28889999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                  +.++.++|+|||.+.......  ....++..|+|||.+.+..++.++|||||||++|+|++|+.||..
T Consensus       152 ------------~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~  219 (353)
T cd07850         152 ------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPG  219 (353)
T ss_pred             ------------CCCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCC
Confidence                        455567777887776543322  234578899999999998999999999999999999999999998


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .+.......+....+.++.++...+......+....... ... ...+.........    .........+..+.++|.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~  293 (353)
T cd07850         220 TDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKY-AGY-SFEELFPDVLFPP----DSESHNKLKASQARDLLSK  293 (353)
T ss_pred             CCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCC-CCc-chhhhCcccccCc----ccccccccchhHHHHHHHH
Confidence            887777778888888888888777666555554332110 000 0000000000000    0000022356778999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFT  373 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~  373 (379)
                      ||+.||++|||+.|+|.||||+
T Consensus       294 ~L~~dP~~R~t~~eiL~~~~~~  315 (353)
T cd07850         294 MLVIDPEKRISVDDALQHPYIN  315 (353)
T ss_pred             HcCCChhhCcCHHHHhcChhHh
Confidence            9999999999999999999875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=1.2e-41  Score=312.10  Aligned_cols=278  Identities=35%  Similarity=0.578  Sum_probs=217.4

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.+.||+|++|.||+|.+..+|+.||+|++....   .....+..|+.+++++     .|++++++++++..+...+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~   75 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC-----QHPYVVKLLDVFPHGSGFV   75 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhC-----CCCCCcceeeEEecCCeeE
Confidence            4788999999999999999999999999999987432   2345667788888877     5799999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +|+||++++|.+++.... ..+++..+..++.||+.||.|||+.|++|+||+|+||+++                     
T Consensus        76 ~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~---------------------  133 (286)
T cd07832          76 LVMEYMPSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS---------------------  133 (286)
T ss_pred             EEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEc---------------------
Confidence            999999999999987654 4689999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                            .++.++|+|||.+.......    ....|+..|+|||.+.+. .++.++|||||||++|+|++|.+||.+....
T Consensus       134 ------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~  207 (286)
T cd07832         134 ------ADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI  207 (286)
T ss_pred             ------CCCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH
Confidence                  45567778887766443322    234678899999988654 4689999999999999999999999887777


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+....+.+....|+...+..+.    +...++...            +   ..........+.++.++|++||+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------------~---~~~~~~~~~~~~~~~~li~~~l~~  268 (286)
T cd07832         208 EQLAIVFRTLGTPNEETWPGLTSLPDY----NKITFPESK------------P---IPLEEIFPDASPEALDLLKGLLVY  268 (286)
T ss_pred             HHHHHHHHHcCCCChHHHhhccCcchh----hcccCCCCC------------c---chHHHhCCCccHHHHHHHHHHhcc
Confidence            777777776666665555443221111    001111000            0   001122234568899999999999


Q ss_pred             CCCCCcCHHHHhcCCCCC
Q 017021          356 DPTDRLTAREALRHPFFT  373 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~  373 (379)
                      ||.+|||++++++||||.
T Consensus       269 ~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         269 DPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             ChhhCCCHHHHhhCcCcC
Confidence            999999999999999995

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-43  Score=348.27  Aligned_cols=258  Identities=26%  Similarity=0.408  Sum_probs=220.5

Q ss_pred             eeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeec----cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           37 YIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        37 ~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      -.-.....|.|++.||+|+||.|.+++.+.|++.||+|++++    .......+..|..++..-     +...|+.++..
T Consensus        69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-----ns~Wiv~LhyA  143 (1317)
T KOG0612|consen   69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG-----NSEWIVQLHYA  143 (1317)
T ss_pred             HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-----CcHHHHHHHHH
Confidence            344567789999999999999999999999999999999975    233456777888887765     67889999999


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                      |.+++++|+||||+ ||+|..++.+..  .+++..++.|+.+|+.||.-||+.|+|||||||+|||+             
T Consensus       144 FQD~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl-------------  208 (1317)
T KOG0612|consen  144 FQDERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL-------------  208 (1317)
T ss_pred             hcCccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe-------------
Confidence            99999999999999 999999999876  79999999999999999999999999999999999999             


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhC-----CCCCCccchHhHHHHHHHH
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVEL  262 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlG~il~~l  262 (379)
                                    +..++++|+|||.+...+.++    ...+|||.|++||++..     ..|+..+|+||+||++|||
T Consensus       209 --------------d~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEM  274 (1317)
T KOG0612|consen  209 --------------DKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEM  274 (1317)
T ss_pred             --------------cccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHH
Confidence                          778888999999887766554    45689999999999963     3589999999999999999


Q ss_pred             HhCCCCCCCCchHHHHHHHHHH--cCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc
Q 017021          263 CTGEALFQTHENLEHLAMMERV--LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  340 (379)
Q Consensus       263 ~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (379)
                      +.|..||+..+-.++...|...  .-.+|++                                               ..
T Consensus       275 lyG~TPFYadslveTY~KIm~hk~~l~FP~~-----------------------------------------------~~  307 (1317)
T KOG0612|consen  275 LYGETPFYADSLVETYGKIMNHKESLSFPDE-----------------------------------------------TD  307 (1317)
T ss_pred             HcCCCcchHHHHHHHHHHHhchhhhcCCCcc-----------------------------------------------cc
Confidence            9999999988887777766654  2222211                                               23


Q ss_pred             chhHHHHHHhhccccCCCCCcC---HHHHhcCCCCCCCC
Q 017021          341 SAGDLTHLLQGLLRYDPTDRLT---AREALRHPFFTRDH  376 (379)
Q Consensus       341 ~~~~~~~li~~~L~~dP~~Rpt---a~e~l~hp~f~~~~  376 (379)
                      +|.++++||++.+ -+|+.|..   ++++-.||||.+.+
T Consensus       308 VSeeakdLI~~ll-~~~e~RLgrngiedik~HpFF~g~~  345 (1317)
T KOG0612|consen  308 VSEEAKDLIEALL-CDREVRLGRNGIEDIKNHPFFEGID  345 (1317)
T ss_pred             cCHHHHHHHHHHh-cChhhhcccccHHHHHhCccccCCC
Confidence            7889999999855 57888887   99999999999865

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=9.7e-42  Score=319.16  Aligned_cols=303  Identities=18%  Similarity=0.250  Sum_probs=201.9

Q ss_pred             hhhhccccc--cceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           46 KIHSKMGEG--TFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        46 ~i~~~Lg~G--~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      +++++||+|  +|++||++.++.+|+.||+|+++..   .........|+.+++.+     +|+||+++++++..++..+
T Consensus         1 ~~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-----~hpniv~~~~~~~~~~~~~   75 (327)
T cd08227           1 ELLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLF-----NHPNIVPYRATFIADNELW   75 (327)
T ss_pred             ChhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhc-----CCCCeeeEEEEEEECCEEE
Confidence            367899999  7899999999999999999999743   22334555688877777     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|.+++.......+++..+..++.|++.||+|||+.|++||||||+||+++.++.+++.||+.....    
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~----  151 (327)
T cd08227          76 VVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSM----  151 (327)
T ss_pred             EEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcc----
Confidence            999999 899999997654446899999999999999999999999999999999999977766666666533211    


Q ss_pred             cccccCCCCCCeEEeecCcccc-cCCCCCcccccCCccchhhhhC--CCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTY-ERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~-~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                                    +++|.... .........++..|+|||++.+  ..++.++|||||||++|+|++|+.||.......
T Consensus       152 --------------~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  217 (327)
T cd08227         152 --------------INHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ  217 (327)
T ss_pred             --------------ccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH
Confidence                          11111110 0001122346778999999876  458899999999999999999999997654433


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccC-CCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      ....  ...+..+... .......+...... ............... ..................++.+.+||++||+.
T Consensus       218 ~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  293 (327)
T cd08227         218 MLLE--KLNGTVPCLL-DTTTIPAEELTMKPSRSGANSGLGESTTVS-TPRPSNGESSSHPYNRTFSPHFHHFVEQCLQR  293 (327)
T ss_pred             HHHH--HhcCCccccc-cccchhhhhcccCCcccCCcCCCCcccccC-CcCccccCCcccccccccCHHHHHHHHHHHhh
Confidence            2211  1112221110 00000000000000 000000000000000 00000000111112334577899999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||++|||++|+++||||++.
T Consensus       294 dP~~Rpt~~ell~~p~f~~~  313 (327)
T cd08227         294 NPDARPSASTLLNHSFFKQI  313 (327)
T ss_pred             CchhcCCHHHHhcChhhhhc
Confidence            99999999999999999763

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=3.3e-41  Score=310.20  Aligned_cols=277  Identities=27%  Similarity=0.461  Sum_probs=210.3

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .|++.+.||+|++|.||+|.++.+++.||+|.+.....  ......+|+.++..+     .|++++++++++.+.+..++
T Consensus         6 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   80 (291)
T cd07844           6 TYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDL-----KHANIVTLHDIIHTKKTLTL   80 (291)
T ss_pred             ceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhC-----CCcceeeEEEEEecCCeEEE
Confidence            57788999999999999999999999999999864321  223456789999888     67999999999999999999


Q ss_pred             EEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          122 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      ||||++++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++                      
T Consensus        81 v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~----------------------  137 (291)
T cd07844          81 VFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLIS----------------------  137 (291)
T ss_pred             EEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEc----------------------
Confidence            99999779999887654 2588999999999999999999999999999999999994                      


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCc-hHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE-NLE  276 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~-~~~  276 (379)
                           .++.++|+|||.+.......   ....++..|+|||.+.+ ..++.++||||+||++|+|++|..||.... ..+
T Consensus       138 -----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~  212 (291)
T cd07844         138 -----ERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVED  212 (291)
T ss_pred             -----CCCCEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH
Confidence                 44556777777664332211   12246788999999865 457899999999999999999999997655 455


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccch--hHHHHHHhhccc
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA--GDLTHLLQGLLR  354 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~li~~~L~  354 (379)
                      ....+.+..+.+.+..+..+.............  .    ....             .........  ..+.+++.+||+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~-------------~~~~~~~~~~~~~~~~li~~~L~  273 (291)
T cd07844         213 QLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPF--Y----PPRP-------------LINHAPRLDRIPHGEELALKFLQ  273 (291)
T ss_pred             HHHHHHHhcCCCChhhhhhhhhccccccccccc--c----CChh-------------HHHhCcCCCCchhHHHHHHHHhc
Confidence            555566667766666655544322111111000  0    0000             011111223  678999999999


Q ss_pred             cCCCCCcCHHHHhcCCCC
Q 017021          355 YDPTDRLTAREALRHPFF  372 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f  372 (379)
                      .||++|||++++++||||
T Consensus       274 ~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         274 YEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             cCcccccCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=1.4e-41  Score=315.49  Aligned_cols=282  Identities=29%  Similarity=0.437  Sum_probs=216.6

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch---hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec--c
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--N  117 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~--~  117 (379)
                      ..|++.+.||.|+||.||+|.++.+|+.||+|++.....   ......+|+.++.++     .|++++++++++...  +
T Consensus         7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~   81 (309)
T cd07845           7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNL-----RHPNIVELKEVVVGKHLD   81 (309)
T ss_pred             cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhC-----CCCCCcceEEEEecCCCC
Confidence            467888999999999999999999999999999874321   223445688888887     678999999988654  5


Q ss_pred             eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          118 HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       118 ~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      ..++||||++++|.+++.... ..+++..+..++.|++.||+|||+.|++||||||+||+++                  
T Consensus        82 ~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~------------------  142 (309)
T cd07845          82 SIFLVMEYCEQDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT------------------  142 (309)
T ss_pred             eEEEEEecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC------------------
Confidence            689999999889999987643 3689999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                               ..+.++|+|||.+.......   ....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||...+
T Consensus       143 ---------~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~  213 (309)
T cd07845         143 ---------DKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKS  213 (309)
T ss_pred             ---------CCCCEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                     44556777777665433221   22245778999999865 457899999999999999999999999888


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+....+..+..+|+.+......    +....+....               +.........+.++.++|.+||
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---------------~~~~~~~~~~~~~~~~li~~ml  274 (309)
T cd07845         214 EIEQLDLIIQLLGTPNESIWPGFSDLPLV----GKFTLPKQPY---------------NNLKHKFPWLSEAGLRLLNFLL  274 (309)
T ss_pred             HHHHHHHHHHhcCCCChhhchhhhccccc----ccccccCCCC---------------CchHHhccccCHHHHHHHHHHh
Confidence            88888888888777776666554332110    0011100000               0001111234678899999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +.||++|||+.|+++||||.+..
T Consensus       275 ~~dp~~R~t~~~il~h~~f~~~~  297 (309)
T cd07845         275 MYDPKKRATAEEALESSYFKEKP  297 (309)
T ss_pred             cCChhhCcCHHHHhcChhhccCC
Confidence            99999999999999999998654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=2.1e-41  Score=312.62  Aligned_cols=279  Identities=28%  Similarity=0.449  Sum_probs=213.7

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccch------hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~------~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      .|++.+.||+|++|.||+|.+..+++.||+|++.....      ....+..|+.++..+     .|++++++++++.+++
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~   75 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-----KHPNIIGLLDVFGHKS   75 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc-----CCCCChhhhheeecCC
Confidence            36778999999999999999999999999999974322      234455688888777     6799999999999999


Q ss_pred             eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          118 HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       118 ~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      ..++||||++++|.+++.... ..+++..+..++.||+.||.|||+.|++||||+|+||+++                  
T Consensus        76 ~~~lv~e~~~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~------------------  136 (298)
T cd07841          76 NINLVFEFMETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA------------------  136 (298)
T ss_pred             EEEEEEcccCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEc------------------
Confidence            999999999889999997654 3689999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                               .++.++|+|||.+.......   ....++..|+|||.+.+ ..++.++|+|||||++|+|++|.+||...+
T Consensus       137 ---------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~  207 (298)
T cd07841         137 ---------SDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS  207 (298)
T ss_pred             ---------CCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc
Confidence                     44556667777665433221   22346778999998865 457899999999999999999988888777


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.+..+.+....+.................                     ..........+..+.++|.+||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~li~~~l  266 (298)
T cd07841         208 DIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPP---------------------TPLKQIFPAASDDALDLLQRLL  266 (298)
T ss_pred             cHHHHHHHHHHcCCCchhhhhhcccccccccccccCC---------------------cchhhhcccccHHHHHHHHHHh
Confidence            7666666666666555554443222111110000000                     0011122345678999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +.||++|||++|++.||||++..
T Consensus       267 ~~~P~~R~s~~e~l~~~~~~~~~  289 (298)
T cd07841         267 TLNPNKRITARQALEHPYFSNDP  289 (298)
T ss_pred             cCCcccCcCHHHHhhCccccCCC
Confidence            99999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=5.4e-42  Score=276.49  Aligned_cols=278  Identities=29%  Similarity=0.484  Sum_probs=228.8

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|.-.++||+|.||+||+|++++|++.||+|++..+   +.....+.+|+-++..+     .|.||+++++...+++.+-
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkel-----khknivrl~dvlhsdkklt   77 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-----KHKNIVRLHDVLHSDKKLT   77 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHh-----hhcceeehhhhhccCceeE
Confidence            456679999999999999999999999999999743   34567888999999998     6789999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +|+|||.-+|..++++..+ .+..+.++.++.|++.||.|+|++++.|||+||+|.++                      
T Consensus        78 lvfe~cdqdlkkyfdslng-~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli----------------------  134 (292)
T KOG0662|consen   78 LVFEFCDQDLKKYFDSLNG-DLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI----------------------  134 (292)
T ss_pred             EeHHHhhHHHHHHHHhcCC-cCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe----------------------
Confidence            9999999999999988653 58999999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCCC---cccccCCccchhhhhCCC-CCCccchHhHHHHHHHHHh-CCCCCCCCchH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQN---YIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCT-GEALFQTHENL  275 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~~---~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~  275 (379)
                           ..++.+|++|||+++-++-+-.   .-+.|..|.+|.++.+.+ |+...|+||.|||+.|+.. |.+.|.+.+..
T Consensus       135 -----n~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvd  209 (292)
T KOG0662|consen  135 -----NRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD  209 (292)
T ss_pred             -----ccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHH
Confidence                 5666777888887775554432   235688899999998865 7788999999999999986 88889999999


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      ++..++.+.+|.+.++.|+.+....+.-.   ...+|...++.+.                 .+..+..-+|+++++|.-
T Consensus       210 dqlkrif~~lg~p~ed~wps~t~lpdyk~---yp~ypattswsqi-----------------vp~lns~grdllqkll~c  269 (292)
T KOG0662|consen  210 DQLKRIFRLLGTPTEDQWPSMTKLPDYKP---YPIYPATTSWSQI-----------------VPKLNSTGRDLLQKLLKC  269 (292)
T ss_pred             HHHHHHHHHhCCCccccCCccccCCCCcc---cCCccccchHHHH-----------------hhhhcchhHHHHHHHhcc
Confidence            99999999999999998886554332210   0111111111111                 123456678999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~  374 (379)
                      +|.+|++|+.+++||||.+
T Consensus       270 np~qrisaeaalqhpyf~d  288 (292)
T KOG0662|consen  270 NPAQRISAEAALQHPYFSD  288 (292)
T ss_pred             CcccccCHHHHhcCccccc
Confidence            9999999999999999986

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=3.9e-41  Score=308.03  Aligned_cols=275  Identities=32%  Similarity=0.533  Sum_probs=212.1

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec--ceEE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--NHIC  120 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~--~~~~  120 (379)
                      |++.++||+|+||.||+|.+..+++.||+|+++....  .......|+..+.++    .+|+|++++++++.++  +..+
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l----~~h~~i~~~~~~~~~~~~~~~~   76 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRL----SPHPNILRLIEVLFDRKTGRLA   76 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhc----CCCCCccceEEEEecCCCCcEE
Confidence            6788999999999999999999999999999874321  222334566666665    2478999999999887  8999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +||||+.++|.+.+.... ..+++..+..++.|++.||.|||+.|++||||+|+||++                      
T Consensus        77 lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l----------------------  133 (282)
T cd07831          77 LVFELMDMNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILI----------------------  133 (282)
T ss_pred             EEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE----------------------
Confidence            999999778888887643 368999999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                           +. +.++|+|||.+.......  ....++..|+|||.+.. ..++.++|+|||||++|+|++|..||.+.+..+.
T Consensus       134 -----~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~  207 (282)
T cd07831         134 -----KD-DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ  207 (282)
T ss_pred             -----cC-CCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH
Confidence                 34 668888888776443222  23457889999997654 4578999999999999999999999998888887


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+....+..++.+.........     ....++..               ............+.++.++|.+||+.||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---------------~~~~~~~~~~~~~~~~~~li~~~l~~~P  267 (282)
T cd07831         208 IAKIHDVLGTPDAEVLKKFRKSRH-----MNYNFPSK---------------KGTGLRKLLPNASAEGLDLLKKLLAYDP  267 (282)
T ss_pred             HHHHHHHcCCCCHHHHHhhccccc-----ccccCccc---------------ccccHHHHcccccHHHHHHHHHHhccCc
Confidence            777878788777765332211100     00111110               0011122223467899999999999999


Q ss_pred             CCCcCHHHHhcCCCC
Q 017021          358 TDRLTAREALRHPFF  372 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f  372 (379)
                      ++|||++++++||||
T Consensus       268 ~~R~~~~~~l~~~~~  282 (282)
T cd07831         268 DERITAKQALRHPYF  282 (282)
T ss_pred             ccccCHHHHhhCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=2.2e-41  Score=311.34  Aligned_cols=250  Identities=28%  Similarity=0.453  Sum_probs=208.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|++|.||++.+..+++.||+|++....    ........|++++.++     +|+|++++++.+..++..
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   76 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-----RHPFLVNLYGSFQDDSNL   76 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-----CCCCccceeeEEEcCCeE
Confidence            4788899999999999999999999999999987432    2345566788888887     689999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++....  .++...+..++.|++.||.|||+.|++||||+|+||++                    
T Consensus        77 ~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili--------------------  134 (290)
T cd05580          77 YLVMEYVPGGELFSHLRKSG--RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLL--------------------  134 (290)
T ss_pred             EEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE--------------------
Confidence            9999999 999999998764  68999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  278 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~  278 (379)
                             +.++.++|+|||.+...........|++.|+|||.+.+...+.++|+||||+++|+|++|..||...+..+..
T Consensus       135 -------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  207 (290)
T cd05580         135 -------DSDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIY  207 (290)
T ss_pred             -------CCCCCEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                   4556688888888776555444557889999999998888889999999999999999999999876543333


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCC
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  358 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  358 (379)
                      ..+.....+.|                                                 ...+..+.++|.+||+.||.
T Consensus       208 ~~~~~~~~~~~-------------------------------------------------~~~~~~l~~li~~~l~~~p~  238 (290)
T cd05580         208 EKILEGKVRFP-------------------------------------------------SFFSPDAKDLIRNLLQVDLT  238 (290)
T ss_pred             HHHhcCCccCC-------------------------------------------------ccCCHHHHHHHHHHccCCHH
Confidence            22221111111                                                 12457889999999999999


Q ss_pred             CCc-----CHHHHhcCCCCCCCC
Q 017021          359 DRL-----TAREALRHPFFTRDH  376 (379)
Q Consensus       359 ~Rp-----ta~e~l~hp~f~~~~  376 (379)
                      +|+     +++|+++||||....
T Consensus       239 ~R~~~~~~~~~~l~~~~~~~~~~  261 (290)
T cd05580         239 KRLGNLKNGVNDIKNHPWFAGID  261 (290)
T ss_pred             HccCcccCCHHHHHcCcccccCC
Confidence            999     999999999998653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=4.2e-41  Score=308.15  Aligned_cols=258  Identities=24%  Similarity=0.429  Sum_probs=203.9

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ...|++.+.||+|+||.||++.+..++..+|+|.+... ......+..|+.++..+     .|+|++.+++.+..++..+
T Consensus         4 ~~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~h~~ii~~~~~~~~~~~~~   78 (282)
T cd06643           4 EEFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASC-----DHPNIVKLLDAFYYENNLW   78 (282)
T ss_pred             HHHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHC-----CCCCeeeEEEEEeeCCEEE
Confidence            34589999999999999999999999999999998643 23345566788888877     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +|+||+ +++|..++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++                    
T Consensus        79 ~v~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~--------------------  137 (282)
T cd06643          79 ILIEFCAGGAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFT--------------------  137 (282)
T ss_pred             EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc--------------------
Confidence            999999 889988876533 3689999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhh-----CCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                             .++.++|+|||.+......   .....++..|+|||.+.     +..++.++|+|||||++|+|++|+.||..
T Consensus       138 -------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~  210 (282)
T cd06643         138 -------LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHE  210 (282)
T ss_pred             -------cCCCEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccc
Confidence                   4455666777666432211   12346888999999974     34577899999999999999999999987


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .+..+....+.....+..                                              .....++.++.++|.+
T Consensus       211 ~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~  244 (282)
T cd06643         211 LNPMRVLLKIAKSEPPTL----------------------------------------------AQPSRWSSEFKDFLKK  244 (282)
T ss_pred             cCHHHHHHHHhhcCCCCC----------------------------------------------CCccccCHHHHHHHHH
Confidence            665443333222111100                                              0012356789999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCCCcC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRDHLR  378 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~~~~  378 (379)
                      ||+.||.+|||++++++||||+....+
T Consensus       245 ~l~~~p~~Rp~~~~il~~~~~~~~~~~  271 (282)
T cd06643         245 CLEKNVDARWTTTQLLQHPFVTVNSNK  271 (282)
T ss_pred             HccCChhhCcCHHHHhcCCCEeccCCC
Confidence            999999999999999999999876543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=1.2e-41  Score=319.13  Aligned_cols=256  Identities=24%  Similarity=0.384  Sum_probs=199.6

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.++||+|+||.||+++++.+++.||+|++....    .....+..|..++..+     +|++++.+++.+.+.+..
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~   76 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-----DNQWITTLHYAFQDENNL   76 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-----CCCCEeeEEEEEecCCEE
Confidence            5788899999999999999999999999999986422    1122344566665554     778999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++.... ..+++..+..++.||+.||.|||+.|++||||||+||++                    
T Consensus        77 ~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili--------------------  135 (332)
T cd05623          77 YLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM--------------------  135 (332)
T ss_pred             EEEEeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE--------------------
Confidence            9999999 999999997643 258999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhh-----CCCCCCccchHhHHHHHHHHHhCCCCC
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                             +.++.++|+|||.+.......    ....||+.|+|||++.     ...++.++|||||||++|+|++|+.||
T Consensus       136 -------~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf  208 (332)
T cd05623         136 -------DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPF  208 (332)
T ss_pred             -------CCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCC
Confidence                   455667888888775432211    2346899999999986     345789999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      ...+..+....+......                     ..+|.                       .....+.++.+||
T Consensus       209 ~~~~~~~~~~~i~~~~~~---------------------~~~p~-----------------------~~~~~s~~~~~li  244 (332)
T cd05623         209 YAESLVETYGKIMNHKER---------------------FQFPA-----------------------QVTDVSEDAKDLI  244 (332)
T ss_pred             CCCCHHHHHHHHhCCCcc---------------------ccCCC-----------------------ccccCCHHHHHHH
Confidence            876655544333221100                     00110                       0123567899999


Q ss_pred             hhccccCCCC--CcCHHHHhcCCCCCCCC
Q 017021          350 QGLLRYDPTD--RLTAREALRHPFFTRDH  376 (379)
Q Consensus       350 ~~~L~~dP~~--Rpta~e~l~hp~f~~~~  376 (379)
                      ++||..+|.+  |++++|+++||||.+..
T Consensus       245 ~~ll~~~~~r~~r~~~~~~~~h~~f~~~~  273 (332)
T cd05623         245 RRLICSREHRLGQNGIEDFKQHPFFTGID  273 (332)
T ss_pred             HHHccChhhhcCCCCHHHHhCCCCcCCCC
Confidence            9999765555  78999999999998753

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=5.5e-41  Score=307.66  Aligned_cols=277  Identities=31%  Similarity=0.582  Sum_probs=208.3

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.+.||+|++|.||+|.++.+++.||+|++....   .....+..|+.++.++     .|+|++.+++.+......+
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~~   76 (286)
T cd07847           2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQL-----KHPNLVNLIEVFRRKRKLH   76 (286)
T ss_pred             ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhC-----CCCCEeeeeeEEeeCCEEE
Confidence            4788899999999999999999999999999986432   2234566788888887     6799999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|..++....  .+++..+..++.|++.||+|||+.|++||||||+||+++                    
T Consensus        77 ~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~--------------------  134 (286)
T cd07847          77 LVFEYCDHTVLNELEKNPR--GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT--------------------  134 (286)
T ss_pred             EEEeccCccHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEc--------------------
Confidence            999999 666666655433  589999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                             .++.++|+|||.+.......   ....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+....
T Consensus       135 -------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~  207 (286)
T cd07847         135 -------KQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV  207 (286)
T ss_pred             -------CCCcEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChH
Confidence                   44556777777665433322   22357788999999876 45789999999999999999999999987776


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.+..+.............  .+...  ...+.              +.............+..+.+||.+||+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~--------------~~~~~~~~~~~~~~~~~~~~li~~~l~~  269 (286)
T cd07847         208 DQLYLIRKTLGDLIPRHQQIFSTN--QFFKG--LSIPE--------------PETREPLESKFPNISSPALSFLKGCLQM  269 (286)
T ss_pred             HHHHHHHHHhCCCChHHhhhcccc--ccccc--ccCCC--------------cccccCHHHHhccCCHHHHHHHHHHhcC
Confidence            766666666655543322111000  00000  00000              0000011122334578899999999999


Q ss_pred             CCCCCcCHHHHhcCCCC
Q 017021          356 DPTDRLTAREALRHPFF  372 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f  372 (379)
                      ||++|||+.|++.||||
T Consensus       270 ~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         270 DPTERLSCEELLEHPYF  286 (286)
T ss_pred             CccccCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.8e-41  Score=328.38  Aligned_cols=278  Identities=27%  Similarity=0.361  Sum_probs=200.2

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ....|++.+.||+|+||.||+|.+..+++.||+|....     ....+|+.++.++     .|+||+++++++..++..+
T Consensus       167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L-----~HpnIv~l~~~~~~~~~~~  236 (461)
T PHA03211        167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRL-----SHPAVLALLDVRVVGGLTC  236 (461)
T ss_pred             ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHC-----CCCCCCcEEEEEEECCEEE
Confidence            45568899999999999999999999999999996432     2345799999988     7899999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +||+++.++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+|||++                     
T Consensus       237 lv~e~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~---------------------  294 (461)
T PHA03211        237 LVLPKYRSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN---------------------  294 (461)
T ss_pred             EEEEccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC---------------------
Confidence            999999889999887643 3689999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc--
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE--  273 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~--  273 (379)
                            .+..++|+|||++.......     ....||..|+|||++.+..++.++|||||||++|+|++|..|+....  
T Consensus       295 ------~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~  368 (461)
T PHA03211        295 ------GPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRG  368 (461)
T ss_pred             ------CCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcc
Confidence                  44556777777665332211     12468999999999999899999999999999999999876553321  


Q ss_pred             ------hHHHHHHHHHHcC---CCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          274 ------NLEHLAMMERVLG---PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       274 ------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                            .......+.+...   ..+......+................             ..+...     .....+.+
T Consensus       369 ~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------------~~~~~~-----~~~~~~~~  430 (461)
T PHA03211        369 DERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAY-------------TRPAWT-----RYYKLDLD  430 (461)
T ss_pred             cccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCcc-------------CCcchh-----hhccccch
Confidence                  1112222222111   11111000000000000000000000             000000     01134567


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      +.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       431 ~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        431 VEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             HHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence            999999999999999999999999999975

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.2e-41  Score=333.61  Aligned_cols=252  Identities=22%  Similarity=0.222  Sum_probs=204.2

Q ss_pred             hhhhhhhccccccceeEEEEEecCC-CceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~-~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ..|++.+.||+|++|.||+|.+..+ ++.||+|.+.... .....+..|+.++..+     +|+||+++++.+..+++.|
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l-----~Hpniv~~~~~~~~~~~~~  141 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAAC-----DHFGIVKHFDDFKSDDKLL  141 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhC-----CCCCEeEEEEEEEECCEEE
Confidence            3488999999999999999998877 7889999875432 2334556688888877     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      +||||+ +++|.+.+...  ....+++..+..++.||+.||.|||+.||+||||||+||++                   
T Consensus       142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll-------------------  202 (478)
T PTZ00267        142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFL-------------------  202 (478)
T ss_pred             EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEE-------------------
Confidence            999999 99999888642  22358899999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                              +..+.++|+|||++......     ....+||+.|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus       203 --------~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~  274 (478)
T PTZ00267        203 --------MPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP  274 (478)
T ss_pred             --------CCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence                    45566788888877654322     13346899999999999888999999999999999999999999876


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+....+......+                                                .....+.++.++|.+|
T Consensus       275 ~~~~~~~~~~~~~~~~------------------------------------------------~~~~~s~~~~~li~~~  306 (478)
T PTZ00267        275 SQREIMQQVLYGKYDP------------------------------------------------FPCPVSSGMKALLDPL  306 (478)
T ss_pred             CHHHHHHHHHhCCCCC------------------------------------------------CCccCCHHHHHHHHHH
Confidence            6544443322211000                                                0113567899999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      |+.||++|||+++++.|||++.
T Consensus       307 L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        307 LSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             hccChhhCcCHHHHHhCHHHHH
Confidence            9999999999999999999853

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=1.3e-41  Score=318.84  Aligned_cols=256  Identities=24%  Similarity=0.376  Sum_probs=200.4

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.++||+|+||.||+++++.+++.||+|++....    .....+..|..++..+     .|++++.+++.+..++..
T Consensus         2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~l~~~~~~~~~~   76 (331)
T cd05624           2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG-----DCQWITTLHYAFQDENYL   76 (331)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEcCCEE
Confidence            4788999999999999999999999999999987422    1223345566666555     779999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.||+||||||+||++                    
T Consensus        77 ~lv~Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill--------------------  135 (331)
T cd05624          77 YLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLL--------------------  135 (331)
T ss_pred             EEEEeCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEE--------------------
Confidence            9999999 999999997743 258999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhC-----CCCCCccchHhHHHHHHHHHhCCCCC
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                             +.++.++|+|||.+.......    ....||+.|+|||++.+     ..++.++|+|||||++|+|++|+.||
T Consensus       136 -------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf  208 (331)
T cd05624         136 -------DMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF  208 (331)
T ss_pred             -------cCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCc
Confidence                   455668888888776443322    22468999999999875     45788999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      ...+..+....+......                     .+++.                       .....+..++++|
T Consensus       209 ~~~~~~~~~~~i~~~~~~---------------------~~~p~-----------------------~~~~~~~~~~~li  244 (331)
T cd05624         209 YAESLVETYGKIMNHEER---------------------FQFPS-----------------------HITDVSEEAKDLI  244 (331)
T ss_pred             cCCCHHHHHHHHHcCCCc---------------------ccCCC-----------------------ccccCCHHHHHHH
Confidence            876654443332221100                     00110                       0123567899999


Q ss_pred             hhccccCCCC--CcCHHHHhcCCCCCCCC
Q 017021          350 QGLLRYDPTD--RLTAREALRHPFFTRDH  376 (379)
Q Consensus       350 ~~~L~~dP~~--Rpta~e~l~hp~f~~~~  376 (379)
                      .+||..++.+  |++++++++||||+..+
T Consensus       245 ~~ll~~~~~~~~~~~~~~~~~h~~f~~~~  273 (331)
T cd05624         245 QRLICSRERRLGQNGIEDFKKHAFFEGID  273 (331)
T ss_pred             HHHccCchhhcCCCCHHHHhcCCCcCCCC
Confidence            9999876655  56999999999998643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-41  Score=305.43  Aligned_cols=248  Identities=27%  Similarity=0.417  Sum_probs=199.9

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccch------hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~------~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      .|++.+.||+|++|.||.|.+..+++.||+|.+.....      ....+..|+.++.++     .|+++++++++++.+.
T Consensus         3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~   77 (263)
T cd06625           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-----QHERIVQYYGCLRDDE   77 (263)
T ss_pred             cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-----CCCCeeeeEEEEccCC
Confidence            57889999999999999999999999999999863221      223456677777777     7899999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..++++||+ +++|.+.+....  .++...+..++.|++.||.|||+.|++||||+|+||++                  
T Consensus        78 ~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv------------------  137 (263)
T cd06625          78 TLSIFMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILR------------------  137 (263)
T ss_pred             eEEEEEEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE------------------
Confidence            999999999 899999998754  58899999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                               +.++.++|+|||.+.......      ....|+..|+|||.+.+..++.++||||||+++|+|++|+.||.
T Consensus       138 ---------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~  208 (263)
T cd06625         138 ---------DSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWA  208 (263)
T ss_pred             ---------cCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCcc
Confidence                     445567777777765332211      22357788999999998889999999999999999999999997


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      ..+..+............                                               ......+..+.++|.
T Consensus       209 ~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~li~  241 (263)
T cd06625         209 EFEAMAAIFKIATQPTNP-----------------------------------------------QLPSHVSPDARNFLR  241 (263)
T ss_pred             ccchHHHHHHHhccCCCC-----------------------------------------------CCCccCCHHHHHHHH
Confidence            654433322211110000                                               011235678999999


Q ss_pred             hccccCCCCCcCHHHHhcCCCC
Q 017021          351 GLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      +||..||.+|||+.|+++||||
T Consensus       242 ~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         242 RTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHhhcCcccCCCHHHHhhCCCC
Confidence            9999999999999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=8.2e-41  Score=307.93  Aligned_cols=279  Identities=28%  Similarity=0.451  Sum_probs=216.3

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec--c
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--N  117 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~--~  117 (379)
                      ..|++.+.||+|+||.||+|.++.+++.+|+|.++...   .....+.+|+.++.++     .|+|++.+.+++...  +
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~ni~~~~~~~~~~~~~   79 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKL-----QHPNIVTVKEVVVGSNLD   79 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhc-----CCCCEEEEEEEEEecCCC
Confidence            36889999999999999999999999999999997432   2223456788888888     679999999998877  8


Q ss_pred             eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          118 HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       118 ~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      ..|+|+||++++|.+++.... ..+++..+..++.||+.||+|||+.|++||||+|+||++                   
T Consensus        80 ~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili-------------------  139 (293)
T cd07843          80 KIYMVMEYVEHDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL-------------------  139 (293)
T ss_pred             cEEEEehhcCcCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE-------------------
Confidence            999999999779999987754 258999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCC-CCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                              +.++.++|+|||.+.......   ....++..|+|||.+.+.. ++.++|+||||+++|+|++|..||....
T Consensus       140 --------~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~  211 (293)
T cd07843         140 --------NNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKS  211 (293)
T ss_pred             --------CCCCcEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                    445567778887766433321   2245788899999987644 6899999999999999999999999888


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc-chhHHHHHHhhc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH-SAGDLTHLLQGL  352 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~  352 (379)
                      ..+....+....+.++...|..+........  .......                .......+... .+..+.++|++|
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----------------~~~~~~~~~~~~~~~~~~~li~~~  273 (293)
T cd07843         212 EIDQLNKIFKLLGTPTEKIWPGFSELPGAKK--KTFTKYP----------------YNQLRKKFPALSLSDNGFDLLNRL  273 (293)
T ss_pred             hHHHHHHHHHHhCCCchHHHHHhhccchhcc--ccccccc----------------chhhhccccccCCChHHHHHHHHH
Confidence            7777777777777777766665432111100  0000000                00000011111 467899999999


Q ss_pred             cccCCCCCcCHHHHhcCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f  372 (379)
                      |+.||++|||++|++.||||
T Consensus       274 l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         274 LTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             hccCccccCCHHHHhcCCCC
Confidence            99999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=5e-41  Score=307.59  Aligned_cols=253  Identities=25%  Similarity=0.421  Sum_probs=199.0

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee------e
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD------Y  115 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~------~  115 (379)
                      .-.|++.+.||+|+||.||+|.+..+++.+|+|++............|+.++.++    .+|+|++++++++.      .
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~----~~h~~i~~~~~~~~~~~~~~~   90 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKY----SHHRNIATYYGAFIKKSPPGH   90 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHh----cCCCcEEEEeeehhcccccCC
Confidence            3468889999999999999999999999999999876544445566677777776    25789999998885      2


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      ....|++|||+ +++|.+++.......+++..+..++.||+.||+|||+.|++|+|++|+||++                
T Consensus        91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili----------------  154 (282)
T cd06636          91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL----------------  154 (282)
T ss_pred             CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----------------
Confidence            46899999999 7899999987554568899999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhh-----CCCCCCccchHhHHHHHHHHHhCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~~l~~g~  266 (379)
                                 +.++.++|+|||.+.....   ......|+..|+|||.+.     ...++.++|+|||||++|+|++|.
T Consensus       155 -----------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~  223 (282)
T cd06636         155 -----------TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGA  223 (282)
T ss_pred             -----------CCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCC
Confidence                       4455678888887754322   123356889999999875     345788999999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||......+....+.+.  ..+                    ..                         ....++..+.
T Consensus       224 ~p~~~~~~~~~~~~~~~~--~~~--------------------~~-------------------------~~~~~~~~~~  256 (282)
T cd06636         224 PPLCDMHPMRALFLIPRN--PPP--------------------KL-------------------------KSKKWSKKFI  256 (282)
T ss_pred             CCccccCHHhhhhhHhhC--CCC--------------------CC-------------------------cccccCHHHH
Confidence            999754432222111110  000                    00                         0013567899


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      ++|++||+.||.+|||+.|+++||||
T Consensus       257 ~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         257 DFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             HHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            99999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=1.6e-41  Score=333.35  Aligned_cols=256  Identities=22%  Similarity=0.236  Sum_probs=202.0

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      ......|++.+.||+|+||+||+|++..+++.||+|++....   .....+..|+..+..+     .|+++++++..+..
T Consensus        28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~-----~h~~iv~~~~~~~~  102 (496)
T PTZ00283         28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNC-----DFFSIVKCHEDFAK  102 (496)
T ss_pred             cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcC-----CCCcEEEeecceec
Confidence            344568999999999999999999999999999999986432   2234455666666655     77889988877653


Q ss_pred             cc--------eEEEEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccccc
Q 017021          116 RN--------HICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI  184 (379)
Q Consensus       116 ~~--------~~~lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~  184 (379)
                      ..        .+++||||+ +++|.+++...  ....+++..+..++.|++.||.|||+.||+||||||+||++      
T Consensus       103 ~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl------  176 (496)
T PTZ00283        103 KDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL------  176 (496)
T ss_pred             ccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE------
Confidence            22        478999999 89999998653  23468999999999999999999999999999999999999      


Q ss_pred             ccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhhCCCCCCccchHhHHHHH
Q 017021          185 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL  259 (379)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il  259 (379)
                                           +.++.++|+|||+++.....     .....||+.|+|||++.+..++.++|||||||++
T Consensus       177 ---------------------~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvil  235 (496)
T PTZ00283        177 ---------------------CSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLL  235 (496)
T ss_pred             ---------------------eCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHH
Confidence                                 45566888888877543221     2345789999999999998899999999999999


Q ss_pred             HHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhc
Q 017021          260 VELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD  339 (379)
Q Consensus       260 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (379)
                      |+|++|+.||...+..+....+......                                                ....
T Consensus       236 yeLltG~~Pf~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~  267 (496)
T PTZ00283        236 YELLTLKRPFDGENMEEVMHKTLAGRYD------------------------------------------------PLPP  267 (496)
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHhcCCCC------------------------------------------------CCCC
Confidence            9999999999876554433322111000                                                0112


Q ss_pred             cchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       340 ~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      ..++++.+++.+||+.||.+||++.++++|||++.
T Consensus       268 ~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        268 SISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             CCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence            35678999999999999999999999999999763

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=7.1e-41  Score=302.16  Aligned_cols=249  Identities=25%  Similarity=0.401  Sum_probs=198.8

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee-cceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-RNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~-~~~~  119 (379)
                      .|++.+.||+|++|.||++.++.+++.||+|.+....   .....+..|+.++.++     .|++++.+.+.+.. ...+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQL-----KHPNIVAYRESWEGEDGLL   75 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhC-----CCCCeeeeeeeecCCCCEE
Confidence            3788999999999999999999999999999986432   2234556677777776     67889999888764 4578


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |++|||+ +++|.+++.......+++.++..++.+++.||++||+.|++||||+|+||+++                   
T Consensus        76 ~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~-------------------  136 (257)
T cd08223          76 YIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT-------------------  136 (257)
T ss_pred             EEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe-------------------
Confidence            9999999 89999999775445689999999999999999999999999999999999994                   


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                              ....++|+|||.+......   .....+++.|+|||.+.+..++.++|+|||||++++|++|+.||...+..
T Consensus       137 --------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~  208 (257)
T cd08223         137 --------RTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN  208 (257)
T ss_pred             --------cCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH
Confidence                    4556777777766543221   12346788999999999888999999999999999999999999865543


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      .....+...  ..+.                                              .....+..+.+++.+||+.
T Consensus       209 ~~~~~~~~~--~~~~----------------------------------------------~~~~~~~~~~~li~~~l~~  240 (257)
T cd08223         209 SLVYRIIEG--KLPP----------------------------------------------MPKDYSPELGELIATMLSK  240 (257)
T ss_pred             HHHHHHHhc--CCCC----------------------------------------------CccccCHHHHHHHHHHhcc
Confidence            333222211  1100                                              0113567899999999999


Q ss_pred             CCCCCcCHHHHhcCCCC
Q 017021          356 DPTDRLTAREALRHPFF  372 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f  372 (379)
                      ||++|||+.++++||||
T Consensus       241 ~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         241 RPEKRPSVKSILRQPYI  257 (257)
T ss_pred             CcccCCCHHHHhcCCCC
Confidence            99999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=6.5e-41  Score=308.76  Aligned_cols=279  Identities=32%  Similarity=0.502  Sum_probs=210.0

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce--
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH--  118 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~--  118 (379)
                      .|++.+.||+|+||.||+|.+..+++.||+|++....   .....+.+|+.++..+.    +|++++++++.+.....  
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~----~~~~i~~~~~~~~~~~~~~   77 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLS----ESIYIVRLLDVEHVEEKNG   77 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHcc----CCCCccceeeeEeecCCCC
Confidence            4788899999999999999999999999999986432   12345667888888872    45789999988876655  


Q ss_pred             ---EEEEEeCCCCCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          119 ---ICIVFEKLGSSLYDFLRKNN---YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       119 ---~~lv~e~~~~sL~~~l~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                         .|++|||+.++|.+++....   ...+++..+..++.||+.||.|||+.|++||||+|+||+++.            
T Consensus        78 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~------------  145 (295)
T cd07837          78 KPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK------------  145 (295)
T ss_pred             CceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec------------
Confidence               89999999778999886542   235799999999999999999999999999999999999943            


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                                    .++.++|+|||.+.......   ....+++.|+|||.+.+ ..++.++|+||||+++|+|++|..|
T Consensus       146 --------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~  211 (295)
T cd07837         146 --------------QKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPL  211 (295)
T ss_pred             --------------CCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCC
Confidence                          15567888888776433221   22356788999998865 4578999999999999999999999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |.+.+..+....+.+..+.++...++.+.........      +.               ..........+..+.++.++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---------------~~~~~~~~~~~~~~~~~~~~  270 (295)
T cd07837         212 FPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEF------PQ---------------WKPQDLSRAVPDLSPEGLDL  270 (295)
T ss_pred             CCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhc------Cc---------------ccchhHHHhccccCHHHHHH
Confidence            9887776666666665555554443322221110000      00               00011112223467889999


Q ss_pred             HhhccccCCCCCcCHHHHhcCCCCC
Q 017021          349 LQGLLRYDPTDRLTAREALRHPFFT  373 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~hp~f~  373 (379)
                      |.+||+.||.+|||++|++.||||+
T Consensus       271 i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         271 LQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             HHHHccCChhhcCCHHHHhcCCCcC
Confidence            9999999999999999999999995

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=1e-40  Score=305.67  Aligned_cols=277  Identities=30%  Similarity=0.494  Sum_probs=215.3

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .|++.++||.|++|.||+|++..+|+.||+|+++...  .....+..|+.+++.+     .|+|++++++.+...+..++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   75 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKEL-----KHENIVRLHDVIHTENKLML   75 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhh-----cCCCEeeeeeeEeeCCcEEE
Confidence            4788899999999999999999999999999987432  2234566788888888     67999999999999999999


Q ss_pred             EEeCCCCCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKLGSSLYDFLRKNN-YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      ||||+.++|.+++.... ...+++..+..++.|++.||.|||+.|++||||+|+||+++                     
T Consensus        76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~---------------------  134 (284)
T cd07836          76 VFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN---------------------  134 (284)
T ss_pred             EEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---------------------
Confidence            99999779999887643 23589999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            .++.++|+|||.+.......   ....++..|++||.+.+. .++.++|+|||||++|+|++|+.||.+.+..+
T Consensus       135 ------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~  208 (284)
T cd07836         135 ------KRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED  208 (284)
T ss_pred             ------CCCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence                  44567777777665332221   223568889999988654 46899999999999999999999999887777


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.+....+.+..++.+.... .+.    ...+...               ........+..+..++++|.+||+.|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~---------------~~~~~~~~~~~~~~~~~~i~~~l~~~  268 (284)
T cd07836         209 QLLKIFRIMGTPTESTWPGISQLP-EYK----PTFPRYP---------------PQDLQQLFPHADPLGIDLLHRLLQLN  268 (284)
T ss_pred             HHHHHHHHhCCCChhhHHHHhcCc-hhc----ccccCCC---------------hHHHHHHhhhcCcHHHHHHHHHhcCC
Confidence            777777766666666555433111 110    0011000               01112223345788999999999999


Q ss_pred             CCCCcCHHHHhcCCCC
Q 017021          357 PTDRLTAREALRHPFF  372 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f  372 (379)
                      |++||+++|+++||||
T Consensus       269 p~~R~~~~~~l~~~~f  284 (284)
T cd07836         269 PELRISAHDALQHPWF  284 (284)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=8.1e-41  Score=301.47  Aligned_cols=248  Identities=26%  Similarity=0.380  Sum_probs=202.1

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      |.+.+.||+|++|.||+|.++.+++.||+|.+...   ......+..|+.++..+     .|++++++++.+...+..|+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   76 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKL-----DSSYIIRYYESFLDKGKLNI   76 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhc-----CCCCeehheeeeccCCEEEE
Confidence            66778999999999999999999999999998632   33455666788887777     78999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      ||||+ +++|.+++.......++...+..++.|++.||.|||+.|++|+||+|+||+++                     
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~---------------------  135 (256)
T cd08529          77 VMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD---------------------  135 (256)
T ss_pred             EEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe---------------------
Confidence            99999 89999999876445789999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                            .++.++|+|||.+.......   ....|++.|+|||+..+..++.++|+|||||++|+|++|+.||...+..+.
T Consensus       136 ------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  209 (256)
T cd08529         136 ------AYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGAL  209 (256)
T ss_pred             ------CCCCEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                  44567777777665433322   234578899999999988899999999999999999999999987664333


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.+...+.                                                .....+.++.++|++||+.||
T Consensus       210 ~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~i~~~l~~~p  241 (256)
T cd08529         210 ILKIIRGVFPP------------------------------------------------VSQMYSQQLAQLIDQCLTKDY  241 (256)
T ss_pred             HHHHHcCCCCC------------------------------------------------CccccCHHHHHHHHHHccCCc
Confidence            32221111000                                                001245689999999999999


Q ss_pred             CCCcCHHHHhcCCCC
Q 017021          358 TDRLTAREALRHPFF  372 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f  372 (379)
                      ++||++.++++|||+
T Consensus       242 ~~Rp~~~~ll~~~~~  256 (256)
T cd08529         242 RQRPDTFQLLRNPSL  256 (256)
T ss_pred             ccCcCHHHHhhCCCC
Confidence            999999999999995

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.4e-41  Score=306.56  Aligned_cols=256  Identities=29%  Similarity=0.464  Sum_probs=203.7

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .-.|+|.++||.|+||.||++.+..+++.+|+|.+.... .....+..|+.+++.+     .|++++++++.+..+...|
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   78 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSEC-----KHPNIVGLYEAYFYENKLW   78 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhC-----CCCceeEEEEEEecCCeEE
Confidence            456999999999999999999999899999999987432 2334566788888887     6899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++                    
T Consensus        79 lv~e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~--------------------  137 (280)
T cd06611          79 ILIEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT--------------------  137 (280)
T ss_pred             EEeeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEC--------------------
Confidence            999999 889999987643 3589999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhh-----CCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                             .++.++|+|||.+......   .....++..|+|||.+.     ...++.++|+|||||++|+|++|+.||..
T Consensus       138 -------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~  210 (280)
T cd06611         138 -------LDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHE  210 (280)
T ss_pred             -------CCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCccc
Confidence                   4556777777765432221   12346888999999975     34477899999999999999999999976


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .+.......+...  ..+.                  .                          .....++.++.++|.+
T Consensus       211 ~~~~~~~~~~~~~--~~~~------------------~--------------------------~~~~~~~~~~~~li~~  244 (280)
T cd06611         211 LNPMRVLLKILKS--EPPT------------------L--------------------------DQPSKWSSSFNDFLKS  244 (280)
T ss_pred             CCHHHHHHHHhcC--CCCC------------------c--------------------------CCcccCCHHHHHHHHH
Confidence            5543333222111  1000                  0                          0012356688999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ||+.||++||++.++++||||....
T Consensus       245 ~l~~~p~~Rps~~~il~~~~~~~~~  269 (280)
T cd06611         245 CLVKDPDDRPTAAELLKHPFVSDQS  269 (280)
T ss_pred             HhccChhhCcCHHHHhcChhhcccc
Confidence            9999999999999999999998754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.2e-43  Score=326.81  Aligned_cols=257  Identities=25%  Similarity=0.449  Sum_probs=212.7

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeec-cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG-IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      .+.-.+.|...||.|+||.||+|.+++++-..|.|++.. ....-..++-|++++...     .||+|+.+++.|-.++.
T Consensus        29 nP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~C-----dHP~ivkLl~ayy~enk  103 (1187)
T KOG0579|consen   29 NPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAEC-----DHPVIVKLLSAYYFENK  103 (1187)
T ss_pred             CHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcC-----CChHHHHHHHHHhccCc
Confidence            345568899999999999999999999999999999863 344456677799998886     78999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      +||+.||| ||-...++-..+ +.+++.++..+++|++.||.|||+++|||||||..|||+                   
T Consensus       104 LwiliEFC~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~-------------------  163 (1187)
T KOG0579|consen  104 LWILIEFCGGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILL-------------------  163 (1187)
T ss_pred             eEEEEeecCCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEE-------------------
Confidence            99999999 777766665544 579999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhh-----CCCCCCccchHhHHHHHHHHHhCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                              .-++.++|+|||.+.....   ...++.|||+|||||+..     ..+|+.++||||||+++.+|+.+.+|-
T Consensus       164 --------TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPH  235 (1187)
T KOG0579|consen  164 --------TLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPH  235 (1187)
T ss_pred             --------EecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCc
Confidence                    5566788888887754322   225678999999999874     468999999999999999999999998


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      ...+..-....+.+.   .|+.+                                           ..+.+++..+.||+
T Consensus       236 helnpMRVllKiaKS---ePPTL-------------------------------------------lqPS~Ws~~F~DfL  269 (1187)
T KOG0579|consen  236 HELNPMRVLLKIAKS---EPPTL-------------------------------------------LQPSHWSRSFSDFL  269 (1187)
T ss_pred             cccchHHHHHHHhhc---CCCcc-------------------------------------------cCcchhhhHHHHHH
Confidence            766665554444332   22211                                           01235788999999


Q ss_pred             hhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          350 QGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ..||..||..||+|+|+|+||||...
T Consensus       270 k~cL~Knp~~Rp~aaqll~Hpfv~~~  295 (1187)
T KOG0579|consen  270 KRCLVKNPRNRPPAAQLLKHPFVQNA  295 (1187)
T ss_pred             HHHHhcCCccCCCHHHHhhCcccccC
Confidence            99999999999999999999999854

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=7.7e-41  Score=310.49  Aligned_cols=287  Identities=25%  Similarity=0.374  Sum_probs=204.4

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .|++.+.||+|+||.||++.+..++..+|+|.+...  ......+..|++++.++     .|+|++++++.+..++.+++
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~l   76 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHEC-----NSPYIVGFYGAFYSDGEISI   76 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEeeCCEEEE
Confidence            478889999999999999999999999999998643  22334567788888887     77999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      ||||+ +++|.+++.+..  .+++..+..++.|++.||.|||+ .+++|+||||+||+++.                   
T Consensus        77 v~ey~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~-------------------  135 (308)
T cd06615          77 CMEHMDGGSLDQVLKKAG--RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNS-------------------  135 (308)
T ss_pred             EeeccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEec-------------------
Confidence            99999 899999998764  68999999999999999999997 69999999999999944                   


Q ss_pred             cccccCCCCCCeEEeecCcccccCCC-CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  278 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~  278 (379)
                              ++.++|+|||.+...... .....|+..|+|||.+.+..++.++|+|||||++|+|++|+.||...+.....
T Consensus       136 --------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~  207 (308)
T cd06615         136 --------RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELE  207 (308)
T ss_pred             --------CCcEEEccCCCcccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHH
Confidence                    445677777766432221 23346889999999998888999999999999999999999999765533222


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCC
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  358 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  358 (379)
                      ..+.......+...    ..   ........+.+......+...........    ......++.++.++|.+||..||+
T Consensus       208 ~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~P~  276 (308)
T cd06615         208 AMFGRPVSEGEAKE----SH---RPVSGHPPDSPRPMAIFELLDYIVNEPPP----KLPSGAFSDEFQDFVDKCLKKNPK  276 (308)
T ss_pred             HhhcCccccccccC----Cc---ccccCCCCCccchhhHHHHHHHHhcCCCc----cCcCcccCHHHHHHHHHHccCChh
Confidence            11111110000000    00   00000000000000000001110000000    000012567899999999999999


Q ss_pred             CCcCHHHHhcCCCCCCC
Q 017021          359 DRLTAREALRHPFFTRD  375 (379)
Q Consensus       359 ~Rpta~e~l~hp~f~~~  375 (379)
                      +|||+.|+++||||.+.
T Consensus       277 ~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         277 ERADLKELTKHPFIKRA  293 (308)
T ss_pred             hCcCHHHHhcChhhhhc
Confidence            99999999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.3e-41  Score=304.86  Aligned_cols=251  Identities=26%  Similarity=0.408  Sum_probs=204.7

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .|++.+.||.|++|.||+|.+..+++.||+|++....  .....+..|+.+++.+     .|+|++.+.+.+..+...|+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~~   76 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQC-----RSPYITKYYGSFLKGSKLWI   76 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHc-----CCCCeeeeeEEEEECCeEEE
Confidence            5788999999999999999999999999999987432  2234556788888877     67999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      |+||+ +++|.+++...   .+++..+..++.|++.||.|||+.+++||||+|+||++                      
T Consensus        77 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i----------------------  131 (274)
T cd06609          77 IMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL----------------------  131 (274)
T ss_pred             EEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE----------------------
Confidence            99999 88999998765   58999999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                           +.++.++|+|||.+......   .....++..|+|||.+.+..++.++|||||||++|+|++|..||...+....
T Consensus       132 -----~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~  206 (274)
T cd06609         132 -----SEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV  206 (274)
T ss_pred             -----CCCCCEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH
Confidence                 44556777777776543322   2334678899999999888899999999999999999999999976554333


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc-chhHHHHHHhhccccC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH-SAGDLTHLLQGLLRYD  356 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~d  356 (379)
                      ...+.....+..                                                ... ++..+.+++.+||..|
T Consensus       207 ~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~l~~~l~~~  238 (274)
T cd06609         207 LFLIPKNNPPSL------------------------------------------------EGNKFSKPFKDFVSLCLNKD  238 (274)
T ss_pred             HHHhhhcCCCCC------------------------------------------------cccccCHHHHHHHHHHhhCC
Confidence            322222111100                                                011 4567999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCCCc
Q 017021          357 PTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~~~  377 (379)
                      |++|||++++++||||++...
T Consensus       239 p~~Rpt~~~il~~~~~~~~~~  259 (274)
T cd06609         239 PKERPSAKELLKHKFIKKAKK  259 (274)
T ss_pred             hhhCcCHHHHhhChhhcCCCc
Confidence            999999999999999987643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=6e-41  Score=314.98  Aligned_cols=279  Identities=29%  Similarity=0.508  Sum_probs=210.2

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec----
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR----  116 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~----  116 (379)
                      ..|++.+.||+|+||.||+|.+..+|+.||+|+++..  .........|+.++..+     .|+|++++++++...    
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~   79 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRF-----KHENIIGILDIIRPPSFES   79 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhC-----CCCCcCchhheeecccccc
Confidence            4688999999999999999999999999999998632  23345566788888888     678999998876543    


Q ss_pred             -ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          117 -NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       117 -~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                       ...|+++||++++|.+.+...   .+++..+..++.|++.||+|||+.|++||||||+||+++.+              
T Consensus        80 ~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~--------------  142 (336)
T cd07849          80 FNDVYIVQELMETDLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTN--------------  142 (336)
T ss_pred             cceEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCC--------------
Confidence             468999999988998888654   48999999999999999999999999999999999999544              


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                                   +.++|+|||.+.......      ....||..|+|||.+.+ ..++.++|||||||++|+|++|+.|
T Consensus       143 -------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~  209 (336)
T cd07849         143 -------------CDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPL  209 (336)
T ss_pred             -------------CCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                         445556666554322111      12457889999998754 4688999999999999999999999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhh-hhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      |...+.......+....+.++.+.+....... ..+...  .....                 ...........+.++.+
T Consensus       210 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----------------~~~~~~~~~~~~~~~~~  270 (336)
T cd07849         210 FPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKS--LPFKP-----------------KVPWNKLFPNADPKALD  270 (336)
T ss_pred             CCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhh--cCcCC-----------------cccHHHHhcccCcHHHH
Confidence            98877777777777777766655544332211 111110  00000                 00000112235778999


Q ss_pred             HHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          348 LLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +|.+||+.||++|||+.|+++||||+.-
T Consensus       271 li~~~l~~dP~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         271 LLDKMLTFNPHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             HHHHHcCCChhhCcCHHHHhcCcccccc
Confidence            9999999999999999999999999753

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=1e-40  Score=307.04  Aligned_cols=280  Identities=26%  Similarity=0.399  Sum_probs=207.3

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ..|++.+.||+|+||.||+|.++.+++.||+|++....  .......+|+..+..+     .|+|++++++++..+...|
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~ni~~~~~~~~~~~~~~   79 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGL-----KHANIVLLHDIIHTKETLT   79 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhc-----CCCCEeEEEEEEecCCeEE
Confidence            35788899999999999999999999999999986432  2223556788888887     6789999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +|+||+++++.+.+.... ..+++..+..++.|++.||.|||+.|++|+||||+||+++                     
T Consensus        80 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~---------------------  137 (291)
T cd07870          80 FVFEYMHTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS---------------------  137 (291)
T ss_pred             EEEecccCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc---------------------
Confidence            999999888888776543 3578888999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCch-H
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN-L  275 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~-~  275 (379)
                            .++.++|+|||.+......   .....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||...+. .
T Consensus       138 ------~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~  211 (291)
T cd07870         138 ------YLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF  211 (291)
T ss_pred             ------CCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH
Confidence                  4456777777766532221   122356889999999865 3578899999999999999999999976543 3


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+....+.+++..+..+...............+.               ..... .. ....+..+.+++.+||+.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~-~~-~~~~~~~~~~ll~~~l~~  274 (291)
T cd07870         212 EQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQ---------------QLRVV-WK-RLSRPPKAEDLASQMLMM  274 (291)
T ss_pred             HHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCc---------------chhhh-cc-ccCCChHHHHHHHHHhCc
Confidence            44445555566665555444332111110000000000               00000 00 001356789999999999


Q ss_pred             CCCCCcCHHHHhcCCCC
Q 017021          356 DPTDRLTAREALRHPFF  372 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f  372 (379)
                      ||.+|||++|++.||||
T Consensus       275 dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         275 FPKDRISAQDALLHPYF  291 (291)
T ss_pred             CcccCcCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=7.8e-42  Score=296.86  Aligned_cols=294  Identities=28%  Similarity=0.485  Sum_probs=229.0

Q ss_pred             hhhhhhhccccccceeEEEEEecCCC----ceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERK----EMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~----~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      +.|++...||+|.||.||+|..+.++    ..+|||.++..   ......+.+|+..+..+     .|+|++.+...|-+
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl-----~h~nvi~Lv~Vfl~   98 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLREL-----KHPNVISLVKVFLS   98 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHh-----cCCcchhHHHHHhc
Confidence            46888999999999999999766553    37899999854   24457788899999998     78999999998876


Q ss_pred             -cceEEEEEeCCCCCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          116 -RNHICIVFEKLGSSLYDFLRKNN---YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       116 -~~~~~lv~e~~~~sL~~~l~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                       +..+++++||+..+|.+++.-+.   .+.++...+.+++.||+.|+.|||+.=|+||||||.|||+.-+|         
T Consensus        99 ~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdg---------  169 (438)
T KOG0666|consen   99 HDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDG---------  169 (438)
T ss_pred             cCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccC---------
Confidence             88999999999999999997432   24688999999999999999999999999999999999996544         


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHh
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~  264 (379)
                                    ...+.+||+|+|+++....+-      ...+.|.-|.|||.+.+. .|+.+.||||.|||+.||++
T Consensus       170 --------------perG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLt  235 (438)
T KOG0666|consen  170 --------------PERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLT  235 (438)
T ss_pred             --------------CccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHc
Confidence                          567899999999998665543      235678999999999875 58999999999999999999


Q ss_pred             CCCCCCCCc---------hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccch-hhHHHH
Q 017021          265 GEALFQTHE---------NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP-RLQNLI  334 (379)
Q Consensus       265 g~~pf~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  334 (379)
                      -++.|.+..         ..+...+|.+++|.+.+..|+.+....+....-            ..+....-++ .+-+..
T Consensus       236 l~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~l------------s~f~~~~~~n~sL~~~~  303 (438)
T KOG0666|consen  236 LEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLL------------SDFRRHYYDNVSLHKYY  303 (438)
T ss_pred             cCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHH------------HHhHHhhcCcchHHHHH
Confidence            999997632         245667888899999988887655433321110            1111000000 011111


Q ss_pred             HHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       335 ~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                       ..+..-++.+.+|+.+||++||-+|.||+|+++|+||.++.+
T Consensus       304 -~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~l  345 (438)
T KOG0666|consen  304 -HKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPL  345 (438)
T ss_pred             -HHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCC
Confidence             112334456999999999999999999999999999998864

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.1e-41  Score=312.73  Aligned_cols=280  Identities=24%  Similarity=0.360  Sum_probs=210.5

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccch----hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|++|.||+|.+..+++.||+|.+.....    ....+..|++.+..+     .|++++++++.+......
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~   76 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-----DHPFLPTLYASFQTETYL   76 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhC-----CCCCchhheeeeecCCEE
Confidence            47788999999999999999999999999999974322    334566788888777     679999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |++|||+ +++|.+++.......+++..+..++.|++.||+|||+.|++||||||+||+++.++.+++.|||++......
T Consensus        77 ~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~  156 (316)
T cd05574          77 CLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE  156 (316)
T ss_pred             EEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence            9999999 899999998765457899999999999999999999999999999999999988888888888876543222


Q ss_pred             CcccccCCCCCC-----eE-EeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          199 SSYFKRMPKSSA-----IK-VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       199 ~~~~~~~~~~~~-----~~-l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                      ............     .+ .... .............||..|+|||.+.+..++.++||||||+++|+|++|+.||.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~  235 (316)
T cd05574         157 PPPVSKALRKGSRRSSVNSIPSET-FSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS  235 (316)
T ss_pred             ccccccccccccccccccccchhh-hcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence            111000000000     00 0000 0000111123356899999999999888999999999999999999999999876


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+....+.......+                       .                        ....+..+.++|.+|
T Consensus       236 ~~~~~~~~~~~~~~~~~-----------------------~------------------------~~~~~~~~~~li~~~  268 (316)
T cd05574         236 NRDETFSNILKKEVTFP-----------------------G------------------------SPPVSSSARDLIRKL  268 (316)
T ss_pred             chHHHHHHHhcCCccCC-----------------------C------------------------ccccCHHHHHHHHHH
Confidence            65443332221110100                       0                        011467899999999


Q ss_pred             cccCCCCCcC----HHHHhcCCCCCCCC
Q 017021          353 LRYDPTDRLT----AREALRHPFFTRDH  376 (379)
Q Consensus       353 L~~dP~~Rpt----a~e~l~hp~f~~~~  376 (379)
                      |+.||++|||    ++|+++||||+...
T Consensus       269 l~~~p~~R~s~~~~~~~ll~~~~~~~~~  296 (316)
T cd05574         269 LVKDPSKRLGSKRGAAEIKQHPFFRGVN  296 (316)
T ss_pred             ccCCHhHCCCchhhHHHHHcCchhhcCC
Confidence            9999999999    99999999998753

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=1.3e-40  Score=306.74  Aligned_cols=281  Identities=30%  Similarity=0.471  Sum_probs=216.0

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.++||+|++|.||+|.++.+++.||+|++....   .....+..|+.++..+     .|++++++++++..+...|
T Consensus         3 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   77 (294)
T PLN00009          3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-----QHGNIVRLQDVVHSEKRLY   77 (294)
T ss_pred             ceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhc-----cCCCEeeEEEEEecCCeEE
Confidence            4788899999999999999999999999999986432   2234566788888887     6799999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +||||++++|.+.+.......+++..+..++.||+.||+|||+.|++|+||+|+||+++.                    
T Consensus        78 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~--------------------  137 (294)
T PLN00009         78 LVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR--------------------  137 (294)
T ss_pred             EEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC--------------------
Confidence            999999778988887655445688899999999999999999999999999999999952                    


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            .+..++|+|||.+.......   ....+++.|+|||.+.+. .++.++|||||||++|+|++|..||......+
T Consensus       138 ------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~  211 (294)
T PLN00009        138 ------RTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID  211 (294)
T ss_pred             ------CCCEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                  23457888888776433221   223568899999988664 57899999999999999999999998877666


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+....+.+....|.............  ..++                  ...........+..+.++|.+||+.|
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------------------~~~~~~~~~~~~~~~~~~i~~~l~~~  271 (294)
T PLN00009        212 ELFKIFRILGTPNEETWPGVTSLPDYKSAF--PKWP------------------PKDLATVVPTLEPAGVDLLSKMLRLD  271 (294)
T ss_pred             HHHHHHHHhCCCChhhccccccchhhhhhc--ccCC------------------CCCHHHhCcCCChHHHHHHHHHccCC
Confidence            666666666666655554322211110000  0000                  00111122346778999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~  375 (379)
                      |++||++.++++||||.+.
T Consensus       272 P~~Rps~~~~l~~~~~~~~  290 (294)
T PLN00009        272 PSKRITARAALEHEYFKDL  290 (294)
T ss_pred             hhhCcCHHHHhcCchHhHH
Confidence            9999999999999999864

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-40  Score=304.57  Aligned_cols=276  Identities=31%  Similarity=0.510  Sum_probs=214.1

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      |++.++||.|++|.||+|.++.+|..||+|++....   .....+..|+..+..+     .|++++++++++..++..|+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-----~~~~iv~~~~~~~~~~~~~i   75 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKEL-----NHPNIVRLLDVVHSENKLYL   75 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhc-----CCCCccCHhheeccCCeEEE
Confidence            678899999999999999999999999999987432   2234566788888888     68999999999999999999


Q ss_pred             EEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          122 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      +|||++++|.+++.......+++..+..++.|++.||+|||+.+++||||+|+||+++                      
T Consensus        76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~----------------------  133 (283)
T cd07835          76 VFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLID----------------------  133 (283)
T ss_pred             EEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc----------------------
Confidence            9999988999999776544689999999999999999999999999999999999994                      


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                           .++.++|+|||.+.......   ....++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...+....
T Consensus       134 -----~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~  208 (283)
T cd07835         134 -----REGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ  208 (283)
T ss_pred             -----CCCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                 45567777777765432221   223467889999987654 468999999999999999999999988777666


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.+..+.+.+..|..+....+-.....  .++                  ...........+..+.++|.+||+.||
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------------------~~~~~~~~~~~~~~~~~li~~~l~~~P  268 (283)
T cd07835         209 LFRIFRTLGTPDEDVWPGVTSLPDYKPTFP--KWA------------------RQDLSKVVPNLDEDGLDLLSKMLVYDP  268 (283)
T ss_pred             HHHHHHHhCCCChHHhhhhhhchhhhhhcc--ccc------------------ccchhhhcCCCCHHHHHHHHHHhcCCh
Confidence            666666666666655544322211110000  000                  000111233466789999999999999


Q ss_pred             CCCcCHHHHhcCCCC
Q 017021          358 TDRLTAREALRHPFF  372 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f  372 (379)
                      ++|||++|++.||||
T Consensus       269 ~~Rpt~~~il~~~~~  283 (283)
T cd07835         269 AKRISAKAALQHPYF  283 (283)
T ss_pred             hhCcCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=1.1e-40  Score=309.34  Aligned_cols=279  Identities=27%  Similarity=0.486  Sum_probs=208.9

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec----
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR----  116 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~----  116 (379)
                      .|++.++||+|+||.||+|.+..+++.||+|++....   ........|+.+++++     .|++++++++++...    
T Consensus        13 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~   87 (310)
T cd07865          13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLL-----KHENVVNLIEICRTKATPY   87 (310)
T ss_pred             heEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhC-----CCCCccceEEEEecccccc
Confidence            5788899999999999999999999999999986322   2233445688888888     678999999887654    


Q ss_pred             ----ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          117 ----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       117 ----~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                          ...++||||++++|.+.+.... ..+++..+..++.||+.||.|||+.|++|+||+|+||+++.+           
T Consensus        88 ~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~-----------  155 (310)
T cd07865          88 NRYKGSFYLVFEFCEHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKD-----------  155 (310)
T ss_pred             cCCCceEEEEEcCCCcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCC-----------
Confidence                3569999999889988887653 358999999999999999999999999999999999999544           


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC-------CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHh
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~  264 (379)
                                      +.++|+|||.+.......       ....++..|+|||.+.+. .++.++|+||||+++|+|++
T Consensus       156 ----------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t  219 (310)
T cd07865         156 ----------------GILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWT  219 (310)
T ss_pred             ----------------CcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHh
Confidence                            455666666554322111       123567889999988664 46889999999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |..||.+.+.......+.+..+..+..+++....... ...   ...+....  .....           .-.....+..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~--~~~~~-----------~l~~~~~~~~  282 (310)
T cd07865         220 RSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLEL-FKK---MELPQGQK--RKVKE-----------RLKPYVKDPH  282 (310)
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhh-hhh---ccCCCccc--hhhHH-----------hcccccCCHH
Confidence            9999998887777777888888887776654422111 000   11111000  00000           0001124567


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhcCCCC
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      +.++|.+||..||++|||++|+++||||
T Consensus       283 ~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         283 ALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             HHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            8999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=1.2e-40  Score=312.84  Aligned_cols=298  Identities=25%  Similarity=0.419  Sum_probs=216.3

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhh---------------HhHHHHHHHHHHHHhcCCCCCee
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR---------------EAAMIEIEVLQQLAKHDKGGNRC  106 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~---------------~~~~~e~~~l~~l~~~~~~~~~i  106 (379)
                      ...+.+.+.||+|+||.||+|.++.+++.||+|+++......               ..+.+|+.++..+     .|+++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i   82 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-----KHENI   82 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-----CCcce
Confidence            334456688999999999999999999999999986432211               1356788888887     67999


Q ss_pred             EEecceeeecceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccccccc
Q 017021          107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV  186 (379)
Q Consensus       107 ~~~~~~~~~~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~  186 (379)
                      +.+++++..++..+++|||+.++|.+++....  .+++..+..++.|++.||.|||+.|++||||+|+||+++.++.+++
T Consensus        83 v~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl  160 (335)
T PTZ00024         83 MGLVDVYVEGDFINLVMDIMASDLKKVVDRKI--RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKI  160 (335)
T ss_pred             eeeeEEEecCCcEEEEEeccccCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEE
Confidence            99999999999999999999889999997654  5899999999999999999999999999999999999977776666


Q ss_pred             CCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhC
Q 017021          187 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTG  265 (379)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g  265 (379)
                      .|||.+.....+.....  ...      +...  ..........++..|+|||.+.+. .++.++|+|||||++|+|++|
T Consensus       161 ~dfg~~~~~~~~~~~~~--~~~------~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg  230 (335)
T PTZ00024        161 ADFGLARRYGYPPYSDT--LSK------DETM--QRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTG  230 (335)
T ss_pred             CCccceeeccccccccc--ccc------cccc--cccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhC
Confidence            66665543321110000  000      0000  000111223467889999998764 468999999999999999999


Q ss_pred             CCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          266 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       266 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                      ..||.+.+..+....+....+.++...|+........ ..     +..  .         ..    ..........+..+
T Consensus       231 ~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~-----~~~--~---------~~----~~~~~~~~~~~~~~  289 (335)
T PTZ00024        231 KPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLY-TE-----FTP--R---------KP----KDLKTIFPNASDDA  289 (335)
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccc-cc-----cCc--C---------Cc----ccHHHhCcCCChHH
Confidence            9999988877777777777666655443321110000 00     000  0         00    00111123456789


Q ss_pred             HHHHhhccccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          346 THLLQGLLRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      .++|.+||+.||++|||++|++.||||.+..+
T Consensus       290 ~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~  321 (335)
T PTZ00024        290 IDLLQSLLKLNPLERISAKEALKHEYFKSDPL  321 (335)
T ss_pred             HHHHHHHcCCCchhccCHHHHhcCcccCCCCC
Confidence            99999999999999999999999999998765

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-42  Score=319.09  Aligned_cols=253  Identities=25%  Similarity=0.439  Sum_probs=217.0

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeec---cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeC
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEK  125 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~  125 (379)
                      +.||+|.||+||-|.++.+|+.||||++.+   ..+.......|+.+++.+     +||.|+.+...|++.+.+|+|||-
T Consensus       570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l-----~HPGiV~le~M~ET~ervFVVMEK  644 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNL-----HHPGIVNLECMFETPERVFVVMEK  644 (888)
T ss_pred             hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhc-----CCCCeeEEEEeecCCceEEEEehh
Confidence            689999999999999999999999999964   345567788899999999     889999999999999999999999


Q ss_pred             CCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccC
Q 017021          126 LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  205 (379)
Q Consensus       126 ~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (379)
                      +.|+..+++-+.....+++.....++.||+.||.|||-++|+|+||||+|||+...                        
T Consensus       645 l~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~------------------------  700 (888)
T KOG4236|consen  645 LHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASA------------------------  700 (888)
T ss_pred             hcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccC------------------------
Confidence            98888888766554579999999999999999999999999999999999999432                        


Q ss_pred             CCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHH
Q 017021          206 PKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER  283 (379)
Q Consensus       206 ~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~  283 (379)
                      +....+||||||+|+.....+  ++.+||+.|+|||++.+..|...-|+||+|||+|.-++|..||....+..  .+|++
T Consensus       701 ~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn--dQIQN  778 (888)
T KOG4236|consen  701 SPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN--DQIQN  778 (888)
T ss_pred             CCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchh--HHhhc
Confidence            566789999999999877665  56799999999999999999999999999999999999999997544322  22222


Q ss_pred             HcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCH
Q 017021          284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  363 (379)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta  363 (379)
                                             ..+.+|.                      .-|.+.++.+.|||+.+|+..=.+|.|.
T Consensus       779 -----------------------AaFMyPp----------------------~PW~eis~~AidlIn~LLqVkm~kRysv  813 (888)
T KOG4236|consen  779 -----------------------AAFMYPP----------------------NPWSEISPEAIDLINNLLQVKMRKRYSV  813 (888)
T ss_pred             -----------------------cccccCC----------------------CchhhcCHHHHHHHHHHHHHHHHHhcch
Confidence                                   2222221                      1144678899999999999999999999


Q ss_pred             HHHhcCCCCCCCCc
Q 017021          364 REALRHPFFTRDHL  377 (379)
Q Consensus       364 ~e~l~hp~f~~~~~  377 (379)
                      +..|.|||+++-++
T Consensus       814 dk~lsh~Wlq~yq~  827 (888)
T KOG4236|consen  814 DKSLSHPWLQDYQT  827 (888)
T ss_pred             HhhccchhhhcchH
Confidence            99999999998654

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=1.6e-40  Score=305.94  Aligned_cols=257  Identities=26%  Similarity=0.433  Sum_probs=202.3

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      .....|+++++||+|+||.||+|++..+++.||+|.+.... .....+..|+.++..+     .|++++++++.+..++.
T Consensus         9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   83 (292)
T cd06644           9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATC-----NHPYIVKLLGAFYWDGK   83 (292)
T ss_pred             CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhC-----CCCcEeeeEEEEEeCCe
Confidence            34467999999999999999999999999999999987432 2345566788887777     78999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .|+||||+ +++|..++.+.. ..+++..+..++.|++.||.|||+.|++|||+||+||++                   
T Consensus        84 ~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili-------------------  143 (292)
T cd06644          84 LWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLL-------------------  143 (292)
T ss_pred             EEEEEecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEE-------------------
Confidence            99999999 888988876543 358999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhh-----CCCCCCccchHhHHHHHHHHHhCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                              +.++.++|+|||.+......   .....++..|+|||.+.     ...++.++|+|||||++|+|++|..||
T Consensus       144 --------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~  215 (292)
T cd06644         144 --------TLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH  215 (292)
T ss_pred             --------cCCCCEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCC
Confidence                    44556777777766532221   12345788999999884     344678999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      ...+..+....+.+.  ..+.                    .                        .....++.++.++|
T Consensus       216 ~~~~~~~~~~~~~~~--~~~~--------------------~------------------------~~~~~~~~~~~~li  249 (292)
T cd06644         216 HELNPMRVLLKIAKS--EPPT--------------------L------------------------SQPSKWSMEFRDFL  249 (292)
T ss_pred             ccccHHHHHHHHhcC--CCcc--------------------C------------------------CCCcccCHHHHHHH
Confidence            765543332222111  0000                    0                        00123556889999


Q ss_pred             hhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          350 QGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      .+||+.||++||+++|+++||||...
T Consensus       250 ~~~l~~~p~~Rp~~~~il~~~~~~~~  275 (292)
T cd06644         250 KTALDKHPETRPSAAQLLEHPFVSSV  275 (292)
T ss_pred             HHHhcCCcccCcCHHHHhcCcccccc
Confidence            99999999999999999999999853

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=8.1e-41  Score=314.95  Aligned_cols=279  Identities=26%  Similarity=0.487  Sum_probs=218.9

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce--
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH--  118 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~--  118 (379)
                      .|++.+.||+|++|.||+|++..+++.||+|++...   .........|+.+++.+     .|++++.+.+.+...+.  
T Consensus        16 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07851          16 RYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHM-----DHENVIGLLDVFTPASSLE   90 (343)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhc-----cCCCHHHHHHHhhcccccc
Confidence            578889999999999999999999999999998642   22334556788888887     67899998887766544  


Q ss_pred             ----EEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          119 ----ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       119 ----~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                          .++|+||++++|.+++...   .+++..+..++.|++.||.|||+.|++||||+|+||++                
T Consensus        91 ~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill----------------  151 (343)
T cd07851          91 DFQDVYLVTHLMGADLNNIVKCQ---KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV----------------  151 (343)
T ss_pred             ccccEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----------------
Confidence                8999999999999998764   48999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                 +.++.++|+|||.+...........++..|+|||.+.+ ..++.++|||||||++|++++|+.||...+
T Consensus       152 -----------~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~  220 (343)
T cd07851         152 -----------NEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSD  220 (343)
T ss_pred             -----------CCCCCEEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence                       44566888888887765544445568889999999865 367899999999999999999999998877


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhh-hhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      ..+....+.+..+.+++.++..+.... ..+...... .              ..    ..........+..+.++|++|
T Consensus       221 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~----~~~~~~~~~~s~~l~dli~~~  281 (343)
T cd07851         221 HIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQ-M--------------PK----KDFKEVFSGANPLAIDLLEKM  281 (343)
T ss_pred             hHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccc-c--------------CC----CCHHHHhccCCHHHHHHHHHh
Confidence            777777777777777776665543221 111110000 0              00    001111224578899999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      |+.||++|||+.++++||||.+-.
T Consensus       282 l~~~P~~Rpt~~ell~h~~~~~~~  305 (343)
T cd07851         282 LVLDPDKRITAAEALAHPYLAEYH  305 (343)
T ss_pred             CCCChhhCCCHHHHhcCCCccccC
Confidence            999999999999999999998654

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=1.3e-40  Score=302.34  Aligned_cols=252  Identities=23%  Similarity=0.374  Sum_probs=197.4

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch-hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ...|++.++||+|+||.||+|.+..+++.||+|+++.... ......+|+.++..+     .|++++++++.+...+..|
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l-----~h~~ii~~~~~~~~~~~~~   82 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDC-----KHSNIVAYFGSYLRRDKLW   82 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhC-----CCCCeeeEEEEEEeCCEEE
Confidence            3478999999999999999999999999999999874432 223455677777776     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      ++|||+ +++|.+++...+  .+++..+..++.|++.||.|||+.|++|+||||+||++                     
T Consensus        83 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili---------------------  139 (267)
T cd06645          83 ICMEFCGGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL---------------------  139 (267)
T ss_pred             EEEeccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---------------------
Confidence            999999 889999987755  68999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhh---CCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                            +..+.++|+|||.+......   .....|+..|+|||.+.   ...++.++|+|||||++|+|++|..||....
T Consensus       140 ------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~  213 (267)
T cd06645         140 ------TDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLH  213 (267)
T ss_pred             ------CCCCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCccccc
Confidence                  44556777777776533222   13346889999999974   4457899999999999999999999986544


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ........... ...+..                   ..                        ....++..+.++|.+||
T Consensus       214 ~~~~~~~~~~~-~~~~~~-------------------~~------------------------~~~~~~~~~~~li~~~l  249 (267)
T cd06645         214 PMRALFLMTKS-NFQPPK-------------------LK------------------------DKMKWSNSFHHFVKMAL  249 (267)
T ss_pred             chhhHHhhhcc-CCCCCc-------------------cc------------------------ccCCCCHHHHHHHHHHc
Confidence            32221111110 000000                   00                        00124567899999999


Q ss_pred             ccCCCCCcCHHHHhcCCC
Q 017021          354 RYDPTDRLTAREALRHPF  371 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~  371 (379)
                      +.||++|||++++++|||
T Consensus       250 ~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         250 TKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             cCCchhCcCHHHHhcCCC
Confidence            999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.3e-40  Score=307.15  Aligned_cols=254  Identities=25%  Similarity=0.393  Sum_probs=202.6

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ....|++.+.||+|++|.||+|.+..+++.||+|.+.... .....+..|+.++..+     .|+|++.+.+.+..+.+.
T Consensus        18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~-----~h~~v~~~~~~~~~~~~~   92 (296)
T cd06654          18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-----KNPNIVNYLDSYLVGDEL   92 (296)
T ss_pred             cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhC-----CCCCEeeEEEEEEeCCEE
Confidence            3357888899999999999999999999999999987432 2234566788887776     779999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++...   .++..++..++.|++.||.|||+.|++||||||+||+++                   
T Consensus        93 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~-------------------  150 (296)
T cd06654          93 WVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG-------------------  150 (296)
T ss_pred             EEeecccCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc-------------------
Confidence            9999999 89999998654   478999999999999999999999999999999999994                   


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                              .++.++|+|||.+.......   ....|++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+..
T Consensus       151 --------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~  222 (296)
T cd06654         151 --------MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL  222 (296)
T ss_pred             --------CCCCEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                    44567777777665432221   2346888999999998888899999999999999999999999765543


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      ......... +..+                     .+                        .....+..+.++|.+||+.
T Consensus       223 ~~~~~~~~~-~~~~---------------------~~------------------------~~~~~~~~l~~li~~~l~~  256 (296)
T cd06654         223 RALYLIATN-GTPE---------------------LQ------------------------NPEKLSAIFRDFLNRCLDM  256 (296)
T ss_pred             HhHHHHhcC-CCCC---------------------CC------------------------CccccCHHHHHHHHHHCcC
Confidence            322111110 0000                     00                        0113456789999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||++|||+.++++||||...
T Consensus       257 ~p~~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         257 DVEKRGSAKELLQHQFLKIA  276 (296)
T ss_pred             CcccCcCHHHHhhChhhhcc
Confidence            99999999999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.6e-40  Score=312.85  Aligned_cols=279  Identities=27%  Similarity=0.478  Sum_probs=217.8

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc---
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN---  117 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~---  117 (379)
                      .|++.+.||+|+||.||+|.+..++..||+|++...   ......+..|+.++..+     .|++++.+.+.+....   
T Consensus        16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07880          16 RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-----KHENVIGLLDVFTPDLSLD   90 (343)
T ss_pred             ceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-----CCCCccceeeeecCCcccc
Confidence            578889999999999999999999999999998532   22234566788888888     7789999999887543   


Q ss_pred             ---eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          118 ---HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       118 ---~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                         ..++||++++++|.+++...   .+++..+..++.|++.||.|||+.|++||||||+||++                
T Consensus        91 ~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill----------------  151 (343)
T cd07880          91 RFHDFYLVMPFMGTDLGKLMKHE---KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAV----------------  151 (343)
T ss_pred             ccceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----------------
Confidence               46999999998999888653   58999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                 ..++.++|+|||.+...........++..|+|||.+.+ ..++.++|+|||||++|++++|+.||...+
T Consensus       152 -----------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~  220 (343)
T cd07880         152 -----------NEDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHD  220 (343)
T ss_pred             -----------cCCCCEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                       44566888888888765544444567889999999876 457899999999999999999999999877


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      .......+.+..+..+..+...+............                 .... ...........+..+.++|.+||
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~-~~~~~~~~~~~~~~~~~li~~~l  282 (343)
T cd07880         221 HLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKL-----------------PRFR-KKDFRSLLPNANPLAVNVLEKML  282 (343)
T ss_pred             HHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhc-----------------cccC-cchHHHhccCCChHHHHHHHHHc
Confidence            76666666676677776665554322111000000                 0000 01112233456788999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +.||++|||+.+++.||||+.-
T Consensus       283 ~~dP~~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         283 VLDAESRITAAEALAHPYFEEF  304 (343)
T ss_pred             CCChhhCCCHHHHhcCccHhhh
Confidence            9999999999999999999763

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.2e-40  Score=313.02  Aligned_cols=279  Identities=29%  Similarity=0.504  Sum_probs=213.9

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec----
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR----  116 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~----  116 (379)
                      .|++.+.||+|+||.||+|.+..+++.||+|.+...   .........|+.++..+     +|+|++++++++...    
T Consensus         6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~ni~~~~~~~~~~~~~~   80 (337)
T cd07858           6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHL-----DHENVIAIKDIMPPPHREA   80 (337)
T ss_pred             ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhc-----CCCCccchHHheecccccc
Confidence            588889999999999999999999999999998642   22234556788888877     679999999987654    


Q ss_pred             -ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          117 -NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       117 -~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                       ...|+++||++++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||+++                
T Consensus        81 ~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~----------------  142 (337)
T cd07858          81 FNDVYIVYELMDTDLHQIIRSSQ--TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN----------------  142 (337)
T ss_pred             cCcEEEEEeCCCCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc----------------
Confidence             3589999999889999987654  699999999999999999999999999999999999994                


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                 .++.++|+|||.+......   .....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+
T Consensus       143 -----------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  211 (337)
T cd07858         143 -----------ANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPG  211 (337)
T ss_pred             -----------CCCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCC
Confidence                       4455677777766543322   123457889999998865 4588999999999999999999999988


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhh-hhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVD-RHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      .+..+....+....+.++...+.... .....+...                 ....+.  .......+..+..+.++|+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~~~~~~~~~~~li~  272 (337)
T cd07858         212 KDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRS-----------------LPYTPR--QSFARLFPHANPLAIDLLE  272 (337)
T ss_pred             CChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHh-----------------cCcccc--cCHHHHcccCCHHHHHHHH
Confidence            87777777777777777665543211 111111110                 000000  0011122356788999999


Q ss_pred             hccccCCCCCcCHHHHhcCCCCCCC
Q 017021          351 GLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +||+.||++|||++|+++||||...
T Consensus       273 ~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         273 KMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             HHhcCChhhccCHHHHHcCcchhhh
Confidence            9999999999999999999999764

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=2.1e-40  Score=298.71  Aligned_cols=250  Identities=27%  Similarity=0.451  Sum_probs=202.2

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      ..|++.++||+|++|.||+|.+..+++.+|+|.++.... ...+.+|+.+++.+     .|++++++.+.+..+...|++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l-----~~~~i~~~~~~~~~~~~~~l~   76 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQC-----DSPYIVKYYGSYFKNTDLWIV   76 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhC-----CCCcEeeeeeeeecCCcEEEE
Confidence            468899999999999999999998899999999975433 56777888888887     789999999999999999999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      +||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++|||++|+||+++                      
T Consensus        77 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~----------------------  133 (256)
T cd06612          77 MEYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN----------------------  133 (256)
T ss_pred             EecCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC----------------------
Confidence            9999 889999987644 3689999999999999999999999999999999999994                      


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  278 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~  278 (379)
                           .++.++|+|||.+.......   ....++..|+|||.+.+..++.++||||||+++|+|++|+.||.........
T Consensus       134 -----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~  208 (256)
T cd06612         134 -----EEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI  208 (256)
T ss_pred             -----CCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh
Confidence                 44567777777765433221   2345788999999999888999999999999999999999999764432211


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCC
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  358 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  358 (379)
                      ..+..  ...+                  ..                          .....++..+.++|.+||+.||+
T Consensus       209 ~~~~~--~~~~------------------~~--------------------------~~~~~~~~~~~~~i~~~l~~~P~  242 (256)
T cd06612         209 FMIPN--KPPP------------------TL--------------------------SDPEKWSPEFNDFVKKCLVKDPE  242 (256)
T ss_pred             hhhcc--CCCC------------------CC--------------------------CchhhcCHHHHHHHHHHHhcChh
Confidence            11000  0000                  00                          00112456899999999999999


Q ss_pred             CCcCHHHHhcCCCC
Q 017021          359 DRLTAREALRHPFF  372 (379)
Q Consensus       359 ~Rpta~e~l~hp~f  372 (379)
                      +|||+.|+++||||
T Consensus       243 ~Rps~~~il~~~~~  256 (256)
T cd06612         243 ERPSAIQLLQHPFI  256 (256)
T ss_pred             hCcCHHHHhcCCCC
Confidence            99999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=1.7e-40  Score=299.65  Aligned_cols=249  Identities=27%  Similarity=0.434  Sum_probs=203.0

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.+.||+|+||.||++.+..+++.||+|.+...   ......+..|+.+++.+     .|++++.+.+.+...++.+
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNM-----KHPNIVQYQESFEENGNLY   75 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhC-----CCCCeeeeEeeecCCCeEE
Confidence            378889999999999999999999999999998632   23344667788888887     6799999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +|+||+ +++|.+.+.......+++..+..++.|++.||.|||+.|++|+||+|+||++                     
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~---------------------  134 (256)
T cd08218          76 IVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---------------------  134 (256)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---------------------
Confidence            999999 8899999977544457899999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            +.+..++|+|||.+.......   ....|+..|+|||.+.+..++.++|+|||||++++|++|+.||...+..+
T Consensus       135 ------~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~  208 (256)
T cd08218         135 ------TKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN  208 (256)
T ss_pred             ------cCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH
Confidence                  445567888888775433321   22457888999999988888999999999999999999999997655443


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+..  +..+.                                              .....+.++.++|.+||+.+
T Consensus       209 ~~~~~~~--~~~~~----------------------------------------------~~~~~~~~~~~li~~~l~~~  240 (256)
T cd08218         209 LVLKIIR--GSYPP----------------------------------------------VSSHYSYDLRNLVSQLFKRN  240 (256)
T ss_pred             HHHHHhc--CCCCC----------------------------------------------CcccCCHHHHHHHHHHhhCC
Confidence            3322211  11100                                              01235678999999999999


Q ss_pred             CCCCcCHHHHhcCCCC
Q 017021          357 PTDRLTAREALRHPFF  372 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f  372 (379)
                      |++||++.++++||||
T Consensus       241 p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         241 PRDRPSVNSILEKNFI  256 (256)
T ss_pred             hhhCcCHHHHhhCcCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=7e-41  Score=309.18  Aligned_cols=255  Identities=26%  Similarity=0.401  Sum_probs=202.3

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      .....|++.++||+|++|.||++.+..+++.||+|.+.... .....+..|+.+++.+     .|++++.+++.+..++.
T Consensus        16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~   90 (297)
T cd06656          16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMREN-----KNPNIVNYLDSYLVGDE   90 (297)
T ss_pred             ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhC-----CCCCEeeEEEEEecCCE
Confidence            34467889999999999999999999999999999997432 2334556677777776     78999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .|+||||+ +++|.+++...   .+++..+..++.|++.||.|||+.|++||||||+||+++                  
T Consensus        91 ~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~------------------  149 (297)
T cd06656          91 LWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLG------------------  149 (297)
T ss_pred             EEEeecccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC------------------
Confidence            99999999 99999998764   488999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                               .++.++|+|||.+.......   ....+++.|+|||.+.+..++.++|+|||||++|++++|..||...+.
T Consensus       150 ---------~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~  220 (297)
T cd06656         150 ---------MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP  220 (297)
T ss_pred             ---------CCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence                     44567777777665432221   234678899999999988899999999999999999999999976443


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      ......+... +.++                     .                        ......+..+.+++.+||+
T Consensus       221 ~~~~~~~~~~-~~~~---------------------~------------------------~~~~~~~~~~~~li~~~l~  254 (297)
T cd06656         221 LRALYLIATN-GTPE---------------------L------------------------QNPERLSAVFRDFLNRCLE  254 (297)
T ss_pred             chheeeeccC-CCCC---------------------C------------------------CCccccCHHHHHHHHHHcc
Confidence            2211110000 0000                     0                        0011245678999999999


Q ss_pred             cCCCCCcCHHHHhcCCCCCCC
Q 017021          355 YDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      .||++||+++++++||||...
T Consensus       255 ~~p~~Rps~~~il~~~~~~~~  275 (297)
T cd06656         255 MDVDRRGSAKELLQHPFLKLA  275 (297)
T ss_pred             CChhhCcCHHHHhcCchhccc
Confidence            999999999999999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=9.6e-41  Score=313.85  Aligned_cols=251  Identities=21%  Similarity=0.320  Sum_probs=190.5

Q ss_pred             echhhhhhhhccccccceeEEEEEe-----cCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWD-----RERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~-----~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      ++...|++.++||+|+||.||+|.+     ..+++.||+|+++...  .....+..|+.++..+.    +|+||+.++++
T Consensus         4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~niv~~~~~   79 (338)
T cd05102           4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIG----NHLNVVNLLGA   79 (338)
T ss_pred             cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhc----cCcceeeEEeE
Confidence            4556789999999999999999975     3446789999997432  23355777888888773    57899999998


Q ss_pred             eeec-ceEEEEEeCC-CCCHHHHHHhCC----------------------------------------------------
Q 017021          113 FDYR-NHICIVFEKL-GSSLYDFLRKNN----------------------------------------------------  138 (379)
Q Consensus       113 ~~~~-~~~~lv~e~~-~~sL~~~l~~~~----------------------------------------------------  138 (379)
                      +... ..++++|||+ +|+|.+++....                                                    
T Consensus        80 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (338)
T cd05102          80 CTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNP  159 (338)
T ss_pred             ecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccccc
Confidence            7654 4689999999 999999987532                                                    


Q ss_pred             --------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCC
Q 017021          139 --------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA  210 (379)
Q Consensus       139 --------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (379)
                              ...+++..+..++.||+.||.|||+.||+||||||+||+++                           .++.
T Consensus       160 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~---------------------------~~~~  212 (338)
T cd05102         160 PQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS---------------------------ENNV  212 (338)
T ss_pred             chhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEc---------------------------CCCc
Confidence                    12477888899999999999999999999999999999994                           4456


Q ss_pred             eEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHH
Q 017021          211 IKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERV  284 (379)
Q Consensus       211 ~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~  284 (379)
                      ++|+|||++.......     ....++..|+|||++.+..++.++|||||||++|+|++ |..||......+........
T Consensus       213 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~  292 (338)
T cd05102         213 VKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD  292 (338)
T ss_pred             EEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc
Confidence            7777777765432211     12345678999999998889999999999999999997 99999764432221111000


Q ss_pred             cCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHH
Q 017021          285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  364 (379)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~  364 (379)
                       +..                    ..                          .....++++.+++.+||+.||++|||+.
T Consensus       293 -~~~--------------------~~--------------------------~~~~~~~~l~~li~~cl~~dp~~RPs~~  325 (338)
T cd05102         293 -GTR--------------------MR--------------------------APENATPEIYRIMLACWQGDPKERPTFS  325 (338)
T ss_pred             -CCC--------------------CC--------------------------CCCCCCHHHHHHHHHHccCChhhCcCHH
Confidence             000                    00                          0123566899999999999999999999


Q ss_pred             HHhc
Q 017021          365 EALR  368 (379)
Q Consensus       365 e~l~  368 (379)
                      |+++
T Consensus       326 el~~  329 (338)
T cd05102         326 ALVE  329 (338)
T ss_pred             HHHH
Confidence            9985

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=1.3e-40  Score=307.33  Aligned_cols=253  Identities=28%  Similarity=0.417  Sum_probs=204.3

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ....|++.++||.|++|.||++.+..+++.||+|.+.... .....+..|+..++.+     .|+|++.+++.+..++..
T Consensus        17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~   91 (296)
T cd06655          17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKEL-----KNPNIVNFLDSFLVGDEL   91 (296)
T ss_pred             CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhc-----CCCceeeeeeeEecCceE
Confidence            3456888899999999999999999999999999986432 2345566788888777     779999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+|+||+ +++|.+++...   .+++.++..++.|++.||.|||+.|++||||+|+||+++                   
T Consensus        92 ~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~-------------------  149 (296)
T cd06655          92 FVVMEYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG-------------------  149 (296)
T ss_pred             EEEEEecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-------------------
Confidence            9999999 99999988764   489999999999999999999999999999999999994                   


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                              .++.++|+|||.+.......   ....|+..|+|||.+.+..++.++|+|||||++|+|++|+.||...+..
T Consensus       150 --------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~  221 (296)
T cd06655         150 --------MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL  221 (296)
T ss_pred             --------CCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                    45567777777665433221   2346788999999998888999999999999999999999999876654


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.....+..                                              ......++.+.++|++||+.
T Consensus       222 ~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~~l~~  255 (296)
T cd06655         222 RALYLIATNGTPEL----------------------------------------------QNPEKLSPIFRDFLNRCLEM  255 (296)
T ss_pred             HHHHHHHhcCCccc----------------------------------------------CCcccCCHHHHHHHHHHhhc
Confidence            43322211110000                                              00123567899999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~  374 (379)
                      ||.+|||+.+++.||||+.
T Consensus       256 dp~~Rpt~~~il~~~~~~~  274 (296)
T cd06655         256 DVEKRGSAKELLQHPFLKL  274 (296)
T ss_pred             ChhhCCCHHHHhhChHhhh
Confidence            9999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-40  Score=307.87  Aligned_cols=285  Identities=29%  Similarity=0.499  Sum_probs=209.3

Q ss_pred             hhhhhccccccceeEEEEEecC--CCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec--
Q 017021           45 DKIHSKMGEGTFGQVLECWDRE--RKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--  116 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~--~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~--  116 (379)
                      |++.++||+|++|.||+|.++.  +++.||+|.+...    .........|+.++..+     .|++++++++++...  
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   76 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL-----KHENVVSLVEVFLEHAD   76 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc-----CCCCccceEEEEeCCCC
Confidence            7788999999999999999988  8999999999752    23345566788888887     779999999999888  


Q ss_pred             ceEEEEEeCCCCCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          117 NHICIVFEKLGSSLYDFLRKNN---YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       117 ~~~~lv~e~~~~sL~~~l~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      ...++||||+++++.+++....   ...+++..+..++.|++.||+|||+.|++||||||+||+++.++           
T Consensus        77 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~-----------  145 (316)
T cd07842          77 KSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEG-----------  145 (316)
T ss_pred             ceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCC-----------
Confidence            8899999999878888875432   12588999999999999999999999999999999999996521           


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~  266 (379)
                                  +..+.++|+|||.+.......      ....+|..|+|||.+.+. .++.++|||||||++|+|++|+
T Consensus       146 ------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~  213 (316)
T cd07842         146 ------------PERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLE  213 (316)
T ss_pred             ------------CccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcC
Confidence                        235667777777765432221      234578889999988764 5789999999999999999999


Q ss_pred             CCCCCCchH---------HHHHHHHHHcCCCChhHHHhhhhhhhhhh---ccCCCCCCCCCCchhhhhhhccchhhHHHH
Q 017021          267 ALFQTHENL---------EHLAMMERVLGPLPQHMLKRVDRHAEKYV---RRGRLDWPEGAASRESIKSVMKLPRLQNLI  334 (379)
Q Consensus       267 ~pf~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (379)
                      .||.+....         .....+...++.+....+....+..+...   ......++              ........
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~  279 (316)
T cd07842         214 PIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYP--------------SNSLAKWM  279 (316)
T ss_pred             CCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCC--------------CccHHHHH
Confidence            999764432         22334444455555554443322211110   00000000              00000100


Q ss_pred             HHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCC
Q 017021          335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       335 ~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                       ......+..+.+++.+||+.||++|||+.|++.||||
T Consensus       280 -~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         280 -EKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             -HhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence             1113567889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=2.1e-40  Score=300.70  Aligned_cols=248  Identities=27%  Similarity=0.422  Sum_probs=196.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-------hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      .|++.+.||+|+||.||+|.+ .+++.+|+|+++...       .....+..|++++..+     .|+|++++.+++.+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~   74 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-----KHVNIVQYLGTCLDD   74 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-----CCCCEeeEeeEeecC
Confidence            378889999999999999986 578899999986322       1224456688888777     678999999999999


Q ss_pred             ceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          117 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       117 ~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      +..++++||+ +++|.+++.+..  .+++..+..++.|++.||+|||+.|++|+||+|+||+++.++             
T Consensus        75 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~-------------  139 (265)
T cd06631          75 NTISIFMEFVPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNG-------------  139 (265)
T ss_pred             CeEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCC-------------
Confidence            9999999999 899999997754  588999999999999999999999999999999999995544             


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCC---------CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERP---------DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~  266 (379)
                                    .++|+|||.+.....         ......|+..|+|||.+.+..++.++|+|||||++|+|++|.
T Consensus       140 --------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~  205 (265)
T cd06631         140 --------------IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGK  205 (265)
T ss_pred             --------------eEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCC
Confidence                          455555554432110         112245788999999999888999999999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||...+..+....+....+..+.                                              ..+.++.++.
T Consensus       206 ~p~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~  239 (265)
T cd06631         206 PPLASMDRLAAMFYIGAHRGLMPR----------------------------------------------LPDSFSAAAI  239 (265)
T ss_pred             CccccCChHHHHHHhhhccCCCCC----------------------------------------------CCCCCCHHHH
Confidence            999765544333222221111110                                              1124567899


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      ++|++||+.||++||++.|+++||||
T Consensus       240 ~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         240 DFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             HHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            99999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=1.7e-40  Score=303.83  Aligned_cols=256  Identities=23%  Similarity=0.387  Sum_probs=198.1

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .|++.+.||+|+||.||+|.+..+++.||+|.+...  ......+..|+.++.++     +|++++++++.+...+..++
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~l   76 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKC-----DSPYIIGFYGAFFVENRISI   76 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhC-----CCCCeeeEEEEEEECCEEEE
Confidence            467889999999999999999999999999998643  22345567788888887     78999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      ||||+ +++|..+.      .+++..+..++.|++.||.|||+.|++|+||||+||++                      
T Consensus        77 v~e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill----------------------  128 (279)
T cd06619          77 CTEFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLV----------------------  128 (279)
T ss_pred             EEecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEE----------------------
Confidence            99999 78875431      47888999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCcccccCCC-CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  279 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~  279 (379)
                           +.++.++|+|||.+...... .....||..|+|||.+.+..++.++|+|||||++|+|++|+.||......+.. 
T Consensus       129 -----~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~-  202 (279)
T cd06619         129 -----NTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS-  202 (279)
T ss_pred             -----CCCCCEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc-
Confidence                 45566788888877543322 23457899999999998888999999999999999999999999653211100 


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                             ..+......+       ........                         .....+.++.++|.+||+.||++
T Consensus       203 -------~~~~~~~~~~-------~~~~~~~~-------------------------~~~~~~~~~~~li~~~l~~~P~~  243 (279)
T cd06619         203 -------LMPLQLLQCI-------VDEDPPVL-------------------------PVGQFSEKFVHFITQCMRKQPKE  243 (279)
T ss_pred             -------cchHHHHHHH-------hccCCCCC-------------------------CCCcCCHHHHHHHHHHhhCChhh
Confidence                   0000000000       00000000                         01134568999999999999999


Q ss_pred             CcCHHHHhcCCCCCCCCc
Q 017021          360 RLTAREALRHPFFTRDHL  377 (379)
Q Consensus       360 Rpta~e~l~hp~f~~~~~  377 (379)
                      ||+++|++.||||...+.
T Consensus       244 Rp~~~eil~~~~~~~~~~  261 (279)
T cd06619         244 RPAPENLMDHPFIVQYND  261 (279)
T ss_pred             CCCHHHHhcCcccccccC
Confidence            999999999999986543

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-40  Score=299.70  Aligned_cols=249  Identities=25%  Similarity=0.442  Sum_probs=193.8

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhh----HhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~----~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.||+|+||.||+|.+..+++.||+|++.......    .....|...+    .....|++++++++.+..++..|+++|
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~----~~~~~~~~i~~~~~~~~~~~~~~lv~e   77 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIM----MIQGESPYVAKLYYSFQSKDYLYLVME   77 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHH----hhcCCCCCeeeeeeeEEcCCeEEEEEe
Confidence            67999999999999999999999999986432211    1122232222    222377999999999999999999999


Q ss_pred             CC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          125 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                      |+ +++|.+++....  .+++..+..++.|++.||.|||+.|++||||+|+||++                         
T Consensus        78 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~-------------------------  130 (260)
T cd05611          78 YLNGGDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI-------------------------  130 (260)
T ss_pred             ccCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE-------------------------
Confidence            99 999999998754  58999999999999999999999999999999999999                         


Q ss_pred             cCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHH
Q 017021          204 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER  283 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~  283 (379)
                        +.+..++|+|||.+..... .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+..+....+..
T Consensus       131 --~~~~~~~l~dfg~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  207 (260)
T cd05611         131 --DQTGHLKLTDFGLSRNGLE-NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILS  207 (260)
T ss_pred             --CCCCcEEEeecccceeccc-cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence              4455678888887754332 2334678899999999888889999999999999999999999987655443332221


Q ss_pred             HcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCH
Q 017021          284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  363 (379)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta  363 (379)
                      ...                       .++.                      ......+..+.++|.+||+.||++|||+
T Consensus       208 ~~~-----------------------~~~~----------------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~  242 (260)
T cd05611         208 RRI-----------------------NWPE----------------------EVKEFCSPEAVDLINRLLCMDPAKRLGA  242 (260)
T ss_pred             ccc-----------------------CCCC----------------------cccccCCHHHHHHHHHHccCCHHHccCC
Confidence            110                       0100                      0011356789999999999999999955


Q ss_pred             ---HHHhcCCCCCCCC
Q 017021          364 ---REALRHPFFTRDH  376 (379)
Q Consensus       364 ---~e~l~hp~f~~~~  376 (379)
                         +|++.||||++.+
T Consensus       243 ~~~~~~l~~~~~~~~~  258 (260)
T cd05611         243 NGYQEIKSHPFFKSIN  258 (260)
T ss_pred             CcHHHHHcChHhhcCC
Confidence               7999999998754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=1.2e-40  Score=312.78  Aligned_cols=281  Identities=27%  Similarity=0.487  Sum_probs=215.9

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee----
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----  115 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~----  115 (379)
                      ..|++.+.||+|++|.||+|.++.+++.||+|++....   .....+..|+.++..+     .|++++++++++..    
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~   79 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHF-----KHDNIIAIRDILRPPGAD   79 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhc-----CCCCccCHHHhccccCCC
Confidence            56888899999999999999999999999999987432   2334556788888887     67999999888763    


Q ss_pred             cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          116 RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       116 ~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      ....++||||++++|.+++....  .+++..+..++.||+.||.|||+.|++||||||+||+++.               
T Consensus        80 ~~~~~lv~e~~~~~l~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~---------------  142 (334)
T cd07855          80 FKDVYVVMDLMESDLHHIIHSDQ--PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNE---------------  142 (334)
T ss_pred             CceEEEEEehhhhhHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC---------------
Confidence            45789999999889999987654  5899999999999999999999999999999999999944               


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCC-------CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                                  ++.++|+|||.+.......       ....|+..|+|||.+.+ ..++.++|||||||++|+|++|+.
T Consensus       143 ------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~  210 (334)
T cd07855         143 ------------DCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQ  210 (334)
T ss_pred             ------------CCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCC
Confidence                        4556666666654322111       12367889999999865 457899999999999999999999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhh-hhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDR-HAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      ||...+.......+....+.++...+..+.. .........    +....               ..........+.++.
T Consensus       211 pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~---------------~~~~~~~~~~~~~~~  271 (334)
T cd07855         211 LFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNL----PRKQP---------------VPWSKIFPKASPEAL  271 (334)
T ss_pred             ccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhc----ccCCC---------------CCHHHHcccCCHHHH
Confidence            9998877777777777788877776654322 111111110    00000               000112234578899


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ++|++||+.||++|||+++++.||||....
T Consensus       272 ~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~  301 (334)
T cd07855         272 DLLSQMLQFDPEERITVEQALQHPFLAQYH  301 (334)
T ss_pred             HHHHHHccCChhhCcCHHHHHhChhhhhcc
Confidence            999999999999999999999999997543

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=2.6e-40  Score=302.22  Aligned_cols=254  Identities=27%  Similarity=0.409  Sum_probs=202.9

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ...|++.++||.|+||.||+|.+..+++.||+|.+....  .....+..|+.++..+     .|++++++++.+.++...
T Consensus         3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   77 (277)
T cd06640           3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYVTKYYGSYLKGTKL   77 (277)
T ss_pred             HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEECCEE
Confidence            356888999999999999999999999999999987432  2334556677777776     779999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++...   .+++..+..++.|++.||+|||+.+++|+||+|+||+++                   
T Consensus        78 ~lv~e~~~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~-------------------  135 (277)
T cd06640          78 WIIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS-------------------  135 (277)
T ss_pred             EEEEecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc-------------------
Confidence            9999999 88999998754   488999999999999999999999999999999999994                   


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                              .++.++|+|||.+......   .....++..|+|||.+.+..++.++|+|||||++|+|++|..||......
T Consensus       136 --------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~  207 (277)
T cd06640         136 --------EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM  207 (277)
T ss_pred             --------CCCCEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH
Confidence                    4455677777766433221   12345788899999998888999999999999999999999999765443


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      .....+...  ..+                                              ......+..+.+++.+||+.
T Consensus       208 ~~~~~~~~~--~~~----------------------------------------------~~~~~~~~~~~~li~~~l~~  239 (277)
T cd06640         208 RVLFLIPKN--NPP----------------------------------------------TLTGEFSKPFKEFIDACLNK  239 (277)
T ss_pred             hHhhhhhcC--CCC----------------------------------------------CCchhhhHHHHHHHHHHccc
Confidence            222111100  000                                              00112456788999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCCCcC
Q 017021          356 DPTDRLTAREALRHPFFTRDHLR  378 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~~~~  378 (379)
                      ||++||++.++++||||.....|
T Consensus       240 ~p~~Rp~~~~il~~~~~~~~~~~  262 (277)
T cd06640         240 DPSFRPTAKELLKHKFIVKNAKK  262 (277)
T ss_pred             CcccCcCHHHHHhChHhhhcchh
Confidence            99999999999999999887654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-40  Score=303.89  Aligned_cols=279  Identities=33%  Similarity=0.614  Sum_probs=214.6

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.+.||+|++|.||+|.++.+++.||+|+++..   ......+..|++++..+     .|++++.+.+.+..++..+
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   76 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL-----RHENIVNLKEAFRRKGRLY   76 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhc-----CCCCeeehhheEEECCEEE
Confidence            478889999999999999999999999999998642   23345677889988888     6799999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      ++|||+++++.+.+..+. ..++...+..++.||+.||.|||+.|++|+|++|+||++                      
T Consensus        77 iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~----------------------  133 (288)
T cd07833          77 LVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV----------------------  133 (288)
T ss_pred             EEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----------------------
Confidence            999999545544444332 258999999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                           +.++.++|+|||.+.......    ....++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...+..
T Consensus       134 -----~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~  208 (288)
T cd07833         134 -----SESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI  208 (288)
T ss_pred             -----CCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                 455667888888776443332    234578889999999887 7889999999999999999999999887777


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+....+..+...............    ...++             ...............+.++.++|++||..
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~  271 (288)
T cd07833         209 DQLYLIQKCLGPLPPSHQELFSSNPRFAG----VAFPE-------------PSQPESLERRYPGKVSSPALDFLKACLRM  271 (288)
T ss_pred             HHHHHHHHHhCCCCHHHhhhcccCccccc----cccCC-------------CCCcHHHHHhcCCccchHHHHHHHHHhcc
Confidence            77777777777776654443221110000    00000             00011111112233578899999999999


Q ss_pred             CCCCCcCHHHHhcCCCC
Q 017021          356 DPTDRLTAREALRHPFF  372 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f  372 (379)
                      ||++|||++++++||||
T Consensus       272 ~p~~Rps~~~il~~~~f  288 (288)
T cd07833         272 DPKERLTCDELLQHPYF  288 (288)
T ss_pred             CchhcccHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=2.4e-40  Score=300.45  Aligned_cols=247  Identities=28%  Similarity=0.437  Sum_probs=196.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccch----------hhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----------~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      .|.+...||+|++|.||+|.+..+++.||+|.+.....          ....+..|+.++.++     .|++++++++++
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~   75 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-----QHENIVQYLGSS   75 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-----CCCCeeeEEEEE
Confidence            36778999999999999999999999999998863211          123456678888887     779999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      ......++++||+ +++|.+++....  .++...+..++.|++.||+|||+.|++||||+|+||+++.++          
T Consensus        76 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~----------  143 (267)
T cd06628          76 LDADHLNIFLEYVPGGSVAALLNNYG--AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKG----------  143 (267)
T ss_pred             EeCCccEEEEEecCCCCHHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCC----------
Confidence            9999999999999 889999998754  688999999999999999999999999999999999995444          


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCC---------CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHH
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC  263 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~  263 (379)
                                       .++|+|||.+......         .....|+..|+|||.+.+..++.++|+|||||++|+|+
T Consensus       144 -----------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~  206 (267)
T cd06628         144 -----------------GIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEML  206 (267)
T ss_pred             -----------------CEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHh
Confidence                             4555555554432211         12235788999999998888899999999999999999


Q ss_pred             hCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchh
Q 017021          264 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  343 (379)
Q Consensus       264 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (379)
                      +|+.||...+.......+....  .+                                              ......+.
T Consensus       207 ~g~~p~~~~~~~~~~~~~~~~~--~~----------------------------------------------~~~~~~~~  238 (267)
T cd06628         207 TGKHPFPDCTQLQAIFKIGENA--SP----------------------------------------------EIPSNISS  238 (267)
T ss_pred             hCCCCCCCccHHHHHHHHhccC--CC----------------------------------------------cCCcccCH
Confidence            9999998654433222111110  00                                              00123567


Q ss_pred             HHHHHHhhccccCCCCCcCHHHHhcCCCC
Q 017021          344 DLTHLLQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       344 ~~~~li~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      .+.++|++||+.||.+||++.|+++||||
T Consensus       239 ~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         239 EAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             HHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            88999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-40  Score=301.33  Aligned_cols=255  Identities=25%  Similarity=0.407  Sum_probs=200.2

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec----
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR----  116 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~----  116 (379)
                      ..-.|++.+.||+|++|.||+|.++.+++.+|+|++.........+..|+.++.++    ..|++++++++++...    
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~----~~h~~i~~~~~~~~~~~~~~   79 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKY----SNHPNIATFYGAFIKKNPPG   79 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHh----cCCCChheEEEEEEecCCCC
Confidence            34578899999999999999999999999999999986655556677888888876    2578999999998654    


Q ss_pred             --ceEEEEEeCC-CCCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          117 --NHICIVFEKL-GSSLYDFLRKNN--YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       117 --~~~~lv~e~~-~~sL~~~l~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                        ...++||||+ +++|.+++....  ...+++..+..++.|++.||.|||+.|++||||+|+||++             
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~-------------  146 (275)
T cd06608          80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILL-------------  146 (275)
T ss_pred             cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE-------------
Confidence              4589999999 889999987532  3468999999999999999999999999999999999999             


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhC-----CCCCCccchHhHHHHHHHHH
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVELC  263 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlG~il~~l~  263 (379)
                                    +.++.++|+|||.+......   .....|+..|+|||.+..     ..++.++|||||||++|+|+
T Consensus       147 --------------~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~  212 (275)
T cd06608         147 --------------TKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELA  212 (275)
T ss_pred             --------------ccCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHH
Confidence                          44556777777776533221   133468889999998753     34678999999999999999


Q ss_pred             hCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchh
Q 017021          264 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  343 (379)
Q Consensus       264 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (379)
                      +|+.||...........+...  ..+ .                   +.                        ....++.
T Consensus       213 ~g~~p~~~~~~~~~~~~~~~~--~~~-~-------------------~~------------------------~~~~~~~  246 (275)
T cd06608         213 DGKPPLCDMHPMRALFKIPRN--PPP-T-------------------LK------------------------SPENWSK  246 (275)
T ss_pred             hCCCCccccchHHHHHHhhcc--CCC-C-------------------CC------------------------chhhcCH
Confidence            999999754433322221110  000 0                   00                        0112567


Q ss_pred             HHHHHHhhccccCCCCCcCHHHHhcCCCC
Q 017021          344 DLTHLLQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       344 ~~~~li~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      .+.++|++||..||++|||+.|+++|||+
T Consensus       247 ~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         247 KFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            89999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.8e-40  Score=311.54  Aligned_cols=279  Identities=26%  Similarity=0.468  Sum_probs=215.6

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec---
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---  116 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~---  116 (379)
                      ..|.+.+.||+|+||.||+|.+..+++.||+|++....   .......+|+.++.++     .|+|++++.+.+...   
T Consensus        17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l-----~h~~iv~~~~~~~~~~~~   91 (345)
T cd07877          17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-----KHENVIGLLDVFTPARSL   91 (345)
T ss_pred             CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHc-----CCCcccceeeeeeecccc
Confidence            35778899999999999999999999999999986432   2234566788888887     779999998887543   


Q ss_pred             ---ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          117 ---NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       117 ---~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                         ...|+++++++++|.+++...   .+++..+..++.|++.||.|||+.|++||||||+||++               
T Consensus        92 ~~~~~~~lv~~~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---------------  153 (345)
T cd07877          92 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---------------  153 (345)
T ss_pred             cccccEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE---------------
Confidence               457899999999999888654   48999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                  +.++.++|+|||.+...........++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...
T Consensus       154 ------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~  221 (345)
T cd07877         154 ------------NEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT  221 (345)
T ss_pred             ------------cCCCCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                        45566888888887655444444578889999999866 46789999999999999999999999887


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhh-hhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAE-KYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      +.......+.+..+..+..+...+..... .+... ....+.                  ..........++.+.++|.+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------------~~~~~~~~~~~~~~~~li~~  282 (345)
T cd07877         222 DHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPK------------------MNFANVFIGANPLAVDLLEK  282 (345)
T ss_pred             CHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHH-hcccCC------------------cchhhhcCCCCHHHHHHHHH
Confidence            77676677777777777666555433221 11110 000000                  00011112356789999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||+.||.+|||+.++++||||++-
T Consensus       283 ~L~~dp~~R~t~~e~l~h~~f~~~  306 (345)
T cd07877         283 MLVLDSDKRITAAQALAHAYFAQY  306 (345)
T ss_pred             HcCCChhhcCCHHHHhcChhhhhc
Confidence            999999999999999999999853

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-40  Score=302.90  Aligned_cols=276  Identities=33%  Similarity=0.583  Sum_probs=217.7

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeeccch---hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      |++.+.||+|++|.||+|.+..+++.+|+|++.....   .......|+.+++.+     .|++++++++.+..+...++
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~   75 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKEL-----NHPNIIKLLDVFRHKGDLYL   75 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHh-----cCCCcchHHHhhccCCCEEE
Confidence            5778999999999999999999999999999864322   345666788888888     67899999999999999999


Q ss_pred             EEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          122 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      ++||+.++|.+++.... ..+++..+..++.|++.||.|||+.|++|+||+|+||++                       
T Consensus        76 v~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili-----------------------  131 (283)
T cd05118          76 VFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI-----------------------  131 (283)
T ss_pred             EEeccCCCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEE-----------------------
Confidence            99999779999887753 368999999999999999999999999999999999999                       


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                          +.++.++|+|||.+.......   ....++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...+..+.
T Consensus       132 ----~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~  207 (283)
T cd05118         132 ----NTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ  207 (283)
T ss_pred             ----CCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                455668888888776444332   224577889999998776 688999999999999999999999988777777


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.+..+.+....+............    +.+....               .......+..+.+++++|.+||+.||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---------------~~~~~~~~~~~~~~~~~i~~~l~~~P  268 (283)
T cd05118         208 LFKIFRTLGTPDPEVWPKFTSLARNYKF----SFPKKAG---------------MPLPKLFPNASPQALDLLSQMLHYDP  268 (283)
T ss_pred             HHHHHHHcCCCchHhcccchhhhhhhhh----hhccccc---------------cCHHHhhhhhCHHHHHHHHHHhccCc
Confidence            6666666666655555554442222111    1111000               00011223467889999999999999


Q ss_pred             CCCcCHHHHhcCCCC
Q 017021          358 TDRLTAREALRHPFF  372 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f  372 (379)
                      .+||++.+++.||||
T Consensus       269 ~~Rp~~~~ll~~~~~  283 (283)
T cd05118         269 HKRITAEQALAHPYF  283 (283)
T ss_pred             ccCcCHHHHhhCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.4e-40  Score=311.64  Aligned_cols=278  Identities=28%  Similarity=0.487  Sum_probs=214.7

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec----
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR----  116 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~----  116 (379)
                      .|.+.+.||+|+||.||+|.+..+|+.||+|++...   ......+..|+.++..+     .|+|++++.+++...    
T Consensus        16 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~~~~   90 (342)
T cd07879          16 RYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHM-----QHENVIGLLDVFTSAVSGD   90 (342)
T ss_pred             ceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhc-----CCCCccchhheecccccCC
Confidence            567779999999999999999999999999998642   22234566788888887     779999999988754    


Q ss_pred             --ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          117 --NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       117 --~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                        ...++|+||+..+|.+++.    ..+++..+..++.|++.||+|||+.|++||||||+||++                
T Consensus        91 ~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll----------------  150 (342)
T cd07879          91 EFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAV----------------  150 (342)
T ss_pred             CCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----------------
Confidence              3469999999778877653    258899999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                 +.++.++|+|||.+...........++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+.+
T Consensus       151 -----------~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~  219 (342)
T cd07879         151 -----------NEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD  219 (342)
T ss_pred             -----------CCCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                       45567888888887655444444567889999999866 457899999999999999999999999877


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      .......+....+..+..+.+.+...............+                  ...........+..+.++|++||
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~li~~~l  281 (342)
T cd07879         220 YLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYP------------------RKDFSTLFPKASPQAVDLLEKML  281 (342)
T ss_pred             HHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcc------------------cchHHHHhcCCCHHHHHHHHHHc
Confidence            777777777777777666655543322111110000000                  00011112345678999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +.||++||++++++.||||...
T Consensus       282 ~~dP~~R~~~~e~l~h~~f~~~  303 (342)
T cd07879         282 ELDVDKRLTATEALEHPYFDSF  303 (342)
T ss_pred             CCChhhCcCHHHHhcCcchhhc
Confidence            9999999999999999999764

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.6e-40  Score=304.80  Aligned_cols=256  Identities=21%  Similarity=0.354  Sum_probs=202.9

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .|++.+.||+|+||.||++.+..+++.||+|.+...  ......+.+|+.++.++     .|+|++++++.+..++..++
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~l   76 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKA-----VSPYIVDFYGAFFIEGAVYM   76 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhc-----CCCcHHhhhhheecCCeEEE
Confidence            588999999999999999999999999999988642  22335667788888877     77999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          122 VFEKL-GSSLYDFLRKNN-YRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      ||||+ +++|.+++.... ...+++..+..++.|++.||.|||+ .|++||||||+||++                    
T Consensus        77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~--------------------  136 (286)
T cd06622          77 CMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLV--------------------  136 (286)
T ss_pred             EEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEE--------------------
Confidence            99999 889999887631 2358999999999999999999996 599999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCC-CCCcccccCCccchhhhhCC------CCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERP-DQNYIVSTRHYRAPEVILGL------GWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~-~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                             +.++.++|+|||.+..... ......++..|+|||.+.+.      .++.++|+|||||++|+|++|+.||..
T Consensus       137 -------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  209 (286)
T cd06622         137 -------NGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPP  209 (286)
T ss_pred             -------CCCCCEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCC
Confidence                   4456678888887754322 22334578899999998543      357899999999999999999999976


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .........+.......+.                                             .....++.++.++|.+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~li~~  244 (286)
T cd06622         210 ETYANIFAQLSAIVDGDPP---------------------------------------------TLPSGYSDDAQDFVAK  244 (286)
T ss_pred             cchhhHHHHHHHHhhcCCC---------------------------------------------CCCcccCHHHHHHHHH
Confidence            5443333333222211110                                             0112356789999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ||+.||++||++++++.||||....
T Consensus       245 ~l~~~p~~Rp~~~~l~~~~~~~~~~  269 (286)
T cd06622         245 CLNKIPNRRPTYAQLLEHPWLVKYK  269 (286)
T ss_pred             HcccCcccCCCHHHHhcChhhhhcc
Confidence            9999999999999999999997643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6e-42  Score=299.24  Aligned_cols=250  Identities=28%  Similarity=0.465  Sum_probs=213.0

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|..++.||+|.||.|-+++.+.+|+.+|+|++++.    .........|-.+++..     .||.+..+..+|+..+++
T Consensus       169 dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~-----~HPFLt~LKYsFQt~drl  243 (516)
T KOG0690|consen  169 DFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC-----RHPFLTSLKYSFQTQDRL  243 (516)
T ss_pred             hhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhc-----cCcHHHHhhhhhccCceE
Confidence            456779999999999999999999999999999742    23334445577777765     778899999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ ||.|.-.+++..  .+++..++.+-.+|+.||.|||+.+|+.||+|.+|.|+                    
T Consensus       244 CFVMeyanGGeLf~HLsrer--~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL--------------------  301 (516)
T KOG0690|consen  244 CFVMEYANGGELFFHLSRER--VFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL--------------------  301 (516)
T ss_pred             EEEEEEccCceEeeehhhhh--cccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee--------------------
Confidence            9999999 999988887754  69999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccC---CCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                             ++++.+||+|||+++..-   ....+.+|||.|+|||++....|+.++|.|.+||++|||++|+.||+..+..
T Consensus       302 -------DkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~  374 (516)
T KOG0690|consen  302 -------DKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE  374 (516)
T ss_pred             -------ccCCceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh
Confidence                   788889999999987433   3336689999999999999999999999999999999999999999987766


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      ..+..|.-..-.+|                                                 ...+++++.|+..+|.+
T Consensus       375 kLFeLIl~ed~kFP-------------------------------------------------r~ls~eAktLLsGLL~k  405 (516)
T KOG0690|consen  375 KLFELILMEDLKFP-------------------------------------------------RTLSPEAKTLLSGLLKK  405 (516)
T ss_pred             HHHHHHHhhhccCC-------------------------------------------------ccCCHHHHHHHHHHhhc
Confidence            66554433222222                                                 24678999999999999


Q ss_pred             CCCCCc-----CHHHHhcCCCCCCCC
Q 017021          356 DPTDRL-----TAREALRHPFFTRDH  376 (379)
Q Consensus       356 dP~~Rp-----ta~e~l~hp~f~~~~  376 (379)
                      ||.+|.     .|.|+.+|+||+..+
T Consensus       406 dP~kRLGgGpdDakEi~~h~FF~~v~  431 (516)
T KOG0690|consen  406 DPKKRLGGGPDDAKEIMRHRFFASVD  431 (516)
T ss_pred             ChHhhcCCCchhHHHHHhhhhhccCC
Confidence            999998     599999999998764

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=2.3e-40  Score=303.67  Aligned_cols=277  Identities=31%  Similarity=0.503  Sum_probs=209.8

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccch---hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.++||+|+||.||+|.++.+++.||+|++.....   ....+..|+.++..+     .|++++++++++..++..|
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   76 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL-----RHENLVNLIEVFRRKKRLY   76 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhc-----CCcchhhHHHhcccCCeEE
Confidence            47788999999999999999999999999999863221   234566788888887     6799999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +|+||+ +++|..+.....  .+++..+..++.|++.||.|||+.|++|||++|+||++                     
T Consensus        77 lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~---------------------  133 (286)
T cd07846          77 LVFEFVDHTVLDDLEKYPN--GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILV---------------------  133 (286)
T ss_pred             EEEecCCccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---------------------
Confidence            999999 777776655443  48999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                            +.++.++|+|||.+.......   ....++..|+|||.+.+. .++.++||||||+++|+|++|++||......
T Consensus       134 ------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~  207 (286)
T cd07846         134 ------SQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI  207 (286)
T ss_pred             ------CCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH
Confidence                  455667888888765432221   224578899999998753 4678999999999999999999999887777


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+....+.+++...+......  ....  ...+...              ............+..+.+++.+||+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~--------------~~~~~~~~~~~~~~~~~~li~~~l~~  269 (286)
T cd07846         208 DQLYHIIKCLGNLIPRHQEIFQKNP--LFAG--MRLPEVK--------------EIEPLEKRFPKLSGLVLDLAKQCLRI  269 (286)
T ss_pred             HHHHHHHHHhCCCchhhHHHhccch--Hhhc--ccccccc--------------CcchHHHhCCCcCHHHHHHHHHHhcC
Confidence            7666666666655433222111000  0000  0000000              00011122345678899999999999


Q ss_pred             CCCCCcCHHHHhcCCCC
Q 017021          356 DPTDRLTAREALRHPFF  372 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f  372 (379)
                      ||++||+++++++||||
T Consensus       270 ~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         270 DPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             CcccchhHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=3.8e-40  Score=301.55  Aligned_cols=251  Identities=26%  Similarity=0.431  Sum_probs=190.6

Q ss_pred             ccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeC
Q 017021           50 KMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEK  125 (379)
Q Consensus        50 ~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~  125 (379)
                      .||+|+||.||++.+..+++.+|+|.+....    ........|...+..+..  .+|++++.+++.+..++..++||||
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~lv~e~   78 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST--GDCPFIVCMTYAFHTPDKLCFILDL   78 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhh--CCCCcEeEEEEEEecCCeEEEEEec
Confidence            4899999999999999999999999986432    112223334433333321  3678999999999999999999999


Q ss_pred             C-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccccc
Q 017021          126 L-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR  204 (379)
Q Consensus       126 ~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (379)
                      + +++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||+++                         
T Consensus        79 ~~~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~-------------------------  131 (279)
T cd05633          79 MNGGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLD-------------------------  131 (279)
T ss_pred             CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEEC-------------------------
Confidence            9 899999887654  689999999999999999999999999999999999994                         


Q ss_pred             CCCCCCeEEeecCcccccCCC-CCcccccCCccchhhhh-CCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHH
Q 017021          205 MPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME  282 (379)
Q Consensus       205 ~~~~~~~~l~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~  282 (379)
                        .++.++|+|||.+...... .....||..|+|||... +..++.++|+||+||++|+|++|..||........ ..+.
T Consensus       132 --~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~  208 (279)
T cd05633         132 --EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEID  208 (279)
T ss_pred             --CCCCEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHH
Confidence              4456777777766533222 12346899999999986 45688999999999999999999999975322110 0111


Q ss_pred             HHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCc-
Q 017021          283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL-  361 (379)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-  361 (379)
                      +.....+                                             ....+..+.++.++|++||+.||++|| 
T Consensus       209 ~~~~~~~---------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~  243 (279)
T cd05633         209 RMTLTVN---------------------------------------------VELPDSFSPELKSLLEGLLQRDVSKRLG  243 (279)
T ss_pred             HHhhcCC---------------------------------------------cCCccccCHHHHHHHHHHhcCCHHHhcC
Confidence            1000000                                             001123567899999999999999999 


Q ss_pred             ----CHHHHhcCCCCCCCCc
Q 017021          362 ----TAREALRHPFFTRDHL  377 (379)
Q Consensus       362 ----ta~e~l~hp~f~~~~~  377 (379)
                          |++++++||||++.+.
T Consensus       244 ~~~~~~~~~~~h~~~~~~~~  263 (279)
T cd05633         244 CLGRGAQEVKEHVFFKGIDW  263 (279)
T ss_pred             CCCCCHHHHHhCccccCCCH
Confidence                6999999999998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=1.1e-40  Score=301.36  Aligned_cols=249  Identities=24%  Similarity=0.389  Sum_probs=202.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.++||.|+||.||+|.+..+++.||+|++....    .....+..|++++.++     +|+|++.+++.+..+...
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   75 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-----NHPFLVNLWYSFQDEENM   75 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-----CCCChHHHHHhhcCCCeE
Confidence            4788899999999999999999999999999997432    2345667788888877     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      ++|+||+ +++|.+.+....  .+++..+..++.||+.||.|||+.|++|+||+|+||++                    
T Consensus        76 ~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~--------------------  133 (258)
T cd05578          76 YLVVDLLLGGDLRYHLSQKV--KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL--------------------  133 (258)
T ss_pred             EEEEeCCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE--------------------
Confidence            9999999 999999998763  68999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCC--CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                             +.++.++|+|||.+......  .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+...
T Consensus       134 -------~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~  206 (258)
T cd05578         134 -------DEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI  206 (258)
T ss_pred             -------cCCCCEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH
Confidence                   45556778888777654333  233467889999999988889999999999999999999999998655321


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ............+                                              ......+..+.++|++||+.|
T Consensus       207 ~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~i~~~l~~~  240 (258)
T cd05578         207 RDQIRAKQETADV----------------------------------------------LYPATWSTEAIDAINKLLERD  240 (258)
T ss_pred             HHHHHHHhccccc----------------------------------------------cCcccCcHHHHHHHHHHccCC
Confidence            1111111000000                                              011234578999999999999


Q ss_pred             CCCCcCH--HHHhcCCCC
Q 017021          357 PTDRLTA--REALRHPFF  372 (379)
Q Consensus       357 P~~Rpta--~e~l~hp~f  372 (379)
                      |.+||++  +|+++||||
T Consensus       241 p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         241 PQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             hhHcCCccHHHHhcCCCC
Confidence            9999999  999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=2.8e-40  Score=302.01  Aligned_cols=251  Identities=25%  Similarity=0.420  Sum_probs=198.5

Q ss_pred             cccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC
Q 017021           51 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  126 (379)
Q Consensus        51 Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~  126 (379)
                      ||+|+||+||+|.+..+|+.||+|++....    .....+..|+.++..+     .|++++.+++.++..+..|+||||+
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-----SSRFIVSLAYAFETKDDLCLVMTLM   75 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC-----CCCCEeeeeeEEecCCeEEEEEecC
Confidence            699999999999999999999999986421    2234446688888887     6799999999999999999999999


Q ss_pred             -CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccC
Q 017021          127 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  205 (379)
Q Consensus       127 -~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (379)
                       +++|.+++.......+++..+..++.|++.||.|||+.|++||||+|+||++                           
T Consensus        76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~---------------------------  128 (277)
T cd05577          76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL---------------------------  128 (277)
T ss_pred             CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---------------------------
Confidence             8999999977654568999999999999999999999999999999999999                           


Q ss_pred             CCCCCeEEeecCcccccCCC--CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHH
Q 017021          206 PKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER  283 (379)
Q Consensus       206 ~~~~~~~l~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~  283 (379)
                      +.++.++|+|||.+......  .....++..|+|||.+.+..++.++|+|||||++|+|++|+.||...........+.+
T Consensus       129 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  208 (277)
T cd05577         129 DDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR  208 (277)
T ss_pred             CCCCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh
Confidence            44556777777766543221  1234577889999999888889999999999999999999999976443111111111


Q ss_pred             HcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCc--
Q 017021          284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL--  361 (379)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp--  361 (379)
                      .....                                             .....+..++.+.++|.+||+.||++||  
T Consensus       209 ~~~~~---------------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~  243 (277)
T cd05577         209 RTLEM---------------------------------------------AVEYPDKFSPEAKDLCEALLQKDPEKRLGC  243 (277)
T ss_pred             ccccc---------------------------------------------cccCCccCCHHHHHHHHHHccCChhHccCC
Confidence            00000                                             0001123567899999999999999999  


Q ss_pred             ---CHHHHhcCCCCCCCCcC
Q 017021          362 ---TAREALRHPFFTRDHLR  378 (379)
Q Consensus       362 ---ta~e~l~hp~f~~~~~~  378 (379)
                         ++.++++||||++-+.+
T Consensus       244 ~~~~~~~ll~h~~~~~~~~~  263 (277)
T cd05577         244 RGGSADEVREHPLFKDLNWR  263 (277)
T ss_pred             CcccHHHHHhChhhhcCChh
Confidence               99999999999887664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.2e-40  Score=338.61  Aligned_cols=269  Identities=24%  Similarity=0.420  Sum_probs=205.5

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee--cc
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--RN  117 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~--~~  117 (379)
                      -.|+++++||+|+||+||+|+++.++..||+|++...   ......+..|+.++..+     .|++|+.++++|..  ..
T Consensus        13 ~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L-----~HPNIVrl~d~f~de~~~   87 (1021)
T PTZ00266         13 NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMREL-----KHKNIVRYIDRFLNKANQ   87 (1021)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHc-----CCCCcCeEEEEEEecCCC
Confidence            3688999999999999999999999999999998742   23345677899999988     77999999998854  46


Q ss_pred             eEEEEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHc-------CCcccCCCCCcEEEecccccccC
Q 017021          118 HICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDL-------CMIHTDLKPENVLLVSSEYIKVP  187 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-------~iiH~dlkp~Nili~~~~~~~~~  187 (379)
                      .+|+||||+ +++|.+++...  ....+++..++.++.||+.||.|||+.       +|+||||||+|||+...... +.
T Consensus        88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~-lg  166 (1021)
T PTZ00266         88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH-IG  166 (1021)
T ss_pred             EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc-cc
Confidence            799999999 89999998753  123689999999999999999999984       49999999999999643210 00


Q ss_pred             CCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhC--CCCCCccchHhHHHHHHHHH
Q 017021          188 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELC  263 (379)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~~l~  263 (379)
                      +....         ....+....++|+|||++.......  ....||+.|+|||++.+  ..++.++|||||||++|+|+
T Consensus       167 ~i~~~---------~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELL  237 (1021)
T PTZ00266        167 KITAQ---------ANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELC  237 (1021)
T ss_pred             ccccc---------ccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHH
Confidence            00000         0011344569999999987544332  34578999999999864  34789999999999999999


Q ss_pred             hCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchh
Q 017021          264 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  343 (379)
Q Consensus       264 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (379)
                      +|..||...+..............+|                                                ....+.
T Consensus       238 TGk~PF~~~~~~~qli~~lk~~p~lp------------------------------------------------i~~~S~  269 (1021)
T PTZ00266        238 SGKTPFHKANNFSQLISELKRGPDLP------------------------------------------------IKGKSK  269 (1021)
T ss_pred             HCCCCCCcCCcHHHHHHHHhcCCCCC------------------------------------------------cCCCCH
Confidence            99999976554332221111100000                                                012467


Q ss_pred             HHHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          344 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       344 ~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      ++.+||..||+.+|.+||++.|+|.|||++.
T Consensus       270 eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~  300 (1021)
T PTZ00266        270 ELNILIKNLLNLSAKERPSALQCLGYQIIKN  300 (1021)
T ss_pred             HHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence            8999999999999999999999999999974

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=3.9e-40  Score=297.03  Aligned_cols=250  Identities=25%  Similarity=0.371  Sum_probs=203.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.+.||+|++|.||+|.+..+++.+|+|.+...   ......+..|+.+++++     .|++++.+++.+..++..+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~   75 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLL-----SHPNIIEYYENFLEDKALM   75 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhC-----CCCchhheeeeEecCCEEE
Confidence            478889999999999999999999999999998643   22345566788888887     6789999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|.+++.......+++..+..++.+++.||.|||++|++||||+|+||+++.                   
T Consensus        76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~-------------------  136 (256)
T cd08220          76 IVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK-------------------  136 (256)
T ss_pred             EEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-------------------
Confidence            999999 889999998765456899999999999999999999999999999999999942                   


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                             .+..++|+|||.+.......  ....|+..|+|||.+.+..++.++|+||||+++|+|++|+.||...+....
T Consensus       137 -------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~  209 (256)
T cd08220         137 -------HKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL  209 (256)
T ss_pred             -------CCCEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH
Confidence                   23457888888776443322  234678899999999888889999999999999999999999976554333


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+......                      .                          ..+..+..+.+++.+||+.||
T Consensus       210 ~~~~~~~~~~----------------------~--------------------------~~~~~~~~l~~li~~~l~~~p  241 (256)
T cd08220         210 VLKIMSGTFA----------------------P--------------------------ISDRYSPDLRQLILSMLNLDP  241 (256)
T ss_pred             HHHHHhcCCC----------------------C--------------------------CCCCcCHHHHHHHHHHccCCh
Confidence            2222111000                      0                          012356789999999999999


Q ss_pred             CCCcCHHHHhcCCCC
Q 017021          358 TDRLTAREALRHPFF  372 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f  372 (379)
                      ++|||+.|+++||||
T Consensus       242 ~~Rpt~~~ll~~p~~  256 (256)
T cd08220         242 SKRPQLSQIMAQPIC  256 (256)
T ss_pred             hhCCCHHHHhhCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=3.8e-40  Score=299.26  Aligned_cols=253  Identities=25%  Similarity=0.459  Sum_probs=200.3

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-------hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      .|++.+.||+|++|.||++.+..+++.||+|++....       .....+..|+..++.+     .|++++++++.+.++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~   75 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-----NHPHIIRMLGATCED   75 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-----CCCceehhhceeccC
Confidence            3778899999999999999999999999999986322       1235667788888887     779999999999999


Q ss_pred             ceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          117 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       117 ~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      ++.++|+||+ +++|.+++....  .+++..+..++.|++.||+|||+.|++|+||+|+||+++.+              
T Consensus        76 ~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~--------------  139 (268)
T cd06630          76 SHFNLFVEWMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDST--------------  139 (268)
T ss_pred             CeEEEEEeccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--------------
Confidence            9999999999 899999997754  68899999999999999999999999999999999999432              


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCC-------CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                                  +..++|+|||.+......       .....|+..|+|||.+.+..++.++|+|||||++|+|++|..|
T Consensus       140 ------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p  207 (268)
T cd06630         140 ------------GQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPP  207 (268)
T ss_pred             ------------CCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCC
Confidence                        234777888776543322       1224578899999999888889999999999999999999999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |...........+.+....                  ....                          ...+..+..+.++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~------------------~~~~--------------------------~~~~~~~~~~~~~  243 (268)
T cd06630         208 WNAEKHSNHLALIFKIASA------------------TTAP--------------------------SIPEHLSPGLRDV  243 (268)
T ss_pred             CCCCCCcchHHHHHHHhcc------------------CCCC--------------------------CCchhhCHHHHHH
Confidence            9654322211111111000                  0000                          0112356789999


Q ss_pred             HhhccccCCCCCcCHHHHhcCCCCC
Q 017021          349 LQGLLRYDPTDRLTAREALRHPFFT  373 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~hp~f~  373 (379)
                      +.+||+.||++|||+.++++||||.
T Consensus       244 i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         244 TLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHHHcCCCcccCcCHHHHhcCcccC
Confidence            9999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=2.6e-40  Score=300.35  Aligned_cols=252  Identities=23%  Similarity=0.361  Sum_probs=196.5

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ...|++.+.||+|+||.||+|++..+++.||+|++.... .....+..|+.++.++     .|++++.+++.+..+...+
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~-----~h~~ii~~~~~~~~~~~~~   82 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKEC-----KHCNIVAYFGSYLSREKLW   82 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhc-----CCCCeeeeeEEEEeCCEEE
Confidence            346899999999999999999999999999999987432 2234456788888777     7799999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++|||++|+||+++                    
T Consensus        83 iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~--------------------  140 (267)
T cd06646          83 ICMEYCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT--------------------  140 (267)
T ss_pred             EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC--------------------
Confidence            999999 889999987654  689999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhh---CCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                             .++.++|+|||.+......   .....|+..|+|||.+.   ...++.++|+|||||++|+|++|..||....
T Consensus       141 -------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~  213 (267)
T cd06646         141 -------DNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLH  213 (267)
T ss_pred             -------CCCCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccc
Confidence                   4455777777776543221   12346788999999884   3447789999999999999999999986433


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+....                       ...+.                .     .....++..+.++|++||
T Consensus       214 ~~~~~~~~~~~~-----------------------~~~~~----------------~-----~~~~~~~~~~~~li~~~l  249 (267)
T cd06646         214 PMRALFLMSKSN-----------------------FQPPK----------------L-----KDKTKWSSTFHNFVKISL  249 (267)
T ss_pred             hhhhheeeecCC-----------------------CCCCC----------------C-----ccccccCHHHHHHHHHHh
Confidence            222111000000                       00000                0     001135678999999999


Q ss_pred             ccCCCCCcCHHHHhcCCC
Q 017021          354 RYDPTDRLTAREALRHPF  371 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~  371 (379)
                      +.||++|||++++++|+|
T Consensus       250 ~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         250 TKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             hCChhhCcCHHHHhcCCC
Confidence            999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.9e-40  Score=310.76  Aligned_cols=279  Identities=28%  Similarity=0.493  Sum_probs=218.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc---
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN---  117 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~---  117 (379)
                      .|++.+.||.|++|.||+|.+..+++.||+|++...   ......+..|+.+++.+     .|++++.+.+++....   
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHL-----RHENIIGLLDILRPPSPED   75 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhc-----CCcchhhhhhhhcccCccc
Confidence            478889999999999999999999999999998743   22345667788888888     6799999999988765   


Q ss_pred             --eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          118 --HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       118 --~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                        ..|++|||++++|.+++....  .+++..+..++.||+.||++||+.|++||||||+||+++                
T Consensus        76 ~~~~~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~----------------  137 (330)
T cd07834          76 FNDVYIVTELMETDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN----------------  137 (330)
T ss_pred             ccceEEEecchhhhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc----------------
Confidence              799999999878999987654  689999999999999999999999999999999999994                


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                                 .++.++|+|||.+.......      ....++..|+|||.+.+. .++.++|+||||+++|+|++|+.|
T Consensus       138 -----------~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~p  206 (330)
T cd07834         138 -----------SNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPL  206 (330)
T ss_pred             -----------CCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCC
Confidence                       44566677776665433221      234578899999999877 788999999999999999999999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhh-hhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVD-RHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      |.+.+..+....+....+.+++..+.... .....+.....                   ..............+..+.+
T Consensus       207 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~  267 (330)
T cd07834         207 FPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLP-------------------KKPKKPLSKLFPGASPEAID  267 (330)
T ss_pred             cCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcc-------------------cCCcchhHHhcccCCHHHHH
Confidence            99988888887787777777765544211 11111111100                   00001111122346788999


Q ss_pred             HHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          348 LLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +|++||+.||++|||++++++||||++.
T Consensus       268 li~~~l~~~P~~Rpt~~~ll~~~~~~~~  295 (330)
T cd07834         268 LLEKMLVFDPKKRITADEALAHPYLAQL  295 (330)
T ss_pred             HHHHHccCChhhCCCHHHHHhCccHHhh
Confidence            9999999999999999999999999764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=5.4e-40  Score=300.97  Aligned_cols=276  Identities=29%  Similarity=0.469  Sum_probs=212.3

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec--ceE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--NHI  119 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~--~~~  119 (379)
                      |++.++||+|++|.||+|.+..+++.+|+|++...   ......+..|+.++..+     .|++++.+++.+...  +..
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~   75 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKL-----RHPNIVRLKEIVTSKGKGSI   75 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhc-----cCCCeeeheeeEecCCCCcE
Confidence            67789999999999999999999999999999754   23345566788888888     679999999999888  899


Q ss_pred             EEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       120 ~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      ++|+||++++|.+++.... ..+++..+..++.||+.||+|||+.|++|+||+|+||+++                    
T Consensus        76 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~--------------------  134 (287)
T cd07840          76 YMVFEYMDHDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILIN--------------------  134 (287)
T ss_pred             EEEeccccccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEc--------------------
Confidence            9999999779998887653 3689999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                             .++.++|+|||.+.......    ....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...+.
T Consensus       135 -------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~  207 (287)
T cd07840         135 -------NDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE  207 (287)
T ss_pred             -------CCCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence                   44556777777665433322    22356778999997764 4578999999999999999999999998877


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhc-cchhHHHHHHhhcc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD-HSAGDLTHLLQGLL  353 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L  353 (379)
                      ......+.+..+.++...|..+.......  .              ..   .............. .++..+.+++++||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------------~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  268 (287)
T cd07840         208 LEQLEKIFELCGSPTDENWPGVSKLPWFE--N--------------LK---PKKPYKRRLREFFKHLIDPSALDLLDKLL  268 (287)
T ss_pred             HHHHHHHHHHhCCCchhhccccccchhhh--h--------------cc---ccccchhHHHHHhcccCCHHHHHHHHHHc
Confidence            77777777766666555444332220000  0              00   00000011111112 24789999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCC
Q 017021          354 RYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f  372 (379)
                      +.||.+||++.++++||||
T Consensus       269 ~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         269 TLDPKKRISADQALQHEYF  287 (287)
T ss_pred             CCChhhCcCHHHHhhCcCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=6.9e-40  Score=300.39  Aligned_cols=237  Identities=16%  Similarity=0.162  Sum_probs=190.9

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchh----hHhHHHHHHHHHHHHhcCCCCCeeEEecceeee----cceEE
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY----REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----RNHIC  120 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~----~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~----~~~~~  120 (379)
                      ..||+|++|.||+|.+  +|+.||+|.++.....    ...+.+|+.++.++     .|+|++++++++.+    ....+
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~nIv~~~g~~~~~~~~~~~~~   98 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-----DSNNILKIYGFIIDIVDDLPRLS   98 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhc-----CCCCEEEEeeeEEecccCCCceE
Confidence            6789999999999976  6889999999754332    24556899999988     77899999998876    45789


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      +||||+ +++|.+++....  .+++.....++.+++.||.|||+ .+++||||||+||++                    
T Consensus        99 lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill--------------------  156 (283)
T PHA02988         99 LILEYCTRGYLREVLDKEK--DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV--------------------  156 (283)
T ss_pred             EEEEeCCCCcHHHHHhhCC--CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE--------------------
Confidence            999999 899999998754  68899999999999999999998 599999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC--CCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                             +.++.++|+|||.+...........||..|+|||++.+  ..++.++|||||||++|+|++|+.||...+..+
T Consensus       157 -------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~  229 (283)
T PHA02988        157 -------TENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE  229 (283)
T ss_pred             -------CCCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH
Confidence                   55566788888877654433334568899999999976  678999999999999999999999998766554


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+......++                     .                          ....+..+.++|.+||+.|
T Consensus       230 ~~~~i~~~~~~~~---------------------~--------------------------~~~~~~~l~~li~~cl~~d  262 (283)
T PHA02988        230 IYDLIINKNNSLK---------------------L--------------------------PLDCPLEIKCIVEACTSHD  262 (283)
T ss_pred             HHHHHHhcCCCCC---------------------C--------------------------CCcCcHHHHHHHHHHhcCC
Confidence            4433322111110                     0                          1135678999999999999


Q ss_pred             CCCCcCHHHHhc
Q 017021          357 PTDRLTAREALR  368 (379)
Q Consensus       357 P~~Rpta~e~l~  368 (379)
                      |++|||++|+++
T Consensus       263 p~~Rps~~ell~  274 (283)
T PHA02988        263 SIKRPNIKEILY  274 (283)
T ss_pred             cccCcCHHHHHH
Confidence            999999999984

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-41  Score=285.15  Aligned_cols=258  Identities=22%  Similarity=0.270  Sum_probs=205.9

Q ss_pred             eeeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           35 ITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        35 ~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      ...+.+++.+|+|.+.||+|||+-||+++...+++.||+|++.... .....+++|++...++     +++|++++.+..
T Consensus        13 ~~tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf-----~s~~vl~l~dh~   87 (302)
T KOG2345|consen   13 RGTVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKF-----NSPNVLRLVDHQ   87 (302)
T ss_pred             CCcEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhh-----CCcchHHHHHHH
Confidence            4457788999999999999999999999999999999999998654 5677888999999988     779999888776


Q ss_pred             eec-----ceEEEEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecccc
Q 017021          114 DYR-----NHICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEY  183 (379)
Q Consensus       114 ~~~-----~~~~lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~--iiH~dlkp~Nili~~~~~  183 (379)
                      ..+     ...|++++|. .|+|.+.+...  .+..+++.+++.|+.+|+.||.+||+..  ++||||||.||++.    
T Consensus        88 l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls----  163 (302)
T KOG2345|consen   88 LREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS----  163 (302)
T ss_pred             HHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec----
Confidence            432     3599999999 99999998753  2335899999999999999999999998  99999999999994    


Q ss_pred             cccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCC------------cccccCCccchhhhhC---CCCCC
Q 017021          184 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN------------YIVSTRHYRAPEVILG---LGWTY  248 (379)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~------------~~~gt~~y~aPE~~~~---~~~~~  248 (379)
                                             ..+.++|.|||.+....-.-.            .-.-|..|.|||.+.-   .-.+.
T Consensus       164 -----------------------~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~e  220 (302)
T KOG2345|consen  164 -----------------------DSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITE  220 (302)
T ss_pred             -----------------------CCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCccccc
Confidence                                   445667777776653322211            1123788999999864   34789


Q ss_pred             ccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccch
Q 017021          249 PCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP  328 (379)
Q Consensus       249 ~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (379)
                      ++|||||||++|.|+.|..||...-         +.-            .++.-.+.++.+.+|+..             
T Consensus       221 rtDIWSLGCtLYa~mf~~sPfe~~~---------~~G------------gSlaLAv~n~q~s~P~~~-------------  266 (302)
T KOG2345|consen  221 RTDIWSLGCTLYAMMFGESPFERIY---------QQG------------GSLALAVQNAQISIPNSS-------------  266 (302)
T ss_pred             ccchhhhhHHHHHHHHcCCcchHHh---------hcC------------CeEEEeeeccccccCCCC-------------
Confidence            9999999999999999999996311         000            112234566677777632             


Q ss_pred             hhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          329 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                                 .++..+.++|..||+.||.+||++.+++.+
T Consensus       267 -----------~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  267 -----------RYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             -----------CccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence                       377889999999999999999999999864

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=9.3e-41  Score=328.68  Aligned_cols=286  Identities=23%  Similarity=0.302  Sum_probs=196.4

Q ss_pred             hhhhhhhccccccceeEEEEEecCCC-ceEEE------------------EEeeccchhhHhHHHHHHHHHHHHhcCCCC
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERK-EMVAI------------------KIVRGIKKYREAAMIEIEVLQQLAKHDKGG  103 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~-~~vAi------------------K~~~~~~~~~~~~~~e~~~l~~l~~~~~~~  103 (379)
                      ..|++.++||+|+||+||+|..+... ...+.                  |.+.........+.+|+.++.++     .|
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l-----~H  222 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRL-----NH  222 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhC-----CC
Confidence            46899999999999999998765332 22222                  22222223344566788888888     78


Q ss_pred             CeeEEecceeeecceEEEEEeCCCCCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEec
Q 017021          104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN---YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  180 (379)
Q Consensus       104 ~~i~~~~~~~~~~~~~~lv~e~~~~sL~~~l~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~  180 (379)
                      +||+++++++...+..|+++++++++|.+++....   ........+..++.||+.||.|||+.||+||||||+|||+  
T Consensus       223 pnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl--  300 (501)
T PHA03210        223 ENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL--  300 (501)
T ss_pred             CCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE--
Confidence            99999999999999999999999888888875432   1123456788899999999999999999999999999999  


Q ss_pred             ccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHH
Q 017021          181 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVG  256 (379)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG  256 (379)
                                               +.++.++|+|||++.......    ....||..|+|||++.+..++.++||||||
T Consensus       301 -------------------------~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  355 (501)
T PHA03210        301 -------------------------NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCG  355 (501)
T ss_pred             -------------------------CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHH
Confidence                                     455668888888886543322    234689999999999998999999999999


Q ss_pred             HHHHHHHhCCCC-CCCC--chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHH
Q 017021          257 CILVELCTGEAL-FQTH--ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL  333 (379)
Q Consensus       257 ~il~~l~~g~~p-f~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (379)
                      |++|+|++|..+ +...  ........+....+....++ +.....+..++....+...  .   .         .....
T Consensus       356 vil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~i~~~~~~~~--~---~---------~~~~~  420 (501)
T PHA03210        356 LILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEF-PDPPCKLFDYIDSAEIDHA--G---H---------SVPPL  420 (501)
T ss_pred             HHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhc-CCcHHHHHHHhhhhhcccC--c---c---------chhhH
Confidence            999999998754 4322  22222333333222222111 0000011111111100000  0   0         00001


Q ss_pred             HHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       334 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      ..  ....+.++.++|.+||++||.+||||.|+|+||||.....
T Consensus       421 ~~--~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~  462 (501)
T PHA03210        421 IR--NLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEE  462 (501)
T ss_pred             HH--hcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCc
Confidence            10  1124567889999999999999999999999999987653

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=9.8e-40  Score=294.62  Aligned_cols=249  Identities=28%  Similarity=0.441  Sum_probs=203.5

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.+.||.|+||.||.+++..+++.+|+|.+...   ......+.+|+.+++++     +|++++++++++.+.+..+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~~   75 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLL-----QHPNIIAYYNHFMDDNTLL   75 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhC-----CCCCeeEEEeEEecCCeEE
Confidence            478889999999999999999999999999998632   33445667888888887     7799999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      ++|||+ +++|.+++.......+++..+..++.|++.||.|||+.|++||||+|+||+++                    
T Consensus        76 ~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~--------------------  135 (256)
T cd08221          76 IEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT--------------------  135 (256)
T ss_pred             EEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe--------------------
Confidence            999999 89999999876444689999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                             .++.++|+|||.+.......   ....|++.|.|||.+.+..++.++|+||||+++|+|++|..||...+..+
T Consensus       136 -------~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~  208 (256)
T cd08221         136 -------KAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN  208 (256)
T ss_pred             -------CCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH
Confidence                   44456777777665332222   33468899999999988888999999999999999999999997755544


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+..  +..+.                                              .....+.++.++|.+||..|
T Consensus       209 ~~~~~~~--~~~~~----------------------------------------------~~~~~~~~~~~~i~~~l~~~  240 (256)
T cd08221         209 LVVKIVQ--GNYTP----------------------------------------------VVSVYSSELISLVHSLLQQD  240 (256)
T ss_pred             HHHHHHc--CCCCC----------------------------------------------CccccCHHHHHHHHHHcccC
Confidence            4333221  11110                                              00235678999999999999


Q ss_pred             CCCCcCHHHHhcCCCC
Q 017021          357 PTDRLTAREALRHPFF  372 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f  372 (379)
                      |++||++.++++|||+
T Consensus       241 p~~R~s~~~ll~~~~l  256 (256)
T cd08221         241 PEKRPTADEVLDQPLL  256 (256)
T ss_pred             cccCCCHHHHhhCcCC
Confidence            9999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=5.2e-40  Score=300.85  Aligned_cols=257  Identities=23%  Similarity=0.427  Sum_probs=196.8

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .|++.+.||+|+||.||+|.++.+|+.||+|+++...  ........|...+.+.    .+|+|++++++++..++.+|+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~----~~~~~iv~~~~~~~~~~~~~l   77 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRS----VDCPYTVTFYGALFREGDVWI   77 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHH----cCCCCeeeeeEEEecCCcEEE
Confidence            4778899999999999999999999999999987432  2233444455543332    377999999999999999999


Q ss_pred             EEeCCCCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          122 VFEKLGSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      +|||+.++|.+++...  ....+++..+..++.|++.||.|||+. +++||||||+||++                    
T Consensus        78 v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~--------------------  137 (283)
T cd06617          78 CMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI--------------------  137 (283)
T ss_pred             EhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE--------------------
Confidence            9999988998888652  223689999999999999999999997 99999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhC----CCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG----LGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~----~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                             +.++.++|+|||.+.......  ....|+..|+|||.+.+    ..++.++|+|||||++|+|++|+.||...
T Consensus       138 -------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~  210 (283)
T cd06617         138 -------NRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSW  210 (283)
T ss_pred             -------CCCCCEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcc
Confidence                   455567777877765432221  22457889999998864    45689999999999999999999999642


Q ss_pred             c-hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          273 E-NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       273 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      . ..+.......  +..+                    ..+                         .+.++.++.++|.+
T Consensus       211 ~~~~~~~~~~~~--~~~~--------------------~~~-------------------------~~~~~~~l~~li~~  243 (283)
T cd06617         211 KTPFQQLKQVVE--EPSP--------------------QLP-------------------------AEKFSPEFQDFVNK  243 (283)
T ss_pred             ccCHHHHHHHHh--cCCC--------------------CCC-------------------------ccccCHHHHHHHHH
Confidence            2 2221111111  0000                    000                         01256789999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCCCcC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRDHLR  378 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~~~~  378 (379)
                      ||..||++||+++|+++||||.....+
T Consensus       244 ~l~~~p~~Rp~~~~il~~~~~~~~~~~  270 (283)
T cd06617         244 CLKKNYKERPNYPELLQHPFFELHLSK  270 (283)
T ss_pred             HccCChhhCcCHHHHhcCchhhhcccc
Confidence            999999999999999999999987644

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=100.00  E-value=1.2e-41  Score=313.14  Aligned_cols=305  Identities=30%  Similarity=0.566  Sum_probs=243.8

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCC-CCeeEEecceeeecce
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKG-GNRCVQIRNWFDYRNH  118 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~-~~~i~~~~~~~~~~~~  118 (379)
                      .-.-.|.|..-.|+|-|++|..|.+...|+.||||++.+++.....-+.|+++|.++...+.. ..+|++++..|...+|
T Consensus       429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH  508 (752)
T KOG0670|consen  429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH  508 (752)
T ss_pred             hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence            344568888899999999999999999999999999999888888889999999999776643 3579999999999999


Q ss_pred             EEEEEeCCCCCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKLGSSLYDFLRKNN-YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~~~sL~~~l~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      +|+|+|....+|.+++.+.+ +-.|...++..++.|+..||..|-.+||+|.||||+|||++                  
T Consensus       509 LClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN------------------  570 (752)
T KOG0670|consen  509 LCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN------------------  570 (752)
T ss_pred             eEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec------------------
Confidence            99999999999999998854 23588999999999999999999999999999999999996                  


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCCCc-ccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                              .+...+||||||.|.....+..+ +..+..|.|||++.+.+|+.+-|+||+||+||||.||+..|.+.+...
T Consensus       571 --------E~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~  642 (752)
T KOG0670|consen  571 --------ESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQ  642 (752)
T ss_pred             --------cCcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHH
Confidence                    35677999999999876666543 456778999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCC---------------CCCCCCCchhhhhhhccchhhHHHHHHhhccc
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL---------------DWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  341 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (379)
                      .+...+.+-|++|..++.+-+=.-..+..+-.+               .++.-..+.+-...++..+....    -....
T Consensus       643 MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~d----eq~~~  718 (752)
T KOG0670|consen  643 MLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPD----EQPKI  718 (752)
T ss_pred             HHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCc----hhHHH
Confidence            999999999999998876633211111111000               01111111111111221111100    01124


Q ss_pred             hhHHHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       342 ~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      ...+++|+.+||..||++|.|..|+|+||||+.
T Consensus       719 ~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  719 VQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             HHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence            567999999999999999999999999999985

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=1.1e-39  Score=305.93  Aligned_cols=281  Identities=27%  Similarity=0.453  Sum_probs=212.8

Q ss_pred             hhhhhhccccccceeEEEEEecCC--CceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee---
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRER--KEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY---  115 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~--~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~---  115 (379)
                      .|++.+.||+|+||.||++.+..+  +..||+|++...   ......+..|+.++.++    .+|++++++++....   
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l----~~h~~iv~~~~~~~~~~~   76 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHF----RGHKNITCLYDMDIVFPG   76 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHh----cCCCChheeeeeeeeccc
Confidence            377889999999999999999888  899999998642   12234566788888776    257889998876432   


Q ss_pred             -cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 -RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 -~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                       ....++++++++++|.+.+....  .+++..+..++.||+.||.|||+.|++||||||+||+++.+             
T Consensus        77 ~~~~~~~~~e~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~-------------  141 (332)
T cd07857          77 NFNELYLYEELMEADLHQIIRSGQ--PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNAD-------------  141 (332)
T ss_pred             cCCcEEEEEecccCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCC-------------
Confidence             35688999999889999987644  68999999999999999999999999999999999999544             


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCC-------CCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~  266 (379)
                                    +.++|+|||.+......       .....||..|+|||.+.+ ..++.++|+||+||++|+|++|+
T Consensus       142 --------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~  207 (332)
T cd07857         142 --------------CELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRK  207 (332)
T ss_pred             --------------CCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence                          45566666655432211       122468899999998765 56889999999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||...+..+....+....+.++...+..+...............+.                  ..........+..+.
T Consensus       208 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~  269 (332)
T cd07857         208 PVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPK------------------KPFESIFPNANPLAL  269 (332)
T ss_pred             cCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCC------------------cchHhhCCCCCHHHH
Confidence            99998888888888888888887766555433221111110000000                  000111233567899


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +++.+||+.||.+|||+.|++.||||.+-
T Consensus       270 ~li~~~l~~~P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         270 DLLEKLLAFDPTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             HHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence            99999999999999999999999999743

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=1.2e-39  Score=305.04  Aligned_cols=281  Identities=27%  Similarity=0.478  Sum_probs=220.0

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee-cc
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-RN  117 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~-~~  117 (379)
                      .-.|++.+.||.|+||.||+|.++.+++.||+|++...   ......+..|+.++..+     .|+|++++.+++.. ..
T Consensus         9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~   83 (328)
T cd07856           9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL-----RHENIISLSDIFISPLE   83 (328)
T ss_pred             ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhc-----CCCCeeeEeeeEecCCC
Confidence            34588899999999999999999999999999987532   22345566788888888     67999999998865 56


Q ss_pred             eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          118 HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       118 ~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      ..++++||++++|.+++...   .++...+..++.|++.||.|||+.|++||||+|+||++                   
T Consensus        84 ~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili-------------------  141 (328)
T cd07856          84 DIYFVTELLGTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILI-------------------  141 (328)
T ss_pred             cEEEEeehhccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeE-------------------
Confidence            78999999988999888653   47888899999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                              +..+.++|+|||.+...........++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.......
T Consensus       142 --------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~  213 (328)
T cd07856         142 --------NENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN  213 (328)
T ss_pred             --------CCCCCEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                    44556788888877655444444567889999998765 568899999999999999999999998877777


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhh-hhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      ....+.+..+.+|+++...+.... ..+........                +   ..........+..+.++|++||+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~---~~~~~~~~~~~~~~~~li~~~l~~  274 (328)
T cd07856         214 QFSIITDLLGTPPDDVINTICSENTLRFVQSLPKRE----------------P---VPFSEKFKNADPSAIDLLEKMLVF  274 (328)
T ss_pred             HHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccC----------------C---CcHHHHcCCCCHHHHHHHHHHcCC
Confidence            777788888888887766532211 11111000000                0   000011234567899999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ||++|||+++++.||||...+
T Consensus       275 ~P~~R~t~~ell~~~~~~~~~  295 (328)
T cd07856         275 DPQKRISAAEALAHPYLAPYH  295 (328)
T ss_pred             ChhhCCCHHHHhcCCcccccc
Confidence            999999999999999997654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=6.2e-40  Score=297.44  Aligned_cols=254  Identities=24%  Similarity=0.379  Sum_probs=199.8

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .|++.+.||.|++|+||+|.+..++..+|+|++....  .....+..|+..+..+     .|++++.+++.+......++
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~i   76 (267)
T cd06610           2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQC-----NHPNVVKYYTSFVVGDELWL   76 (267)
T ss_pred             cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhc-----CCCCEEEEEEEEeeCCEEEE
Confidence            5788999999999999999999899999999986432  2345667788877777     67899999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          122 VFEKL-GSSLYDFLRKNNY-RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      ++|++ +++|.+++..... ..+++..+..++.|++.||.+||+.|++||||+|+||+++                    
T Consensus        77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~--------------------  136 (267)
T cd06610          77 VMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG--------------------  136 (267)
T ss_pred             EEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc--------------------
Confidence            99999 8999999976432 3589999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC-------CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                             .++.++|+|||.+.......       ....|+..|+|||.+... .++.++|+|||||++|+|++|+.||..
T Consensus       137 -------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~  209 (267)
T cd06610         137 -------EDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSK  209 (267)
T ss_pred             -------CCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccc
Confidence                   44556777777654322221       223688899999998776 688999999999999999999999976


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .+.........+.   .+..                   .+.                     .......+..+.+++.+
T Consensus       210 ~~~~~~~~~~~~~---~~~~-------------------~~~---------------------~~~~~~~~~~~~~li~~  246 (267)
T cd06610         210 YPPMKVLMLTLQN---DPPS-------------------LET---------------------GADYKKYSKSFRKMISL  246 (267)
T ss_pred             cChhhhHHHHhcC---CCCC-------------------cCC---------------------ccccccccHHHHHHHHH
Confidence            5443322221111   0000                   000                     00012356789999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      ||+.||++|||+.|+++||||
T Consensus       247 ~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         247 CLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HcCCChhhCcCHHHHhhCCCC
Confidence            999999999999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=8.7e-40  Score=299.89  Aligned_cols=260  Identities=23%  Similarity=0.383  Sum_probs=199.5

Q ss_pred             eeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee-
Q 017021           36 TYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD-  114 (379)
Q Consensus        36 ~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~-  114 (379)
                      ........+|++.+.||+|+||.||+|.++.+++.+|+|+++........+..|..++..+.    .|+|++++++.+. 
T Consensus        11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~----~h~~i~~~~~~~~~   86 (286)
T cd06638          11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALS----DHPNVVKFYGMYYK   86 (286)
T ss_pred             ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHh----cCCCeeeeeeeeee
Confidence            34445667889999999999999999999999999999998754444455667888887773    4789999998763 


Q ss_pred             ----ecceEEEEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccC
Q 017021          115 ----YRNHICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  187 (379)
Q Consensus       115 ----~~~~~~lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~  187 (379)
                          .+...++||||+ +++|.+++...  ....+++..+..++.|++.||.|||+.+++||||||+||++.        
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~--------  158 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT--------  158 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC--------
Confidence                456799999999 99999987642  223588899999999999999999999999999999999994        


Q ss_pred             CCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhC-----CCCCCccchHhHHHHH
Q 017021          188 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCIL  259 (379)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlG~il  259 (379)
                                         .++.++|+|||.+......   .....|+..|+|||++..     ..++.++|||||||++
T Consensus       159 -------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~  219 (286)
T cd06638         159 -------------------TEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITA  219 (286)
T ss_pred             -------------------CCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHH
Confidence                               4455777777776543221   123468899999998753     3478899999999999


Q ss_pred             HHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhc
Q 017021          260 VELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD  339 (379)
Q Consensus       260 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (379)
                      |+|++|+.||...............  ..+.                    .                        ....
T Consensus       220 ~el~~g~~p~~~~~~~~~~~~~~~~--~~~~--------------------~------------------------~~~~  253 (286)
T cd06638         220 IELGDGDPPLADLHPMRALFKIPRN--PPPT--------------------L------------------------HQPE  253 (286)
T ss_pred             HHHhcCCCCCCCCchhHHHhhcccc--CCCc--------------------c------------------------cCCC
Confidence            9999999999765432221111000  0000                    0                        0011


Q ss_pred             cchhHHHHHHhhccccCCCCCcCHHHHhcCCCC
Q 017021          340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       340 ~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      .++..+.++|.+||+.||++|||+.|+++|+||
T Consensus       254 ~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         254 LWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             CcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            245679999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=1.1e-39  Score=300.25  Aligned_cols=255  Identities=25%  Similarity=0.407  Sum_probs=198.3

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec-----
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR-----  116 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~-----  116 (379)
                      ...|.+.+.||+|+||.||+|.++.+++.+|+|++............|+.++..+    ..|+|++++++.+...     
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l----~~h~ni~~~~~~~~~~~~~~~   96 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSL----PNHPNVVKFYGMFYKADKLVG   96 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHh----cCCCCeEEEEEEEEeccccCC
Confidence            4568888999999999999999999999999999975444455666788777776    2578999999988643     


Q ss_pred             ceEEEEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          117 NHICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       117 ~~~~lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      ...|+||||+ +++|.+++...  ....+++..+..++.|++.||.|||+.|++||||||+||++               
T Consensus        97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili---------------  161 (291)
T cd06639          97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL---------------  161 (291)
T ss_pred             CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---------------
Confidence            4689999999 88999988642  22468999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCC-----CCCCccchHhHHHHHHHHHhC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL-----GWTYPCDIWSVGCILVELCTG  265 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwSlG~il~~l~~g  265 (379)
                                  +.++.++|+|||.+......   .....|+..|+|||.+...     .++.++|+|||||++|+|++|
T Consensus       162 ------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g  229 (291)
T cd06639         162 ------------TTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDG  229 (291)
T ss_pred             ------------cCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhC
Confidence                        44556788888876543321   2334678899999997543     267899999999999999999


Q ss_pred             CCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          266 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       266 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                      +.||......+....+.+  +..+.                    ..                        ..+..+..+
T Consensus       230 ~~p~~~~~~~~~~~~~~~--~~~~~--------------------~~------------------------~~~~~~~~l  263 (291)
T cd06639         230 DPPLFDMHPVKTLFKIPR--NPPPT--------------------LL------------------------HPEKWCRSF  263 (291)
T ss_pred             CCCCCCCcHHHHHHHHhc--CCCCC--------------------CC------------------------cccccCHHH
Confidence            999976544332221111  11000                    00                        011245679


Q ss_pred             HHHHhhccccCCCCCcCHHHHhcCCCCC
Q 017021          346 THLLQGLLRYDPTDRLTAREALRHPFFT  373 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rpta~e~l~hp~f~  373 (379)
                      .++|.+||+.||++||++.|+++||||+
T Consensus       264 ~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         264 NHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             HHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            9999999999999999999999999995

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-40  Score=324.58  Aligned_cols=258  Identities=27%  Similarity=0.371  Sum_probs=209.8

Q ss_pred             ceeeeeeeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeec-cchhhHhHHHHHHHHHHHHhcCCCCCeeEE
Q 017021           30 NMFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG-IKKYREAAMIEIEVLQQLAKHDKGGNRCVQ  108 (379)
Q Consensus        30 ~~~~~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~  108 (379)
                      ........+......++|.+.|.+|||+.||+|.+...|..||+|++-. ++.......+|+++++.+    .+|+|||.
T Consensus        24 ~~~~~G~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L----~gh~nIV~   99 (738)
T KOG1989|consen   24 ENYFVGQTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLL----SGHKNIVS   99 (738)
T ss_pred             ccCCCceEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHh----cCCCceee
Confidence            3445567888999999999999999999999999998889999999864 444556777899999998    57899999


Q ss_pred             ecceee-e------cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEE
Q 017021          109 IRNWFD-Y------RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLL  178 (379)
Q Consensus       109 ~~~~~~-~------~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--iiH~dlkp~Nili  178 (379)
                      +++... .      .-.+.|+|||| |++|-++|.......|++.+++.|+.+++.|+.+||.+.  |||||||-+|||+
T Consensus       100 yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLl  179 (738)
T KOG1989|consen  100 YIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLL  179 (738)
T ss_pred             EeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEE
Confidence            999432 1      13578999999 799999998765556999999999999999999999887  9999999999999


Q ss_pred             ecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC------------CcccccCCccchhhhh---C
Q 017021          179 VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------------NYIVSTRHYRAPEVIL---G  243 (379)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------------~~~~gt~~y~aPE~~~---~  243 (379)
                                                 ..++..||||||.+.-.-...            -...-|+.|+|||.+.   +
T Consensus       180 ---------------------------s~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg  232 (738)
T KOG1989|consen  180 ---------------------------SADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSG  232 (738)
T ss_pred             ---------------------------cCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcC
Confidence                                       555677778888764221111            1134689999999984   6


Q ss_pred             CCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhh
Q 017021          244 LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS  323 (379)
Q Consensus       244 ~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (379)
                      .+.+.|+|||+|||+||-|+....||......                           .+.++.+.+|..         
T Consensus       233 ~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l---------------------------aIlng~Y~~P~~---------  276 (738)
T KOG1989|consen  233 LPIGEKSDIWALGCLLYKLCYFTTPFEESGKL---------------------------AILNGNYSFPPF---------  276 (738)
T ss_pred             CCCcchhHHHHHHHHHHHHHHhCCCcCcCcce---------------------------eEEeccccCCCC---------
Confidence            67899999999999999999999999754322                           244555555542         


Q ss_pred             hccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          324 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                                     +.++..+.+||+.||+.||++||++.|++.+
T Consensus       277 ---------------p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  277 ---------------PNYSDRLKDLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             ---------------ccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence                           3578899999999999999999999999864

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-39  Score=297.84  Aligned_cols=277  Identities=29%  Similarity=0.482  Sum_probs=207.4

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce---
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH---  118 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~---  118 (379)
                      |++.+.||+|+||.||+|+++.+++.||+|.+....   ........|+.++.++..  ..|++++++++.+.....   
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~h~~i~~~~~~~~~~~~~~~   78 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLES--FEHPNIVRLLDVCHGPRTDRE   78 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhc--cCCCCcceEEEEEeeccCCCC
Confidence            677899999999999999999899999999997322   223345567777766632  257899999999987766   


Q ss_pred             --EEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          119 --ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       119 --~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                        .+++||++.++|.+++.......+++..+..++.|++.||.|||+.|++|+|++|+||++                  
T Consensus        79 ~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili------------------  140 (287)
T cd07838          79 LKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILV------------------  140 (287)
T ss_pred             ceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEE------------------
Confidence              999999997789998877544468999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                               +.++.++|+|||.+.......  ....++..|+|||.+.+..++.++|+|||||++|+|++|.+||...+.
T Consensus       141 ---------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~  211 (287)
T cd07838         141 ---------TSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE  211 (287)
T ss_pred             ---------ccCCCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh
Confidence                     445667788888775443322  233578889999999988899999999999999999999999988777


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .+....+.+..+......+........                 .....     .............+..+.++|.+||+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~-----~~~~~~~~~~~~~~~~~~~li~~~l~  269 (287)
T cd07838         212 ADQLDKIFDVIGLPSEEEWPRNVSLPR-----------------SSFPS-----YTPRSFKSFVPEICEEGLDLLKKMLT  269 (287)
T ss_pred             HHHHHHHHHHcCCCChHhcCCCcccch-----------------hhccc-----ccccchhhhhhhhhHHHHHHHHHHhc
Confidence            666655555443322211110000000                 00000     00000111122356788999999999


Q ss_pred             cCCCCCcCHHHHhcCCCC
Q 017021          355 YDPTDRLTAREALRHPFF  372 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f  372 (379)
                      .||++||+++|+++||||
T Consensus       270 ~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         270 FNPHKRISAFEALQHPYF  287 (287)
T ss_pred             cCCccCCCHHHHhcCcCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-39  Score=298.57  Aligned_cols=278  Identities=31%  Similarity=0.552  Sum_probs=212.9

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      |++.+.||+|++|+||+|.+..+++.||+|.+.....  ......+|+..+..+    ..|++++.+++.+..++..++|
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~----~~h~~i~~~~~~~~~~~~~~lv   76 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKL----NEHPNIVKLKEVFRENDELYFV   76 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhc----cCCCCchhHHHHhhcCCcEEEE
Confidence            6778999999999999999999999999999864322  122334566666666    2378999999999999999999


Q ss_pred             EeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          123 FEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       123 ~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      |||++++|.+.+.......+++..+..++.|++.||.|||+.|++|+||+|+||++                        
T Consensus        77 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i------------------------  132 (283)
T cd07830          77 FEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV------------------------  132 (283)
T ss_pred             EecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE------------------------
Confidence            99998899999877654468999999999999999999999999999999999999                        


Q ss_pred             ccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHH
Q 017021          203 KRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  279 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~  279 (379)
                         +.++.++|+|||.+.......  ....++..|+|||.+.+ ..++.++|+||||+++++|++|+.||...+..+...
T Consensus       133 ---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~  209 (283)
T cd07830         133 ---SGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLY  209 (283)
T ss_pred             ---cCCCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHH
Confidence               445667777777775443322  23457888999998744 457899999999999999999999998888777777


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                      .+....+.++...|..........    ...++...          .     ..........+..+.++|++||+.||++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----------~-----~~~~~~~~~~~~~~~~li~~cl~~~p~~  270 (283)
T cd07830         210 KICSVLGTPTKQDWPEGYKLASKL----GFRFPQFA----------P-----TSLHQLIPNASPEAIDLIKDMLRWDPKK  270 (283)
T ss_pred             HHHHhcCCCChhhhhhHhhhhccc----cccccccc----------c-----ccHHHHcccCCHHHHHHHHHhcccCccc
Confidence            777777777766554322211111    00111000          0     0001112233678999999999999999


Q ss_pred             CcCHHHHhcCCCC
Q 017021          360 RLTAREALRHPFF  372 (379)
Q Consensus       360 Rpta~e~l~hp~f  372 (379)
                      |||+.|++.||||
T Consensus       271 Rpt~~ei~~~~~~  283 (283)
T cd07830         271 RPTASQALQHPYF  283 (283)
T ss_pred             CCCHHHHhhCCCC
Confidence            9999999999998

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-39  Score=297.61  Aligned_cols=275  Identities=30%  Similarity=0.526  Sum_probs=217.1

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      |++.++||+|++|.||+|.+..+++.||+|++...   .........|+.+++.+     .|++++++++++.+.+..++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~~   75 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKEL-----KHPNIVKLLDVIHTERKLYL   75 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhc-----CCCCHHHHHhhhhcCCceEE
Confidence            56778999999999999999999999999999753   23345566788888877     67999999999999999999


Q ss_pred             EEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          122 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      |+|+++++|.+++.+.. ..+++..+..++.|++.||.+||+.|++||||+|+||++                       
T Consensus        76 v~e~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~-----------------------  131 (282)
T cd07829          76 VFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILI-----------------------  131 (282)
T ss_pred             EecCcCcCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEE-----------------------
Confidence            99999779999998763 258999999999999999999999999999999999999                       


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                          +.++.++|+|||.+.......   ....++..|+|||.+.+. .++.++|+|||||++|++++|..||.+.+..+.
T Consensus       132 ----~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~  207 (282)
T cd07829         132 ----NRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ  207 (282)
T ss_pred             ----cCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence                445667778887765433322   223456789999998766 788999999999999999999999998887777


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.+..+.+.+..|..+.....  .......+..                  ..........+..+.++|++||+.||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~i~~~l~~~P  267 (282)
T cd07829         208 LFKIFQILGTPTEESWPGVTKLPD--YKPTFPKFPP------------------KDLEKVLPRLDPEGIDLLSKMLQYNP  267 (282)
T ss_pred             HHHHHHHhCCCcHHHHHhhccccc--ccccccccCc------------------cchHHhcccccHHHHHHHHHhhccCc
Confidence            777888777777776665433220  0000000000                  00011122346789999999999999


Q ss_pred             CCCcCHHHHhcCCCC
Q 017021          358 TDRLTAREALRHPFF  372 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f  372 (379)
                      ++||++.+++.||||
T Consensus       268 ~~Rp~~~~~l~~p~~  282 (282)
T cd07829         268 AKRISAKEALKHPYF  282 (282)
T ss_pred             ccCCCHHHHhhCcCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1.2e-39  Score=302.16  Aligned_cols=269  Identities=25%  Similarity=0.373  Sum_probs=199.9

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|+||.||++.++.+++.||+|.+....    .....+..|+.++..+     .|++++++++.+..++..
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~   76 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA-----ENPFVVSMFCSFETKRHL   76 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-----CCCCeeeeEEEEecCCEE
Confidence            4778899999999999999999999999999987432    2234455677777766     679999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      ++||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||+++..+.+++.|||++.....+
T Consensus        77 ~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~  154 (305)
T cd05609          77 CMVMEYVEGGDCATLLKNIG--ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS  154 (305)
T ss_pred             EEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence            9999999 899999997754  6899999999999999999999999999999999999966665555555544221100


Q ss_pred             CcccccCCCCCCeEEeecCcccccC-CCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYER-PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                      ...          .+.+........ .......++..|+|||.+.+..++.++|+|||||++|++++|..||.+....+.
T Consensus       155 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~  224 (305)
T cd05609         155 LTT----------NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL  224 (305)
T ss_pred             ccc----------cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            000          000000000000 000123577889999999888899999999999999999999999986554443


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...........|..                                              ....+..+.++|.+||+.||
T Consensus       225 ~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~li~~~l~~~P  258 (305)
T cd05609         225 FGQVISDDIEWPEG----------------------------------------------DEALPADAQDLISRLLRQNP  258 (305)
T ss_pred             HHHHHhcccCCCCc----------------------------------------------cccCCHHHHHHHHHHhccCh
Confidence            33222211111100                                              01356778999999999999


Q ss_pred             CCCcC---HHHHhcCCCCCCC
Q 017021          358 TDRLT---AREALRHPFFTRD  375 (379)
Q Consensus       358 ~~Rpt---a~e~l~hp~f~~~  375 (379)
                      ++||+   +.++++||||...
T Consensus       259 ~~R~~~~~~~~ll~~~~~~~~  279 (305)
T cd05609         259 LERLGTGGAFEVKQHRFFLGL  279 (305)
T ss_pred             hhccCccCHHHHHhCccccCC
Confidence            99997   8999999999654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=9.2e-40  Score=295.92  Aligned_cols=244  Identities=27%  Similarity=0.457  Sum_probs=197.0

Q ss_pred             cccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC
Q 017021           51 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  126 (379)
Q Consensus        51 Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~  126 (379)
                      ||.|++|.||+|++..+++.||+|++....    .....+..|+.++..+     .|++++++.+.+.++...++++||+
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~   75 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-----NHPFIVKLYRTFKDKKYIYMLMEYC   75 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-----CCCCEeeeeeeEEcCCccEEEEecC
Confidence            699999999999999999999999986432    2345566788887777     7899999999999999999999999


Q ss_pred             -CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccC
Q 017021          127 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  205 (379)
Q Consensus       127 -~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (379)
                       +++|.+++.+..  .++...+..++.||+.||.|||+.|++|+||+|+||++                           
T Consensus        76 ~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv---------------------------  126 (262)
T cd05572          76 LGGELWTILRDRG--LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL---------------------------  126 (262)
T ss_pred             CCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---------------------------
Confidence             899999998754  58999999999999999999999999999999999999                           


Q ss_pred             CCCCCeEEeecCcccccCCC--CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc--hHHHHHHH
Q 017021          206 PKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE--NLEHLAMM  281 (379)
Q Consensus       206 ~~~~~~~l~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~--~~~~~~~~  281 (379)
                      +.++.++|+|||.+......  .....|+..|++||.+.+..++.++|+||||+++|+|++|..||....  ..+....+
T Consensus       127 ~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  206 (262)
T cd05572         127 DSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDI  206 (262)
T ss_pred             cCCCCEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHH
Confidence            44566788888877644332  223467889999999988889999999999999999999999997655  22222111


Q ss_pred             HHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCc
Q 017021          282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  361 (379)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  361 (379)
                      ....                     .....|                          ...+.++.++|.+||+.||++||
T Consensus       207 ~~~~---------------------~~~~~~--------------------------~~~~~~~~~~i~~~l~~~p~~R~  239 (262)
T cd05572         207 LKGN---------------------GKLEFP--------------------------NYIDKAAKDLIKQLLRRNPEERL  239 (262)
T ss_pred             hccC---------------------CCCCCC--------------------------cccCHHHHHHHHHHccCChhhCc
Confidence            1000                     000111                          12356899999999999999999


Q ss_pred             C-----HHHHhcCCCCCCC
Q 017021          362 T-----AREALRHPFFTRD  375 (379)
Q Consensus       362 t-----a~e~l~hp~f~~~  375 (379)
                      +     ++|+++||||++-
T Consensus       240 ~~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         240 GNLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             CCcccCHHHHhcChhhhCC
Confidence            9     9999999999864

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=4.1e-40  Score=303.29  Aligned_cols=253  Identities=26%  Similarity=0.418  Sum_probs=201.1

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ...|.....||+|+||.||++.+..++..||+|.+.... .....+..|+..+..+     .|+|++.+++.+..++..|
T Consensus        21 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~ii~~~~~~~~~~~~~   95 (292)
T cd06658          21 REYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDY-----HHENVVDMYNSYLVGDELW   95 (292)
T ss_pred             HHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhC-----CCCcHHHHHHheecCCeEE
Confidence            345666788999999999999999999999999986422 2344566788877776     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|.+++...   .+++..+..++.||+.||.|||+.|++||||||+||+++                    
T Consensus        96 lv~e~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~--------------------  152 (292)
T cd06658          96 VVMEFLEGGALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT--------------------  152 (292)
T ss_pred             EEEeCCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc--------------------
Confidence            999999 88999888553   488999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                             .++.++|+|||.+......   .....|+..|+|||.+.+..++.++|+||||+++|+|++|+.||...+..+
T Consensus       153 -------~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~  225 (292)
T cd06658         153 -------SDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ  225 (292)
T ss_pred             -------CCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                   4456777777766432211   123468889999999988889999999999999999999999998655544


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.....+...                                              .....+..+.+++.+||+.|
T Consensus       226 ~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~li~~~l~~~  259 (292)
T cd06658         226 AMRRIRDNLPPRVK----------------------------------------------DSHKVSSVLRGFLDLMLVRE  259 (292)
T ss_pred             HHHHHHhcCCCccc----------------------------------------------cccccCHHHHHHHHHHccCC
Confidence            33222221111000                                              00124567899999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~  375 (379)
                      |.+|||++|+++||||...
T Consensus       260 P~~Rpt~~~il~~~~~~~~  278 (292)
T cd06658         260 PSQRATAQELLQHPFLKLA  278 (292)
T ss_pred             hhHCcCHHHHhhChhhhcc
Confidence            9999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=8.6e-40  Score=307.85  Aligned_cols=279  Identities=25%  Similarity=0.416  Sum_probs=204.2

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec-----
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR-----  116 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~-----  116 (379)
                      ..|++.+.||.|+||.||+|.++.+++.||+|++.... .......+|+.++..+     .|++++++++.+...     
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l-----~h~~i~~~~~~~~~~~~~~~   79 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRL-----DHDNIVKVYEVLGPSGSDLT   79 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhc-----CCCcchhhHhhhcccccccc
Confidence            46888999999999999999999999999999986433 2334566788888888     678999988766543     


Q ss_pred             ---------ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccC
Q 017021          117 ---------NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  187 (379)
Q Consensus       117 ---------~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~  187 (379)
                               ...|+||||++++|.+++...   .+++..+..++.||+.||+|||+.|++||||||+||+++.       
T Consensus        80 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~-------  149 (342)
T cd07854          80 EDVGSLTELNSVYIVQEYMETDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT-------  149 (342)
T ss_pred             cccccccccceEEEEeecccccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC-------
Confidence                     368999999988998888653   4899999999999999999999999999999999999942       


Q ss_pred             CCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhC-CCCCCccchHhHHHHHH
Q 017021          188 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILV  260 (379)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~  260 (379)
                                         .+..++|+|||.+...+...      ....++..|+|||.+.+ ..++.++|||||||++|
T Consensus       150 -------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~  210 (342)
T cd07854         150 -------------------EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFA  210 (342)
T ss_pred             -------------------CCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHH
Confidence                               23456777777665432211      12356888999998754 55789999999999999


Q ss_pred             HHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc
Q 017021          261 ELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  340 (379)
Q Consensus       261 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (379)
                      +|++|..||...+..+....+..........................  ..                 ............
T Consensus       211 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----------------~~~~~~~~~~~~  271 (342)
T cd07854         211 EMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRND--GG-----------------EPRRPLRDLLPG  271 (342)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhc--cc-----------------ccCCCHHHHccC
Confidence            99999999988776665554444333222222221111111110000  00                 000001112234


Q ss_pred             chhHHHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       341 ~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      .+.++.+||++||+.||.+|||+.|+++||||+.
T Consensus       272 ~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~  305 (342)
T cd07854         272 VNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC  305 (342)
T ss_pred             CCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence            6678999999999999999999999999999973

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.7e-42  Score=288.73  Aligned_cols=288  Identities=27%  Similarity=0.477  Sum_probs=227.2

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEee---ccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee-
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~---~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~-  115 (379)
                      ...-.|.-..+||+|.||.||+|+.+.+|++||+|++-   ..+.......+|+.+++.+     .|+|++.+++.+.. 
T Consensus        14 ~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~l-----kHenv~nliEic~tk   88 (376)
T KOG0669|consen   14 DEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLL-----KHENVVNLIEICRTK   88 (376)
T ss_pred             ecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHh-----cchhHHHHHHHHhhc
Confidence            33445777789999999999999999999999999863   2355678889999999998     66888888877653 


Q ss_pred             -------cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCC
Q 017021          116 -------RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD  188 (379)
Q Consensus       116 -------~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~  188 (379)
                             ...+|+||++|..+|.-++.... -.++...+..++.+++.||.|+|...|+|||+||+|+||          
T Consensus        89 ~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~-vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI----------  157 (376)
T KOG0669|consen   89 ATPTNRDRATFYLVFDFCEHDLAGLLSNRK-VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI----------  157 (376)
T ss_pred             cCCcccccceeeeeHHHhhhhHHHHhcCcc-ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE----------
Confidence                   24599999999999999987653 358999999999999999999999999999999999999          


Q ss_pred             CccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCC-------cccccCCccchhhhhC-CCCCCccchHhHHHHHH
Q 017021          189 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-------YIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILV  260 (379)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~-------~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~  260 (379)
                                       ++++.++|+|||+++......+       ..+.|..|.+||.+.+ ..|+++.|||+.|||+.
T Consensus       158 -----------------t~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCima  220 (376)
T KOG0669|consen  158 -----------------TKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMA  220 (376)
T ss_pred             -----------------cCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHH
Confidence                             6777888888888864433321       1345889999999877 45899999999999999


Q ss_pred             HHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhh-hccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhc
Q 017021          261 ELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKY-VRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD  339 (379)
Q Consensus       261 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (379)
                      +|++|.+.+++.++......|....|....++|+.++...-.. ++..  +.+..  ....+...+         ..+  
T Consensus       221 eMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~e--Pl~~~--~~rkv~n~~---------kp~--  285 (376)
T KOG0669|consen  221 EMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELE--PLPKG--QKRKVKNRL---------KPY--  285 (376)
T ss_pred             HHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCC--CCCcc--hhhhhhhhc---------ccc--
Confidence            9999999999999999999999999999999999876543221 1111  01110  000010000         000  


Q ss_pred             cchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       340 ~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      .-.+++.||+.+||..||.+|++++|++.|.||+.+
T Consensus       286 ~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd  321 (376)
T KOG0669|consen  286 VKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD  321 (376)
T ss_pred             cCChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence            113579999999999999999999999999999865

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=9.1e-40  Score=297.61  Aligned_cols=252  Identities=27%  Similarity=0.405  Sum_probs=196.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccch-----------hhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-----------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-----------~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      .|.+.+.||.|++|.||+|.+..+++.||+|.++....           ....+..|+.++..+     .|+++++++++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~   76 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-----DHLNIVQYLGF   76 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-----CCCCcceEEEE
Confidence            57888999999999999999999999999999853211           112445677777777     67999999999


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                      +...+..++||||+ +++|.+++....  .++...+..++.|++.||.|||+.|++||||+|+||+++            
T Consensus        77 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~------------  142 (272)
T cd06629          77 ETTEEYLSIFLEYVPGGSIGSCLRTYG--RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVD------------  142 (272)
T ss_pred             eccCCceEEEEecCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEc------------
Confidence            99999999999999 999999997764  689999999999999999999999999999999999994            


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhhCCC--CCCccchHhHHHHHHHHHh
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLG--WTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlG~il~~l~~  264 (379)
                                     .++.++|+|||.+......     .....|+..|+|||.+....  ++.++|+||||+++|++++
T Consensus       143 ---------------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~  207 (272)
T cd06629         143 ---------------ADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFA  207 (272)
T ss_pred             ---------------CCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHh
Confidence                           4456777777766543221     12245788999999987654  7899999999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |..||...+..+....+.....                     ....+.                      ......+..
T Consensus       208 g~~p~~~~~~~~~~~~~~~~~~---------------------~~~~~~----------------------~~~~~~~~~  244 (272)
T cd06629         208 GRRPWSDEEAIAAMFKLGNKRS---------------------APPIPP----------------------DVSMNLSPV  244 (272)
T ss_pred             CCCCCcCcchHHHHHHhhcccc---------------------CCcCCc----------------------cccccCCHH
Confidence            9999975443322211110000                     000000                      011235678


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhcCCCC
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      +.++|.+||..||++|||++|+++||||
T Consensus       245 ~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         245 ALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             HHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            9999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=1.5e-39  Score=295.32  Aligned_cols=248  Identities=28%  Similarity=0.442  Sum_probs=192.9

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc------hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee--
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--  115 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~--  115 (379)
                      .|++.+.||+|+||.||+|.+..++..||+|++....      .....+..|+.+++.+     .|++++.+++++..  
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   77 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-----QHERIVQYYGCLRDRA   77 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-----CCCCeeeEEEEEEcCC
Confidence            5788899999999999999999999999999986321      2234556688888887     67999999998865  


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      +...++++||+ +++|.+++....  .++......++.|++.||.|||+.|++||||+|+||+++.              
T Consensus        78 ~~~~~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~--------------  141 (266)
T cd06651          78 EKTLTIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDS--------------  141 (266)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC--------------
Confidence            46789999999 889999997754  5889999999999999999999999999999999999944              


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCC------CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                                   +..++|+|||.+......      .....++..|+|||.+.+..++.++|+||+||++|+|++|+.|
T Consensus       142 -------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~p  208 (266)
T cd06651         142 -------------AGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPP  208 (266)
T ss_pred             -------------CCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCC
Confidence                         445666777665432211      1223578899999999888899999999999999999999999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |......+....+... ...|                                              ......+..+.++
T Consensus       209 f~~~~~~~~~~~~~~~-~~~~----------------------------------------------~~~~~~~~~~~~l  241 (266)
T cd06651         209 WAEYEAMAAIFKIATQ-PTNP----------------------------------------------QLPSHISEHARDF  241 (266)
T ss_pred             ccccchHHHHHHHhcC-CCCC----------------------------------------------CCchhcCHHHHHH
Confidence            9765433222111110 0000                                              0011245677888


Q ss_pred             HhhccccCCCCCcCHHHHhcCCCCC
Q 017021          349 LQGLLRYDPTDRLTAREALRHPFFT  373 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~hp~f~  373 (379)
                      + +||..||++||+++|+++||||+
T Consensus       242 i-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         242 L-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             H-HHhcCChhhCcCHHHHhcCcccc
Confidence            8 57778999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=1.4e-39  Score=301.86  Aligned_cols=292  Identities=25%  Similarity=0.397  Sum_probs=209.2

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee----
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----  115 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~----  115 (379)
                      ..|++.++||+|++|.||+|.++.+++.+|+|++....   .......+|++++..+     .|++++++++.+..    
T Consensus         8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   82 (311)
T cd07866           8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKL-----KHPNVVPLIDMAVERPDK   82 (311)
T ss_pred             ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhc-----CCCCccchhhheeccccc
Confidence            46888999999999999999999999999999986322   1223456788888887     67899999887743    


Q ss_pred             ----cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          116 ----RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       116 ----~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                          ...+++|+||+.+++...+.... ..+++..+..++.|++.||+|||+.|++|+||||+||+++.++.+++.|||+
T Consensus        83 ~~~~~~~~~lv~~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~  161 (311)
T cd07866          83 SKRKRGSVYMVTPYMDHDLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGL  161 (311)
T ss_pred             ccccCceEEEEEecCCcCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCcc
Confidence                33579999999888888876543 3699999999999999999999999999999999999997666666666655


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                      +...........    .        +.. ..........+++.|+|||.+.+. .++.++|||||||++|+|++|+.||.
T Consensus       162 ~~~~~~~~~~~~----~--------~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~  228 (311)
T cd07866         162 ARPYDGPPPNPK----G--------GGG-GGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQ  228 (311)
T ss_pred             chhccCCCcccc----c--------CCc-ccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCC
Confidence            532211110000    0        000 000001223568889999987653 57899999999999999999999999


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      +.+.......+....+.+++..+..+...............                   ..............+.++|+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~i~  289 (311)
T cd07866         229 GKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNY-------------------PRTLEERFGKLGPEGLDLLS  289 (311)
T ss_pred             CCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCC-------------------CccHHHHcccCChhHHHHHH
Confidence            88877777777776666655544432221111000000000                   00111122345578999999


Q ss_pred             hccccCCCCCcCHHHHhcCCCC
Q 017021          351 GLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      +||+.||++|||+.|++.||||
T Consensus       290 ~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         290 KLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             HHcccCcccCcCHHHHhcCCCC
Confidence            9999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=9.7e-40  Score=296.10  Aligned_cols=247  Identities=21%  Similarity=0.305  Sum_probs=197.6

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ...|.+.++||+|++|.||+|.++.+++.||+|++.........+..|+..+..+     .|++++++++++..++..++
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   79 (263)
T cd05052           5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-----KHPNLVQLLGVCTREPPFYI   79 (263)
T ss_pred             hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhC-----CCCChhheEEEEcCCCCcEE
Confidence            3456778999999999999999999999999999986554456677888888887     67899999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +|||+ +++|.+++.......+++..+..++.|++.||+|||+.|++||||||+||+++.                    
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~--------------------  139 (263)
T cd05052          80 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE--------------------  139 (263)
T ss_pred             EEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC--------------------
Confidence            99999 899999997755456899999999999999999999999999999999999954                    


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  275 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~  275 (379)
                             ++.++|+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.+....
T Consensus       140 -------~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~  212 (263)
T cd05052         140 -------NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS  212 (263)
T ss_pred             -------CCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence                   4456666666654332221    11123567999999988889999999999999999998 99999775544


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+......                      .                          .....+.++.++|.+||+.
T Consensus       213 ~~~~~~~~~~~~----------------------~--------------------------~~~~~~~~~~~li~~cl~~  244 (263)
T cd05052         213 QVYELLEKGYRM----------------------E--------------------------RPEGCPPKVYELMRACWQW  244 (263)
T ss_pred             HHHHHHHCCCCC----------------------C--------------------------CCCCCCHHHHHHHHHHccC
Confidence            433322211000                      0                          0123567899999999999


Q ss_pred             CCCCCcCHHHHhc
Q 017021          356 DPTDRLTAREALR  368 (379)
Q Consensus       356 dP~~Rpta~e~l~  368 (379)
                      ||++|||+.++++
T Consensus       245 ~p~~Rp~~~~l~~  257 (263)
T cd05052         245 NPSDRPSFAEIHQ  257 (263)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999975

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=4.3e-40  Score=300.69  Aligned_cols=250  Identities=30%  Similarity=0.431  Sum_probs=198.6

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ...|++.+.||+|+||.||+|.+..+++.||+|.+....  .....+..|+..+..+     .|++++++++.+..++..
T Consensus         3 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   77 (277)
T cd06642           3 EELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYITRYYGSYLKGTKL   77 (277)
T ss_pred             HHHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcC-----CCCccHhhhcccccCCce
Confidence            346888999999999999999999999999999987332  2334566788877776     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++...   .+++..+..++.|++.||.|||+.|++|+||+|+||++..                  
T Consensus        78 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~------------------  136 (277)
T cd06642          78 WIIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSE------------------  136 (277)
T ss_pred             EEEEEccCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeC------------------
Confidence            9999999 88999988653   4889999999999999999999999999999999999954                  


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                               ++.++|+|||.+.......   ....|+..|+|||.+.+..++.++|+|||||++|+|++|..||......
T Consensus       137 ---------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~  207 (277)
T cd06642         137 ---------QGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM  207 (277)
T ss_pred             ---------CCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh
Confidence                     4456677777665332221   2235788899999998888999999999999999999999998754332


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      .....+...  ..+                                              ......+..+.++|.+||+.
T Consensus       208 ~~~~~~~~~--~~~----------------------------------------------~~~~~~~~~~~~li~~~l~~  239 (277)
T cd06642         208 RVLFLIPKN--SPP----------------------------------------------TLEGQYSKPFKEFVEACLNK  239 (277)
T ss_pred             hHHhhhhcC--CCC----------------------------------------------CCCcccCHHHHHHHHHHccC
Confidence            222111000  000                                              00112456789999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~  374 (379)
                      +|++|||+.++++||||..
T Consensus       240 ~p~~Rp~~~~il~~~~~~~  258 (277)
T cd06642         240 DPRFRPTAKELLKHKFITR  258 (277)
T ss_pred             CcccCcCHHHHHHhHHHHH
Confidence            9999999999999999863

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2.4e-39  Score=296.90  Aligned_cols=265  Identities=24%  Similarity=0.357  Sum_probs=203.2

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ..-.|++.+.||+|+||+||++.+..+++.||+|++...  ......+..|++++..+     .|++++++++.+...+.
T Consensus         3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~   77 (284)
T cd06620           3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHEC-----RSPYIVSFYGAFLNENN   77 (284)
T ss_pred             cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHc-----CCCCcceEeeeEecCCE
Confidence            345789999999999999999999999999999998643  23345667788888877     77999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      .++||||+ +++|.+++...+  .+++..+..++.+++.||.|||+ .+++||||+|+||+++                 
T Consensus        78 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~-----------------  138 (284)
T cd06620          78 ICMCMEFMDCGSLDRIYKKGG--PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVN-----------------  138 (284)
T ss_pred             EEEEEecCCCCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEEC-----------------
Confidence            99999999 889999887754  68999999999999999999996 6899999999999994                 


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCC-CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERP-DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                                .++.++|+|||.+..... ......|+..|+|||.+.+..++.++|+|||||++|++++|..||......
T Consensus       139 ----------~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~  208 (284)
T cd06620         139 ----------SRGQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNID  208 (284)
T ss_pred             ----------CCCcEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchh
Confidence                      445677777776643221 123346889999999998888899999999999999999999999865432


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +...       ..+....    ......+.......+                         ....+.++.+|+.+||+.
T Consensus       209 ~~~~-------~~~~~~~----~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~l~~  252 (284)
T cd06620         209 DDGQ-------DDPMGIL----DLLQQIVQEPPPRLP-------------------------SSDFPEDLRDFVDACLLK  252 (284)
T ss_pred             hhhh-------hhhhHHH----HHHHHHhhccCCCCC-------------------------chhcCHHHHHHHHHHhcC
Confidence            1100       0000000    000000000000000                         011456789999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||++|||++|+++||||.+.
T Consensus       253 dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         253 DPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             CcccCcCHHHHhcCcccccc
Confidence            99999999999999999664

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=2.1e-39  Score=299.71  Aligned_cols=278  Identities=29%  Similarity=0.475  Sum_probs=209.9

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc--
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN--  117 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~--  117 (379)
                      ..|++.+.||+|++|.||+|.++.+++.||+|+++...   ........|+.++..+     .|+|++++++++.+..  
T Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l-----~h~~i~~~~~~~~~~~~~   81 (302)
T cd07864           7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQL-----NHRNIVNLKEIVTDKQDA   81 (302)
T ss_pred             hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhC-----CCCCeeeeeheecCcchh
Confidence            46788899999999999999999999999999997432   2234555688888877     6799999998887654  


Q ss_pred             --------eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCC
Q 017021          118 --------HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       118 --------~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                              ..++++||+++++.+.+.... ..+++..+..++.|++.||.|||+.|++||||+|+||+++          
T Consensus        82 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~----------  150 (302)
T cd07864          82 LDFKKDKGAFYLVFEYMDHDLMGLLESGL-VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN----------  150 (302)
T ss_pred             hhccccCCcEEEEEcccCccHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC----------
Confidence                    899999999778888877643 3589999999999999999999999999999999999994          


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHh
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~  264 (379)
                                       .++.++|+|||.+.......    ....++..|+|||.+.+ ..++.++|||||||++|+|++
T Consensus       151 -----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~  213 (302)
T cd07864         151 -----------------NKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFT  213 (302)
T ss_pred             -----------------CCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHh
Confidence                             44556677777665332221    11245778999998865 346899999999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |++||...+..+....+.+..+..+...++.+.............                   .............+..
T Consensus       214 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~  274 (302)
T cd07864         214 KKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKK-------------------QYRRRLREEFSFIPTP  274 (302)
T ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChhhccccccccccccccccc-------------------ccccchhhhcCCCCHH
Confidence            999999887777777777776666555544332211100000000                   0000111122235678


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhcCCCC
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      +.++|.+||+.||++|||+++++.||||
T Consensus       275 ~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         275 ALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             HHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence            9999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-39  Score=293.61  Aligned_cols=252  Identities=26%  Similarity=0.409  Sum_probs=200.8

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ..|++.+.||.|++|.||+|.+..+++.+|+|++.... .....+..|+.++..+     +|++++++++.+...+..|+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~~l   77 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKEC-----RHPNIVAYFGSYLRRDKLWI   77 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhC-----CCCChhceEEEEEeCCEEEE
Confidence            46788899999999999999999999999999987532 2345667788888887     78999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +|||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||+|+||+++                     
T Consensus        78 ~~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---------------------  135 (262)
T cd06613          78 VMEYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT---------------------  135 (262)
T ss_pred             EEeCCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC---------------------
Confidence            99999 889999987752 2689999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCC---CCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                            .++.++|+|||.+......   .....++..|+|||.+.+.   .++.++|+||||+++|+|++|..||...+.
T Consensus       136 ------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~  209 (262)
T cd06613         136 ------EDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP  209 (262)
T ss_pred             ------CCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence                  4556777777766543322   1234678889999998776   788999999999999999999999976554


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .+....+.......+.                                       .     ......+.++.+++++||.
T Consensus       210 ~~~~~~~~~~~~~~~~---------------------------------------~-----~~~~~~~~~~~~li~~~l~  245 (262)
T cd06613         210 MRALFLISKSNFPPPK---------------------------------------L-----KDKEKWSPVFHDFIKKCLT  245 (262)
T ss_pred             HHHHHHHHhccCCCcc---------------------------------------c-----cchhhhhHHHHHHHHHHcC
Confidence            4333222211000000                                       0     0011245678999999999


Q ss_pred             cCCCCCcCHHHHhcCCC
Q 017021          355 YDPTDRLTAREALRHPF  371 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~  371 (379)
                      .||..|||+.+++.|||
T Consensus       246 ~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         246 KDPKKRPTATKLLQHPF  262 (262)
T ss_pred             CChhhCCCHHHHhcCCC
Confidence            99999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=1e-39  Score=301.34  Aligned_cols=252  Identities=23%  Similarity=0.418  Sum_probs=201.3

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ..|.....||+|+||.||+|.+..+++.||+|.+... ......+..|+.++..+     .|++++++++.+..++..|+
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-----~hp~i~~~~~~~~~~~~~~i   95 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-----QHQNVVEMYKSYLVGEELWV   95 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhC-----CCCchhhhhhheeeCCeEEE
Confidence            3344557899999999999999999999999998632 22344566777777776     78999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      ++||+ +++|.+++...   .+++..+..++.|++.||.|||+.|++||||+|+||++                      
T Consensus        96 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill----------------------  150 (297)
T cd06659          96 LMEFLQGGALTDIVSQT---RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL----------------------  150 (297)
T ss_pred             EEecCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE----------------------
Confidence            99999 88999887653   48999999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                           +.++.++|+|||.+......   .....|+..|+|||.+.+..++.++|+|||||++|+|++|+.||......+.
T Consensus       151 -----~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~  225 (297)
T cd06659         151 -----TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA  225 (297)
T ss_pred             -----ccCCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                 45566788888876533222   2335688999999999888899999999999999999999999986555443


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.....+..                                              ......+..+.++|++||+.||
T Consensus       226 ~~~~~~~~~~~~----------------------------------------------~~~~~~~~~l~~~i~~~l~~~P  259 (297)
T cd06659         226 MKRLRDSPPPKL----------------------------------------------KNAHKISPVLRDFLERMLTREP  259 (297)
T ss_pred             HHHHhccCCCCc----------------------------------------------cccCCCCHHHHHHHHHHhcCCc
Confidence            332211100000                                              0011245678999999999999


Q ss_pred             CCCcCHHHHhcCCCCCCC
Q 017021          358 TDRLTAREALRHPFFTRD  375 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f~~~  375 (379)
                      ++||+++++++||||..-
T Consensus       260 ~~Rps~~~ll~~~~~~~~  277 (297)
T cd06659         260 QERATAQELLDHPFLLQT  277 (297)
T ss_pred             ccCcCHHHHhhChhhccC
Confidence            999999999999999865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=1.3e-39  Score=293.84  Aligned_cols=246  Identities=25%  Similarity=0.371  Sum_probs=198.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .|++.++||.|+||.||++.++.+++.+|+|.++..  .........|..++..+     .|+|++++++.+..++.+|+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   75 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKM-----KHPNIVAFKESFEADGHLYI   75 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhC-----CCCCcceEEEEEEECCEEEE
Confidence            377889999999999999999999999999998632  23345566777877777     77999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +|||+ +++|.+++.......+++..+..++.|++.||.+||+.|++|+||||+||+++                     
T Consensus        76 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~---------------------  134 (255)
T cd08219          76 VMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLT---------------------  134 (255)
T ss_pred             EEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEC---------------------
Confidence            99999 89999998765545689999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                            .++.++++|||.+.......   ....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+....
T Consensus       135 ------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~  208 (255)
T cd08219         135 ------QNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL  208 (255)
T ss_pred             ------CCCcEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH
Confidence                  45567777777765433221   234688899999999888899999999999999999999999986554333


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.+.....                                                .....+..+.++|.+||+.||
T Consensus       209 ~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~li~~~l~~~P  240 (255)
T cd08219         209 ILKVCQGSYKP------------------------------------------------LPSHYSYELRSLIKQMFKRNP  240 (255)
T ss_pred             HHHHhcCCCCC------------------------------------------------CCcccCHHHHHHHHHHHhCCc
Confidence            32222111000                                                011245678999999999999


Q ss_pred             CCCcCHHHHhcC
Q 017021          358 TDRLTAREALRH  369 (379)
Q Consensus       358 ~~Rpta~e~l~h  369 (379)
                      ++|||+.++++-
T Consensus       241 ~~Rp~~~~il~~  252 (255)
T cd08219         241 RSRPSATTILSR  252 (255)
T ss_pred             ccCCCHHHHhhc
Confidence            999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=7.8e-40  Score=296.69  Aligned_cols=256  Identities=26%  Similarity=0.437  Sum_probs=203.3

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .|++.+.||+|++|.||+|.++.+++.||+|++...  ......+..|++.++.+     .|++++.+++.+...+..++
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~l   76 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKC-----NSPYIVGFYGAFYNNGDISI   76 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHC-----CCCchhhhheeeecCCEEEE
Confidence            467889999999999999999999999999998743  23345567788888777     58999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      ++||+ +++|.+++.... ..+++..+..++.|++.||+|||+ .|++|+||+|+||++                     
T Consensus        77 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~---------------------  134 (265)
T cd06605          77 CMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILV---------------------  134 (265)
T ss_pred             EEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEE---------------------
Confidence            99999 799999998753 368999999999999999999999 999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC-CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch--HH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN--LE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~--~~  276 (379)
                            +.++.++|+|||.+....... ....++..|+|||.+.+..++.++|+||||+++|+|++|+.||.....  ..
T Consensus       135 ------~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~  208 (265)
T cd06605         135 ------NSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG  208 (265)
T ss_pred             ------CCCCCEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc
Confidence                  455668888888775432221 125678899999999888899999999999999999999999975421  11


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.......+                   ...+                         ....+..+.++|.+||..|
T Consensus       209 ~~~~~~~~~~~~~-------------------~~~~-------------------------~~~~~~~~~~li~~~l~~~  244 (265)
T cd06605         209 IFELLQYIVNEPP-------------------PRLP-------------------------SGKFSPDFQDFVNLCLIKD  244 (265)
T ss_pred             HHHHHHHHhcCCC-------------------CCCC-------------------------hhhcCHHHHHHHHHHcCCC
Confidence            1111111111100                   0000                         0015678999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~~  376 (379)
                      |++|||+.|++.||||++-+
T Consensus       245 p~~Rpt~~~ll~~~~~~~~~  264 (265)
T cd06605         245 PRERPSYKELLEHPFIKKYE  264 (265)
T ss_pred             chhCcCHHHHhhCchhhccc
Confidence            99999999999999998643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=2.3e-39  Score=292.20  Aligned_cols=248  Identities=29%  Similarity=0.449  Sum_probs=198.7

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc------hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      +|+..+.||+|++|.||+|.+..+++.||+|.+....      .....+..|+..+..+     .|++++++++++..+.
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~   75 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-----QHPNIVQYLGTEREED   75 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-----CCCCchheeeeEecCC
Confidence            3677899999999999999999899999999986432      2335566788887777     7799999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..++++||+ +++|.+++.+..  .+++..+..++.|++.||.|||+.|++|+||+|+||+++                 
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~-----------------  136 (258)
T cd06632          76 NLYIFLELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD-----------------  136 (258)
T ss_pred             eEEEEEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-----------------
Confidence            999999999 889999997754  588999999999999999999999999999999999994                 


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCC-CCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                .+..++|+|||.+.......  ....|+..|++||.+.... ++.++|+|||||++|+|++|+.||....
T Consensus       137 ----------~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~  206 (258)
T cd06632         137 ----------TNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE  206 (258)
T ss_pred             ----------CCCCEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc
Confidence                      45567777777665432222  3346788999999987766 8899999999999999999999997654


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+... ...+                                              ......+..+.+++++||
T Consensus       207 ~~~~~~~~~~~-~~~~----------------------------------------------~~~~~~~~~~~~li~~~l  239 (258)
T cd06632         207 GVAAVFKIGRS-KELP----------------------------------------------PIPDHLSDEAKDFILKCL  239 (258)
T ss_pred             HHHHHHHHHhc-ccCC----------------------------------------------CcCCCcCHHHHHHHHHHh
Confidence            33322221110 0000                                              011235678899999999


Q ss_pred             ccCCCCCcCHHHHhcCCCC
Q 017021          354 RYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f  372 (379)
                      +.||++||++.+++.|||+
T Consensus       240 ~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         240 QRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             hcCcccCcCHHHHhcCCCC
Confidence            9999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=3.1e-39  Score=295.38  Aligned_cols=250  Identities=26%  Similarity=0.413  Sum_probs=190.7

Q ss_pred             ccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeC
Q 017021           50 KMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEK  125 (379)
Q Consensus        50 ~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~  125 (379)
                      .||+|+||.||+|.+..+++.||+|++....    ........|...+..+..  .+|++++.+.+.+...+..++||||
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~v~e~   78 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST--GDCPFIVCMSYAFHTPDKLSFILDL   78 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHh--CCCCcEeeeeeeeecCCEEEEEEec
Confidence            4799999999999999999999999986421    112223334444333322  3678999999999999999999999


Q ss_pred             C-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccccc
Q 017021          126 L-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR  204 (379)
Q Consensus       126 ~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (379)
                      + |++|.+++....  .+++..+..++.|++.||.|||+.+++||||||+||+++                         
T Consensus        79 ~~g~~L~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~-------------------------  131 (278)
T cd05606          79 MNGGDLHYHLSQHG--VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-------------------------  131 (278)
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEEC-------------------------
Confidence            9 999999887654  689999999999999999999999999999999999994                         


Q ss_pred             CCCCCCeEEeecCcccccCC-CCCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHH
Q 017021          205 MPKSSAIKVIDFGSTTYERP-DQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME  282 (379)
Q Consensus       205 ~~~~~~~~l~Dfg~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~  282 (379)
                        .++.++|+|||.+..... ......|+..|+|||.+.+ ..++.++|+||+||++|+|++|+.||.............
T Consensus       132 --~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~  209 (278)
T cd05606         132 --EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR  209 (278)
T ss_pred             --CCCCEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH
Confidence              445677777776653322 1233468999999999874 468899999999999999999999997642211110000


Q ss_pred             HHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCc-
Q 017021          283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL-  361 (379)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-  361 (379)
                      .....                    ...                          .....+.++.+++.+||..||.+|| 
T Consensus       210 ~~~~~--------------------~~~--------------------------~~~~~s~~~~~li~~~l~~~p~~R~~  243 (278)
T cd05606         210 MTLTM--------------------AVE--------------------------LPDSFSPELRSLLEGLLQRDVNRRLG  243 (278)
T ss_pred             Hhhcc--------------------CCC--------------------------CCCcCCHHHHHHHHHHhhcCHHhccC
Confidence            00000                    000                          1123567899999999999999999 


Q ss_pred             ----CHHHHhcCCCCCCCC
Q 017021          362 ----TAREALRHPFFTRDH  376 (379)
Q Consensus       362 ----ta~e~l~hp~f~~~~  376 (379)
                          ++.++++||||++.+
T Consensus       244 ~~~~~~~~ll~~~~~~~~~  262 (278)
T cd05606         244 CLGRGAQEVKEHPFFRSLD  262 (278)
T ss_pred             CCCCCHHHHHhCccccCCC
Confidence                999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=1.8e-39  Score=295.21  Aligned_cols=247  Identities=25%  Similarity=0.381  Sum_probs=190.9

Q ss_pred             hhhhhcc--ccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           45 DKIHSKM--GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        45 y~i~~~L--g~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      |++.+.+  |+|+||.||++.++.+++.+|+|.+........    |......+    ..|++++++++.+..++..|+|
T Consensus        16 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----e~~~~~~~----~~h~~iv~~~~~~~~~~~~~iv   87 (267)
T PHA03390         16 CEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI----EPMVHQLM----KDNPNFIKLYYSVTTLKGHVLI   87 (267)
T ss_pred             hccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh----hHHHHHHh----hcCCCEEEEEEEEecCCeeEEE
Confidence            4444554  999999999999999999999999874322111    22222222    2578999999999999999999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      |||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++||||+|+||++..++                   
T Consensus        88 ~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~-------------------  146 (267)
T PHA03390         88 MDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK-------------------  146 (267)
T ss_pred             EEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC-------------------
Confidence            9999 899999998764  689999999999999999999999999999999999995322                   


Q ss_pred             cccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHH-HH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-AM  280 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~-~~  280 (379)
                             ..++|+|||.+...... ....++..|+|||.+.+..++.++|+||||+++|+|++|..||......+.. ..
T Consensus       147 -------~~~~l~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~  218 (267)
T PHA03390        147 -------DRIYLCDYGLCKIIGTP-SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLES  218 (267)
T ss_pred             -------CeEEEecCccceecCCC-ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHH
Confidence                   26788888877644322 2346788999999998888999999999999999999999999754332210 11


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      +.......                                              ....+..+..+.++|.+||+.||.+|
T Consensus       219 ~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R  252 (267)
T PHA03390        219 LLKRQQKK----------------------------------------------LPFIKNVSKNANDFVQSMLKYNINYR  252 (267)
T ss_pred             HHHhhccc----------------------------------------------CCcccccCHHHHHHHHHHhccChhhC
Confidence            10000000                                              00112467889999999999999999


Q ss_pred             cC-HHHHhcCCCCCC
Q 017021          361 LT-AREALRHPFFTR  374 (379)
Q Consensus       361 pt-a~e~l~hp~f~~  374 (379)
                      |+ ++|+|+||||+.
T Consensus       253 ~~~~~~~l~h~~~~~  267 (267)
T PHA03390        253 LTNYNEIIKHPFLKI  267 (267)
T ss_pred             CchHHHHhcCCcccC
Confidence            96 599999999973

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=2.6e-39  Score=300.12  Aligned_cols=253  Identities=25%  Similarity=0.367  Sum_probs=203.0

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ..|++.+.||+|+||.||+|.+..+++.||+|++....    .....+..|+.++..+     .|+|++++.+++...+.
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-----~h~niv~~~~~~~~~~~   89 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-----RHPNTIEYKGCYLREHT   89 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-----CCCCEEEEEEEEEeCCe
Confidence            45889999999999999999999999999999986322    2234566788888877     78999999999999999


Q ss_pred             EEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          119 ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       119 ~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      .|+|+||+.+++.+++.... ..+++..+..++.|++.||.|||+.|++||||+|+||++                    
T Consensus        90 ~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~--------------------  148 (307)
T cd06607          90 AWLVMEYCLGSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL--------------------  148 (307)
T ss_pred             EEEEHHhhCCCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE--------------------
Confidence            99999999888888886543 358999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhh---CCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                             +.++.++|+|||.+...... ....++..|+|||.+.   ...++.++||||||+++|+|++|..||...+..
T Consensus       149 -------~~~~~~kL~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~  220 (307)
T cd06607         149 -------TEPGTVKLADFGSASLVSPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM  220 (307)
T ss_pred             -------CCCCCEEEeecCcceecCCC-CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH
Confidence                   55567888888877644332 3346788999999874   345789999999999999999999999766544


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      .....+...  ..+.                    .+                         ...++..+.++|.+||+.
T Consensus       221 ~~~~~~~~~--~~~~--------------------~~-------------------------~~~~~~~~~~li~~~l~~  253 (307)
T cd06607         221 SALYHIAQN--DSPT--------------------LS-------------------------SNDWSDYFRNFVDSCLQK  253 (307)
T ss_pred             HHHHHHhcC--CCCC--------------------CC-------------------------chhhCHHHHHHHHHHhcC
Confidence            432222111  0000                    00                         012456799999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ||++||++.+++.||||....
T Consensus       254 ~p~~Rp~~~~il~~~~~~~~~  274 (307)
T cd06607         254 IPQDRPSSEELLKHRFVLRER  274 (307)
T ss_pred             ChhhCcCHHHHhcChhhcccC
Confidence            999999999999999997653

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=1.5e-39  Score=298.73  Aligned_cols=260  Identities=23%  Similarity=0.353  Sum_probs=198.7

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .|+..+.||+|+||.||++.+..+++.||+|++....  .....+..|+..+.++    ..|++++++++++..++..++
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~----~~~~~iv~~~~~~~~~~~~~~   80 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRS----SDCPYIVKFYGALFREGDCWI   80 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHh----cCCCCEeeeeeEEecCCcEEE
Confidence            5667799999999999999999999999999986432  2344556777777776    247899999999999999999


Q ss_pred             EEeCCCCCHHHHHH---hCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          122 VFEKLGSSLYDFLR---KNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       122 v~e~~~~sL~~~l~---~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      +|||++.++.++..   ......+++..+..++.|++.||+|||+ .+++||||||+||++                   
T Consensus        81 ~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~-------------------  141 (288)
T cd06616          81 CMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL-------------------  141 (288)
T ss_pred             EEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEE-------------------
Confidence            99999777666543   2223468999999999999999999997 499999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCC--CCcccccCCccchhhhhCC---CCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                              +..+.++|+|||.+......  .....|+..|+|||.+.+.   .++.++|||||||++|+|++|+.||...
T Consensus       142 --------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  213 (288)
T cd06616         142 --------DRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKW  213 (288)
T ss_pred             --------ccCCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhc
Confidence                    44556788888877543222  1234678899999998765   6889999999999999999999999754


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      .  +....+.+.....+..                   .+                      ......++.++.+||.+|
T Consensus       214 ~--~~~~~~~~~~~~~~~~-------------------~~----------------------~~~~~~~~~~l~~li~~~  250 (288)
T cd06616         214 N--SVFDQLTQVVKGDPPI-------------------LS----------------------NSEEREFSPSFVNFINLC  250 (288)
T ss_pred             c--hHHHHHhhhcCCCCCc-------------------CC----------------------CcCCCccCHHHHHHHHHH
Confidence            3  2222222222111100                   00                      000123567899999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          353 LRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      |+.||++|||++++++||||.....
T Consensus       251 l~~~p~~Rpt~~~i~~~~~~~~~~~  275 (288)
T cd06616         251 LIKDESKRPKYKELLEHPFIKDYEE  275 (288)
T ss_pred             ccCChhhCcCHHHHhcChhhhchhh
Confidence            9999999999999999999987554

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.1e-39  Score=296.27  Aligned_cols=247  Identities=20%  Similarity=0.261  Sum_probs=191.8

Q ss_pred             chhhhhhhhccccccceeEEEEEec---CCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      ....|++.+.||+|+||.||+|+++   ..+..||+|.++...  .....+..|+..+.++     .|+|++++++++..
T Consensus         3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~   77 (266)
T cd05064           3 DNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQF-----DHSNIVRLEGVITR   77 (266)
T ss_pred             chHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcC-----CCCCcCeEEEEEec
Confidence            4567889999999999999999865   456789999987542  2334566788877776     78999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      ++..++||||+ +++|.+++.... ..+++..++.++.|++.||+|||+.|++||||||+||+++.++            
T Consensus        78 ~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~------------  144 (266)
T cd05064          78 GNTMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDL------------  144 (266)
T ss_pred             CCCcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCC------------
Confidence            99999999999 889999987653 3689999999999999999999999999999999999995544            


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALF  269 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf  269 (379)
                                     .++++|||.+.......    ....++..|+|||.+.+..++.++|||||||++|++++ |..||
T Consensus       145 ---------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~  209 (266)
T cd05064         145 ---------------VCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPY  209 (266)
T ss_pred             ---------------cEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCc
Confidence                           45555555443221111    11234568999999988899999999999999999775 99999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      ...+..+....+.+....+                      .                          ...++..+.+++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~----------------------~--------------------------~~~~~~~~~~li  241 (266)
T cd05064         210 WDMSGQDVIKAVEDGFRLP----------------------A--------------------------PRNCPNLLHQLM  241 (266)
T ss_pred             CcCCHHHHHHHHHCCCCCC----------------------C--------------------------CCCCCHHHHHHH
Confidence            8765544433332211100                      0                          113556799999


Q ss_pred             hhccccCCCCCcCHHHHhc
Q 017021          350 QGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~  368 (379)
                      .+||+.||++|||++|+++
T Consensus       242 ~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         242 LDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HHHcCCCchhCCCHHHHHH
Confidence            9999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=2.1e-39  Score=292.37  Aligned_cols=250  Identities=26%  Similarity=0.384  Sum_probs=200.7

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|.+.+.||+|+||.||++.++.+|..+|+|.+...   ......+..|+.+++.+     .|++++++++.+......+
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~-----~h~~i~~~~~~~~~~~~~~   75 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKM-----KHPNIVTFFASFQENGRLF   75 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhC-----CCCChhhhhheeccCCeEE
Confidence            367889999999999999999999999999998643   12344566788888887     6789999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +++||+ +++|.+++.......+++..+..++.|++.||.|||+.+++|+|++|+||+++.+                  
T Consensus        76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~------------------  137 (257)
T cd08225          76 IVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKN------------------  137 (257)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCC------------------
Confidence            999999 8999999977554457999999999999999999999999999999999999532                  


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                              +..++|+|||.+.......   ....|+..|+|||.+.+..++.++|+||||+++|++++|..||...+..+
T Consensus       138 --------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~  209 (257)
T cd08225         138 --------GMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ  209 (257)
T ss_pred             --------CCeEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence                    2345777777765443322   22357889999999988888999999999999999999999997654433


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+..  +..+                                              ......+.++.++|.+||+.+
T Consensus       210 ~~~~~~~--~~~~----------------------------------------------~~~~~~~~~~~~~i~~~l~~~  241 (257)
T cd08225         210 LVLKICQ--GYFA----------------------------------------------PISPNFSRDLRSLISQLFKVS  241 (257)
T ss_pred             HHHHHhc--ccCC----------------------------------------------CCCCCCCHHHHHHHHHHhccC
Confidence            2221111  0000                                              001134568999999999999


Q ss_pred             CCCCcCHHHHhcCCCC
Q 017021          357 PTDRLTAREALRHPFF  372 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f  372 (379)
                      |++|||+.|+++||||
T Consensus       242 p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         242 PRDRPSITSILKRPFL  257 (257)
T ss_pred             hhhCcCHHHHhhCCCC
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=3.3e-39  Score=292.91  Aligned_cols=248  Identities=27%  Similarity=0.442  Sum_probs=193.0

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc------hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee--
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--  115 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~--  115 (379)
                      .|++.+.||+|+||.||++.+..++..||+|.+....      .....+..|+.++..+     .|++++.+++.+.+  
T Consensus         3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~   77 (265)
T cd06652           3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-----LHERIVQYYGCLRDPM   77 (265)
T ss_pred             cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-----CCCCeeeEEeEeccCC
Confidence            4778899999999999999999999999999985321      1234556688888887     77999999998865  


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      ...++++|||+ +++|.+++.+..  .+++..+..++.|++.||.|||+.|++|+||+|+||+++.+             
T Consensus        78 ~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~-------------  142 (265)
T cd06652          78 ERTLSIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSV-------------  142 (265)
T ss_pred             CceEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCC-------------
Confidence            35788999999 889999988754  58889999999999999999999999999999999999544             


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCC------CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERP------DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                                    +.++|+|||.+.....      ......|+..|+|||.+.+..++.++|+|||||++|+|++|+.|
T Consensus       143 --------------~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p  208 (265)
T cd06652         143 --------------GNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPP  208 (265)
T ss_pred             --------------CCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCC
Confidence                          4556666665543211      11224578899999999888899999999999999999999999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |...........+   ......                  .                          ......+..+.++
T Consensus       209 ~~~~~~~~~~~~~---~~~~~~------------------~--------------------------~~~~~~~~~~~~~  241 (265)
T cd06652         209 WAEFEAMAAIFKI---ATQPTN------------------P--------------------------VLPPHVSDHCRDF  241 (265)
T ss_pred             CCccchHHHHHHH---hcCCCC------------------C--------------------------CCchhhCHHHHHH
Confidence            9765433322211   111000                  0                          0011245678899


Q ss_pred             HhhccccCCCCCcCHHHHhcCCCCC
Q 017021          349 LQGLLRYDPTDRLTAREALRHPFFT  373 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~hp~f~  373 (379)
                      |++||. +|++||+++|+++|||+.
T Consensus       242 i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         242 LKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             HHHHhc-ChhhCCCHHHHhcCcccC
Confidence            999995 999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-39  Score=294.97  Aligned_cols=254  Identities=21%  Similarity=0.364  Sum_probs=200.5

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .|++.+.||+|+||.||+|.+..+++.||+|.++..  ......+..|+.+++.+..  ..|++++++++.+..+...|+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~--~~~~~vi~~~~~~~~~~~~~l   79 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQ--SQPPNITKYYGSYLKGPRLWI   79 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhcc--CCCCCeeeEeeeeeeCCEEEE
Confidence            478889999999999999999999999999998642  2334556678888888743  247999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +|||+ +++|.+++...   .+++..+..++.|++.||.|||+.|++||||+|+||+++                     
T Consensus        80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~---------------------  135 (277)
T cd06917          80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT---------------------  135 (277)
T ss_pred             EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc---------------------
Confidence            99999 89999998654   589999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            ..+.++|+|||.+.......   ....|+..|+|||.+.+ ..++.++|+|||||++|+|++|..||.......
T Consensus       136 ------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~  209 (277)
T cd06917         136 ------NTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR  209 (277)
T ss_pred             ------CCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence                  45567777777765433221   23468889999998865 457899999999999999999999997644322


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+...  .++                    ..+                         ....+.++.+++.+||+.|
T Consensus       210 ~~~~~~~~--~~~--------------------~~~-------------------------~~~~~~~~~~~i~~~l~~~  242 (277)
T cd06917         210 AMMLIPKS--KPP--------------------RLE-------------------------DNGYSKLLREFVAACLDEE  242 (277)
T ss_pred             hhhccccC--CCC--------------------CCC-------------------------cccCCHHHHHHHHHHcCCC
Confidence            11110000  000                    000                         0124568999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~~  376 (379)
                      |++||++.|+++||||++..
T Consensus       243 p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         243 PKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             cccCcCHHHHhhChHhhccc
Confidence            99999999999999997754

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=3e-39  Score=299.20  Aligned_cols=254  Identities=21%  Similarity=0.303  Sum_probs=191.1

Q ss_pred             chhhhhhhhccccccceeEEEEEecC----------------CCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCC
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRE----------------RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKG  102 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~----------------~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~  102 (379)
                      ....|++.++||+|+||.||+|.+..                ++..||+|++...  ......+.+|+.++..+     .
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~   77 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRL-----K   77 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhc-----C
Confidence            44568889999999999999997532                3457999998743  22345677898888887     6


Q ss_pred             CCeeEEecceeeecceEEEEEeCC-CCCHHHHHHhCCC-----------------CCCCHHHHHHHHHHHHHHHHHHHHc
Q 017021          103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNY-----------------RSFPIDLVREIARQLLECIAFMHDL  164 (379)
Q Consensus       103 ~~~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~-----------------~~l~~~~~~~~~~qi~~aL~~LH~~  164 (379)
                      |+|++++++++.+.+..+++|||+ +++|.+++.....                 ..+++..+..++.||+.||.|||+.
T Consensus        78 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~  157 (304)
T cd05096          78 DPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL  157 (304)
T ss_pred             CCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence            799999999999999999999999 8999999865321                 1357788999999999999999999


Q ss_pred             CCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchh
Q 017021          165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPE  239 (379)
Q Consensus       165 ~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE  239 (379)
                      |++||||||+||+++                           .++.++|+|||.+.......     ....++..|+|||
T Consensus       158 ~ivH~dlkp~Nill~---------------------------~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE  210 (304)
T cd05096         158 NFVHRDLATRNCLVG---------------------------ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWE  210 (304)
T ss_pred             CccccCcchhheEEc---------------------------CCccEEECCCccceecccCceeEecCcCCCCccccCHH
Confidence            999999999999994                           44566777777665332221     1224567899999


Q ss_pred             hhhCCCCCCccchHhHHHHHHHHHh--CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCc
Q 017021          240 VILGLGWTYPCDIWSVGCILVELCT--GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAAS  317 (379)
Q Consensus       240 ~~~~~~~~~~sDvwSlG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (379)
                      .+.+..++.++|||||||++|+|++  +..||...+..+...............                 . .      
T Consensus       211 ~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-----------------~-~------  266 (304)
T cd05096         211 CILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQ-----------------V-Y------  266 (304)
T ss_pred             HHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhcccc-----------------c-c------
Confidence            9988889999999999999999986  567887655444333222211000000                 0 0      


Q ss_pred             hhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHh
Q 017021          318 RESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL  367 (379)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l  367 (379)
                                       ......++..+.+++.+||+.||.+|||+.|+.
T Consensus       267 -----------------~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~  299 (304)
T cd05096         267 -----------------LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH  299 (304)
T ss_pred             -----------------ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence                             000123567899999999999999999999995

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=1.5e-39  Score=304.50  Aligned_cols=301  Identities=17%  Similarity=0.216  Sum_probs=195.0

Q ss_pred             hhhccccc--cceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           47 IHSKMGEG--TFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        47 i~~~Lg~G--~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      +...||.|  +||+||+|++..+|+.||+|++....   ...+.+..|+.++..+     +|+|++++++++..++..++
T Consensus         2 ~~~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l-----~h~niv~~~~~~~~~~~~~~   76 (328)
T cd08226           2 LQVEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFF-----RHPNIMTSWTVFTTGSWLWV   76 (328)
T ss_pred             hHHHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCcceEeeeEecCCceEE
Confidence            34667777  99999999999999999999987432   2234455666666655     78999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      |+||+ +++|.+++.......+++..+..++.|++.||+|||+.|++||||||+||++..++.+++.+|+.+........
T Consensus        77 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~  156 (328)
T cd08226          77 ISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQ  156 (328)
T ss_pred             EEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCc
Confidence            99999 88999999876544689999999999999999999999999999999999997666555555542211110000


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCC--CCCCccchHhHHHHHHHHHhCCCCCCCCchHHHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  278 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~  278 (379)
                                       .............++..|+|||++.+.  .++.++|||||||++|+|++|+.||......+..
T Consensus       157 -----------------~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~  219 (328)
T cd08226         157 -----------------KAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQML  219 (328)
T ss_pred             -----------------cccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHH
Confidence                             000000000112345679999998763  4789999999999999999999999865543322


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhh----hccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS----VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      ..........|...  ...........++...+... ........    .+....   ........++..+.+||++||+
T Consensus       220 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~  293 (328)
T cd08226         220 LQKLKGPPYSPLDI--TTFPCEESRMKNSQSGVDSG-IGESVVAAGMTQTMTSER---LRTPSSKTFSPAFQNLVELCLQ  293 (328)
T ss_pred             HHHhcCCCCCCccc--cccchhhhhhccchhhhhcc-cccchhcccccccccccc---ccchhhhhhhHHHHHHHHHHcc
Confidence            22111111111000  00000000000000000000 00000000    000000   0011123467889999999999


Q ss_pred             cCCCCCcCHHHHhcCCCCCCC
Q 017021          355 YDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      .||++|||++|+++||||...
T Consensus       294 ~dP~~Rpta~e~l~~~~~~~~  314 (328)
T cd08226         294 QDPEKRPSASSLLSHAFFKQV  314 (328)
T ss_pred             CCcccCCCHHHHhhCHHHHHH
Confidence            999999999999999999753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=1.8e-39  Score=296.51  Aligned_cols=270  Identities=27%  Similarity=0.397  Sum_probs=206.0

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|.+.+.||+|++|.||+|.+..+++.||+|++...    .........|..++.++.    .|++++++++.+...+..
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~----~~~~i~~~~~~~~~~~~~   77 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN----GHPGIIKLYYTFQDEENL   77 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcc----cCCCchhHHHHhcCCceE
Confidence            478889999999999999999999999999998642    222345566777777762    389999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      +++||++ +++|.+++.+..  .+++..+..++.|++.||.+||+.|++|+|++|+||++..++.+++.|||++......
T Consensus        78 ~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~  155 (280)
T cd05581          78 YFVLEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN  155 (280)
T ss_pred             EEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence            9999999 999999998765  6999999999999999999999999999999999999987777777777766443222


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  278 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~  278 (379)
                      .....    .......++..............++..|+|||...+..++.++|+||||++++++++|..||...+.....
T Consensus       156 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~  231 (280)
T cd05581         156 SSPES----NKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTF  231 (280)
T ss_pred             ccccc----CCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence            11100    00000011111111111223345788999999998888899999999999999999999999876644433


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCC
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  358 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  358 (379)
                      ..+.......|                                                 ...+..+.++|++||+.||+
T Consensus       232 ~~~~~~~~~~~-------------------------------------------------~~~~~~~~~li~~~l~~~p~  262 (280)
T cd05581         232 QKILKLEYSFP-------------------------------------------------PNFPPDAKDLIEKLLVLDPQ  262 (280)
T ss_pred             HHHHhcCCCCC-------------------------------------------------CccCHHHHHHHHHHhcCCHh
Confidence            33322111111                                                 12456889999999999999


Q ss_pred             CCcCH----HHHhcCCCC
Q 017021          359 DRLTA----REALRHPFF  372 (379)
Q Consensus       359 ~Rpta----~e~l~hp~f  372 (379)
                      +|||+    .|+++||||
T Consensus       263 ~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         263 DRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             hCCCcccCHHHHhcCCCC
Confidence            99999    999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=2.9e-39  Score=295.30  Aligned_cols=251  Identities=28%  Similarity=0.411  Sum_probs=201.0

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ...|++.++||+|+||.||+|.+..+++.||+|++....  .....+.+|+..+..+     .|++++++++.+..+...
T Consensus         3 ~~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~   77 (277)
T cd06641           3 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYVTKYYGSYLKDTKL   77 (277)
T ss_pred             HHhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhc-----CCCCEeEEEEEEEeCCeE
Confidence            346888999999999999999999999999999986332  2334566788887777     779999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++...   .++...+..++.|++.|+.+||+.|++|+||+|+||++                    
T Consensus        78 ~lv~e~~~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i--------------------  134 (277)
T cd06641          78 WIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL--------------------  134 (277)
T ss_pred             EEEEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEE--------------------
Confidence            9999999 88999988753   48999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                             +.++.++|+|||.+......   .....++..|+|||.+.+..++.++|+|||||++|+|++|..||......
T Consensus       135 -------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~  207 (277)
T cd06641         135 -------SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM  207 (277)
T ss_pred             -------CCCCCEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH
Confidence                   44456777777766533222   12345788899999998888899999999999999999999999764433


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      .....+...  ..+                                              ......+.++.+++.+||+.
T Consensus       208 ~~~~~~~~~--~~~----------------------------------------------~~~~~~~~~~~~~i~~~l~~  239 (277)
T cd06641         208 KVLFLIPKN--NPP----------------------------------------------TLEGNYSKPLKEFVEACLNK  239 (277)
T ss_pred             HHHHHHhcC--CCC----------------------------------------------CCCcccCHHHHHHHHHHccC
Confidence            322211110  000                                              00113456789999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||++||++.++++||||.+.
T Consensus       240 ~p~~Rp~~~~~l~~~~~~~~  259 (277)
T cd06641         240 EPSFRPTAKELLKHKFIVRF  259 (277)
T ss_pred             ChhhCcCHHHHHhCHHHhhh
Confidence            99999999999999999754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-40  Score=283.60  Aligned_cols=252  Identities=24%  Similarity=0.378  Sum_probs=200.4

Q ss_pred             hhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEE
Q 017021           46 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  123 (379)
Q Consensus        46 ~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~  123 (379)
                      +++..||+|..|.||+++.+.+|...|||.+...  .....+++..+.+...-    .+.+.||+++++|..+..+++.|
T Consensus        95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s----~dcpyIV~c~GyFi~n~dV~IcM  170 (391)
T KOG0983|consen   95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKS----HDCPYIVQCFGYFITNTDVFICM  170 (391)
T ss_pred             hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhc----cCCCeeeeeeeEEeeCchHHHHH
Confidence            4678999999999999999999999999999743  33345555566655442    25799999999999999999999


Q ss_pred             eCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          124 EKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       124 e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      |.|+.-+..++..-. +++++..+-.+...++.||.||. ++||+|||+||+|||+                        
T Consensus       171 elMs~C~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl------------------------  225 (391)
T KOG0983|consen  171 ELMSTCAEKLLKRIK-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL------------------------  225 (391)
T ss_pred             HHHHHHHHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE------------------------
Confidence            999766777776644 36999999999999999999997 7889999999999999                        


Q ss_pred             ccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhC---CCCCCccchHhHHHHHHHHHhCCCCCCCCc-hHH
Q 017021          203 KRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELCTGEALFQTHE-NLE  276 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~il~~l~~g~~pf~~~~-~~~  276 (379)
                         +..+.+||||||.+...-...  ....|.+.|+|||.+.-   ..|+.++||||||++++||+||..||.+.+ +.+
T Consensus       226 ---De~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe  302 (391)
T KOG0983|consen  226 ---DERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE  302 (391)
T ss_pred             ---ccCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH
Confidence               555667888888776543333  23478999999999853   468999999999999999999999999854 444


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ..-.+.+...|.-.                                              ....+++.+++|+..||++|
T Consensus       303 ~ltkvln~ePP~L~----------------------------------------------~~~gFSp~F~~fv~~CL~kd  336 (391)
T KOG0983|consen  303 VLTKVLNEEPPLLP----------------------------------------------GHMGFSPDFQSFVKDCLTKD  336 (391)
T ss_pred             HHHHHHhcCCCCCC----------------------------------------------cccCcCHHHHHHHHHHhhcC
Confidence            44444332211100                                              01237899999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~  375 (379)
                      +.+||.-.++|+|||+..=
T Consensus       337 ~r~RP~Y~~Ll~h~Fi~~y  355 (391)
T KOG0983|consen  337 HRKRPKYNKLLEHPFIKRY  355 (391)
T ss_pred             cccCcchHHHhcCcceeec
Confidence            9999999999999998753

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=5.5e-39  Score=294.98  Aligned_cols=263  Identities=23%  Similarity=0.357  Sum_probs=198.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee--cceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--RNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~--~~~~  119 (379)
                      .|++.++||.|++|.||++.+..+++.+|+|++....  .....+.+|++++..+     .|+|++.+++++..  ++.+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~~   76 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSC-----KSPYIVKYYGAFLDESSSSI   76 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhC-----CCCCeeeeeeEEEccCCCeE
Confidence            3567789999999999999999999999999987432  2445677888888887     78999999998754  4578


Q ss_pred             EEEEeCC-CCCHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~--~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      |+||||+ +++|.+++..  .....++...+..++.||+.||.|||+.|++|+||+|+||+++                 
T Consensus        77 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~-----------------  139 (287)
T cd06621          77 GIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT-----------------  139 (287)
T ss_pred             EEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe-----------------
Confidence            9999999 8999988764  2223588999999999999999999999999999999999994                 


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC-CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch-
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN-  274 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~-  274 (379)
                                .+..++|+|||.+....... ....++..|+|||.+.+..++.++|+|||||++|+|++|..||..... 
T Consensus       140 ----------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~  209 (287)
T cd06621         140 ----------RKGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP  209 (287)
T ss_pred             ----------cCCeEEEeeccccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC
Confidence                      44557777777765432221 234567889999999888899999999999999999999999975421 


Q ss_pred             -HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          275 -LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       275 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                       ..............+.                   ..+..                    .......++.+.++|.+||
T Consensus       210 ~~~~~~~~~~~~~~~~~-------------------~~~~~--------------------~~~~~~~~~~~~~li~~~l  250 (287)
T cd06621         210 PLGPIELLSYIVNMPNP-------------------ELKDE--------------------PGNGIKWSEEFKDFIKQCL  250 (287)
T ss_pred             CCChHHHHHHHhcCCch-------------------hhccC--------------------CCCCCchHHHHHHHHHHHc
Confidence             0000000000000000                   00000                    0000124567899999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          354 RYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      +.||++|||+.|+++||||+...-
T Consensus       251 ~~~p~~Rpt~~eil~~~~~~~~~~  274 (287)
T cd06621         251 EKDPTRRPTPWDMLEHPWIKAQMK  274 (287)
T ss_pred             CCCcccCCCHHHHHhCcccccccc
Confidence            999999999999999999966543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=5.9e-39  Score=294.56  Aligned_cols=251  Identities=26%  Similarity=0.438  Sum_probs=200.4

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      .|.-.+.||+|++|.||++.+..+++.+|+|++.... .....+.+|+.++..+     .|++++++++.+..++..+++
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~-----~h~~vv~~~~~~~~~~~~~~v   94 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDY-----QHPNIVEMYSSYLVGDELWVV   94 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHc-----CCCChheEEEEEEcCCeEEEE
Confidence            4455579999999999999999999999999986432 2334566788887777     779999999999999999999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      +||+ +++|.+++...   .++...+..++.|++.||+|||+.|++||||+|+||++                       
T Consensus        95 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~-----------------------  148 (285)
T cd06648          95 MEFLEGGALTDIVTHT---RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL-----------------------  148 (285)
T ss_pred             EeccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEE-----------------------
Confidence            9999 89999998773   58999999999999999999999999999999999999                       


Q ss_pred             cccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  278 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~  278 (379)
                          +.++.++|+|||.+......   .....|+..|+|||.+.+..++.++|+|||||++|+|++|..||...+..+..
T Consensus       149 ----~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~  224 (285)
T cd06648         149 ----TSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAM  224 (285)
T ss_pred             ----cCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHH
Confidence                44556777777765432221   12345888999999998888999999999999999999999999765554443


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCC
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  358 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  358 (379)
                      ..+.....+...                                              .....+..+.++|++||+.||+
T Consensus       225 ~~~~~~~~~~~~----------------------------------------------~~~~~~~~l~~li~~~l~~~p~  258 (285)
T cd06648         225 KRIRDNLPPKLK----------------------------------------------NLHKVSPRLRSFLDRMLVRDPA  258 (285)
T ss_pred             HHHHhcCCCCCc----------------------------------------------ccccCCHHHHHHHHHHcccChh
Confidence            332221100000                                              0012456899999999999999


Q ss_pred             CCcCHHHHhcCCCCCCC
Q 017021          359 DRLTAREALRHPFFTRD  375 (379)
Q Consensus       359 ~Rpta~e~l~hp~f~~~  375 (379)
                      +|||+.++++||||+..
T Consensus       259 ~Rpt~~~il~~~~~~~~  275 (285)
T cd06648         259 QRATAAELLNHPFLAKA  275 (285)
T ss_pred             hCcCHHHHccCcccccC
Confidence            99999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=3.8e-39  Score=291.65  Aligned_cols=245  Identities=29%  Similarity=0.512  Sum_probs=197.0

Q ss_pred             cccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC
Q 017021           51 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  126 (379)
Q Consensus        51 Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~  126 (379)
                      ||.|+||.||++++..+++.+|+|++....    .....+..|+..+..+     .|+|++++++.+..++..|+++|++
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~~lv~e~~   75 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-----QSPYVVKLYYSFQGKKNLYLVMEYL   75 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC-----CCcchhHHHHheecCcEEEEEEecC
Confidence            689999999999999999999999986432    2344566677777777     6799999999999999999999999


Q ss_pred             -CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccC
Q 017021          127 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  205 (379)
Q Consensus       127 -~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (379)
                       +++|.+++.+..  .+++..+..++.|++.||+|||+.|++||||+|+||+++                          
T Consensus        76 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~--------------------------  127 (265)
T cd05579          76 PGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILID--------------------------  127 (265)
T ss_pred             CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEc--------------------------
Confidence             889999998765  689999999999999999999999999999999999994                          


Q ss_pred             CCCCCeEEeecCcccccCCC-----------CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          206 PKSSAIKVIDFGSTTYERPD-----------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       206 ~~~~~~~l~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                       .++.++|+|||.+......           .....++..|+|||.......+.++|+||||+++|++++|..||.....
T Consensus       128 -~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~  206 (265)
T cd05579         128 -SNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP  206 (265)
T ss_pred             -CCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH
Confidence             4455666677665432221           1234578889999999888889999999999999999999999987665


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .+....+....                       ..++..                        ...+..+.+++.+||+
T Consensus       207 ~~~~~~~~~~~-----------------------~~~~~~------------------------~~~~~~~~~~i~~~l~  239 (265)
T cd05579         207 EEIFQNILNGK-----------------------IEWPED------------------------VEVSDEAIDLISKLLV  239 (265)
T ss_pred             HHHHHHHhcCC-----------------------cCCCcc------------------------ccCCHHHHHHHHHHhc
Confidence            44443332211                       111110                        0135788999999999


Q ss_pred             cCCCCCcCH---HHHhcCCCCCCCC
Q 017021          355 YDPTDRLTA---REALRHPFFTRDH  376 (379)
Q Consensus       355 ~dP~~Rpta---~e~l~hp~f~~~~  376 (379)
                      .||++|||+   .++++||||++..
T Consensus       240 ~~p~~Rpt~~~~~~~l~~~~~~~~~  264 (265)
T cd05579         240 PDPEKRLGAKSIEEIKNHPFFKGID  264 (265)
T ss_pred             CCHhhcCCCccHHHHhcCccccCCC
Confidence            999999999   9999999998653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=1.6e-39  Score=299.47  Aligned_cols=253  Identities=26%  Similarity=0.415  Sum_probs=201.2

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ...|++.+.||+|+||.||++.+..++..||+|.+... ......+..|+.++..+     .|++++.+++.+......|
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-----~hp~i~~~~~~~~~~~~~~   92 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMREN-----KHPNIVNYLDSYLVGDELW   92 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhc-----CCCCeeehhheeeeCCcEE
Confidence            45788999999999999999999989999999998632 23345566788777776     6799999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +|+||+ +++|.+++.+.   .++...+..++.|++.||.|||+.|++|+||+|+||++.                    
T Consensus        93 lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~--------------------  149 (293)
T cd06647          93 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG--------------------  149 (293)
T ss_pred             EEEecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc--------------------
Confidence            999999 89999998764   378999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                             .++.++|+|||.+.......   ....|++.|+|||.+.+..++.++|+|||||++|++++|..||...+..+
T Consensus       150 -------~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~  222 (293)
T cd06647         150 -------MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR  222 (293)
T ss_pred             -------CCCCEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence                   44567777777654332221   23457888999999988888999999999999999999999997654432


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+..  +..+                    .+                        ...+..+..+.++|++||+.|
T Consensus       223 ~~~~~~~--~~~~--------------------~~------------------------~~~~~~~~~l~~li~~~l~~~  256 (293)
T cd06647         223 ALYLIAT--NGTP--------------------EL------------------------QNPEKLSAIFRDFLNRCLEMD  256 (293)
T ss_pred             heeehhc--CCCC--------------------CC------------------------CCccccCHHHHHHHHHHccCC
Confidence            2111100  0000                    00                        001124567899999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~  375 (379)
                      |++||++++++.||||+.-
T Consensus       257 p~~Rp~~~~il~h~~~~~~  275 (293)
T cd06647         257 VEKRGSAKELLQHPFLKIA  275 (293)
T ss_pred             hhhCcCHHHHhcCHHHhcC
Confidence            9999999999999999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=4.5e-39  Score=294.75  Aligned_cols=247  Identities=23%  Similarity=0.291  Sum_probs=195.3

Q ss_pred             hhhhhhhccccccceeEEEEEecCCC-----ceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERK-----EMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~-----~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      ..|++.+.||+|+||.||+|.+...+     ..||+|.+....  .....+.+|+..+..+     .|++++.+++++..
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l-----~h~~i~~~~~~~~~   79 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDL-----QHPNIVCLLGVCTK   79 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhc-----CCcccceEEEEEcC
Confidence            46889999999999999999876554     789999986432  2344567788888877     77999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEec
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNY--------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  180 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~--------------~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~  180 (379)
                      ....|++|||+ +++|.+++.....              ..++...+..++.|++.||.|||+.|++||||||+||+++ 
T Consensus        80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~-  158 (283)
T cd05048          80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG-  158 (283)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc-
Confidence            89999999999 8999999976421              3578889999999999999999999999999999999994 


Q ss_pred             ccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhH
Q 017021          181 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSV  255 (379)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSl  255 (379)
                                                .+..++|+|||.+.......     ....+++.|+|||.+.+..++.++|||||
T Consensus       159 --------------------------~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~sl  212 (283)
T cd05048         159 --------------------------EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSF  212 (283)
T ss_pred             --------------------------CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHH
Confidence                                      44556777777665322211     12345778999999988889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHH
Q 017021          256 GCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI  334 (379)
Q Consensus       256 G~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (379)
                      ||++|+|++ |..||.+.+..+....+.+...+.                                              
T Consensus       213 G~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~----------------------------------------------  246 (283)
T cd05048         213 GVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLP----------------------------------------------  246 (283)
T ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC----------------------------------------------
Confidence            999999998 999998766544433322211000                                              


Q ss_pred             HHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       335 ~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                        .....+.++.+|+.+||+.||.+||+++|++++
T Consensus       247 --~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         247 --CPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             --CcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence              012366789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=8.5e-39  Score=300.53  Aligned_cols=281  Identities=32%  Similarity=0.480  Sum_probs=211.8

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeec---cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee--cc
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--RN  117 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~--~~  117 (379)
                      ..|.+.+.||+|+||.||+|.+..+++.+|+|.+..   ..........|+.++.++    .+|+|++++++++..  ..
T Consensus         7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l----~~h~ni~~~~~~~~~~~~~   82 (337)
T cd07852           7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQEL----GDHPNIVKLLNVIKAENDK   82 (337)
T ss_pred             hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHh----cCCCCccceeeeeccCCCc
Confidence            468899999999999999999999999999998853   122334456688877776    356899999998764  34


Q ss_pred             eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          118 HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       118 ~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      ..|+||||++++|.+++...   .+++.....++.|++.||.|||+.|++||||+|+||+++.                 
T Consensus        83 ~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~-----------------  142 (337)
T cd07852          83 DIYLVFEYMETDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNS-----------------  142 (337)
T ss_pred             eEEEEecccccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC-----------------
Confidence            78999999987999988764   5788899999999999999999999999999999999954                 


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCC--------CCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPD--------QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                                ++.++|+|||.+......        .....||..|+|||.+.+ ..++.++|+||||+++|+|++|+.|
T Consensus       143 ----------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~p  212 (337)
T cd07852         143 ----------DCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPL  212 (337)
T ss_pred             ----------CCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCC
Confidence                      445666666655432211        122457889999998754 4578999999999999999999999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |.+....+....+....+..+...+..+...........                 ....... ......+..+.++.++
T Consensus       213 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~-~~~~~~~~~~~~l~~l  274 (337)
T cd07852         213 FPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDS-----------------LPSRPRK-PLDELLPKASDDALDL  274 (337)
T ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhh-----------------ccccccc-chhhhccCCCHHHHHH
Confidence            988877777777777777776665554433222111110                 0000000 0111223367889999


Q ss_pred             HhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          349 LQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      |.+||+.||++|||+.++++||||..-
T Consensus       275 i~~~l~~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         275 LKKLLVFNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             HHHhccCCcccccCHHHHhhChhhhhh
Confidence            999999999999999999999999653

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=5e-39  Score=306.14  Aligned_cols=252  Identities=22%  Similarity=0.318  Sum_probs=192.3

Q ss_pred             eechhhhhhhhccccccceeEEEEEe-----cCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWD-----RERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~-----~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      .++...|++.++||+|+||.||+|.+     ..++..||+|+++...  .....+.+|+.++..+.    .|+||+++++
T Consensus        31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~----~HpnIv~l~~  106 (375)
T cd05104          31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG----NHINIVNLLG  106 (375)
T ss_pred             ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhc----CCcceeeeee
Confidence            44555799999999999999999964     3567789999986432  23445677888888772    5789999999


Q ss_pred             eeeecceEEEEEeCC-CCCHHHHHHhCC----------------------------------------------------
Q 017021          112 WFDYRNHICIVFEKL-GSSLYDFLRKNN----------------------------------------------------  138 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~~sL~~~l~~~~----------------------------------------------------  138 (379)
                      ++..++..++||||+ +|+|.+++....                                                    
T Consensus       107 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  186 (375)
T cd05104         107 ACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKR  186 (375)
T ss_pred             eeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccc
Confidence            999999999999999 999999986532                                                    


Q ss_pred             ---------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          139 ---------------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       139 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                                           ...+++..+..++.||+.||.|||+.|++||||||+||+++.                 
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~-----------------  249 (375)
T cd05104         187 RSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTH-----------------  249 (375)
T ss_pred             cccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEEC-----------------
Confidence                                 113678889999999999999999999999999999999954                 


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCCC-----cccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQN-----YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQT  271 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~  271 (379)
                                +..++|+|||.+........     ...++..|+|||.+.+..++.++|||||||++|+|++ |..||..
T Consensus       250 ----------~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~  319 (375)
T cd05104         250 ----------GRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPG  319 (375)
T ss_pred             ----------CCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCC
Confidence                      44566777776654332211     1234567999999999899999999999999999998 8899976


Q ss_pred             CchHHHHHH-HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          272 HENLEHLAM-MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       272 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      ......... +......                      ..                          ....+.++.++|.
T Consensus       320 ~~~~~~~~~~~~~~~~~----------------------~~--------------------------~~~~~~~l~~li~  351 (375)
T cd05104         320 MPVDSKFYKMIKEGYRM----------------------LS--------------------------PECAPSEMYDIMK  351 (375)
T ss_pred             CCchHHHHHHHHhCccC----------------------CC--------------------------CCCCCHHHHHHHH
Confidence            433221111 1110000                      00                          0123467999999


Q ss_pred             hccccCCCCCcCHHHHhcC
Q 017021          351 GLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~h  369 (379)
                      +||+.||++|||++|+++.
T Consensus       352 ~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         352 SCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             HHccCChhHCcCHHHHHHH
Confidence            9999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-40  Score=314.03  Aligned_cols=249  Identities=27%  Similarity=0.425  Sum_probs=205.5

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeec-cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRG-IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-  126 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-  126 (379)
                      -+||+|.||+||-|+|..|+...|||.+.. .....+..++|+..-.++     .|.|||++.+++..++++-|.||-. 
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~L-----rHkNIVrYLGs~senGf~kIFMEqVP  655 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTL-----RHKNIVRYLGSVSENGFFKIFMEQVP  655 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHH-----hhHhHHHHhhccCCCCeEEEEeecCC
Confidence            589999999999999999999999999863 344556677888888888     6689999999999999999999999 


Q ss_pred             CCCHHHHHHhCCCCCC--CHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccccc
Q 017021          127 GSSLYDFLRKNNYRSF--PIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR  204 (379)
Q Consensus       127 ~~sL~~~l~~~~~~~l--~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (379)
                      ||+|.+++..+.+ ++  .+...-.+..||++||.|||...|+|||||-+|+|++                         
T Consensus       656 GGSLSsLLrskWG-PlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN-------------------------  709 (1226)
T KOG4279|consen  656 GGSLSSLLRSKWG-PLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN-------------------------  709 (1226)
T ss_pred             CCcHHHHHHhccC-CCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe-------------------------
Confidence            9999999998763 56  6788999999999999999999999999999999996                         


Q ss_pred             CCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCC--CCCCccchHhHHHHHHHHHhCCCCCCCCchHHHH-
Q 017021          205 MPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-  278 (379)
Q Consensus       205 ~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~-  278 (379)
                       .-.+.+||.|||-+++....   ..++.||..|||||++...  .|+.++|||||||++.||+||++||......... 
T Consensus       710 -TySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM  788 (1226)
T KOG4279|consen  710 -TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM  788 (1226)
T ss_pred             -eccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh
Confidence             34467888888877653332   3457899999999999753  5899999999999999999999999754332211 


Q ss_pred             --HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          279 --AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       279 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                        ..+.+...+.|                                                 +..+.+++.||.+|+.+|
T Consensus       789 FkVGmyKvHP~iP-------------------------------------------------eelsaeak~FilrcFepd  819 (1226)
T KOG4279|consen  789 FKVGMYKVHPPIP-------------------------------------------------EELSAEAKNFILRCFEPD  819 (1226)
T ss_pred             hhhcceecCCCCc-------------------------------------------------HHHHHHHHHHHHHHcCCC
Confidence              01111122222                                                 246788999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCCCcC
Q 017021          357 PTDRLTAREALRHPFFTRDHLR  378 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~~~~  378 (379)
                      |.+||+|.++|.-||++..+.|
T Consensus       820 ~~~R~sA~~LL~DpFlq~~~kk  841 (1226)
T KOG4279|consen  820 PCDRPSAKDLLQDPFLQHNNKK  841 (1226)
T ss_pred             cccCccHHHhccCcccccCCCC
Confidence            9999999999999999987544

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=6.6e-39  Score=290.07  Aligned_cols=249  Identities=23%  Similarity=0.403  Sum_probs=198.0

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee--ecce
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD--YRNH  118 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~--~~~~  118 (379)
                      .|++.+.||.|+||.||+|.+..+++.||+|++...   ......+..|+.++..+     .|++++++++.+.  .+..
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILREL-----KHPNIVRYYDRIIDRSNQT   75 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhc-----CCCccceeeeeeecCCCCE
Confidence            377889999999999999999999999999998642   22344566788888887     7789999988765  3457


Q ss_pred             EEEEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHH-----HcCCcccCCCCCcEEEecccccccCCCc
Q 017021          119 ICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMH-----DLCMIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH-----~~~iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                      .+++|||+ +++|.+++...  ....+++..+..++.||+.||.|||     +.+++|+||+|+||+++           
T Consensus        76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~-----------  144 (265)
T cd08217          76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD-----------  144 (265)
T ss_pred             EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEe-----------
Confidence            89999999 89999999763  2246899999999999999999999     89999999999999994           


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCC
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                                      .++.++|+|||.+.......   ....++..|+|||.+.+..++.++|+||||+++|+|++|+.
T Consensus       145 ----------------~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~  208 (265)
T cd08217         145 ----------------ANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSP  208 (265)
T ss_pred             ----------------cCCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCC
Confidence                            45567777777766443322   23467889999999988888999999999999999999999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ||...+..+....+....  .+                    .                          .....+..+.+
T Consensus       209 p~~~~~~~~~~~~~~~~~--~~--------------------~--------------------------~~~~~~~~~~~  240 (265)
T cd08217         209 PFTARNQLQLASKIKEGK--FR--------------------R--------------------------IPYRYSSELNE  240 (265)
T ss_pred             cccCcCHHHHHHHHhcCC--CC--------------------C--------------------------CccccCHHHHH
Confidence            998765333222221110  00                    0                          11235678999


Q ss_pred             HHhhccccCCCCCcCHHHHhcCCCC
Q 017021          348 LLQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      ++.+||+.||++|||+.++++|||+
T Consensus       241 l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         241 VIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HHHHHccCCcccCCCHHHHhhCCCC
Confidence            9999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=5e-39  Score=290.93  Aligned_cols=248  Identities=23%  Similarity=0.333  Sum_probs=196.3

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      +....|++.++||+|++|.||+|.+. ++..||+|.+.........+..|+.++..+     .|++++++++.+...+..
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   76 (261)
T cd05072           3 IPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTL-----QHDKLVRLYAVVTKEEPI   76 (261)
T ss_pred             CchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhC-----CCCCeeeEEEEEcCCCCc
Confidence            34567899999999999999999865 456799999875555556777899998887     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      +++|||+ +++|.+++.......++...+..++.|++.||+|||+.|++||||||+||+++.+                 
T Consensus        77 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~-----------------  139 (261)
T cd05072          77 YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSES-----------------  139 (261)
T ss_pred             EEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCC-----------------
Confidence            9999999 8999999977554568899999999999999999999999999999999999544                 


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCc
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  273 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~  273 (379)
                                +.++|+|||.+.......    ....++..|+|||.+.+..++.++|+|||||++|+|++ |..||....
T Consensus       140 ----------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~  209 (261)
T cd05072         140 ----------LMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS  209 (261)
T ss_pred             ----------CcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC
Confidence                      445666666654332211    11234667999999988888999999999999999998 999997655


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.+.... +                                               .....+.++.+++.+||
T Consensus       210 ~~~~~~~~~~~~~~-~-----------------------------------------------~~~~~~~~~~~li~~~l  241 (261)
T cd05072         210 NSDVMSALQRGYRM-P-----------------------------------------------RMENCPDELYDIMKTCW  241 (261)
T ss_pred             HHHHHHHHHcCCCC-C-----------------------------------------------CCCCCCHHHHHHHHHHc
Confidence            44433332221100 0                                               01135568899999999


Q ss_pred             ccCCCCCcCHHHHhc
Q 017021          354 RYDPTDRLTAREALR  368 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~  368 (379)
                      ..||++|||++++++
T Consensus       242 ~~~p~~Rp~~~~i~~  256 (261)
T cd05072         242 KEKAEERPTFDYLQS  256 (261)
T ss_pred             cCCcccCcCHHHHHH
Confidence            999999999999874

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=6.1e-39  Score=293.31  Aligned_cols=248  Identities=21%  Similarity=0.313  Sum_probs=195.1

Q ss_pred             chhhhhhhhccccccceeEEEEEec-----CCCceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      ....|.+.+.||+|+||.||+|.+.     .+++.||+|+++....  ....+.+|++++..+     .|++++.+++++
T Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~   77 (280)
T cd05049           3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNF-----QHENIVKFYGVC   77 (280)
T ss_pred             ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhc-----CCCCchheeeEE
Confidence            3457889999999999999999874     3468899999874332  345677898888887     678999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEec
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNN------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  180 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~  180 (379)
                      ......+++|||+ +++|.+++...+            ...+++..+..++.|++.||.+||+.|++||||||+||+++.
T Consensus        78 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~  157 (280)
T cd05049          78 TEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGY  157 (280)
T ss_pred             ecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcC
Confidence            9999999999999 999999997643            124788899999999999999999999999999999999954


Q ss_pred             ccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhhCCCCCCccchHhH
Q 017021          181 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSV  255 (379)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvwSl  255 (379)
                                                 ++.++|+|||.+......     .....++..|+|||.+.+..++.++|||||
T Consensus       158 ---------------------------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  210 (280)
T cd05049         158 ---------------------------DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF  210 (280)
T ss_pred             ---------------------------CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHH
Confidence                                       455666666655432111     112245678999999998899999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHH
Q 017021          256 GCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI  334 (379)
Q Consensus       256 G~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (379)
                      ||++|+|++ |..||...+..+....+.+.....                                              
T Consensus       211 G~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------------------------  244 (280)
T cd05049         211 GVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQ----------------------------------------------  244 (280)
T ss_pred             HHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCC----------------------------------------------
Confidence            999999998 999997665544333222111000                                              


Q ss_pred             HHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       335 ~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                        .....+..+.+++++||+.||++|||+.|+++
T Consensus       245 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         245 --RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             --CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence              01135678999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=6.5e-39  Score=290.23  Aligned_cols=253  Identities=27%  Similarity=0.459  Sum_probs=203.9

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .|++.+.||+|++|.||+|.+..+++.||+|++....  .....+..|+..+..+     .|++++++++.+...+..++
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~l   76 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSC-----ESPYVVKCYGAFYKEGEISI   76 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhc-----CCCCeeeEEEEEccCCeEEE
Confidence            4678899999999999999999999999999987543  3456677788888887     57899999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      ++||+ +++|.+++....  .+++..+..++.|++.||+|||+ .|++||||+|+||++                     
T Consensus        77 v~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~---------------------  133 (264)
T cd06623          77 VLEYMDGGSLADLLKKVG--KIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI---------------------  133 (264)
T ss_pred             EEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEE---------------------
Confidence            99999 899999998753  68999999999999999999999 999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            +.++.++|+|||.+.......   ....++..|+|||.+.+..++.++|+||||+++|+|++|..||.......
T Consensus       134 ------~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~  207 (264)
T cd06623         134 ------NSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS  207 (264)
T ss_pred             ------CCCCCEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC
Confidence                  455667777777765443322   13467889999999988888999999999999999999999997654211


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc-chhHHHHHHhhcccc
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH-SAGDLTHLLQGLLRY  355 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~  355 (379)
                      .............                   ...                          ... .+..+.++|++||..
T Consensus       208 ~~~~~~~~~~~~~-------------------~~~--------------------------~~~~~~~~l~~li~~~l~~  242 (264)
T cd06623         208 FFELMQAICDGPP-------------------PSL--------------------------PAEEFSPEFRDFISACLQK  242 (264)
T ss_pred             HHHHHHHHhcCCC-------------------CCC--------------------------CcccCCHHHHHHHHHHccC
Confidence            1111111111000                   000                          112 567899999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +|++|||+.|+++||||+.-
T Consensus       243 ~p~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         243 DPKKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             ChhhCCCHHHHHhCHHHHhc
Confidence            99999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=1.4e-38  Score=296.06  Aligned_cols=253  Identities=25%  Similarity=0.363  Sum_probs=201.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|...++||+|+||+||+|.+..+++.||+|++....    .....+..|+.+++.+     .|++++.+++++.+....
T Consensus        22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   96 (313)
T cd06633          22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-----KHPNTIEYKGCYLKEHTA   96 (313)
T ss_pred             HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-----CCCCCccEEEEEEeCCEE
Confidence            3666688999999999999999999999999986322    2224556788888877     679999999999999999


Q ss_pred             EEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       120 ~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      |+||||+.+++.+++.... ..+++..+..++.|++.||.|||+.|++||||+|+||++                     
T Consensus        97 ~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili---------------------  154 (313)
T cd06633          97 WLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---------------------  154 (313)
T ss_pred             EEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEE---------------------
Confidence            9999999778888886643 358999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhh---CCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            ..++.++|+|||.+..... .....|+..|+|||.+.   ...++.++|+|||||++|+|++|..||...+...
T Consensus       155 ------~~~~~~kL~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~  227 (313)
T cd06633         155 ------TEPGQVKLADFGSASKSSP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS  227 (313)
T ss_pred             ------CCCCCEEEeecCCCcccCC-CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence                  4455678888887654322 23456888999999974   3457889999999999999999999997765544


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+....  .+..                                             ....++..+.+|+.+||+.+
T Consensus       228 ~~~~~~~~~--~~~~---------------------------------------------~~~~~~~~l~~li~~~l~~~  260 (313)
T cd06633         228 ALYHIAQND--SPTL---------------------------------------------QSNEWTDSFRGFVDYCLQKI  260 (313)
T ss_pred             HHHHHHhcC--CCCC---------------------------------------------CccccCHHHHHHHHHHccCC
Confidence            333222111  1100                                             01124567899999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCCCc
Q 017021          357 PTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~~~  377 (379)
                      |.+||++.+++.||||.....
T Consensus       261 P~~Rp~~~~~l~~~~~~~~~~  281 (313)
T cd06633         261 PQERPASAELLRHDFVRRDRP  281 (313)
T ss_pred             hhhCcCHHHHhcCcccCCCch
Confidence            999999999999999987554

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=8.4e-39  Score=289.63  Aligned_cols=249  Identities=29%  Similarity=0.459  Sum_probs=196.7

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccch---hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      +|++.+.||+|++|.||++.+..+++.||+|.++....   ....+..|+.++..+     .|++++++++.+...+..+
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l-----~~~~i~~~~~~~~~~~~~~   75 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELL-----KHPNLVKYYGVEVHREKVY   75 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhC-----CCCChhheeeeEecCCEEE
Confidence            47888999999999999999998999999999975433   456677788888887     6789999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +|+||+ +++|.+++....  .+++..+..++.+++.||.|||+.|++|+||+|+||+++.+                  
T Consensus        76 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~------------------  135 (264)
T cd06626          76 IFMEYCSGGTLEELLEHGR--ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHN------------------  135 (264)
T ss_pred             EEEecCCCCcHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC------------------
Confidence            999999 899999998754  57899999999999999999999999999999999999544                  


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC-------CcccccCCccchhhhhCCC---CCCccchHhHHHHHHHHHhCCCCC
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~---~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                               +.++|+|||.+.......       ....++..|+|||.+.+..   ++.++||||||+++|++++|..||
T Consensus       136 ---------~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf  206 (264)
T cd06626         136 ---------GVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPW  206 (264)
T ss_pred             ---------CCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCc
Confidence                     455666666554332221       1235678999999987765   789999999999999999999999


Q ss_pred             CCCch-HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          270 QTHEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       270 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      ..... ......+..  +..+                    ..|.                        ....+..+.++
T Consensus       207 ~~~~~~~~~~~~~~~--~~~~--------------------~~~~------------------------~~~~~~~~~~l  240 (264)
T cd06626         207 SELDNEFQIMFHVGA--GHKP--------------------PIPD------------------------SLQLSPEGKDF  240 (264)
T ss_pred             cCCcchHHHHHHHhc--CCCC--------------------CCCc------------------------ccccCHHHHHH
Confidence            75432 111111111  1111                    0000                        01235678899


Q ss_pred             HhhccccCCCCCcCHHHHhcCCCC
Q 017021          349 LQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      |.+||+.||++|||+.|++.|||+
T Consensus       241 i~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         241 LDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             HHHHccCCcccCCCHHHHhcCCCC
Confidence            999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=4e-39  Score=306.56  Aligned_cols=251  Identities=23%  Similarity=0.318  Sum_probs=190.8

Q ss_pred             echhhhhhhhccccccceeEEEEEecCC-----CceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRER-----KEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~-----~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      +....|++.+.||+|+||.||+|.+..+     +..||+|.++...  .....+..|+.+++.+    ..|+||+++++.
T Consensus        35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l----~~h~nIv~~~~~  110 (374)
T cd05106          35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHL----GQHKNIVNLLGA  110 (374)
T ss_pred             ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhh----ccCCceeeEeeE
Confidence            4556789999999999999999986544     3579999997432  2234566788888776    257899999999


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCC-----------------------------------------------------
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNN-----------------------------------------------------  138 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~-----------------------------------------------------  138 (379)
                      +...+..++||||+ +++|.+++....                                                     
T Consensus       111 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (374)
T cd05106         111 CTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS  190 (374)
T ss_pred             ecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence            99999999999999 999999986431                                                     


Q ss_pred             ---------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          139 ---------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       139 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                                     ...+++..+..++.||+.||.|||+.|++||||||+||+++.                       
T Consensus       191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~-----------------------  247 (374)
T cd05106         191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTD-----------------------  247 (374)
T ss_pred             ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeC-----------------------
Confidence                           124678889999999999999999999999999999999954                       


Q ss_pred             cCCCCCCeEEeecCcccccCCCCC-----cccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHH
Q 017021          204 RMPKSSAIKVIDFGSTTYERPDQN-----YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  277 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~  277 (379)
                          +..++|+|||.+........     ...++..|+|||++.+..++.++|||||||++|+|++ |+.||........
T Consensus       248 ----~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~  323 (374)
T cd05106         248 ----GRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK  323 (374)
T ss_pred             ----CCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH
Confidence                44566777776653322211     1234567999999988889999999999999999997 9999976433222


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...........                     .                          .....+.++.++|.+||+.||
T Consensus       324 ~~~~~~~~~~~---------------------~--------------------------~~~~~~~~l~~li~~cl~~dp  356 (374)
T cd05106         324 FYKMVKRGYQM---------------------S--------------------------RPDFAPPEIYSIMKMCWNLEP  356 (374)
T ss_pred             HHHHHHcccCc---------------------c--------------------------CCCCCCHHHHHHHHHHcCCCh
Confidence            11111100000                     0                          001245789999999999999


Q ss_pred             CCCcCHHHHhc
Q 017021          358 TDRLTAREALR  368 (379)
Q Consensus       358 ~~Rpta~e~l~  368 (379)
                      ++|||+.++++
T Consensus       357 ~~RPs~~~l~~  367 (374)
T cd05106         357 TERPTFSQISQ  367 (374)
T ss_pred             hhCcCHHHHHH
Confidence            99999999975

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=1.1e-38  Score=292.63  Aligned_cols=256  Identities=28%  Similarity=0.440  Sum_probs=205.6

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ....|++...||+|++|.||++.+..++..||+|++.........+..|++.+..+     .|+|++++++.+..+...|
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   91 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDC-----KHPNIVDYYDSYLVGDELW   91 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHC-----CCCCeeEEEEEEEECCEEE
Confidence            45568888999999999999999998899999999986544455677788888877     6789999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +++||+ +++|.+++.... ..++...+..++.|++.||.|||+.|++|+|++|+||+++                    
T Consensus        92 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~--------------------  150 (286)
T cd06614          92 VVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS--------------------  150 (286)
T ss_pred             EEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc--------------------
Confidence            999999 799999998754 3589999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                             .++.++|+|||.+......   .....++..|+|||.+.+..++.++|+|||||++|+|++|+.||...+...
T Consensus       151 -------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~  223 (286)
T cd06614         151 -------KDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR  223 (286)
T ss_pred             -------CCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                   4455666777655432221   123357788999999988889999999999999999999999997655443


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+...  ..+.                    ..                        ....++..+.++|++||+.+
T Consensus       224 ~~~~~~~~--~~~~--------------------~~------------------------~~~~~~~~l~~li~~~l~~~  257 (286)
T cd06614         224 ALFLITTK--GIPP--------------------LK------------------------NPEKWSPEFKDFLNKCLVKD  257 (286)
T ss_pred             HHHHHHhc--CCCC--------------------Cc------------------------chhhCCHHHHHHHHHHhccC
Confidence            33222111  0000                    00                        00124567899999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~  375 (379)
                      |.+|||+.++++||||+..
T Consensus       258 p~~Rpt~~~il~~~~~~~~  276 (286)
T cd06614         258 PEKRPSAEELLQHPFLKKA  276 (286)
T ss_pred             hhhCcCHHHHhhChHhhcc
Confidence            9999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=6.4e-39  Score=290.15  Aligned_cols=247  Identities=23%  Similarity=0.327  Sum_probs=197.3

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch-hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      +...|++.++||.|+||.||+|.++. ++.+|+|++..... ....+..|+.++..+     .|++++++++++......
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~   77 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRL-----RHKHLISLFAVCSVGEPV   77 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcC-----CCcchhheeeeEecCCCe
Confidence            34568999999999999999999887 88899999875443 345566788887777     679999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      +++|||+ +++|.+++.......++...+..++.||+.||.|||+.|++||||+|+||+++.                  
T Consensus        78 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~------------------  139 (261)
T cd05148          78 YIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGE------------------  139 (261)
T ss_pred             EEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcC------------------
Confidence            9999999 889999998765557899999999999999999999999999999999999954                  


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCch
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  274 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~  274 (379)
                               +..++|+|||.+.......   ....++..|+|||.+.+..++.++|+||||+++|+|++ |+.||...+.
T Consensus       140 ---------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~  210 (261)
T cd05148         140 ---------DLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN  210 (261)
T ss_pred             ---------CceEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH
Confidence                     4456666666654332211   11234567999999988889999999999999999998 8999987665


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .+....+...... +                                               .....+..+.++|.+||+
T Consensus       211 ~~~~~~~~~~~~~-~-----------------------------------------------~~~~~~~~~~~~i~~~l~  242 (261)
T cd05148         211 HEVYDQITAGYRM-P-----------------------------------------------CPAKCPQEIYKIMLECWA  242 (261)
T ss_pred             HHHHHHHHhCCcC-C-----------------------------------------------CCCCCCHHHHHHHHHHcC
Confidence            4444433321110 0                                               012356789999999999


Q ss_pred             cCCCCCcCHHHHhc
Q 017021          355 YDPTDRLTAREALR  368 (379)
Q Consensus       355 ~dP~~Rpta~e~l~  368 (379)
                      .||++|||++++++
T Consensus       243 ~~p~~Rpt~~~l~~  256 (261)
T cd05148         243 AEPEDRPSFKALRE  256 (261)
T ss_pred             CCchhCcCHHHHHH
Confidence            99999999999874

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.2e-38  Score=289.71  Aligned_cols=246  Identities=26%  Similarity=0.400  Sum_probs=191.5

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-  126 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-  126 (379)
                      ..||+|+||.||+|.+..++..||+|.+.... .....+.+|+.++..+     .|++++++++++..++..++++||+ 
T Consensus        14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~   88 (268)
T cd06624          14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYL-----KHRNIVQYLGSDSENGFFKIFMEQVP   88 (268)
T ss_pred             EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhc-----CCCCeeeeeeeeccCCEEEEEEecCC
Confidence            57999999999999999999999999986432 2344667788888877     7799999999999999999999999 


Q ss_pred             CCCHHHHHHhCCCCCC--CHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccccc
Q 017021          127 GSSLYDFLRKNNYRSF--PIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR  204 (379)
Q Consensus       127 ~~sL~~~l~~~~~~~l--~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (379)
                      +++|.+++.... ..+  +...+..++.||+.||.|||+.|++||||||+||+++.                        
T Consensus        89 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~------------------------  143 (268)
T cd06624          89 GGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT------------------------  143 (268)
T ss_pred             CCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC------------------------
Confidence            899999997653 134  78888999999999999999999999999999999942                        


Q ss_pred             CCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCC--CCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHH
Q 017021          205 MPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  279 (379)
Q Consensus       205 ~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~  279 (379)
                        ....++|+|||.+......   .....|+..|+|||.+.+.  .++.++|+||||+++|+|++|..||..........
T Consensus       144 --~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~  221 (268)
T cd06624         144 --YSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM  221 (268)
T ss_pred             --CCCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH
Confidence              2346788888877543221   1234578899999998654  37899999999999999999999996432211110


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                      .........                    .                          ......+.++.+++++||+.+|++
T Consensus       222 ~~~~~~~~~--------------------~--------------------------~~~~~~~~~~~~li~~~l~~~p~~  255 (268)
T cd06624         222 FKVGMFKIH--------------------P--------------------------EIPESLSAEAKNFILRCFEPDPDK  255 (268)
T ss_pred             hhhhhhccC--------------------C--------------------------CCCcccCHHHHHHHHHHcCCCchh
Confidence            000000000                    0                          011235567999999999999999


Q ss_pred             CcCHHHHhcCCCC
Q 017021          360 RLTAREALRHPFF  372 (379)
Q Consensus       360 Rpta~e~l~hp~f  372 (379)
                      |||+.|++.||||
T Consensus       256 Rpt~~~ll~~~~~  268 (268)
T cd06624         256 RASAHDLLQDPFL  268 (268)
T ss_pred             CCCHHHHHhCCCC
Confidence            9999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=9.2e-39  Score=288.45  Aligned_cols=244  Identities=25%  Similarity=0.342  Sum_probs=193.5

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      ..|++.+.||+|+||.||++.++. +..+|+|.+.........+..|+.+++.+     +|++++++++++......+++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~iv   77 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKL-----SHPKLVQLYGVCTQQKPLYIV   77 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHC-----CCCCceeEEEEEccCCCEEEE
Confidence            346778999999999999998765 45799999875555556778899999888     779999999999999999999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      |||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||+|+||+++.                     
T Consensus        78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~---------------------  135 (256)
T cd05114          78 TEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSS---------------------  135 (256)
T ss_pred             EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcC---------------------
Confidence            9999 899999987643 25889999999999999999999999999999999999944                     


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  276 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~  276 (379)
                            +..++|+|||.+.......    ....++..|+|||.+.+..++.++|+||||+++|+|++ |+.||...+..+
T Consensus       136 ------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~  209 (256)
T cd05114         136 ------TGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE  209 (256)
T ss_pred             ------CCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence                  4456666666654322111    11234567999999988889999999999999999999 899998766555


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.+.....                      .                          ....+..+.+++.+||+.|
T Consensus       210 ~~~~i~~~~~~~----------------------~--------------------------~~~~~~~~~~li~~c~~~~  241 (256)
T cd05114         210 VVEMISRGFRLY----------------------R--------------------------PKLASMTVYEVMYSCWHEK  241 (256)
T ss_pred             HHHHHHCCCCCC----------------------C--------------------------CCCCCHHHHHHHHHHccCC
Confidence            444332211100                      0                          0123457899999999999


Q ss_pred             CCCCcCHHHHhc
Q 017021          357 PTDRLTAREALR  368 (379)
Q Consensus       357 P~~Rpta~e~l~  368 (379)
                      |++|||++++++
T Consensus       242 p~~Rps~~~l~~  253 (256)
T cd05114         242 PEGRPTFAELLR  253 (256)
T ss_pred             cccCcCHHHHHH
Confidence            999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=1.8e-38  Score=284.67  Aligned_cols=248  Identities=29%  Similarity=0.496  Sum_probs=203.4

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeeccch-hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  123 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~  123 (379)
                      |.+.+.||+|++|.||++.+..+++.+++|++..... ....+..|+..+..+     .|++++.+.+.+......++++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~l~~   76 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKC-----KHPNIVKYYGSYLKKDELWIVM   76 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhC-----CCCCEeEEEEEEecCCeEEEEE
Confidence            6777999999999999999998999999999975432 456677788888887     5789999999999999999999


Q ss_pred             eCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          124 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       124 e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      ||+ +++|.+++.... ..+++..+..++.|++.||.+||+.|++||||+|+||++                        
T Consensus        77 e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i------------------------  131 (253)
T cd05122          77 EFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILL------------------------  131 (253)
T ss_pred             ecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEE------------------------
Confidence            999 799999987753 368999999999999999999999999999999999999                        


Q ss_pred             ccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          203 KRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                         +.++.++|+|||.+.......  ....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+..+....
T Consensus       132 ---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~  208 (253)
T cd05122         132 ---TSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK  208 (253)
T ss_pred             ---ccCCeEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH
Confidence               455678888888876555443  445688899999999888889999999999999999999999986544333222


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      ...  ...+.                    .+.                        ...++..+.++|.+||+.||++|
T Consensus       209 ~~~--~~~~~--------------------~~~------------------------~~~~~~~~~~~i~~~l~~~p~~R  242 (253)
T cd05122         209 IAT--NGPPG--------------------LRN------------------------PEKWSDEFKDFLKKCLQKNPEKR  242 (253)
T ss_pred             HHh--cCCCC--------------------cCc------------------------ccccCHHHHHHHHHHccCChhhC
Confidence            211  00000                    000                        00135689999999999999999


Q ss_pred             cCHHHHhcCCC
Q 017021          361 LTAREALRHPF  371 (379)
Q Consensus       361 pta~e~l~hp~  371 (379)
                      ||+.|+++|||
T Consensus       243 ~t~~~~l~~~~  253 (253)
T cd05122         243 PTAEQLLKHPF  253 (253)
T ss_pred             CCHHHHhcCCC
Confidence            99999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=3.6e-38  Score=293.75  Aligned_cols=255  Identities=25%  Similarity=0.374  Sum_probs=202.0

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      ....|+..+.||+|+||.||++++..++..||+|.+....    .....+..|+.++..+     .|++++.+++++..+
T Consensus        23 ~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~   97 (317)
T cd06635          23 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-----KHPNSIEYKGCYLRE   97 (317)
T ss_pred             chhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-----CCCCEEEEEEEEeeC
Confidence            3455788899999999999999999999999999986432    2233566788888777     779999999999999


Q ss_pred             ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          117 NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       117 ~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ...++||||+.++|.+.+.... ..+++..+..++.|++.||.|||+.|++||||+|+||++                  
T Consensus        98 ~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~------------------  158 (317)
T cd06635          98 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL------------------  158 (317)
T ss_pred             CeEEEEEeCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEE------------------
Confidence            9999999999778888876543 358999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhh---CCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                               +.++.++|+|||.+..... .....|+..|+|||.+.   ...++.++|+|||||++|+|++|..||...+
T Consensus       159 ---------~~~~~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~  228 (317)
T cd06635         159 ---------TEPGQVKLADFGSASIASP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  228 (317)
T ss_pred             ---------CCCCCEEEecCCCccccCC-cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc
Confidence                     4455677788877654332 22346788999999974   3457899999999999999999999997655


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.....+...                                               ...++..+.++|.+||
T Consensus       229 ~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~l~~li~~~l  261 (317)
T cd06635         229 AMSALYHIAQNESPTLQ-----------------------------------------------SNEWSDYFRNFVDSCL  261 (317)
T ss_pred             HHHHHHHHHhccCCCCC-----------------------------------------------CccccHHHHHHHHHHc
Confidence            44433332221111000                                               0124567899999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +.+|.+||++.++++|||+....
T Consensus       262 ~~~p~~Rpt~~~il~~~~~~~~~  284 (317)
T cd06635         262 QKIPQDRPTSEELLKHMFVLRER  284 (317)
T ss_pred             cCCcccCcCHHHHHhChhhhccC
Confidence            99999999999999999987654

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=1.1e-38  Score=288.14  Aligned_cols=245  Identities=22%  Similarity=0.322  Sum_probs=193.4

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      ..|++.+.||+|+||.||++.+.. +..+|+|.+.........+..|+..+..+     +|++++++++++......+++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv   77 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKL-----SHEKLVQLYGVCTKQRPIYIV   77 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcC-----CCCCeeeEEEEEccCCCcEEE
Confidence            457888999999999999998754 44599999875544456677888888887     789999999999988899999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      |||+ +++|.+++..... .+++..+..++.||+.||.|||+.|++|+||||+||+++                      
T Consensus        78 ~e~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~----------------------  134 (256)
T cd05113          78 TEYMSNGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVD----------------------  134 (256)
T ss_pred             EEcCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc----------------------
Confidence            9999 8899999976542 589999999999999999999999999999999999994                      


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  276 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~  276 (379)
                           .++.++|+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+
T Consensus       135 -----~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~  209 (256)
T cd05113         135 -----DQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE  209 (256)
T ss_pred             -----CCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence                 44456666666654322211    11234567999999988889999999999999999998 999997655544


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.+......                                                ....+..+.+++.+||+.|
T Consensus       210 ~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~li~~cl~~~  241 (256)
T cd05113         210 TVEKVSQGLRLYR------------------------------------------------PHLASEKVYAIMYSCWHEK  241 (256)
T ss_pred             HHHHHhcCCCCCC------------------------------------------------CCCCCHHHHHHHHHHcCCC
Confidence            3333222111100                                                0124568999999999999


Q ss_pred             CCCCcCHHHHhcC
Q 017021          357 PTDRLTAREALRH  369 (379)
Q Consensus       357 P~~Rpta~e~l~h  369 (379)
                      |.+|||+.+++++
T Consensus       242 p~~Rp~~~~ll~~  254 (256)
T cd05113         242 AEERPTFQQLLSS  254 (256)
T ss_pred             cccCCCHHHHHHh
Confidence            9999999999865

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-38  Score=288.86  Aligned_cols=248  Identities=24%  Similarity=0.331  Sum_probs=197.2

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      +....|++.+.||+|++|.||+|.+.. ++.||+|.++........+.+|+.++.++     .|++++++++++...+..
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   76 (261)
T cd05068           3 IDRTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMDPKDFLAEAQIMKKL-----RHPKLIQLYAVCTLEEPI   76 (261)
T ss_pred             cchhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcccHHHHHHHHHHHHHC-----CCCCccceeEEEecCCCe
Confidence            345568889999999999999998754 56799999975554456677888888888     679999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      +++|||+ +++|.+++.......+++..+..++.|++.||.+||+.|++||||||+||+++                   
T Consensus        77 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~-------------------  137 (261)
T cd05068          77 YIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG-------------------  137 (261)
T ss_pred             eeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc-------------------
Confidence            9999999 99999999775545689999999999999999999999999999999999994                   


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC-Ccc---cccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCc
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYI---VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  273 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-~~~---~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~  273 (379)
                              .++.++|+|||.+....... ...   ..+..|+|||.+.+..++.++|+||||+++|+|++ |+.||.+.+
T Consensus       138 --------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~  209 (261)
T cd05068         138 --------ENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT  209 (261)
T ss_pred             --------CCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC
Confidence                    44556777777665433221 111   12357999999988889999999999999999999 999998765


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      .......+.+.... +                     .                          ....+..+.+++.+||
T Consensus       210 ~~~~~~~~~~~~~~-~---------------------~--------------------------~~~~~~~~~~li~~~l  241 (261)
T cd05068         210 NAEVLQQVDQGYRM-P---------------------C--------------------------PPGCPKELYDIMLDCW  241 (261)
T ss_pred             HHHHHHHHHcCCCC-C---------------------C--------------------------CCcCCHHHHHHHHHHh
Confidence            54443333221100 0                     0                          0124568999999999


Q ss_pred             ccCCCCCcCHHHHhc
Q 017021          354 RYDPTDRLTAREALR  368 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~  368 (379)
                      +.||++||+++++++
T Consensus       242 ~~~P~~Rp~~~~l~~  256 (261)
T cd05068         242 KEDPDDRPTFETLQW  256 (261)
T ss_pred             hcCcccCCCHHHHHH
Confidence            999999999999874

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=1.4e-38  Score=286.62  Aligned_cols=248  Identities=27%  Similarity=0.507  Sum_probs=201.6

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.+.||.|++|.||++.+..+++.||+|++....   .....+..|++++..+     .|++++.+.+.+......+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~~~~~~~~~~~~~~~~   75 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL-----NHPNIIKYYESFEEKGKLC   75 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhc-----CCCChhheEEEEecCCEEE
Confidence            4778899999999999999999999999999997432   3445667788888877     5789999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNN--YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      +++|++ +++|.+.+....  ...+++..+..++.+++.||.+||+.|++|+||+|+||+++                  
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~------------------  137 (258)
T cd08215          76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT------------------  137 (258)
T ss_pred             EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEc------------------
Confidence            999999 889999997742  24689999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                               .+..++|+|||.+.......   ....|++.|+|||...+..++.++|+||+|+++++|++|+.||...+.
T Consensus       138 ---------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~  208 (258)
T cd08215         138 ---------SNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL  208 (258)
T ss_pred             ---------CCCcEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH
Confidence                     44556777777665433321   234678899999999888899999999999999999999999976554


Q ss_pred             HHHHHHHHHHc-CCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          275 LEHLAMMERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       275 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      .+......+.. .+.                                                 ....+..+.+++++||
T Consensus       209 ~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~i~~~l  239 (258)
T cd08215         209 LELALKILKGQYPPI-------------------------------------------------PSQYSSELRNLVSSLL  239 (258)
T ss_pred             HHHHHHHhcCCCCCC-------------------------------------------------CCCCCHHHHHHHHHHc
Confidence            33332221110 000                                                 1135678999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCC
Q 017021          354 RYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f  372 (379)
                      ..||++|||+.++++||||
T Consensus       240 ~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         240 QKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             CCChhhCcCHHHHhcCCCC
Confidence            9999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=9.5e-40  Score=307.85  Aligned_cols=258  Identities=22%  Similarity=0.363  Sum_probs=211.5

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEee-----ccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-----GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~-----~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      ....+..-+...+||+|+|-+||+|.|..+|..||.-.++     .......++..|+..|..|     .|+||++++++
T Consensus        35 ~~p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL-----~H~NIirfy~S  109 (632)
T KOG0584|consen   35 KDPTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL-----KHPNIIRFYDS  109 (632)
T ss_pred             cCCCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC-----CCCceeeeeeh
Confidence            3444455567789999999999999999999999987765     2344457888999999998     88999999999


Q ss_pred             eeecc--eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecccccccC
Q 017021          113 FDYRN--HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVP  187 (379)
Q Consensus       113 ~~~~~--~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--iiH~dlkp~Nili~~~~~~~~~  187 (379)
                      |.+..  .+.+|+|++ .|+|..+..+.+  .+....+..|+.||+.||.|||++.  |+|||||.+||++.        
T Consensus       110 W~d~~n~~in~iTEL~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--------  179 (632)
T KOG0584|consen  110 WVDTDNKTINFITELFTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--------  179 (632)
T ss_pred             eecCCCceeeeeeecccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--------
Confidence            98765  489999999 999999998876  6999999999999999999999875  99999999999994        


Q ss_pred             CCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCC
Q 017021          188 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~  266 (379)
                                        ...+.+||.|+|+|....... .+..|||.|||||... ..|+..+||||||.++.||+|+.
T Consensus       180 ------------------G~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~e  240 (632)
T KOG0584|consen  180 ------------------GNLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSE  240 (632)
T ss_pred             ------------------CCcCceeecchhHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhcc
Confidence                              344779999999987655543 4468999999999987 58999999999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      +||.-.......  ..++.+..++..+.                                            .-..++++
T Consensus       241 YPYsEC~n~AQI--YKKV~SGiKP~sl~--------------------------------------------kV~dPevr  274 (632)
T KOG0584|consen  241 YPYSECTNPAQI--YKKVTSGIKPAALS--------------------------------------------KVKDPEVR  274 (632)
T ss_pred             CChhhhCCHHHH--HHHHHcCCCHHHhh--------------------------------------------ccCCHHHH
Confidence            999765543222  23333333222221                                            12346899


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +||.+||.. .+.|+||.|+|.||||..+.
T Consensus       275 ~fIekCl~~-~~~R~sa~eLL~d~Ff~~d~  303 (632)
T KOG0584|consen  275 EFIEKCLAT-KSERLSAKELLKDPFFDEDG  303 (632)
T ss_pred             HHHHHHhcC-chhccCHHHHhhChhhcccc
Confidence            999999999 99999999999999999873

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-38  Score=284.59  Aligned_cols=247  Identities=29%  Similarity=0.444  Sum_probs=201.4

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.+.||+|++|.||++.+..+++.||+|.+....   .....+..|++.+.++     .|++++.+.+++...+..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL-----KHPNIVKYIGSIETSDSLY   75 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhC-----CCCCccEEEEEEEeCCEEE
Confidence            4778899999999999999999999999999997543   2445667788888777     6788999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      ++||++ +++|.+++....  .+++..+..++.|++.||.+||+.|++||||+|+||++                     
T Consensus        76 ~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i---------------------  132 (254)
T cd06627          76 IILEYAENGSLRQIIKKFG--PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT---------------------  132 (254)
T ss_pred             EEEecCCCCcHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---------------------
Confidence            999999 889999998764  68999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            +.++.++|+|||.+.......   ....++..|+|||...+..++.++|+||||+++|+|++|..||...+...
T Consensus       133 ------~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~  206 (254)
T cd06627         133 ------TKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA  206 (254)
T ss_pred             ------CCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence                  445567777777776443332   23467889999999988778899999999999999999999997655433


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      .......  ..                    ...                          .....+..+.+++.+||+.|
T Consensus       207 ~~~~~~~--~~--------------------~~~--------------------------~~~~~~~~~~~~i~~~l~~~  238 (254)
T cd06627         207 ALFRIVQ--DD--------------------HPP--------------------------LPEGISPELKDFLMQCFQKD  238 (254)
T ss_pred             HHHHHhc--cC--------------------CCC--------------------------CCCCCCHHHHHHHHHHHhCC
Confidence            2221111  00                    000                          11234578999999999999


Q ss_pred             CCCCcCHHHHhcCCCC
Q 017021          357 PTDRLTAREALRHPFF  372 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f  372 (379)
                      |++|||+.|++.||||
T Consensus       239 p~~R~~~~~~l~~~~~  254 (254)
T cd06627         239 PNLRPTAKQLLKHPWI  254 (254)
T ss_pred             hhhCcCHHHHhcCCCC
Confidence            9999999999999998

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=1.5e-38  Score=292.96  Aligned_cols=251  Identities=26%  Similarity=0.441  Sum_probs=198.4

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      .|.-..+||+|+||.||++.++.+++.||+|++.... .....+..|+.++..+     .|++++++++.+..++..+++
T Consensus        21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv   95 (292)
T cd06657          21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-----QHENVVEMYNSYLVGDELWVV   95 (292)
T ss_pred             HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhc-----CCcchhheeeEEEeCCEEEEE
Confidence            3444578999999999999999999999999986322 2344566788877777     678999999999999999999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      |||+ +++|.+++...   .+++..+..++.|++.||+|||+.|++||||+|+||+++                      
T Consensus        96 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~----------------------  150 (292)
T cd06657          96 MEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT----------------------  150 (292)
T ss_pred             EecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC----------------------
Confidence            9999 88999887543   488999999999999999999999999999999999994                      


Q ss_pred             cccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  278 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~  278 (379)
                           .++.++|+|||.+......   .....|+..|+|||.+.+..++.++|+||+|+++|+|++|..||.+....+..
T Consensus       151 -----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~  225 (292)
T cd06657         151 -----HDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM  225 (292)
T ss_pred             -----CCCCEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                 4455677777765432211   12346788999999998888899999999999999999999999876554433


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCC
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  358 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  358 (379)
                      ..+........                                              ......+..+.+++.+||+.||.
T Consensus       226 ~~~~~~~~~~~----------------------------------------------~~~~~~~~~l~~li~~~l~~~P~  259 (292)
T cd06657         226 KMIRDNLPPKL----------------------------------------------KNLHKVSPSLKGFLDRLLVRDPA  259 (292)
T ss_pred             HHHHhhCCccc----------------------------------------------CCcccCCHHHHHHHHHHHhCCcc
Confidence            32222111000                                              00112456788999999999999


Q ss_pred             CCcCHHHHhcCCCCCCC
Q 017021          359 DRLTAREALRHPFFTRD  375 (379)
Q Consensus       359 ~Rpta~e~l~hp~f~~~  375 (379)
                      +||++.++++||||...
T Consensus       260 ~R~~~~~ll~~~~~~~~  276 (292)
T cd06657         260 QRATAAELLKHPFLAKA  276 (292)
T ss_pred             cCcCHHHHhcChHHhcc
Confidence            99999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-38  Score=286.65  Aligned_cols=246  Identities=22%  Similarity=0.307  Sum_probs=194.5

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ...|++.+.||+|+||.||++.++ ++..+|+|++.........+..|+.++..+     .|++++++++++...+..|+
T Consensus         3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~l   76 (256)
T cd05059           3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKL-----SHPNLVQLYGVCTKQRPIFI   76 (256)
T ss_pred             hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhC-----CCCCEEEEEEEEcCCCceEE
Confidence            345788999999999999999876 466799999875544455677888888887     67999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      ||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++                     
T Consensus        77 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~---------------------  134 (256)
T cd05059          77 VTEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVG---------------------  134 (256)
T ss_pred             EEecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEEC---------------------
Confidence            99999 899999997654 2589999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCCC----cccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQN----YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  275 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~  275 (379)
                            .++.++|+|||.+........    ...++..|+|||.+.+..++.++|+||||+++|++++ |..||...+..
T Consensus       135 ------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~  208 (256)
T cd05059         135 ------EDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS  208 (256)
T ss_pred             ------CCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH
Confidence                  445567777776653322111    1123457999999988889999999999999999998 89999765554


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+......                      .                          .....+.++.+++.+||..
T Consensus       209 ~~~~~~~~~~~~----------------------~--------------------------~~~~~~~~~~~li~~cl~~  240 (256)
T cd05059         209 EVVESVSAGYRL----------------------Y--------------------------RPKLAPTEVYTIMYSCWHE  240 (256)
T ss_pred             HHHHHHHcCCcC----------------------C--------------------------CCCCCCHHHHHHHHHHhcC
Confidence            433322211100                      0                          0123567899999999999


Q ss_pred             CCCCCcCHHHHhcC
Q 017021          356 DPTDRLTAREALRH  369 (379)
Q Consensus       356 dP~~Rpta~e~l~h  369 (379)
                      +|++|||+.|+++.
T Consensus       241 ~p~~Rpt~~~~l~~  254 (256)
T cd05059         241 KPEDRPAFKKLLSQ  254 (256)
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=2.7e-38  Score=286.11  Aligned_cols=244  Identities=25%  Similarity=0.340  Sum_probs=192.3

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ...|++.++||+|+||.||+|.+. ++..+|+|.+.........+..|+.++.++     .|++++++++++. ....++
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l-----~~~~i~~~~~~~~-~~~~~l   77 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKL-----RHDKLVQLYAVVS-EEPIYI   77 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhc-----CCCceEEEEeEEC-CCCcEE
Confidence            456899999999999999999865 456799999986555556778899998888     6789999998875 456899


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +|||+ +++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||+++.                    
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~--------------------  137 (260)
T cd05070          78 VTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGD--------------------  137 (260)
T ss_pred             EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeC--------------------
Confidence            99999 899999997755456899999999999999999999999999999999999954                    


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  275 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~  275 (379)
                             +..++|+|||.+.......    ....++..|+|||.+.+..++.++|+||||+++|+|++ |..||...+..
T Consensus       138 -------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~  210 (260)
T cd05070         138 -------GLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR  210 (260)
T ss_pred             -------CceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH
Confidence                   4456666666664332221    11234567999999988889999999999999999999 89999776554


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+......                      +                          .....+..+.+++.+||+.
T Consensus       211 ~~~~~~~~~~~~----------------------~--------------------------~~~~~~~~~~~li~~~l~~  242 (260)
T cd05070         211 EVLEQVERGYRM----------------------P--------------------------CPQDCPISLHELMLQCWKK  242 (260)
T ss_pred             HHHHHHHcCCCC----------------------C--------------------------CCCcCCHHHHHHHHHHccc
Confidence            443332211000                      0                          0123456899999999999


Q ss_pred             CCCCCcCHHHHh
Q 017021          356 DPTDRLTAREAL  367 (379)
Q Consensus       356 dP~~Rpta~e~l  367 (379)
                      ||++|||+++++
T Consensus       243 ~p~~Rpt~~~l~  254 (260)
T cd05070         243 DPEERPTFEYLQ  254 (260)
T ss_pred             CcccCcCHHHHH
Confidence            999999999987

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=2.2e-38  Score=286.69  Aligned_cols=247  Identities=26%  Similarity=0.350  Sum_probs=196.0

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      +....|++.++||+|+||.||+|.++ +++.||+|.+.........+..|+.++..+     +|++++++++++. .+..
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~-~~~~   75 (260)
T cd05067           3 VPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQL-----QHPRLVRLYAVVT-QEPI   75 (260)
T ss_pred             cchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhc-----CCcCeeeEEEEEc-cCCc
Confidence            45667899999999999999999865 467899999986555566778899988888     6789999998764 4568


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      +++|||+ +++|.+++.......++...+..++.|++.||+|||+.|++||||||+||+++                   
T Consensus        76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~-------------------  136 (260)
T cd05067          76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS-------------------  136 (260)
T ss_pred             EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc-------------------
Confidence            9999999 89999998776555789999999999999999999999999999999999994                   


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCc
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  273 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~  273 (379)
                              .+..++|+|||.+.......    ....++..|+|||.+....++.++|+||||+++|++++ |+.||...+
T Consensus       137 --------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~  208 (260)
T cd05067         137 --------ETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT  208 (260)
T ss_pred             --------CCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence                    44556777777665433211    12235678999999988888999999999999999998 999998765


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.+.....                                                .....+.++.+++.+||
T Consensus       209 ~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~li~~~l  240 (260)
T cd05067         209 NPEVIQNLERGYRMP------------------------------------------------RPDNCPEELYELMRLCW  240 (260)
T ss_pred             hHHHHHHHHcCCCCC------------------------------------------------CCCCCCHHHHHHHHHHc
Confidence            544433322211100                                                01124568999999999


Q ss_pred             ccCCCCCcCHHHHhc
Q 017021          354 RYDPTDRLTAREALR  368 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~  368 (379)
                      +.||++|||++++++
T Consensus       241 ~~~p~~Rp~~~~l~~  255 (260)
T cd05067         241 KEKPEERPTFEYLRS  255 (260)
T ss_pred             cCChhhCCCHHHHHH
Confidence            999999999999874

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=2.9e-38  Score=284.51  Aligned_cols=248  Identities=29%  Similarity=0.450  Sum_probs=201.2

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec--ceE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--NHI  119 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~--~~~  119 (379)
                      |++.+.||+|++|.||+|.+..+++.|++|++....   .....+..|+..++++     .|++++.+++.+...  ...
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~   76 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSL-----QHPNIVRYYGSERDEEKNTL   76 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHc-----CCCCEeeEEEEEecCCCCeE
Confidence            677799999999999999999999999999987543   3456677788888888     689999999999888  899


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      ++++|++ +++|.+++.+..  .+++..+..++.|++.||.|||+.|++|+|++|+||++                    
T Consensus        77 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i--------------------  134 (260)
T cd06606          77 NIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILV--------------------  134 (260)
T ss_pred             EEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE--------------------
Confidence            9999999 999999998765  68999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                             ..++.++|+|||.+......     .....++..|.|||.+.+..++.++|+||||+++|+|++|..||....
T Consensus       135 -------~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  207 (260)
T cd06606         135 -------DSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG  207 (260)
T ss_pred             -------cCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                   44566777777776544333     233467889999999988888999999999999999999999997654


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ....  .+......                  ....                          ......+..+.++|.+||
T Consensus       208 ~~~~--~~~~~~~~------------------~~~~--------------------------~~~~~~~~~l~~~i~~~l  241 (260)
T cd06606         208 NPMA--ALYKIGSS------------------GEPP--------------------------EIPEHLSEEAKDFLRKCL  241 (260)
T ss_pred             chHH--HHHhcccc------------------CCCc--------------------------CCCcccCHHHHHHHHHhC
Confidence            1111  11110000                  0000                          011234678999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCC
Q 017021          354 RYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f  372 (379)
                      +.||++||++.|++.||||
T Consensus       242 ~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         242 RRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             cCChhhCCCHHHHhhCCCC
Confidence            9999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=1.9e-38  Score=287.57  Aligned_cols=246  Identities=26%  Similarity=0.348  Sum_probs=191.6

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ....|++.++||+|+||.||+|.+..++ .||+|+++........+..|++++..+     +|++++++++.+. ....+
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~~~~~~~E~~~l~~l-----~~~~i~~~~~~~~-~~~~~   76 (262)
T cd05071           4 PRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEKLVQLYAVVS-EEPIY   76 (262)
T ss_pred             ChHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccCHHHHHHHHHHHHhC-----CCCCcceEEEEEC-CCCcE
Confidence            4456899999999999999999887654 599999985444455677888888887     6789999988774 45689


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|.+++.......+++..+..++.|++.||+|||+.|++||||||+||+++                    
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~--------------------  136 (262)
T cd05071          77 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG--------------------  136 (262)
T ss_pred             EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc--------------------
Confidence            999999 88999999875444688999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCch
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  274 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~  274 (379)
                             .++.++|+|||.+.......    ....++..|+|||...+..++.++|+|||||++|+|++ |..||.....
T Consensus       137 -------~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~  209 (262)
T cd05071         137 -------ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN  209 (262)
T ss_pred             -------CCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh
Confidence                   44556777777665432221    12235667999999988889999999999999999999 8889976554


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .+....+.... ..+                                               .....+..+.+++.+||+
T Consensus       210 ~~~~~~~~~~~-~~~-----------------------------------------------~~~~~~~~l~~li~~~l~  241 (262)
T cd05071         210 REVLDQVERGY-RMP-----------------------------------------------CPPECPESLHDLMCQCWR  241 (262)
T ss_pred             HHHHHHHhcCC-CCC-----------------------------------------------CccccCHHHHHHHHHHcc
Confidence            43332221100 000                                               011245678999999999


Q ss_pred             cCCCCCcCHHHHhc
Q 017021          355 YDPTDRLTAREALR  368 (379)
Q Consensus       355 ~dP~~Rpta~e~l~  368 (379)
                      .||++|||++++++
T Consensus       242 ~~p~~Rp~~~~~~~  255 (262)
T cd05071         242 KEPEERPTFEYLQA  255 (262)
T ss_pred             CCcccCCCHHHHHH
Confidence            99999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.3e-39  Score=306.48  Aligned_cols=257  Identities=25%  Similarity=0.360  Sum_probs=217.9

Q ss_pred             eeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           37 YIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        37 ~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      .....-..|.|.+.||+|.|+.|.+|++..|+..||||++.+.   ........+|++++..+     .||||++++...
T Consensus        50 ~~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l-----~HPnIvkl~~v~  124 (596)
T KOG0586|consen   50 DDSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSL-----NHPNIVKLFSVI  124 (596)
T ss_pred             cccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhc-----CCcceeeeeeee
Confidence            3344556788999999999999999999999999999999753   23345577899999998     889999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      +....+|+||||+ ++.+.+++.+.+  .+.+..+..++.|++.|++|||+++|+|||||.+|+++              
T Consensus       125 ~t~~~lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL--------------  188 (596)
T KOG0586|consen  125 ETEATLYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL--------------  188 (596)
T ss_pred             eecceeEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc--------------
Confidence            9999999999999 999999999987  67789999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCC-CccchHhHHHHHHHHHhCCCCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWT-YPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlG~il~~l~~g~~pf  269 (379)
                                   +.+..++|+|||++.......  .+.+|++.|.|||+..+.+|. +.+|+||+|+++|.|+.|..||
T Consensus       189 -------------~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPF  255 (596)
T KOG0586|consen  189 -------------DENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPF  255 (596)
T ss_pred             -------------ccccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeeccccc
Confidence                         677779999999987655443  567999999999999998875 9999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      ++.+-.+.....                       -.+++.+|.                          -.+.+..++|
T Consensus       256 DG~~lk~Lr~rv-----------------------l~gk~rIp~--------------------------~ms~dce~lL  286 (596)
T KOG0586|consen  256 DGQNLKELRPRV-----------------------LRGKYRIPF--------------------------YMSCDCEDLL  286 (596)
T ss_pred             CCcccccccchh-----------------------eeeeecccc--------------------------eeechhHHHH
Confidence            986654433221                       112222221                          2567899999


Q ss_pred             hhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          350 QGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +++|..||.+|++.+++..|.|...-+
T Consensus       287 rk~lvl~Pskr~~~dqim~~~W~n~~~  313 (596)
T KOG0586|consen  287 RKFLVLNPSKRGPCDQIMKDRWRNDLL  313 (596)
T ss_pred             HHhhccCccccCCHHHhhhhcccchhh
Confidence            999999999999999999999986543

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=1.9e-38  Score=286.34  Aligned_cols=245  Identities=22%  Similarity=0.300  Sum_probs=193.9

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee-eecceE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF-DYRNHI  119 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~-~~~~~~  119 (379)
                      ....|++.+.||+|+||.||++...  |..||+|.++.. .....+..|+.++..+     .|++++++++++ ..+...
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (256)
T cd05082           4 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-ATAQAFLAEASVMTQL-----RHSNLVQLLGVIVEEKGGL   75 (256)
T ss_pred             cHHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC-chHHHHHHHHHHHHhC-----CCCCeeeEEEEEEcCCCce
Confidence            3456888899999999999999754  778999998743 3355677888888887     678999999865 456679


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      ++++||+ +++|.+++.......+++..+..++.|++.||+|||+.|++||||||+||++                    
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~--------------------  135 (256)
T cd05082          76 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV--------------------  135 (256)
T ss_pred             EEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE--------------------
Confidence            9999999 8899999987654468899999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  277 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~  277 (379)
                             +.++.++|+|||.+...........++..|+|||++.+..++.++|||||||++|+|++ |+.||...+..+.
T Consensus       136 -------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~  208 (256)
T cd05082         136 -------SEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV  208 (256)
T ss_pred             -------cCCCcEEecCCccceeccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                   44556777777776644433333445668999999988889999999999999999997 9999976554333


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.+...+                                                ...+..+..+.+++.+||+.||
T Consensus       209 ~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~li~~~l~~~p  240 (256)
T cd05082         209 VPRVEKGYKM------------------------------------------------DAPDGCPPVVYDVMKQCWHLDA  240 (256)
T ss_pred             HHHHhcCCCC------------------------------------------------CCCCCCCHHHHHHHHHHhcCCh
Confidence            3322211000                                                0012356789999999999999


Q ss_pred             CCCcCHHHHhc
Q 017021          358 TDRLTAREALR  368 (379)
Q Consensus       358 ~~Rpta~e~l~  368 (379)
                      ++|||++++++
T Consensus       241 ~~Rpt~~~l~~  251 (256)
T cd05082         241 ATRPSFLQLRE  251 (256)
T ss_pred             hhCcCHHHHHH
Confidence            99999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=2.1e-38  Score=289.61  Aligned_cols=252  Identities=22%  Similarity=0.289  Sum_probs=197.3

Q ss_pred             chhhhhhhhccccccceeEEEEEecC-----CCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRE-----RKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      ....|++.+.||+|++|.||+|.+..     ++..||+|.+....  .....+..|+.++..+     .|++++++++++
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~   78 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKF-----NHQNIVRLIGVS   78 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEE
Confidence            44568899999999999999999987     78899999986432  2234567788888877     778999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNY-----RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  187 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~  187 (379)
                      .+....++||||+ +++|.+++.....     ..+++..+..++.||+.||+|||+.+++||||||+||+++.++     
T Consensus        79 ~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~-----  153 (277)
T cd05036          79 FERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKG-----  153 (277)
T ss_pred             ccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccC-----
Confidence            8888999999999 9999999976531     2478999999999999999999999999999999999996432     


Q ss_pred             CCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHH
Q 017021          188 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL  262 (379)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l  262 (379)
                                         ....++|+|||.+.......     .....+..|+|||++.+..++.++|||||||++|+|
T Consensus       154 -------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el  214 (277)
T cd05036         154 -------------------PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEI  214 (277)
T ss_pred             -------------------CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHH
Confidence                               23457888888776542211     112234679999999888899999999999999999


Q ss_pred             Hh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccc
Q 017021          263 CT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  341 (379)
Q Consensus       263 ~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (379)
                      ++ |..||...+..+....+....                      ....                          ....
T Consensus       215 ~~~g~~pf~~~~~~~~~~~~~~~~----------------------~~~~--------------------------~~~~  246 (277)
T cd05036         215 FSLGYMPYPGRTNQEVMEFVTGGG----------------------RLDP--------------------------PKGC  246 (277)
T ss_pred             HcCCCCCCCCCCHHHHHHHHHcCC----------------------cCCC--------------------------CCCC
Confidence            97 999998755443332221110                      0000                          1134


Q ss_pred             hhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          342 AGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       342 ~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      +..+.+++++||+.||++|||+.++++|
T Consensus       247 ~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         247 PGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            5688999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.1e-38  Score=284.96  Aligned_cols=246  Identities=22%  Similarity=0.312  Sum_probs=197.7

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      +...|++.+.||.|+||.||+|.+.  |+.||+|.+.........+..|+.++..+     .|++++++++++.+....+
T Consensus         4 ~~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   76 (256)
T cd05039           4 NSKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTL-----RHPNLVQLLGVVLQGNPLY   76 (256)
T ss_pred             ChhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhc-----CCcceeeeEEEEcCCCCeE
Confidence            4557889999999999999999764  78899999986554456777888888887     6789999999999899999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||+++                    
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~--------------------  136 (256)
T cd05039          77 IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS--------------------  136 (256)
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe--------------------
Confidence            999999 78999999876544689999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHL  278 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~  278 (379)
                             .++.++|+|||.+...........++..|+|||.+....++.++|+||||+++|++++ |..||......+..
T Consensus       137 -------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~  209 (256)
T cd05039         137 -------EDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV  209 (256)
T ss_pred             -------CCCCEEEcccccccccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence                   4556777777777654332222334567999999988888999999999999999997 99999765544333


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCC
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  358 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  358 (379)
                      ..+.....                      .                          ...+..++.+.++|++||..||+
T Consensus       210 ~~~~~~~~----------------------~--------------------------~~~~~~~~~~~~li~~~l~~~p~  241 (256)
T cd05039         210 PHVEKGYR----------------------M--------------------------EAPEGCPPEVYKVMKDCWELDPA  241 (256)
T ss_pred             HHHhcCCC----------------------C--------------------------CCccCCCHHHHHHHHHHhccChh
Confidence            22211100                      0                          00123567899999999999999


Q ss_pred             CCcCHHHHhc
Q 017021          359 DRLTAREALR  368 (379)
Q Consensus       359 ~Rpta~e~l~  368 (379)
                      +|||++++++
T Consensus       242 ~Rp~~~~l~~  251 (256)
T cd05039         242 KRPTFKQLRE  251 (256)
T ss_pred             hCcCHHHHHH
Confidence            9999999985

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-39  Score=306.29  Aligned_cols=245  Identities=27%  Similarity=0.418  Sum_probs=200.2

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ...|.+...+|.|+|+.|-.+.+..+++..++|++...   .....+|..++...    .+|+|++...+.+.++.+.|+
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~----~~h~niv~~~~v~~~~~~~~~  393 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLV----RDHPNIVKSHDVYEDGKEIYL  393 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhh----cCCCcceeecceecCCceeee
Confidence            45677888899999999999999999999999999754   22233355555554    377999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      |||++ |+-+.+.+..+.  .+. ..+..|+.+|+.|+.|||++|++|||+||+|||+.                     
T Consensus       394 v~e~l~g~ell~ri~~~~--~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~---------------------  449 (612)
T KOG0603|consen  394 VMELLDGGELLRRIRSKP--EFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD---------------------  449 (612)
T ss_pred             eehhccccHHHHHHHhcc--hhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec---------------------
Confidence            99999 776666666654  233 77888999999999999999999999999999993                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                           ...+.++|||||.+...+....+.+-|..|.|||++....|+.++|+||||+++|+|++|..||......   ..
T Consensus       450 -----~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~e  521 (612)
T KOG0603|consen  450 -----GSAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IE  521 (612)
T ss_pred             -----CCCCcEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch---HH
Confidence                 2456789999999887666644556788999999999999999999999999999999999999875443   11


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      +.+-++.++                                               +....|.++++||++||+.||.+|
T Consensus       522 i~~~i~~~~-----------------------------------------------~s~~vS~~AKdLl~~LL~~dP~~R  554 (612)
T KOG0603|consen  522 IHTRIQMPK-----------------------------------------------FSECVSDEAKDLLQQLLQVDPALR  554 (612)
T ss_pred             HHHhhcCCc-----------------------------------------------cccccCHHHHHHHHHhccCChhhC
Confidence            222222211                                               113578899999999999999999


Q ss_pred             cCHHHHhcCCCC
Q 017021          361 LTAREALRHPFF  372 (379)
Q Consensus       361 pta~e~l~hp~f  372 (379)
                      +++++++.||||
T Consensus       555 l~~~~i~~h~w~  566 (612)
T KOG0603|consen  555 LGADEIGAHPWF  566 (612)
T ss_pred             cChhhhccCcch
Confidence            999999999999

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=4.7e-38  Score=291.80  Aligned_cols=254  Identities=26%  Similarity=0.366  Sum_probs=200.5

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      ....|.+.+.||+|++|.||+|.++.+++.+|+|.+...    ......+..|+.++..+     +|++++.+.+++...
T Consensus        13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~   87 (308)
T cd06634          13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-----RHPNTIQYRGCYLRE   87 (308)
T ss_pred             cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC-----CCCCcccEEEEEEcC
Confidence            455688889999999999999999999999999998632    12234556788888877     678999999999999


Q ss_pred             ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          117 NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       117 ~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ...++||||+.+++.+.+.... ..+++..+..++.|++.||.|||+.|++||||+|+||+++                 
T Consensus        88 ~~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~-----------------  149 (308)
T cd06634          88 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS-----------------  149 (308)
T ss_pred             CeeEEEEEccCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEEC-----------------
Confidence            9999999999778888876543 3589999999999999999999999999999999999994                 


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhh---CCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                .++.++|+|||.+...... ....++..|+|||.+.   ...++.++|||||||++|+|++|..||...+
T Consensus       150 ----------~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~  218 (308)
T cd06634         150 ----------EPGLVKLGDFGSASIMAPA-NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  218 (308)
T ss_pred             ----------CCCcEEECCcccceeecCc-ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc
Confidence                      4456777777776543322 2346788999999975   3457889999999999999999999997654


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.+...+..                                               ....++..+.++|.+||
T Consensus       219 ~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~li~~cl  251 (308)
T cd06634         219 AMSALYHIAQNESPAL-----------------------------------------------QSGHWSEYFRNFVDSCL  251 (308)
T ss_pred             HHHHHHHHhhcCCCCc-----------------------------------------------CcccccHHHHHHHHHHh
Confidence            4333322222111000                                               01135677899999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +.+|++||+++++++|||+...
T Consensus       252 ~~~P~~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         252 QKIPQDRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             hCCcccCCCHHHHhhCcccccc
Confidence            9999999999999999998764

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=2.1e-38  Score=290.47  Aligned_cols=247  Identities=20%  Similarity=0.305  Sum_probs=192.4

Q ss_pred             hhhhhhhccccccceeEEEEEe----cCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           43 FADKIHSKMGEGTFGQVLECWD----RERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~----~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      ..|++.++||+|+||.||+|.+    ..++..||+|.+....  .....+.+|+.++..+     .|+|++++++++..+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~   79 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAEL-----HHPNIVCLLGVVTQE   79 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-----CCCCeeeEEEEEecC
Confidence            3567889999999999999985    3456889999997422  2224566788888887     779999999999999


Q ss_pred             ceEEEEEeCC-CCCHHHHHHhCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEec
Q 017021          117 NHICIVFEKL-GSSLYDFLRKNN---------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  180 (379)
Q Consensus       117 ~~~~lv~e~~-~~sL~~~l~~~~---------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~  180 (379)
                      ...|++|||+ +++|.+++....               ...+++..+..++.|++.||.|||+.|++||||||+||+++ 
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~-  158 (283)
T cd05090          80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG-  158 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc-
Confidence            9999999999 889999985321               12478889999999999999999999999999999999994 


Q ss_pred             ccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhH
Q 017021          181 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSV  255 (379)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSl  255 (379)
                                                .+..++|+|||.+.......     ....++..|+|||.+.+..++.++|+|||
T Consensus       159 --------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl  212 (283)
T cd05090         159 --------------------------EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSF  212 (283)
T ss_pred             --------------------------CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHH
Confidence                                      44556777777765432211     22345667999999988889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHH
Q 017021          256 GCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI  334 (379)
Q Consensus       256 G~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (379)
                      ||++|+|++ |..||.+.+..+....+..... +                     +                        
T Consensus       213 G~il~el~~~g~~p~~~~~~~~~~~~~~~~~~-~---------------------~------------------------  246 (283)
T cd05090         213 GVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQL-L---------------------P------------------------  246 (283)
T ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc-C---------------------C------------------------
Confidence            999999998 9999987655443333222110 0                     0                        


Q ss_pred             HHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       335 ~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                        .....+..+.+++.+||+.||++||++.+++++
T Consensus       247 --~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         247 --CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             --CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence              011345788999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=3e-38  Score=286.76  Aligned_cols=247  Identities=26%  Similarity=0.370  Sum_probs=194.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeec----cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|+||.||+|+++.+++.||+|.++.    .......+..|+.++..+     .|++++++++.+...+..
T Consensus         3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   77 (267)
T cd08228           3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-----NHPNVIKYLDSFIEDNEL   77 (267)
T ss_pred             ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-----CCcceeeeeeeEEECCeE
Confidence            57888999999999999999999999999998753    223334567788888887     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ++++||+ +++|.+++...  ....+++..+..++.|++.||.|||+.|++|+||||+||+++                 
T Consensus        78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~-----------------  140 (267)
T cd08228          78 NIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT-----------------  140 (267)
T ss_pred             EEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc-----------------
Confidence            9999999 88999988642  223578999999999999999999999999999999999994                 


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                .++.++|+|||.+.......   ....|+..|+|||.+.+..++.++|+||+|+++|+|++|..||....
T Consensus       141 ----------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~  210 (267)
T cd08228         141 ----------ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             ----------CCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccc
Confidence                      44557777777665433222   23457889999999988888999999999999999999999996543


Q ss_pred             h--HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          274 N--LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       274 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .  .+....+.. .+.++.                                              .....+..+.++|.+
T Consensus       211 ~~~~~~~~~~~~-~~~~~~----------------------------------------------~~~~~~~~~~~li~~  243 (267)
T cd08228         211 MNLFSLCQKIEQ-CDYPPL----------------------------------------------PTEHYSEKLRELVSM  243 (267)
T ss_pred             ccHHHHHHHHhc-CCCCCC----------------------------------------------ChhhcCHHHHHHHHH
Confidence            2  121111111 011100                                              011245679999999


Q ss_pred             ccccCCCCCcCHHHHhcC
Q 017021          352 LLRYDPTDRLTAREALRH  369 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~h  369 (379)
                      ||+.||++|||+.++++.
T Consensus       244 cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         244 CIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             HCCCCcccCcCHHHHHHH
Confidence            999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=4.4e-38  Score=289.16  Aligned_cols=256  Identities=23%  Similarity=0.330  Sum_probs=195.0

Q ss_pred             chhhhhhhhccccccceeEEEEEecC-----CCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRE-----RKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      ....|++.++||+|+||.||+|.++.     .+..||+|.++...  .....+..|...+..+     +|++++++++.+
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~   78 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF-----TCHHVVRLLGVV   78 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhC-----CCCCeeeEEEEE
Confidence            45678999999999999999997652     35689999986433  2233456677777777     678999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccccc
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNN--------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI  184 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~--------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~  184 (379)
                      .++...|+||||+ +++|.+++....        ...++...+..++.|++.||.|||+.|++||||||+||+++     
T Consensus        79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~-----  153 (288)
T cd05061          79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA-----  153 (288)
T ss_pred             cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc-----
Confidence            9999999999999 899999997532        12346678889999999999999999999999999999994     


Q ss_pred             ccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHH
Q 017021          185 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL  259 (379)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il  259 (379)
                                            .+..++|+|||.++......     ....++..|+|||.+.+..++.++|+|||||++
T Consensus       154 ----------------------~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l  211 (288)
T cd05061         154 ----------------------HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL  211 (288)
T ss_pred             ----------------------CCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHH
Confidence                                  44556777777665322111     112345679999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhh
Q 017021          260 VELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV  338 (379)
Q Consensus       260 ~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (379)
                      |+|++ |..||.+....+....+..  +..                    ...                          .
T Consensus       212 ~el~~~~~~p~~~~~~~~~~~~~~~--~~~--------------------~~~--------------------------~  243 (288)
T cd05061         212 WEITSLAEQPYQGLSNEQVLKFVMD--GGY--------------------LDQ--------------------------P  243 (288)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHc--CCC--------------------CCC--------------------------C
Confidence            99998 7889976544332221111  000                    000                          0


Q ss_pred             ccchhHHHHHHhhccccCCCCCcCHHHHhc------CCCCCCCC
Q 017021          339 DHSAGDLTHLLQGLLRYDPTDRLTAREALR------HPFFTRDH  376 (379)
Q Consensus       339 ~~~~~~~~~li~~~L~~dP~~Rpta~e~l~------hp~f~~~~  376 (379)
                      ...+..+.+++.+||+.||++|||+.++++      ||||.+..
T Consensus       244 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~  287 (288)
T cd05061         244 DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS  287 (288)
T ss_pred             CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCC
Confidence            124568999999999999999999999987      99998753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=2.5e-38  Score=284.86  Aligned_cols=239  Identities=21%  Similarity=0.353  Sum_probs=185.8

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  126 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~  126 (379)
                      +.||+|+||.||+|.++.+++.||+|.+...  ......+.+|+.++..+     .|++++++++++......++||||+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~   75 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQY-----SHPNIVRLIGVCTQKQPIYIVMELV   75 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEcCCCCeEEEEeec
Confidence            4789999999999999999999999987632  23345677888888887     7899999999999999999999999


Q ss_pred             -CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccC
Q 017021          127 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  205 (379)
Q Consensus       127 -~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (379)
                       +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++.++                       
T Consensus        76 ~~~~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~-----------------------  131 (252)
T cd05084          76 QGGDFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKN-----------------------  131 (252)
T ss_pred             cCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCC-----------------------
Confidence             899999987643 3588999999999999999999999999999999999995444                       


Q ss_pred             CCCCCeEEeecCcccccCCCCC-----cccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHHHH
Q 017021          206 PKSSAIKVIDFGSTTYERPDQN-----YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  279 (379)
Q Consensus       206 ~~~~~~~l~Dfg~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~  279 (379)
                          .++|+|||.+........     ....+..|+|||.+.+..++.++|+|||||++|+|++ |..||......+...
T Consensus       132 ----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~  207 (252)
T cd05084         132 ----VLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTRE  207 (252)
T ss_pred             ----cEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHH
Confidence                456666665543221110     1112356999999988889999999999999999997 888886544333222


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                      .+.....                      ..                          .....+..+.+++.+||+.||++
T Consensus       208 ~~~~~~~----------------------~~--------------------------~~~~~~~~~~~li~~~l~~~p~~  239 (252)
T cd05084         208 AIEQGVR----------------------LP--------------------------CPELCPDAVYRLMERCWEYDPGQ  239 (252)
T ss_pred             HHHcCCC----------------------CC--------------------------CcccCCHHHHHHHHHHcCCChhh
Confidence            2211100                      00                          01234678999999999999999


Q ss_pred             CcCHHHHhc
Q 017021          360 RLTAREALR  368 (379)
Q Consensus       360 Rpta~e~l~  368 (379)
                      |||++++++
T Consensus       240 Rps~~~~~~  248 (252)
T cd05084         240 RPSFSTVHQ  248 (252)
T ss_pred             CcCHHHHHH
Confidence            999999974

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=3.3e-38  Score=289.99  Aligned_cols=248  Identities=22%  Similarity=0.330  Sum_probs=193.4

Q ss_pred             chhhhhhhhccccccceeEEEEEec-----CCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      ..-.|.+.+.||+|+||.||++.+.     .++..+|+|.+... ......+..|+.++..+     .|++++++++++.
T Consensus         3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~   77 (288)
T cd05093           3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-----QHEHIVKFYGVCV   77 (288)
T ss_pred             chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEe
Confidence            4456888999999999999999852     34567999998643 23345677888888887     7799999999999


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCC-----------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccc
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNY-----------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE  182 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~-----------~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~  182 (379)
                      ..+..+++|||+ +++|.+++.....           ..+++..+..++.|++.||+|||+.|++||||||+||+++.  
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~--  155 (288)
T cd05093          78 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE--  155 (288)
T ss_pred             cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc--
Confidence            999999999999 8999999975431           24899999999999999999999999999999999999944  


Q ss_pred             ccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHH
Q 017021          183 YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGC  257 (379)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~  257 (379)
                                               ++.++|+|||.+.......     ....++..|+|||.+.+..++.++|+|||||
T Consensus       156 -------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~  210 (288)
T cd05093         156 -------------------------NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGV  210 (288)
T ss_pred             -------------------------CCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHH
Confidence                                     4456666666665332211     1223567899999999888999999999999


Q ss_pred             HHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHH
Q 017021          258 ILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ  336 (379)
Q Consensus       258 il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (379)
                      ++|+|++ |..||......+....+.+.  ..+                    .                          
T Consensus       211 il~~l~t~g~~p~~~~~~~~~~~~i~~~--~~~--------------------~--------------------------  242 (288)
T cd05093         211 VLWEIFTYGKQPWYQLSNNEVIECITQG--RVL--------------------Q--------------------------  242 (288)
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcC--CcC--------------------C--------------------------
Confidence            9999998 99999776554433322211  000                    0                          


Q ss_pred             hhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       337 ~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      .....+.++.+++.+||+.||.+|||+.++++
T Consensus       243 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         243 RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            01235678999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=3.1e-38  Score=296.48  Aligned_cols=252  Identities=21%  Similarity=0.300  Sum_probs=189.9

Q ss_pred             echhhhhhhhccccccceeEEEEEec-----CCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      ++...|++.+.||+|+||.||+|.+.     .+++.||+|+++...  .....+..|+.++.++    .+|+|+++++++
T Consensus         4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l----~~h~niv~~~~~   79 (337)
T cd05054           4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHI----GHHLNVVNLLGA   79 (337)
T ss_pred             cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhh----ccCcchhheeee
Confidence            45568999999999999999999753     345789999987432  2234556688877776    256899999987


Q ss_pred             eee-cceEEEEEeCC-CCCHHHHHHhCCC---------------------------------------------------
Q 017021          113 FDY-RNHICIVFEKL-GSSLYDFLRKNNY---------------------------------------------------  139 (379)
Q Consensus       113 ~~~-~~~~~lv~e~~-~~sL~~~l~~~~~---------------------------------------------------  139 (379)
                      +.. +..+++++||+ +++|.+++.....                                                   
T Consensus        80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (337)
T cd05054          80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED  159 (337)
T ss_pred             EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence            754 46789999999 8999999865321                                                   


Q ss_pred             --------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCe
Q 017021          140 --------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI  211 (379)
Q Consensus       140 --------~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (379)
                              ..+++..+..++.||+.||.|||+.||+||||||+||+++                           .++.+
T Consensus       160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~---------------------------~~~~v  212 (337)
T cd05054         160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS---------------------------ENNVV  212 (337)
T ss_pred             hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe---------------------------CCCcE
Confidence                    2578899999999999999999999999999999999994                           44557


Q ss_pred             EEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHc
Q 017021          212 KVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVL  285 (379)
Q Consensus       212 ~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~  285 (379)
                      +|+|||.+.......     ....++..|+|||.+.+..++.++|||||||++|+|++ |..||......+......+  
T Consensus       213 kL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~--  290 (337)
T cd05054         213 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLK--  290 (337)
T ss_pred             EEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHh--
Confidence            777777775432211     12345678999999999999999999999999999998 9999975433221111000  


Q ss_pred             CCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHH
Q 017021          286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  365 (379)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e  365 (379)
                                          .+...                         ......+.++.+++.+||+.+|++||++.|
T Consensus       291 --------------------~~~~~-------------------------~~~~~~~~~~~~l~~~cl~~~p~~RPs~~e  325 (337)
T cd05054         291 --------------------EGTRM-------------------------RAPEYATPEIYSIMLDCWHNNPEDRPTFSE  325 (337)
T ss_pred             --------------------ccCCC-------------------------CCCccCCHHHHHHHHHHccCChhhCcCHHH
Confidence                                00000                         001134578999999999999999999999


Q ss_pred             HhcC
Q 017021          366 ALRH  369 (379)
Q Consensus       366 ~l~h  369 (379)
                      +++|
T Consensus       326 ll~~  329 (337)
T cd05054         326 LVEI  329 (337)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=3.9e-38  Score=288.55  Aligned_cols=249  Identities=19%  Similarity=0.239  Sum_probs=191.8

Q ss_pred             chhhhhhhhccccccceeEEEEEecC-----CCceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRE-----RKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      ....|++.++||+|+||.||+|.+..     +++.||+|+++....  ....+..|..++..+     .|++++++++++
T Consensus         3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-----~h~~iv~~~~~~   77 (283)
T cd05091           3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRL-----QHPNIVCLLGVV   77 (283)
T ss_pred             CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcC-----CCCCcCeEEEEE
Confidence            34568999999999999999998754     357899999974322  234456677777766     789999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLL  178 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~--------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili  178 (379)
                      ......++++||+ +++|.+++....              ...+++..+..++.|++.||.|||+.|++||||||+||++
T Consensus        78 ~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~  157 (283)
T cd05091          78 TKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLV  157 (283)
T ss_pred             cCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEe
Confidence            9999999999999 899999985321              1247888899999999999999999999999999999999


Q ss_pred             ecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchH
Q 017021          179 VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIW  253 (379)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvw  253 (379)
                      ..                           +..++|+|||.+.......     ....+++.|+|||.+.+..++.++|||
T Consensus       158 ~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  210 (283)
T cd05091         158 FD---------------------------KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIW  210 (283)
T ss_pred             cC---------------------------CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHH
Confidence            44                           4456667777655322211     122456789999999888899999999


Q ss_pred             hHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHH
Q 017021          254 SVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN  332 (379)
Q Consensus       254 SlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (379)
                      ||||++|+|++ |..||.+....+....+.+....                      .                      
T Consensus       211 slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~----------------------~----------------------  246 (283)
T cd05091         211 SYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVL----------------------P----------------------  246 (283)
T ss_pred             HHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC----------------------C----------------------
Confidence            99999999998 88898776554443332221100                      0                      


Q ss_pred             HHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          333 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       333 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                          .....+..+.+++.+||+.||++||+++++++.
T Consensus       247 ----~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         247 ----CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             ----CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence                012356778999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.3e-38  Score=283.96  Aligned_cols=247  Identities=27%  Similarity=0.425  Sum_probs=193.8

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc------chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec-
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI------KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR-  116 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~-  116 (379)
                      .|++.+.||+|+||.||+|.+..+++.||+|++...      ......+..|+.+++++     .|++++.+++.+.+. 
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-----~h~~i~~~~~~~~~~~   77 (264)
T cd06653           3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-----RHDRIVQYYGCLRDPE   77 (264)
T ss_pred             ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-----CCCCcceEEEEEEcCC
Confidence            578889999999999999999999999999997522      12234566788888888     678999999988653 


Q ss_pred             -ceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          117 -NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       117 -~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                       +..++++||+ +++|.+.+....  .+++..+..++.|++.||.|||+.|++|+||+|+||+++.+             
T Consensus        78 ~~~~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~-------------  142 (264)
T cd06653          78 EKKLSIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSA-------------  142 (264)
T ss_pred             CCEEEEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC-------------
Confidence             5689999999 889999987754  58899999999999999999999999999999999999544             


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCC------CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                                    +.++|+|||.+......      .....|+..|+|||.+.+..++.++|+|||||++|+|++|+.|
T Consensus       143 --------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  208 (264)
T cd06653         143 --------------GNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPP  208 (264)
T ss_pred             --------------CCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence                          44566666655432211      1224578899999999888889999999999999999999999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |......+...++   ....+.                                            ...++..+..+.++
T Consensus       209 ~~~~~~~~~~~~~---~~~~~~--------------------------------------------~~~p~~~~~~~~~~  241 (264)
T cd06653         209 WAEYEAMAAIFKI---ATQPTK--------------------------------------------PMLPDGVSDACRDF  241 (264)
T ss_pred             CCccCHHHHHHHH---HcCCCC--------------------------------------------CCCCcccCHHHHHH
Confidence            9765443322211   111100                                            00122466789999


Q ss_pred             HhhccccCCCCCcCHHHHhcCCCC
Q 017021          349 LQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      |++||+ +|.+|||+.+++.|||+
T Consensus       242 i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         242 LKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             HHHHhc-CcccCccHHHHhcCCCC
Confidence            999999 57999999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.2e-38  Score=282.14  Aligned_cols=239  Identities=31%  Similarity=0.552  Sum_probs=196.6

Q ss_pred             cccccceeEEEEEecCCCceEEEEEeeccch----hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC
Q 017021           51 MGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  126 (379)
Q Consensus        51 Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~  126 (379)
                      ||.|+||.||++.+..+++.+|+|++.....    ....+..|+.++..+     .|++++.+++.++.++..+++||++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~~v~e~~   75 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-----NHPFIVKLHYAFQTEEKLYLVLEYA   75 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc-----CCCcHHHHHHHeecCCeeEEEEecC
Confidence            6999999999999998899999999874322    334667788888877     6789999999999999999999999


Q ss_pred             -CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccC
Q 017021          127 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  205 (379)
Q Consensus       127 -~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (379)
                       +++|.+++....  .+++..+..++.|++.||.|||+.+++|+||+|+||++                           
T Consensus        76 ~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~---------------------------  126 (250)
T cd05123          76 PGGELFSHLSKEG--RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILL---------------------------  126 (250)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEE---------------------------
Confidence             999999998764  58999999999999999999999999999999999999                           


Q ss_pred             CCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHH
Q 017021          206 PKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME  282 (379)
Q Consensus       206 ~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~  282 (379)
                      +..+.++|+|||.+......   .....++..|++||...+...+.++|+||||+++|++++|..||...+..+....+.
T Consensus       127 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~  206 (250)
T cd05123         127 DADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKIL  206 (250)
T ss_pred             cCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence            44556788888877654332   234567889999999988888899999999999999999999997655433322222


Q ss_pred             HHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcC
Q 017021          283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  362 (379)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  362 (379)
                      +..                       ..++                          ...+..+.++|++||..||++||+
T Consensus       207 ~~~-----------------------~~~~--------------------------~~~~~~l~~~i~~~l~~~p~~R~~  237 (250)
T cd05123         207 KDP-----------------------LRFP--------------------------EFLSPEARDLISGLLQKDPTKRLG  237 (250)
T ss_pred             cCC-----------------------CCCC--------------------------CCCCHHHHHHHHHHhcCCHhhCCC
Confidence            211                       1111                          123568899999999999999999


Q ss_pred             H---HHHhcCCCC
Q 017021          363 A---REALRHPFF  372 (379)
Q Consensus       363 a---~e~l~hp~f  372 (379)
                      +   +++++||||
T Consensus       238 ~~~~~~l~~~~~f  250 (250)
T cd05123         238 SGGAEEIKAHPFF  250 (250)
T ss_pred             cccHHHHHhCCCC
Confidence            9   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.2e-40  Score=293.83  Aligned_cols=255  Identities=27%  Similarity=0.384  Sum_probs=215.8

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      +....|..+.+||+|+||.|.+|+.+.|.+.+|||+++++    +...+..+.|..+|+--    ...|.++.++..|++
T Consensus       346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~----~kppFL~qlHScFQT  421 (683)
T KOG0696|consen  346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALP----GKPPFLVQLHSCFQT  421 (683)
T ss_pred             eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecC----CCCchHHHHHHHhhh
Confidence            3344456679999999999999999999999999999753    22334445566655443    234678999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      -+++|+||||+ ||+|--.+++-+  .+.+..+..++.+|+-||-|||++||+.||||.+|||+                
T Consensus       422 mDRLyFVMEyvnGGDLMyhiQQ~G--kFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL----------------  483 (683)
T KOG0696|consen  422 MDRLYFVMEYVNGGDLMYHIQQVG--KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML----------------  483 (683)
T ss_pred             hhheeeEEEEecCchhhhHHHHhc--ccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe----------------
Confidence            99999999999 999988888876  68899999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                 +..+.+||+|||+++..-..   ..+.+||+.|+|||++..++|+..+|+||+||++|||+.|.+||.+
T Consensus       484 -----------d~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG  552 (683)
T KOG0696|consen  484 -----------DSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG  552 (683)
T ss_pred             -----------ccCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC
Confidence                       77888999999998743332   3567999999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .++.+.++.|.+.-...|                                                 +..|.++.+++..
T Consensus       553 eDE~elF~aI~ehnvsyP-------------------------------------------------KslSkEAv~ickg  583 (683)
T KOG0696|consen  553 EDEDELFQAIMEHNVSYP-------------------------------------------------KSLSKEAVAICKG  583 (683)
T ss_pred             CCHHHHHHHHHHccCcCc-------------------------------------------------ccccHHHHHHHHH
Confidence            999999988776544433                                                 2467889999999


Q ss_pred             ccccCCCCCcC-----HHHHhcCCCCCCCC
Q 017021          352 LLRYDPTDRLT-----AREALRHPFFTRDH  376 (379)
Q Consensus       352 ~L~~dP~~Rpt-----a~e~l~hp~f~~~~  376 (379)
                      .|...|.+|..     -.++-.||||....
T Consensus       584 ~ltK~P~kRLGcg~~ge~di~~H~FFR~iD  613 (683)
T KOG0696|consen  584 LLTKHPGKRLGCGPEGERDIREHPFFRRID  613 (683)
T ss_pred             HhhcCCccccCCCCccccchhhCcchhhcc
Confidence            99999999984     47899999998753

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=2.4e-38  Score=294.78  Aligned_cols=248  Identities=21%  Similarity=0.259  Sum_probs=191.3

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCce----EEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEM----VAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~----vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      +....|++.+.||+|+||.||+|.+..+++.    ||+|.++..  ......+..|+.++..+     .|+|++++++++
T Consensus         4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~g~~   78 (316)
T cd05108           4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-----DNPHVCRLLGIC   78 (316)
T ss_pred             cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEE
Confidence            4456789999999999999999988766554    899998643  23345667788888877     789999999988


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      ... ..+++++|+ +++|.+++.... ..++...+..++.||+.||+|||+.|++||||||+||+++             
T Consensus        79 ~~~-~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~-------------  143 (316)
T cd05108          79 LTS-TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVK-------------  143 (316)
T ss_pred             cCC-CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEec-------------
Confidence            765 467899999 999999998754 3588899999999999999999999999999999999994             


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCCC-----cccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-----YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GE  266 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~  266 (379)
                                    .+..++|+|||.+........     ...++..|+|||.+.+..++.++|||||||++|+|++ |.
T Consensus       144 --------------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~  209 (316)
T cd05108         144 --------------TPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS  209 (316)
T ss_pred             --------------CCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCC
Confidence                          445567777777654332221     1223567999999998889999999999999999997 99


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||.+....+....+... ..+|                     .                          ...++.++.
T Consensus       210 ~p~~~~~~~~~~~~~~~~-~~~~---------------------~--------------------------~~~~~~~~~  241 (316)
T cd05108         210 KPYDGIPASEISSILEKG-ERLP---------------------Q--------------------------PPICTIDVY  241 (316)
T ss_pred             CCCCCCCHHHHHHHHhCC-CCCC---------------------C--------------------------CCCCCHHHH
Confidence            999765443322211110 0000                     0                          012456788


Q ss_pred             HHHhhccccCCCCCcCHHHHhcC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      +++.+||+.||++|||+.+++.+
T Consensus       242 ~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         242 MIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HHHHHHccCChhhCcCHHHHHHH
Confidence            99999999999999999999975

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=5.8e-38  Score=283.97  Aligned_cols=245  Identities=26%  Similarity=0.356  Sum_probs=192.1

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ...|++.++||+|++|.||+|.+..++ .+|+|++.........+..|+.++..+     .|++++.+++++. .+..++
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~-~~~~~~   77 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTMMPEAFLQEAQIMKKL-----RHDKLVPLYAVVS-EEPIYI   77 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCccHHHHHHHHHHHHhC-----CCCCeeeEEEEEc-CCCcEE
Confidence            456889999999999999999876654 599999875555556677899988887     6788999988775 456899


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +|||+ +++|.+++.......+++..+..++.|++.||.|||+.|++|+||+|+||+++                     
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~---------------------  136 (260)
T cd05069          78 VTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG---------------------  136 (260)
T ss_pred             EEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---------------------
Confidence            99999 78999999875544588999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  275 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~  275 (379)
                            .+..++|+|||.+.......    ....++..|+|||...+..++.++|+||||+++|+|++ |..||.+....
T Consensus       137 ------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~  210 (260)
T cd05069         137 ------DNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR  210 (260)
T ss_pred             ------CCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence                  44556777777665332221    12235667999999988889999999999999999999 99999875554


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+...... +                                               .....+..+.+++++||+.
T Consensus       211 ~~~~~~~~~~~~-~-----------------------------------------------~~~~~~~~~~~li~~~l~~  242 (260)
T cd05069         211 EVLEQVERGYRM-P-----------------------------------------------CPQGCPESLHELMKLCWKK  242 (260)
T ss_pred             HHHHHHHcCCCC-C-----------------------------------------------CCcccCHHHHHHHHHHccC
Confidence            433322221100 0                                               0112456899999999999


Q ss_pred             CCCCCcCHHHHhc
Q 017021          356 DPTDRLTAREALR  368 (379)
Q Consensus       356 dP~~Rpta~e~l~  368 (379)
                      ||++||+++++++
T Consensus       243 ~p~~Rp~~~~i~~  255 (260)
T cd05069         243 DPDERPTFEYIQS  255 (260)
T ss_pred             CcccCcCHHHHHH
Confidence            9999999999974

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=3.4e-38  Score=292.08  Aligned_cols=247  Identities=21%  Similarity=0.272  Sum_probs=189.5

Q ss_pred             hhhhhhccccccceeEEEEEecCCCce--EEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEM--VAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~--vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|+||.||+|.++.++..  +|+|.++..  ......+.+|+.++.++.    +|++++++++++...+..
T Consensus         8 ~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~----~h~~iv~~~~~~~~~~~~   83 (303)
T cd05088           8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG----HHPNIINLLGACEHRGYL   83 (303)
T ss_pred             hceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhc----CCCCcceEEEEECCCCCc
Confidence            567789999999999999998877754  577776532  223345667888887772    568999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccccc
Q 017021          120 CIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI  184 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~--------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~  184 (379)
                      |+||||+ +++|.+++....              ...+++..+..++.|++.||+|||+.|++||||||+||+++     
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~-----  158 (303)
T cd05088          84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG-----  158 (303)
T ss_pred             eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec-----
Confidence            9999999 899999997542              12478999999999999999999999999999999999994     


Q ss_pred             ccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHH
Q 017021          185 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL  262 (379)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l  262 (379)
                                            .+..++|+|||.+.......  ....++..|+|||.+.+..++.++|||||||++|+|
T Consensus       159 ----------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  216 (303)
T cd05088         159 ----------------------ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI  216 (303)
T ss_pred             ----------------------CCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHH
Confidence                                  45567777777664322111  112235679999999888889999999999999999


Q ss_pred             Hh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccc
Q 017021          263 CT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  341 (379)
Q Consensus       263 ~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (379)
                      ++ |..||...+..+....+....  .+                    .                          .....
T Consensus       217 lt~g~~p~~~~~~~~~~~~~~~~~--~~--------------------~--------------------------~~~~~  248 (303)
T cd05088         217 VSLGGTPYCGMTCAELYEKLPQGY--RL--------------------E--------------------------KPLNC  248 (303)
T ss_pred             HhcCCCCcccCChHHHHHHHhcCC--cC--------------------C--------------------------CCCCC
Confidence            98 999997655443332211100  00                    0                          00124


Q ss_pred             hhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          342 AGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       342 ~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      +.++.+++.+||+.||++||++++++++
T Consensus       249 ~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         249 DDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            5678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=8.1e-38  Score=282.91  Aligned_cols=248  Identities=26%  Similarity=0.336  Sum_probs=197.5

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      +....|++.++||+|+||.||+|.+.. ++.||+|.+.........+..|+..++.+     .|++++++++++......
T Consensus         3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~-~~~~~vK~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   76 (261)
T cd05034           3 IPRESLKLERKLGAGQFGEVWMGTWNG-TTKVAVKTLKPGTMSPEAFLQEAQIMKKL-----RHDKLVQLYAVCSEEEPI   76 (261)
T ss_pred             cchhheeeeeeeccCcceEEEEEEEcC-CceEEEEEecCCccCHHHHHHHHHHHhhC-----CCCCEeeeeeeeecCCce
Confidence            445678899999999999999999764 57799999986555566778899988887     679999999999998999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      +++|||+ +++|.+++.......+++..+..++.|++.||.|||+.|++|+||+|+||+++                   
T Consensus        77 ~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~-------------------  137 (261)
T cd05034          77 YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG-------------------  137 (261)
T ss_pred             EEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc-------------------
Confidence            9999999 89999999876545689999999999999999999999999999999999994                   


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCc
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  273 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~  273 (379)
                              .++.++|+|||.+.......    ....++..|+|||.+.+..++.++|+|||||++|++++ |+.||.+.+
T Consensus       138 --------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~  209 (261)
T cd05034         138 --------ENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT  209 (261)
T ss_pred             --------CCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence                    44566777777665433211    11223567999999998889999999999999999998 999997655


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+...... +                     .                          ....+.++.+++.+||
T Consensus       210 ~~~~~~~~~~~~~~-~---------------------~--------------------------~~~~~~~~~~~i~~~l  241 (261)
T cd05034         210 NREVLEQVERGYRM-P---------------------R--------------------------PPNCPEELYDLMLQCW  241 (261)
T ss_pred             HHHHHHHHHcCCCC-C---------------------C--------------------------CCCCCHHHHHHHHHHc
Confidence            44433332221100 0                     0                          0123567899999999


Q ss_pred             ccCCCCCcCHHHHhc
Q 017021          354 RYDPTDRLTAREALR  368 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~  368 (379)
                      +.||++||+++++++
T Consensus       242 ~~~p~~Rp~~~~l~~  256 (261)
T cd05034         242 DKDPEERPTFEYLQS  256 (261)
T ss_pred             ccCcccCCCHHHHHH
Confidence            999999999999873

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=3e-38  Score=285.69  Aligned_cols=248  Identities=28%  Similarity=0.454  Sum_probs=194.7

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc------chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI------KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      .|.+.++||+|+||.||++.+..++..+++|+++..      ......+..|..++..+     +|+|++++++++....
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   75 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-----DHPAIVKFHASFLERD   75 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC-----CCCcHHHHHHHHhcCC
Confidence            478889999999999999999888877877776531      12233445677777666     7899999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~--~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      ..++++||+ +++|.+++..  .....+++..+..++.|++.||.|||+.|++|+|++|+||++..              
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~--------------  141 (260)
T cd08222          76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN--------------  141 (260)
T ss_pred             ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec--------------
Confidence            999999999 8899988864  22246899999999999999999999999999999999999932              


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                    ..++|+|||.+.......   ....|+..|+|||...+..++.++|+||||+++|+|++|..||..
T Consensus       142 --------------~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~  207 (260)
T cd08222         142 --------------NLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEG  207 (260)
T ss_pred             --------------CCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                          237777777665432221   234578899999999888889999999999999999999999976


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      ....+....+..  +..+.                                              ....++.++.++|.+
T Consensus       208 ~~~~~~~~~~~~--~~~~~----------------------------------------------~~~~~~~~~~~li~~  239 (260)
T cd08222         208 QNFLSVVLRIVE--GPTPS----------------------------------------------LPETYSRQLNSIMQS  239 (260)
T ss_pred             ccHHHHHHHHHc--CCCCC----------------------------------------------CcchhcHHHHHHHHH
Confidence            544333222211  11110                                              012356788999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      ||+.||++||++.|+++||||
T Consensus       240 ~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         240 MLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HhcCChhhCcCHHHHhhCCCC
Confidence            999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=8e-38  Score=281.80  Aligned_cols=249  Identities=28%  Similarity=0.417  Sum_probs=199.6

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.++||.|++|.||++.++.+++.+|+|.+....   ........|+..++.+     .|++++.+.+.+......+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASV-----NHPNIISYKEAFLDGNKLC   75 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhC-----CCCCchhhhhhhccCCEEE
Confidence            3778899999999999999999999999999987432   2334555677777777     6789999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      +|+||+ +++|.+++...  ....+++..+..++.|++.||+|||+.|++|+||+|+||++.                  
T Consensus        76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~------------------  137 (256)
T cd08530          76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV------------------  137 (256)
T ss_pred             EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEe------------------
Confidence            999999 89999998662  223688999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCC-CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                               .+..++|+|||.+...... .....++..|++||.+.+..++.++|+||||+++|+|++|+.||...+..+
T Consensus       138 ---------~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~  208 (256)
T cd08530         138 ---------ANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD  208 (256)
T ss_pred             ---------cCCcEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                     3455777777776543332 123457889999999988889999999999999999999999998766544


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+....  .+.                                              .....+.++.+++.+||+.|
T Consensus       209 ~~~~~~~~~--~~~----------------------------------------------~~~~~~~~~~~li~~~l~~~  240 (256)
T cd08530         209 LRYKVQRGK--YPP----------------------------------------------IPPIYSQDLQNFIRSMLQVK  240 (256)
T ss_pred             HHHHHhcCC--CCC----------------------------------------------CchhhCHHHHHHHHHHcCCC
Confidence            332221111  000                                              01134567999999999999


Q ss_pred             CCCCcCHHHHhcCCCC
Q 017021          357 PTDRLTAREALRHPFF  372 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f  372 (379)
                      |++|||+.|+++||++
T Consensus       241 p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         241 PKLRPNCDKILASPAV  256 (256)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1e-37  Score=281.66  Aligned_cols=241  Identities=25%  Similarity=0.376  Sum_probs=193.7

Q ss_pred             hccccccceeEEEEEecCC---CceEEEEEeeccchh--hHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEE
Q 017021           49 SKMGEGTFGQVLECWDRER---KEMVAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  123 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~~--~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~  123 (379)
                      +.||+|+||.||+|.+...   +..||+|++......  ...+..|+..+..+     .|++++++++++......+++|
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~lv~   75 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL-----GHPNVVRLLGVCTEEEPLYLVL   75 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhc-----CCCChheeeeeecCCCceEEEE
Confidence            4689999999999998866   899999999754332  45667788888877     5799999999999999999999


Q ss_pred             eCC-CCCHHHHHHhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          124 EKL-GSSLYDFLRKNN-------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       124 e~~-~~sL~~~l~~~~-------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      ||+ +++|.+++....       ...+++..+..++.|++.||+|||+.|++||||+|+||+++                
T Consensus        76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~----------------  139 (262)
T cd00192          76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG----------------  139 (262)
T ss_pred             EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC----------------
Confidence            999 999999998751       24689999999999999999999999999999999999994                


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALF  269 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf  269 (379)
                                 .++.++|+|||.+......     .....++..|+|||.+....++.++|||||||++|+|++ |..||
T Consensus       140 -----------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~  208 (262)
T cd00192         140 -----------EDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPY  208 (262)
T ss_pred             -----------CCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCC
Confidence                       4456777777776544332     123456788999999988889999999999999999998 69999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      ......+....+...  .                    ....                          ....+.++.+++
T Consensus       209 ~~~~~~~~~~~~~~~--~--------------------~~~~--------------------------~~~~~~~~~~li  240 (262)
T cd00192         209 PGLSNEEVLEYLRKG--Y--------------------RLPK--------------------------PEYCPDELYELM  240 (262)
T ss_pred             CCCCHHHHHHHHHcC--C--------------------CCCC--------------------------CccCChHHHHHH
Confidence            876544433322220  0                    0000                          123467899999


Q ss_pred             hhccccCCCCCcCHHHHhcC
Q 017021          350 QGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~h  369 (379)
                      .+||+.||++|||+.|+++|
T Consensus       241 ~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         241 LSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             HHHccCCcccCcCHHHHHHh
Confidence            99999999999999999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=9.2e-38  Score=283.54  Aligned_cols=246  Identities=22%  Similarity=0.308  Sum_probs=192.0

Q ss_pred             hhhhhhhccccccceeEEEEEecCC---CceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRER---KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      ..|++.+.||+|+||.||+|.++.+   ...||+|.++..  ......+..|+.++..+     .|++++++++++..++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   78 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQF-----DHPNIIRLEGVVTKSR   78 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhC-----CCCCcceEeEEEecCC
Confidence            4578889999999999999988654   467999998643  22344566788888877     6799999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..+++|||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++.                
T Consensus        79 ~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~----------------  141 (266)
T cd05033          79 PVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNS----------------  141 (266)
T ss_pred             ceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC----------------
Confidence            999999999 889999997754 25899999999999999999999999999999999999944                


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCC
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQ  270 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~  270 (379)
                                 +..++|+|||.+.......     ....++..|+|||.+.+..++.++||||||+++|+|++ |..||.
T Consensus       142 -----------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~  210 (266)
T cd05033         142 -----------NLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYW  210 (266)
T ss_pred             -----------CCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCC
Confidence                       4456666666665433111     11124567999999988889999999999999999998 999996


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      .....+....+.+.... +                     .                          ....+..+.+++.
T Consensus       211 ~~~~~~~~~~~~~~~~~-~---------------------~--------------------------~~~~~~~l~~li~  242 (266)
T cd05033         211 DMSNQDVIKAVEDGYRL-P---------------------P--------------------------PMDCPSALYQLML  242 (266)
T ss_pred             CCCHHHHHHHHHcCCCC-C---------------------C--------------------------CCCCCHHHHHHHH
Confidence            55443333222211100 0                     0                          0124568899999


Q ss_pred             hccccCCCCCcCHHHHhcC
Q 017021          351 GLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~h  369 (379)
                      +||+.||++||++.|++++
T Consensus       243 ~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         243 DCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HHcCCCcccCcCHHHHHHH
Confidence            9999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=7.9e-38  Score=285.74  Aligned_cols=249  Identities=22%  Similarity=0.302  Sum_probs=190.2

Q ss_pred             chhhhhhhhccccccceeEEEEEec-----CCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      ....|++.+.||+|+||.||+|.++     .++..||+|.++...  .....+..|+.++..+     .|+|++++++++
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~iv~~~~~~   78 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-----NCHHVVRLLGVV   78 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCeeeEEEEE
Confidence            3456889999999999999999864     345779999986432  2334566788777776     779999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCC--------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccccc
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNY--------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI  184 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~--------~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~  184 (379)
                      ..+...++||||+ +++|.+++.....        ..++...+..++.|++.||.|||+.|++||||||+||+++     
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~-----  153 (277)
T cd05062          79 SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA-----  153 (277)
T ss_pred             cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc-----
Confidence            9999999999999 8999999875321        1356788899999999999999999999999999999994     


Q ss_pred             ccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHH
Q 017021          185 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL  259 (379)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il  259 (379)
                                            .++.++|+|||.+.......     ....++..|+|||.+.+..++.++|||||||++
T Consensus       154 ----------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l  211 (277)
T cd05062         154 ----------------------EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL  211 (277)
T ss_pred             ----------------------CCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHH
Confidence                                  44556667777654322111     112346789999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhh
Q 017021          260 VELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV  338 (379)
Q Consensus       260 ~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (379)
                      |+|++ |..||...+..+....+....                      ....                          .
T Consensus       212 ~el~~~~~~p~~~~~~~~~~~~~~~~~----------------------~~~~--------------------------~  243 (277)
T cd05062         212 WEIATLAEQPYQGMSNEQVLRFVMEGG----------------------LLDK--------------------------P  243 (277)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHcCC----------------------cCCC--------------------------C
Confidence            99998 788997655433332221110                      0000                          1


Q ss_pred             ccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       339 ~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      ...+..+.+++.+||+.||++|||+.|++++
T Consensus       244 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         244 DNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            1345679999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.8e-38  Score=285.51  Aligned_cols=248  Identities=23%  Similarity=0.331  Sum_probs=192.7

Q ss_pred             chhhhhhhhccccccceeEEEEEecCC-----CceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRER-----KEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~-----~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      ....|++.+.||+|+||.||+|.++..     +..||+|.+....  .....+..|+.++..+     .|++++++++++
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~   78 (277)
T cd05032           4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEF-----NCHHVVRLLGVV   78 (277)
T ss_pred             chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhC-----CCCceeEEEEEE
Confidence            445678889999999999999987643     4889999986432  2334566777877776     778999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccccc
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNN--------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI  184 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~--------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~  184 (379)
                      ......++||||+ +++|.+++....        ...+++..+..++.|++.||.|||+.|++||||||+||+++     
T Consensus        79 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~-----  153 (277)
T cd05032          79 STGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA-----  153 (277)
T ss_pred             cCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEc-----
Confidence            9999999999999 899999997532        12367889999999999999999999999999999999994     


Q ss_pred             ccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHH
Q 017021          185 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL  259 (379)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il  259 (379)
                                            .++.++|+|||.++......     ....++..|+|||.+.+..++.++|||||||++
T Consensus       154 ----------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  211 (277)
T cd05032         154 ----------------------EDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVL  211 (277)
T ss_pred             ----------------------CCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHH
Confidence                                  44556677777664322211     223457789999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhh
Q 017021          260 VELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV  338 (379)
Q Consensus       260 ~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (379)
                      |++++ |..||...+..+....+..  +.                    ....                          .
T Consensus       212 ~el~t~g~~p~~~~~~~~~~~~~~~--~~--------------------~~~~--------------------------~  243 (277)
T cd05032         212 WEMATLAEQPYQGLSNEEVLKFVID--GG--------------------HLDL--------------------------P  243 (277)
T ss_pred             HHhhccCCCCCccCCHHHHHHHHhc--CC--------------------CCCC--------------------------C
Confidence            99998 9999976555443332221  00                    0111                          1


Q ss_pred             ccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          339 DHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       339 ~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      ...+..+.+++.+||+.+|++|||+.++++
T Consensus       244 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         244 ENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            124578999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=1e-37  Score=290.16  Aligned_cols=292  Identities=19%  Similarity=0.217  Sum_probs=194.1

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      |+|.+.+|.|++  ||.+++..+++.||+|+++..   ......+..|+..+..+     .|+|++.+++.+...+..++
T Consensus         4 ~~i~~~~~~~~~--v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l-----~h~~i~~~~~~~~~~~~~~~   76 (314)
T cd08216           4 TLIGKCFEDLMI--VHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQL-----QHPNILPYVTSFIVDSELYV   76 (314)
T ss_pred             hhhhHhhcCCce--EEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhc-----CCcchhhhhheeecCCeEEE
Confidence            455555555544  555555678999999998743   23345677788888887     67999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +|||+ +++|.+++.......+++..+..++.|++.||+|||+.||+||||||+||+++.++.+++.||+.+........
T Consensus        77 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~  156 (314)
T cd08216          77 VSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGK  156 (314)
T ss_pred             EEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccc
Confidence            99999 89999999875444689999999999999999999999999999999999997666666665554432211000


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC--CCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  278 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~  278 (379)
                      .        .         ...........++..|+|||.+..  ..++.++|+||+||++|+|++|+.||.........
T Consensus       157 ~--------~---------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~  219 (314)
T cd08216         157 R--------Q---------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQML  219 (314)
T ss_pred             c--------c---------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            0        0         000001122346778999999876  35789999999999999999999999865433221


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCC
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  358 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  358 (379)
                        +.+..+..+...-......     .........        ....................+.++.+++++||+.||+
T Consensus       220 --~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  284 (314)
T cd08216         220 --LEKVRGTVPCLLDKSTYPL-----YEDSMSQSR--------SSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPE  284 (314)
T ss_pred             --HHHHhccCccccccCchhh-----hcCCcCccc--------ccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCC
Confidence              2222222221100000000     000000000        0000000000011111223567899999999999999


Q ss_pred             CCcCHHHHhcCCCCCCC
Q 017021          359 DRLTAREALRHPFFTRD  375 (379)
Q Consensus       359 ~Rpta~e~l~hp~f~~~  375 (379)
                      +|||++|+|+||||+..
T Consensus       285 ~Rpt~~~ll~~p~~~~~  301 (314)
T cd08216         285 SRPSASQLLNHSFFKQC  301 (314)
T ss_pred             cCcCHHHHhcCchHhhh
Confidence            99999999999999854

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-39  Score=281.09  Aligned_cols=286  Identities=27%  Similarity=0.460  Sum_probs=232.6

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc---
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN---  117 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~---  117 (379)
                      +|.=+..+|.|.- .|..|.|..+++.||+|.+...   .....++.+|...+..+     .|+|++.++.+|....   
T Consensus        18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v-----~~~nii~l~n~ftP~~~l~   91 (369)
T KOG0665|consen   18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCV-----NHKNIISLLNVFTPQKTLE   91 (369)
T ss_pred             eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhh-----cccceeeeeeccCccccHH
Confidence            3455578899988 8899999999999999998632   33456777899998888     8899999999997543   


Q ss_pred             ---eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          118 ---HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       118 ---~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                         .+|+|||++..+|.+.+..    .+.-+.+..+++|++.|++|||+.||+||||||+||++                
T Consensus        92 ~~~e~y~v~e~m~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv----------------  151 (369)
T KOG0665|consen   92 EFQEVYLVMELMDANLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV----------------  151 (369)
T ss_pred             HHHhHHHHHHhhhhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee----------------
Confidence               5899999999999999874    36778899999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCC-C-CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-Q-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                 ..++.+|+.|||.|+..++. . ...+.|..|.|||++.+..+...+||||+||++.||++|+..|.+.
T Consensus       152 -----------~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~  220 (369)
T KOG0665|consen  152 -----------NSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK  220 (369)
T ss_pred             -----------cchhheeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc
Confidence                       66778888899988877766 2 3457899999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+...++.+.+|.+-+..++++.+..+.+..+.    +..-.  -.+..+..+..... ..+.....+..++|++.+|
T Consensus       221 d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~----~~y~~--~~f~~~fpD~~f~~-~~e~~~~~~~~ardll~~M  293 (369)
T KOG0665|consen  221 DHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENR----PQYQA--ISFSELFPDSLFPV-VLEGSKLDCSLARDLLSKM  293 (369)
T ss_pred             hHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcC----hHhhc--cchhhhCCcccccc-cccCCccchHHHHHHHHHh
Confidence            99999999999999999999999999998887731    11110  01111111111111 0111124557799999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFFT  373 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~  373 (379)
                      |..||++|.|++++|+||||+
T Consensus       294 Lvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  294 LVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             hccChhhcccHHHHhcCCeee
Confidence            999999999999999999996

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=3.9e-38  Score=319.00  Aligned_cols=268  Identities=20%  Similarity=0.258  Sum_probs=194.6

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.++||+|+||.||+|.+..+++.||+|++...    ......+.+|+.++..+     .|+|++++++.+.+++..
T Consensus         3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L-----~HPNIVkl~~v~~d~~~l   77 (932)
T PRK13184          3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADL-----IHPGIVPVYSICSDGDPV   77 (932)
T ss_pred             CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC-----CCcCcCeEEEEEeeCCEE
Confidence            578899999999999999999999999999998642    23345677889888888     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNN---------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~---------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                      |++|||+ |++|.+++....         ...++...+..++.||+.||+|||+.||+||||||+||+++..+.++++||
T Consensus        78 yLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDF  157 (932)
T PRK13184         78 YYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDW  157 (932)
T ss_pred             EEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEec
Confidence            9999999 999999986421         123456778899999999999999999999999999999977776667777


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCC
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                      |++.......+..      ........+.............||+.|+|||.+.+..++.++|||||||++|+|++|..||
T Consensus       158 GLAk~i~~~~~~~------~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF  231 (932)
T PRK13184        158 GAAIFKKLEEEDL------LDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPY  231 (932)
T ss_pred             Ccceecccccccc------cccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCC
Confidence            6664431111000      0000000000000011112346999999999999989999999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      ......+....  ..... |...                                           ......++.+.+++
T Consensus       232 ~~~~~~ki~~~--~~i~~-P~~~-------------------------------------------~p~~~iP~~L~~LI  265 (932)
T PRK13184        232 RRKKGRKISYR--DVILS-PIEV-------------------------------------------APYREIPPFLSQIA  265 (932)
T ss_pred             CCcchhhhhhh--hhccC-hhhc-------------------------------------------cccccCCHHHHHHH
Confidence            76433221110  00000 0000                                           00113567789999


Q ss_pred             hhccccCCCCCcCHHHHhc
Q 017021          350 QGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~  368 (379)
                      .+||+.||++|+++.+.+.
T Consensus       266 ~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        266 MKALAVDPAERYSSVQELK  284 (932)
T ss_pred             HHHccCChhhCcCHHHHHH
Confidence            9999999999988766553

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=1.1e-37  Score=283.06  Aligned_cols=246  Identities=26%  Similarity=0.384  Sum_probs=192.7

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|++|.||+|.+..+++.+|+|.+...    ......+..|+.++..+     .|+|++++++.+..++..
T Consensus         3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~   77 (267)
T cd08229           3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-----NHPNVIKYYASFIEDNEL   77 (267)
T ss_pred             hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-----cCCchhhhhheeEeCCeE
Confidence            578899999999999999999999999999988632    22334666788888887     779999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      +++|||+ +++|.+++...  ....+++..+..++.||+.||.|||+.|++|+||+|+||+++                 
T Consensus        78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~-----------------  140 (267)
T cd08229          78 NIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT-----------------  140 (267)
T ss_pred             EEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc-----------------
Confidence            9999999 88999998642  223588999999999999999999999999999999999994                 


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                .++.++|+|||.+.......   ....|+..|+|||.+.+..++.++|+||||+++|+|++|..||.+..
T Consensus       141 ----------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  210 (267)
T cd08229         141 ----------ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             ----------CCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCccccc
Confidence                      44556777777665332221   23467889999999988889999999999999999999999996533


Q ss_pred             hH--HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          274 NL--EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       274 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      ..  +....+.....+ +                     .                         .....+..+.+++.+
T Consensus       211 ~~~~~~~~~~~~~~~~-~---------------------~-------------------------~~~~~~~~~~~li~~  243 (267)
T cd08229         211 MNLYSLCKKIEQCDYP-P---------------------L-------------------------PSDHYSEELRQLVNM  243 (267)
T ss_pred             chHHHHhhhhhcCCCC-C---------------------C-------------------------CcccccHHHHHHHHH
Confidence            21  111111110000 0                     0                         011356789999999


Q ss_pred             ccccCCCCCcCHHHHhc
Q 017021          352 LLRYDPTDRLTAREALR  368 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~  368 (379)
                      ||+.||++|||+.++++
T Consensus       244 ~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         244 CINPDPEKRPDITYVYD  260 (267)
T ss_pred             hcCCCcccCCCHHHHHH
Confidence            99999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=7.5e-38  Score=299.47  Aligned_cols=255  Identities=20%  Similarity=0.248  Sum_probs=194.7

Q ss_pred             eeeeechhhhhhhhccccccceeEEEEEecCC-----CceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEE
Q 017021           36 TYIVFSAFADKIHSKMGEGTFGQVLECWDRER-----KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQ  108 (379)
Q Consensus        36 ~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~-----~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~  108 (379)
                      +...++...|++.+.||+|+||.||+|.+...     +..||+|+++..  ......+..|+.++..+    ..|+||++
T Consensus        30 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l----~~HpnIv~  105 (400)
T cd05105          30 SRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHL----GPHLNIVN  105 (400)
T ss_pred             CceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhc----CCCCCeee
Confidence            34556677899999999999999999987433     357999999643  22345677888888887    24799999


Q ss_pred             ecceeeecceEEEEEeCC-CCCHHHHHHhCC-------------------------------------------------
Q 017021          109 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNN-------------------------------------------------  138 (379)
Q Consensus       109 ~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~-------------------------------------------------  138 (379)
                      +++++......|+||||+ +++|.+++....                                                 
T Consensus       106 l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (400)
T cd05105         106 LLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADT  185 (400)
T ss_pred             EEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccc
Confidence            999999999999999999 999999886531                                                 


Q ss_pred             ---------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCC
Q 017021          139 ---------------------------------------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKP  173 (379)
Q Consensus       139 ---------------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp  173 (379)
                                                                   ...+++..+..++.|++.||+|||+.|++||||||
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp  265 (400)
T cd05105         186 TQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAA  265 (400)
T ss_pred             cccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence                                                         12367788889999999999999999999999999


Q ss_pred             CcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCC
Q 017021          174 ENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTY  248 (379)
Q Consensus       174 ~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~  248 (379)
                      +||+++                           .+..++|+|||.+.......     ....++..|+|||.+.+..++.
T Consensus       266 ~Nill~---------------------------~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  318 (400)
T cd05105         266 RNVLLA---------------------------QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTT  318 (400)
T ss_pred             HhEEEe---------------------------CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCc
Confidence            999994                           44557777777765432211     2234667899999998888999


Q ss_pred             ccchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccc
Q 017021          249 PCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL  327 (379)
Q Consensus       249 ~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (379)
                      ++|||||||++|+|++ |..||......+...........+                     .                 
T Consensus       319 ~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~---------------------~-----------------  360 (400)
T cd05105         319 LSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRM---------------------A-----------------  360 (400)
T ss_pred             hhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCC---------------------C-----------------
Confidence            9999999999999997 899987543222211111100000                     0                 


Q ss_pred             hhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          328 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                               .....+..+.+++.+||+.||++|||+.++.+
T Consensus       361 ---------~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         361 ---------KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             ---------CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence                     01235678999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=8.4e-38  Score=286.12  Aligned_cols=248  Identities=23%  Similarity=0.337  Sum_probs=191.9

Q ss_pred             chhhhhhhhccccccceeEEEEEec-----CCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      ...+|++.++||+|+||.||++...     .++..+|+|.+... ......+..|+.++..+     .|+|++++++++.
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~   77 (280)
T cd05092           3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVL-----QHQHIVRFYGVCT   77 (280)
T ss_pred             ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcC-----CCCCCceEEEEEe
Confidence            4567788899999999999999743     35678999988643 23345667788888877     7789999999999


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEec
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNY-------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  180 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~-------------~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~  180 (379)
                      .....+++|||+ +++|.+++.....             ..+++..+..++.|++.||+|||+.|++||||||+||+++.
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~  157 (280)
T cd05092          78 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQ  157 (280)
T ss_pred             cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcC
Confidence            999999999999 8999999976431             24788999999999999999999999999999999999944


Q ss_pred             ccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhH
Q 017021          181 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSV  255 (379)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSl  255 (379)
                                                 +..++|+|||.+.......     ....+++.|+|||.+.+..++.++|||||
T Consensus       158 ---------------------------~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  210 (280)
T cd05092         158 ---------------------------GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSF  210 (280)
T ss_pred             ---------------------------CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHH
Confidence                                       4456666666654322211     12234678999999998889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHH
Q 017021          256 GCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI  334 (379)
Q Consensus       256 G~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (379)
                      ||++|+|++ |..||......+....+.+....                                               
T Consensus       211 G~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------------------------  243 (280)
T cd05092         211 GVVLWEIFTYGKQPWYQLSNTEAIECITQGREL-----------------------------------------------  243 (280)
T ss_pred             HHHHHHHHcCCCCCCccCCHHHHHHHHHcCccC-----------------------------------------------
Confidence            999999998 99999765544333222111000                                               


Q ss_pred             HHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       335 ~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                       ......++.+.++|.+||+.||.+||+++++++
T Consensus       244 -~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         244 -ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             -CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence             001135678999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=7.8e-38  Score=288.79  Aligned_cols=247  Identities=22%  Similarity=0.272  Sum_probs=189.6

Q ss_pred             hhhhhhccccccceeEEEEEecCCCc--eEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKE--MVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~--~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|+||.||+|.++.++.  .+|+|.++..  ......+..|+.++.++.    +|++++++++.+...+..
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~----~hp~iv~~~~~~~~~~~~   78 (297)
T cd05089           3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLG----HHPNIINLLGACENRGYL   78 (297)
T ss_pred             cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhc----CCCchhheEEEEccCCcc
Confidence            46788999999999999999877764  4688888632  223345677888887772    478999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccccc
Q 017021          120 CIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI  184 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~--------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~  184 (379)
                      ++++||+ +++|.+++....              ...+++..+..++.|++.||+|||+.|++||||||+||+++     
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~-----  153 (297)
T cd05089          79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG-----  153 (297)
T ss_pred             eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC-----
Confidence            9999999 899999997532              12478899999999999999999999999999999999994     


Q ss_pred             ccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCc--ccccCCccchhhhhCCCCCCccchHhHHHHHHHH
Q 017021          185 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL  262 (379)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l  262 (379)
                                            .+..++|+|||.+.........  ...+..|+|||.+.+..++.++|||||||++|+|
T Consensus       154 ----------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el  211 (297)
T cd05089         154 ----------------------ENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEI  211 (297)
T ss_pred             ----------------------CCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHH
Confidence                                  4455677777766432211111  1224569999999888899999999999999999


Q ss_pred             Hh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccc
Q 017021          263 CT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  341 (379)
Q Consensus       263 ~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (379)
                      ++ |..||......+....+.+.....                                                ....+
T Consensus       212 ~t~g~~pf~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~  243 (297)
T cd05089         212 VSLGGTPYCGMTCAELYEKLPQGYRME------------------------------------------------KPRNC  243 (297)
T ss_pred             HcCCCCCCCCCCHHHHHHHHhcCCCCC------------------------------------------------CCCCC
Confidence            97 999998765544333221111000                                                01235


Q ss_pred             hhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          342 AGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       342 ~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      +.++.+|+.+||+.||.+|||++++++.
T Consensus       244 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         244 DDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            6789999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=8.1e-38  Score=281.96  Aligned_cols=243  Identities=21%  Similarity=0.290  Sum_probs=191.7

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ...|++.+.||+|+||.||++.  .+++.||+|+++... ....+..|+..+..+     .|++++++++.+..+. .++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~-~~~   75 (254)
T cd05083           5 LQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-TAQAFLEETAVMTKL-----HHKNLVRLLGVILHNG-LYI   75 (254)
T ss_pred             HHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-hHHHHHHHHHHHHhC-----CCCCcCeEEEEEcCCC-cEE
Confidence            3568899999999999999985  567889999997533 345677788888877     7789999998886554 799


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +|||+ +++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||+++                     
T Consensus        76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~---------------------  134 (254)
T cd05083          76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS---------------------  134 (254)
T ss_pred             EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---------------------
Confidence            99999 89999999876545689999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHHHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  279 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~  279 (379)
                            .++.++|+|||.+............+..|+|||.+.+..++.++|+|||||++|+|++ |+.||...+..+...
T Consensus       135 ------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~  208 (254)
T cd05083         135 ------EDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKE  208 (254)
T ss_pred             ------CCCcEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHH
Confidence                  4456777777776543332222334567999999988889999999999999999997 999997655444332


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                      .+.+.....+                                                .+..+..+.+++.+||+.+|+.
T Consensus       209 ~~~~~~~~~~------------------------------------------------~~~~~~~~~~li~~~l~~~p~~  240 (254)
T cd05083         209 CVEKGYRMEP------------------------------------------------PEGCPADVYVLMTSCWETEPKK  240 (254)
T ss_pred             HHhCCCCCCC------------------------------------------------CCcCCHHHHHHHHHHcCCChhh
Confidence            2221110000                                                1135678899999999999999


Q ss_pred             CcCHHHHhc
Q 017021          360 RLTAREALR  368 (379)
Q Consensus       360 Rpta~e~l~  368 (379)
                      ||++++++.
T Consensus       241 Rp~~~~l~~  249 (254)
T cd05083         241 RPSFHKLRE  249 (254)
T ss_pred             CcCHHHHHH
Confidence            999999974

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.1e-37  Score=281.68  Aligned_cols=236  Identities=22%  Similarity=0.324  Sum_probs=183.9

Q ss_pred             ccccccceeEEEEEe--cCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           50 KMGEGTFGQVLECWD--RERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        50 ~Lg~G~~g~V~~~~~--~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +||+|+||.||+|.+  +.++..+|+|+++...   .....+..|+.++..+     .|+++++++++++ ....++|||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~-~~~~~lv~e   75 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQL-----DNPYIVRMIGICE-AESWMLVME   75 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEc-CCCcEEEEe
Confidence            689999999999964  4667899999986432   2345566788888877     7799999998875 446789999


Q ss_pred             CC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          125 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                      |+ +++|.+++....  .+++..+..++.|++.||+|||+.|++||||||+||+++.                       
T Consensus        76 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~-----------------------  130 (257)
T cd05116          76 LAELGPLNKFLQKNK--HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVT-----------------------  130 (257)
T ss_pred             cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcC-----------------------
Confidence            99 789999997654  5899999999999999999999999999999999999944                       


Q ss_pred             cCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHH
Q 017021          204 RMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  276 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~  276 (379)
                          +..++|+|||.+.......      ....++..|+|||.+....++.++|+|||||++|+|++ |..||...+..+
T Consensus       131 ----~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  206 (257)
T cd05116         131 ----QHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE  206 (257)
T ss_pred             ----CCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                4456666766665432221      11123568999999988888999999999999999998 999998766555


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.+...+                      +.                          ....+.++.++|.+||+.|
T Consensus       207 ~~~~i~~~~~~----------------------~~--------------------------~~~~~~~l~~li~~~~~~~  238 (257)
T cd05116         207 VTQMIESGERM----------------------EC--------------------------PQRCPPEMYDLMKLCWTYG  238 (257)
T ss_pred             HHHHHHCCCCC----------------------CC--------------------------CCCCCHHHHHHHHHHhccC
Confidence            44433321110                      01                          1135678999999999999


Q ss_pred             CCCCcCHHHHhc
Q 017021          357 PTDRLTAREALR  368 (379)
Q Consensus       357 P~~Rpta~e~l~  368 (379)
                      |++||++++|..
T Consensus       239 p~~Rp~~~~i~~  250 (257)
T cd05116         239 VDERPGFAVVEL  250 (257)
T ss_pred             chhCcCHHHHHH
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=6.1e-38  Score=289.33  Aligned_cols=260  Identities=23%  Similarity=0.388  Sum_probs=195.8

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ....|++.+.||+|++|.||+|.+..+++.||+|+++...  ........|+..+...    ..|++++.+++++.....
T Consensus        13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~----~~~~~i~~~~~~~~~~~~   88 (296)
T cd06618          13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKS----HDCPYIVKCYGYFITDSD   88 (296)
T ss_pred             CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhc----cCCCchHhhheeeecCCe
Confidence            3456788899999999999999999999999999997432  2233344455544443    257899999999999999


Q ss_pred             EEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .|++|||+++++.+++.... ..+++..+..++.|++.||+|||+ .|++||||+|+||+++                  
T Consensus        89 ~~~v~e~~~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~------------------  149 (296)
T cd06618          89 VFICMELMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLD------------------  149 (296)
T ss_pred             EEEEeeccCcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEc------------------
Confidence            99999999888888877643 368999999999999999999997 6999999999999994                  


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCC----CCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                               .++.++|+|||.+.......  ....++..|+|||.+.+..    ++.++|+||||+++|+|++|+.||..
T Consensus       150 ---------~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  220 (296)
T cd06618         150 ---------ASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKN  220 (296)
T ss_pred             ---------CCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCc
Confidence                     44567777777665332211  2234678899999986543    78899999999999999999999965


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      ....  ...+.+......                   ..++.                        ...++.++.+|+.+
T Consensus       221 ~~~~--~~~~~~~~~~~~-------------------~~~~~------------------------~~~~~~~l~~li~~  255 (296)
T cd06618         221 CKTE--FEVLTKILQEEP-------------------PSLPP------------------------NEGFSPDFCSFVDL  255 (296)
T ss_pred             chhH--HHHHHHHhcCCC-------------------CCCCC------------------------CCCCCHHHHHHHHH
Confidence            3221  111111111000                   00000                        01245689999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      ||..||++||+++++++||||.....
T Consensus       256 ~l~~~p~~Rp~~~~il~~~~~~~~~~  281 (296)
T cd06618         256 CLTKDHRKRPKYRELLQHPFIRRYET  281 (296)
T ss_pred             HccCChhhCCCHHHHhcChhhhccch
Confidence            99999999999999999999987553

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=1.7e-37  Score=287.17  Aligned_cols=252  Identities=22%  Similarity=0.341  Sum_probs=193.7

Q ss_pred             eechhhhhhhhccccccceeEEEEEe-----cCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWD-----RERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~-----~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      .+....|.+.+.||+|+||.||++.+     ..++..||+|.++...  .....+..|+.++.++    .+|+|++++++
T Consensus        31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l----~~h~~iv~~~~  106 (302)
T cd05055          31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHL----GNHENIVNLLG  106 (302)
T ss_pred             cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhc----cCCCCcceEEE
Confidence            34555788899999999999999975     3446689999987432  2234567788888877    24789999999


Q ss_pred             eeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCc
Q 017021          112 WFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                      .+...+..+++|||+ +++|.+++.......+++.++..++.|++.||.|||+.+++|+||||+||+++.          
T Consensus       107 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~----------  176 (302)
T cd05055         107 ACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTH----------  176 (302)
T ss_pred             EEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcC----------
Confidence            999999999999999 899999997654345899999999999999999999999999999999999954          


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-  264 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-  264 (379)
                                       +..++|+|||.+.......     ....++..|+|||.+.+..++.++||||+||++|+|++ 
T Consensus       177 -----------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~  239 (302)
T cd05055         177 -----------------GKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSL  239 (302)
T ss_pred             -----------------CCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhC
Confidence                             4456666666654322211     11235678999999988889999999999999999998 


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |..||......+............                     .                          .....+..
T Consensus       240 g~~p~~~~~~~~~~~~~~~~~~~~---------------------~--------------------------~~~~~~~~  272 (302)
T cd05055         240 GSNPYPGMPVDSKFYKLIKEGYRM---------------------A--------------------------QPEHAPAE  272 (302)
T ss_pred             CCCCcCCCCchHHHHHHHHcCCcC---------------------C--------------------------CCCCCCHH
Confidence            999997655433322211100000                     0                          01124568


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhc
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      +.+++.+||..+|++|||+.|+++
T Consensus       273 ~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         273 IYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             HHHHHHHHcCCCchhCcCHHHHHH
Confidence            999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=2.1e-37  Score=285.52  Aligned_cols=255  Identities=23%  Similarity=0.334  Sum_probs=193.5

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCC----------------ceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCC
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERK----------------EMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKG  102 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~----------------~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~  102 (379)
                      ....|++.++||+|+||.||+|.+..++                ..||+|.+....  .....+..|+.+++++     .
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-----~   77 (296)
T cd05051           3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRL-----S   77 (296)
T ss_pred             chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhc-----C
Confidence            4457899999999999999999876543                568999987432  3455677789999888     6


Q ss_pred             CCeeEEecceeeecceEEEEEeCC-CCCHHHHHHhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Q 017021          103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNN---------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLK  172 (379)
Q Consensus       103 ~~~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~---------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlk  172 (379)
                      |++++++++++..+...+++||++ +++|.+++....         ...+++..+..++.|++.||+|||+.|++|||||
T Consensus        78 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlk  157 (296)
T cd05051          78 DPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLA  157 (296)
T ss_pred             CCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccc
Confidence            789999999999999999999999 899999987643         1258899999999999999999999999999999


Q ss_pred             CCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhhCCCCC
Q 017021          173 PENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWT  247 (379)
Q Consensus       173 p~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~  247 (379)
                      |+||+++.                           +..++|+|||.+......     .....++..|+|||.+.+..++
T Consensus       158 p~Nili~~---------------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  210 (296)
T cd05051         158 TRNCLVGK---------------------------NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFT  210 (296)
T ss_pred             hhceeecC---------------------------CCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCC
Confidence            99999954                           455666666665432211     1123456789999999888899


Q ss_pred             CccchHhHHHHHHHHHh--CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhc
Q 017021          248 YPCDIWSVGCILVELCT--GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM  325 (379)
Q Consensus       248 ~~sDvwSlG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (379)
                      .++|||||||++|+|++  +..||...+..+....+........                  ....              
T Consensus       211 ~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~------------------~~~~--------------  258 (296)
T cd05051         211 TKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDG------------------RQIY--------------  258 (296)
T ss_pred             ccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhcccccc------------------cccc--------------
Confidence            99999999999999998  7788876554443332222110000                  0000              


Q ss_pred             cchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          326 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                               .......+.++.+++.+||+.||++|||+.|+++
T Consensus       259 ---------~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         259 ---------LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             ---------CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence                     0001134578999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=1.2e-37  Score=286.38  Aligned_cols=254  Identities=24%  Similarity=0.417  Sum_probs=196.2

Q ss_pred             hhhhhhccccccceeEEEEEec---CCCceEEEEEeeccc-----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           44 ADKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGIK-----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      .|++.+.||+|+||.||.|++.   .+|+.||+|++....     ........|+.++.++.    +|++++.+++.++.
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~----~~~~i~~~~~~~~~   76 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR----QSPFLVTLHYAFQT   76 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcc----cCCChhceeeEeec
Confidence            3788899999999999999875   478999999987422     22345566778777762    56899999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      +...|+||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++||||+|+||++                
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~----------------  138 (290)
T cd05613          77 DTKLHLILDYINGGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL----------------  138 (290)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE----------------
Confidence            99999999999 899999997754  58899999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCC--CCCCccchHhHHHHHHHHHhCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                                 +.++.++|+|||.+.......    ....|+..|+|||.+.+.  .++.++||||||+++|+|++|..|
T Consensus       139 -----------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p  207 (290)
T cd05613         139 -----------DSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASP  207 (290)
T ss_pred             -----------CCCCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCC
Confidence                       445567777877765433221    224578899999998653  467899999999999999999999


Q ss_pred             CCCCchHHHHHHHHH-HcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          269 FQTHENLEHLAMMER-VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       269 f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      |...........+.+ .....                    ..                          ..+..+..+.+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~--------------------~~--------------------------~~~~~~~~~~~  241 (290)
T cd05613         208 FTVDGEKNSQAEISRRILKSE--------------------PP--------------------------YPQEMSALAKD  241 (290)
T ss_pred             CCcCCccccHHHHHHHhhccC--------------------CC--------------------------CCccCCHHHHH
Confidence            964322111111111 00000                    00                          01235567899


Q ss_pred             HHhhccccCCCCCc-----CHHHHhcCCCCCCCC
Q 017021          348 LLQGLLRYDPTDRL-----TAREALRHPFFTRDH  376 (379)
Q Consensus       348 li~~~L~~dP~~Rp-----ta~e~l~hp~f~~~~  376 (379)
                      ++++||+.||++||     ++++++.||||....
T Consensus       242 ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         242 IIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             HHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence            99999999999997     899999999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=2.9e-37  Score=280.05  Aligned_cols=246  Identities=27%  Similarity=0.420  Sum_probs=193.0

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|++|.||+|.+..+|+.||+|.++..    ......+..|+.++.++     .|++++.+++.+...+..
T Consensus         3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-----~~~~i~~~~~~~~~~~~~   77 (267)
T cd08224           3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-----DHPNVIKYLASFIENNEL   77 (267)
T ss_pred             ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-----CCCCeeeeeeeeecCCeE
Confidence            578889999999999999999999999999988631    22345667788888887     678999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      +++|||+ +++|.+++...  ....++...+..++.+++.||.|||+.|++||||+|+||+++                 
T Consensus        78 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~-----------------  140 (267)
T cd08224          78 NIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT-----------------  140 (267)
T ss_pred             EEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEEC-----------------
Confidence            9999999 88999998652  223588999999999999999999999999999999999994                 


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                .++.++|+|||.+......   .....++..|.|||.+.+..++.++|+|||||++|+|++|..||....
T Consensus       141 ----------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  210 (267)
T cd08224         141 ----------ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             ----------CCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC
Confidence                      4455677777766533221   123457888999999988889999999999999999999999996533


Q ss_pred             h--HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          274 N--LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       274 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .  .+....+..  +..+                    ..+                         ....+..+.++|.+
T Consensus       211 ~~~~~~~~~~~~--~~~~--------------------~~~-------------------------~~~~~~~~~~~i~~  243 (267)
T cd08224         211 MNLYSLCKKIEK--CDYP--------------------PLP-------------------------ADHYSEELRDLVSR  243 (267)
T ss_pred             ccHHHHHhhhhc--CCCC--------------------CCC-------------------------hhhcCHHHHHHHHH
Confidence            1  111111110  0000                    000                         01345688999999


Q ss_pred             ccccCCCCCcCHHHHhc
Q 017021          352 LLRYDPTDRLTAREALR  368 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~  368 (379)
                      ||..+|++|||+.++++
T Consensus       244 cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         244 CINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HcCCCcccCCCHHHHHH
Confidence            99999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-39  Score=300.23  Aligned_cols=239  Identities=24%  Similarity=0.349  Sum_probs=193.4

Q ss_pred             hhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-
Q 017021           48 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-  126 (379)
Q Consensus        48 ~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-  126 (379)
                      ++=||+|+.|.||+|+  ..++.||||+++.-+      ..++.-|.++     .|+||+.+.+.+.....+||||||| 
T Consensus       129 LeWlGSGaQGAVF~Gr--l~netVAVKKV~elk------ETdIKHLRkL-----kH~NII~FkGVCtqsPcyCIiMEfCa  195 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGR--LHNETVAVKKVRELK------ETDIKHLRKL-----KHPNIITFKGVCTQSPCYCIIMEFCA  195 (904)
T ss_pred             hhhhccCcccceeeee--ccCceehhHHHhhhh------hhhHHHHHhc-----cCcceeeEeeeecCCceeEEeeeccc
Confidence            3679999999999996  446889999886321      1145556666     7899999999999999999999999 


Q ss_pred             CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCC
Q 017021          127 GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP  206 (379)
Q Consensus       127 ~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (379)
                      .|-|..++....  .++...+..|..+|+.|+.|||.+.|||||||.=||||                           .
T Consensus       196 ~GqL~~VLka~~--~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLI---------------------------s  246 (904)
T KOG4721|consen  196 QGQLYEVLKAGR--PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILI---------------------------S  246 (904)
T ss_pred             cccHHHHHhccC--ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEe---------------------------e
Confidence            999999998865  78999999999999999999999999999999999999                           5


Q ss_pred             CCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHH
Q 017021          207 KSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV  284 (379)
Q Consensus       207 ~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~  284 (379)
                      .+..+||+|||-++.....+  -.+.||..|||||++.+++.+.|+|||||||+||||+||..||...+...+...+...
T Consensus       247 ~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsN  326 (904)
T KOG4721|consen  247 YDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSN  326 (904)
T ss_pred             ccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCC
Confidence            66678888888776444332  3468999999999999999999999999999999999999999754443222111111


Q ss_pred             cCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHH
Q 017021          285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  364 (379)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~  364 (379)
                      ..                     .+++|                          ..++.-++-||++||+-.|..||++.
T Consensus       327 sL---------------------~LpvP--------------------------stcP~GfklL~Kqcw~sKpRNRPSFr  359 (904)
T KOG4721|consen  327 SL---------------------HLPVP--------------------------STCPDGFKLLLKQCWNSKPRNRPSFR  359 (904)
T ss_pred             cc---------------------cccCc--------------------------ccCchHHHHHHHHHHhcCCCCCccHH
Confidence            00                     11122                          24677888899999999999999999


Q ss_pred             HHhcCCCCCCC
Q 017021          365 EALRHPFFTRD  375 (379)
Q Consensus       365 e~l~hp~f~~~  375 (379)
                      |+|.|-=+...
T Consensus       360 qil~HldIa~p  370 (904)
T KOG4721|consen  360 QILLHLDIASP  370 (904)
T ss_pred             HHHHHHhhcCH
Confidence            99999654443

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.6e-37  Score=282.58  Aligned_cols=245  Identities=20%  Similarity=0.267  Sum_probs=186.3

Q ss_pred             hhhhhccccccceeEEEEEecC---CCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc-
Q 017021           45 DKIHSKMGEGTFGQVLECWDRE---RKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN-  117 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~---~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~-  117 (379)
                      |++.+.||+|+||.||+|.+..   ++..||+|+++...   .....+..|+..+..+     +|++++++++.+.... 
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~   75 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDF-----DHPNVMKLIGVCFEASS   75 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhC-----CCCCeeeEEeeeccCCc
Confidence            5788999999999999998765   34789999987432   2234566788877777     7899999998776544 


Q ss_pred             -----eEEEEEeCC-CCCHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccC
Q 017021          118 -----HICIVFEKL-GSSLYDFLRKNN----YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  187 (379)
Q Consensus       118 -----~~~lv~e~~-~~sL~~~l~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~  187 (379)
                           ..++++||+ +++|..++....    ...+++..+..++.|++.||.|||+.|++||||||+||+++.       
T Consensus        76 ~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~-------  148 (273)
T cd05035          76 LQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRE-------  148 (273)
T ss_pred             cccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECC-------
Confidence                 489999999 899999985431    125889999999999999999999999999999999999944       


Q ss_pred             CCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHH
Q 017021          188 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL  262 (379)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l  262 (379)
                                          +..++|+|||.+.......     ....++..|+|||.+.+..++.++|||||||++|+|
T Consensus       149 --------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el  208 (273)
T cd05035         149 --------------------DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI  208 (273)
T ss_pred             --------------------CCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHH
Confidence                                4456666666654322211     112345679999999888899999999999999999


Q ss_pred             Hh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccc
Q 017021          263 CT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  341 (379)
Q Consensus       263 ~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (379)
                      ++ |..||...+..+....+...  .                    ....                          ....
T Consensus       209 ~~~g~~p~~~~~~~~~~~~~~~~--~--------------------~~~~--------------------------~~~~  240 (273)
T cd05035         209 ATRGQTPYPGVENHEIYDYLRHG--N--------------------RLKQ--------------------------PEDC  240 (273)
T ss_pred             HhCCCCCCCCCCHHHHHHHHHcC--C--------------------CCCC--------------------------CcCC
Confidence            99 89999765544332222110  0                    0000                          1235


Q ss_pred             hhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          342 AGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       342 ~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      +..+.+++.+||+.||++|||+.|++++
T Consensus       241 ~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         241 LDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            6789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.5e-37  Score=286.23  Aligned_cols=252  Identities=21%  Similarity=0.300  Sum_probs=193.0

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCC-----CceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRER-----KEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~-----~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      .+....|++.+.||+|+||.||++.++..     ...+|+|.+....  .....+..|+.++..+    ..|++++++++
T Consensus         8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l----~~h~~i~~~~~   83 (293)
T cd05053           8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMI----GKHKNIINLLG   83 (293)
T ss_pred             ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhh----cCCCCeeeEEE
Confidence            34556788889999999999999987644     3789999987432  2234566788777776    25689999999


Q ss_pred             eeeecceEEEEEeCC-CCCHHHHHHhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcE
Q 017021          112 WFDYRNHICIVFEKL-GSSLYDFLRKN--------------NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENV  176 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~~sL~~~l~~~--------------~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Ni  176 (379)
                      ++...+..+++|||+ +++|.+++...              ....+++..+..++.|++.||+|||+.|++||||||+||
T Consensus        84 ~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Ni  163 (293)
T cd05053          84 VCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNV  163 (293)
T ss_pred             EEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeE
Confidence            999999999999999 89999999652              223588999999999999999999999999999999999


Q ss_pred             EEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccc
Q 017021          177 LLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCD  251 (379)
Q Consensus       177 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sD  251 (379)
                      +++.                           ++.++|+|||.+.......     ....++..|+|||.+.+..++.++|
T Consensus       164 l~~~---------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  216 (293)
T cd05053         164 LVTE---------------------------DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSD  216 (293)
T ss_pred             EEcC---------------------------CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccc
Confidence            9944                           4556666776665332211     1112456799999998888999999


Q ss_pred             hHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhh
Q 017021          252 IWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL  330 (379)
Q Consensus       252 vwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (379)
                      ||||||++|++++ |..||......+....+.....                      ...                   
T Consensus       217 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~----------------------~~~-------------------  255 (293)
T cd05053         217 VWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYR----------------------MEK-------------------  255 (293)
T ss_pred             eeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCc----------------------CCC-------------------
Confidence            9999999999997 9999976554443332211100                      000                   


Q ss_pred             HHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       331 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                             ....+..+.+|+.+||+.||++|||+.|++++
T Consensus       256 -------~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         256 -------PQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             -------CCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence                   11245689999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.9e-37  Score=284.25  Aligned_cols=263  Identities=24%  Similarity=0.330  Sum_probs=191.7

Q ss_pred             chhhhhhhhccccccceeEEEEEe----cCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWD----RERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~----~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      ....|++.+.||+|+||.||+|..    +.++..||+|.++..  ......+.+|+.+++.+     .|+|++++.+++.
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~   76 (284)
T cd05079           2 EKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-----YHENIVKYKGICT   76 (284)
T ss_pred             chhhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhC-----CCCCeeeeeeEEe
Confidence            456899999999999999999974    467889999998633  23345677888888887     7799999999887


Q ss_pred             ec--ceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          115 YR--NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       115 ~~--~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                      ..  ...++||||+ +++|.+++.+.. ..+++..+..++.|++.||+|||+.|++||||||+||+++.++         
T Consensus        77 ~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~---------  146 (284)
T cd05079          77 EDGGNGIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH---------  146 (284)
T ss_pred             cCCCCceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCC---------
Confidence            65  5789999999 999999997653 2589999999999999999999999999999999999995444         


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhC
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG  265 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g  265 (379)
                                        .++|+|||.+.......      ....++..|+|||.+.+..++.++|||||||++|+|+++
T Consensus       147 ------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~  208 (284)
T cd05079         147 ------------------QVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTY  208 (284)
T ss_pred             ------------------CEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcC
Confidence                              45566666554322211      123456789999999888899999999999999999998


Q ss_pred             CCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          266 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       266 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                      ..|.......     ..+..++.+......  ............+                          ....++..+
T Consensus       209 ~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--------------------------~~~~~~~~~  255 (284)
T cd05079         209 CDSESSPMTL-----FLKMIGPTHGQMTVT--RLVRVLEEGKRLP--------------------------RPPNCPEEV  255 (284)
T ss_pred             CCCCccccch-----hhhhcccccccccHH--HHHHHHHcCccCC--------------------------CCCCCCHHH
Confidence            7765432110     111122221111000  0000000000000                          112456789


Q ss_pred             HHHHhhccccCCCCCcCHHHHhcC
Q 017021          346 THLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      .+|+.+||+.||++|||+++++++
T Consensus       256 ~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         256 YQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             HHHHHHHccCCcccCcCHHHHHHH
Confidence            999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.6e-37  Score=283.98  Aligned_cols=247  Identities=22%  Similarity=0.262  Sum_probs=188.7

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCc----eEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKE----MVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~----~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      +....|++.++||+|+||+||+|.+..+++    .||+|+++..  ......+..|..++..+     +|++++.+++++
T Consensus         4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~   78 (279)
T cd05109           4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV-----GSPYVCRLLGIC   78 (279)
T ss_pred             cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhc-----CCCCCceEEEEE
Confidence            445678888999999999999999877765    4899998643  22344556677776666     678999998887


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      .. ...+++++|+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||++.             
T Consensus        79 ~~-~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~-------------  143 (279)
T cd05109          79 LT-STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK-------------  143 (279)
T ss_pred             cC-CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc-------------
Confidence            65 4577899999 899999987643 3589999999999999999999999999999999999994             


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCCC-----cccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-----YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GE  266 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~  266 (379)
                                    .+..++|+|||.+........     ...++..|+|||...+..++.++|||||||++|+|++ |.
T Consensus       144 --------------~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~  209 (279)
T cd05109         144 --------------SPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGA  209 (279)
T ss_pred             --------------CCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCC
Confidence                          344567777777654332211     1234567999999988889999999999999999998 89


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||......+....+...... +                                               .....+.++.
T Consensus       210 ~p~~~~~~~~~~~~~~~~~~~-~-----------------------------------------------~~~~~~~~~~  241 (279)
T cd05109         210 KPYDGIPAREIPDLLEKGERL-P-----------------------------------------------QPPICTIDVY  241 (279)
T ss_pred             CCCCCCCHHHHHHHHHCCCcC-C-----------------------------------------------CCccCCHHHH
Confidence            999765543333222211100 0                                               0012456789


Q ss_pred             HHHhhccccCCCCCcCHHHHhc
Q 017021          347 HLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      +++.+||+.||++||++.+++.
T Consensus       242 ~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         242 MIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             HHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999999999984

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=8.1e-38  Score=317.10  Aligned_cols=144  Identities=22%  Similarity=0.333  Sum_probs=127.1

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ..|++.++||.|+||.||+|++..+++.||+|+++...    .....+..|+.++..+     .|++|+.++..+....+
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~Iv~~~~~~~~~~~   78 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS-----KSPFIVHLYYSLQSANN   78 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc-----CCCCcCeEEEEEEECCE
Confidence            35788899999999999999999999999999997432    2234556677777766     77999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      +|+||||+ +++|.+++....  .+++..++.++.||+.||.|||+.||+||||||+|||+..++.++|+|||++.
T Consensus        79 ~~lVmEy~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          79 VYLVMEYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             EEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            99999999 999999997654  58899999999999999999999999999999999999999999999999874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.8e-37  Score=278.90  Aligned_cols=237  Identities=24%  Similarity=0.358  Sum_probs=184.3

Q ss_pred             hccccccceeEEEEEecCCC---ceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEE
Q 017021           49 SKMGEGTFGQVLECWDRERK---EMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  123 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~---~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~  123 (379)
                      ++||+|+||.||+|.+..++   ..+|+|.+.....  ....+..|+.++..+     .|++++++++++. ....++||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~-~~~~~~v~   74 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL-----DHPCIVRLIGVCK-GEPLMLVM   74 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhc-----CCCCeeeEEEEEc-CCceEEEE
Confidence            47999999999999876554   7899999875433  455677788888887     6789999998775 45689999


Q ss_pred             eCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          124 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       124 e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      ||+ +++|.+++....  .+++..+..++.|++.||+|||+.|++||||||+||+++.+                     
T Consensus        75 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~---------------------  131 (257)
T cd05060          75 ELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNR---------------------  131 (257)
T ss_pred             EeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCC---------------------
Confidence            999 889999998765  68999999999999999999999999999999999999544                     


Q ss_pred             ccCCCCCCeEEeecCcccccCCCCCc------ccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchH
Q 017021          203 KRMPKSSAIKVIDFGSTTYERPDQNY------IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  275 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~~~~~------~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~  275 (379)
                            +.++|+|||.+.........      ..++..|+|||.+.+..++.++|||||||++|++++ |..||...+..
T Consensus       132 ------~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~  205 (257)
T cd05060         132 ------HQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA  205 (257)
T ss_pred             ------CcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH
Confidence                  45566666655433222211      123457999999988889999999999999999998 99999765544


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.+...                      ..                          .....+..+.++|.+||..
T Consensus       206 ~~~~~~~~~~~----------------------~~--------------------------~~~~~~~~l~~li~~cl~~  237 (257)
T cd05060         206 EVIAMLESGER----------------------LP--------------------------RPEECPQEIYSIMLSCWKY  237 (257)
T ss_pred             HHHHHHHcCCc----------------------CC--------------------------CCCCCCHHHHHHHHHHhcC
Confidence            33322221100                      00                          0123567899999999999


Q ss_pred             CCCCCcCHHHHhc
Q 017021          356 DPTDRLTAREALR  368 (379)
Q Consensus       356 dP~~Rpta~e~l~  368 (379)
                      ||++|||+.++++
T Consensus       238 ~p~~Rp~~~~l~~  250 (257)
T cd05060         238 RPEDRPTFSELES  250 (257)
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999974

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=1.6e-37  Score=285.76  Aligned_cols=247  Identities=22%  Similarity=0.339  Sum_probs=190.9

Q ss_pred             hhhhhhhhccccccceeEEEEEec-----CCCceEEEEEeeccch-hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      ...|.+.+.||+|+||.||+|.+.     .++..+|+|.+..... ....+.+|+..+..+     .|++++++++++..
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~   78 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL-----QHEHIVKFYGVCGD   78 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcC-----CCCCcceEEEEEcc
Confidence            345778899999999999999854     3456799999874332 234566788888877     77999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEec
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  180 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~--------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~  180 (379)
                      ....++||||+ +++|.+++....              ...+++..++.++.||+.||+|||+.|++||||||+||+++.
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~  158 (291)
T cd05094          79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA  158 (291)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc
Confidence            99999999999 999999997642              124788999999999999999999999999999999999954


Q ss_pred             ccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhH
Q 017021          181 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSV  255 (379)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSl  255 (379)
                                                 +..++|+|||.+.......     ....++..|+|||.+.+..++.++|||||
T Consensus       159 ---------------------------~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  211 (291)
T cd05094         159 ---------------------------NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF  211 (291)
T ss_pred             ---------------------------CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHH
Confidence                                       4456666666654322211     22345778999999998889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHH
Q 017021          256 GCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI  334 (379)
Q Consensus       256 G~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (379)
                      ||++|+|++ |..||...+..+....+...  ..+                    .                        
T Consensus       212 G~il~el~t~g~~p~~~~~~~~~~~~~~~~--~~~--------------------~------------------------  245 (291)
T cd05094         212 GVILWEIFTYGKQPWFQLSNTEVIECITQG--RVL--------------------E------------------------  245 (291)
T ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHHHhCC--CCC--------------------C------------------------
Confidence            999999998 99999765544332221110  000                    0                        


Q ss_pred             HHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       335 ~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                        .....+..+.+++.+||+.||++|||++++++
T Consensus       246 --~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         246 --RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             --CCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence              01124567999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=2.5e-37  Score=279.81  Aligned_cols=247  Identities=25%  Similarity=0.356  Sum_probs=192.2

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      +....|++.++||+|+||.||++.+. .+..+|+|.+.........+.+|+.+++.+     +|++++++++.+.. ...
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~-~~~   75 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-----QHDKLVKLHAVVTK-EPI   75 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhc-----CCCCcceEEEEEcC-CCe
Confidence            34567889999999999999999865 456699999875554456677898888887     67899999988877 778


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      +++|||+ +++|.+++.......++...+..++.|++.||.|||+.|++|+||+|+||+++.                  
T Consensus        76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~------------------  137 (260)
T cd05073          76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA------------------  137 (260)
T ss_pred             EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC------------------
Confidence            9999999 889999998765456888899999999999999999999999999999999944                  


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCc
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  273 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~  273 (379)
                               ...++|+|||.+.......    ....++..|+|||.+....++.++|+|||||++|++++ |+.||...+
T Consensus       138 ---------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~  208 (260)
T cd05073         138 ---------SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS  208 (260)
T ss_pred             ---------CCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC
Confidence                     4456666666554322111    11234567999999988888999999999999999998 999997655


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      .......+.+....                                                ...+..+.++.+++.+||
T Consensus       209 ~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~i~~~l  240 (260)
T cd05073         209 NPEVIRALERGYRM------------------------------------------------PRPENCPEELYNIMMRCW  240 (260)
T ss_pred             HHHHHHHHhCCCCC------------------------------------------------CCcccCCHHHHHHHHHHc
Confidence            43333222111000                                                001235568999999999


Q ss_pred             ccCCCCCcCHHHHhc
Q 017021          354 RYDPTDRLTAREALR  368 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~  368 (379)
                      +.||++||++.++++
T Consensus       241 ~~~p~~Rp~~~~l~~  255 (260)
T cd05073         241 KNRPEERPTFEYIQS  255 (260)
T ss_pred             ccCcccCcCHHHHHH
Confidence            999999999998864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=6.4e-38  Score=279.94  Aligned_cols=228  Identities=26%  Similarity=0.381  Sum_probs=181.4

Q ss_pred             ccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-CCCHHH
Q 017021           54 GTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYD  132 (379)
Q Consensus        54 G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~sL~~  132 (379)
                      |.+|.||+++++.+++.||+|.+......    ..|...+...     .|++++.+++.+......+++|||+ +++|.+
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~----~~~~~~~~~~-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   74 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSEY----SRERLTIIPH-----CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS   74 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhhh----hhHHHHHHhc-----CCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence            89999999999999999999999754321    1233222222     5789999999999999999999999 899999


Q ss_pred             HHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeE
Q 017021          133 FLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK  212 (379)
Q Consensus       133 ~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (379)
                      ++.+..  .+++..+..++.|++.||.|||+.|++||||||+||++                           +.++.++
T Consensus        75 ~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~---------------------------~~~~~~~  125 (237)
T cd05576          75 HISKFL--NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILL---------------------------DDRGHIQ  125 (237)
T ss_pred             HHHHhc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---------------------------cCCCCEE
Confidence            987754  58999999999999999999999999999999999999                           4556678


Q ss_pred             EeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhH
Q 017021          213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHM  292 (379)
Q Consensus       213 l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  292 (379)
                      ++|||.+...........++..|+|||...+..++.++|+||+|+++|+|++|..|+....... .        .     
T Consensus       126 l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-~--------~-----  191 (237)
T cd05576         126 LTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-N--------T-----  191 (237)
T ss_pred             EecccchhccccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-c--------c-----
Confidence            8888876655444444456778999999988888999999999999999999998774311100 0        0     


Q ss_pred             HHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCH-----HHHh
Q 017021          293 LKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA-----REAL  367 (379)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta-----~e~l  367 (379)
                                   .....                          ..+..+..++++|.+||+.||++|||+     +|++
T Consensus       192 -------------~~~~~--------------------------~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~  232 (237)
T cd05576         192 -------------HTTLN--------------------------IPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIK  232 (237)
T ss_pred             -------------ccccC--------------------------CcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHH
Confidence                         00000                          112356789999999999999999996     9999


Q ss_pred             cCCCC
Q 017021          368 RHPFF  372 (379)
Q Consensus       368 ~hp~f  372 (379)
                      +||||
T Consensus       233 ~h~~~  237 (237)
T cd05576         233 SHPFF  237 (237)
T ss_pred             cCCCC
Confidence            99998

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=2.3e-37  Score=281.73  Aligned_cols=244  Identities=18%  Similarity=0.255  Sum_probs=184.2

Q ss_pred             hhhhccccccceeEEEEEecCCCc--eEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee-----
Q 017021           46 KIHSKMGEGTFGQVLECWDRERKE--MVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-----  115 (379)
Q Consensus        46 ~i~~~Lg~G~~g~V~~~~~~~~~~--~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~-----  115 (379)
                      .|.+.||+|+||.||+|.+..++.  .||+|.++..   ......+..|..++..+     .|+|++++++.+..     
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~   76 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEF-----DHPNVMRLIGVCLQTVESE   76 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEccCCccc
Confidence            467899999999999999877765  6999998643   23345566788888877     77899999876532     


Q ss_pred             -cceEEEEEeCC-CCCHHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCC
Q 017021          116 -RNHICIVFEKL-GSSLYDFLRKN----NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       116 -~~~~~lv~e~~-~~sL~~~l~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                       ....+++|||+ +++|.+++...    ....+++..+..++.|++.||+|||+.|++||||||+||+++          
T Consensus        77 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~----------  146 (272)
T cd05075          77 GYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLN----------  146 (272)
T ss_pred             CCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEc----------
Confidence             23578999999 89999887432    123478999999999999999999999999999999999994          


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~  264 (379)
                                       .+..++|+|||.+.......     ....+++.|+|||.+.+..++.++|||||||++|+|++
T Consensus       147 -----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~  209 (272)
T cd05075         147 -----------------ENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIAT  209 (272)
T ss_pred             -----------------CCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHc
Confidence                             44556666666665432211     12235678999999998889999999999999999999


Q ss_pred             -CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchh
Q 017021          265 -GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  343 (379)
Q Consensus       265 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (379)
                       |..||.+....+....+.+...  +                    .                          .....+.
T Consensus       210 ~g~~p~~~~~~~~~~~~~~~~~~--~--------------------~--------------------------~~~~~~~  241 (272)
T cd05075         210 RGQTPYPGVENSEIYDYLRQGNR--L--------------------K--------------------------QPPDCLD  241 (272)
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCC--C--------------------C--------------------------CCCCCCH
Confidence             8999976554433322221100  0                    0                          0113456


Q ss_pred             HHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          344 DLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       344 ~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      .+.++|.+||+.||++|||+.+++++
T Consensus       242 ~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         242 GLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            78999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.6e-37  Score=286.43  Aligned_cols=256  Identities=23%  Similarity=0.325  Sum_probs=191.5

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCC--------------ceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCC
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERK--------------EMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGG  103 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~--------------~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~  103 (379)
                      ++...|++.++||+|+||.||+|++..++              ..||+|.++..  ......+.+|++++.++     .|
T Consensus         2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l-----~h   76 (295)
T cd05097           2 FPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRL-----KN   76 (295)
T ss_pred             CchHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhC-----CC
Confidence            34567899999999999999999875432              35999998743  22334567799988888     77


Q ss_pred             CeeEEecceeeecceEEEEEeCC-CCCHHHHHHhCCC----------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Q 017021          104 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNY----------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLK  172 (379)
Q Consensus       104 ~~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~----------~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlk  172 (379)
                      ++++++++++...+..++||||+ +++|.+++.....          ..+++..+..++.|++.||+|||+.|++|||||
T Consensus        77 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlk  156 (295)
T cd05097          77 PNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLA  156 (295)
T ss_pred             CCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccC
Confidence            99999999999999999999999 8999999865321          136788899999999999999999999999999


Q ss_pred             CCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCC
Q 017021          173 PENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWT  247 (379)
Q Consensus       173 p~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~  247 (379)
                      |+||+++.                           +..++|+|||.+.......     ....++..|+|||.+.+..++
T Consensus       157 p~Nill~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  209 (295)
T cd05097         157 TRNCLVGN---------------------------HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFT  209 (295)
T ss_pred             hhhEEEcC---------------------------CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcC
Confidence            99999954                           4456666666654322111     112346789999999888899


Q ss_pred             CccchHhHHHHHHHHHh--CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhc
Q 017021          248 YPCDIWSVGCILVELCT--GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM  325 (379)
Q Consensus       248 ~~sDvwSlG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (379)
                      .++|+|||||++|+|++  +..||...+..+....+.+.....                  +.....             
T Consensus       210 ~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~------------------~~~~~~-------------  258 (295)
T cd05097         210 TASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQ------------------GRQIYL-------------  258 (295)
T ss_pred             chhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhc------------------cccccC-------------
Confidence            99999999999999988  677887655444333222211000                  000000             


Q ss_pred             cchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          326 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                                ......+..+.+++.+||+.||++|||++++++
T Consensus       259 ----------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         259 ----------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             ----------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                      001124578999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=2.6e-37  Score=286.67  Aligned_cols=250  Identities=20%  Similarity=0.283  Sum_probs=190.7

Q ss_pred             chhhhhhhhccccccceeEEEEEecC-------CCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRE-------RKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~-------~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      ..-.|.+.+.||+|+||.||+|.+..       ++..+|+|.++...  .....+..|+.++..+    ..|++++++++
T Consensus        16 ~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l----~~h~~i~~~~~   91 (307)
T cd05098          16 PRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI----GKHKNIINLLG   91 (307)
T ss_pred             ehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHh----cCCCCEeeEEE
Confidence            34578999999999999999998643       23579999997432  2234566677777776    24689999999


Q ss_pred             eeeecceEEEEEeCC-CCCHHHHHHhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcE
Q 017021          112 WFDYRNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENV  176 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~~sL~~~l~~~~--------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Ni  176 (379)
                      .+...+..|+||||+ +++|.+++....              ...++..+++.++.|++.||+|||+.|++||||||+||
T Consensus        92 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni  171 (307)
T cd05098          92 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNV  171 (307)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHhe
Confidence            999999999999999 889999997642              12478899999999999999999999999999999999


Q ss_pred             EEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccc
Q 017021          177 LLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCD  251 (379)
Q Consensus       177 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sD  251 (379)
                      +++.                           ++.++|+|||.+.......     ....++..|+|||.+.+..++.++|
T Consensus       172 ll~~---------------------------~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  224 (307)
T cd05098         172 LVTE---------------------------DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD  224 (307)
T ss_pred             EEcC---------------------------CCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHH
Confidence            9944                           4456667776664332111     1112346799999998888999999


Q ss_pred             hHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhh
Q 017021          252 IWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL  330 (379)
Q Consensus       252 vwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (379)
                      +|||||++|+|++ |..||......+....+.....                      .+.                   
T Consensus       225 vwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~----------------------~~~-------------------  263 (307)
T cd05098         225 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR----------------------MDK-------------------  263 (307)
T ss_pred             HHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCC----------------------CCC-------------------
Confidence            9999999999998 8899876544333322211100                      000                   


Q ss_pred             HHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       331 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                             ....+.++.+++.+||..+|++|||+.+++++
T Consensus       264 -------~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         264 -------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             -------CCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence                   11356789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=2.6e-37  Score=278.76  Aligned_cols=244  Identities=25%  Similarity=0.373  Sum_probs=192.7

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  123 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~  123 (379)
                      .|++.+.||+|+||.||++.+.. +..+|+|++.........+..|+.++.++     .|++++++++.+......+++|
T Consensus         5 ~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~v~   78 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAMSEEDFIEEAQVMMKL-----SHPKLVQLYGVCTERSPICLVF   78 (256)
T ss_pred             HeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCCCCHHHHHHHHHHHHhC-----CCCCeeeEEEEEccCCceEEEE
Confidence            56778999999999999998754 67899999875544456677899988887     6789999999999999999999


Q ss_pred             eCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          124 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       124 e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      ||+ +++|.+++.... ..++++.+..++.|++.||++||+.|++|+||||+||+++                       
T Consensus        79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~-----------------------  134 (256)
T cd05112          79 EFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG-----------------------  134 (256)
T ss_pred             EcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc-----------------------
Confidence            999 899999987653 2578999999999999999999999999999999999994                       


Q ss_pred             ccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHH
Q 017021          203 KRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  277 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~  277 (379)
                          .+..++|+|||.+.......    ....++..|+|||.+.+..++.++|+||||+++|+|++ |..||......+.
T Consensus       135 ----~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~  210 (256)
T cd05112         135 ----ENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEV  210 (256)
T ss_pred             ----CCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence                44556777777665322211    11234568999999988889999999999999999998 9999976554443


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.+......                                                ....+..+.+++.+||+.||
T Consensus       211 ~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~l~~~~l~~~p  242 (256)
T cd05112         211 VETINAGFRLYK------------------------------------------------PRLASQSVYELMQHCWKERP  242 (256)
T ss_pred             HHHHhCCCCCCC------------------------------------------------CCCCCHHHHHHHHHHcccCh
Confidence            332221100000                                                01245679999999999999


Q ss_pred             CCCcCHHHHhcC
Q 017021          358 TDRLTAREALRH  369 (379)
Q Consensus       358 ~~Rpta~e~l~h  369 (379)
                      ++|||+.+++++
T Consensus       243 ~~Rp~~~~~l~~  254 (256)
T cd05112         243 EDRPSFSLLLHQ  254 (256)
T ss_pred             hhCCCHHHHHHh
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=5.5e-38  Score=284.11  Aligned_cols=242  Identities=27%  Similarity=0.402  Sum_probs=187.8

Q ss_pred             hhhccccccceeEEEEEec----CCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           47 IHSKMGEGTFGQVLECWDR----ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        47 i~~~Lg~G~~g~V~~~~~~----~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      +.+.||.|.||.||+|.+.    ..+..|+||.++..  ......+.+|++.+.++     .|+|++++++++...+..+
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-----~h~ni~~~~g~~~~~~~~~   77 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-----RHPNIVKLYGFCIENEPLF   77 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-----SBTTBE-EEEEEESSSSEE
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc-----ccccccccccccccccccc
Confidence            4588999999999999887    45688999999642  22357778899888888     7799999999999888899


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +|+||+ +++|.+++.......++......++.||+.||.|||+.+++||+|+++||+++                    
T Consensus        78 lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~--------------------  137 (259)
T PF07714_consen   78 LVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD--------------------  137 (259)
T ss_dssp             EEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE--------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------------------
Confidence            999999 78999999987445799999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCc
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  273 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~  273 (379)
                             .+..+||+|||.+.......     ....+...|+|||.+.+..++.++||||||+++||+++ |+.||...+
T Consensus       138 -------~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~  210 (259)
T PF07714_consen  138 -------SNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD  210 (259)
T ss_dssp             -------TTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC
T ss_pred             -------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                   45567777777665442211     12345678999999988889999999999999999999 789998766


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.+.....                                                ....++..+.++|.+||
T Consensus       211 ~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~li~~C~  242 (259)
T PF07714_consen  211 NEEIIEKLKQGQRLP------------------------------------------------IPDNCPKDIYSLIQQCW  242 (259)
T ss_dssp             HHHHHHHHHTTEETT------------------------------------------------SBTTSBHHHHHHHHHHT
T ss_pred             cccccccccccccce------------------------------------------------eccchhHHHHHHHHHHc
Confidence            655444442221110                                                11235678999999999


Q ss_pred             ccCCCCCcCHHHHhc
Q 017021          354 RYDPTDRLTAREALR  368 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~  368 (379)
                      ..||++|||+.++++
T Consensus       243 ~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  243 SHDPEKRPSFQEILQ  257 (259)
T ss_dssp             -SSGGGS--HHHHHH
T ss_pred             CCChhhCcCHHHHHh
Confidence            999999999999974

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=3.6e-37  Score=277.69  Aligned_cols=243  Identities=25%  Similarity=0.345  Sum_probs=192.6

Q ss_pred             hhhhccccccceeEEEEEecCCC----ceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           46 KIHSKMGEGTFGQVLECWDRERK----EMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        46 ~i~~~Lg~G~~g~V~~~~~~~~~----~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ++.+.||.|+||.||++.+..++    ..||+|++.....  ....+..|+..+..+     +|++++++++.+.+.+..
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~   76 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKL-----DHPNIVKLLGVCTEEEPL   76 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhc-----CCCchheEEEEEcCCCee
Confidence            56789999999999999998766    8999999975433  455677788888877     678999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      +++||++ +++|.+++.......+++..+..++.|++.||++||+.|++|+||+|+||+++.                  
T Consensus        77 ~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~------------------  138 (258)
T smart00219       77 MIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGE------------------  138 (258)
T ss_pred             EEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEcc------------------
Confidence            9999999 899999998755333899999999999999999999999999999999999954                  


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCCC----cccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCc
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQN----YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  273 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~  273 (379)
                               ++.++|+|||.+........    ...++..|+|||.+.+..++.++|+||||+++|+|++ |..||...+
T Consensus       139 ---------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~  209 (258)
T smart00219      139 ---------NLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS  209 (258)
T ss_pred             ---------CCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Confidence                     44566666666653332211    1125678999999988888999999999999999998 888887655


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      .......+.+....                      ..                          ....+.++.+++.+||
T Consensus       210 ~~~~~~~~~~~~~~----------------------~~--------------------------~~~~~~~~~~~i~~~l  241 (258)
T smart00219      210 NEEVLEYLKKGYRL----------------------PK--------------------------PENCPPEIYKLMLQCW  241 (258)
T ss_pred             HHHHHHHHhcCCCC----------------------CC--------------------------CCcCCHHHHHHHHHHC
Confidence            44433322221100                      00                          0124678999999999


Q ss_pred             ccCCCCCcCHHHHhc
Q 017021          354 RYDPTDRLTAREALR  368 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~  368 (379)
                      ..||++|||+.|+++
T Consensus       242 ~~~p~~Rpt~~~ll~  256 (258)
T smart00219      242 AEDPEDRPTFSELVE  256 (258)
T ss_pred             cCChhhCcCHHHHHh
Confidence            999999999999985

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=9.1e-38  Score=282.42  Aligned_cols=245  Identities=24%  Similarity=0.332  Sum_probs=187.3

Q ss_pred             hccccccceeEEEEEecCCCc-------eEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           49 SKMGEGTFGQVLECWDRERKE-------MVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~-------~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      +.||+|+||.||+|.++.++.       .+|+|.+.... .....+..|..++..+     .|+|++++++++..+...+
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~-----~h~~iv~~~~~~~~~~~~~   75 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQL-----SHKHLVLNYGVCVCGDESI   75 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhC-----CCCChhheeeEEEeCCCcE
Confidence            468999999999998866544       48899886432 2234556677777766     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|.+++.... ..+++..+..++.||+.||+|||+.|++||||||+||+++.++..++.+           
T Consensus        76 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~-----------  143 (258)
T cd05078          76 MVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGN-----------  143 (258)
T ss_pred             EEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCC-----------
Confidence            999999 899999997654 2588999999999999999999999999999999999997765443322           


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCC-CCCCCCchHHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGE-ALFQTHENLEH  277 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~-~pf~~~~~~~~  277 (379)
                              ...++++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++|+|++|. .||...+....
T Consensus       144 --------~~~~~l~d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~  214 (258)
T cd05078         144 --------PPFIKLSDPGISITVLPK-EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK  214 (258)
T ss_pred             --------CceEEecccccccccCCc-hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH
Confidence                    234789999988654432 23467889999999876 45789999999999999999984 66654333221


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      .. ........                                                 ....+.++.++|.+||+.||
T Consensus       215 ~~-~~~~~~~~-------------------------------------------------~~~~~~~~~~li~~~l~~~p  244 (258)
T cd05078         215 LQ-FYEDRHQL-------------------------------------------------PAPKWTELANLINQCMDYEP  244 (258)
T ss_pred             HH-HHHccccC-------------------------------------------------CCCCcHHHHHHHHHHhccCh
Confidence            11 11000000                                                 11234678999999999999


Q ss_pred             CCCcCHHHHhcC
Q 017021          358 TDRLTAREALRH  369 (379)
Q Consensus       358 ~~Rpta~e~l~h  369 (379)
                      ++|||++++++.
T Consensus       245 ~~Rps~~~il~~  256 (258)
T cd05078         245 DFRPSFRAIIRD  256 (258)
T ss_pred             hhCCCHHHHHHh
Confidence            999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=3e-37  Score=283.52  Aligned_cols=254  Identities=24%  Similarity=0.405  Sum_probs=193.5

Q ss_pred             hhhhhccccccceeEEEEEec---CCCceEEEEEeeccc-----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           45 DKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGIK-----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      |++.+.||+|++|.||++++.   .+++.||+|+++...     .....+..|+.++.++    .+|++++.+++.+..+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~----~~~~~i~~~~~~~~~~   77 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAV----RRCPFLVTLHYAFQTD   77 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhc----cCCcchhhhheeeecC
Confidence            678899999999999999864   467889999987422     2234455677777776    3578999999999999


Q ss_pred             ceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          117 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       117 ~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      ...++||||+ +++|.+.+....  .+++..+..++.|++.||.|||+.|++||||+|+||++                 
T Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~-----------------  138 (288)
T cd05583          78 TKLHLILDYVNGGELFTHLYQRE--HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL-----------------  138 (288)
T ss_pred             CEEEEEEecCCCCcHHHHHhhcC--CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE-----------------
Confidence            9999999999 889999987654  58899999999999999999999999999999999999                 


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCC--CCCccchHhHHHHHHHHHhCCCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLG--WTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                                +.++.++|+|||.+.......    ....|+..|+|||.+.+..  .+.++|+||||+++|+|++|..||
T Consensus       139 ----------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~  208 (288)
T cd05583         139 ----------DSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPF  208 (288)
T ss_pred             ----------CCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCc
Confidence                      445567788888765433222    1235788999999987654  678999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      ...........+.+.                   ......+.                          ....+..+.++|
T Consensus       209 ~~~~~~~~~~~~~~~-------------------~~~~~~~~--------------------------~~~~~~~l~~li  243 (288)
T cd05583         209 TVDGEQNSQSEISRR-------------------ILKSKPPF--------------------------PKTMSAEARDFI  243 (288)
T ss_pred             ccCcccchHHHHHHH-------------------HHccCCCC--------------------------CcccCHHHHHHH
Confidence            643221111111000                   00000000                          112456789999


Q ss_pred             hhccccCCCCCcC---HHHHhcCCCCCCCC
Q 017021          350 QGLLRYDPTDRLT---AREALRHPFFTRDH  376 (379)
Q Consensus       350 ~~~L~~dP~~Rpt---a~e~l~hp~f~~~~  376 (379)
                      .+||+.||++|||   +.++++||||+..+
T Consensus       244 ~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~  273 (288)
T cd05583         244 QKLLEKDPKKRLGANGADEIKNHPFFQGID  273 (288)
T ss_pred             HHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence            9999999999998   56779999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=3.8e-37  Score=279.69  Aligned_cols=245  Identities=21%  Similarity=0.304  Sum_probs=189.3

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCc---eEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKE---MVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~---~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      ..|...+.||+|+||.||+|.++.+++   .+|+|.+...  ......+..|+.++..+     .|++++++.+++...+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   79 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQF-----SHHNIIRLEGVVTKFK   79 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcC-----CCCCeeEEEEEEccCC
Confidence            356677999999999999999876654   7999998643  23345566777777766     6789999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+.|++|||+||+||+++.+               
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~---------------  143 (268)
T cd05063          80 PAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSN---------------  143 (268)
T ss_pred             CcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCC---------------
Confidence            999999999 889999987653 358999999999999999999999999999999999999544               


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCCC------cccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCC
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQN------YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALF  269 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf  269 (379)
                                  ..++|+|||.+........      ....+..|+|||.+.+..++.++|||||||++|++++ |+.||
T Consensus       144 ------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~  211 (268)
T cd05063         144 ------------LECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPY  211 (268)
T ss_pred             ------------CcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCC
Confidence                        4456666665543222111      0112356999999988889999999999999999997 99999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      ...+..+....+.+.. ..|.                                               ....+.++.+++
T Consensus       212 ~~~~~~~~~~~i~~~~-~~~~-----------------------------------------------~~~~~~~~~~li  243 (268)
T cd05063         212 WDMSNHEVMKAINDGF-RLPA-----------------------------------------------PMDCPSAVYQLM  243 (268)
T ss_pred             CcCCHHHHHHHHhcCC-CCCC-----------------------------------------------CCCCCHHHHHHH
Confidence            7655544433332211 1110                                               012456789999


Q ss_pred             hhccccCCCCCcCHHHHhc
Q 017021          350 QGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~  368 (379)
                      .+||+.||++||++.++++
T Consensus       244 ~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         244 LQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             HHHcCCCcccCcCHHHHHH
Confidence            9999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=3.7e-37  Score=290.04  Aligned_cols=252  Identities=22%  Similarity=0.321  Sum_probs=188.9

Q ss_pred             echhhhhhhhccccccceeEEEEEe-----cCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWD-----RERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~-----~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      +....|++.+.||+|+||.||+|.+     ..+++.||+|+++...  .....+.+|+.++.++.    +|+|+++++++
T Consensus         4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~niv~~~~~   79 (343)
T cd05103           4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG----HHLNVVNLLGA   79 (343)
T ss_pred             cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhcc----CCccHhhhcce
Confidence            4556799999999999999999984     3567899999997432  23345677888888872    56889999987


Q ss_pred             eee-cceEEEEEeCC-CCCHHHHHHhCCC---------------------------------------------------
Q 017021          113 FDY-RNHICIVFEKL-GSSLYDFLRKNNY---------------------------------------------------  139 (379)
Q Consensus       113 ~~~-~~~~~lv~e~~-~~sL~~~l~~~~~---------------------------------------------------  139 (379)
                      +.. +...+++|||+ +++|.+++.....                                                   
T Consensus        80 ~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (343)
T cd05103          80 CTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS  159 (343)
T ss_pred             eecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence            754 45689999999 9999999865321                                                   


Q ss_pred             --------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccC
Q 017021          140 --------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  205 (379)
Q Consensus       140 --------------~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (379)
                                    ..++...+..++.|++.||.|||+.|++||||||+||+++                          
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~--------------------------  213 (343)
T cd05103         160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS--------------------------  213 (343)
T ss_pred             cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc--------------------------
Confidence                          1357778889999999999999999999999999999994                          


Q ss_pred             CCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHHHH
Q 017021          206 PKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  279 (379)
Q Consensus       206 ~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~  279 (379)
                       .+..++|+|||.+.......     ....++..|+|||.+.+..++.++||||||+++|+|++ |..||......+...
T Consensus       214 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~  292 (343)
T cd05103         214 -ENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC  292 (343)
T ss_pred             -CCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHH
Confidence             45567777777765432211     11234567999999988889999999999999999997 999987543221111


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                      ....                     .......+                          ...++++.+++..||+.||++
T Consensus       293 ~~~~---------------------~~~~~~~~--------------------------~~~~~~~~~~~~~cl~~~p~~  325 (343)
T cd05103         293 RRLK---------------------EGTRMRAP--------------------------DYTTPEMYQTMLDCWHGEPSQ  325 (343)
T ss_pred             HHHh---------------------ccCCCCCC--------------------------CCCCHHHHHHHHHHccCChhh
Confidence            1000                     00000000                          113457889999999999999


Q ss_pred             CcCHHHHhcC
Q 017021          360 RLTAREALRH  369 (379)
Q Consensus       360 Rpta~e~l~h  369 (379)
                      |||+.|+++|
T Consensus       326 Rps~~eil~~  335 (343)
T cd05103         326 RPTFSELVEH  335 (343)
T ss_pred             CcCHHHHHHH
Confidence            9999999976

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=4.8e-37  Score=282.46  Aligned_cols=244  Identities=19%  Similarity=0.310  Sum_probs=188.6

Q ss_pred             hhhhhccccccceeEEEEEecC-----CCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           45 DKIHSKMGEGTFGQVLECWDRE-----RKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      |++.+.||+|+||.||+|.+..     ....+|+|.+....  .....+..|+.++..+     .|+|++++++.+...+
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~   76 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV-----NHPHVIKLYGACSQDG   76 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhC-----CCCCEeeEEEEEecCC
Confidence            6788999999999999998753     23579999886432  2234566788888887     7899999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNN----------------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPE  174 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~  174 (379)
                      ..++++||+ +++|.+++....                      ...+++..+..++.|++.||.|||+.|++||||||+
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~  156 (290)
T cd05045          77 PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAAR  156 (290)
T ss_pred             CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhh
Confidence            999999999 899999986421                      124778899999999999999999999999999999


Q ss_pred             cEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCc
Q 017021          175 NVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYP  249 (379)
Q Consensus       175 Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~  249 (379)
                      ||++.                           .+..++|+|||.+.......     ....++..|+|||.+.+..++.+
T Consensus       157 nill~---------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~  209 (290)
T cd05045         157 NVLVA---------------------------EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQ  209 (290)
T ss_pred             eEEEc---------------------------CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchH
Confidence            99994                           44556777777665322211     12235668999999988889999


Q ss_pred             cchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccch
Q 017021          250 CDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP  328 (379)
Q Consensus       250 sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (379)
                      +||||||+++|+|++ |..||.+....+....+.+....                      +                  
T Consensus       210 ~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------------------~------------------  249 (290)
T cd05045         210 SDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRM----------------------E------------------  249 (290)
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC----------------------C------------------
Confidence            999999999999998 99999765543333222111000                      0                  


Q ss_pred             hhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          329 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                              .....+.++.+++.+||+.||++||+++++++
T Consensus       250 --------~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         250 --------RPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             --------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence                    01235578999999999999999999999974

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-38  Score=295.50  Aligned_cols=252  Identities=23%  Similarity=0.311  Sum_probs=199.3

Q ss_pred             eeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeec---cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           36 TYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        36 ~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      ++-.+......+.++||+|.||+||+|++-.   .||||+++-   .+..-+.+..|+.++.+-     -|.||+-+.++
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkT-----RH~NIlLFMG~  456 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKT-----RHENILLFMGA  456 (678)
T ss_pred             cccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhc-----chhhheeeehh
Confidence            4556666677899999999999999998754   399999973   344667788899999887     56899999999


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                      +..+.. .||+.+| |.+|+.++.... ..+.....+.|+.|+++|+.|||.++|||||||..||++             
T Consensus       457 ~~~p~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl-------------  521 (678)
T KOG0193|consen  457 CMNPPL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL-------------  521 (678)
T ss_pred             hcCCce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE-------------
Confidence            999888 9999999 889999998755 358899999999999999999999999999999999999             


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhC---CCCCCccchHhHHHHHHHHH
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELC  263 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~il~~l~  263 (379)
                                    ..++.++|+|||++.......     ....|...|+|||++..   .+|++++||||||+++|||+
T Consensus       522 --------------~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELl  587 (678)
T KOG0193|consen  522 --------------HEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELL  587 (678)
T ss_pred             --------------ccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHH
Confidence                          555778888888775433222     23467889999999864   46999999999999999999


Q ss_pred             hCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchh
Q 017021          264 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  343 (379)
Q Consensus       264 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (379)
                      +|..||...+......++-+  |.+..+.                                          -.....+..
T Consensus       588 tg~lPysi~~~dqIifmVGr--G~l~pd~------------------------------------------s~~~s~~pk  623 (678)
T KOG0193|consen  588 TGELPYSIQNRDQIIFMVGR--GYLMPDL------------------------------------------SKIRSNCPK  623 (678)
T ss_pred             hCcCCcCCCChhheEEEecc--cccCccc------------------------------------------hhhhccCHH
Confidence            99999985444333222211  1111110                                          011123566


Q ss_pred             HHHHHHhhccccCCCCCcCHHHHhc
Q 017021          344 DLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       344 ~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      ++++|+..||.+++++||...++|.
T Consensus       624 ~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  624 AMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             HHHHHHHHHHhcCcccCccHHHHHH
Confidence            8999999999999999999999886

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=5.5e-37  Score=280.59  Aligned_cols=246  Identities=20%  Similarity=0.208  Sum_probs=183.6

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCc----eEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKE----MVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~----~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      ....|++.+.||+|+||.||+|.+..+++    .+|+|.+.....  ....+..|+..+..+     .|+|++++++++.
T Consensus         5 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-----~h~~iv~~~~~~~   79 (279)
T cd05111           5 KETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSL-----DHAYIVRLLGICP   79 (279)
T ss_pred             CHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcC-----CCCCcceEEEEEC
Confidence            34567888999999999999999877766    477787753211  122334444455444     7899999999875


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      . ...++++||+ +++|.+++.... ..+++..+..++.||+.||.|||+.|++||||||+||+++              
T Consensus        80 ~-~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~--------------  143 (279)
T cd05111          80 G-ASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLK--------------  143 (279)
T ss_pred             C-CccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc--------------
Confidence            4 4578899999 899999997654 3589999999999999999999999999999999999994              


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEA  267 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~  267 (379)
                                   .+..++|+|||.+.......     ....++..|+|||.+.+..++.++|||||||++|++++ |..
T Consensus       144 -------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~  210 (279)
T cd05111         144 -------------SDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAE  210 (279)
T ss_pred             -------------CCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCC
Confidence                         44556677777665332211     12345678999999988889999999999999999998 999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ||.+....+....+.+.  ..+                    ..                          ....+.++.+
T Consensus       211 p~~~~~~~~~~~~~~~~--~~~--------------------~~--------------------------~~~~~~~~~~  242 (279)
T cd05111         211 PYAGMRPHEVPDLLEKG--ERL--------------------AQ--------------------------PQICTIDVYM  242 (279)
T ss_pred             CCCCCCHHHHHHHHHCC--CcC--------------------CC--------------------------CCCCCHHHHH
Confidence            99875543332222111  000                    00                          0123456788


Q ss_pred             HHhhccccCCCCCcCHHHHhc
Q 017021          348 LLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~  368 (379)
                      ++.+||..||++|||+.|+++
T Consensus       243 li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         243 VMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             HHHHHcCCCcccCcCHHHHHH
Confidence            999999999999999999975

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=7.2e-37  Score=292.59  Aligned_cols=254  Identities=20%  Similarity=0.277  Sum_probs=193.5

Q ss_pred             eeechhhhhhhhccccccceeEEEEEec-----CCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEec
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIR  110 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~  110 (379)
                      ..+....|.+.++||+|+||.||+|++.     .+++.||+|+++...  .....+..|+.++..+.    .|+|+++++
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~----~H~niv~~~  107 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLG----PHLNIVNLL  107 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcC----CCCCeEEEE
Confidence            3445567888999999999999999864     345789999997432  22345677889888872    378999999


Q ss_pred             ceeeecceEEEEEeCC-CCCHHHHHHhCCC--------------------------------------------------
Q 017021          111 NWFDYRNHICIVFEKL-GSSLYDFLRKNNY--------------------------------------------------  139 (379)
Q Consensus       111 ~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~--------------------------------------------------  139 (379)
                      +.+..++..++||||+ +++|.+++.....                                                  
T Consensus       108 ~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (401)
T cd05107         108 GACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESA  187 (401)
T ss_pred             EEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcccc
Confidence            9999999999999999 9999999965321                                                  


Q ss_pred             ----------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCC
Q 017021          140 ----------------------------------------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKP  173 (379)
Q Consensus       140 ----------------------------------------------~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp  173 (379)
                                                                    ..+++..+..++.||+.||+|||+.+++||||||
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp  267 (401)
T cd05107         188 DYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAA  267 (401)
T ss_pred             CccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCc
Confidence                                                          1356677889999999999999999999999999


Q ss_pred             CcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhhCCCCCC
Q 017021          174 ENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTY  248 (379)
Q Consensus       174 ~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~  248 (379)
                      +||+++                           ....++|+|||.+......     .....++..|+|||.+.+..++.
T Consensus       268 ~NiLl~---------------------------~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  320 (401)
T cd05107         268 RNVLIC---------------------------EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTT  320 (401)
T ss_pred             ceEEEe---------------------------CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCc
Confidence            999994                           4455777777776532211     12235678899999998888999


Q ss_pred             ccchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccc
Q 017021          249 PCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL  327 (379)
Q Consensus       249 ~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (379)
                      ++|||||||++|+|++ |..||......+........ +..                    ..                 
T Consensus       321 ~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~-~~~--------------------~~-----------------  362 (401)
T cd05107         321 LSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKR-GYR--------------------MA-----------------  362 (401)
T ss_pred             HhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHc-CCC--------------------CC-----------------
Confidence            9999999999999998 88998754433222111100 000                    00                 


Q ss_pred             hhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          328 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                               .....+.++.+++.+||..+|.+||+++|+++.
T Consensus       363 ---------~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         363 ---------KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             ---------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                     012356789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-39  Score=275.34  Aligned_cols=284  Identities=29%  Similarity=0.477  Sum_probs=234.4

Q ss_pred             hhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc-----
Q 017021           46 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN-----  117 (379)
Q Consensus        46 ~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~-----  117 (379)
                      +--+.||.|+||.||.+.|..+|+.||+|++.+-   -.......+|+..+..+     .|.|+....+......     
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfF-----kHdNVLSaLDILQPph~dfFq  130 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSF-----RHDNVLSLLDILQPANPSFFQ  130 (449)
T ss_pred             CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhh-----ccccHHHHHHhcCCCCchHHH
Confidence            3447899999999999999999999999998632   22346677899988888     5678888887776543     


Q ss_pred             eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          118 HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       118 ~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .+|+++|++..+|..++-+..  .++...+..+++||+.||.|||+.+|+||||||.|.++                   
T Consensus       131 EiYV~TELmQSDLHKIIVSPQ--~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV-------------------  189 (449)
T KOG0664|consen  131 ELYVLTELMQSDLHKIIVSPQ--ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV-------------------  189 (449)
T ss_pred             HHHHHHHHHHhhhhheeccCC--CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe-------------------
Confidence            478899999889998887654  68899999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCCCc----ccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNY----IVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~----~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                              .+++.+||||||+++..+.....    -+.|..|.|||++.+. .|+.+.||||.|||+.||+.++..|+..
T Consensus       190 --------NSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq  261 (449)
T KOG0664|consen  190 --------NSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAA  261 (449)
T ss_pred             --------ccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhcc
Confidence                    77888999999999876665432    3568899999999774 5999999999999999999999999999


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      ++.+..+.|...+|.++-+.+...++-++..+-++...-|+..-    +   ....        ..++-..+..+++.+|
T Consensus       262 ~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~v----L---Ytls--------S~~~~~heav~~~~~~  326 (449)
T KOG0664|consen  262 GPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQR----L---YKIA--------SPDDKNHEAVDLLQKL  326 (449)
T ss_pred             ChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccc----e---eeec--------CCcccchHHHHHHHHH
Confidence            99999999999999999999999888888888877655554221    0   0000        0112345788899999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCCCCcC
Q 017021          353 LRYDPTDRLTAREALRHPFFTRDHLR  378 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~~~~~  378 (379)
                      |..||++|.+.++++.|++..+-.+|
T Consensus       327 l~~d~dkris~~~A~~~~~~~e~R~r  352 (449)
T KOG0664|consen  327 LHFDPDKRISVEEALQHRYLEEGRLR  352 (449)
T ss_pred             hCCCCcccccHhhhccccccccccee
Confidence            99999999999999999998776554

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=4.5e-37  Score=279.23  Aligned_cols=246  Identities=24%  Similarity=0.331  Sum_probs=190.8

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCC---ceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERK---EMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~---~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      ...|++.+.||+|+||.||+|.++.++   ..+|+|.++..  ......+..|+.++.++     .|+|++++++++..+
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~   77 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQF-----DHPNIIHLEGVVTKS   77 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEecC
Confidence            356788999999999999999887554   37999998643  23345667788888777     789999999999999


Q ss_pred             ceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          117 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       117 ~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      +..|++|||+ +++|.+++.... ..++...+..++.|++.||++||+.|++||||||+||+++.               
T Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~---------------  141 (267)
T cd05066          78 KPVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNS---------------  141 (267)
T ss_pred             CccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECC---------------
Confidence            9999999999 889999998754 35789999999999999999999999999999999999954               


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCCC------cccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN------YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL  268 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~p  268 (379)
                                  +..++|+|||.+........      ...++..|+|||.+.+..++.++|+|||||++|++++ |..|
T Consensus       142 ------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p  209 (267)
T cd05066         142 ------------NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP  209 (267)
T ss_pred             ------------CCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCC
Confidence                        44566666665543322111      1123457999999988889999999999999999886 9999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |......+....+.+... .|                     .                          ....+..+.++
T Consensus       210 ~~~~~~~~~~~~~~~~~~-~~---------------------~--------------------------~~~~~~~~~~l  241 (267)
T cd05066         210 YWEMSNQDVIKAIEEGYR-LP---------------------A--------------------------PMDCPAALHQL  241 (267)
T ss_pred             cccCCHHHHHHHHhCCCc-CC---------------------C--------------------------CCCCCHHHHHH
Confidence            976554433332222110 00                     0                          01245678999


Q ss_pred             HhhccccCCCCCcCHHHHhc
Q 017021          349 LQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~  368 (379)
                      +.+||+.+|.+||++.++++
T Consensus       242 i~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         242 MLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             HHHHcccCchhCCCHHHHHH
Confidence            99999999999999999974

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=4e-37  Score=279.78  Aligned_cols=245  Identities=23%  Similarity=0.349  Sum_probs=190.6

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCc---eEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKE---MVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~---~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      ..|++.+.||+|+||.||+|.++.+++   .||+|.++..  ......+..|+.++..+     .|+|++++.+++..+.
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~ni~~~~~~~~~~~   78 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-----DHPNIIHLEGVVTKSR   78 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-----CCcCcceEEEEECCCC
Confidence            347888999999999999999887664   6999998743  33345677788888877     7899999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..++||||+ +++|.+++.... ..++...+..++.|++.||.|||+.|++|+||||+||+++.                
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~----------------  141 (269)
T cd05065          79 PVMIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNS----------------  141 (269)
T ss_pred             ceEEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcC----------------
Confidence            999999999 889999987654 35899999999999999999999999999999999999944                


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCCC------ccc--ccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCC
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQN------YIV--STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEA  267 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~------~~~--gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~  267 (379)
                                 +..++|+|||.+........      ...  .+..|+|||.+.+..++.++|||||||++|++++ |..
T Consensus       142 -----------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~  210 (269)
T cd05065         142 -----------NLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER  210 (269)
T ss_pred             -----------CCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCC
Confidence                       44566666665543221110      011  1346999999988889999999999999999886 999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ||...+..+....+..... .|                     .                          ....+..+.+
T Consensus       211 p~~~~~~~~~~~~i~~~~~-~~---------------------~--------------------------~~~~~~~~~~  242 (269)
T cd05065         211 PYWDMSNQDVINAIEQDYR-LP---------------------P--------------------------PMDCPTALHQ  242 (269)
T ss_pred             CCCCCCHHHHHHHHHcCCc-CC---------------------C--------------------------cccCCHHHHH
Confidence            9976555443333321110 00                     0                          0124567899


Q ss_pred             HHhhccccCCCCCcCHHHHhc
Q 017021          348 LLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~  368 (379)
                      ++.+||+.||++||+++++++
T Consensus       243 li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         243 LMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             HHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=5e-37  Score=281.30  Aligned_cols=259  Identities=24%  Similarity=0.284  Sum_probs=187.9

Q ss_pred             hhhhhhhhccccccceeEEEEE----ecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           42 AFADKIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~----~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      +..|++.+.||+|+||+||++.    ...++..||+|.+....  .....+.+|++++..+     .|++++++.+++..
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~   77 (283)
T cd05080           3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL-----YHENIVKYKGCCSE   77 (283)
T ss_pred             hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEec
Confidence            3456899999999999998864    34568899999987432  2345667788888887     77999999998765


Q ss_pred             --cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          116 --RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       116 --~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                        ....+++|||+ +++|.+++...   .+++..+..++.|++.||.|||+.|++||||||+||+++             
T Consensus        78 ~~~~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~-------------  141 (283)
T cd05080          78 QGGKGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD-------------  141 (283)
T ss_pred             CCCceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc-------------
Confidence              34689999999 89999999764   489999999999999999999999999999999999994             


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~  266 (379)
                                    .+..++|+|||.+.......      ....++..|+|||.+.+..++.++||||||+++|+|++|.
T Consensus       142 --------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~  207 (283)
T cd05080         142 --------------NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHC  207 (283)
T ss_pred             --------------CCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCC
Confidence                          44556777777665432211      1123456799999998888999999999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .|+......- ...+....+......       .......+                 ..        .......+..+.
T Consensus       208 ~p~~~~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~-----------------~~--------~~~~~~~~~~~~  254 (283)
T cd05080         208 DSKQSPPKKF-EEMIGPKQGQMTVVR-------LIELLERG-----------------MR--------LPCPKNCPQEVY  254 (283)
T ss_pred             CCCCCCcchh-hhhhcccccccchhh-------hhhhhhcC-----------------CC--------CCCCCCCCHHHH
Confidence            9986533210 000000000000000       00000000                 00        001123567899


Q ss_pred             HHHhhccccCCCCCcCHHHHhc
Q 017021          347 HLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      +++.+||+.||++|||++++++
T Consensus       255 ~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         255 ILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             HHHHHHhccChhhCCCHHHHHH
Confidence            9999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=9.2e-37  Score=275.39  Aligned_cols=240  Identities=23%  Similarity=0.297  Sum_probs=186.4

Q ss_pred             hccccccceeEEEEEecC-CC--ceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEE
Q 017021           49 SKMGEGTFGQVLECWDRE-RK--EMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  123 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~-~~--~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~  123 (379)
                      ++||+|++|.||+|.+.. .+  ..||+|.+.....  ....+..|+..+.++     .|++++++++.+.. ...++++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~-~~~~~v~   74 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSL-----DHENLIRLYGVVLT-HPLMMVT   74 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhc-----CCCCccceeEEEcC-CeEEEEE
Confidence            468999999999998765 33  3699999975433  345667788888887     77999999999888 8899999


Q ss_pred             eCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          124 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       124 e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      ||+ +++|.+.+.......+++..+..++.|++.||.|||+.|++|+||+|+||+++.++                    
T Consensus        75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~--------------------  134 (257)
T cd05040          75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDD--------------------  134 (257)
T ss_pred             EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCC--------------------
Confidence            999 89999999775434689999999999999999999999999999999999995544                    


Q ss_pred             ccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchH
Q 017021          203 KRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  275 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~  275 (379)
                             .++|+|||.+.......      ....++..|+|||.+.+..++.++|||||||++|+|++ |+.||...+..
T Consensus       135 -------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~  207 (257)
T cd05040         135 -------KVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS  207 (257)
T ss_pred             -------EEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH
Confidence                   45555555544322211      12346678999999988889999999999999999998 99999766554


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.......+                     .                          ....+..+.+++.+||+.
T Consensus       208 ~~~~~~~~~~~~~~---------------------~--------------------------~~~~~~~~~~li~~~l~~  240 (257)
T cd05040         208 QILKKIDKEGERLE---------------------R--------------------------PEACPQDIYNVMLQCWAH  240 (257)
T ss_pred             HHHHHHHhcCCcCC---------------------C--------------------------CccCCHHHHHHHHHHCCC
Confidence            44333322110000                     0                          112456889999999999


Q ss_pred             CCCCCcCHHHHhc
Q 017021          356 DPTDRLTAREALR  368 (379)
Q Consensus       356 dP~~Rpta~e~l~  368 (379)
                      +|++|||++++++
T Consensus       241 ~p~~Rps~~~~~~  253 (257)
T cd05040         241 NPADRPTFAALRE  253 (257)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999984

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=1.1e-36  Score=283.28  Aligned_cols=250  Identities=20%  Similarity=0.308  Sum_probs=190.8

Q ss_pred             echhhhhhhhccccccceeEEEEEec-------CCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEec
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDR-------ERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIR  110 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~-------~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~  110 (379)
                      +....|.+.++||+|+||.||+|.+.       .....+|+|.++...  .....+..|+.++..+    .+|+++++++
T Consensus         9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l----~~h~~iv~~~   84 (314)
T cd05099           9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLI----GKHKNIINLL   84 (314)
T ss_pred             ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhc----cCCCCeeeEE
Confidence            44567889999999999999999763       234579999987432  2234556677777666    2478999999


Q ss_pred             ceeeecceEEEEEeCC-CCCHHHHHHhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCc
Q 017021          111 NWFDYRNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPEN  175 (379)
Q Consensus       111 ~~~~~~~~~~lv~e~~-~~sL~~~l~~~~--------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~N  175 (379)
                      +++...+..+++|||+ +++|.+++....              ...++...+..++.|++.||.|||+.|++||||||+|
T Consensus        85 ~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N  164 (314)
T cd05099          85 GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN  164 (314)
T ss_pred             EEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccccee
Confidence            9999999999999999 899999997632              1347888999999999999999999999999999999


Q ss_pred             EEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCcc
Q 017021          176 VLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPC  250 (379)
Q Consensus       176 ili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~s  250 (379)
                      |++.                           .++.++|+|||.++......     ....++..|+|||.+.+..++.++
T Consensus       165 ill~---------------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  217 (314)
T cd05099         165 VLVT---------------------------EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQS  217 (314)
T ss_pred             EEEc---------------------------CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccc
Confidence            9994                           44456777777665332211     111234579999999888899999


Q ss_pred             chHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchh
Q 017021          251 DIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR  329 (379)
Q Consensus       251 DvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (379)
                      |||||||++|+|++ |..||......+....+.....                      ..                   
T Consensus       218 DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~----------------------~~-------------------  256 (314)
T cd05099         218 DVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR----------------------MD-------------------  256 (314)
T ss_pred             hhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC----------------------CC-------------------
Confidence            99999999999998 8999976554444332221100                      00                   


Q ss_pred             hHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          330 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                             .....+.++.+++.+||+.||++|||+.|+++
T Consensus       257 -------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         257 -------KPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             -------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                   01134568899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=6.3e-38  Score=313.36  Aligned_cols=269  Identities=25%  Similarity=0.353  Sum_probs=197.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee------
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY------  115 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~------  115 (379)
                      .|+.++.||+||||.||+++++.+|+.||||++...  +.....+.+|+..++++     +||||++++..|.+      
T Consensus       480 DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArL-----nHpNVVRYysAWVEs~~~~~  554 (1351)
T KOG1035|consen  480 DFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARL-----NHPNVVRYYSAWVESTAELT  554 (1351)
T ss_pred             hhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhc-----CCcceeeeehhhhccCCccc
Confidence            456788999999999999999999999999999754  55567788899999999     88999998875421      


Q ss_pred             --------------------------------------------------------------------------------
Q 017021          116 --------------------------------------------------------------------------------  115 (379)
Q Consensus       116 --------------------------------------------------------------------------------  115 (379)
                                                                                                      
T Consensus       555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS  634 (1351)
T KOG1035|consen  555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS  634 (1351)
T ss_pred             cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence                                                                                            


Q ss_pred             -------------------------c--------ceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 017021          116 -------------------------R--------NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM  161 (379)
Q Consensus       116 -------------------------~--------~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~L  161 (379)
                                               +        ..+||-|||| ...+.++++.+.. .-.....+.++.+|+.||.|+
T Consensus       635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~-~~~~d~~wrLFreIlEGLaYI  713 (1351)
T KOG1035|consen  635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHF-NSQRDEAWRLFREILEGLAYI  713 (1351)
T ss_pred             ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhccc-chhhHHHHHHHHHHHHHHHHH
Confidence                                     0        1368999999 6677777776541 114778999999999999999


Q ss_pred             HHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccC-CCCCcccccCCccchhh
Q 017021          162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER-PDQNYIVSTRHYRAPEV  240 (379)
Q Consensus       162 H~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~-~~~~~~~gt~~y~aPE~  240 (379)
                      |++|||||||||.||+++.+..+||+|||++.-.-...       ........+.+.....+ ......+||.-|+|||+
T Consensus       714 H~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~-------~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEl  786 (1351)
T KOG1035|consen  714 HDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENL-------ESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPEL  786 (1351)
T ss_pred             HhCceeeccCCcceeEEcCCCCeeecccccchhhhhhh-------hhHhhccCccccccCCCCcccccccceeeeecHHH
Confidence            99999999999999999988888888888874311000       00111111111111111 12245689999999999


Q ss_pred             hhCCC---CCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHc-CCCChhHHHhhhhhhhhhhccCCCCCCCCCC
Q 017021          241 ILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  316 (379)
Q Consensus       241 ~~~~~---~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (379)
                      +.+..   |+.|+|+||||++++||+   .||..  .+|-...+.+.. |..|.+                         
T Consensus       787 l~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~T--sMERa~iL~~LR~g~iP~~-------------------------  836 (1351)
T KOG1035|consen  787 LSDTSSNKYNSKIDMYSLGIVLFEML---YPFGT--SMERASILTNLRKGSIPEP-------------------------  836 (1351)
T ss_pred             hcccccccccchhhhHHHHHHHHHHh---ccCCc--hHHHHHHHHhcccCCCCCC-------------------------
Confidence            97654   999999999999999999   45753  333333333322 222221                         


Q ss_pred             chhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCC
Q 017021          317 SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT  373 (379)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~  373 (379)
                                        ..++.+.-+.-..+|++||+.||++||||.|+|++.||.
T Consensus       837 ------------------~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  837 ------------------ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             ------------------cccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence                              011223345667899999999999999999999999997

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=7e-37  Score=282.25  Aligned_cols=256  Identities=22%  Similarity=0.332  Sum_probs=190.7

Q ss_pred             echhhhhhhhccccccceeEEEEEecC----------------CCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCC
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRE----------------RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK  101 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~----------------~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~  101 (379)
                      |....|++.++||+|+||.||++.+..                ++..||+|.+...  ......+..|+.++..+     
T Consensus         2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l-----   76 (296)
T cd05095           2 FPRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRL-----   76 (296)
T ss_pred             CChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-----
Confidence            345568999999999999999986432                3457999998743  22345677888888887     


Q ss_pred             CCCeeEEecceeeecceEEEEEeCC-CCCHHHHHHhCCC---------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCC
Q 017021          102 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNY---------RSFPIDLVREIARQLLECIAFMHDLCMIHTDL  171 (379)
Q Consensus       102 ~~~~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~---------~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dl  171 (379)
                      .|++++++++++...+..+++|||+ +++|.+++.....         ..+++..+..++.|++.||+|||+.|++||||
T Consensus        77 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl  156 (296)
T cd05095          77 KDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDL  156 (296)
T ss_pred             CCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccC
Confidence            6799999999999999999999999 8999999876431         13667889999999999999999999999999


Q ss_pred             CCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCC
Q 017021          172 KPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGW  246 (379)
Q Consensus       172 kp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~  246 (379)
                      ||+||+++                           .+..++|+|||.+.......     ....++..|+|||...+..+
T Consensus       157 kp~Nili~---------------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~  209 (296)
T cd05095         157 ATRNCLVG---------------------------KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKF  209 (296)
T ss_pred             ChheEEEc---------------------------CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCc
Confidence            99999994                           44556777777665322211     11234568999999888889


Q ss_pred             CCccchHhHHHHHHHHHh--CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhh
Q 017021          247 TYPCDIWSVGCILVELCT--GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSV  324 (379)
Q Consensus       247 ~~~sDvwSlG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (379)
                      +.++|+|||||++|+|++  |..||...+..+......+...               ........  +            
T Consensus       210 ~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~---------------~~~~~~~~--~------------  260 (296)
T cd05095         210 TTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFR---------------DQGRQVYL--P------------  260 (296)
T ss_pred             cchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHh---------------hccccccC--C------------
Confidence            999999999999999998  7788876544333221111000               00000000  0            


Q ss_pred             ccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          325 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                                  ....++..+.+++.+||+.||.+|||+.++++
T Consensus       261 ------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         261 ------------KPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             ------------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                        01134578899999999999999999999974

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1.2e-36  Score=275.04  Aligned_cols=237  Identities=24%  Similarity=0.345  Sum_probs=181.7

Q ss_pred             ccccccceeEEEEEec--CCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeC
Q 017021           50 KMGEGTFGQVLECWDR--ERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEK  125 (379)
Q Consensus        50 ~Lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~  125 (379)
                      .||+|+||.||+|.+.  .++..||+|++....  .....+.+|+.+++++     .|++++++++.++. ...++||||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~ii~~~~~~~~-~~~~lv~e~   75 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQL-----DNPYIVRMIGVCEA-EALMLVMEM   75 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhc-----CCCCeEEEEEEEcC-CCeEEEEEe
Confidence            4899999999999765  445679999987432  2234567888888887     77999999998764 578999999


Q ss_pred             C-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccccc
Q 017021          126 L-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR  204 (379)
Q Consensus       126 ~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (379)
                      + +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++.                        
T Consensus        76 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~------------------------  130 (257)
T cd05115          76 ASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVN------------------------  130 (257)
T ss_pred             CCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcC------------------------
Confidence            9 899999987543 36899999999999999999999999999999999999944                        


Q ss_pred             CCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHH
Q 017021          205 MPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  277 (379)
Q Consensus       205 ~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~  277 (379)
                         +..++|+|||.+.......      ....++..|+|||.+....++.++|||||||++|++++ |..||......+.
T Consensus       131 ---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~  207 (257)
T cd05115         131 ---QHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV  207 (257)
T ss_pred             ---CCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH
Confidence               4456666666654322211      11123567999999988889999999999999999996 9999986554433


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.+...                      ..                          .....+.++.++|.+||+.||
T Consensus       208 ~~~~~~~~~----------------------~~--------------------------~~~~~~~~l~~li~~c~~~~~  239 (257)
T cd05115         208 MSFIEQGKR----------------------LD--------------------------CPAECPPEMYALMKDCWIYKW  239 (257)
T ss_pred             HHHHHCCCC----------------------CC--------------------------CCCCCCHHHHHHHHHHcCCCh
Confidence            322211100                      00                          012356789999999999999


Q ss_pred             CCCcCHHHHhc
Q 017021          358 TDRLTAREALR  368 (379)
Q Consensus       358 ~~Rpta~e~l~  368 (379)
                      ++||++.++.+
T Consensus       240 ~~Rp~~~~i~~  250 (257)
T cd05115         240 EDRPNFAKVEE  250 (257)
T ss_pred             hhCcCHHHHHH
Confidence            99999999864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=8.4e-37  Score=282.82  Aligned_cols=252  Identities=19%  Similarity=0.292  Sum_probs=192.7

Q ss_pred             eechhhhhhhhccccccceeEEEEEec-------CCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEe
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDR-------ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQI  109 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~-------~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~  109 (379)
                      ......|.+.+.||+|+||.||+|.+.       .++..||+|.+...  ......+..|+.++..+    ..|+|++++
T Consensus        11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l----~~h~~i~~~   86 (304)
T cd05101          11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI----GKHKNIINL   86 (304)
T ss_pred             cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhh----ccCCCchhe
Confidence            356777889999999999999999752       23457999998643  22335566788877776    257899999


Q ss_pred             cceeeecceEEEEEeCC-CCCHHHHHHhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCC
Q 017021          110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPE  174 (379)
Q Consensus       110 ~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~--------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~  174 (379)
                      ++++......+++|||+ +++|.+++....              ...++...+..++.||+.||.|||+.|++||||||+
T Consensus        87 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~  166 (304)
T cd05101          87 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAAR  166 (304)
T ss_pred             eEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccc
Confidence            99999999999999999 889999997642              124678889999999999999999999999999999


Q ss_pred             cEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCc
Q 017021          175 NVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYP  249 (379)
Q Consensus       175 Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~  249 (379)
                      ||+++.                           ++.++|+|||.+.......     ....++..|+|||.+.+..++.+
T Consensus       167 Nili~~---------------------------~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  219 (304)
T cd05101         167 NVLVTE---------------------------NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ  219 (304)
T ss_pred             eEEEcC---------------------------CCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCch
Confidence            999944                           4456666666665332211     11234567999999988889999


Q ss_pred             cchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccch
Q 017021          250 CDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP  328 (379)
Q Consensus       250 sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (379)
                      +||||||+++|++++ |..||...+..+....+.....                      ..                  
T Consensus       220 ~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~----------------------~~------------------  259 (304)
T cd05101         220 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR----------------------MD------------------  259 (304)
T ss_pred             hhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc----------------------CC------------------
Confidence            999999999999998 8888876554443332211100                      00                  


Q ss_pred             hhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          329 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                              .....+.++.+++.+||+.+|++|||+.|+++.
T Consensus       260 --------~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         260 --------KPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             --------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence                    011356789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=9.3e-37  Score=280.24  Aligned_cols=247  Identities=21%  Similarity=0.307  Sum_probs=190.0

Q ss_pred             hhhhhhhhccccccceeEEEEEec-----CCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      ...|++.+.||+|+||.||+|.+.     .++..||+|++....  .....+..|+.++..+     .|++++++++++.
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l-----~h~~iv~~~~~~~   78 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-----DHPNIVKLLGVCA   78 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhc-----CCCchheEEEEEc
Confidence            456888899999999999999875     367889999987432  2345567788888887     7799999999999


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNN--------------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKP  173 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~--------------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp  173 (379)
                      .+...++++||+ +++|.+++....                    ...+++..+..++.|++.||+|||+.|++||||||
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p  158 (288)
T cd05050          79 VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLAT  158 (288)
T ss_pred             CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccH
Confidence            999999999999 889999997431                    12367888999999999999999999999999999


Q ss_pred             CcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCC
Q 017021          174 ENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTY  248 (379)
Q Consensus       174 ~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~  248 (379)
                      +||+++.                           ++.++|+|||.+.......     ....++..|+|||.+.+..++.
T Consensus       159 ~nil~~~---------------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  211 (288)
T cd05050         159 RNCLVGE---------------------------NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTT  211 (288)
T ss_pred             hheEecC---------------------------CCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCc
Confidence            9999944                           4456666666654322111     1123456799999998888999


Q ss_pred             ccchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccc
Q 017021          249 PCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL  327 (379)
Q Consensus       249 ~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (379)
                      ++|||||||++|+|++ |..||.+....+....+...  ..                    ...                
T Consensus       212 ~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~--~~--------------------~~~----------------  253 (288)
T cd05050         212 ESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDG--NV--------------------LSC----------------  253 (288)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC--CC--------------------CCC----------------
Confidence            9999999999999997 88888765544333222110  00                    000                


Q ss_pred             hhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          328 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                                ....+.++.++|.+||+.||++|||+.|+++
T Consensus       254 ----------~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         254 ----------PDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             ----------CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                      1124568999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=9.6e-37  Score=278.28  Aligned_cols=243  Identities=23%  Similarity=0.330  Sum_probs=182.3

Q ss_pred             ccccccceeEEEEEecCC------------------------CceEEEEEeeccch-hhHhHHHHHHHHHHHHhcCCCCC
Q 017021           50 KMGEGTFGQVLECWDRER------------------------KEMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGN  104 (379)
Q Consensus        50 ~Lg~G~~g~V~~~~~~~~------------------------~~~vAiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~  104 (379)
                      .||+|+||.||+|....+                        ...||+|++..... ....+.+|..+++.+     .|+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l-----~h~   76 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQV-----SHI   76 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcC-----CCC
Confidence            689999999999975322                        24589998864322 234455666666666     789


Q ss_pred             eeEEecceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccc
Q 017021          105 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEY  183 (379)
Q Consensus       105 ~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~  183 (379)
                      |++++++++..+...++||||+ +++|..++.... ..+++..+..++.||+.||+|||+.|++||||||+||+++..+.
T Consensus        77 niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~  155 (274)
T cd05076          77 HLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGL  155 (274)
T ss_pred             CeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCc
Confidence            9999999999999999999999 889988886543 35889999999999999999999999999999999999965431


Q ss_pred             cccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHH
Q 017021          184 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVEL  262 (379)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l  262 (379)
                      ..                    .....++++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++|++
T Consensus       156 ~~--------------------~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el  214 (274)
T cd05076         156 AE--------------------GTSPFIKLSDPGVSFTALSR-EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI  214 (274)
T ss_pred             cc--------------------CccceeeecCCccccccccc-cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHH
Confidence            10                    22345889999987543222 22357788999998865 5688999999999999998


Q ss_pred             H-hCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccc
Q 017021          263 C-TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  341 (379)
Q Consensus       263 ~-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (379)
                      + +|..||......+....... ....|                                                 ...
T Consensus       215 ~~~g~~p~~~~~~~~~~~~~~~-~~~~~-------------------------------------------------~~~  244 (274)
T cd05076         215 CFDGEVPLKERTPSEKERFYEK-KHRLP-------------------------------------------------EPS  244 (274)
T ss_pred             HhCCCCCccccChHHHHHHHHh-ccCCC-------------------------------------------------CCC
Confidence            5 69999976544332111111 00000                                                 113


Q ss_pred             hhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          342 AGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       342 ~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      ...+.++|.+||+.||++|||+.+++++
T Consensus       245 ~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         245 CKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             ChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            3578899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=1e-36  Score=286.04  Aligned_cols=253  Identities=19%  Similarity=0.272  Sum_probs=192.9

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCC-------CceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEE
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRER-------KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQ  108 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~-------~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~  108 (379)
                      ..+....|+|.+.||+|+||.||+|.+...       +..||+|.++..  ......+..|+.++.++    ..|+|+++
T Consensus         7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l----~~h~~iv~   82 (334)
T cd05100           7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMI----GKHKNIIN   82 (334)
T ss_pred             cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhh----cCCCCeee
Confidence            445667899999999999999999986432       246899988743  22345667788887776    24689999


Q ss_pred             ecceeeecceEEEEEeCC-CCCHHHHHHhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCC
Q 017021          109 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKP  173 (379)
Q Consensus       109 ~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~--------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp  173 (379)
                      +++.+..++..++++||+ +++|.+++....              ...++...+..++.|++.||+|||+.|++||||||
T Consensus        83 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp  162 (334)
T cd05100          83 LLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAA  162 (334)
T ss_pred             eeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence            999999999999999999 889999997632              12467888999999999999999999999999999


Q ss_pred             CcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCC
Q 017021          174 ENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTY  248 (379)
Q Consensus       174 ~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~  248 (379)
                      +||+++.                           +..++|+|||.++......     ....++..|+|||.+.+..++.
T Consensus       163 ~Nill~~---------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  215 (334)
T cd05100         163 RNVLVTE---------------------------DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTH  215 (334)
T ss_pred             ceEEEcC---------------------------CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCc
Confidence            9999944                           4456666766665332211     1112346799999999888999


Q ss_pred             ccchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccc
Q 017021          249 PCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL  327 (379)
Q Consensus       249 ~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (379)
                      ++|||||||++|+|++ |..||...+..+....+.....                      .+.                
T Consensus       216 ~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~----------------------~~~----------------  257 (334)
T cd05100         216 QSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHR----------------------MDK----------------  257 (334)
T ss_pred             hhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC----------------------CCC----------------
Confidence            9999999999999998 8899976554443332211100                      000                


Q ss_pred             hhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          328 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                                ....+..+.+++.+||+.+|++|||+.|++++
T Consensus       258 ----------~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         258 ----------PANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             ----------CCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence                      11345688999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.5e-36  Score=273.05  Aligned_cols=238  Identities=24%  Similarity=0.354  Sum_probs=187.8

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  126 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~  126 (379)
                      ++||+|++|.||++.+.. ++.||+|++.....  ....+..|+.++.++     .|++++.+++++......++||||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~   74 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQY-----DHPNIVKLIGVCVQKQPIYIVMELV   74 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCeEEEEEEEecCCCeEEEEEcC
Confidence            478999999999999877 89999999874332  345667788888877     7789999999999999999999999


Q ss_pred             -CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccC
Q 017021          127 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  205 (379)
Q Consensus       127 -~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (379)
                       +++|.+++.... ..++...+..++.+++.||.|||+.|++||||+|+||++                           
T Consensus        75 ~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili---------------------------  126 (251)
T cd05041          75 PGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV---------------------------  126 (251)
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEE---------------------------
Confidence             899999987643 257899999999999999999999999999999999999                           


Q ss_pred             CCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHHHH
Q 017021          206 PKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  279 (379)
Q Consensus       206 ~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~  279 (379)
                      +.++.++|+|||.+.......     ....++..|+|||.+.+..++.++|+|||||++|+|++ |..||..........
T Consensus       127 ~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~  206 (251)
T cd05041         127 GENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRE  206 (251)
T ss_pred             cCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHH
Confidence            445567777777765433111     11223557999999988889999999999999999998 889987655433322


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                      .+......                      .                          ..+..+..+.+++.+||+.||++
T Consensus       207 ~~~~~~~~----------------------~--------------------------~~~~~~~~~~~li~~~l~~~p~~  238 (251)
T cd05041         207 RIESGYRM----------------------P--------------------------APQLCPEEIYRLMLQCWAYDPEN  238 (251)
T ss_pred             HHhcCCCC----------------------C--------------------------CCccCCHHHHHHHHHHhccChhh
Confidence            22111000                      0                          01134568999999999999999


Q ss_pred             CcCHHHHhc
Q 017021          360 RLTAREALR  368 (379)
Q Consensus       360 Rpta~e~l~  368 (379)
                      |||+.|+++
T Consensus       239 Rp~~~ell~  247 (251)
T cd05041         239 RPSFSEIYN  247 (251)
T ss_pred             CcCHHHHHH
Confidence            999999985

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.4e-36  Score=275.31  Aligned_cols=244  Identities=20%  Similarity=0.254  Sum_probs=182.8

Q ss_pred             hccccccceeEEEEEecC------------CCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           49 SKMGEGTFGQVLECWDRE------------RKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~------------~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      +.||+|+||.||+|....            ....||+|.+.... .....+.+|+.++..+     .|+|++++++++..
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l-----~hp~iv~~~~~~~~   75 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQV-----SHKHIVLLYGVCVR   75 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhC-----CCCCEeeEEEEEec
Confidence            468999999999997532            23468999876432 2233455666777666     78999999999998


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      ....+++|||+ +++|..++.... ..+++..+..++.||+.||+|||+.|++||||||+||++..++..+         
T Consensus        76 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~---------  145 (262)
T cd05077          76 DVENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDG---------  145 (262)
T ss_pred             CCCCEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccC---------
Confidence            88999999999 888888876543 3589999999999999999999999999999999999996543210         


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhh-CCCCCCccchHhHHHHHHHHH-hCCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELC-TGEALFQTH  272 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlG~il~~l~-~g~~pf~~~  272 (379)
                                 .....++++|||.+...... ....++..|+|||.+. +..++.++|||||||++|+|+ +|..||...
T Consensus       146 -----------~~~~~~~l~d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~  213 (262)
T cd05077         146 -----------ECGPFIKLSDPGIPITVLSR-QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDK  213 (262)
T ss_pred             -----------CCCceeEeCCCCCCccccCc-ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCc
Confidence                       22344889999987644322 2345788899999886 456889999999999999997 588888654


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      ...+... ...  +.                     ..                          ...+.+.++.++|.+|
T Consensus       214 ~~~~~~~-~~~--~~---------------------~~--------------------------~~~~~~~~~~~li~~c  243 (262)
T cd05077         214 TLAEKER-FYE--GQ---------------------CM--------------------------LVTPSCKELADLMTHC  243 (262)
T ss_pred             chhHHHH-HHh--cC---------------------cc--------------------------CCCCChHHHHHHHHHH
Confidence            3322111 000  00                     00                          0012345789999999


Q ss_pred             cccCCCCCcCHHHHhcC
Q 017021          353 LRYDPTDRLTAREALRH  369 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~h  369 (379)
                      |+.||.+||++.+++++
T Consensus       244 l~~dp~~Rp~~~~il~~  260 (262)
T cd05077         244 MNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             cCCChhhCcCHHHHHHh
Confidence            99999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=1.2e-36  Score=276.83  Aligned_cols=248  Identities=23%  Similarity=0.291  Sum_probs=190.8

Q ss_pred             echhhhhhhhccccccceeEEEEEecCC---CceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRER---KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      .....|.+.++||+|+||.||+|.+..+   ...||+|.....  ......+..|+.++..+     .|++++++++++.
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~   77 (270)
T cd05056           3 IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF-----DHPHIVKLIGVIT   77 (270)
T ss_pred             echhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhC-----CCCchhceeEEEc
Confidence            3455688889999999999999987544   456999998743  23445677788888887     6789999999887


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      . ...++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+.|++||||||+||+++.             
T Consensus        78 ~-~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~-------------  142 (270)
T cd05056          78 E-NPVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSS-------------  142 (270)
T ss_pred             C-CCcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEec-------------
Confidence            5 4578999999 899999997654 35899999999999999999999999999999999999944             


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL  268 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~p  268 (379)
                                    .+.++|+|||.+.......    ....++..|+|||.+....++.++||||||+++|++++ |..|
T Consensus       143 --------------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p  208 (270)
T cd05056         143 --------------PDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKP  208 (270)
T ss_pred             --------------CCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCC
Confidence                          4456666776654332221    11123467999999988889999999999999999986 9999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |......+....+.+....                      ..                          ....+..+.++
T Consensus       209 f~~~~~~~~~~~~~~~~~~----------------------~~--------------------------~~~~~~~~~~l  240 (270)
T cd05056         209 FQGVKNNDVIGRIENGERL----------------------PM--------------------------PPNCPPTLYSL  240 (270)
T ss_pred             CCCCCHHHHHHHHHcCCcC----------------------CC--------------------------CCCCCHHHHHH
Confidence            9876554443322211100                      00                          11345789999


Q ss_pred             HhhccccCCCCCcCHHHHhcC
Q 017021          349 LQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~h  369 (379)
                      |.+||..+|++|||+.+++..
T Consensus       241 i~~~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         241 MTKCWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             HHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999998853

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-36  Score=276.52  Aligned_cols=241  Identities=22%  Similarity=0.293  Sum_probs=183.4

Q ss_pred             hccccccceeEEEEEecCCCc--eEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRERKE--MVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~--~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.||+|+||.||+|.++.++.  .+|+|.++..  ......+..|+.++..+.    +|++++++++.+...+..+++||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~~~~~~~~~~lv~e   76 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG----HHPNIINLLGACEHRGYLYLAIE   76 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhc----cCCCeeeEEEEEecCCCceEEEE
Confidence            368999999999999988775  4688888632  233456667888888773    56899999999999999999999


Q ss_pred             CC-CCCHHHHHHhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCC
Q 017021          125 KL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~--------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                      |+ +++|.+++....              ...+++..+..++.|++.||+|||+.|++||||||+||+++          
T Consensus        77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~----------  146 (270)
T cd05047          77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG----------  146 (270)
T ss_pred             eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEc----------
Confidence            99 899999987532              12478899999999999999999999999999999999994          


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CC
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GE  266 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~  266 (379)
                                       .+..++|+|||++.......  .....+..|+|||++....++.++|+|||||++|+|++ |.
T Consensus       147 -----------------~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~  209 (270)
T cd05047         147 -----------------ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG  209 (270)
T ss_pred             -----------------CCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCC
Confidence                             44556667777654221111  11123557999999988889999999999999999997 99


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||...+..+....+....                      ...                          .....+.++.
T Consensus       210 ~pf~~~~~~~~~~~~~~~~----------------------~~~--------------------------~~~~~~~~~~  241 (270)
T cd05047         210 TPYCGMTCAELYEKLPQGY----------------------RLE--------------------------KPLNCDDEVY  241 (270)
T ss_pred             CCccccCHHHHHHHHhCCC----------------------CCC--------------------------CCCcCCHHHH
Confidence            9997654433222211100                      000                          0012456789


Q ss_pred             HHHhhccccCCCCCcCHHHHhc
Q 017021          347 HLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      +++.+||+.||.+|||+.++++
T Consensus       242 ~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         242 DLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             HHHHHHcccChhhCCCHHHHHH
Confidence            9999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=1.5e-36  Score=276.90  Aligned_cols=250  Identities=19%  Similarity=0.297  Sum_probs=192.2

Q ss_pred             chhhhhhhhccccccceeEEEEEecC-----CCceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRE-----RKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      +...|++.+.||+|+||.||+|+.+.     +.+.||+|.+.....  ....+..|+.++.++     .|++++++++++
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~   77 (275)
T cd05046           3 PRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL-----SHKNVVRLLGLC   77 (275)
T ss_pred             ChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhc-----CCcceeeeEEEE
Confidence            34567888999999999999999754     356799999864332  245677889998888     678999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCC-------CCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccc
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYR-------SFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK  185 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~  185 (379)
                      ......++||||+ +++|.+++......       .+++..+..++.|++.||.|||+.|++||||||+||++..+    
T Consensus        78 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~----  153 (275)
T cd05046          78 REAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQ----  153 (275)
T ss_pred             CCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCC----
Confidence            9989999999999 89999999765411       58999999999999999999999999999999999999544    


Q ss_pred             cCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC----CCcccccCCccchhhhhCCCCCCccchHhHHHHHHH
Q 017021          186 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE  261 (379)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~  261 (379)
                                             +.++++|||.+......    .....++..|+|||.+.+..++.++||||||+++|+
T Consensus       154 -----------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~  210 (275)
T cd05046         154 -----------------------REVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWE  210 (275)
T ss_pred             -----------------------CcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHH
Confidence                                   44555666655422111    122345678999999988788899999999999999


Q ss_pred             HHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc
Q 017021          262 LCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  340 (379)
Q Consensus       262 l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (379)
                      +++ |..||...........+..                       +...++                        ....
T Consensus       211 l~~~~~~p~~~~~~~~~~~~~~~-----------------------~~~~~~------------------------~~~~  243 (275)
T cd05046         211 VFTQGELPFYGLSDEEVLNRLQA-----------------------GKLELP------------------------VPEG  243 (275)
T ss_pred             HHhCCCCCccccchHHHHHHHHc-----------------------CCcCCC------------------------CCCC
Confidence            998 8889865443332222111                       001110                        0123


Q ss_pred             chhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          341 SAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       341 ~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      .+..+.+++.+||+.||.+|||+.|++++
T Consensus       244 ~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         244 CPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             CCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            56789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=9e-37  Score=302.51  Aligned_cols=274  Identities=22%  Similarity=0.324  Sum_probs=176.8

Q ss_pred             chhhhhhhhccccccceeEEEEEecCC----CceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecce----
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRER----KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW----  112 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~----~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~----  112 (379)
                      ....|++.++||+|+||.||+|++..+    +..||+|++......      |......+.+.  .+.++..+...    
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~------e~~~~e~l~~~--~~~~~~~~~~~~~~~  201 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV------EIWMNERVRRA--CPNSCADFVYGFLEP  201 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh------HHHHHHHHHhh--chhhHHHHHHhhhcc
Confidence            445788999999999999999999988    999999998632211      11111122111  11111111111    


Q ss_pred             --eeecceEEEEEeCC-CCCHHHHHHhCCCC------------------CCCHHHHHHHHHHHHHHHHHHHHcCCcccCC
Q 017021          113 --FDYRNHICIVFEKL-GSSLYDFLRKNNYR------------------SFPIDLVREIARQLLECIAFMHDLCMIHTDL  171 (379)
Q Consensus       113 --~~~~~~~~lv~e~~-~~sL~~~l~~~~~~------------------~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dl  171 (379)
                        ...+...++|+||+ +++|.+++......                  ......+..++.||+.||.|||+.||+||||
T Consensus       202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL  281 (566)
T PLN03225        202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV  281 (566)
T ss_pred             cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence              23556799999999 88999998754311                  0123346689999999999999999999999


Q ss_pred             CCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC----CCcccccCCccchhhhhCCC--
Q 017021          172 KPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVSTRHYRAPEVILGLG--  245 (379)
Q Consensus       172 kp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~--  245 (379)
                      ||+|||++.                          ....++|+|||++......    .....+|+.|+|||.+....  
T Consensus       282 KP~NILl~~--------------------------~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~  335 (566)
T PLN03225        282 KPQNIIFSE--------------------------GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQT  335 (566)
T ss_pred             CHHHEEEeC--------------------------CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCC
Confidence            999999942                          2456888888888643221    23457899999999764321  


Q ss_pred             --------------------CCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhc
Q 017021          246 --------------------WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR  305 (379)
Q Consensus       246 --------------------~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (379)
                                          ++.++|||||||++|+|+++..++.  +....+.......+.....+.......      
T Consensus       336 ~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~------  407 (566)
T PLN03225        336 PSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSD--SNLIQFNRQLKRNDYDLVAWRKLVEPR------  407 (566)
T ss_pred             CCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCc--hHHHHHHHHHHhcCCcHHHHHHhhccc------
Confidence                                3345699999999999998665543  222222222222222222221111100      


Q ss_pred             cCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          306 RGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                                          ..+.... .....+.....+.+||.+||+.||.+|||++|+|+||||.+...
T Consensus       408 --------------------~~~~~~~-~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~  458 (566)
T PLN03225        408 --------------------ASPDLRR-GFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGL  458 (566)
T ss_pred             --------------------cchhhhh-hhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence                                0000000 00112234456789999999999999999999999999987653

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=1.1e-36  Score=276.79  Aligned_cols=245  Identities=21%  Similarity=0.330  Sum_probs=188.5

Q ss_pred             hccccccceeEEEEEecCCC------ceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           49 SKMGEGTFGQVLECWDRERK------EMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~------~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      +.||+|+||.||+|+++...      +.+|+|.+....  .....+.+|+.++..+     .|++++++++++...+..+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   75 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNF-----NHPNIVKLLGVCLLNEPQY   75 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhc-----CCCCeeeEeeeecCCCCeE
Confidence            36899999999999876544      789999886432  3345667788888877     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNN-----YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      ++|||+ +++|.+++....     ...+++..+..++.|++.||+|||+.+++|+||+|+||+++.++.           
T Consensus        76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~-----------  144 (269)
T cd05044          76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGY-----------  144 (269)
T ss_pred             EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCC-----------
Confidence            999999 899999997532     124788999999999999999999999999999999999965430           


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL  268 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~p  268 (379)
                                 +....++|+|||.+.......     ....++..|+|||.+.+..++.++|||||||++|+|++ |+.|
T Consensus       145 -----------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p  213 (269)
T cd05044         145 -----------DADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP  213 (269)
T ss_pred             -----------CCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCC
Confidence                       122367777887765332211     12234678999999988889999999999999999998 9999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |...+..+....+....                      ...                          .....+..+.++
T Consensus       214 ~~~~~~~~~~~~~~~~~----------------------~~~--------------------------~~~~~~~~~~~l  245 (269)
T cd05044         214 YPALNNQEVLQHVTAGG----------------------RLQ--------------------------KPENCPDKIYQL  245 (269)
T ss_pred             CcccCHHHHHHHHhcCC----------------------ccC--------------------------CcccchHHHHHH
Confidence            97665544333221100                      000                          012345688999


Q ss_pred             HhhccccCCCCCcCHHHHhc
Q 017021          349 LQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~  368 (379)
                      |.+||+.+|++||+++++++
T Consensus       246 i~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         246 MTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             HHHHcCCCcccCCCHHHHHH
Confidence            99999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.1e-37  Score=303.82  Aligned_cols=253  Identities=22%  Similarity=0.346  Sum_probs=209.7

Q ss_pred             eeeeeechhhhhhhhccccccceeEEEEEec-----CCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeE
Q 017021           35 ITYIVFSAFADKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCV  107 (379)
Q Consensus        35 ~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~  107 (379)
                      .....+...+.+..+.||+|+||.||+|+-.     .....||||.++..  .....++.+|++.+..+     +|+|||
T Consensus       478 ~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l-----~H~nIV  552 (774)
T KOG1026|consen  478 LKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAEL-----QHPNIV  552 (774)
T ss_pred             cceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhc-----cCCCeE
Confidence            3345566666777899999999999999753     33578999999843  33678899999999999     899999


Q ss_pred             EecceeeecceEEEEEeCC-CCCHHHHHHhCC--------CCC----CCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCC
Q 017021          108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNN--------YRS----FPIDLVREIARQLLECIAFMHDLCMIHTDLKPE  174 (379)
Q Consensus       108 ~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~--------~~~----l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~  174 (379)
                      ++++.+..++-.|+|+||| .|||.++|....        +..    ++..+.+.++.||+.|+.||-++.++||||-.+
T Consensus       553 rLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATR  632 (774)
T KOG1026|consen  553 RLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATR  632 (774)
T ss_pred             EEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhh
Confidence            9999999999999999999 999999997532        112    788999999999999999999999999999999


Q ss_pred             cEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcc-----cccCCccchhhhhCCCCCCc
Q 017021          175 NVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI-----VSTRHYRAPEVILGLGWTYP  249 (379)
Q Consensus       175 Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~-----~gt~~y~aPE~~~~~~~~~~  249 (379)
                      |+|+                           ..+..+||.|||+++......-+.     .-..+||+||.+...+|+.+
T Consensus       633 NCLV---------------------------ge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTte  685 (774)
T KOG1026|consen  633 NCLV---------------------------GENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTE  685 (774)
T ss_pred             hcee---------------------------ccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccch
Confidence            9999                           566778888888887544333222     22468999999999999999


Q ss_pred             cchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccch
Q 017021          250 CDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP  328 (379)
Q Consensus       250 sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (379)
                      |||||+||++||+++ |+.||.+....|..+.+.+--- +                                        
T Consensus       686 SDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l-L----------------------------------------  724 (774)
T KOG1026|consen  686 SDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL-L----------------------------------------  724 (774)
T ss_pred             hhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc-c----------------------------------------
Confidence            999999999999998 9999999988887766554211 1                                        


Q ss_pred             hhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHh
Q 017021          329 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL  367 (379)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l  367 (379)
                             ..++.++.++.+|+..||+.+|.+||+++|+-
T Consensus       725 -------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  725 -------SCPENCPTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             -------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence                   12245788999999999999999999999973

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-37  Score=302.54  Aligned_cols=263  Identities=23%  Similarity=0.381  Sum_probs=217.2

Q ss_pred             eeeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           35 ITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        35 ~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      +..++.+.-++.|.+.||.|.+|.||+++.+.+++..|+||+........++..|.+++..+    ++|+|++.+++++.
T Consensus        11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~----~~hpnv~~fyg~~~   86 (953)
T KOG0587|consen   11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKY----SHHPNVATFYGAFI   86 (953)
T ss_pred             hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhc----cCCCCcceEEEEEE
Confidence            44566777888999999999999999999999999999999987766677666677776665    68899999999886


Q ss_pred             e-----cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCC
Q 017021          115 Y-----RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD  188 (379)
Q Consensus       115 ~-----~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~  188 (379)
                      .     ++.+|+||||| |||..|+++...+..+.+..+..|++.++.||.+||...++|||+|-.|||+          
T Consensus        87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLL----------  156 (953)
T KOG0587|consen   87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLL----------  156 (953)
T ss_pred             EecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEE----------
Confidence            4     46899999999 9999999988656789999999999999999999999999999999999999          


Q ss_pred             CccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCC-----CCCCccchHhHHHHHH
Q 017021          189 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL-----GWTYPCDIWSVGCILV  260 (379)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwSlG~il~  260 (379)
                                       ..++.+||+|||.+......   .++..||+.|||||++...     .|+..+|+||||++..
T Consensus       157 -----------------T~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaI  219 (953)
T KOG0587|consen  157 -----------------TENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAI  219 (953)
T ss_pred             -----------------eccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceee
Confidence                             67778889999988654433   3567899999999998643     3778999999999999


Q ss_pred             HHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc
Q 017021          261 ELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  340 (379)
Q Consensus       261 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (379)
                      ||..|.+|+-...+.-.   +......+|..+                                           ..++.
T Consensus       220 EladG~PPl~DmHPmra---LF~IpRNPPPkL-------------------------------------------krp~k  253 (953)
T KOG0587|consen  220 EMAEGAPPLCDMHPMRA---LFLIPRNPPPKL-------------------------------------------KRPKK  253 (953)
T ss_pred             hhcCCCCCccCcchhhh---hccCCCCCCccc-------------------------------------------cchhh
Confidence            99999999964433221   222222222211                                           12346


Q ss_pred             chhHHHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       341 ~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      ++.++.+||..||..|-.+||+..++|.|||+++
T Consensus       254 Ws~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e  287 (953)
T KOG0587|consen  254 WSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE  287 (953)
T ss_pred             HHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence            8889999999999999999999999999999983

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=100.00  E-value=2.5e-37  Score=258.31  Aligned_cols=284  Identities=26%  Similarity=0.494  Sum_probs=213.5

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec--ce
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--NH  118 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~--~~  118 (379)
                      ..-.|+|.+++|+|.|+.||.|.+..++++++||+++.-  ....+.+|+.+++.+    .+++||+.+.+...++  ..
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV--kkkKIkREikIL~nL----~gg~NIi~L~DiV~Dp~Skt  109 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV--KKKKIKREIKILQNL----RGGPNIIKLLDIVKDPESKT  109 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH--HHHHHHHHHHHHHhc----cCCCCeeehhhhhcCccccC
Confidence            345789999999999999999999999999999999843  346778899999998    3679999999999875  46


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      ..+++||. ..+...+..     .++...++.++.+++.||.|+|+.||+|||+||.|+|++                  
T Consensus       110 paLiFE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId------------------  166 (338)
T KOG0668|consen  110 PSLIFEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID------------------  166 (338)
T ss_pred             chhHhhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec------------------
Confidence            78999999 555554432     488889999999999999999999999999999999996                  


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCC-CCCCc
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEAL-FQTHE  273 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~p-f~~~~  273 (379)
                              .....++|+|||+|-...+..  +..+.+..|-.||.+-. +.|+..-|+|||||++..|+-.+.| |.+.+
T Consensus       167 --------h~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~d  238 (338)
T KOG0668|consen  167 --------HELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD  238 (338)
T ss_pred             --------hhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCC
Confidence                    355679999999997666654  34567788899999865 5588999999999999999887666 56778


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc-chhHHHHHHhhc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH-SAGDLTHLLQGL  352 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~  352 (379)
                      ..++...+.+++|.-  +..    ..+.++.-.    .++   ..+.+-..-.......++..-+.+ .++++.||+.++
T Consensus       239 N~DQLVkIakVLGt~--el~----~Yl~KY~i~----Ldp---~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldkl  305 (338)
T KOG0668|consen  239 NYDQLVKIAKVLGTD--ELY----AYLNKYQID----LDP---QFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKL  305 (338)
T ss_pred             CHHHHHHHHHHhChH--HHH----HHHHHHccC----CCh---hHhhHhhccccccHHHhCCccccccCChHHHHHHHHH
Confidence            888888888888752  221    112111110    000   000000001111111222222222 348999999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      |..|-.+|+||.|++.||||..
T Consensus       306 LrYDHqeRlTakEam~HpyF~~  327 (338)
T KOG0668|consen  306 LRYDHQERLTAKEAMAHPYFAP  327 (338)
T ss_pred             HhhccccccchHHHhcCchHHH
Confidence            9999999999999999999964

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=1.5e-36  Score=277.72  Aligned_cols=249  Identities=18%  Similarity=0.239  Sum_probs=191.4

Q ss_pred             echhhhhhhhccccccceeEEEEEecC----CCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRE----RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~----~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      +....|++.+.||+|+||.||+|.+..    ++..||+|++...  ......+..|..++..+     .|+|++++++++
T Consensus         3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l-----~h~ni~~~~~~~   77 (280)
T cd05043           3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGL-----SHQNILPILHVC   77 (280)
T ss_pred             cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEE
Confidence            456678889999999999999999876    3688999998743  23345566788877777     789999999876


Q ss_pred             ee-cceEEEEEeCC-CCCHHHHHHhCCC------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccc
Q 017021          114 DY-RNHICIVFEKL-GSSLYDFLRKNNY------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK  185 (379)
Q Consensus       114 ~~-~~~~~lv~e~~-~~sL~~~l~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~  185 (379)
                      .. +...+++++|+ +++|.+++.....      ..+++..+..++.|++.||+|||+.+++||||||+||++..     
T Consensus        78 ~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~-----  152 (280)
T cd05043          78 IEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDE-----  152 (280)
T ss_pred             ecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcC-----
Confidence            55 57789999999 8999999876421      35889999999999999999999999999999999999944     


Q ss_pred             cCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHH
Q 017021          186 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILV  260 (379)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~  260 (379)
                                            +..++|+|||.++......     ....++..|+|||.+.+..++.++|||||||++|
T Consensus       153 ----------------------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~  210 (280)
T cd05043         153 ----------------------ELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLW  210 (280)
T ss_pred             ----------------------CCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHH
Confidence                                  4556666666654322211     1123566799999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhc
Q 017021          261 ELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD  339 (379)
Q Consensus       261 ~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (379)
                      ++++ |+.||...+..+....+..... +                     ..                          ..
T Consensus       211 el~~~g~~p~~~~~~~~~~~~~~~~~~-~---------------------~~--------------------------~~  242 (280)
T cd05043         211 ELMTLGQTPYVEIDPFEMAAYLKDGYR-L---------------------AQ--------------------------PI  242 (280)
T ss_pred             HHhcCCCCCcCcCCHHHHHHHHHcCCC-C---------------------CC--------------------------CC
Confidence            9998 9999987655443322211100 0                     00                          01


Q ss_pred             cchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          340 HSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       340 ~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      ..++++.+++.+||+.||++|||+.++++
T Consensus       243 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         243 NCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             cCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            24567899999999999999999999984

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3e-37  Score=289.08  Aligned_cols=191  Identities=27%  Similarity=0.383  Sum_probs=162.0

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchh-hHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc-eEEEEEeCC
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN-HICIVFEKL  126 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~-~~~lv~e~~  126 (379)
                      ..||+|+||.||+|....+ ..||||++...... ..++..|+.++.++     .|+|++++++++.+.+ ..++|+||+
T Consensus        81 ~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l-----~H~Nlv~LlGyC~e~~~~~~LVYEym  154 (361)
T KOG1187|consen   81 NLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRL-----RHPNLVKLLGYCLEGGEHRLLVYEYM  154 (361)
T ss_pred             cceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcC-----CCcCcccEEEEEecCCceEEEEEEcc
Confidence            6999999999999986554 88999998865444 56699999999999     7899999999999988 599999999


Q ss_pred             -CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC---CcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          127 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC---MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       127 -~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                       .|+|.+.+.......++|.....|+.+++.||+|||...   |+||||||+|||+                        
T Consensus       155 ~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL------------------------  210 (361)
T KOG1187|consen  155 PNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL------------------------  210 (361)
T ss_pred             CCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE------------------------
Confidence             889999998765326899999999999999999999744   9999999999999                        


Q ss_pred             ccCCCCCCeEEeecCcccccCC-CCCc--c-cccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          203 KRMPKSSAIKVIDFGSTTYERP-DQNY--I-VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~-~~~~--~-~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                         +.+...||+|||+|+.... ....  . .||.+|+|||+......+.++||||||+++.||++|+.+.+..
T Consensus       211 ---D~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~  281 (361)
T KOG1187|consen  211 ---DEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQS  281 (361)
T ss_pred             ---CCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCC
Confidence               5566677777777743332 2211  1 6899999999998888999999999999999999999888643

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=2.9e-36  Score=270.97  Aligned_cols=238  Identities=23%  Similarity=0.333  Sum_probs=184.6

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  126 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~  126 (379)
                      +.||+|+||.||+|... ++..+|+|.+....  .....+..|+.++..+     .|+|++++++++...+..++||||+
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~   74 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQY-----DHPNIVKLIGVCTQRQPIYIVMELV   74 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhC-----CCCCcCeEEEEEecCCccEEEEECC
Confidence            46899999999999864 57889999986432  2234566788888777     7899999999999999999999999


Q ss_pred             -CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccC
Q 017021          127 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  205 (379)
Q Consensus       127 -~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (379)
                       +++|.+++.... ..+++..+..++.|++.||.|+|+.|++||||+|+||+++.+                        
T Consensus        75 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~------------------------  129 (250)
T cd05085          75 PGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGEN------------------------  129 (250)
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCC------------------------
Confidence             899999987643 357899999999999999999999999999999999999544                        


Q ss_pred             CCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHHHHH
Q 017021          206 PKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAM  280 (379)
Q Consensus       206 ~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~  280 (379)
                         ..++|+|||.+.......    ....++..|+|||++.+..++.++|+||||+++|++++ |..||...........
T Consensus       130 ---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~  206 (250)
T cd05085         130 ---NVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQ  206 (250)
T ss_pred             ---CeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence               445666666554322111    11233567999999988888999999999999999998 9999976554433322


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      +......                      .                          .....+..+.+++.+||+.||++|
T Consensus       207 ~~~~~~~----------------------~--------------------------~~~~~~~~~~~li~~~l~~~p~~R  238 (250)
T cd05085         207 VEKGYRM----------------------S--------------------------CPQKCPDDVYKVMQRCWDYKPENR  238 (250)
T ss_pred             HHcCCCC----------------------C--------------------------CCCCCCHHHHHHHHHHcccCcccC
Confidence            2211000                      0                          011345789999999999999999


Q ss_pred             cCHHHHhc
Q 017021          361 LTAREALR  368 (379)
Q Consensus       361 pta~e~l~  368 (379)
                      ||+.|+++
T Consensus       239 p~~~~l~~  246 (250)
T cd05085         239 PKFSELQK  246 (250)
T ss_pred             CCHHHHHH
Confidence            99999975

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=3.1e-36  Score=273.84  Aligned_cols=248  Identities=20%  Similarity=0.367  Sum_probs=190.7

Q ss_pred             hhhhhhccccccceeEEEEEecC-CCceEEEEEeeccc-----------hhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRE-RKEMVAIKIVRGIK-----------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~-~~~~vAiK~~~~~~-----------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      .|++.+.||+|+||.||++.++. +++.+|+|.+....           ........|+.++...    ..|+|++.+++
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~----~~h~~i~~~~~   76 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQ----LRHPNIVRYYK   76 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhc----CCCCCeeeEEe
Confidence            37889999999999999999887 68899999985221           1112233454444332    26799999999


Q ss_pred             eeeecceEEEEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecccccccC
Q 017021          112 WFDYRNHICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVP  187 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~~~~~~~~  187 (379)
                      .+..++..+++|||+ +++|.+++...  ....+++..++.++.|++.||.|||+ .|++|+||+|+||++         
T Consensus        77 ~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~---------  147 (269)
T cd08528          77 TFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML---------  147 (269)
T ss_pred             eEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE---------
Confidence            999999999999999 88999988542  22358899999999999999999996 789999999999999         


Q ss_pred             CCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhC
Q 017021          188 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG  265 (379)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g  265 (379)
                                        ..++.++|+|||.+.......  ....|+..|+|||.+.+..++.++|+||||+++|+|++|
T Consensus       148 ------------------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g  209 (269)
T cd08528         148 ------------------GEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTL  209 (269)
T ss_pred             ------------------CCCCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhC
Confidence                              455567778888776543332  234578899999999888899999999999999999999


Q ss_pred             CCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          266 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       266 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                      +.||...+.......+......+.                                               .....+..+
T Consensus       210 ~~p~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~l  242 (269)
T cd08528         210 QPPFYSTNMLSLATKIVEAVYEPL-----------------------------------------------PEGMYSEDV  242 (269)
T ss_pred             CCcccccCHHHHHHHHhhccCCcC-----------------------------------------------CcccCCHHH
Confidence            999976554333322222111100                                               001345789


Q ss_pred             HHHHhhccccCCCCCcCHHHHhcC
Q 017021          346 THLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      .++|++||+.||++||++.|+.++
T Consensus       243 ~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         243 TDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             HHHHHHHCCCCCccCCCHHHHHHH
Confidence            999999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3e-36  Score=275.61  Aligned_cols=247  Identities=21%  Similarity=0.273  Sum_probs=192.0

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCc----eEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKE----MVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~----~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      +....|++.+.||+|+||.||+|.++.+|+    .+|+|......  .....+.+|+..++.+     .|+|++++++++
T Consensus         4 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~   78 (279)
T cd05057           4 LKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASV-----DHPHVVRLLGIC   78 (279)
T ss_pred             cCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEE
Confidence            445678899999999999999999876664    58999886443  2335566788888887     779999999988


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      .. ...++++||+ +++|.+++.... ..+++..+..++.|++.||+|||+.|++||||||+||+++             
T Consensus        79 ~~-~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~-------------  143 (279)
T cd05057          79 LS-SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVK-------------  143 (279)
T ss_pred             ec-CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEc-------------
Confidence            77 7899999999 899999997754 2489999999999999999999999999999999999994             


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCCCc-----ccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY-----IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GE  266 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~  266 (379)
                                    .++.++|+|||.+.........     ..++..|+|||.+....++.++|+|||||++|++++ |+
T Consensus       144 --------------~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~  209 (279)
T cd05057         144 --------------TPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGA  209 (279)
T ss_pred             --------------CCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCC
Confidence                          4445667777766543322211     123567999999988889999999999999999998 99


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||.+....+....+.... ..+                     .                          ....+..+.
T Consensus       210 ~p~~~~~~~~~~~~~~~~~-~~~---------------------~--------------------------~~~~~~~~~  241 (279)
T cd05057         210 KPYEGIPAVEIPDLLEKGE-RLP---------------------Q--------------------------PPICTIDVY  241 (279)
T ss_pred             CCCCCCCHHHHHHHHhCCC-CCC---------------------C--------------------------CCCCCHHHH
Confidence            9998766544333222211 000                     0                          012456788


Q ss_pred             HHHhhccccCCCCCcCHHHHhc
Q 017021          347 HLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      +++.+||..||..|||+.++++
T Consensus       242 ~~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         242 MVLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             HHHHHHcCCChhhCCCHHHHHH
Confidence            9999999999999999998873

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.5e-36  Score=274.09  Aligned_cols=242  Identities=23%  Similarity=0.313  Sum_probs=185.4

Q ss_pred             hccccccceeEEEEEecCCC----------ceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           49 SKMGEGTFGQVLECWDRERK----------EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~----------~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      +.||+|+||.||+|.++.++          ..+++|++.........+.+|+.++..+     .|++++.+++++.. ..
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~-~~   74 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQL-----SHKHLVKLYGVCVR-DE   74 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcC-----CCcchhheeeEEec-CC
Confidence            46899999999999998776          4588898775444356667788887777     77999999998877 77


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .++||||+ +++|.+++..... .++...+..++.||+.||+|||+.|++||||||+||+++.++..             
T Consensus        75 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~-------------  140 (259)
T cd05037          75 NIMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLN-------------  140 (259)
T ss_pred             cEEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccc-------------
Confidence            89999999 8999999987542 58899999999999999999999999999999999999654310             


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCC--CCCCccchHhHHHHHHHHHh-CCCCCCCCch
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCT-GEALFQTHEN  274 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~  274 (379)
                             ......++|+|||.+..... .....++..|+|||++.+.  .++.++|+|||||++|+|++ |..||...+.
T Consensus       141 -------~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~  212 (259)
T cd05037         141 -------EGYVPFIKLSDPGIPITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS  212 (259)
T ss_pred             -------cCCceeEEeCCCCccccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc
Confidence                   01223689999998875443 2234567789999998876  68899999999999999999 5777765432


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .+......                      .....+                            ......+.++|.+||.
T Consensus       213 ~~~~~~~~----------------------~~~~~~----------------------------~~~~~~~~~li~~~l~  242 (259)
T cd05037         213 SEKERFYQ----------------------DQHRLP----------------------------MPDCAELANLINQCWT  242 (259)
T ss_pred             hhHHHHHh----------------------cCCCCC----------------------------CCCchHHHHHHHHHhc
Confidence            21111000                      000000                            0122578899999999


Q ss_pred             cCCCCCcCHHHHhc
Q 017021          355 YDPTDRLTAREALR  368 (379)
Q Consensus       355 ~dP~~Rpta~e~l~  368 (379)
                      .||++|||+.++++
T Consensus       243 ~~p~~Rpt~~~il~  256 (259)
T cd05037         243 YDPTKRPSFRAILR  256 (259)
T ss_pred             cChhhCCCHHHHHH
Confidence            99999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=3e-36  Score=276.19  Aligned_cols=261  Identities=23%  Similarity=0.313  Sum_probs=186.1

Q ss_pred             chhhhhhhhccccccceeEEEEE----ecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~----~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      ....|++.+.||+|+||.||++.    +..+++.||+|.+.... .....+..|++++.++     .|+|++++.+++..
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~   76 (284)
T cd05081           2 EERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSL-----QHDNIVKYKGVCYS   76 (284)
T ss_pred             ccccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-----CCCCeeEEEEEEcc
Confidence            34578899999999999999997    44678899999986433 2334567788888887     78999999887643


Q ss_pred             --cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          116 --RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       116 --~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                        ....++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++.+           
T Consensus        77 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~-----------  144 (284)
T cd05081          77 AGRRNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESE-----------  144 (284)
T ss_pred             CCCCceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCC-----------
Confidence              35789999999 899999997643 258999999999999999999999999999999999999544           


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCCC------cccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN------YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~  266 (379)
                                      +.++|+|||.+........      ...++..|+|||.+.+..++.++|+|||||++|+|++|.
T Consensus       145 ----------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~  208 (284)
T cd05081         145 ----------------NRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYS  208 (284)
T ss_pred             ----------------CeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcC
Confidence                            4455566655543221111      112334589999998888999999999999999999987


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCC--hhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLP--QHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      .|+..... ...    +..+...  ......    .......+. ..                        ......+..
T Consensus       209 ~~~~~~~~-~~~----~~~~~~~~~~~~~~~----~~~~~~~~~-~~------------------------~~~~~~~~~  254 (284)
T cd05081         209 DKSCSPPA-EFM----RMMGNDKQGQMIVYH----LIELLKNNG-RL------------------------PAPPGCPAE  254 (284)
T ss_pred             CcCCCcch-hhh----hhcccccccccchHH----HHHHHhcCC-cC------------------------CCCCCCCHH
Confidence            76643221 111    1111100  000000    000000000 00                        011235678


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhc
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      +.+++.+||+.||++|||+.|+++
T Consensus       255 ~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         255 IYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             HHHHHHHHccCChhhCCCHHHHHH
Confidence            999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-38  Score=319.92  Aligned_cols=250  Identities=30%  Similarity=0.436  Sum_probs=199.2

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ++++-...||.|.||.||.|.+..||+..|+|.++-.   .+.-..+.+|..++..+     .|||++++++.-.+...+
T Consensus      1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~l-----nHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGL-----NHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred             eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhc-----cCccccccCceeecHHHH
Confidence            3445557899999999999999999999999998632   22334455688888888     889999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      +|.|||| +|+|.+++...+  ..++.....+..|++.|++|||++|||||||||+||+++.+|                
T Consensus      1310 ~IFMEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g---------------- 1371 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNG---------------- 1371 (1509)
T ss_pred             HHHHHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCC----------------
Confidence            9999999 999999998754  678888899999999999999999999999999999995554                


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC-------CcccccCCccchhhhhCC---CCCCccchHhHHHHHHHHHhCCCC
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                                 .+|+.|||.|....+..       ....||+.|||||++.+.   +-..++|||||||+..||+||+.|
T Consensus      1372 -----------~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrP 1440 (1509)
T KOG4645|consen 1372 -----------LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRP 1440 (1509)
T ss_pred             -----------cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCc
Confidence                       45555555554322221       245799999999999764   356889999999999999999999


Q ss_pred             CCCC-chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          269 FQTH-ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       269 f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      |... ++.....++..  |.-|                    .+|                          +..+++.+|
T Consensus      1441 W~~~dne~aIMy~V~~--gh~P--------------------q~P--------------------------~~ls~~g~d 1472 (1509)
T KOG4645|consen 1441 WAELDNEWAIMYHVAA--GHKP--------------------QIP--------------------------ERLSSEGRD 1472 (1509)
T ss_pred             hhhccchhHHHhHHhc--cCCC--------------------CCc--------------------------hhhhHhHHH
Confidence            9753 33333333322  2211                    111                          236789999


Q ss_pred             HHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          348 LLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      ||.+||+.||.+|++|.|+++|.|-+.
T Consensus      1473 Fle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1473 FLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred             HHHHHHhcCchhhhHHHHHHHhhcccc
Confidence            999999999999999999999999764

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-37  Score=290.05  Aligned_cols=248  Identities=24%  Similarity=0.350  Sum_probs=198.7

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCc---e-EEEEEeec----cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKE---M-VAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~---~-vAiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      .-.+..+.++||+|+||.||+|+.+..+.   . ||+|..+.    ......++++|.+++.++     +|+||++++++
T Consensus       155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-----~H~NVVr~yGV  229 (474)
T KOG0194|consen  155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL-----NHPNVVRFYGV  229 (474)
T ss_pred             eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC-----CCCCEEEEEEE
Confidence            33344566899999999999998876432   3 89999884    245567888899999998     88999999999


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                      .....-+++|||+| ||+|.++|.+... .++..+...++.+.+.||+|||+.+++||||-.+|+|+..           
T Consensus       230 a~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~-----------  297 (474)
T KOG0194|consen  230 AVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSK-----------  297 (474)
T ss_pred             EcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecC-----------
Confidence            99999999999999 9999999998763 5999999999999999999999999999999999999944           


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCC--C-cccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCC
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--N-YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEA  267 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~-~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~  267 (379)
                                      +..+||+|||++.......  . ...-...|+|||.+....|+.++||||+||++||+++ |..
T Consensus       298 ----------------~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~  361 (474)
T KOG0194|consen  298 ----------------KGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAE  361 (474)
T ss_pred             ----------------CCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCC
Confidence                            4446666666655332110  0 1123468999999998899999999999999999998 888


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ||.+....+....+.......+.                                               ....+..+..
T Consensus       362 Py~g~~~~~v~~kI~~~~~r~~~-----------------------------------------------~~~~p~~~~~  394 (474)
T KOG0194|consen  362 PYPGMKNYEVKAKIVKNGYRMPI-----------------------------------------------PSKTPKELAK  394 (474)
T ss_pred             CCCCCCHHHHHHHHHhcCccCCC-----------------------------------------------CCCCHHHHHH
Confidence            99998887777666332211110                                               1134567888


Q ss_pred             HHhhccccCCCCCcCHHHHhc
Q 017021          348 LLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~  368 (379)
                      ++.+|+..||++|||+.++.+
T Consensus       395 ~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  395 VMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             HHHHhccCChhhccCHHHHHH
Confidence            999999999999999998863

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=3.9e-36  Score=277.08  Aligned_cols=257  Identities=15%  Similarity=0.215  Sum_probs=180.4

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCC---CceEEEEEeeccchhh-Hh--H------HHHHHHHHHHHhcCCCCCee
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRER---KEMVAIKIVRGIKKYR-EA--A------MIEIEVLQQLAKHDKGGNRC  106 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~~~-~~--~------~~e~~~l~~l~~~~~~~~~i  106 (379)
                      ......|+|.+.||+|+||.||+|.+..+   +..+|+|+........ ..  .      ..++..+..+  ....|+++
T Consensus         8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~--~~~~h~~i   85 (294)
T PHA02882          8 DITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNI--HNIDHLGI   85 (294)
T ss_pred             ccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHh--ccCCCCCC
Confidence            34556799999999999999999998877   6778888754221110 00  0      0111111111  22367788


Q ss_pred             EEecceeeecc----eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccc
Q 017021          107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE  182 (379)
Q Consensus       107 ~~~~~~~~~~~----~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~  182 (379)
                      +.+++......    ..+++++++..++.+.+....  ..++..+..++.|++.||+|||+.+++||||||+||+++   
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~---  160 (294)
T PHA02882         86 PKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD---  160 (294)
T ss_pred             CcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---
Confidence            88887655432    457889988778888876643  467888999999999999999999999999999999994   


Q ss_pred             ccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCC----------CCCcccccCCccchhhhhCCCCCCccch
Q 017021          183 YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP----------DQNYIVSTRHYRAPEVILGLGWTYPCDI  252 (379)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~sDv  252 (379)
                                              .+..++|+|||++.....          ......||+.|+|||+..+..++.++||
T Consensus       161 ------------------------~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~Di  216 (294)
T PHA02882        161 ------------------------GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDL  216 (294)
T ss_pred             ------------------------CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHH
Confidence                                    445677777777654321          1122468999999999999999999999


Q ss_pred             HhHHHHHHHHHhCCCCCCCCchHH-HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhH
Q 017021          253 WSVGCILVELCTGEALFQTHENLE-HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ  331 (379)
Q Consensus       253 wSlG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (379)
                      |||||++|+|++|..||....... .......       +..+.        +..+...                     
T Consensus       217 wSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~-------~~~~~--------~~~~~~~---------------------  260 (294)
T PHA02882        217 ESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKC-------DFIKR--------LHEGKIK---------------------  260 (294)
T ss_pred             HHHHHHHHHHHhCCCCCCccccchHHHHHhHH-------HHHHH--------hhhhhhc---------------------
Confidence            999999999999999998763222 1111110       00000        0000000                     


Q ss_pred             HHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          332 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       332 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                            ....+..+.++++.|++.+|++||+.+++++
T Consensus       261 ------~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        261 ------IKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             ------cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                  1124577999999999999999999999874

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=5.3e-36  Score=272.41  Aligned_cols=244  Identities=23%  Similarity=0.286  Sum_probs=178.4

Q ss_pred             hccccccceeEEEEEec--CCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDR--ERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      ++||+|+||.||+|...  .....+|+|.+....  .....+.+|+..+..+     .|+|++++++.+......++|||
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-----~h~nii~~~~~~~~~~~~~lv~e   75 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYREL-----NHPNVLQCLGQCIESIPYLLVLE   75 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhC-----CCCCcceEEEEECCCCceEEEEE
Confidence            36899999999999643  345678999876332  2234556788777766     78999999999999999999999


Q ss_pred             CC-CCCHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          125 KL-GSSLYDFLRKNNY---RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      |+ +++|.+++.....   ...++..+..++.||+.||+|||+.|++||||||+||+++                     
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---------------------  134 (269)
T cd05042          76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLT---------------------  134 (269)
T ss_pred             eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEec---------------------
Confidence            99 8999999976431   2346778899999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhC-------CCCCCccchHhHHHHHHHHHh-CCC
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILG-------LGWTYPCDIWSVGCILVELCT-GEA  267 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlG~il~~l~~-g~~  267 (379)
                            .++.++|+|||.+.......     ....++..|+|||+...       ..++.++|||||||++|+|++ |..
T Consensus       135 ------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~  208 (269)
T cd05042         135 ------ADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQ  208 (269)
T ss_pred             ------CCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCC
Confidence                  45566777777664322211     12245677999999743       346789999999999999998 788


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ||......+..........                      .+.+.              +       ......+..+.+
T Consensus       209 p~~~~~~~~~~~~~~~~~~----------------------~~~~~--------------~-------~~~~~~~~~~~~  245 (269)
T cd05042         209 PYPDLSDEQVLKQVVREQD----------------------IKLPK--------------P-------QLDLKYSDRWYE  245 (269)
T ss_pred             CCCcCCHHHHHHHHhhccC----------------------ccCCC--------------C-------cccccCCHHHHH
Confidence            8876554443322211110                      00000              0       011235567788


Q ss_pred             HHhhccccCCCCCcCHHHHhc
Q 017021          348 LLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~  368 (379)
                      ++..|+ .||++|||++||++
T Consensus       246 ~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         246 VMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHHHHh-cCcccccCHHHHHH
Confidence            999998 59999999999985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.1e-37  Score=291.00  Aligned_cols=278  Identities=25%  Similarity=0.394  Sum_probs=211.1

Q ss_pred             hhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           47 IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        47 i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      .++.||-|+||.|.+++...|..+||+|.+.+.+    .+......|.++|+..     +.+.||+++..|.+.+.+|+|
T Consensus       633 kik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-----Dn~WVVrLyySFQDkdnLYFV  707 (1034)
T KOG0608|consen  633 KIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-----DNEWVVRLYYSFQDKDNLYFV  707 (1034)
T ss_pred             EEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-----CCcceEEEEEEeccCCceEEE
Confidence            3478999999999999988999999999997533    2334445688888776     778999999999999999999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC--CCCCC
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH--TPKDS  199 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~--~~~~~  199 (379)
                      |||+ ||++-.+|-+.+  .+++..++.++.++..|+++.|+.|+|||||||+||||+.+|.+|+.||||...  |--++
T Consensus       708 MdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHds  785 (1034)
T KOG0608|consen  708 MDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS  785 (1034)
T ss_pred             EeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecccc
Confidence            9999 999999998877  799999999999999999999999999999999999999999999999999742  22222


Q ss_pred             cccc---------------cCCCCCCeEEeecCcccccCCC-CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHH
Q 017021          200 SYFK---------------RMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC  263 (379)
Q Consensus       200 ~~~~---------------~~~~~~~~~l~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~  263 (379)
                      +++.               +.+....+++..+......... ..+.+||+.|+|||++....|+.-+|+||.|||||+|+
T Consensus       786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~  865 (1034)
T KOG0608|consen  786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML  865 (1034)
T ss_pred             ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh
Confidence            2221               1111111222221111100000 12358999999999999999999999999999999999


Q ss_pred             hCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchh
Q 017021          264 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  343 (379)
Q Consensus       264 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (379)
                      .|..||......++...+......                                     +..+..        ...+.
T Consensus       866 ~g~~pf~~~tp~~tq~kv~nw~~~-------------------------------------l~~~~~--------~~ls~  900 (1034)
T KOG0608|consen  866 VGQPPFLADTPGETQYKVINWRNF-------------------------------------LHIPYQ--------GNLSK  900 (1034)
T ss_pred             hCCCCccCCCCCcceeeeeehhhc-------------------------------------cccccc--------cccCH
Confidence            999999877766655444332111                                     011111        23577


Q ss_pred             HHHHHHhhccccCCCCCc---CHHHHhcCCCCCCCCc
Q 017021          344 DLTHLLQGLLRYDPTDRL---TAREALRHPFFTRDHL  377 (379)
Q Consensus       344 ~~~~li~~~L~~dP~~Rp---ta~e~l~hp~f~~~~~  377 (379)
                      ++.++|.+ |.-+++.|.   .++||..||||+...+
T Consensus       901 e~~~li~k-Lc~sad~RLGkng~d~vKaHpfFkgIDf  936 (1034)
T KOG0608|consen  901 EALDLIQK-LCCSADSRLGKNGADQVKAHPFFKGIDF  936 (1034)
T ss_pred             HHHHHHHH-HhcChhhhhcccchhhhhcCccccccch
Confidence            88899887 556788888   5888999999998764

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=9.4e-36  Score=270.85  Aligned_cols=244  Identities=20%  Similarity=0.243  Sum_probs=178.3

Q ss_pred             hccccccceeEEEEEec--CCCceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDR--ERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.||+|+||.||+|.+.  .++..+|+|.++....  ....+.+|+..+.++     .|+|++++++.+.+....++|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e   75 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSL-----QHSNLLQCLGQCTEVTPYLLVME   75 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEcCCCCcEEEEE
Confidence            36899999999999754  4567899999874332  234566788888887     78999999999999899999999


Q ss_pred             CC-CCCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          125 KL-GSSLYDFLRKNN---YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      |+ +++|.+++....   ....+...+..++.|++.||.|||+.|++|+||||+||+++.                    
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~--------------------  135 (269)
T cd05087          76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTA--------------------  135 (269)
T ss_pred             CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC--------------------
Confidence            99 899999997532   123566788889999999999999999999999999999954                    


Q ss_pred             ccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhhCC-------CCCCccchHhHHHHHHHHHh-CCC
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGL-------GWTYPCDIWSVGCILVELCT-GEA  267 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~-------~~~~~sDvwSlG~il~~l~~-g~~  267 (379)
                             +..++|+|||.+......     .....++..|+|||++.+.       .++.++|+|||||++|+|++ |..
T Consensus       136 -------~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~  208 (269)
T cd05087         136 -------DLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQ  208 (269)
T ss_pred             -------CCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCC
Confidence                   445666666665432211     1123467789999998642       35789999999999999996 999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ||......+.........                      ....+.              +       ......+..+.+
T Consensus       209 p~~~~~~~~~~~~~~~~~----------------------~~~~~~--------------~-------~~~~~~~~~~~~  245 (269)
T cd05087         209 PYRHLSDEQVLTYTVREQ----------------------QLKLPK--------------P-------RLKLPLSDRWYE  245 (269)
T ss_pred             CCCCCChHHHHHHHhhcc----------------------cCCCCC--------------C-------ccCCCCChHHHH
Confidence            997655433221111100                      000000              0       001124567888


Q ss_pred             HHhhccccCCCCCcCHHHHhc
Q 017021          348 LLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~  368 (379)
                      +++.|+ .+|++|||++|++.
T Consensus       246 l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         246 VMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             HHHHHh-cCcccCCCHHHHHH
Confidence            999998 68999999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=7.3e-36  Score=270.29  Aligned_cols=239  Identities=19%  Similarity=0.229  Sum_probs=176.5

Q ss_pred             hccccccceeEEEEEecC---CCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee-ecceEEEE
Q 017021           49 SKMGEGTFGQVLECWDRE---RKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD-YRNHICIV  122 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~---~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~-~~~~~~lv  122 (379)
                      +.||+|+||.||+|.+..   .+..||+|.+....  .....+..|..++..+     .|++++.+++++. .++..+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~~lv   75 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDF-----SHPNVLSLLGICLPSEGSPLVV   75 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccC-----CCCCcceEEEEeecCCCCcEEE
Confidence            468999999999998653   34679999985322  2334566677777766     7899999998654 56678999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      +||+ +++|.+++.... ..++...+..++.|++.||+|||+.+++||||||+||+++.+                    
T Consensus        76 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~--------------------  134 (262)
T cd05058          76 LPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDES--------------------  134 (262)
T ss_pred             EecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCC--------------------
Confidence            9999 899999997654 246777888999999999999999999999999999999544                    


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC-------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCc
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  273 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~  273 (379)
                             +.++|+|||.+.......       ....++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+
T Consensus       135 -------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~  207 (262)
T cd05058         135 -------FTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD  207 (262)
T ss_pred             -------CcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence                   445666666554321110       12235668999999988889999999999999999999 566676544


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+...  ..                    ...                          ....+..+.+++.+||
T Consensus       208 ~~~~~~~~~~~--~~--------------------~~~--------------------------~~~~~~~~~~li~~cl  239 (262)
T cd05058         208 SFDITVYLLQG--RR--------------------LLQ--------------------------PEYCPDPLYEVMLSCW  239 (262)
T ss_pred             HHHHHHHHhcC--CC--------------------CCC--------------------------CCcCCHHHHHHHHHHc
Confidence            33322211110  00                    000                          0123567899999999


Q ss_pred             ccCCCCCcCHHHHhc
Q 017021          354 RYDPTDRLTAREALR  368 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~  368 (379)
                      +.+|++||++.|+++
T Consensus       240 ~~~p~~Rp~~~~il~  254 (262)
T cd05058         240 HPKPEMRPTFSELVS  254 (262)
T ss_pred             CCChhhCCCHHHHHH
Confidence            999999999999985

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=4.6e-36  Score=274.61  Aligned_cols=261  Identities=23%  Similarity=0.310  Sum_probs=192.2

Q ss_pred             chhhhhhhhccccccceeEEEEEec----CCCceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDR----ERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~----~~~~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      ....|++.+.||+|+||.||+|...    .++..+|+|+++....  ....+..|+..+..+     .|++++++++++.
T Consensus         2 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l-----~~~~i~~~~~~~~   76 (284)
T cd05038           2 EKRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL-----DHENIVKYKGVCE   76 (284)
T ss_pred             chhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhC-----CCCChheEEeeee
Confidence            3456888899999999999999864    3478999999975444  356777888888877     6789999999887


Q ss_pred             e--cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          115 Y--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       115 ~--~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                      .  +...+++|||+ +++|.+++.... ..+++..+..++.|++.||+|||+.|++|+||||+||++             
T Consensus        77 ~~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~-------------  142 (284)
T cd05038          77 KPGGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV-------------  142 (284)
T ss_pred             cCCCCceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE-------------
Confidence            7  56899999999 899999997754 258999999999999999999999999999999999999             


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCCC------cccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhC
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN------YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG  265 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g  265 (379)
                                    +.+..++|+|||.+........      ...++..|+|||.+.+..++.++|+|||||++|+|++|
T Consensus       143 --------------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg  208 (284)
T cd05038         143 --------------ESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTY  208 (284)
T ss_pred             --------------cCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeecc
Confidence                          4456677777777654432211      12344569999999888899999999999999999999


Q ss_pred             CCCCCCCchHHHHHHHHHHcCCCCh-hHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          266 EALFQTHENLEHLAMMERVLGPLPQ-HMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       266 ~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      ..|+.......     ....++... .....+....   .......                          ....++.+
T Consensus       209 ~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~~--------------------------~~~~~~~~  254 (284)
T cd05038         209 GDPSQSPPAEF-----LRMIGIAQGQMIVTRLLELL---KEGERLP--------------------------RPPSCPDE  254 (284)
T ss_pred             CCCcccccchh-----ccccccccccccHHHHHHHH---HcCCcCC--------------------------CCccCCHH
Confidence            99886532211     001111000 0000000000   0000000                          01134567


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhc
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      +.+++.+||+.||++|||+.|+++
T Consensus       255 ~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         255 VYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             HHHHHHHHhccChhhCCCHHHHHH
Confidence            999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=6e-36  Score=277.03  Aligned_cols=247  Identities=21%  Similarity=0.245  Sum_probs=187.4

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCc----eEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKE----MVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~----~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      ....|++.+.||+|+||.||+|.+..+++    .||+|.+....  .....+..|+.++..+     .|+|++++++++.
T Consensus         5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-----~h~niv~~~~~~~   79 (303)
T cd05110           5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-----DHPHLVRLLGVCL   79 (303)
T ss_pred             chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCcccEEEEEc
Confidence            34456788999999999999999887775    57899886432  2223556777777776     7899999999886


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      .. ..+++++|+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++              
T Consensus        80 ~~-~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~--------------  143 (303)
T cd05110          80 SP-TIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK--------------  143 (303)
T ss_pred             CC-CceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeec--------------
Confidence            54 467899999 899999987653 3588999999999999999999999999999999999994              


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEA  267 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~  267 (379)
                                   .+..++|+|||.+.......     ....++..|+|||.+.+..++.++|||||||++|++++ |..
T Consensus       144 -------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~  210 (303)
T cd05110         144 -------------SPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGK  210 (303)
T ss_pred             -------------CCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCC
Confidence                         34456777777665432211     11234678999999988889999999999999999997 899


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ||.+....+....+.... .++                     .                          ....+..+.+
T Consensus       211 p~~~~~~~~~~~~~~~~~-~~~---------------------~--------------------------~~~~~~~~~~  242 (303)
T cd05110         211 PYDGIPTREIPDLLEKGE-RLP---------------------Q--------------------------PPICTIDVYM  242 (303)
T ss_pred             CCCCCCHHHHHHHHHCCC-CCC---------------------C--------------------------CCCCCHHHHH
Confidence            997654333222211100 000                     0                          0123457889


Q ss_pred             HHhhccccCCCCCcCHHHHhcC
Q 017021          348 LLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      ++..||..||++||+++++++.
T Consensus       243 li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         243 VMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             HHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999998864

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-37  Score=293.03  Aligned_cols=203  Identities=27%  Similarity=0.418  Sum_probs=177.9

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeec--cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec----
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR----  116 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~----  116 (379)
                      +.+...+.||+||||.||++++++||+.||+|.++.  .....+.+.+|++++.++     .|+|||+++++-++.    
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKL-----nh~NIVk~f~iee~~~~~~   87 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKL-----NHPNIVKLFDIEETKFLGL   87 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHc-----CchhhhhhcccCCccccCc
Confidence            555666899999999999999999999999999974  345678889999999999     689999999988754    


Q ss_pred             --ceEEEEEeCC-CCCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          117 --NHICIVFEKL-GSSLYDFLRKN-NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       117 --~~~~lv~e~~-~~sL~~~l~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                        +...+||||| ||||...+++. +...+++.+++.++..+..||.|||+.||+||||||.||++....          
T Consensus        88 ~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ge----------  157 (732)
T KOG4250|consen   88 VTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGE----------  157 (732)
T ss_pred             ccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecC----------
Confidence              3678999999 99999999873 334699999999999999999999999999999999999995432          


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                                   ++....||||||.|+....++  .+.+||..|.+||.... ..|+.-+|.|||||++|+.+||..||
T Consensus       158 -------------dgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF  224 (732)
T KOG4250|consen  158 -------------DGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPF  224 (732)
T ss_pred             -------------CCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCC
Confidence                         577789999999998766665  56789999999999985 77889999999999999999999999


Q ss_pred             CCCc
Q 017021          270 QTHE  273 (379)
Q Consensus       270 ~~~~  273 (379)
                      ....
T Consensus       225 ~p~~  228 (732)
T KOG4250|consen  225 IPFG  228 (732)
T ss_pred             CcCC
Confidence            7643

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.1e-38  Score=287.64  Aligned_cols=251  Identities=26%  Similarity=0.402  Sum_probs=211.5

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeec----cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ...+++..||-||||.|=++........+|+|++++    ..++.+....|..++...     ..+.|++++.-|.+.++
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~-----~s~fIvrLYrTfrd~ky  494 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMEC-----RSDFIVRLYRTFRDSKY  494 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhc-----CchHHHHHHHHhccchh
Confidence            345677999999999999998766555699999974    244556666788887776     57899999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      +|++||-| ||.|..++...+  .+....++.++..+++|++|||++|||.|||||+|.+++.                 
T Consensus       495 vYmLmEaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~-----------------  555 (732)
T KOG0614|consen  495 VYMLMEACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDN-----------------  555 (732)
T ss_pred             hhhhHHhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeecc-----------------
Confidence            99999999 999999998876  6999999999999999999999999999999999999954                 


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                                .+-+||.|||+|+......  -+++||+.|.|||++.+...+.++|.||||+++|||++|++||.+.++.
T Consensus       556 ----------~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm  625 (732)
T KOG0614|consen  556 ----------RGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM  625 (732)
T ss_pred             ----------CCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH
Confidence                      4556777888877555444  3468999999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      .+...|-+.+..                     +.                          ++...+..+.+||+++-..
T Consensus       626 ktYn~ILkGid~---------------------i~--------------------------~Pr~I~k~a~~Lik~LCr~  658 (732)
T KOG0614|consen  626 KTYNLILKGIDK---------------------IE--------------------------FPRRITKTATDLIKKLCRD  658 (732)
T ss_pred             HHHHHHHhhhhh---------------------hh--------------------------cccccchhHHHHHHHHHhc
Confidence            777666553211                     11                          1124667899999999999


Q ss_pred             CCCCCcC-----HHHHhcCCCCCC
Q 017021          356 DPTDRLT-----AREALRHPFFTR  374 (379)
Q Consensus       356 dP~~Rpt-----a~e~l~hp~f~~  374 (379)
                      +|.+|..     +.|+-+|.||..
T Consensus       659 ~P~ERLG~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  659 NPTERLGYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             CcHhhhccccCChHHHHhhhhhhc
Confidence            9999995     999999999975

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=1.5e-35  Score=269.96  Aligned_cols=245  Identities=17%  Similarity=0.217  Sum_probs=185.0

Q ss_pred             hhhhhccccccceeEEEEEec---CCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc-
Q 017021           45 DKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN-  117 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~-  117 (379)
                      |++.+.||+|+||.||+|.++   .+++.||+|++...   ......+..|+.++..+     .|++++++++++.... 
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~   75 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEF-----DHPNVIKLIGVSLRSRA   75 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcC-----CCCCcceEEEEEccCCC
Confidence            677899999999999999865   35789999998743   22344566788888877     7799999999875432 


Q ss_pred             -----eEEEEEeCC-CCCHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccC
Q 017021          118 -----HICIVFEKL-GSSLYDFLRKNN----YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  187 (379)
Q Consensus       118 -----~~~lv~e~~-~~sL~~~l~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~  187 (379)
                           ..+++++|+ +++|.+++....    ...++...+..++.|++.||+|||+.|++||||||+||+++        
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~--------  147 (273)
T cd05074          76 KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLN--------  147 (273)
T ss_pred             CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEc--------
Confidence                 357889999 899988875321    12478899999999999999999999999999999999994        


Q ss_pred             CCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHH
Q 017021          188 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL  262 (379)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l  262 (379)
                                         .+..++|+|||.+.......     ....++..|++||.+.+..++.++|||||||++|+|
T Consensus       148 -------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el  208 (273)
T cd05074         148 -------------------ENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEI  208 (273)
T ss_pred             -------------------CCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHH
Confidence                               44556677777665432211     122345679999999888899999999999999999


Q ss_pred             Hh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccc
Q 017021          263 CT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  341 (379)
Q Consensus       263 ~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (379)
                      ++ |..||...+..+....+.... .                     ...                          ....
T Consensus       209 ~~~g~~p~~~~~~~~~~~~~~~~~-~---------------------~~~--------------------------~~~~  240 (273)
T cd05074         209 MTRGQTPYAGVENSEIYNYLIKGN-R---------------------LKQ--------------------------PPDC  240 (273)
T ss_pred             hhCCCCCCCCCCHHHHHHHHHcCC-c---------------------CCC--------------------------CCCC
Confidence            98 889997655443332222110 0                     000                          0124


Q ss_pred             hhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          342 AGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       342 ~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      +..+.+++.+||+.+|++|||+.+++++
T Consensus       241 ~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         241 LEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            5689999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-36  Score=301.30  Aligned_cols=251  Identities=22%  Similarity=0.335  Sum_probs=205.3

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCc-----eEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEec
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKE-----MVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIR  110 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~-----~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~  110 (379)
                      ..++..+-.+.+.||+|+||.||.|....-..     .||+|.++..  ......+++|..++..+     +|+||++++
T Consensus       687 p~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f-----~HpNiv~li  761 (1025)
T KOG1095|consen  687 PEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKF-----DHPNIVSLI  761 (1025)
T ss_pred             ccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcC-----CCcceeeEE
Confidence            34556677788999999999999998764433     3999998743  45567888899999888     889999999


Q ss_pred             ceeeecceEEEEEeCC-CCCHHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccccc
Q 017021          111 NWFDYRNHICIVFEKL-GSSLYDFLRKNN-----YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI  184 (379)
Q Consensus       111 ~~~~~~~~~~lv~e~~-~~sL~~~l~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~  184 (379)
                      +.+-+..-.+|++||| ||+|..++....     ...++....+.++.+|++|..||+++++|||||..+|+|+      
T Consensus       762 Gv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL------  835 (1025)
T KOG1095|consen  762 GVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLL------  835 (1025)
T ss_pred             EeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheee------
Confidence            9999999999999999 999999998751     2358899999999999999999999999999999999999      


Q ss_pred             ccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcc-----cccCCccchhhhhCCCCCCccchHhHHHHH
Q 017021          185 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI-----VSTRHYRAPEVILGLGWTYPCDIWSVGCIL  259 (379)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~-----~gt~~y~aPE~~~~~~~~~~sDvwSlG~il  259 (379)
                                           +....+||+|||+|+......-+.     .-...|||||.+....++.++|||||||++
T Consensus       836 ---------------------~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVll  894 (1025)
T KOG1095|consen  836 ---------------------DERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLL  894 (1025)
T ss_pred             ---------------------cccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHH
Confidence                                 555778888888887333322111     123589999999999999999999999999


Q ss_pred             HHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhh
Q 017021          260 VELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV  338 (379)
Q Consensus       260 ~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (379)
                      ||+++ |..||...+..+.....                      .+.|+++.|.                         
T Consensus       895 WEifslG~~PY~~~~n~~v~~~~----------------------~~ggRL~~P~-------------------------  927 (1025)
T KOG1095|consen  895 WEIFSLGATPYPSRSNFEVLLDV----------------------LEGGRLDPPS-------------------------  927 (1025)
T ss_pred             HHHHhCCCCCCCCcchHHHHHHH----------------------HhCCccCCCC-------------------------
Confidence            99999 99999988876665422                      2223333333                         


Q ss_pred             ccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          339 DHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       339 ~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                       .++..+.++|.+||+.+|++||+...+++
T Consensus       928 -~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  928 -YCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             -CCChHHHHHHHHHccCChhhCccHHHHHh
Confidence             46778999999999999999999999986

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=6.7e-38  Score=267.03  Aligned_cols=257  Identities=21%  Similarity=0.371  Sum_probs=199.7

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .-+=+..||.|+||+|++..++.+|+..|+|++...  .+...++..|.+...+-    .+.++||++++..-.++--|+
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks----~~cp~IVkfyGa~F~EGdcWi  140 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKS----SNCPNIVKFYGALFSEGDCWI  140 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhh----cCCcHHHHHhhhhhcCCceee
Confidence            334458999999999999999999999999999753  23445555566554332    367899999999888889999


Q ss_pred             EEeCCCCCHHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHH-HcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          122 VFEKLGSSLYDFLRK---NNYRSFPIDLVREIARQLLECIAFMH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       122 v~e~~~~sL~~~l~~---~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .||+|..||..+-..   -....+++..+-.+....+.||+||- ...|||||+||+|||+                   
T Consensus       141 CMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl-------------------  201 (361)
T KOG1006|consen  141 CMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL-------------------  201 (361)
T ss_pred             eHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE-------------------
Confidence            999998887665432   12235889888899999999999997 5789999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhC--CCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                              +..+.+||||||.+......-  ..-.|...|+|||.+..  ..|+.+||+||||+++||++||..||.+-+
T Consensus       202 --------dr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~  273 (361)
T KOG1006|consen  202 --------DRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD  273 (361)
T ss_pred             --------ecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH
Confidence                    566778888888876433221  22368899999999864  358999999999999999999999998754


Q ss_pred             hHHHHHHHHHHc-CCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          274 NLEHLAMMERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       274 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +  .+.++.++. |.+|--..                  +                       ...-+++..++.+|.-|
T Consensus       274 s--vfeql~~Vv~gdpp~l~~------------------~-----------------------~~~~~~s~~~~~fintC  310 (361)
T KOG1006|consen  274 S--VFEQLCQVVIGDPPILLF------------------D-----------------------KECVHYSFSMVRFINTC  310 (361)
T ss_pred             H--HHHHHHHHHcCCCCeecC------------------c-----------------------ccccccCHHHHHHHHHH
Confidence            4  566666654 44332100                  0                       00124778999999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      |.+|-+.||..++++++||+..
T Consensus       311 l~Kd~~~Rpky~~Lk~~~fyr~  332 (361)
T KOG1006|consen  311 LIKDRSDRPKYDDLKKFPFYRM  332 (361)
T ss_pred             hhcccccCcchhhhhcCchhhh
Confidence            9999999999999999999864

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=100.00  E-value=3e-37  Score=298.49  Aligned_cols=252  Identities=24%  Similarity=0.317  Sum_probs=192.7

Q ss_pred             hcccccccee-EEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCCC
Q 017021           49 SKMGEGTFGQ-VLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG  127 (379)
Q Consensus        49 ~~Lg~G~~g~-V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~  127 (379)
                      +.+|.|+-|+ ||+|.  ..|+.||+|++-  ......+.+|+..++.-    ..|+||+++++.-.++.+.||+.|+|.
T Consensus       515 eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll--~e~~~~A~rEi~lL~eS----D~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  515 EILGYGSNGTVVFRGV--YEGREVAVKRLL--EEFFDFAQREIQLLQES----DEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             HHcccCCCCcEEEEEe--eCCceehHHHHh--hHhHHHHHHHHHHHHhc----cCCCceEEEEeeccCCceEEEEehHhh
Confidence            7889999985 59996  457899999985  33345667788877654    478999999999999999999999999


Q ss_pred             CCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccC
Q 017021          128 SSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  205 (379)
Q Consensus       128 ~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (379)
                      .+|.+++...  ..........+....|++.||++||+.+|+||||||+||||....                      +
T Consensus       587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~----------------------~  644 (903)
T KOG1027|consen  587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPS----------------------A  644 (903)
T ss_pred             hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccC----------------------C
Confidence            9999999884  111122256678899999999999999999999999999995321                      1


Q ss_pred             CCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHHH
Q 017021          206 PKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHL  278 (379)
Q Consensus       206 ~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~  278 (379)
                      .+...++|.|||+++......      ....||-+|+|||++....-+.++||+||||++|+.++ |+.||...-..+  
T Consensus       645 ~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--  722 (903)
T KOG1027|consen  645 DGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--  722 (903)
T ss_pred             CcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh--
Confidence            455778999999988765554      23468999999999998888889999999999999888 599997432211  


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCC
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  358 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  358 (379)
                      ..|..  +...                               +.      .+.     ..+++  ++.|||.+|+.+||.
T Consensus       723 ~NIl~--~~~~-------------------------------L~------~L~-----~~~d~--eA~dLI~~ml~~dP~  756 (903)
T KOG1027|consen  723 ANILT--GNYT-------------------------------LV------HLE-----PLPDC--EAKDLISRMLNPDPQ  756 (903)
T ss_pred             hhhhc--Cccc-------------------------------ee------eec-----cCchH--HHHHHHHHhcCCCcc
Confidence            11111  0000                               00      000     00111  899999999999999


Q ss_pred             CCcCHHHHhcCCCCCCCCcC
Q 017021          359 DRLTAREALRHPFFTRDHLR  378 (379)
Q Consensus       359 ~Rpta~e~l~hp~f~~~~~~  378 (379)
                      .||+|.+||.||||+..+.|
T Consensus       757 ~RPsa~~VL~HPlFW~~ekr  776 (903)
T KOG1027|consen  757 LRPSATDVLNHPLFWDSEKR  776 (903)
T ss_pred             cCCCHHHHhCCCccCChHHH
Confidence            99999999999999987643

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=7.3e-35  Score=264.95  Aligned_cols=244  Identities=21%  Similarity=0.238  Sum_probs=177.1

Q ss_pred             hccccccceeEEEEEecCC--CceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRER--KEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~--~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      ++||+|+||.||++....+  ...+++|.++...  .....+.+|...+..+     .|+|++++++.+......|+|||
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-----~h~~iv~~~~~~~~~~~~~lv~e   75 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRIL-----QHPNILQCLGQCVEAIPYLLVFE   75 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhcc-----CCcchhheEEEecCCCccEEEEe
Confidence            3689999999999975433  3456777765332  2345667777777766     78999999999999999999999


Q ss_pred             CC-CCCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          125 KL-GSSLYDFLRKNN--YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      |+ +++|.+++....  ...++...+..++.||+.||+|||+.+++||||||+||+++                      
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~----------------------  133 (268)
T cd05086          76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLT----------------------  133 (268)
T ss_pred             cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEc----------------------
Confidence            99 899999997642  22466778889999999999999999999999999999994                      


Q ss_pred             cccCCCCCCeEEeecCcccccCC-----CCCcccccCCccchhhhhC-------CCCCCccchHhHHHHHHHHHh-CCCC
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERP-----DQNYIVSTRHYRAPEVILG-------LGWTYPCDIWSVGCILVELCT-GEAL  268 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlG~il~~l~~-g~~p  268 (379)
                           .++.++|+|||.+.....     ......++..|+|||++..       ..++.++|||||||++|+|++ |..|
T Consensus       134 -----~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p  208 (268)
T cd05086         134 -----SDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQP  208 (268)
T ss_pred             -----CCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCC
Confidence                 445567777776542111     1123457889999998743       245789999999999999997 5778


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |...+..+....+.+....                      ..+.              +       ......++.+.++
T Consensus       209 ~~~~~~~~~~~~~~~~~~~----------------------~~~~--------------~-------~~~~~~~~~~~~l  245 (268)
T cd05086         209 YSHLSDREVLNHVIKDQQV----------------------KLFK--------------P-------QLELPYSERWYEV  245 (268)
T ss_pred             CCCCCHHHHHHHHHhhccc----------------------ccCC--------------C-------ccCCCCcHHHHHH
Confidence            8765554433322211100                      0000              0       0011245678889


Q ss_pred             HhhccccCCCCCcCHHHHhc
Q 017021          349 LQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~  368 (379)
                      +..|| .||++||+++|+++
T Consensus       246 ~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         246 LQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHHh-hCcccCCCHHHHHH
Confidence            99999 68999999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=100.00  E-value=4.4e-37  Score=277.72  Aligned_cols=335  Identities=25%  Similarity=0.357  Sum_probs=229.6

Q ss_pred             cceeeeeeeeeechhhhhhhhccccccceeEEEEEecC---CCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCe
Q 017021           29 CNMFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRE---RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR  105 (379)
Q Consensus        29 ~~~~~~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~---~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~  105 (379)
                      ..+.+..++.++....|+++++||.|.|++||++.+..   .++.||+|.+... .....+..|++.+..+.    ++.|
T Consensus        22 ee~~~l~q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t-s~p~ri~~El~~L~~~g----G~~n   96 (418)
T KOG1167|consen   22 EEIEQLRQDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT-SSPSRILNELEMLYRLG----GSDN   96 (418)
T ss_pred             hHHHHHHhhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc-cCchHHHHHHHHHHHhc----cchh
Confidence            45566677788888999999999999999999999887   7899999999743 34667888999999984    5578


Q ss_pred             eEEecceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecc-cc
Q 017021          106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSS-EY  183 (379)
Q Consensus       106 i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~-~~  183 (379)
                      |+.+.+++..++.+.+|+||+ .....++...     ++...+..+++.++.||.++|+.||+|||+||.|++++.. +.
T Consensus        97 i~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~r  171 (418)
T KOG1167|consen   97 IIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQR  171 (418)
T ss_pred             hhcchhhhccCCeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCC
Confidence            999999999999999999999 6777777654     7788999999999999999999999999999999999765 66


Q ss_pred             cccCCCccCCCCCCC-----Ccc---cccCC-CCCCeEEeec-------CcccccCCC----CCcccccCCccchhhhhC
Q 017021          184 IKVPDYKSSLHTPKD-----SSY---FKRMP-KSSAIKVIDF-------GSTTYERPD----QNYIVSTRHYRAPEVILG  243 (379)
Q Consensus       184 ~~~~~~~~~~~~~~~-----~~~---~~~~~-~~~~~~l~Df-------g~~~~~~~~----~~~~~gt~~y~aPE~~~~  243 (379)
                      ..+.|||++......     +..   ..... ....+-....       |.....+..    .....||++|.|||++..
T Consensus       172 g~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k  251 (418)
T KOG1167|consen  172 GVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR  251 (418)
T ss_pred             ceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhh
Confidence            678999999621110     000   00001 0101000000       000000011    123579999999999987


Q ss_pred             CC-CCCccchHhHHHHHHHHHhCCCCCCC-CchHHHHHHHHHHcCCCChhHHHhhhhhhhh--hhcc-CCCCCCCCCCch
Q 017021          244 LG-WTYPCDIWSVGCILVELCTGEALFQT-HENLEHLAMMERVLGPLPQHMLKRVDRHAEK--YVRR-GRLDWPEGAASR  318 (379)
Q Consensus       244 ~~-~~~~sDvwSlG~il~~l~~g~~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~  318 (379)
                      .+ .+.+.||||.|+|+..++++..||-. .++.+...++...+|.-  ++.+ .......  ..+. .....++.....
T Consensus       252 ~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~--~mrk-~A~l~g~~~l~~ksn~~~~~e~~~~f  328 (418)
T KOG1167|consen  252 CPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSA--EMRK-CAALPGRILLWQKSNIPTIPELRVNF  328 (418)
T ss_pred             ccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChH--HHHH-HhhcCCceeeeccccccccHHHHhch
Confidence            55 57899999999999999999999754 45556666666666542  2222 1111111  1110 011111111112


Q ss_pred             hhhh--hhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          319 ESIK--SVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       319 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +.+.  .....+..........+..+..+.||+.+||..||.+|.||+++|+||||.+-+
T Consensus       329 ~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~  388 (418)
T KOG1167|consen  329 ETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEAD  388 (418)
T ss_pred             hccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchh
Confidence            2221  111111110122233345666899999999999999999999999999998644

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.2e-36  Score=262.28  Aligned_cols=271  Identities=21%  Similarity=0.355  Sum_probs=209.6

Q ss_pred             eeeeeeeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCee
Q 017021           31 MFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRC  106 (379)
Q Consensus        31 ~~~~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i  106 (379)
                      |-........+-..|+++++||+|+|+.|.+++.+.|.+.+|+|++++.    +..-.....|..+..+.    .++|.+
T Consensus       238 m~g~~~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~a----sn~pfl  313 (593)
T KOG0695|consen  238 MDGIKISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA----SNNPFL  313 (593)
T ss_pred             ccccccccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhc----cCCCeE
Confidence            3334445556667789999999999999999999999999999999742    22222333344444443    578999


Q ss_pred             EEecceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccc
Q 017021          107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK  185 (379)
Q Consensus       107 ~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~  185 (379)
                      +-++..|.++..+++|.||. ||+|--.++++.  .++++.++.+..+|+.||.|||++||+.||+|.+|+|+       
T Consensus       314 vglhscfqtesrlffvieyv~ggdlmfhmqrqr--klpeeharfys~ei~lal~flh~rgiiyrdlkldnvll-------  384 (593)
T KOG0695|consen  314 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL-------  384 (593)
T ss_pred             EehhhhhcccceEEEEEEEecCcceeeehhhhh--cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE-------
Confidence            99999999999999999999 999887777765  79999999999999999999999999999999999999       


Q ss_pred             cCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHH
Q 017021          186 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL  262 (379)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l  262 (379)
                                          +..+.+||+|+|+++..-.+   .++.+||+.|.|||++.+..|++.+|.|+||++++||
T Consensus       385 --------------------daeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfem  444 (593)
T KOG0695|consen  385 --------------------DAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEM  444 (593)
T ss_pred             --------------------ccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHH
Confidence                                77788899999988753333   3567999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccch
Q 017021          263 CTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  342 (379)
Q Consensus       263 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (379)
                      +.|+.||.-....            .|+.   ..++++-+.+-...+.+|.                          ..+
T Consensus       445 magrspfdivgm~------------n~d~---ntedylfqvilekqiripr--------------------------sls  483 (593)
T KOG0695|consen  445 MAGRSPFDIVGMD------------NPDM---NTEDYLFQVILEKQIRIPR--------------------------SLS  483 (593)
T ss_pred             HcCCCCcceecCC------------Cccc---chhHHHHHHHhhhcccccc--------------------------eee
Confidence            9999999642110            0000   0111111111122222221                          244


Q ss_pred             hHHHHHHhhccccCCCCCc------CHHHHhcCCCCCCC
Q 017021          343 GDLTHLLQGLLRYDPTDRL------TAREALRHPFFTRD  375 (379)
Q Consensus       343 ~~~~~li~~~L~~dP~~Rp------ta~e~l~hp~f~~~  375 (379)
                      -.+..++..-|.+||.+|.      ..+++..||||...
T Consensus       484 vkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~i  522 (593)
T KOG0695|consen  484 VKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSI  522 (593)
T ss_pred             hhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence            5677788999999999998      47899999999754

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-35  Score=276.75  Aligned_cols=244  Identities=22%  Similarity=0.338  Sum_probs=207.9

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  123 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~  123 (379)
                      .....++||-|.||.||.+.++.-.-.||||.++.+.-...++++|..++..+     .|+|+|++++.+..+.-+|||+
T Consensus       268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKei-----kHpNLVqLLGVCT~EpPFYIiT  342 (1157)
T KOG4278|consen  268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-----KHPNLVQLLGVCTHEPPFYIIT  342 (1157)
T ss_pred             heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhh-----cCccHHHHhhhhccCCCeEEEE
Confidence            34456899999999999999999889999999997777778999999999999     8899999999999999999999


Q ss_pred             eCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          124 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       124 e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      ||| .|+|.+++.......++.-.++.++.||..|++||.++++|||||-.+|+|+                        
T Consensus       343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLV------------------------  398 (1157)
T KOG4278|consen  343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV------------------------  398 (1157)
T ss_pred             ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccc------------------------
Confidence            999 9999999988766678888999999999999999999999999999999999                        


Q ss_pred             ccCCCCCCeEEeecCcccccCCCCCc-ccc---cCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHH
Q 017021          203 KRMPKSSAIKVIDFGSTTYERPDQNY-IVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  277 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~~~~~-~~g---t~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~  277 (379)
                         ..+..+|++|||+++....+.-+ ..|   .+.|.|||.+....++.++|||+|||+|||++| |..||.+-+....
T Consensus       399 ---gEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqV  475 (1157)
T KOG4278|consen  399 ---GENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV  475 (1157)
T ss_pred             ---cccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHH
Confidence               66778888888888766555422 122   457999999999999999999999999999998 9999998766555


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+++..                      +++-                          .+.+++...+|++.||+++|
T Consensus       476 Y~LLEkgy----------------------RM~~--------------------------PeGCPpkVYeLMraCW~WsP  507 (1157)
T KOG4278|consen  476 YGLLEKGY----------------------RMDG--------------------------PEGCPPKVYELMRACWNWSP  507 (1157)
T ss_pred             HHHHhccc----------------------cccC--------------------------CCCCCHHHHHHHHHHhcCCc
Confidence            44443321                      1111                          23578899999999999999


Q ss_pred             CCCcCHHHHh
Q 017021          358 TDRLTAREAL  367 (379)
Q Consensus       358 ~~Rpta~e~l  367 (379)
                      ++||+.+|+-
T Consensus       508 sDRPsFaeiH  517 (1157)
T KOG4278|consen  508 SDRPSFAEIH  517 (1157)
T ss_pred             ccCccHHHHH
Confidence            9999998874

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-35  Score=266.40  Aligned_cols=258  Identities=23%  Similarity=0.266  Sum_probs=191.4

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc----e
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN----H  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~----~  118 (379)
                      .+.++.+.||+|.||.||+|.++  |+.||||++...  .+..+.+|.++.+..+.   .|+||+.++..-..++    .
T Consensus       211 rqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr--dE~SWfrEtEIYqTvmL---RHENILgFIaaD~~~~gs~TQ  283 (513)
T KOG2052|consen  211 RQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR--DERSWFRETEIYQTVML---RHENILGFIAADNKDNGSWTQ  283 (513)
T ss_pred             heeEEEEEecCccccceeecccc--CCceEEEEeccc--chhhhhhHHHHHHHHHh---ccchhhhhhhccccCCCceEE
Confidence            34567899999999999999766  688999999743  36778889999999866   7789999888766443    6


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-----c---CCcccCCCCCcEEEecccccccCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-----L---CMIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-----~---~iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                      +|+|++|. .|||.|++...   .++.+..+++++.++.||+|||-     +   .|.|||||..|||++.++       
T Consensus       284 LwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~-------  353 (513)
T KOG2052|consen  284 LWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG-------  353 (513)
T ss_pred             EEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCC-------
Confidence            89999999 99999999985   59999999999999999999994     2   399999999999995555       


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC-------CCcccccCCccchhhhhCCC----CC--CccchHhHH
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYIVSTRHYRAPEVILGLG----WT--YPCDIWSVG  256 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~----~~--~~sDvwSlG  256 (379)
                                          .+.|+|+|+|......       .+..+||.+|||||++....    +.  ..+||||||
T Consensus       354 --------------------~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafg  413 (513)
T KOG2052|consen  354 --------------------TCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFG  413 (513)
T ss_pred             --------------------cEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHH
Confidence                                4555555555432222       25568999999999997632    22  568999999


Q ss_pred             HHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHH
Q 017021          257 CILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ  336 (379)
Q Consensus       257 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (379)
                      +++||++.+-.-= + -                           ....+-+.+++.+...+.|.+..++...+.+..+..
T Consensus       414 LVlWEiarRc~~g-g-i---------------------------~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipn  464 (513)
T KOG2052|consen  414 LVLWEIARRCESG-G-I---------------------------VEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPN  464 (513)
T ss_pred             HHHHHHHHHhhcC-C-E---------------------------ehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCc
Confidence            9999998642110 0 0                           000111223444445556666666666666655555


Q ss_pred             hhcc--chhHHHHHHhhccccCCCCCcCHHHH
Q 017021          337 HVDH--SAGDLTHLLQGLLRYDPTDRLTAREA  366 (379)
Q Consensus       337 ~~~~--~~~~~~~li~~~L~~dP~~Rpta~e~  366 (379)
                      .|..  .-..+.++++.||..||..|.||=-+
T Consensus       465 rW~s~~~l~~m~klMkeCW~~Np~aRltALri  496 (513)
T KOG2052|consen  465 RWKSDPALRVMAKLMKECWYANPAARLTALRI  496 (513)
T ss_pred             ccccCHHHHHHHHHHHHhhcCCchhhhHHHHH
Confidence            5543  33568889999999999999987433

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=6.2e-36  Score=287.12  Aligned_cols=243  Identities=23%  Similarity=0.363  Sum_probs=210.0

Q ss_pred             hhhhhccccccceeEEEEEecCCC---ceEEEEEeec--cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERK---EMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~---~~vAiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .+|.++||.|.||.|++|+.+..|   ..||||.++.  .++++..++.|..++.++     +||||+++.+.....+-+
T Consensus       631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF-----dHPNIIrLEGVVTks~Pv  705 (996)
T KOG0196|consen  631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF-----DHPNIIRLEGVVTKSKPV  705 (996)
T ss_pred             eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC-----CCCcEEEEEEEEecCcee
Confidence            358899999999999999988665   6699999984  467788999999999998     899999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      .||+||| .|+|..+|..+.+ .++..++..+++.|+.|++||-+.+++||||-.+|||+                    
T Consensus       706 MIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV--------------------  764 (996)
T KOG0196|consen  706 MIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV--------------------  764 (996)
T ss_pred             EEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee--------------------
Confidence            9999999 9999999998874 49999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCCCcc---c-c--cCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCC
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYI---V-S--TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQT  271 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~---~-g--t~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~  271 (379)
                             +.+..+|+.|||+++..+.+....   . |  ..+|.|||.+..++++.+|||||+|++|||.++ |..||..
T Consensus       765 -------NsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd  837 (996)
T KOG0196|consen  765 -------NSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD  837 (996)
T ss_pred             -------ccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc
Confidence                   566677777777776544433211   1 2  258999999999999999999999999999886 9999998


Q ss_pred             CchHHHHHHHHHHcC-CCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          272 HENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      .++.+....+++... |+|-                                                 .++..+..|+.
T Consensus       838 mSNQdVIkaIe~gyRLPpPm-------------------------------------------------DCP~aL~qLMl  868 (996)
T KOG0196|consen  838 MSNQDVIKAIEQGYRLPPPM-------------------------------------------------DCPAALYQLML  868 (996)
T ss_pred             cchHHHHHHHHhccCCCCCC-------------------------------------------------CCcHHHHHHHH
Confidence            888888888888653 3331                                                 37789999999


Q ss_pred             hccccCCCCCcCHHHHhcC
Q 017021          351 GLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~h  369 (379)
                      .||++|-.+||..+|++++
T Consensus       869 dCWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  869 DCWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             HHHHHHhhcCCCHHHHHHH
Confidence            9999999999999999864

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=100.00  E-value=5.1e-34  Score=276.54  Aligned_cols=272  Identities=22%  Similarity=0.350  Sum_probs=180.8

Q ss_pred             chhhhhhhhccccccceeEEEEEec----------------CCCceEEEEEeeccch-hh--------------HhHHHH
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDR----------------ERKEMVAIKIVRGIKK-YR--------------EAAMIE   89 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~----------------~~~~~vAiK~~~~~~~-~~--------------~~~~~e   89 (379)
                      ....|++.++||+|+||.||+|.+.                ..++.||||.+..... ..              .....|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            4557889999999999999999752                3356799999864221 11              122335


Q ss_pred             HHHHHHHHhcCCCCCeeEEecceeee--------cceEEEEEeCC-CCCHHHHHHhCCC---------------------
Q 017021           90 IEVLQQLAKHDKGGNRCVQIRNWFDY--------RNHICIVFEKL-GSSLYDFLRKNNY---------------------  139 (379)
Q Consensus        90 ~~~l~~l~~~~~~~~~i~~~~~~~~~--------~~~~~lv~e~~-~~sL~~~l~~~~~---------------------  139 (379)
                      ...+.++.+....+.+++.+.+++..        .+..++||||+ +++|.+++.....                     
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            55666664443334456677766643        35689999999 8999999874311                     


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCc
Q 017021          140 -RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS  218 (379)
Q Consensus       140 -~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~  218 (379)
                       ..+++..+..++.|++.||.|||+.+++||||||+||++                           +.+..++|+|||.
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl---------------------------~~~~~~kL~DFGl  355 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLV---------------------------TVDGQVKIIDFGA  355 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEE---------------------------CCCCcEEEEeCcC
Confidence             123566788999999999999999999999999999999                           4455678888887


Q ss_pred             ccccCCCC----CcccccCCccchhhhhCCC--------------------CC--CccchHhHHHHHHHHHhCCC-CCCC
Q 017021          219 TTYERPDQ----NYIVSTRHYRAPEVILGLG--------------------WT--YPCDIWSVGCILVELCTGEA-LFQT  271 (379)
Q Consensus       219 ~~~~~~~~----~~~~gt~~y~aPE~~~~~~--------------------~~--~~sDvwSlG~il~~l~~g~~-pf~~  271 (379)
                      +.......    ....+|+.|+|||.+....                    ++  .+.|+||+||++|+|+++.. ||..
T Consensus       356 a~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~  435 (507)
T PLN03224        356 AVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVAN  435 (507)
T ss_pred             ccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence            75432221    1123478999999875322                    12  34799999999999999875 6643


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      ......  .+.+ .....    +.+.     .......+++                        .++..++.++||+.+
T Consensus       436 ~~~f~~--~~~~-~~~~~----~~~r-----~~~~~~~~~~------------------------~~d~~s~~~~dLi~~  479 (507)
T PLN03224        436 IRLFNT--ELRQ-YDNDL----NRWR-----MYKGQKYDFS------------------------LLDRNKEAGWDLACK  479 (507)
T ss_pred             hhhhhh--HHhh-ccchH----HHHH-----hhcccCCCcc------------------------cccccChHHHHHHHH
Confidence            211110  0000 00000    0000     0001111111                        234567899999999


Q ss_pred             ccccCC---CCCcCHHHHhcCCCCCCC
Q 017021          352 LLRYDP---TDRLTAREALRHPFFTRD  375 (379)
Q Consensus       352 ~L~~dP---~~Rpta~e~l~hp~f~~~  375 (379)
                      ||..+|   .+|+||+|+|+||||..+
T Consensus       480 LL~~~~~~~~~RlSa~eaL~Hp~f~~~  506 (507)
T PLN03224        480 LITKRDQANRGRLSVGQALSHRFFLPE  506 (507)
T ss_pred             HhccCCCCcccCCCHHHHhCCCCcCCC
Confidence            999866   689999999999999753

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=8e-34  Score=252.75  Aligned_cols=238  Identities=37%  Similarity=0.607  Sum_probs=190.5

Q ss_pred             cceeEEEEEecCCCceEEEEEeeccchh--hHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-CCCHH
Q 017021           55 TFGQVLECWDRERKEMVAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLY  131 (379)
Q Consensus        55 ~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~sL~  131 (379)
                      +||.||+|.+..+++.+|+|++......  ...+..|+..++.+     .|++++++.+.+......++++|++ +++|.
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-----~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~   75 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKL-----KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLF   75 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhC-----CCCcHHHHHhheeeCCEEEEEEeCCCCCCHH
Confidence            5899999999989999999999743322  46777788888877     7789999999999999999999999 66999


Q ss_pred             HHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCe
Q 017021          132 DFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI  211 (379)
Q Consensus       132 ~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (379)
                      +++....  .++...+..++.+++.++.+||+.+++|+|++|+||++                           ..++.+
T Consensus        76 ~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~---------------------------~~~~~~  126 (244)
T smart00220       76 DLLKKRG--RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILL---------------------------DEDGHV  126 (244)
T ss_pred             HHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEE---------------------------CCCCcE
Confidence            9997754  38899999999999999999999999999999999999                           445667


Q ss_pred             EEeecCcccccCCC--CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC-chHHHHHHHHHHcCCC
Q 017021          212 KVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLAMMERVLGPL  288 (379)
Q Consensus       212 ~l~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~-~~~~~~~~~~~~~~~~  288 (379)
                      +|+|||.+......  .....++..|++||...+..++.++|+||||++++++++|..||... +.......+.......
T Consensus       127 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~  206 (244)
T smart00220      127 KLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF  206 (244)
T ss_pred             EEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC
Confidence            78888877654442  23456788999999998888899999999999999999999999763 3222222221111111


Q ss_pred             ChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          289 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      +.                                              .....+.++.+++.+||..||++||++.++++
T Consensus       207 ~~----------------------------------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      207 PP----------------------------------------------PEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             cc----------------------------------------------ccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            00                                              00014568999999999999999999999999


Q ss_pred             CCCC
Q 017021          369 HPFF  372 (379)
Q Consensus       369 hp~f  372 (379)
                      ||||
T Consensus       241 ~~~~  244 (244)
T smart00220      241 HPFF  244 (244)
T ss_pred             CCCC
Confidence            9997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=7.5e-35  Score=273.44  Aligned_cols=247  Identities=22%  Similarity=0.340  Sum_probs=200.7

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCC--C--ceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRER--K--EMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~--~--~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      .+.+....+.++||.|-||.||.|.....  |  --||||..+.+  ....+.++.|..+++.+     +||||+++++.
T Consensus       385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnf-----dHphIikLIGv  459 (974)
T KOG4257|consen  385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNF-----DHPHIIKLIGV  459 (974)
T ss_pred             eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhC-----CCcchhheeee
Confidence            34445556778999999999999976432  2  34899998753  34467888999999998     88999999999


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                      +.+.. .|||||++ -|.|.++++... ..++......+++||+.||.|||+..++||||-.+|||+             
T Consensus       460 ~~e~P-~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLV-------------  524 (974)
T KOG4257|consen  460 CVEQP-MWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILV-------------  524 (974)
T ss_pred             eeccc-eeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheee-------------
Confidence            97664 89999999 899999998765 369999999999999999999999999999999999999             


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcc----cccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CC
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI----VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GE  266 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~----~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~  266 (379)
                                    .+...+||+|||+++....+.-..    .-...|+|||.++.+.++.+||||.|||++||++. |.
T Consensus       525 --------------sSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGv  590 (974)
T KOG4257|consen  525 --------------SSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGV  590 (974)
T ss_pred             --------------cCcceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcC
Confidence                          666778888888888766654221    12458999999999999999999999999999987 99


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||.+....+....+++..                      +++.|                          +.+++.+.
T Consensus       591 kPfqgvkNsDVI~~iEnGe----------------------RlP~P--------------------------~nCPp~LY  622 (974)
T KOG4257|consen  591 KPFQGVKNSDVIGHIENGE----------------------RLPCP--------------------------PNCPPALY  622 (974)
T ss_pred             CccccccccceEEEecCCC----------------------CCCCC--------------------------CCCChHHH
Confidence            9998866555443333321                      22222                          35788999


Q ss_pred             HHHhhccccCCCCCcCHHHHh
Q 017021          347 HLLQGLLRYDPTDRLTAREAL  367 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l  367 (379)
                      .|+.+||++||.+||...++.
T Consensus       623 slmskcWayeP~kRPrftei~  643 (974)
T KOG4257|consen  623 SLMSKCWAYEPSKRPRFTEIK  643 (974)
T ss_pred             HHHHHHhccCcccCCcHHHHH
Confidence            999999999999999988765

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-35  Score=265.61  Aligned_cols=262  Identities=23%  Similarity=0.400  Sum_probs=199.8

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhh--------HhHHHHHHHHHHHHhcCCCCCeeEEec
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR--------EAAMIEIEVLQQLAKHDKGGNRCVQIR  110 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~--------~~~~~e~~~l~~l~~~~~~~~~i~~~~  110 (379)
                      ..-...|-++..||+|||+.||+|.|...++.||+|+-..+..|+        ..+.+|..+-..+     +|+.||+++
T Consensus       459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-----DHpRIVKlY  533 (775)
T KOG1151|consen  459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-----DHPRIVKLY  533 (775)
T ss_pred             cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-----Ccceeeeee
Confidence            344568999999999999999999999999999999976544443        3344566665555     889999999


Q ss_pred             ceee-ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH--cCCcccCCCCCcEEEeccccccc
Q 017021          111 NWFD-YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD--LCMIHTDLKPENVLLVSSEYIKV  186 (379)
Q Consensus       111 ~~~~-~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~--~~iiH~dlkp~Nili~~~~~~~~  186 (379)
                      ++|. +.+.+|-|+||| |.+|.-++..+.  .+++.+++.|+.||+.||.||..  ..|||=||||.|||+.+.     
T Consensus       534 DyfslDtdsFCTVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~G-----  606 (775)
T KOG1151|consen  534 DYFSLDTDSFCTVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNG-----  606 (775)
T ss_pred             eeeeeccccceeeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecC-----
Confidence            9997 456799999999 888877777654  79999999999999999999995  469999999999999542     


Q ss_pred             CCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCC----------cccccCCccchhhhhC----CCCCCccch
Q 017021          187 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN----------YIVSTRHYRAPEVILG----LGWTYPCDI  252 (379)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~----------~~~gt~~y~aPE~~~~----~~~~~~sDv  252 (379)
                                         ...+.+||+|||+++.....+.          -..||-.|++||.+.-    ...+.++||
T Consensus       607 -------------------tacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDV  667 (775)
T KOG1151|consen  607 -------------------TACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDV  667 (775)
T ss_pred             -------------------cccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceee
Confidence                               3456677777777776555441          1358899999998743    237899999


Q ss_pred             HhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHH
Q 017021          253 WSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN  332 (379)
Q Consensus       253 wSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (379)
                      ||+|||+|..+.|+.||.-.......-+-..++..                   ....+|.                   
T Consensus       668 WSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkA-------------------tEVqFP~-------------------  709 (775)
T KOG1151|consen  668 WSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKA-------------------TEVQFPP-------------------  709 (775)
T ss_pred             EeeehhhhhhhccCCCCCCchhHHHHHhhhchhcc-------------------eeccCCC-------------------
Confidence            99999999999999999753321111110000100                   0001111                   


Q ss_pred             HHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          333 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       333 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                           -+..++++.+||++||++--++|....|+-.||||--
T Consensus       710 -----KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  710 -----KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             -----CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence                 1246789999999999999999999999999999865

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-34  Score=271.36  Aligned_cols=252  Identities=21%  Similarity=0.265  Sum_probs=205.2

Q ss_pred             eeeeeechhhhhhhhccccccceeEEEEEecCCC---ceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEe
Q 017021           35 ITYIVFSAFADKIHSKMGEGTFGQVLECWDRERK---EMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQI  109 (379)
Q Consensus        35 ~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~---~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~  109 (379)
                      -..+++.+...++.++||+|.||.|++|.++..+   ..||||.+.....  .-..+.+|+.++..+     .|++++++
T Consensus       102 ~lkclIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L-----~H~hliRL  176 (1039)
T KOG0199|consen  102 DLKCLIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKL-----QHPHLIRL  176 (1039)
T ss_pred             CcceeccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhc-----cCcceeEE
Confidence            3457888999999999999999999999887443   5699999974322  357788999999998     88999999


Q ss_pred             cceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCC
Q 017021          110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD  188 (379)
Q Consensus       110 ~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~  188 (379)
                      ++..-+ .-..+|||++ .|+|.+.+.+.....|....+..++.||+.|+.||.++++|||||-.+|+++..        
T Consensus       177 yGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas--------  247 (1039)
T KOG0199|consen  177 YGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS--------  247 (1039)
T ss_pred             eeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc--------
Confidence            999987 5678999999 999999998844457889999999999999999999999999999999999944        


Q ss_pred             CccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcc------cccCCccchhhhhCCCCCCccchHhHHHHHHHH
Q 017021          189 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI------VSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL  262 (379)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~------~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l  262 (379)
                                         ...+||+|||+.+........+      .-...|.|||.+....++.++|||++||+||||
T Consensus       248 -------------------prtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEM  308 (1039)
T KOG0199|consen  248 -------------------PRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEM  308 (1039)
T ss_pred             -------------------cceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhh
Confidence                               4556666666665444333221      123479999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccc
Q 017021          263 CT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  341 (379)
Q Consensus       263 ~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (379)
                      ++ |..||.+.+...+++.+.+..                      .+.                          ..+.+
T Consensus       309 FtyGEePW~G~~g~qIL~~iD~~e----------------------rLp--------------------------RPk~c  340 (1039)
T KOG0199|consen  309 FTYGEEPWVGCRGIQILKNIDAGE----------------------RLP--------------------------RPKYC  340 (1039)
T ss_pred             hccCCCCCCCCCHHHHHHhccccc----------------------cCC--------------------------CCCCC
Confidence            98 899999988877776655211                      011                          11347


Q ss_pred             hhHHHHHHhhccccCCCCCcCHHHHh
Q 017021          342 AGDLTHLLQGLLRYDPTDRLTAREAL  367 (379)
Q Consensus       342 ~~~~~~li~~~L~~dP~~Rpta~e~l  367 (379)
                      +.++.+++..||..+|++|||+..+.
T Consensus       341 sedIY~imk~cWah~paDRptFsair  366 (1039)
T KOG0199|consen  341 SEDIYQIMKNCWAHNPADRPTFSAIR  366 (1039)
T ss_pred             hHHHHHHHHHhccCCccccccHHHHH
Confidence            88999999999999999999998875

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-34  Score=266.57  Aligned_cols=259  Identities=23%  Similarity=0.315  Sum_probs=208.1

Q ss_pred             eeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeec--cchhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           36 TYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        36 ~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      ....|.+..-.++++||+|-||.|.++.- +.+.+||+|+++.  ....+..+.+|+.+|.++     .||||+.+.+.+
T Consensus       531 al~EfPRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqL-----khPNIveLvGVC  604 (807)
T KOG1094|consen  531 ALVEFPRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRL-----KHPNIVELLGVC  604 (807)
T ss_pred             chhhcchhheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhcc-----CCCCeeEEEeee
Confidence            34566777778899999999999999984 4479999999974  344568899999999999     779999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      ..++-+++++||+ .|+|.+++.++.-..+.-....+++.||+.|++||.+.+++|||+.++|+|+              
T Consensus       605 ~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv--------------  670 (807)
T KOG1094|consen  605 VQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV--------------  670 (807)
T ss_pred             ecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee--------------
Confidence            9999999999999 9999999998743344556777899999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCCCc-----ccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh--C
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY-----IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT--G  265 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~--g  265 (379)
                                   +++..+||+|||+++........     .+-...|+|||.+...+++.+||+|+||+++||+++  .
T Consensus       671 -------------~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~  737 (807)
T KOG1094|consen  671 -------------DGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCR  737 (807)
T ss_pred             -------------cCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHh
Confidence                         78888999999998744333322     233579999999999999999999999999999875  7


Q ss_pred             CCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          266 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       266 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                      ..||....+..........+...+..                               ..+.          .+.-++..+
T Consensus       738 e~Py~~lt~e~vven~~~~~~~~~~~-------------------------------~~l~----------~P~~cp~~l  776 (807)
T KOG1094|consen  738 EQPYSQLTDEQVVENAGEFFRDQGRQ-------------------------------VVLS----------RPPACPQGL  776 (807)
T ss_pred             hCchhhhhHHHHHHhhhhhcCCCCcc-------------------------------eecc----------CCCcCcHHH
Confidence            89998766655544443333222111                               0011          122466788


Q ss_pred             HHHHhhccccCCCCCcCHHHHhc
Q 017021          346 THLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      .++|..||..|-.+|||.+++..
T Consensus       777 yelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  777 YELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             HHHHHHHhchhhhcCCCHHHHHH
Confidence            89999999999999999999853

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.1e-34  Score=260.26  Aligned_cols=261  Identities=22%  Similarity=0.251  Sum_probs=187.1

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc----
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN----  117 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~----  117 (379)
                      -...++.+.||+|.||.||+|.  .+++.||||++..  ...+.+..|.++.....   -.|+||+++++.-+-..    
T Consensus       209 l~pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~--~~kqs~~~Ek~Iy~lp~---m~h~nIl~Fi~~ekr~t~~~~  281 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPE--QEKQSFQNEKNIYSLPG---MKHENILQFIGAEKRGTADRM  281 (534)
T ss_pred             CCchhhHHHhhcCccceeehhh--ccCceeEEEecCH--HHHHHHHhHHHHHhccC---ccchhHHHhhchhccCCcccc
Confidence            3445678999999999999995  5569999999973  34566677777776542   37899999998877544    


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---------cCCcccCCCCCcEEEecccccccC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD---------LCMIHTDLKPENVLLVSSEYIKVP  187 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---------~~iiH~dlkp~Nili~~~~~~~~~  187 (379)
                      .++||++|. .|+|.+++..+.   .++....+++..++.||+|||+         ..|+|||||..|||++        
T Consensus       282 eywLVt~fh~kGsL~dyL~~nt---isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK--------  350 (534)
T KOG3653|consen  282 EYWLVTEFHPKGSLCDYLKANT---ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVK--------  350 (534)
T ss_pred             ceeEEeeeccCCcHHHHHHhcc---ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEc--------
Confidence            799999999 999999999874   9999999999999999999995         3599999999999994        


Q ss_pred             CCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCC-C----C-CccchHhHH
Q 017021          188 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLG-W----T-YPCDIWSVG  256 (379)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~-~----~-~~sDvwSlG  256 (379)
                                         .+....|+|||+|.+..+..     ...+||.+|||||++.+.. +    . .+.||||+|
T Consensus       351 -------------------~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamg  411 (534)
T KOG3653|consen  351 -------------------NDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMG  411 (534)
T ss_pred             -------------------cCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHH
Confidence                               55566777777776544432     2368999999999997632 1    1 467999999


Q ss_pred             HHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHH
Q 017021          257 CILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ  336 (379)
Q Consensus       257 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (379)
                      .++||++++-.-++.....+..--.+...|.-|                           +.+.++.++-..+.+..+..
T Consensus       412 LVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hP---------------------------t~e~mq~~VV~kK~RP~~p~  464 (534)
T KOG3653|consen  412 LVLWEIASRCTDADPGPVPEYQLPFEAEVGNHP---------------------------TLEEMQELVVRKKQRPKIPD  464 (534)
T ss_pred             HHHHHHHhhcccccCCCCCcccCchhHHhcCCC---------------------------CHHHHHHHHHhhccCCCChh
Confidence            999999997655532111111111122223222                           22223332222222222222


Q ss_pred             hhc--cchhHHHHHHhhccccCCCCCcCHHHH
Q 017021          337 HVD--HSAGDLTHLLQGLLRYDPTDRLTAREA  366 (379)
Q Consensus       337 ~~~--~~~~~~~~li~~~L~~dP~~Rpta~e~  366 (379)
                      .|.  ....-+++.+..||+.||+.|.||.-+
T Consensus       465 ~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv  496 (534)
T KOG3653|consen  465 AWRKHAGMAVLCETIEECWDHDAEARLTAGCV  496 (534)
T ss_pred             hhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence            222  234568999999999999999998644

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=1e-32  Score=293.07  Aligned_cols=185  Identities=19%  Similarity=0.267  Sum_probs=151.1

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      ++..+.||+|+||.||+|+++.++..||+|+++.....   ...|+..+.++     .|+||+++++++.+++..|+|||
T Consensus       692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~l~~l-----~HpnIv~~~~~~~~~~~~~lv~E  763 (968)
T PLN00113        692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI---PSSEIADMGKL-----QHPNIVKLIGLCRSEKGAYLIHE  763 (968)
T ss_pred             CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc---cHHHHHHHhhC-----CCCCcceEEEEEEcCCCCEEEEe
Confidence            45567899999999999999999999999998643221   22356667766     78999999999999999999999


Q ss_pred             CC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          125 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH---DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       125 ~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      |+ +++|.+++..     +++.....++.|++.||+|||   +.+++|||+||+||+++..                   
T Consensus       764 y~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~-------------------  819 (968)
T PLN00113        764 YIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGK-------------------  819 (968)
T ss_pred             CCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCC-------------------
Confidence            99 9999999953     788999999999999999999   6699999999999999543                   


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                              ...++. ++........ ....||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       820 --------~~~~~~-~~~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~  880 (968)
T PLN00113        820 --------DEPHLR-LSLPGLLCTD-TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADA  880 (968)
T ss_pred             --------CceEEE-eccccccccC-CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence                    333332 3333222111 223678999999999988899999999999999999999999853

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.98  E-value=5.2e-32  Score=223.20  Aligned_cols=201  Identities=23%  Similarity=0.434  Sum_probs=160.0

Q ss_pred             hhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           47 IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        47 i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      -...||+|++|.|=+.++..+|...|+|.+...  .+...+.+.|+.+..+-    ...|.++.+++..-....+++.||
T Consensus        50 ~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~----~~CPf~V~FyGa~~regdvwIcME  125 (282)
T KOG0984|consen   50 GIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRT----VDCPFTVHFYGALFREGDVWICME  125 (282)
T ss_pred             hhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccC----CCCCeEEEeehhhhccccEEEeHH
Confidence            457899999999999999999999999998732  23334444555554332    367999999999888899999999


Q ss_pred             CCCCCHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          125 KLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       125 ~~~~sL~~~l~~--~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      .+..||..+-..  ..+..+++..+-+++..+++||.|||+ ..++|||+||+|||+                       
T Consensus       126 ~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI-----------------------  182 (282)
T KOG0984|consen  126 LMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI-----------------------  182 (282)
T ss_pred             HhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE-----------------------
Confidence            999998877654  233478999999999999999999995 579999999999999                       


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC-Cc-ccccCCccchhhhhC----CCCCCccchHhHHHHHHHHHhCCCCCCCC-ch
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ-NY-IVSTRHYRAPEVILG----LGWTYPCDIWSVGCILVELCTGEALFQTH-EN  274 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~-~~-~~gt~~y~aPE~~~~----~~~~~~sDvwSlG~il~~l~~g~~pf~~~-~~  274 (379)
                          +..+.+|+||||.+......- .+ -.|...|+|||.+..    ..|+.+|||||||+++.||++++.||..- ++
T Consensus       183 ----n~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp  258 (282)
T KOG0984|consen  183 ----NYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP  258 (282)
T ss_pred             ----ccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCH
Confidence                566678888888776544332 12 368889999999853    36999999999999999999999999763 34


Q ss_pred             HHHH
Q 017021          275 LEHL  278 (379)
Q Consensus       275 ~~~~  278 (379)
                      .+++
T Consensus       259 F~qL  262 (282)
T KOG0984|consen  259 FQQL  262 (282)
T ss_pred             HHHH
Confidence            4433

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.98  E-value=1.3e-32  Score=256.56  Aligned_cols=199  Identities=27%  Similarity=0.443  Sum_probs=173.4

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhH---------HHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA---------MIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~---------~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      ....|...+++|.|+||.|++|.+++....|+||-+.+..-....+         -.|+++|.++..+  .|+||+++++
T Consensus       559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~--sH~NIlKlLd  636 (772)
T KOG1152|consen  559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKH--SHENILKLLD  636 (772)
T ss_pred             ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhc--Cccchhhhhh
Confidence            3345788899999999999999999999999999987542222222         2499999999664  5799999999


Q ss_pred             eeeecceEEEEEeCC--CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCC
Q 017021          112 WFDYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~--~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                      +|++++++||+||..  |.+|.+++..+.  .+++..+..++.|++.|+++||++||+|||||-+|+++           
T Consensus       637 fFEddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv-----------  703 (772)
T KOG1152|consen  637 FFEDDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV-----------  703 (772)
T ss_pred             eeecCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhccccccccCceecccccccEEE-----------
Confidence            999999999999998  789999999886  79999999999999999999999999999999999999           


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccC-CCCCcccccCCccchhhhhCCCC-CCccchHhHHHHHHHHHhCCC
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER-PDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~~l~~g~~  267 (379)
                                      ++++.++|+|||.+.... .+-..+.||..|.|||++.+.+| +.+.|||+||+++|.++....
T Consensus       704 ----------------d~~g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyken  767 (772)
T KOG1152|consen  704 ----------------DSNGFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKEN  767 (772)
T ss_pred             ----------------ecCCeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccC
Confidence                            788899999999886433 33356789999999999999887 588899999999999999999


Q ss_pred             CCC
Q 017021          268 LFQ  270 (379)
Q Consensus       268 pf~  270 (379)
                      ||+
T Consensus       768 pyy  770 (772)
T KOG1152|consen  768 PYY  770 (772)
T ss_pred             CCc
Confidence            886

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2e-30  Score=259.58  Aligned_cols=252  Identities=25%  Similarity=0.384  Sum_probs=198.6

Q ss_pred             eeeechhhhhhhhccccccceeEEEEEec----C---CCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeE
Q 017021           37 YIVFSAFADKIHSKMGEGTFGQVLECWDR----E---RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCV  107 (379)
Q Consensus        37 ~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~----~---~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~  107 (379)
                      ...+....-++.+.||+|+||.|++|.-.    .   ....||+|..+..  ......+..|+.++..+.    .|+|++
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g----~H~niv  365 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELG----KHPNIV  365 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhc----CCcchh
Confidence            34555555577789999999999999743    1   1456999998742  345677788999998883    578999


Q ss_pred             EecceeeecceEEEEEeCC-CCCHHHHHHhCC------------C--CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Q 017021          108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNN------------Y--RSFPIDLVREIARQLLECIAFMHDLCMIHTDLK  172 (379)
Q Consensus       108 ~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~------------~--~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlk  172 (379)
                      .+.+.+...+.+++|+||+ .|+|.+++....            .  ..++......++.||+.|++||++.+++||||-
T Consensus       366 ~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLA  445 (609)
T KOG0200|consen  366 NLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLA  445 (609)
T ss_pred             hheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhh
Confidence            9999999999999999999 999999998754            0  138899999999999999999999999999999


Q ss_pred             CCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcc----cc--cCCccchhhhhCCCC
Q 017021          173 PENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI----VS--TRHYRAPEVILGLGW  246 (379)
Q Consensus       173 p~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~----~g--t~~y~aPE~~~~~~~  246 (379)
                      .+|||+                           ..+..+||+|||+|+.........    .|  ...|+|||.+....|
T Consensus       446 aRNVLi---------------------------~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~f  498 (609)
T KOG0200|consen  446 ARNVLI---------------------------TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVF  498 (609)
T ss_pred             hhhEEe---------------------------cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcc
Confidence            999999                           667788999999988544443221    11  235999999999999


Q ss_pred             CCccchHhHHHHHHHHHh-CCCCCCCCc-hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhh
Q 017021          247 TYPCDIWSVGCILVELCT-GEALFQTHE-NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSV  324 (379)
Q Consensus       247 ~~~sDvwSlG~il~~l~~-g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (379)
                      +.+|||||+|+++||+++ |..||.+.. ..+....+.+.                      .++..|            
T Consensus       499 t~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G----------------------~r~~~P------------  544 (609)
T KOG0200|consen  499 TSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEG----------------------NRMEQP------------  544 (609)
T ss_pred             cccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcC----------------------CCCCCC------------
Confidence            999999999999999998 899997633 22222211111                      112222            


Q ss_pred             ccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHh
Q 017021          325 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL  367 (379)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l  367 (379)
                                    ..++.++.++++.||+.+|++||+..|+.
T Consensus       545 --------------~~c~~eiY~iM~~CW~~~p~~RP~F~~~~  573 (609)
T KOG0200|consen  545 --------------EHCSDEIYDLMKSCWNADPEDRPTFSECV  573 (609)
T ss_pred             --------------CCCCHHHHHHHHHHhCCCcccCCCHHHHH
Confidence                          35678899999999999999999999886

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-32  Score=260.98  Aligned_cols=261  Identities=25%  Similarity=0.392  Sum_probs=203.3

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchh-hHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      +...|.++.++|+|.||.||+|+|+.++++.|+|+++..... .....+|+-++..     +.|+||+.+++.+-.....
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~d-----c~h~nivay~gsylr~dkl   87 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRD-----CRHPNIVAYFGSYLRRDKL   87 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeec-----CCCcChHHHHhhhhhhcCc
Confidence            345688889999999999999999999999999999854322 2233345444433     4889999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |++|||| ||+|.++-.-.+  ++++.++...+.+.++||+|||++|=+|||||-.||++                    
T Consensus        88 wicMEycgggslQdiy~~Tg--plselqiayvcRetl~gl~ylhs~gk~hRdiKGanill--------------------  145 (829)
T KOG0576|consen   88 WICMEYCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILL--------------------  145 (829)
T ss_pred             EEEEEecCCCcccceeeecc--cchhHHHHHHHhhhhccchhhhcCCcccccccccceee--------------------
Confidence            9999999 889998876655  79999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhh---CCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                             ...+.++++|||.+......   ...+.||+.|+|||+..   ...|...+|+|++|++..|+..-++|.-..
T Consensus       146 -------td~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl  218 (829)
T KOG0576|consen  146 -------TDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL  218 (829)
T ss_pred             -------cccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc
Confidence                   56677888888877654433   34568999999999863   446889999999999999998877775332


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      .........-+ -++-|..                                      +     +-...+++.+.+|++.+
T Consensus       219 hpmr~l~LmTk-S~~qpp~--------------------------------------l-----kDk~kws~~fh~fvK~a  254 (829)
T KOG0576|consen  219 HPMRALFLMTK-SGFQPPT--------------------------------------L-----KDKTKWSEFFHNFVKGA  254 (829)
T ss_pred             chHHHHHHhhc-cCCCCCc--------------------------------------c-----cCCccchHHHHHHHHHH
Confidence            22221111111 1111110                                      0     01135788999999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCCCCcCC
Q 017021          353 LRYDPTDRLTAREALRHPFFTRDHLRR  379 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~~~~~~  379 (379)
                      |..||.+||||+-+|.|||+....-||
T Consensus       255 ltknpKkRptaeklL~h~fvs~~l~~r  281 (829)
T KOG0576|consen  255 LTKNPKKRPTAEKLLQHPFVSQTLSRR  281 (829)
T ss_pred             hcCCCccCCChhhheeceeeccchhhH
Confidence            999999999999999999998775543

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.97  E-value=8.7e-32  Score=279.19  Aligned_cols=200  Identities=19%  Similarity=0.227  Sum_probs=154.0

Q ss_pred             ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          117 NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       117 ~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..++.++|+++++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||+...+.+|+.|||++....
T Consensus        53 ~~~~~~~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~  131 (793)
T PLN00181         53 DSIVRALECEDVSLRQWLDNPD-RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG  131 (793)
T ss_pred             chhhhhhccCCccHHHHHhccc-ccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCccc
Confidence            4578889999999999997643 468999999999999999999999999999999999999999999999999875432


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCC-------------------CCcccccCCccchhhhhCCCCCCccchHhHHH
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPD-------------------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC  257 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-------------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~  257 (379)
                      .        +.+..++++|||.++.....                   .....||+.|+|||++.+..++.++|||||||
T Consensus       132 ~--------~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGv  203 (793)
T PLN00181        132 S--------DEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGV  203 (793)
T ss_pred             c--------cccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHH
Confidence            2        34567999999998642210                   01135788999999999989999999999999


Q ss_pred             HHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHh
Q 017021          258 ILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH  337 (379)
Q Consensus       258 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (379)
                      ++|||++|..|+....  .....+...  ..|...                                             
T Consensus       204 iL~ELl~~~~~~~~~~--~~~~~~~~~--~~~~~~---------------------------------------------  234 (793)
T PLN00181        204 LLFELFCPVSSREEKS--RTMSSLRHR--VLPPQI---------------------------------------------  234 (793)
T ss_pred             HHHHHhhCCCchhhHH--HHHHHHHHh--hcChhh---------------------------------------------
Confidence            9999999888764311  111111110  001000                                             


Q ss_pred             hccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       338 ~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                       ........+++.+||+.||.+||++.|+++||||.+.
T Consensus       235 -~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        235 -LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             -hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence             0012345678899999999999999999999999763

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=5.9e-31  Score=254.01  Aligned_cols=254  Identities=21%  Similarity=0.246  Sum_probs=205.3

Q ss_pred             eeeeeeeechhhhhhhhccccccceeEEEEEecCCC----ceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCee
Q 017021           33 NLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERK----EMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC  106 (379)
Q Consensus        33 ~~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~----~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i  106 (379)
                      |...+..+..-.-+..++||+|+||+||+|.+.-.|    -+||+|++...  .+...+++.|.-++..+     +|+|+
T Consensus       686 n~~~lrI~kEtelkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masl-----dHpnl  760 (1177)
T KOG1025|consen  686 NLALLRILKETELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASL-----DHPNL  760 (1177)
T ss_pred             hhhheeechhhhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcC-----CCchH
Confidence            567777777888888899999999999999775444    56899998643  33467788899888888     88999


Q ss_pred             EEecceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccc
Q 017021          107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK  185 (379)
Q Consensus       107 ~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~  185 (379)
                      +++++++.... +-||++|+ .|+|.++++.+. ..+.....+.|..||++|+.|||.++++||||-.+|||+       
T Consensus       761 ~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLV-------  831 (1177)
T KOG1025|consen  761 LRLLGVCMLST-LQLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLV-------  831 (1177)
T ss_pred             HHHhhhcccch-HHHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheee-------
Confidence            99999987665 88999999 999999998865 468889999999999999999999999999999999999       


Q ss_pred             cCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcc-----cccCCccchhhhhCCCCCCccchHhHHHHHH
Q 017021          186 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI-----VSTRHYRAPEVILGLGWTYPCDIWSVGCILV  260 (379)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~-----~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~  260 (379)
                                          .+...+|++|||+++...+.....     .-.+.|+|-|.+....|+.++||||+||++|
T Consensus       832 --------------------ksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiW  891 (1177)
T KOG1025|consen  832 --------------------KSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIW  891 (1177)
T ss_pred             --------------------cCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHH
Confidence                                566778888888887655554221     1235799999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhc
Q 017021          261 ELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD  339 (379)
Q Consensus       261 ~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (379)
                      |++| |..|+.+....++-..++...                      +++.                          ++
T Consensus       892 ElmTFGa~Py~gi~~~eI~dlle~ge----------------------RLsq--------------------------Pp  923 (1177)
T KOG1025|consen  892 ELMTFGAKPYDGIPAEEIPDLLEKGE----------------------RLSQ--------------------------PP  923 (1177)
T ss_pred             HHHhcCCCccCCCCHHHhhHHHhccc----------------------cCCC--------------------------CC
Confidence            9999 999998876655443332211                      1111                          12


Q ss_pred             cchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          340 HSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       340 ~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      .++-++.-++.+||..|++.||+++++.+
T Consensus       924 iCtiDVy~~mvkCwmid~~~rp~fkel~~  952 (1177)
T KOG1025|consen  924 ICTIDVYMVMVKCWMIDADSRPTFKELAE  952 (1177)
T ss_pred             CccHHHHHHHHHHhccCcccCccHHHHHH
Confidence            46677888999999999999999998753

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.97  E-value=8.6e-29  Score=214.96  Aligned_cols=208  Identities=39%  Similarity=0.618  Sum_probs=177.4

Q ss_pred             cccccceeEEEEEecCCCceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-C
Q 017021           51 MGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-G  127 (379)
Q Consensus        51 Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~  127 (379)
                      ||+|++|.||++.+..+++.+++|++.....  ....+.+|+..+..+     .+++++.+++++......++++|++ +
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l-----~~~~i~~~~~~~~~~~~~~~~~e~~~~   75 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKL-----NHPNIVKLYGVFEDENHLYLVMEYCEG   75 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhc-----CCCCeeeEeeeeecCCeEEEEEecCCC
Confidence            6899999999999988899999999985433  246777888888888     5588999999999989999999999 6


Q ss_pred             CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCC
Q 017021          128 SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK  207 (379)
Q Consensus       128 ~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (379)
                      ++|.+++.... ..++...+..++.+++.+|.+||+.|++|+|++|.||++..                          .
T Consensus        76 ~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~--------------------------~  128 (215)
T cd00180          76 GSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDS--------------------------D  128 (215)
T ss_pred             CcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeC--------------------------C
Confidence            99999998752 25889999999999999999999999999999999999943                          1


Q ss_pred             CCCeEEeecCcccccCCC---CCcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHH
Q 017021          208 SSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER  283 (379)
Q Consensus       208 ~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~  283 (379)
                      ...++|+|||.+......   .....+...|.+||..... .++.++|+|++|++++++                     
T Consensus       129 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------  187 (215)
T cd00180         129 NGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------  187 (215)
T ss_pred             CCcEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------
Confidence            567888888877654443   2334577889999999876 788999999999999998                     


Q ss_pred             HcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCH
Q 017021          284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  363 (379)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta  363 (379)
                                                                                 ..+.+++.+||+.||++||++
T Consensus       188 -----------------------------------------------------------~~~~~~l~~~l~~~p~~R~~~  208 (215)
T cd00180         188 -----------------------------------------------------------PELKDLIRKMLQKDPEKRPSA  208 (215)
T ss_pred             -----------------------------------------------------------HHHHHHHHHHhhCCcccCcCH
Confidence                                                                       046679999999999999999


Q ss_pred             HHHhcCC
Q 017021          364 REALRHP  370 (379)
Q Consensus       364 ~e~l~hp  370 (379)
                      +++++|+
T Consensus       209 ~~l~~~~  215 (215)
T cd00180         209 KEILEHL  215 (215)
T ss_pred             HHHhhCC
Confidence            9999885

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.96  E-value=3.5e-30  Score=220.51  Aligned_cols=198  Identities=25%  Similarity=0.335  Sum_probs=163.4

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEE-ecceeeecceEEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ-IRNWFDYRNHICI  121 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~-~~~~~~~~~~~~l  121 (379)
                      -.|.|.+.||+|.||.+-+++++.++..+|+|.+.........+.+|...-..+    ..|.||+. +...|++.+..++
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~L----s~H~hIi~tY~vaFqt~d~YvF   99 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFL----SPHQHIIDTYEVAFQTSDAYVF   99 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceee----ccchhhhHHHHHHhhcCceEEE
Confidence            468899999999999999999999999999999987666667777777665555    34445544 4557888899999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      ++||+ .|+|.+-+...+   +.+.....++.|+++|+.|+|+.+++|||||.+|||+..                    
T Consensus       100 ~qE~aP~gdL~snv~~~G---igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~--------------------  156 (378)
T KOG1345|consen  100 VQEFAPRGDLRSNVEAAG---IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFD--------------------  156 (378)
T ss_pred             eeccCccchhhhhcCccc---ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEec--------------------
Confidence            99999 899998887755   889999999999999999999999999999999999954                    


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCC---C--CCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL---G--WTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~---~--~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                           .....+||||||.++..+..-...-.+..|.+||.....   .  ..+.+|+|.||+++|.+++|..||+..
T Consensus       157 -----~df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka  228 (378)
T KOG1345|consen  157 -----ADFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKA  228 (378)
T ss_pred             -----CCccEEEeeecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhh
Confidence                 334589999999998766554444456678899986432   2  457889999999999999999999853

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.96  E-value=1.4e-27  Score=210.42  Aligned_cols=194  Identities=36%  Similarity=0.594  Sum_probs=164.6

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      |.+.+.||.|++|.||++.+..+++.+|+|.+.....  ....+..|+..+..+     .+++++++++++......+++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~-----~~~~i~~~~~~~~~~~~~~~v   75 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKL-----KHPNIVKLYGVFEDPEPLYLV   75 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhC-----CCCChhhheeeeecCCceEEE
Confidence            5667899999999999999998899999999975432  356667788888777     668899999999988999999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      +|++ +++|.+++..... .+++..+..++.+++.+|.+||+.+++|+|++|.||++                       
T Consensus        76 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v-----------------------  131 (225)
T smart00221       76 MEYCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILL-----------------------  131 (225)
T ss_pred             EeccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE-----------------------
Confidence            9999 6799999987641 17899999999999999999999999999999999999                       


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhh-hCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVI-LGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~-~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                          +....++|+|||.+.......    ....++..|++||.. ....++.++|+|+||+++++|++|+.||..
T Consensus       132 ----~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      132 ----GMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ----cCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence                444677888888776544332    445678889999998 666788899999999999999999999976

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.95  E-value=2.2e-27  Score=201.83  Aligned_cols=168  Identities=23%  Similarity=0.275  Sum_probs=122.7

Q ss_pred             CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCC
Q 017021          128 SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK  207 (379)
Q Consensus       128 ~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (379)
                      |+|.+++...+ ..+++..++.++.|++.||.|||+.+      ||+||+++                           .
T Consensus         1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~---------------------------~   46 (176)
T smart00750        1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLT---------------------------W   46 (176)
T ss_pred             CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEc---------------------------C
Confidence            68999998643 36999999999999999999999998      99999994                           4


Q ss_pred             CCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH-HHHHHHHHcC
Q 017021          208 SSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE-HLAMMERVLG  286 (379)
Q Consensus       208 ~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~  286 (379)
                      ++.+++  ||.+.......  ..||+.|+|||++.+..++.++|||||||++|+|++|+.||....... ....+.....
T Consensus        47 ~~~~~~--fG~~~~~~~~~--~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~  122 (176)
T smart00750       47 DGLLKL--DGSVAFKTPEQ--SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMP  122 (176)
T ss_pred             ccceee--ccceEeecccc--CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhc
Confidence            445555  66665433322  258899999999999999999999999999999999999996543211 1111111111


Q ss_pred             CCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccch--hHHHHHHhhccccCCCCCcCHH
Q 017021          287 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA--GDLTHLLQGLLRYDPTDRLTAR  364 (379)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~li~~~L~~dP~~Rpta~  364 (379)
                      +...                      ..            .+.        ....+  ..+.++|.+||+.||.+|||+.
T Consensus       123 ~~~~----------------------~~------------~~~--------~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~  160 (176)
T smart00750      123 ADDP----------------------RD------------RSN--------LESVSAARSFADFMRVCASRLPQRREAAN  160 (176)
T ss_pred             cCCc----------------------cc------------ccc--------HHHHHhhhhHHHHHHHHHhcccccccCHH
Confidence            0000                      00            000        00122  3689999999999999999999


Q ss_pred             HHhcCCCCCCC
Q 017021          365 EALRHPFFTRD  375 (379)
Q Consensus       365 e~l~hp~f~~~  375 (379)
                      |+++|+|+...
T Consensus       161 ~ll~~~~~~~~  171 (176)
T smart00750      161 HYLAHCRALFA  171 (176)
T ss_pred             HHHHHHHHHHH
Confidence            99999987643

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.94  E-value=1.1e-26  Score=208.26  Aligned_cols=248  Identities=17%  Similarity=0.203  Sum_probs=182.0

Q ss_pred             chhhhhhhhccccccceeEEEEEecCC-----CceEEEEEeeccchh--hHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRER-----KEMVAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~-----~~~vAiK~~~~~~~~--~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      ..-++++...+-+|.||.||.|.+++.     .+.|-+|.++.....  ...+..|--.+.-     -.|+|+..+.+..
T Consensus       282 ~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~-----~sH~nll~V~~V~  356 (563)
T KOG1024|consen  282 QRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYG-----ASHPNLLSVLGVS  356 (563)
T ss_pred             hhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhc-----CcCCCccceeEEE
Confidence            344466778889999999999966543     345677777643322  1222223222222     2688888887765


Q ss_pred             e-ecceEEEEEeCC-CCCHHHHHHh------CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccc
Q 017021          114 D-YRNHICIVFEKL-GSSLYDFLRK------NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK  185 (379)
Q Consensus       114 ~-~~~~~~lv~e~~-~~sL~~~l~~------~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~  185 (379)
                      . +....++++.+. -++|..++..      .+-+.++-.+...++.|++.|++|||+.|++|.||-.+|++|+      
T Consensus       357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvId------  430 (563)
T KOG1024|consen  357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVID------  430 (563)
T ss_pred             eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceeh------
Confidence            4 456788999999 7899999982      2223467788999999999999999999999999999999994      


Q ss_pred             cCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccc-----cCCccchhhhhCCCCCCccchHhHHHHHH
Q 017021          186 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVS-----TRHYRAPEVILGLGWTYPCDIWSVGCILV  260 (379)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~g-----t~~y~aPE~~~~~~~~~~sDvwSlG~il~  260 (379)
                                           ....+||+|-.+++..-+..-...|     ...|++||.+.+..|+.++|+||||+++|
T Consensus       431 ---------------------d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllW  489 (563)
T KOG1024|consen  431 ---------------------DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLW  489 (563)
T ss_pred             ---------------------hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHH
Confidence                                 4466777777666543333222222     45799999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhc
Q 017021          261 ELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD  339 (379)
Q Consensus       261 ~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (379)
                      ||+| |+.|+..-++.|....+....                      ++..                          +-
T Consensus       490 ELmtlg~~PyaeIDPfEm~~ylkdGy----------------------RlaQ--------------------------P~  521 (563)
T KOG1024|consen  490 ELMTLGKLPYAEIDPFEMEHYLKDGY----------------------RLAQ--------------------------PF  521 (563)
T ss_pred             HHHhcCCCCccccCHHHHHHHHhccc----------------------eecC--------------------------CC
Confidence            9998 999998877776554443321                      0111                          12


Q ss_pred             cchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          340 HSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       340 ~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      .+++++..++-.||..+|++||+.+|+..
T Consensus       522 NCPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  522 NCPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             CCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            47789999999999999999999999863

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.94  E-value=2.7e-25  Score=207.12  Aligned_cols=208  Identities=28%  Similarity=0.351  Sum_probs=169.0

Q ss_pred             hhhhhhccccccceeEEEEEecCCC-ceEEEEEeeccch-hhHhHHHHHHHHHHHHhcCCCCCeeEEeccee-eecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF-DYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~-~~vAiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~-~~~~~~~  120 (379)
                      .|++.++||+|+||.||.|.+..++ ..+|+|....... .......|..++..+.. .....+++.+++.. ..+.+.|
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~-~~~~~~~~~~~~~G~~~~~~~~   97 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEK-KNGPSHFPKLLDHGRSTEDFNF   97 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhh-hcCCCCCCEEEEeccCCCceeE
Confidence            7999999999999999999988774 6789998875322 12256678999888865 22335677777777 5788999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +||+.+|.||.++........++...+..++.|++.+|++||+.|++||||||+|+++....                  
T Consensus        98 iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~------------------  159 (322)
T KOG1164|consen   98 IVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSS------------------  159 (322)
T ss_pred             EEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCC------------------
Confidence            99999999999998776656899999999999999999999999999999999999995421                  


Q ss_pred             ccccCCCCCCeEEeecCccc--cc----C----CC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCC
Q 017021          201 YFKRMPKSSAIKVIDFGSTT--YE----R----PD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~--~~----~----~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                          ......+.|+|||+++  ..    +    +.   .....||..|+++....+...+.+.|+||++.++.++..|..
T Consensus       160 ----~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~L  235 (322)
T KOG1164|consen  160 ----RSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSL  235 (322)
T ss_pred             ----CcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCC
Confidence                0122568999999987  31    1    11   123459999999999999999999999999999999999999


Q ss_pred             CCCCCch
Q 017021          268 LFQTHEN  274 (379)
Q Consensus       268 pf~~~~~  274 (379)
                      ||.....
T Consensus       236 PW~~~~~  242 (322)
T KOG1164|consen  236 PWEALEM  242 (322)
T ss_pred             CCccccc
Confidence            9976553

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.93  E-value=8.1e-26  Score=190.83  Aligned_cols=210  Identities=27%  Similarity=0.350  Sum_probs=171.3

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .+-.|+++++||+|+||.+|+|.....|+.||||.-++..... ....|..+...+.    +...++.+..+..+..+-.
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hp-qL~yEskvY~iL~----~g~GiP~i~~y~~e~~ynv   87 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHP-QLLYESKVYRILQ----GGVGIPHIRHYGTEKDYNV   87 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCc-chhHHHHHHHHhc----cCCCCchhhhhccccccce
Confidence            3446899999999999999999999999999999987544433 3445777777663    3355777888888889999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +||++.|.||.+++.-.. +.++...++-++-|++.-++|+|.++++||||||+|+|+.-.                   
T Consensus        88 lVMdLLGPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlg-------------------  147 (341)
T KOG1163|consen   88 LVMDLLGPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLG-------------------  147 (341)
T ss_pred             eeeeccCccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccc-------------------
Confidence            999999999999987543 469999999999999999999999999999999999999532                   


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC----------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ----------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                           --...+.|+|||+|+..-...          ....||..|.+-....+...+...|+=|+|.++...-.|..||+
T Consensus       148 -----rh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQ  222 (341)
T KOG1163|consen  148 -----RHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQ  222 (341)
T ss_pred             -----cccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccc
Confidence                 234568999999987533322          34579999999988888888899999999999999999999999


Q ss_pred             CCchHHHHHH
Q 017021          271 THENLEHLAM  280 (379)
Q Consensus       271 ~~~~~~~~~~  280 (379)
                      +-......+.
T Consensus       223 glka~tk~QK  232 (341)
T KOG1163|consen  223 GLKAATKKQK  232 (341)
T ss_pred             ccchhhHHHH
Confidence            8655444433

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.93  E-value=2.5e-25  Score=195.93  Aligned_cols=212  Identities=24%  Similarity=0.311  Sum_probs=178.6

Q ss_pred             eeeeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           34 LITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        34 ~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      .-..+...+..|+|.++||+|+||.++.|++-.++++||||.-.. ....-....|-.....+.    +.+.|+..+.+-
T Consensus        19 s~s~~~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-kS~APQLrdEYr~YKlL~----g~~GIP~vYYFG   93 (449)
T KOG1165|consen   19 SSSGVLMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-KSEAPQLRDEYRTYKLLG----GTEGIPQVYYFG   93 (449)
T ss_pred             CCCCceEecccceeccccccCcceeeecccccccCceEEEEeccc-cCCcchHHHHHHHHHHHc----CCCCCCceeeec
Confidence            334456778899999999999999999999999999999998653 222344555777777774    446688888888


Q ss_pred             eecceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          114 DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       114 ~~~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      .++.+-.+|+|+.|.||.|+++-.+ +.++...+.-++.|++.-++++|++.+|.|||||+|+||...+.          
T Consensus        94 qeG~~NiLVidLLGPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~----------  162 (449)
T KOG1165|consen   94 QEGKYNILVIDLLGPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGT----------  162 (449)
T ss_pred             cccchhhhhhhhhCcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCC----------
Confidence            8888999999999999999998866 57999999999999999999999999999999999999976542          


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC----------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHH
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC  263 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~  263 (379)
                                  .....+.++|||+|+....+.          .+..||..||+-....+...+.+.|+=|||.+++..+
T Consensus       163 ------------k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFL  230 (449)
T KOG1165|consen  163 ------------KDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFL  230 (449)
T ss_pred             ------------CCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhc
Confidence                        455779999999997543332          3357999999999999999999999999999999999


Q ss_pred             hCCCCCCCCc
Q 017021          264 TGEALFQTHE  273 (379)
Q Consensus       264 ~g~~pf~~~~  273 (379)
                      .|..||++-.
T Consensus       231 RGsLPWQGLK  240 (449)
T KOG1165|consen  231 RGSLPWQGLK  240 (449)
T ss_pred             cCCCcccccc
Confidence            9999998743

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=7.4e-26  Score=224.24  Aligned_cols=257  Identities=21%  Similarity=0.272  Sum_probs=179.2

Q ss_pred             hhhhccccccceeEEEEEecCCCceEEEEEee----ccchhhHh---HHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           46 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREA---AMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        46 ~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~----~~~~~~~~---~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      +-...+|.|++|.|+.+......+.++.|.+.    ........   ...|.-+-..     ..|++++.....+.+...
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~-----l~h~~~~e~l~~~~~~~~  395 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSS-----LSHPNIIETLDIVQEIDG  395 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeeccc-----ccCCchhhhHHHHhhccc
Confidence            34578999999988888877666666666543    11111111   1112222222     266777666666555544


Q ss_pred             EEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          119 ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       119 ~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      ..-.||||.++|..++...+  .++...+..++.|++.||+|+|+.|+.|||+||+|+++                    
T Consensus       396 ~~~~mE~~~~Dlf~~~~~~~--~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~--------------------  453 (601)
T KOG0590|consen  396 ILQSMEYCPYDLFSLVMSNG--KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLV--------------------  453 (601)
T ss_pred             chhhhhcccHHHHHHHhccc--ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEE--------------------
Confidence            44449999449999998763  58899999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC-------CcccccCCccchhhhhCCCCC-CccchHhHHHHHHHHHhCCCCCC
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGLGWT-YPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                             ..++.+||||||.+.......       ...+|+..|+|||.+.+..|+ ...||||.|+++..|.+|+.||.
T Consensus       454 -------~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk  526 (601)
T KOG0590|consen  454 -------TENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWK  526 (601)
T ss_pred             -------ecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccc
Confidence                   455567777777765433322       335789999999999999988 67899999999999999999998


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      .....+....                        .+....+...                .......+...+..-+.+|.
T Consensus       527 ~a~~~~~~~~------------------------~~~~~~~~~~----------------~~~~~~~~~~lp~~~~~~~~  566 (601)
T KOG0590|consen  527 VAKKSDNSFK------------------------TNNYSDQRNI----------------FEGPNRLLSLLPRETRIIIY  566 (601)
T ss_pred             cccccccchh------------------------hhcccccccc----------------ccChHHHHHhchhhHHHHHH
Confidence            6543222110                        0000000000                00001112234567788999


Q ss_pred             hccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          351 GLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +||++||.+|.|++++++.+||++..
T Consensus       567 ~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  567 RMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             HHccCChhheecHHHHhhChHhhhcc
Confidence            99999999999999999999998764

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.90  E-value=3.1e-22  Score=185.34  Aligned_cols=255  Identities=32%  Similarity=0.488  Sum_probs=190.8

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeeccch----hhHhHHHHHHHHHHHHhcCCCCC-eeEEecceeeecceE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHI  119 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~-~i~~~~~~~~~~~~~  119 (379)
                      |.+.+.||.|+||.||++.+.   ..+|+|.+.....    ....+.+|...+..+     .++ +++.+.+.+......
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~-----~~~~~i~~~~~~~~~~~~~   73 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASL-----NHPPNIVKLYDFFQDEGSL   73 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHc-----cCCcceeeEEEEEecCCEE
Confidence            677889999999999999987   7789999874322    355667777777777     434 699999999878888


Q ss_pred             EEEEeCC-CCCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNY-RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      +++++++ ++++.+++..... ..++......++.|++.++.++|+.|++|||+||+||++.                  
T Consensus        74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~------------------  135 (384)
T COG0515          74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLD------------------  135 (384)
T ss_pred             EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeec------------------
Confidence            9999999 8899877766431 1588999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCC-CeEEeecCcccccCCC---------CCcccccCCccchhhhhC---CCCCCccchHhHHHHHHHHHh
Q 017021          198 DSSYFKRMPKSS-AIKVIDFGSTTYERPD---------QNYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       198 ~~~~~~~~~~~~-~~~l~Dfg~~~~~~~~---------~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~il~~l~~  264 (379)
                               ... .++++|||.+......         .....||..|.+||.+.+   ..++...|+||+|++++++++
T Consensus       136 ---------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~  206 (384)
T COG0515         136 ---------RDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLT  206 (384)
T ss_pred             ---------CCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHh
Confidence                     334 5788888877533322         245679999999999987   567899999999999999999


Q ss_pred             CCCCCCCCch----HHHHHHHHHHcCC-CChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhc
Q 017021          265 GEALFQTHEN----LEHLAMMERVLGP-LPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD  339 (379)
Q Consensus       265 g~~pf~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (379)
                      |..||.....    ......+.....+ ....                   ...      ...                .
T Consensus       207 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~------~~~----------------~  245 (384)
T COG0515         207 GLPPFEGEKNSSATSQTLKIILELPTPSLASP-------------------LSP------SNP----------------E  245 (384)
T ss_pred             CCCCCCCCCccccHHHHHHHHHhcCCcccccc-------------------cCc------ccc----------------c
Confidence            9999876553    2222222111111 0000                   000      000                1


Q ss_pred             cchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       340 ~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      .....+.+++..|+..+|..|.++.+...+++....
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~  281 (384)
T COG0515         246 LISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL  281 (384)
T ss_pred             hhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence            123578899999999999999999998888766543

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.89  E-value=5e-23  Score=192.08  Aligned_cols=167  Identities=20%  Similarity=0.181  Sum_probs=120.8

Q ss_pred             hhhhhhhhccccccceeEEEEEecC-CCceEEEEEeecc------chhhHhHHHHHHHHHHHHhcCCCCCeeE-Eeccee
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRE-RKEMVAIKIVRGI------KKYREAAMIEIEVLQQLAKHDKGGNRCV-QIRNWF  113 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~-~~~~vAiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~i~-~~~~~~  113 (379)
                      .-.|++.+.||+|+||+||+|.++. +++.||+|++...      ......+.+|+.++..+     .|++++ .+++. 
T Consensus        17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L-----~h~~iv~~l~~~-   90 (365)
T PRK09188         17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV-----RGIGVVPQLLAT-   90 (365)
T ss_pred             cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc-----cCCCCCcEEEEc-
Confidence            3458899999999999999998876 6788899986522      22345678899999998     455554 34432 


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCC-CCCcEEEecccccccCCCcc
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDL-KPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dl-kp~Nili~~~~~~~~~~~~~  191 (379)
                         +..|+||||+ |++|.. +..     ..   ...++.+++.||.|||+.||+|||| ||+|||+             
T Consensus        91 ---~~~~LVmE~~~G~~L~~-~~~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv-------------  145 (365)
T PRK09188         91 ---GKDGLVRGWTEGVPLHL-ARP-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLM-------------  145 (365)
T ss_pred             ---CCcEEEEEccCCCCHHH-hCc-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEE-------------
Confidence               4579999999 888862 211     11   1457889999999999999999999 9999999             


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----------CcccccCCccchhhhhCCC------CCCccchH
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----------NYIVSTRHYRAPEVILGLG------WTYPCDIW  253 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~------~~~~sDvw  253 (379)
                                    +.++.++|+|||+|.......           ....+++.|.|||.+....      .+..+|-|
T Consensus       146 --------------~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        146 --------------GPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             --------------cCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence                          344567788888776443332           2245778899999885322      33446666

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=1.2e-22  Score=183.06  Aligned_cols=273  Identities=19%  Similarity=0.235  Sum_probs=183.3

Q ss_pred             HHHHhhcceeecceeeeeeeeeechhhhhhhhccccccceeEEEEEecCCCc----------------------------
Q 017021           18 LTMALRNRVLMCNMFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKE----------------------------   69 (379)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~----------------------------   69 (379)
                      +....++..+.+..-+... ..|....|+|.+.||+|....||.|..+..|.                            
T Consensus       133 ~~~~~ks~~whDei~~r~d-skFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~  211 (598)
T KOG4158|consen  133 YNEDLKSTEWHDEIPNRID-SKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVS  211 (598)
T ss_pred             HHHhhhccCCCCcCcchhh-cccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCccc
Confidence            3344555556554444333 55667779999999999999999887654211                            


Q ss_pred             -------eEEEEEeecc--chhhHhHH----HHHHHH-----------------HHHHhcCCCCCeeEEecceeee----
Q 017021           70 -------MVAIKIVRGI--KKYREAAM----IEIEVL-----------------QQLAKHDKGGNRCVQIRNWFDY----  115 (379)
Q Consensus        70 -------~vAiK~~~~~--~~~~~~~~----~e~~~l-----------------~~l~~~~~~~~~i~~~~~~~~~----  115 (379)
                             +.|||.+-+-  +.....+.    +|+-=.                 ..-..+...||||+++..+|.+    
T Consensus       212 ~p~~~aFPLAiKmMfN~~~~s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~  291 (598)
T KOG4158|consen  212 KPAQKAFPLAIKMMFNFEHDSGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKV  291 (598)
T ss_pred             CccccccchHHHHhcccccCCchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhcc
Confidence                   1344443210  11111111    111000                 0001122368999999998864    


Q ss_pred             -----------------------cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Q 017021          116 -----------------------RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLK  172 (379)
Q Consensus       116 -----------------------~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlk  172 (379)
                                             +...|+||..+..+|.+++..+.   .+......++.|+++|+.|||++|+.|||+|
T Consensus       292 lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~---~s~r~~~~~laQlLEav~hL~~hgvAhRDlK  368 (598)
T KOG4158|consen  292 LPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH---RSYRTGRVILAQLLEAVTHLHKHGVAHRDLK  368 (598)
T ss_pred             CCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC---CchHHHHHHHHHHHHHHHHHHHccchhhccc
Confidence                                   24689999999999999998865   6777888899999999999999999999999


Q ss_pred             CCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCC---------CCCcccccCCccchhhhhC
Q 017021          173 PENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---------DQNYIVSTRHYRAPEVILG  243 (379)
Q Consensus       173 p~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~---------~~~~~~gt~~y~aPE~~~~  243 (379)
                      .+||++--+.                       +.-..+.++|||.+.-...         ......|....+|||+...
T Consensus       369 SDNiL~Eldd-----------------------D~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta  425 (598)
T KOG4158|consen  369 SDNILLELDD-----------------------DEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA  425 (598)
T ss_pred             ccceEEEecC-----------------------CCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence            9999994321                       4556688889986642222         1122356778899999875


Q ss_pred             CC-----C-CCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCc
Q 017021          244 LG-----W-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAAS  317 (379)
Q Consensus       244 ~~-----~-~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (379)
                      .+     . -.++|.|+.|.+.||+++...||++.......                     .+.|.+.+.         
T Consensus       426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~---------------------~r~Yqe~qL---------  475 (598)
T KOG4158|consen  426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLD---------------------TRTYQESQL---------  475 (598)
T ss_pred             CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheec---------------------hhhhhhhhC---------
Confidence            43     2 26889999999999999999999874331110                     011111111         


Q ss_pred             hhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHH
Q 017021          318 RESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  364 (379)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~  364 (379)
                                       ..+.+.+++.+++++..+|+.||++|++++
T Consensus       476 -----------------Palp~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  476 -----------------PALPSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             -----------------CCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence                             122345778999999999999999999843

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.89  E-value=3.6e-24  Score=203.48  Aligned_cols=238  Identities=25%  Similarity=0.390  Sum_probs=187.4

Q ss_pred             ccccccceeEEEEEe---cCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEE
Q 017021           50 KMGEGTFGQVLECWD---RERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  123 (379)
Q Consensus        50 ~Lg~G~~g~V~~~~~---~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~  123 (379)
                      .+|+|+||.|++++-   ...|..+|+|..+...   ........|..++...    ..++.++.++..++.+...++++
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~----~~~~f~v~lhyafqt~~kl~l~l   76 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFV----HNTPFLVKLHYAFQTDGKLYLIL   76 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhc----cCCCceeeeeeeeccccchhHhh
Confidence            379999999998753   3447889999986321   1111333456666555    35788999999999999999999


Q ss_pred             eCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          124 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       124 e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      ++. |+.|...+....  .+.+.....+...++.+++++|+.|+++||+|++||++                        
T Consensus        77 d~~rgg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill------------------------  130 (612)
T KOG0603|consen   77 DFLRGGDLFTRLSKEV--MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL------------------------  130 (612)
T ss_pred             hhcccchhhhccccCC--chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee------------------------
Confidence            999 888877766654  57788888999999999999999999999999999999                        


Q ss_pred             ccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHH
Q 017021          203 KRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME  282 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~  282 (379)
                         +..+.+++.|||.++..-..... +||..|+|||++.  .....+|.||+|+++++|++|..||.+    +...+|.
T Consensus       131 ---d~~Ghi~~tdfglske~v~~~~~-cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il  200 (612)
T KOG0603|consen  131 ---LLEGHIKLTDFGLSKEAVKEKIA-CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRIL  200 (612)
T ss_pred             ---cccCccccCCchhhhHhHhhhhc-ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHh
Confidence               55666777777776643333322 8999999999998  567889999999999999999999987    5555555


Q ss_pred             HHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcC
Q 017021          283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  362 (379)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  362 (379)
                      +.....|.+                                                 .+..+++++..++..+|..|..
T Consensus       201 ~~~~~~p~~-------------------------------------------------l~~~a~~~~~~l~~r~p~nrLg  231 (612)
T KOG0603|consen  201 KAELEMPRE-------------------------------------------------LSAEARSLFRQLFKRNPENRLG  231 (612)
T ss_pred             hhccCCchh-------------------------------------------------hhHHHHHHHHHHHhhCHHHHhc
Confidence            544444443                                                 4567899999999999999995


Q ss_pred             -----HHHHhcCCCCCCCC
Q 017021          363 -----AREALRHPFFTRDH  376 (379)
Q Consensus       363 -----a~e~l~hp~f~~~~  376 (379)
                           +.|+++|+||+..+
T Consensus       232 ~~~~~~~eik~h~f~~~i~  250 (612)
T KOG0603|consen  232 AGPDGVDEIKQHEFFQSID  250 (612)
T ss_pred             cCcchhHHHhccchheeee
Confidence                 58999999998754

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.89  E-value=6.5e-23  Score=183.58  Aligned_cols=202  Identities=20%  Similarity=0.281  Sum_probs=125.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhh----HhHHHHHHHHHHHHhcCC-----CCCe------eEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDK-----GGNR------CVQ  108 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~----~~~~~e~~~l~~l~~~~~-----~~~~------i~~  108 (379)
                      +.+..+.||.|+++.||.+++.+||+.+|+|++.......    +.+.+|......+....+     .+-.      +++
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            3455689999999999999999999999999986332211    122222211111000000     0001      222


Q ss_pred             ecc---eeeec---c-----eEEEEEeCCCCCHHHHHHh---CCC--CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Q 017021          109 IRN---WFDYR---N-----HICIVFEKLGSSLYDFLRK---NNY--RSFPIDLVREIARQLLECIAFMHDLCMIHTDLK  172 (379)
Q Consensus       109 ~~~---~~~~~---~-----~~~lv~e~~~~sL~~~l~~---~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlk  172 (379)
                      +.+   +++..   .     ..+++|+-+.+||.+++..   ...  ..+.......+..|+++.+++||+.|++|+||+
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~  172 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK  172 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred             EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence            221   11111   1     3478899999999988653   111  123344556777899999999999999999999


Q ss_pred             CCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCC--------
Q 017021          173 PENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL--------  244 (379)
Q Consensus       173 p~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~--------  244 (379)
                      |+|+++                           +.++.+.|.||+.....+........+..|.+||.....        
T Consensus       173 ~~nfll---------------------------~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~  225 (288)
T PF14531_consen  173 PENFLL---------------------------DQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNA  225 (288)
T ss_dssp             GGGEEE----------------------------TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEE
T ss_pred             eeeEEE---------------------------cCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccc
Confidence            999999                           566777888887665544433222345678999977432        


Q ss_pred             CCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          245 GWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       245 ~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                      .++.+.|.|+||+++|.|+++..||...
T Consensus       226 ~~t~~~DaW~LG~~ly~lWC~~lPf~~~  253 (288)
T PF14531_consen  226 PYTFATDAWQLGITLYSLWCGRLPFGLS  253 (288)
T ss_dssp             EE-HHHHHHHHHHHHHHHHHSS-STCCC
T ss_pred             eeeeccCHHHHHHHHHHHHHccCCCCCC
Confidence            4788999999999999999999999754

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.89  E-value=1.8e-23  Score=208.40  Aligned_cols=248  Identities=24%  Similarity=0.339  Sum_probs=175.6

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeeccc-h-hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-K-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~-~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      +...+-||++.|=.|.+|++.+ | .|++|++-+.+ . .-..+.+++.-.+..   ...+||++.+......++..|+|
T Consensus        25 ~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik~~---l~~~pn~lPfqk~~~t~kAAylv   99 (1431)
T KOG1240|consen   25 CHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIKFA---LMKAPNCLPFQKVLVTDKAAYLV   99 (1431)
T ss_pred             eeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHHHH---hhcCCcccchHHHHHhhHHHHHH
Confidence            4455899999999999998765 3 39999985432 1 112222222222211   12679999999998899999999


Q ss_pred             EeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC--CCCCCCc
Q 017021          123 FEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL--HTPKDSS  200 (379)
Q Consensus       123 ~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~--~~~~~~~  200 (379)
                      =+|...+|.|.+.-..  -+...+...|+.||+.||..+|..||+|||||.+|||+..=..+.+.||...+  +.|.+.-
T Consensus       100 RqyvkhnLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP  177 (1431)
T KOG1240|consen  100 RQYVKHNLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP  177 (1431)
T ss_pred             HHHHhhhhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence            9999999999998765  47788999999999999999999999999999999999887788888887442  2222111


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCC----------C-CCCccchHhHHHHHHHHHh-CCCC
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL----------G-WTYPCDIWSVGCILVELCT-GEAL  268 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~sDvwSlG~il~~l~~-g~~p  268 (379)
                                   +||+.-.....      .-.+|+|||.+...          + .+++-||||+||+++||++ |.+|
T Consensus       178 -------------adf~fFFDTSr------RRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~Pl  238 (1431)
T KOG1240|consen  178 -------------ADFTFFFDTSR------RRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPL  238 (1431)
T ss_pred             -------------ccceEEEecCC------ceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCc
Confidence                         24443221111      12379999998541          2 6688899999999999987 8888


Q ss_pred             CCCCchHHHHHHHHHHc---CCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          269 FQTHENLEHLAMMERVL---GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                      |.-..       +..+.   ...++..+                             +.               .....+
T Consensus       239 F~LSQ-------L~aYr~~~~~~~e~~L-----------------------------e~---------------Ied~~~  267 (1431)
T KOG1240|consen  239 FTLSQ-------LLAYRSGNADDPEQLL-----------------------------EK---------------IEDVSL  267 (1431)
T ss_pred             ccHHH-------HHhHhccCccCHHHHH-----------------------------Hh---------------CcCccH
Confidence            85211       11111   11111111                             11               123468


Q ss_pred             HHHHhhccccCCCCCcCHHHHhcC
Q 017021          346 THLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      +++|..|++.||++|.+|++.|+-
T Consensus       268 Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  268 RNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HHHHHHHHccCchhccCHHHHHHh
Confidence            889999999999999999999964

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.88  E-value=5.4e-23  Score=204.75  Aligned_cols=238  Identities=25%  Similarity=0.358  Sum_probs=165.8

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .-.+..++.|..|+||.||.++++.|.+.+|+|+ +++....+.      ++..                    .+..+.
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~lilRn------ilt~--------------------a~npfv  134 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNLILRN------ILTF--------------------AGNPFV  134 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhcc-cccchhhhc------cccc--------------------cCCcce
Confidence            3445566889999999999999999999999954 322110000      1111                    112222


Q ss_pred             EEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          122 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      |     |+=...+...+  .++..        ++.+++|+|+-||+|||+||+|.+|..-|.+|+.|||++..-...-..
T Consensus       135 v-----gDc~tllk~~g--~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at  199 (1205)
T KOG0606|consen  135 V-----GDCATLLKNIG--PLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT  199 (1205)
T ss_pred             e-----chhhhhcccCC--CCcch--------hhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence            2     44444444433  23332        277899999999999999999999988888888888877432221111


Q ss_pred             cccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM  281 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~  281 (379)
                      .   ...+.++-    .++.+.  ....+||+.|.|||++..+.|+.++|+|++|+|+|+.+-|..||.+....+.+.++
T Consensus       200 n---l~eg~I~k----~t~Ef~--dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~v  270 (1205)
T KOG0606|consen  200 N---LKEGHIEK----DTHEFQ--DKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV  270 (1205)
T ss_pred             h---hhhcchHH----HHHHhh--hccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhh
Confidence            0   01111110    111111  12348999999999999999999999999999999999999999999888888776


Q ss_pred             HHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCc
Q 017021          282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  361 (379)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  361 (379)
                      .......|+.                                              .+...++++++|.++|+.+|..|.
T Consensus       271 isd~i~wpE~----------------------------------------------dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  271 ISDDIEWPEE----------------------------------------------DEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             hhhhcccccc----------------------------------------------CcCCCHHHHHHHHHHHHhChHhhc
Confidence            6655544432                                              124668999999999999999997


Q ss_pred             ---CHHHHhcCCCCCCCC
Q 017021          362 ---TAREALRHPFFTRDH  376 (379)
Q Consensus       362 ---ta~e~l~hp~f~~~~  376 (379)
                         .+-++-+|+||..=.
T Consensus       305 gt~ga~evk~h~ff~~LD  322 (1205)
T KOG0606|consen  305 GTGGALEVKQHGFFQLLD  322 (1205)
T ss_pred             ccchhhhhhhccceeecc
Confidence               688899999998643

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.87  E-value=3.9e-22  Score=201.95  Aligned_cols=209  Identities=22%  Similarity=0.303  Sum_probs=168.4

Q ss_pred             eeeeeeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           32 FNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        32 ~~~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      .+...-+...+..|.|.+.||+|+||+||.|.... |++||||+-+....|...+.  .+++.+|.  ..--+-++.+..
T Consensus       687 l~~~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~--~q~~~RLk--~~~~~~~~~~~~  761 (974)
T KOG1166|consen  687 LNPNTEFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYIC--LQVMERLK--PQMLPSIMHISS  761 (974)
T ss_pred             cCccceeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeeh--HHHHHhhc--hhhhcchHHHHH
Confidence            44566778888899999999999999999999776 99999999887666654443  44444553  112244666667


Q ss_pred             eeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCc
Q 017021          112 WFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                      .+...+..++|++|. .|+|.++++..  +.+++..+..++.|++..+++||.++||||||||+|+|+.....       
T Consensus       762 a~~~~~~S~lv~ey~~~Gtlld~~N~~--~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~-------  832 (974)
T KOG1166|consen  762 AHVFQNASVLVSEYSPYGTLLDLINTN--KVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREIC-------  832 (974)
T ss_pred             HHccCCcceeeeeccccccHHHhhccC--CCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccC-------
Confidence            777788889999999 99999999843  47999999999999999999999999999999999999964321       


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhC
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG  265 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g  265 (379)
                                   .......++|||||.+.......     ....+|..+-|+|...|++++..+|.|.|+.++|.|+-|
T Consensus       833 -------------~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG  899 (974)
T KOG1166|consen  833 -------------ADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFG  899 (974)
T ss_pred             -------------CCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHH
Confidence                         01336779999999886533332     335688999999999999999999999999999999988


Q ss_pred             CC
Q 017021          266 EA  267 (379)
Q Consensus       266 ~~  267 (379)
                      ++
T Consensus       900 ~y  901 (974)
T KOG1166|consen  900 KY  901 (974)
T ss_pred             HH
Confidence            64

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.85  E-value=1.3e-20  Score=161.70  Aligned_cols=137  Identities=19%  Similarity=0.203  Sum_probs=101.7

Q ss_pred             hhccccccceeEEEEEecCCCceEEEEEeeccch---h------------------------hHhHHHHHHHHHHHHhcC
Q 017021           48 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---Y------------------------REAAMIEIEVLQQLAKHD  100 (379)
Q Consensus        48 ~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~------------------------~~~~~~e~~~l~~l~~~~  100 (379)
                      ...||+|++|.||+|.+. +|+.||+|+++....   .                        ......|...+..+.+..
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            478999999999999987 899999999974311   0                        012234888888886533


Q ss_pred             CCCCeeEEecceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH-HHcCCcccCCCCCcEEE
Q 017021          101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM-HDLCMIHTDLKPENVLL  178 (379)
Q Consensus       101 ~~~~~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~L-H~~~iiH~dlkp~Nili  178 (379)
                      ...|.+..      ... .++||||+ |+++.......  ..++...+..++.|++.+|.++ |+.||+||||||+||++
T Consensus        81 v~~p~~~~------~~~-~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli  151 (190)
T cd05147          81 IPCPEPIL------LKS-HVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLY  151 (190)
T ss_pred             CCCCcEEE------ecC-CEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence            22333221      112 38999999 55555443332  2588999999999999999999 79999999999999999


Q ss_pred             ecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCccccc
Q 017021          179 VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE  222 (379)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~  222 (379)
                      +                            ++.++|+|||.|...
T Consensus       152 ~----------------------------~~~v~LiDFG~a~~~  167 (190)
T cd05147         152 H----------------------------DGKLYIIDVSQSVEH  167 (190)
T ss_pred             E----------------------------CCcEEEEEccccccC
Confidence            3                            246899999998743

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.85  E-value=4e-21  Score=167.16  Aligned_cols=168  Identities=13%  Similarity=0.142  Sum_probs=121.1

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHh----------HHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----------AMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~----------~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      ...|++.+.||.|+||.||++.+  ++..+|+|++.........          +.+|+..+.++.+     +++....+
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~-----~GI~~~~d  102 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRS-----EGLASLND  102 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHH-----CCCCcceE
Confidence            56789999999999999999765  4668999999633221111          4567778888844     45555555


Q ss_pred             eeee--------cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccc
Q 017021          112 WFDY--------RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE  182 (379)
Q Consensus       112 ~~~~--------~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~  182 (379)
                      ++..        .+..+++|||+ |.+|.++..      +++    ....+++.+|..+|..|++|||+||+||++.   
T Consensus       103 ~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~---  169 (232)
T PRK10359        103 FYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVS---  169 (232)
T ss_pred             eeeecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEe---
Confidence            5432        34689999999 788987731      333    2355899999999999999999999999993   


Q ss_pred             ccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHH
Q 017021          183 YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL  262 (379)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l  262 (379)
                                              .++ ++|+|||.........         ....+.....+..++|+||||+++...
T Consensus       170 ------------------------~~g-i~liDfg~~~~~~e~~---------a~d~~vler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        170 ------------------------KNG-LRIIDLSGKRCTAQRK---------AKDRIDLERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             ------------------------CCC-EEEEECCCcccccchh---------hHHHHHHHhHhcccccccceeEeehHH
Confidence                                    344 8999999775432211         112244556677899999999997654


Q ss_pred             H
Q 017021          263 C  263 (379)
Q Consensus       263 ~  263 (379)
                      .
T Consensus       216 ~  216 (232)
T PRK10359        216 K  216 (232)
T ss_pred             H
Confidence            4

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.83  E-value=5.4e-20  Score=158.36  Aligned_cols=138  Identities=17%  Similarity=0.123  Sum_probs=100.7

Q ss_pred             hhhccccccceeEEEEEecCCCceEEEEEeeccchh---------------------------hHhHHHHHHHHHHHHhc
Q 017021           47 IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY---------------------------REAAMIEIEVLQQLAKH   99 (379)
Q Consensus        47 i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---------------------------~~~~~~e~~~l~~l~~~   99 (379)
                      |.+.||+|++|.||+|.+. +|+.||+|+++.....                           ......|...+.++.+.
T Consensus         1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   79 (190)
T cd05145           1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA   79 (190)
T ss_pred             CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            3578999999999999987 8999999998743110                           11123577888887553


Q ss_pred             CCCCCeeEEecceeeecceEEEEEeCC-CCCHHHH-HHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcE
Q 017021          100 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDF-LRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENV  176 (379)
Q Consensus       100 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~-l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Ni  176 (379)
                      ....|.   .+..  .  ..|+||||+ |+++... +.. .  .++...+..++.|++.+|.++|+ .|++||||||+||
T Consensus        80 ~i~~p~---~~~~--~--~~~lVmE~~~g~~~~~~~l~~-~--~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NI  149 (190)
T cd05145          80 GVPVPE---PILL--K--KNVLVMEFIGDDGSPAPRLKD-V--PLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNI  149 (190)
T ss_pred             CCCCce---EEEe--c--CCEEEEEEecCCCchhhhhhh-c--cCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhE
Confidence            322222   2211  1  248999999 5544333 333 2  47888999999999999999999 9999999999999


Q ss_pred             EEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccC
Q 017021          177 LLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER  223 (379)
Q Consensus       177 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~  223 (379)
                      ++                           + ++.++|+|||.+....
T Consensus       150 ll---------------------------~-~~~~~liDFG~a~~~~  168 (190)
T cd05145         150 LY---------------------------H-DGKPYIIDVSQAVELD  168 (190)
T ss_pred             EE---------------------------E-CCCEEEEEcccceecC
Confidence            99                           3 4568999999886543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.82  E-value=2.8e-19  Score=152.46  Aligned_cols=181  Identities=18%  Similarity=0.171  Sum_probs=133.9

Q ss_pred             hhhccccccceeEEEEEecCCCceEEEEEeeccchhhH-----hHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           47 IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE-----AAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        47 i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~-----~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      +...|++|+||+|+.+..  .+.+++.+.+.....+..     .+.+|++++.++.+    +++++.++++    +..++
T Consensus         6 ~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~----~~~vP~ll~~----~~~~l   75 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDG----LPRTPRLLHW----DGRHL   75 (218)
T ss_pred             cceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCC----CCCCCEEEEE----cCEEE
Confidence            558899999999998864  678899888875554333     46789999999843    3456666654    34699


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCC-CCCcEEEecccccccCCCccCCCCCCCC
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDL-KPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dl-kp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +|+|+ |.+|.+....         ....++.|++.+|.++|+.||+|||| ||+||++                     
T Consensus        76 vmeyI~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv---------------------  125 (218)
T PRK12274         76 DRSYLAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLV---------------------  125 (218)
T ss_pred             EEeeecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEE---------------------
Confidence            99999 8888654321         11346789999999999999999999 7999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCCCc----------------ccccCCccchhhhhCC-CCC-CccchHhHHHHHHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQNY----------------IVSTRHYRAPEVILGL-GWT-YPCDIWSVGCILVE  261 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~----------------~~gt~~y~aPE~~~~~-~~~-~~sDvwSlG~il~~  261 (379)
                            +.++.++|+|||.+.........                ...++.++.|+...-. ..+ ...+.++.|+-+|.
T Consensus       126 ------~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~  199 (218)
T PRK12274        126 ------QEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYR  199 (218)
T ss_pred             ------cCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHH
Confidence                  44566888899888755544311                1246778888765332 334 66788999999999


Q ss_pred             HHhCCCCCCCCc
Q 017021          262 LCTGEALFQTHE  273 (379)
Q Consensus       262 l~~g~~pf~~~~  273 (379)
                      ++|+..|..+.+
T Consensus       200 ~~~~~~~~~~~~  211 (218)
T PRK12274        200 FVTRRVLHWEDN  211 (218)
T ss_pred             HHhccCCccccC
Confidence            999999886644

>PRK10345 hypothetical protein; Provisional

Probab=99.82  E-value=3.7e-19  Score=154.29  Aligned_cols=140  Identities=18%  Similarity=0.181  Sum_probs=110.7

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc---eEE-EEE
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN---HIC-IVF  123 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~---~~~-lv~  123 (379)
                      +.||+|++|.||.  ++.++.. +||++... ........+|+..+..+.+....|+||++++++++++.   .++ +|+
T Consensus         8 ~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~   84 (210)
T PRK10345          8 SPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA   84 (210)
T ss_pred             ceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence            7899999999995  6777766 69988643 23456788899999999776678899999999999873   434 789


Q ss_pred             eCC---CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHH-HHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          124 EKL---GSSLYDFLRKNNYRSFPIDLVREIARQLLECI-AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       124 e~~---~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL-~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      ||.   +++|.+++.+.   .+++.  ..++.+++.++ +|||+.+|+||||||+||+++..+                 
T Consensus        85 e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~-----------------  142 (210)
T PRK10345         85 DFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRIS-----------------  142 (210)
T ss_pred             cCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccC-----------------
Confidence            995   58999999663   35555  35677888788 999999999999999999996432                 


Q ss_pred             cccccCCCCCCeEEeecCcc
Q 017021          200 SYFKRMPKSSAIKVIDFGST  219 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~  219 (379)
                            +.+..++|+|++.+
T Consensus       143 ------~~~~~~~LiDg~G~  156 (210)
T PRK10345        143 ------ESEVIPVVCDNIGE  156 (210)
T ss_pred             ------CCCCcEEEEECCCC
Confidence                  34568999995544

>smart00090 RIO RIO-like kinase

Probab=99.79  E-value=1e-18  Score=155.05  Aligned_cols=144  Identities=21%  Similarity=0.185  Sum_probs=107.8

Q ss_pred             chhhhhhhhccccccceeEEEEE-ecCCCceEEEEEeeccch-------------------------hhHhHHHHHHHHH
Q 017021           41 SAFADKIHSKMGEGTFGQVLECW-DRERKEMVAIKIVRGIKK-------------------------YREAAMIEIEVLQ   94 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~-~~~~~~~vAiK~~~~~~~-------------------------~~~~~~~e~~~l~   94 (379)
                      .+.-|+|.+.||+|++|.||+|. +..+|+.||+|++.....                         .......|...+.
T Consensus        26 ~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~  105 (237)
T smart00090       26 RGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQ  105 (237)
T ss_pred             cCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHH
Confidence            34468899999999999999999 677899999999874321                         0122456888888


Q ss_pred             HHHhcCCCCCeeEEecceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CcccCCC
Q 017021           95 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC-MIHTDLK  172 (379)
Q Consensus        95 ~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-iiH~dlk  172 (379)
                      ++.+.   ...++..+..    ...++||||+ |.+|........  .+....+..++.|++.+|.+||+.| ++|||+|
T Consensus       106 ~L~~~---~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dik  176 (237)
T smart00090      106 RLYEA---GVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV--EPEEEEEFELYDDILEEMRKLYKEGELVHGDLS  176 (237)
T ss_pred             HHHhc---CCCCCeeeEe----cCceEEEEEecCCcccccccccC--CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCC
Confidence            88542   2223333332    2348999999 667765543322  4566677899999999999999999 9999999


Q ss_pred             CCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccc
Q 017021          173 PENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY  221 (379)
Q Consensus       173 p~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~  221 (379)
                      |+||++                           + +..++|+|||.+..
T Consensus       177 p~NIli---------------------------~-~~~i~LiDFg~a~~  197 (237)
T smart00090      177 EYNILV---------------------------H-DGKVVIIDVSQSVE  197 (237)
T ss_pred             hhhEEE---------------------------E-CCCEEEEEChhhhc
Confidence            999999                           4 45689999998764

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.79  E-value=1.4e-19  Score=155.84  Aligned_cols=247  Identities=16%  Similarity=0.153  Sum_probs=178.5

Q ss_pred             eeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeec---cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           36 TYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        36 ~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      .|..+.-....+..+|.+...|..|++++..  ..++.|+++-   ...-.+.+..|.-.+.-+     .||||..+++.
T Consensus       183 r~~gid~~~lnl~tkl~e~hsgelwrgrwqg--ndivakil~vr~~t~risrdfneefp~lrif-----shpnilpvlga  255 (448)
T KOG0195|consen  183 RYTGIDVSSLNLITKLAESHSGELWRGRWQG--NDIVAKILNVREVTARISRDFNEEFPALRIF-----SHPNILPVLGA  255 (448)
T ss_pred             cccCcchhhhhhhhhhccCCCcccccccccC--cchhhhhhhhhhcchhhcchhhhhCcceeee-----cCCchhhhhhh
Confidence            3444444445677899999999999998764  4577888752   223345555666666555     78999999999


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecccccccCCC
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                      +..+.++.++..|+ .++|..++.....--....++.+++.+++.|++|||+..  |.--.+...+++++.+-.      
T Consensus       256 cnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedlt------  329 (448)
T KOG0195|consen  256 CNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLT------  329 (448)
T ss_pred             ccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhh------
Confidence            99999999999999 899999998876445677899999999999999999865  334478889999965322      


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCC---CccchHhHHHHHHHHHhCC
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWT---YPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~sDvwSlG~il~~l~~g~  266 (379)
                                         ..+..+|-.++..    .....-.+.|++||.+...+-+   .++|+|||++++|||.|+.
T Consensus       330 -------------------arismad~kfsfq----e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~tre  386 (448)
T KOG0195|consen  330 -------------------ARISMADTKFSFQ----EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTRE  386 (448)
T ss_pred             -------------------hheecccceeeee----ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccc
Confidence                               2233333322221    1122346789999999876533   6789999999999999999


Q ss_pred             CCCCCCchHHHHHH--HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          267 ALFQTHENLEHLAM--MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       267 ~pf~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      .||..-.+.|---.  ++.....                       +                          ++..+..
T Consensus       387 vpfadlspmecgmkialeglrv~-----------------------i--------------------------ppgis~h  417 (448)
T KOG0195|consen  387 VPFADLSPMECGMKIALEGLRVH-----------------------I--------------------------PPGISRH  417 (448)
T ss_pred             cccccCCchhhhhhhhhcccccc-----------------------C--------------------------CCCccHH
Confidence            99976555442211  1111111                       1                          1346788


Q ss_pred             HHHHHhhccccCCCCCcCHHHHh
Q 017021          345 LTHLLQGLLRYDPTDRLTAREAL  367 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l  367 (379)
                      ...|++-|+..||.+||..+.++
T Consensus       418 m~klm~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  418 MNKLMNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             HHHHHHHHhcCCCCcCCCcceeh
Confidence            99999999999999999988775

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.75  E-value=9.7e-19  Score=163.68  Aligned_cols=183  Identities=27%  Similarity=0.420  Sum_probs=132.0

Q ss_pred             eEEEEEeCC-CCCHHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~-~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      ++||.|++| ..+|.+++.. ......+......++.|+..|++|   +|.+|+|+||.||++..+.+.||.|||+....
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~  406 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ  406 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence            689999999 8999999974 344456788999999999999999   99999999999999977777777777766544


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCch
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  274 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~  274 (379)
                      ....+.                  ..........+||..|++||.+.++.|+.++||||||++++|++. -...+.    
T Consensus       407 ~~~~~~------------------~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e----  464 (516)
T KOG1033|consen  407 DKDETV------------------APAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE----  464 (516)
T ss_pred             ccCCcc------------------cchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH----
Confidence            332200                  000011123479999999999999999999999999999999997 222222    


Q ss_pred             HHHHHHHHHH-cCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          275 LEHLAMMERV-LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       275 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                        .......+ -|..|+..+.                                              .-+.-.+|+++||
T Consensus       465 --r~~t~~d~r~g~ip~~~~~----------------------------------------------d~p~e~~ll~~ll  496 (516)
T KOG1033|consen  465 --RIATLTDIRDGIIPPEFLQ----------------------------------------------DYPEEYTLLQQLL  496 (516)
T ss_pred             --HHHhhhhhhcCCCChHHhh----------------------------------------------cCcHHHHHHHHhc
Confidence              11111111 1233322111                                              1234567999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFT  373 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~  373 (379)
                      ...|.+||++.+.--|+|.+
T Consensus       497 s~~p~~RP~~~~~~~~~~~~  516 (516)
T KOG1033|consen  497 SPSPEERPSAIEVALHEFLQ  516 (516)
T ss_pred             CCCcccCchHHHHhhhhhcC
Confidence            99999999999888888753

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.72  E-value=8.6e-17  Score=140.78  Aligned_cols=132  Identities=22%  Similarity=0.274  Sum_probs=100.8

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccch---------hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---------~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      +.||+|++|.||+|.+  .|..+++|+......         .......|..++..+.+     ++++....++......
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-----~~i~~p~~~~~~~~~~   74 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARK-----AGVNVPAVYFVDPENF   74 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHH-----CCCCCCeEEEEeCCCC
Confidence            6799999999999986  677899998653211         12345668888888754     2232222334455678


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      +++|||+ |++|.+++....     . ....++.+++.+|.++|+.|++|||++|.||++                    
T Consensus        75 ~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~--------------------  128 (211)
T PRK14879         75 IIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMIL--------------------  128 (211)
T ss_pred             EEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEE--------------------
Confidence            8999999 889999986532     2 778889999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccc
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTY  221 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~  221 (379)
                             + +..++++|||.+..
T Consensus       129 -------~-~~~~~liDf~~a~~  143 (211)
T PRK14879        129 -------S-GGKIYLIDFGLAEF  143 (211)
T ss_pred             -------E-CCCEEEEECCcccC
Confidence                   3 45688999998764

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.70  E-value=9.9e-17  Score=152.80  Aligned_cols=196  Identities=20%  Similarity=0.247  Sum_probs=141.4

Q ss_pred             CCCeeEEecceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCC-cccCCCCCcEEEe
Q 017021          102 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM-IHTDLKPENVLLV  179 (379)
Q Consensus       102 ~~~~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i-iH~dlkp~Nili~  179 (379)
                      .|.|+.++.+...++...++|.+|| .|+|.+.+.... -.++......++.+|+.||.|+|...| .|+.+++.|++++
T Consensus         5 ~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~-~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd   83 (484)
T KOG1023|consen    5 DHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED-IKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVD   83 (484)
T ss_pred             chhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc-cCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceee
Confidence            6788999999999999999999999 999999998843 357888999999999999999997665 9999999999995


Q ss_pred             cccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCC-----CCCcccccCCccchhhhhCCC-------CC
Q 017021          180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-----DQNYIVSTRHYRAPEVILGLG-------WT  247 (379)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~-------~~  247 (379)
                      ..+                           .+||+|||+......     ......-...|.|||.+.+..       .+
T Consensus        84 ~~w---------------------------~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~  136 (484)
T KOG1023|consen   84 SRW---------------------------VLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALT  136 (484)
T ss_pred             eeE---------------------------EEEechhhhcccccccccccccchhHHHHhccCHHHhccccccccccccc
Confidence            555                           455555555443321     001112345789999997631       46


Q ss_pred             CccchHhHHHHHHHHHhCCCCCCCCch----HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhh
Q 017021          248 YPCDIWSVGCILVELCTGEALFQTHEN----LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS  323 (379)
Q Consensus       248 ~~sDvwSlG~il~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (379)
                      .+.|+||+|++++|+++.+.||.....    .+....+.+ .+..+                                  
T Consensus       137 ~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~-~~~~~----------------------------------  181 (484)
T KOG1023|consen  137 QKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK-GGSNP----------------------------------  181 (484)
T ss_pred             ccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh-cCCCC----------------------------------
Confidence            789999999999999999999975322    233333332 01000                                  


Q ss_pred             hccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHh
Q 017021          324 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL  367 (379)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l  367 (379)
                        ..|.....    . ...+++..++++||..+|..||+++++-
T Consensus       182 --~rP~i~~~----~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~  218 (484)
T KOG1023|consen  182 --FRPSIELL----N-ELPPELLLLVARCWEEIPEKRPSIEQIR  218 (484)
T ss_pred             --cCcchhhh----h-hcchHHHHHHHHhcccChhhCccHHHHH
Confidence              00111100    0 2334788899999999999999999874

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.70  E-value=3.9e-16  Score=135.30  Aligned_cols=137  Identities=24%  Similarity=0.267  Sum_probs=100.3

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccch-----------------------hhHhHHHHHHHHHHHHhcC
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-----------------------YREAAMIEIEVLQQLAKHD  100 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-----------------------~~~~~~~e~~~l~~l~~~~  100 (379)
                      .|.+.+.||+|+||.||++... +|+.||+|++.....                       .......|...+..+.+..
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   94 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG   94 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence            5788899999999999999875 799999998763210                       1112456777777774421


Q ss_pred             CCCCeeEEecceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEe
Q 017021          101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV  179 (379)
Q Consensus       101 ~~~~~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~  179 (379)
                         ..++..++    ....+++|||+ |++|.++...        .....++.+++.++.++|+.|++|||++|+||++ 
T Consensus        95 ---i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill-  158 (198)
T cd05144          95 ---FPVPKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILV-  158 (198)
T ss_pred             ---CCCCceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEE-
Confidence               12333322    23458999999 7788655321        3355678899999999999999999999999999 


Q ss_pred             cccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccC
Q 017021          180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER  223 (379)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~  223 (379)
                                                +.+..++|+|||.+....
T Consensus       159 --------------------------~~~~~~~liDfg~~~~~~  176 (198)
T cd05144         159 --------------------------DDDEKIYIIDWPQMVSTD  176 (198)
T ss_pred             --------------------------cCCCcEEEEECCccccCC
Confidence                                      556788999999886433

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.67  E-value=5.9e-16  Score=134.23  Aligned_cols=128  Identities=21%  Similarity=0.252  Sum_probs=95.8

Q ss_pred             ccccccceeEEEEEecCCCceEEEEEeeccc----h-----hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           50 KMGEGTFGQVLECWDRERKEMVAIKIVRGIK----K-----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        50 ~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~-----~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .||+|++|.||++.  .++..+++|......    .     .......|..++..+.+..   .+++..+.  ......+
T Consensus         1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~---i~~p~~~~--~~~~~~~   73 (199)
T TIGR03724         1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAG---VNTPVVYD--VDPDNKT   73 (199)
T ss_pred             CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCC---CCCCEEEE--EECCCCE
Confidence            37999999999998  456789999864211    0     1244557888888885532   12333332  3455678


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      ++|||+ |++|.+++....   .      .++.+++.+|.++|+.|++|||++|.||++                     
T Consensus        74 lv~e~~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~---------------------  123 (199)
T TIGR03724        74 IVMEYIEGKPLKDVIEEGN---D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIV---------------------  123 (199)
T ss_pred             EEEEEECCccHHHHHhhcH---H------HHHHHHHHHHHHHHHCCeecCCCCcceEEE---------------------
Confidence            999999 899998875532   1      778899999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccc
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTY  221 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~  221 (379)
                            + +..++++|||.+..
T Consensus       124 ------~-~~~~~liDfg~a~~  138 (199)
T TIGR03724       124 ------R-DDKLYLIDFGLGKY  138 (199)
T ss_pred             ------E-CCcEEEEECCCCcC
Confidence                  3 46688999998764

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.66  E-value=5.6e-18  Score=168.30  Aligned_cols=259  Identities=20%  Similarity=0.291  Sum_probs=186.2

Q ss_pred             chhhhhhhhccccccceeEEEEEec-CCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDR-ERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~-~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      ....|++.+.||+|+|+.|-.+.+. .+...+|.|.+....   .....+..|..+-..+    ..|.|++.+++.....
T Consensus        18 ~~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~----s~h~n~~~~~~~~~~~   93 (601)
T KOG0590|consen   18 PNSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKL----SKHSNTVHMIEPSSSP   93 (601)
T ss_pred             ccccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccc----cccccccccCCccCCC
Confidence            4667888899999999999888764 445667777775332   2222222344443333    2378999999999999


Q ss_pred             ceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCCcccCCCCCcEEEeccc-ccccCCCccCC
Q 017021          117 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-DLCMIHTDLKPENVLLVSSE-YIKVPDYKSSL  193 (379)
Q Consensus       117 ~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~iiH~dlkp~Nili~~~~-~~~~~~~~~~~  193 (379)
                      ...++++++. |+++.+.+........+...+..++.|+..++.|+| ..++.|+|+||+|.+++.++ .+++       
T Consensus        94 ~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~-------  166 (601)
T KOG0590|consen   94 RSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKI-------  166 (601)
T ss_pred             cccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccC-------
Confidence            9999999999 888888774322225777888899999999999999 99999999999999996655 4444       


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCC-CC-----Ccccc-cCCccchhhhhCCCC-CCccchHhHHHHHHHHHhC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-DQ-----NYIVS-TRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTG  265 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~-~~-----~~~~g-t~~y~aPE~~~~~~~-~~~sDvwSlG~il~~l~~g  265 (379)
                                          .|||.|..... ..     ...+| ++.|.|||...+..+ .+..|+||+|+++..+++|
T Consensus       167 --------------------~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g  226 (601)
T KOG0590|consen  167 --------------------ADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTG  226 (601)
T ss_pred             --------------------CCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccC
Confidence                                45554433222 11     22467 899999999988654 5888999999999999999


Q ss_pred             CCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          266 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       266 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                      ..|+.........                             ...|.+..               .......+...+..+
T Consensus       227 ~~p~~~~~~~~~~-----------------------------~~~~~~~~---------------~~~~~~~~~~~~~~~  262 (601)
T KOG0590|consen  227 ELPWDFPSRKDGR-----------------------------YSSWKSNK---------------GRFTQLPWNSISDQA  262 (601)
T ss_pred             CCCcccccccccc-----------------------------ceeecccc---------------cccccCccccCChhh
Confidence            9998754332100                             00000000               000011234567788


Q ss_pred             HHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          346 THLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      .+++.++|..+|+.|.+.+++-.+||+..
T Consensus       263 ~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  263 HDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             hhcccccccCCchhccccccccccccccc
Confidence            99999999999999999999999999987

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.64  E-value=2.9e-15  Score=128.52  Aligned_cols=135  Identities=22%  Similarity=0.241  Sum_probs=91.6

Q ss_pred             hhccccccceeEEEEEecCCCceEEEEEeeccchhh---Hh----------------------HHHHHHHHHHHHhcCCC
Q 017021           48 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR---EA----------------------AMIEIEVLQQLAKHDKG  102 (379)
Q Consensus        48 ~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~---~~----------------------~~~e~~~l~~l~~~~~~  102 (379)
                      .+.||+|+||.||+|.+. +|+.||+|++.......   ..                      ...|...+..+....  
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--   78 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAG--   78 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcC--
Confidence            578999999999999976 79999999987432111   00                      123555555554322  


Q ss_pred             CCeeEEecceeeecceEEEEEeCC-CCCHH-HHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEe
Q 017021          103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLY-DFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLV  179 (379)
Q Consensus       103 ~~~i~~~~~~~~~~~~~~lv~e~~-~~sL~-~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~  179 (379)
                       ..++..+..    ...+++|||+ ++++. ..+....   .. ..+..++.+++.++.++|+ .|++|||+||+||++ 
T Consensus        79 -~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili-  148 (187)
T cd05119          79 -VPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILV-  148 (187)
T ss_pred             -CCCCceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEE-
Confidence             112222221    2358999999 53321 1122111   11 5678899999999999999 999999999999999 


Q ss_pred             cccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCccccc
Q 017021          180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE  222 (379)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~  222 (379)
                                                + ++.++|+|||.+...
T Consensus       149 --------------------------~-~~~~~liDfg~a~~~  164 (187)
T cd05119         149 --------------------------D-DGKVYIIDVPQAVEI  164 (187)
T ss_pred             --------------------------E-CCcEEEEECcccccc
Confidence                                      4 567889999988643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.62  E-value=4e-15  Score=148.02  Aligned_cols=133  Identities=22%  Similarity=0.212  Sum_probs=98.3

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc----c-----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----K-----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~-----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      .|...+.||+|+||+||++.+...  .+++|+....    .     ........|..++..+.     +++++....+..
T Consensus       334 ~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----~~~i~~p~~~~~  406 (535)
T PRK09605        334 RKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR-----RAGVPTPVIYDV  406 (535)
T ss_pred             ccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc-----ccCCCeeEEEEE
Confidence            345678999999999999976543  3455443211    0     11245667888888883     344544444444


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      .....++||||+ +++|.+++.          ....++.+++.+|.+||+.|++|||+||+||++.              
T Consensus       407 ~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~--------------  462 (535)
T PRK09605        407 DPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR--------------  462 (535)
T ss_pred             eCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE--------------
Confidence            556678999999 899998875          2456889999999999999999999999999992              


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccc
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTY  221 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~  221 (379)
                                    +..++|+|||.++.
T Consensus       463 --------------~~~~~liDFGla~~  476 (535)
T PRK09605        463 --------------DDRLYLIDFGLGKY  476 (535)
T ss_pred             --------------CCcEEEEeCccccc
Confidence                          24688999998864

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.59  E-value=1.2e-15  Score=145.57  Aligned_cols=267  Identities=20%  Similarity=0.242  Sum_probs=185.9

Q ss_pred             eeeeechhhhhhhhcccc--ccceeEEEEEe--cCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEE
Q 017021           36 TYIVFSAFADKIHSKMGE--GTFGQVLECWD--RERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQ  108 (379)
Q Consensus        36 ~~~~~~~~~y~i~~~Lg~--G~~g~V~~~~~--~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~  108 (379)
                      .+..+-.+.+.+.+.+|.  |.+|.||.+..  .+++..+|+|.-+..   ......-++|......+    ..|.+.++
T Consensus       107 ~~~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i----~~~~~~v~  182 (524)
T KOG0601|consen  107 PFDSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKI----DSHENPVR  182 (524)
T ss_pred             CccchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhccccc----Cccccccc
Confidence            344455666778899999  99999999998  899999999984421   12223333444443333    35678888


Q ss_pred             ecceeeecceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHH----HHHHHHHcCCcccCCCCCcEEEecc-cc
Q 017021          109 IRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE----CIAFMHDLCMIHTDLKPENVLLVSS-EY  183 (379)
Q Consensus       109 ~~~~~~~~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~----aL~~LH~~~iiH~dlkp~Nili~~~-~~  183 (379)
                      .+..++..+..|+-+|+|+.+|.++..... ..++...++..+.+...    ||.++|+.+++|-|+||+||+...+ ..
T Consensus       183 ~~~~~e~~~~lfiqtE~~~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s  261 (524)
T KOG0601|consen  183 DSPAWEGSGILFIQTELCGESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTS  261 (524)
T ss_pred             cCcccccCCcceeeeccccchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccce
Confidence            899999999999999999999998887654 24788899999999999    9999999999999999999999655 44


Q ss_pred             cccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHH
Q 017021          184 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC  263 (379)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~  263 (379)
                      +++.||++....                  .+.+++...... ....|..-|++||...+ .++..+|++++|.++.+..
T Consensus       262 ~~~~df~~v~~i------------------~~~~~~~~~~~~-~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~  321 (524)
T KOG0601|consen  262 CKLTDFGLVSKI------------------SDGNFSSVFKVS-KRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAI  321 (524)
T ss_pred             eecCCcceeEEc------------------cCCccccceeee-ecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhH
Confidence            555555433211                  111111111100 00135566999999877 5689999999999999988


Q ss_pred             hCCCCCCCC--chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccc
Q 017021          264 TGEALFQTH--ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  341 (379)
Q Consensus       264 ~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (379)
                      ++..+....  .....   +.+..  .|                                             .++-..-
T Consensus       322 l~~~~~~~g~~~~W~~---~r~~~--ip---------------------------------------------~e~~~~~  351 (524)
T KOG0601|consen  322 LGSHLPSVGKNSSWSQ---LRQGY--IP---------------------------------------------LEFCEGG  351 (524)
T ss_pred             hhcccccCCCCCCccc---ccccc--Cc---------------------------------------------hhhhcCc
Confidence            876655432  11110   00000  11                                             0111234


Q ss_pred             hhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       342 ~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      +.++...+.+|++.+|-.|++++.+++|+++....+
T Consensus       352 s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~  387 (524)
T KOG0601|consen  352 SSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLF  387 (524)
T ss_pred             chhhhhHHHHhcCcchhhhhHHHHHhccccccchhh
Confidence            455666899999999999999999999999876543

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.59  E-value=1.4e-16  Score=140.92  Aligned_cols=242  Identities=19%  Similarity=0.248  Sum_probs=156.6

Q ss_pred             eEEEEEecCCCceEEEEEeecc-----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec-----ceEEEEEeCC-
Q 017021           58 QVLECWDRERKEMVAIKIVRGI-----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKL-  126 (379)
Q Consensus        58 ~V~~~~~~~~~~~vAiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~-----~~~~lv~e~~-  126 (379)
                      .||++.+.+.|.+|+.-.++..     .........-...+.++     .|.|+++++.++.+.     ..+.+++||+ 
T Consensus        81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllql-----vHsnlvkfH~yw~d~K~~e~~rviFiteyms  155 (458)
T KOG1266|consen   81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQL-----VHSNLVKFHKYWTDKKYEEKPRVIFITEYMS  155 (458)
T ss_pred             HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHH-----HHHHHHHHHHhhcccccccccceEEEEeccc
Confidence            4677777888877776555321     11112222233334444     456799999998754     3588899999 


Q ss_pred             CCCHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          127 GSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       127 ~~sL~~~l~~--~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      .+++.+++++  +....+....+.+|+.||+.||.|||+..  |+|+++..+-|++..+|.+|+..-...          
T Consensus       156 sgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~----------  225 (458)
T KOG1266|consen  156 SGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPD----------  225 (458)
T ss_pred             chhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCcc----------
Confidence            9999999976  33456889999999999999999999875  999999999999976665554211100          


Q ss_pred             ccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCC-CCCCchHHHHHHH
Q 017021          203 KRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL-FQTHENLEHLAMM  281 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~p-f~~~~~~~~~~~~  281 (379)
                         ..+..+..+       .........+-++|.+||.-.-...+-++|||++|.+..+|..+..- -.+.+..+.-..+
T Consensus       226 ---s~h~s~~~~-------~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~i  295 (458)
T KOG1266|consen  226 ---STHPSVNST-------REAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENI  295 (458)
T ss_pred             ---ccchhhhhh-------hHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhh
Confidence               000000000       00011122356789999987666677899999999999999887542 2222221111111


Q ss_pred             HHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCc
Q 017021          282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  361 (379)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  361 (379)
                      .+..-.                                                    -...--++++.+||+-.|..||
T Consensus       296 a~~i~~----------------------------------------------------len~lqr~~i~kcl~~eP~~rp  323 (458)
T KOG1266|consen  296 ANVIIG----------------------------------------------------LENGLQRGSITKCLEGEPNGRP  323 (458)
T ss_pred             hhheee----------------------------------------------------ccCccccCcCcccccCCCCCCc
Confidence            111000                                                    0112345689999999999999


Q ss_pred             CHHHHhcCCCCCCCC
Q 017021          362 TAREALRHPFFTRDH  376 (379)
Q Consensus       362 ta~e~l~hp~f~~~~  376 (379)
                      +|.+++.||..-+.+
T Consensus       324 ~ar~llfHpllfeVh  338 (458)
T KOG1266|consen  324 DARLLLFHPLLFEVH  338 (458)
T ss_pred             chhhhhcCceeeecc
Confidence            999999999765543

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.58  E-value=5e-14  Score=125.29  Aligned_cols=134  Identities=20%  Similarity=0.192  Sum_probs=97.0

Q ss_pred             hccc-cccceeEEEEEecCCCceEEEEEeecc--------------chhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           49 SKMG-EGTFGQVLECWDRERKEMVAIKIVRGI--------------KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        49 ~~Lg-~G~~g~V~~~~~~~~~~~vAiK~~~~~--------------~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      ..|| .||.|+||.+...  +..+|||.+...              ......+.+|...+..+.+..   ..++..+...
T Consensus        37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~g---i~vP~pl~~~  111 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAG---LPVPRPIAAR  111 (239)
T ss_pred             ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCC---CCCceeEeee
Confidence            4687 8999999999754  678999988521              122345677999999986533   2234444433


Q ss_pred             ee-cc---eEEEEEeCC-C-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccC
Q 017021          114 DY-RN---HICIVFEKL-G-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  187 (379)
Q Consensus       114 ~~-~~---~~~lv~e~~-~-~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~  187 (379)
                      .. ..   ..++|||++ | .+|.+++...   .++...    +.+|+.+|.+||+.||+||||||.|||+         
T Consensus       112 ~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv---------  175 (239)
T PRK01723        112 VVRHGLFYRADILIERIEGARDLVALLQEA---PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILL---------  175 (239)
T ss_pred             eeecCcceeeeEEEEecCCCCCHHHHHhcC---CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEE---------
Confidence            22 22   245999999 5 5898887653   355543    5689999999999999999999999999         


Q ss_pred             CCccCCCCCCCCcccccCCCCCCeEEeecCcccc
Q 017021          188 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY  221 (379)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~  221 (379)
                                        +.++.++|+|||.+..
T Consensus       176 ------------------~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        176 ------------------DPDGKFWLIDFDRGEL  191 (239)
T ss_pred             ------------------cCCCCEEEEECCCccc
Confidence                              4455799999998753

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.56  E-value=3.4e-14  Score=116.80  Aligned_cols=132  Identities=23%  Similarity=0.302  Sum_probs=104.6

Q ss_pred             hhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC
Q 017021           47 IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  126 (379)
Q Consensus        47 i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~  126 (379)
                      +++.||+|.++.||++....  ..+++|....... ...+..|...+..+.+.   ...++.++.+....+..+++|||+
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~---~~~~p~~~~~~~~~~~~~~v~e~~   75 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-GADREREVAILQLLARK---GLPVPKVLASGESDGWSYLLMEWI   75 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc-hhHHHHHHHHHHHHHHc---CCCCCeEEEEcCCCCccEEEEEec
Confidence            45789999999999998654  6799999875433 45677899999998664   245777777777778899999999


Q ss_pred             -CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc---CCcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          127 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL---CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       127 -~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                       +.++..+         +......++.+++.+|..+|..   +++|+|++|.||++                        
T Consensus        76 ~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~------------------------  122 (155)
T cd05120          76 EGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILV------------------------  122 (155)
T ss_pred             CCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEE------------------------
Confidence             6555433         4456667788999999999985   69999999999999                        


Q ss_pred             ccCCCCCCeEEeecCccc
Q 017021          203 KRMPKSSAIKVIDFGSTT  220 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~  220 (379)
                         +....++++|||.+.
T Consensus       123 ---~~~~~~~l~Df~~~~  137 (155)
T cd05120         123 ---DDGKILGIIDWEYAG  137 (155)
T ss_pred             ---ECCcEEEEEeccccc
Confidence               345678999998875

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.53  E-value=5.3e-15  Score=148.35  Aligned_cols=280  Identities=21%  Similarity=0.275  Sum_probs=191.6

Q ss_pred             hhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeC
Q 017021           46 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEK  125 (379)
Q Consensus        46 ~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~  125 (379)
                      .+.+.+-+|.++.++.+.-..+|...+.|.......-.....+++..-..+. ....+|.++.....+....-.+++++|
T Consensus       807 ~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~-i~p~~P~v~~~~~s~~~rsP~~L~~~~  885 (1205)
T KOG0606|consen  807 EITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNIL-ITPRSPAVVRSFPSFPCRSPLPLVGHY  885 (1205)
T ss_pred             eecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCcc-ccCCCCceecccCCCCCCCCcchhhHH
Confidence            4556888999999999987788877777766533222221111111111111 101334455444445556778999999


Q ss_pred             C-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCc-cCCCCCCCCcccc
Q 017021          126 L-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK-SSLHTPKDSSYFK  203 (379)
Q Consensus       126 ~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~-~~~~~~~~~~~~~  203 (379)
                      . +++|...+.+.+  ....+.++..+..+.+++++||+..+.|+|++|.|.+....+..++++|+ +...-.-......
T Consensus       886 ~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~  963 (1205)
T KOG0606|consen  886 LNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDL  963 (1205)
T ss_pred             hccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCcCCc
Confidence            9 889998888766  56777888889999999999999999999999999999999999999998 3322111111100


Q ss_pred             -cCCCCCCeEEeecCcccc--cC-----CCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          204 -RMPKSSAIKVIDFGSTTY--ER-----PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       204 -~~~~~~~~~l~Dfg~~~~--~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                       .....+...  +++-...  ..     .......||+.|.+||.+.+...+..+|+|++|+++++.++|.+||......
T Consensus       964 sg~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq 1041 (1205)
T KOG0606|consen  964 SGPSSSGTPR--RLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQ 1041 (1205)
T ss_pred             ccccccCccc--cccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchh
Confidence             001111111  1111111  00     1123357899999999999999999999999999999999999999876665


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      ..+..+                       -++.++||..+                       ...+..+.+++...|..
T Consensus      1042 ~~f~ni-----------------------~~~~~~~p~g~-----------------------~~~s~~aq~~~~~ll~~ 1075 (1205)
T KOG0606|consen 1042 QIFENI-----------------------LNRDIPWPEGP-----------------------EEGSYEAQDLINRLLTE 1075 (1205)
T ss_pred             hhhhcc-----------------------ccCCCCCCCCc-----------------------cccChhhhhhhhhhhcc
Confidence            544322                       22334444321                       23567899999999999


Q ss_pred             CCCCCcCHH---HHhcCCCCCCCC
Q 017021          356 DPTDRLTAR---EALRHPFFTRDH  376 (379)
Q Consensus       356 dP~~Rpta~---e~l~hp~f~~~~  376 (379)
                      +|.+|..|.   ++-.||||+...
T Consensus      1076 ~~~qr~~a~~~~e~k~~~~~~~~~ 1099 (1205)
T KOG0606|consen 1076 EPTQRLGAKGAAEVKGHPFFQDVD 1099 (1205)
T ss_pred             CchhccCcccccccccCCccCCCC
Confidence            999999888   999999998764

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.42  E-value=1.6e-12  Score=125.44  Aligned_cols=143  Identities=18%  Similarity=0.207  Sum_probs=94.3

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchh-----------------------------------------hHhHH
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-----------------------------------------REAAM   87 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-----------------------------------------~~~~~   87 (379)
                      +.||+|++|.||+|+.+ +|+.||||+....-..                                         +-.+.
T Consensus       123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            57999999999999865 6899999998532100                                         01233


Q ss_pred             HHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHH-HHHHHHHcC
Q 017021           88 IEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE-CIAFMHDLC  165 (379)
Q Consensus        88 ~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~-aL~~LH~~~  165 (379)
                      .|...+.++.....+++.+..-.-+.+.....++||||+ |.+|.++...... ....   ..++..++. .+..+|..|
T Consensus       202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~---~~ia~~~~~~~l~ql~~~g  277 (437)
T TIGR01982       202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GLDR---KALAENLARSFLNQVLRDG  277 (437)
T ss_pred             HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CCCH---HHHHHHHHHHHHHHHHhCC
Confidence            455555666554444443322222222334579999999 8899887654211 1222   234444444 467889999


Q ss_pred             CcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccC
Q 017021          166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER  223 (379)
Q Consensus       166 iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~  223 (379)
                      ++|+|+||.||++                           ..++.++++|||.+....
T Consensus       278 ~~H~D~hPgNilv---------------------------~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       278 FFHADLHPGNIFV---------------------------LKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             ceeCCCCcccEEE---------------------------CCCCcEEEEeCCCeeECC
Confidence            9999999999999                           556678999999886543

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.36  E-value=5.7e-12  Score=123.31  Aligned_cols=145  Identities=18%  Similarity=0.263  Sum_probs=91.8

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccch-----------------------------------hh------HhHH
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-----------------------------------YR------EAAM   87 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-----------------------------------~~------~~~~   87 (379)
                      +.||+|++|.||+|+.+.+|+.||||+....-.                                   ..      -.+.
T Consensus       125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~  204 (537)
T PRK04750        125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM  204 (537)
T ss_pred             hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence            689999999999999988899999999863210                                   01      1223


Q ss_pred             HHHHHHHHHHhcCCCCCe--eEEecceeeecceEEEEEeCC-CCCHHHHH--HhCCCC--CCCHHHHHHHHHHHHHHHHH
Q 017021           88 IEIEVLQQLAKHDKGGNR--CVQIRNWFDYRNHICIVFEKL-GSSLYDFL--RKNNYR--SFPIDLVREIARQLLECIAF  160 (379)
Q Consensus        88 ~e~~~l~~l~~~~~~~~~--i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l--~~~~~~--~l~~~~~~~~~~qi~~aL~~  160 (379)
                      .|...+.++.....+.+.  ++.++  .+.....++||||+ |+.+.++-  ...+..  .+....+..++.|       
T Consensus       205 ~Ea~N~~~~~~~f~~~~~v~VP~v~--~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q-------  275 (537)
T PRK04750        205 REAANASQLRRNFEDSDMLYVPEVY--WDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ-------  275 (537)
T ss_pred             HHHHHHHHHHHHccCCCCeecceee--cccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH-------
Confidence            455555555443322222  22222  22245578999999 88987753  332210  1233333333333       


Q ss_pred             HHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC
Q 017021          161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD  225 (379)
Q Consensus       161 LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~  225 (379)
                      +...|++|+|+||.||++..++                       ...+.++++|||......+.
T Consensus       276 if~~GffHaDpHPGNIlv~~~g-----------------------~~~~~i~llDFGivg~l~~~  317 (537)
T PRK04750        276 VFRDGFFHADMHPGNIFVSYDP-----------------------PENPRYIALDFGIVGSLNKE  317 (537)
T ss_pred             HHhCCeeeCCCChHHeEEecCC-----------------------CCCCeEEEEecceEEECCHH
Confidence            3469999999999999996543                       23357889999988765443

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.35  E-value=3e-11  Score=103.08  Aligned_cols=137  Identities=18%  Similarity=0.222  Sum_probs=96.6

Q ss_pred             hhccccccceeEEEEEecC------CCceEEEEEeecc-------------c----------hhh----HhHHHHHHHHH
Q 017021           48 HSKMGEGTFGQVLECWDRE------RKEMVAIKIVRGI-------------K----------KYR----EAAMIEIEVLQ   94 (379)
Q Consensus        48 ~~~Lg~G~~g~V~~~~~~~------~~~~vAiK~~~~~-------------~----------~~~----~~~~~e~~~l~   94 (379)
                      ..+||.|-=+.||.|....      .+..+|+|+++..             +          .+.    ..+.+|...|.
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            4678999999999997543      3578999998521             0          011    12237899999


Q ss_pred             HHHhcCCCCCeeEEecceeeecceEEEEEeCCCC-CHHH-HHHhCCCCCCCHHHHHHHHHHHHHHHHHH-HHcCCcccCC
Q 017021           95 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGS-SLYD-FLRKNNYRSFPIDLVREIARQLLECIAFM-HDLCMIHTDL  171 (379)
Q Consensus        95 ~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~-sL~~-~l~~~~~~~l~~~~~~~~~~qi~~aL~~L-H~~~iiH~dl  171 (379)
                      ++....-.   ++..+..    ..-++||||+++ .+.. .+...   .++...+..+..+++.+|..+ |+.|++|||+
T Consensus        82 rl~~~Gv~---vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~---~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDL  151 (197)
T cd05146          82 RMQKAGIP---CPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA---KLNDEEMKNAYYQVLSMMKQLYKECNLVHADL  151 (197)
T ss_pred             HHHHcCCC---CCeEEEe----cCCEEEEEEcCCCCccchhhhcc---ccCHHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            98775533   4444433    456789999954 2321 22221   355566777889999999998 8999999999


Q ss_pred             CCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCccccc
Q 017021          172 KPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE  222 (379)
Q Consensus       172 kp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~  222 (379)
                      ++.||++.                            ++.+.++|||.+...
T Consensus       152 s~~NIL~~----------------------------~~~v~iIDF~qav~~  174 (197)
T cd05146         152 SEYNMLWH----------------------------DGKVWFIDVSQSVEP  174 (197)
T ss_pred             CHHHEEEE----------------------------CCcEEEEECCCceeC
Confidence            99999993                            246899999988643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.30  E-value=1.7e-11  Score=103.26  Aligned_cols=126  Identities=17%  Similarity=0.116  Sum_probs=89.9

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-C
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-G  127 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~  127 (379)
                      +.|+.|..+.||++...  ++.|++|+.............|...+..+....    .+++++....  ...++|||++ |
T Consensus         4 ~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~----~~P~~~~~~~--~~~~lv~e~i~G   75 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAG----IGPKLYYFDP--ETGVLITEFIEG   75 (170)
T ss_pred             eecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhC----CCCceEEEeC--CCCeEEEEecCC
Confidence            67889999999999854  778999998644322344567888888875532    1334443332  2357999999 7


Q ss_pred             CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCC-----cccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          128 SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM-----IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       128 ~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i-----iH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      .++.+.    .  ..    ...+..+++.+|..||+.++     +|||++|.||++                        
T Consensus        76 ~~l~~~----~--~~----~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~------------------------  121 (170)
T cd05151          76 SELLTE----D--FS----DPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLL------------------------  121 (170)
T ss_pred             Cccccc----c--cc----CHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEE------------------------
Confidence            666532    0  11    12345789999999999885     999999999999                        


Q ss_pred             ccCCCCCCeEEeecCccc
Q 017021          203 KRMPKSSAIKVIDFGSTT  220 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~  220 (379)
                         + ++.++++||+.+.
T Consensus       122 ---~-~~~~~liDf~~a~  135 (170)
T cd05151         122 ---D-DGRLWLIDWEYAG  135 (170)
T ss_pred             ---E-CCeEEEEeccccc
Confidence               3 3458899999875

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.23  E-value=6.3e-12  Score=120.33  Aligned_cols=253  Identities=21%  Similarity=0.158  Sum_probs=168.4

Q ss_pred             eeechhhhhhhhccccccceeEEEEEec-CCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDR-ERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~-~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      .....-.+..+..||.|.|+.|+..... .++-.|++|...+.   .........|+.....+.    .|.+++.....|
T Consensus       260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~----~~~~~~g~~~~W  335 (524)
T KOG0601|consen  260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILG----SHLPSVGKNSSW  335 (524)
T ss_pred             ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhh----cccccCCCCCCc
Confidence            3344455667799999999999987655 77888999987632   233444455666666663    445677777777


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecc-cccccCCCcc
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSS-EYIKVPDYKS  191 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~-~~~~~~~~~~  191 (379)
                      ......|+--||| ++++.....-..  .+.+...+.+..|++.++.++|+..++|+|+||+||++.++ +..++.    
T Consensus       336 ~~~r~~~ip~e~~~~~s~~l~~~~~~--~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~----  409 (524)
T KOG0601|consen  336 SQLRQGYIPLEFCEGGSSSLRSVTSQ--MLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLG----  409 (524)
T ss_pred             cccccccCchhhhcCcchhhhhHHHH--hcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcc----
Confidence            7777788999999 776655543221  37788899999999999999999999999999999999764 333344    


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCcc--chhhhhCCCCCCccchHhHHHHHHHHHhCCCCC
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR--APEVILGLGWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                                             |||......-......++..+.  +++......+..++|++|||..+.+.+++...-
T Consensus       410 -----------------------~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls  466 (524)
T KOG0601|consen  410 -----------------------DFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLS  466 (524)
T ss_pred             -----------------------ccccccccceecccccccccccccchhhccccccccccccccccccccccccCcccC
Confidence                                   4443322111111112233333  555555667889999999999999999876433


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      .......   .+.+..-+.                                                 .......+..+.
T Consensus       467 ~~~~~~~---~i~~~~~p~-------------------------------------------------~~~~~~~~q~~~  494 (524)
T KOG0601|consen  467 ESGVQSL---TIRSGDTPN-------------------------------------------------LPGLKLQLQVLL  494 (524)
T ss_pred             cccccce---eeecccccC-------------------------------------------------CCchHHhhhhhh
Confidence            2211110   001100000                                                 001224566677


Q ss_pred             hhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          350 QGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ..|...++..|+.+.++..|.-|.+.
T Consensus       495 kv~~~~~~~~~~l~~~l~~~~~~~~~  520 (524)
T KOG0601|consen  495 KVMINPDRKRRPSAVELSLHSEFYRD  520 (524)
T ss_pred             hhhcCCccccchhhhhhcccchhhhh
Confidence            88999999999999999998876543

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.20  E-value=2.1e-10  Score=111.25  Aligned_cols=189  Identities=16%  Similarity=0.211  Sum_probs=130.9

Q ss_pred             eeeeeechhhhhhhhccccccceeEE-EEEecCCCceEEEEEeeccch-hhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           35 ITYIVFSAFADKIHSKMGEGTFGQVL-ECWDRERKEMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        35 ~~~~~~~~~~y~i~~~Lg~G~~g~V~-~~~~~~~~~~vAiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      ++......+-|.| ....-++.+ +| .|..+.++.+|++..++.... +.....+-++.+..+     .||+|+++++.
T Consensus         5 f~~~~~~~fpY~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtl-----RHP~Il~yL~t   77 (690)
T KOG1243|consen    5 FSRDSSSQFPYDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTL-----RHPNILSYLDT   77 (690)
T ss_pred             ecccccccCCccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhc-----cCchhhhhhhh
Confidence            3344455566777 444555555 45 577788899999999874333 234455566667777     67999999999


Q ss_pred             eeecceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          113 FDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-DLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       113 ~~~~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                      ++..+..|+|+|-+.. |...++.     +.......-+.||+.||.||| .++++|++|.-+.|+++..|..|+++|.+
T Consensus        78 ~e~~~~~ylvTErV~P-l~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~  151 (690)
T KOG1243|consen   78 TEEEGTLYLVTERVRP-LETVLKE-----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLEL  151 (690)
T ss_pred             hcccCceEEEeecccc-HHHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEE
Confidence            9999999999999832 5566665     336667777899999999997 78899999999999997666666655543


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhC
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG  265 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g  265 (379)
                      .                           ......   ......-..|..|+.+....  -..|.|.|||++++++.|
T Consensus       152 v---------------------------~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  152 V---------------------------SKASGFNAPAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             E---------------------------eccccCCcccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence            3                           211111   01111122355666543322  345999999999999998

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.07  E-value=6e-09  Score=86.05  Aligned_cols=144  Identities=23%  Similarity=0.185  Sum_probs=103.5

Q ss_pred             hhccccccceeEEEEEecCCCceEEEEEeec---------cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           48 HSKMGEGTFGQVLECWDRERKEMVAIKIVRG---------IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        48 ~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~---------~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ...+-+|+=+.|+++.  ..|+...||.-..         ..-...+..+|...+.+........|   .++  +.+...
T Consensus        12 l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P---~l~--~~D~~~   84 (229)
T KOG3087|consen   12 LELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAP---RLI--FIDTYG   84 (229)
T ss_pred             ceeeeccceeeEeeec--cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCc---eEE--EEecCC
Confidence            4677889999999985  4577777776421         12234566678888888766543333   332  444455


Q ss_pred             EEEEEeCCCC--CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          119 ICIVFEKLGS--SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       119 ~~lv~e~~~~--sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      -.|.||+..|  ++.+++.......-.......++..|-..+.-||..+++||||..+||++.+.               
T Consensus        85 ~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~---------------  149 (229)
T KOG3087|consen   85 GQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSD---------------  149 (229)
T ss_pred             CeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecC---------------
Confidence            5788999955  89999887654444444557888889999999999999999999999999654               


Q ss_pred             CCCcccccCCCCCCeEEeecCccccc
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYE  222 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~  222 (379)
                               .....+.++|||++...
T Consensus       150 ---------~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen  150 ---------GNQITPILIDFGLSSVS  166 (229)
T ss_pred             ---------CCcCceEEEeecchhcc
Confidence                     34455789999998643

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.03  E-value=7.4e-11  Score=114.73  Aligned_cols=165  Identities=20%  Similarity=0.324  Sum_probs=109.5

Q ss_pred             HHHHHHHHH-HcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCccccc
Q 017021          154 LLECIAFMH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVST  232 (379)
Q Consensus       154 i~~aL~~LH-~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt  232 (379)
                      ++.|+.|+| +.++||++|.|++|.++..+.+|++.|+++.-......        .....-|+++.       ......
T Consensus       108 v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~--------~p~~~yd~~lp-------~~~~~~  172 (700)
T KOG2137|consen  108 VADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTE--------YPFSEYDPPLP-------LLLQPH  172 (700)
T ss_pred             ccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCc--------cccccCCCCCC-------hhhccC
Confidence            448999999 67899999999999997777777776665533222110        11111122211       112234


Q ss_pred             CCccchhhhhCCCCCCccchHhHHHHHHHHH-hCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCC
Q 017021          233 RHYRAPEVILGLGWTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  311 (379)
Q Consensus       233 ~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (379)
                      ..|.|||++.+...+.++|++|+||.+|.+. .|+..+...+...... ........+.                  .  
T Consensus       173 ~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~-~~~~~~~~~~------------------~--  231 (700)
T KOG2137|consen  173 LNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS-FSRNLLNAGA------------------F--  231 (700)
T ss_pred             cccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhh-hhhccccccc------------------c--
Confidence            6799999999988889999999999999998 5666555433221111 1111111000                  0  


Q ss_pred             CCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCCcC
Q 017021          312 PEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR  378 (379)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~~  378 (379)
                                              ......+.++++=+.++|..|+..||++.+++..|||.+.-++
T Consensus       232 ------------------------~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~~~  274 (700)
T KOG2137|consen  232 ------------------------GYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPGLK  274 (700)
T ss_pred             ------------------------cccccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCchhh
Confidence                                    0113466789999999999999999999999999999986543

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.02  E-value=2.5e-09  Score=93.94  Aligned_cols=107  Identities=17%  Similarity=0.142  Sum_probs=72.2

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec---ceEEEEE
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---NHICIVF  123 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~---~~~~lv~  123 (379)
                      +.|+.|..+.||++.... |+.+++|+......  .......|..++..+....   ..+++++.+....   +..++||
T Consensus         4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~---~~vp~~~~~~~~~~~~~~~~~v~   79 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTG---VPVPKVLALCEDPSVLGTPFYVM   79 (223)
T ss_pred             eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCC---CCCCCEEEECCCCCccCCceEEE
Confidence            678999999999998643 57899999865432  3456778999988886532   2344444444433   3678999


Q ss_pred             eCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 017021          124 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH  162 (379)
Q Consensus       124 e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH  162 (379)
                      |++ |.++.+.+..   ..++......++.+++.+|..||
T Consensus        80 e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH  116 (223)
T cd05154          80 ERVDGRVLRDRLLR---PELSPEERRALARALADTLAALH  116 (223)
T ss_pred             EEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHh
Confidence            999 7666654421   13556666666667777777776

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.02  E-value=9.8e-09  Score=85.13  Aligned_cols=129  Identities=20%  Similarity=0.206  Sum_probs=92.4

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeecc---------chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGI---------KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---------~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ..+++|+=+.|+.+..  -|..+++|.-...         .-...+...|..++.++....   .+++.++++  +.+.-
T Consensus         2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~G---V~~P~v~dv--D~~~~   74 (204)
T COG3642           2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAG---VPVPIVYDV--DPDNG   74 (204)
T ss_pred             chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcC---CCCCeEEEE--cCCCC
Confidence            4578899999999854  3555777764311         122355567888888887654   344444443  35556


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      .|+|||. |..|.+.+...         ...++..+-.-+.-||..||+|||+.++||++.                   
T Consensus        75 ~I~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~-------------------  126 (204)
T COG3642          75 LIVMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS-------------------  126 (204)
T ss_pred             EEEEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEe-------------------
Confidence            7899999 77888888764         134566677778899999999999999999993                   


Q ss_pred             CcccccCCCCCCeEEeecCcccc
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTY  221 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~  221 (379)
                               +..+.++|||++..
T Consensus       127 ---------~~~i~~IDfGLg~~  140 (204)
T COG3642         127 ---------GGRIYFIDFGLGEF  140 (204)
T ss_pred             ---------CCcEEEEECCcccc
Confidence                     33489999999863

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.96  E-value=4.7e-08  Score=92.53  Aligned_cols=167  Identities=17%  Similarity=0.223  Sum_probs=119.9

Q ss_pred             cceeEEEEEecCCCceEEEEEeeccchhh-HhHHHHHHHHHHHHhcCCCCCeeEEecceeee----cceEEEEEeCC--C
Q 017021           55 TFGQVLECWDRERKEMVAIKIVRGIKKYR-EAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----RNHICIVFEKL--G  127 (379)
Q Consensus        55 ~~g~V~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~----~~~~~lv~e~~--~  127 (379)
                      -..+.|+++...+|..|++|++....... .....-++...++     .|.|++.+.+.|..    +..+++|++|.  .
T Consensus       288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl-----~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s  362 (655)
T KOG3741|consen  288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKL-----CHTNVVPFREVFLTYTFGDLSLVLVYDYYPSS  362 (655)
T ss_pred             ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHh-----ccCceeehhhhhhhhccCcceEEEEEecCCCC
Confidence            34678999999999999999994221111 1222345566666     78999999999984    34689999999  5


Q ss_pred             CCHHHHHHhC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          128 SSLYDFLRKN-------------NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       128 ~sL~~~l~~~-------------~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+|.+.....             .+...+++.+|.++.|+..||.++|+.|+..+-|.|.+|++                
T Consensus       363 ~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv----------------  426 (655)
T KOG3741|consen  363 PTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILV----------------  426 (655)
T ss_pred             chHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEe----------------
Confidence            6888775421             12246789999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                                 .++..++|...|..-....+.         .  |.+.+   -.+-|.-.||.++..|++|..
T Consensus       427 -----------~G~~RIriS~C~i~Dvl~~d~---------~--~~le~---~Qq~D~~~lG~ll~aLAt~~~  474 (655)
T KOG3741|consen  427 -----------TGKMRIRISGCGIMDVLQEDP---------T--EPLES---QQQNDLRDLGLLLLALATGTE  474 (655)
T ss_pred             -----------eCcceEEEecccceeeecCCC---------C--cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence                       455566666555443322221         0  11111   245699999999999999853

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.96  E-value=3.9e-08  Score=88.61  Aligned_cols=141  Identities=18%  Similarity=0.063  Sum_probs=95.2

Q ss_pred             eEEEEEecCCCceEEEEEeeccchh------------hHhHHHHHHHHHHHHhcCCCCCeeEEecceeee--cceEEEEE
Q 017021           58 QVLECWDRERKEMVAIKIVRGIKKY------------REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--RNHICIVF  123 (379)
Q Consensus        58 ~V~~~~~~~~~~~vAiK~~~~~~~~------------~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~--~~~~~lv~  123 (379)
                      .|.++.  ..|+.|.+|........            ...+.+|...+..+.......|..+-+...-..  ....++||
T Consensus        37 rvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt  114 (268)
T PRK15123         37 RTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT  114 (268)
T ss_pred             eEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence            355553  34678999987532210            114678999998887765444544333211111  23578999


Q ss_pred             eCC-CC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          124 EKL-GS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       124 e~~-~~-sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      |++ +. +|.+++........+......++.+++..+.-||..|++|||+++.|||++.+..                  
T Consensus       115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~------------------  176 (268)
T PRK15123        115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFP------------------  176 (268)
T ss_pred             eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEecccc------------------
Confidence            999 43 7999986432224566777889999999999999999999999999999953100                  


Q ss_pred             cccCCCCCCeEEeecCccc
Q 017021          202 FKRMPKSSAIKVIDFGSTT  220 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~  220 (379)
                        .......+.+|||+.+.
T Consensus       177 --~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        177 --GREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             --CCCCCceEEEEECCccc
Confidence              00235679999999774

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.87  E-value=9.5e-09  Score=87.43  Aligned_cols=127  Identities=26%  Similarity=0.312  Sum_probs=76.0

Q ss_pred             eEEEEEecCCCceEEEEEeecc--------------c-------------hhhHhHHHHHHHHHHHHhcCCCCCeeEEec
Q 017021           58 QVLECWDRERKEMVAIKIVRGI--------------K-------------KYREAAMIEIEVLQQLAKHDKGGNRCVQIR  110 (379)
Q Consensus        58 ~V~~~~~~~~~~~vAiK~~~~~--------------~-------------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~  110 (379)
                      .||.|.. ..|+.+|+|+....              .             .......+|...|.++....   .+++..+
T Consensus         1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~G---v~vP~p~   76 (188)
T PF01163_consen    1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAG---VPVPKPY   76 (188)
T ss_dssp             EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT----SS--EE
T ss_pred             CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCC---ccCCcEE
Confidence            4888885 45779999998521              0             01234456888888875533   3455554


Q ss_pred             ceeeecceEEEEEeCCC--CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH-HHHcCCcccCCCCCcEEEecccccccC
Q 017021          111 NWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAF-MHDLCMIHTDLKPENVLLVSSEYIKVP  187 (379)
Q Consensus       111 ~~~~~~~~~~lv~e~~~--~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~-LH~~~iiH~dlkp~Nili~~~~~~~~~  187 (379)
                      .+.    .-++||||++  |.....+....   ++......++.+++..+.. +|+.|++|||+.+.||++.        
T Consensus        77 ~~~----~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~--------  141 (188)
T PF01163_consen   77 DYN----RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVD--------  141 (188)
T ss_dssp             EEE----TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEE--------
T ss_pred             EEe----CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEee--------
Confidence            332    2469999995  53333333321   2234556667777775555 5899999999999999993        


Q ss_pred             CCccCCCCCCCCcccccCCCCCCeEEeecCcccccC
Q 017021          188 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER  223 (379)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~  223 (379)
                                         .+ .+.++|||.+....
T Consensus       142 -------------------~~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  142 -------------------DG-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             -------------------TT-CEEE--GTTEEETT
T ss_pred             -------------------cc-eEEEEecCcceecC
Confidence                               22 79999999886543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK09902 hypothetical protein; Provisional

Probab=98.80  E-value=3.4e-07  Score=78.52  Aligned_cols=141  Identities=11%  Similarity=0.105  Sum_probs=102.6

Q ss_pred             ccccceeEEEEEecCCCceEEEEEeecc-------chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec--ceEEEE
Q 017021           52 GEGTFGQVLECWDRERKEMVAIKIVRGI-------KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--NHICIV  122 (379)
Q Consensus        52 g~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~--~~~~lv  122 (379)
                      |.||.+.|+.....  |+.+-+|.-.+.       ......+.+|...+.++.......|.++ +.+.-..+  -..+||
T Consensus        27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV  103 (216)
T PRK09902         27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV  103 (216)
T ss_pred             CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence            56999999997633  446888886521       2356788899999999988665444333 22222122  247899


Q ss_pred             EeCCC--CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          123 FEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       123 ~e~~~--~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +|-++  .+|.+++....-...+......++.+++.++.-||+.|+.|+|+.+.||+++..                   
T Consensus       104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~-------------------  164 (216)
T PRK09902        104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTE-------------------  164 (216)
T ss_pred             EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCC-------------------
Confidence            99884  699998866543345777778999999999999999999999999999999532                   


Q ss_pred             ccccCCCCCCeEEeecCccc
Q 017021          201 YFKRMPKSSAIKVIDFGSTT  220 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~  220 (379)
                            +...+.++||.-++
T Consensus       165 ------g~~~v~lIDlEk~r  178 (216)
T PRK09902        165 ------GKAEAGFLDLEKSR  178 (216)
T ss_pred             ------CCeeEEEEEhhccc
Confidence                  22358999997654

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.63  E-value=8e-07  Score=82.43  Aligned_cols=189  Identities=15%  Similarity=0.202  Sum_probs=117.2

Q ss_pred             hhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee-------eecceE
Q 017021           47 IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF-------DYRNHI  119 (379)
Q Consensus        47 i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~-------~~~~~~  119 (379)
                      ..+.||+|+-+.+|..-...  . -+.|++......-.  .+.+..+...    ..++-+..-..|=       ..+..+
T Consensus        15 ~gr~LgqGgea~ly~l~e~~--d-~VAKIYh~Pppa~~--aqk~a~la~~----p~~p~~~~rvaWPqa~L~G~~~~~~i   85 (637)
T COG4248          15 PGRPLGQGGEADLYTLGEVR--D-QVAKIYHAPPPAAQ--AQKVAELAAT----PDAPLLNYRVAWPQATLHGGRRGKVI   85 (637)
T ss_pred             CCccccCCccceeeecchhh--c-hhheeecCCCchHH--HHHHHHhccC----CCCcchhhhhcccHHHhhCCCcccee
Confidence            45789999999999874322  2 35688764322111  1112222221    1222221101110       112347


Q ss_pred             EEEEeCC-C-CCHHHHHHh----CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          120 CIVFEKL-G-SSLYDFLRK----NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       120 ~lv~e~~-~-~sL~~~l~~----~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      .++|+.. | ..+..+.+.    +......+..+++....++.+.+.||..|..-||++++|+|++.++           
T Consensus        86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~-----------  154 (637)
T COG4248          86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDS-----------  154 (637)
T ss_pred             EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCc-----------
Confidence            8889988 3 244444432    2222467889999999999999999999999999999999995544           


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCC--CCCcccccCCccchhhhh-----CCCCCCccchHhHHHHHHHHHhC-
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERP--DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTG-  265 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~~l~~g-  265 (379)
                                      .+.|.|-..--....  .-...+|..+|++||.-.     +-.-+...|.|.||+++++++.| 
T Consensus       155 ----------------~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~gg  218 (637)
T COG4248         155 ----------------KVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGG  218 (637)
T ss_pred             ----------------eEEEEcccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcC
Confidence                            344444321111111  112347889999999875     22345778999999999999875 


Q ss_pred             CCCCCC
Q 017021          266 EALFQT  271 (379)
Q Consensus       266 ~~pf~~  271 (379)
                      +.||.+
T Consensus       219 rHPysG  224 (637)
T COG4248         219 RHPYSG  224 (637)
T ss_pred             CCCCCc
Confidence            999976

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.57  E-value=9e-07  Score=77.00  Aligned_cols=113  Identities=26%  Similarity=0.295  Sum_probs=82.8

Q ss_pred             hHhHHHHHHHHHHHHhcCCCCCeeEEecceeee-cceEEEEEeCC-C-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Q 017021           83 REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-RNHICIVFEKL-G-SSLYDFLRKNNYRSFPIDLVREIARQLLECIA  159 (379)
Q Consensus        83 ~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~-~-~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~  159 (379)
                      ...+.+|...+..+......-|..+-+...-.. ....++|+|++ + .+|.+++....  ..+......++.+++..+.
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~--~~~~~~~~~ll~~l~~~i~  132 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE--QLDPSQRRELLRALARLIA  132 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc--ccchhhHHHHHHHHHHHHH
Confidence            456778999888887765444443333221111 13568999999 4 48999987743  2566778889999999999


Q ss_pred             HHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccc
Q 017021          160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY  221 (379)
Q Consensus       160 ~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~  221 (379)
                      -||..|++|+|+++.|||+...                        .....+.++||+-+..
T Consensus       133 ~lH~~gi~H~Dl~~~NILv~~~------------------------~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  133 KLHDAGIYHGDLNPSNILVDPD------------------------DGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHHHCcCCCCCCCcccEEEeCC------------------------CCceeEEEEcchhcee
Confidence            9999999999999999999543                        2345799999987653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.51  E-value=1.3e-06  Score=76.95  Aligned_cols=138  Identities=28%  Similarity=0.346  Sum_probs=95.9

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc-----------------------chhhHhHHHHHHHHHHHHh
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-----------------------KKYREAAMIEIEVLQQLAK   98 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-----------------------~~~~~~~~~e~~~l~~l~~   98 (379)
                      +.-+.|..+||-|-=+.||.|.+. .|.++|+|.=...                       ...+..+.+|.+.|+++..
T Consensus        90 ~~ve~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~  168 (304)
T COG0478          90 GIVEAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYP  168 (304)
T ss_pred             ChHHhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhh
Confidence            345668889999999999999976 5889999984310                       1123556678999988854


Q ss_pred             cCCCCCeeEEecceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEE
Q 017021           99 HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL  177 (379)
Q Consensus        99 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nil  177 (379)
                      ..   -.++.-+++    +...+|||+. |..|...-       +..+....++..|+.-+.-+-..|++|||+++=||+
T Consensus       169 ~G---~~VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIl  234 (304)
T COG0478         169 EG---VKVPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNIL  234 (304)
T ss_pred             cC---CCCCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEE
Confidence            32   123333322    4567899999 65554331       234455555566666666666899999999999999


Q ss_pred             EecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccc
Q 017021          178 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY  221 (379)
Q Consensus       178 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~  221 (379)
                      +                           +.++.+.++||-.+..
T Consensus       235 V---------------------------~~dg~~~vIDwPQ~v~  251 (304)
T COG0478         235 V---------------------------TEDGDIVVIDWPQAVP  251 (304)
T ss_pred             E---------------------------ecCCCEEEEeCccccc
Confidence            9                           5667789999977654

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.49  E-value=1.2e-06  Score=85.64  Aligned_cols=144  Identities=17%  Similarity=0.237  Sum_probs=94.8

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc-----------------------------------------hhhHhHH
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-----------------------------------------KYREAAM   87 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-----------------------------------------~~~~~~~   87 (379)
                      +.|+.++-|.||+|+.+. |+.||||+...+-                                         ..+-.+.
T Consensus       131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            678899999999999765 9999999975210                                         0112233


Q ss_pred             HHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-CCCHHHH--HHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 017021           88 IEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDF--LRKNNYRSFPIDLVREIARQLLECIAFMHDL  164 (379)
Q Consensus        88 ~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~--l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~  164 (379)
                      +|...+.++.....+.+.+..=.-+++..+.-.++|||+ |..+.++  +...+   .+.+.+.....++  .+..+=..
T Consensus       210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g---~d~k~ia~~~~~~--f~~q~~~d  284 (517)
T COG0661         210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG---IDRKELAELLVRA--FLRQLLRD  284 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcC---CCHHHHHHHHHHH--HHHHHHhc
Confidence            466666677666655554332222344455678999999 7777777  44433   5544443333322  13344458


Q ss_pred             CCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC
Q 017021          165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD  225 (379)
Q Consensus       165 ~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~  225 (379)
                      |+.|.|.+|.||++                           ..++.+.+.|||......+.
T Consensus       285 gffHaDpHpGNi~v---------------------------~~~g~i~~lDfGi~g~l~~~  318 (517)
T COG0661         285 GFFHADPHPGNILV---------------------------RSDGRIVLLDFGIVGRLDPK  318 (517)
T ss_pred             CccccCCCccceEE---------------------------ecCCcEEEEcCcceecCCHH
Confidence            99999999999999                           55677888888887665554

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.46  E-value=1.6e-06  Score=74.72  Aligned_cols=122  Identities=18%  Similarity=0.192  Sum_probs=68.0

Q ss_pred             hhhhccccccceeEEEEEecCCCceEEEEEeeccchhhH----------hHHHHHHHHHHHHhcCCCCC---eeEEecce
Q 017021           46 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE----------AAMIEIEVLQQLAKHDKGGN---RCVQIRNW  112 (379)
Q Consensus        46 ~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~----------~~~~e~~~l~~l~~~~~~~~---~i~~~~~~  112 (379)
                      ++.+.+-......|.+.  ...|+.+++|.........+          ...+.+.....+.......+   .++.....
T Consensus        34 ~~~kv~k~~~r~~ValI--ei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~  111 (229)
T PF06176_consen   34 KIIKVFKNTKRNYVALI--EIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKI  111 (229)
T ss_pred             eEEEeecCCCccEEEEE--EECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeee
Confidence            33333333333333333  34567788888753221111          11223343444433221111   22222333


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEe
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV  179 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~  179 (379)
                      +......+++|||+ |..|.+...      +++    .+.-.+.+++.-+|+.|+.|||++|.|+++.
T Consensus       112 ~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~  169 (229)
T PF06176_consen  112 FRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS  169 (229)
T ss_pred             ccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEE
Confidence            33345567999999 777766532      222    2334577789999999999999999999993

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.35  E-value=8.1e-06  Score=71.27  Aligned_cols=136  Identities=17%  Similarity=0.171  Sum_probs=90.5

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccch-------------------------hhHhHHHHHHHHHHHHhcCCCC
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-------------------------YREAAMIEIEVLQQLAKHDKGG  103 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------------------------~~~~~~~e~~~l~~l~~~~~~~  103 (379)
                      ..|++|-=+.||+|.. .++..+|+|++.....                         ......+|...|.++.....  
T Consensus        54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGV--  130 (268)
T COG1718          54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGV--  130 (268)
T ss_pred             eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCC--
Confidence            4677888889999974 5588999999963210                         11223457777777765432  


Q ss_pred             CeeEEecceeeecceEEEEEeCCCCCH--HHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEec
Q 017021          104 NRCVQIRNWFDYRNHICIVFEKLGSSL--YDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVS  180 (379)
Q Consensus       104 ~~i~~~~~~~~~~~~~~lv~e~~~~sL--~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~  180 (379)
                       .+++=+.+    ..-.+||||+|..-  .-.|..   -.+....+..+..+++..+.-|-. .|++|+||+.=|||+  
T Consensus       131 -rvP~Pi~~----~~nVLvMEfIg~~g~pAP~LkD---v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~--  200 (268)
T COG1718         131 -RVPEPIAF----RNNVLVMEFIGDDGLPAPRLKD---VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILV--  200 (268)
T ss_pred             -CCCCceee----cCCeEEEEeccCCCCCCCCccc---CCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEE--
Confidence             22222222    23469999995431  111111   123444678888889888888866 999999999999999  


Q ss_pred             ccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccC
Q 017021          181 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER  223 (379)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~  223 (379)
                                               . ++.+.+||+|.|....
T Consensus       201 -------------------------~-~~~p~iID~~QaV~~~  217 (268)
T COG1718         201 -------------------------H-DGEPYIIDVSQAVTID  217 (268)
T ss_pred             -------------------------E-CCeEEEEECccccccC
Confidence                                     3 5678999999986543

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.35  E-value=9.5e-06  Score=71.57  Aligned_cols=72  Identities=13%  Similarity=0.169  Sum_probs=51.9

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-C
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-G  127 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~  127 (379)
                      .+||+|..+.||+.    .+..+++|..... .......+|.+++..+....   ..+++.+.+.+..+..+++||++ |
T Consensus         7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~-~~~~~i~~E~~~l~~l~~~g---lpvP~~~~~~~~~~~~glv~e~i~G   78 (226)
T TIGR02172         7 TQTGEGGNGESYTH----KTGKWMLKLYNPG-FDKETIKREFDASRKVFSLG---IPTPHPFDLVEDGGRLGLIYELIVG   78 (226)
T ss_pred             eeecCCCCcceeEe----cCCCEEEEeCCCC-CCHHHHHHHHHHHHHHHHcC---CCCCceEEEEecCCeeeeeeeecCC
Confidence            57899999999984    2456889998642 23455678999999886533   23555666666677788999999 5


Q ss_pred             C
Q 017021          128 S  128 (379)
Q Consensus       128 ~  128 (379)
                      .
T Consensus        79 ~   79 (226)
T TIGR02172        79 K   79 (226)
T ss_pred             c
Confidence            4

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.24  E-value=1.7e-05  Score=70.04  Aligned_cols=78  Identities=21%  Similarity=0.254  Sum_probs=55.5

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee---eecceEEEEEeC
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF---DYRNHICIVFEK  125 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~---~~~~~~~lv~e~  125 (379)
                      +.|+.|..+.||++....  ..+++|..... ........|..++..+.....   .++.++...   ......+++|++
T Consensus         3 ~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~---pvP~~~~~~~~~~~~~~~~~~~~~   76 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGI---PVPRVLAFDTSDEFNGFPYLLMEY   76 (239)
T ss_dssp             EEEEESSSSEEEEEEETT--SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTS---BS--EEEEEEETEETSEEEEEEEE
T ss_pred             ccCCCCCeeeEEEEEECC--cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCC---CCceEEeecccccccccceEEEEE
Confidence            678999999999998655  47999998754 456677789999988876543   344554422   334568999999


Q ss_pred             C-CCCHHH
Q 017021          126 L-GSSLYD  132 (379)
Q Consensus       126 ~-~~sL~~  132 (379)
                      + |.++..
T Consensus        77 i~g~~~~~   84 (239)
T PF01636_consen   77 IPGRPLDD   84 (239)
T ss_dssp             ESSEEHHH
T ss_pred             eccccccc
Confidence            9 666666

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.22  E-value=5.2e-07  Score=87.67  Aligned_cols=245  Identities=16%  Similarity=0.100  Sum_probs=159.5

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCe-eEEecceeeecceEEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR-CVQIRNWFDYRNHICIV  122 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~-i~~~~~~~~~~~~~~lv  122 (379)
                      -|...+-+++|+++.+++.+...+...+ .+.+...    .....+++.|.++     ++|| .+..++.++.+...++.
T Consensus       243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~----l~~rl~~eLLdK~-----n~P~~~v~~~~d~~~E~~~~i~  312 (829)
T KOG0576|consen  243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT----LSRRLAIELLDKV-----NNPNPVVRYLEDYDGEDYLWIP  312 (829)
T ss_pred             chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc----hhhHHHHHHHHHc-----cCCCCcccccccCCcccccchh
Confidence            3445567799999999999876655544 7776643    3334478888888     6677 77778888888999999


Q ss_pred             EeCC-CC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          123 FEKL-GS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       123 ~e~~-~~-sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      ++++ ++ +....+.... ..+..-+...+...-..+|+++|+.-=+|+|    ||+..                     
T Consensus       313 ~~i~s~~rs~~~~~~~se-~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s---------------------  366 (829)
T KOG0576|consen  313 MRICSTGRSSALEMTVSE-IALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGS---------------------  366 (829)
T ss_pred             hhhhcCCccccccCChhh-HhhhhhhhhhhhhhhcccccccccccccCcc----ccccc---------------------
Confidence            9999 44 2222221111 1244445666667778889999988778887    77663                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCC--CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  278 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~  278 (379)
                             +...++.+|+........  .+...+|+.++|||+.....+....|.|++|.--.++.-|-+|-.++....  
T Consensus       367 -------~~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~~~~--  437 (829)
T KOG0576|consen  367 -------EEEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPPAVL--  437 (829)
T ss_pred             -------ccccccccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCCcccc--
Confidence                   244566666665544443  455678999999999999899999999999987667776766554311000  


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH-HHHhhccccCC
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT-HLLQGLLRYDP  357 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~li~~~L~~dP  357 (379)
                          -..|..|                           ..         +.+...  .   .++.... ++...|+..-|
T Consensus       438 ----~~~g~~p---------------------------~s---------~~L~~~--~---aw~~~~~~~~~~~~~~g~P  472 (829)
T KOG0576|consen  438 ----PMIGNGP---------------------------NS---------PMLTDK--S---AWSPVFHRDFPAPCLNGLP  472 (829)
T ss_pred             ----CCCCCCC---------------------------Cc---------cccchh--h---hcCcccccCCcccccCCCC
Confidence                0000000                           00         000000  0   0111112 47788999999


Q ss_pred             CCCcCHHHHhcCCCCCCCCcC
Q 017021          358 TDRLTAREALRHPFFTRDHLR  378 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f~~~~~~  378 (379)
                      ..|+.+..++.|.+|.+=.+|
T Consensus       473 ~~pkv~mgacfsKvfngCpl~  493 (829)
T KOG0576|consen  473 PTPKVHMGACFSKVFNGCPLR  493 (829)
T ss_pred             CCCcchhhHHHHHHhccCccc
Confidence            999999999999999876655

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.21  E-value=5.5e-05  Score=64.98  Aligned_cols=123  Identities=15%  Similarity=0.261  Sum_probs=92.3

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc-----------------hhhHhHHHHHHHHHHHH-hcCCCCCeeEEec
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-----------------KYREAAMIEIEVLQQLA-KHDKGGNRCVQIR  110 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-----------------~~~~~~~~e~~~l~~l~-~~~~~~~~i~~~~  110 (379)
                      ..||+|+.-.||.--  . +....||+.....                 .......+|+....++. .......++++++
T Consensus         7 ~~i~~G~~R~cy~HP--~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    7 DLIAQGGERDCYQHP--D-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             cccccCCCceEEECC--C-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            678999999999763  3 2336889886443                 23456677888888887 6666678899999


Q ss_pred             ceeeecceEEEEEeCC-------CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecc
Q 017021          111 NWFDYRNHICIVFEKL-------GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSS  181 (379)
Q Consensus       111 ~~~~~~~~~~lv~e~~-------~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~  181 (379)
                      ++.+++--..+|+|.+       ..+|.+++....   ++. .+...+.++   .++|-..+|+.+|++|.||++...
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~---~~~-~~~~~L~~f---~~~l~~~~Iv~~dl~~~NIv~~~~  154 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG---LTE-ELRQALDEF---KRYLLDHHIVIRDLNPHNIVVQRR  154 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC---ccH-HHHHHHHHH---HHHHHHcCCeecCCCcccEEEEec
Confidence            9999998899999976       247888885543   555 444444444   567789999999999999999654

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.00  E-value=8.3e-05  Score=66.42  Aligned_cols=77  Identities=14%  Similarity=0.086  Sum_probs=52.6

Q ss_pred             hccccccc-eeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-
Q 017021           49 SKMGEGTF-GQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-  126 (379)
Q Consensus        49 ~~Lg~G~~-g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-  126 (379)
                      ..|-.|.. +.||++...  +..+.+|+.....  ......|..++..+...    ..+++++.+...++..++||+++ 
T Consensus         4 ~~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~----~~vP~v~~~~~~~~~~~lv~e~i~   75 (244)
T cd05150           4 ERVTEGQSGATVYRLDGK--NPGLYLKIAPSGP--TYELEREAERLRWLAGK----LPVPEVIDYGSDDGRAWLLTSAVP   75 (244)
T ss_pred             eecCCCCCcCeEEEEcCC--CCcEEEEecCCCc--ccchHHHHHHHHHHHhc----CCCCeEEEEEecCCccEEEEEeeC
Confidence            34555655 788999643  4678999886432  33456789888888653    33666666666666789999999 


Q ss_pred             CCCHHHH
Q 017021          127 GSSLYDF  133 (379)
Q Consensus       127 ~~sL~~~  133 (379)
                      |.++.+.
T Consensus        76 G~~l~~~   82 (244)
T cd05150          76 GVPAAAL   82 (244)
T ss_pred             CccHhHh
Confidence            7666543

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.98  E-value=0.0001  Score=72.09  Aligned_cols=144  Identities=14%  Similarity=0.136  Sum_probs=89.6

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeecc--------------------------------ch------hhHhHHHHH
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--------------------------------KK------YREAAMIEI   90 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--------------------------------~~------~~~~~~~e~   90 (379)
                      +.||..+.|.||+|+.+. |+.||+|+-...                                +.      .+-.+.+|.
T Consensus       167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            688999999999999776 999999996421                                00      112223344


Q ss_pred             HHHHHHHhcCCCCC-----eeEEecceeeecceEEEEEeCC-CCCHH--HHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 017021           91 EVLQQLAKHDKGGN-----RCVQIRNWFDYRNHICIVFEKL-GSSLY--DFLRKNNYRSFPIDLVREIARQLLECIAFMH  162 (379)
Q Consensus        91 ~~l~~l~~~~~~~~-----~i~~~~~~~~~~~~~~lv~e~~-~~sL~--~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH  162 (379)
                      +...+..+...+..     .|++++..+  .....++|||+ |..+.  +.+++.+   ++...+..-+.+..  +.-+=
T Consensus       246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~~g---i~~~~i~~~l~~~~--~~qIf  318 (538)
T KOG1235|consen  246 KNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAIDKRG---ISPHDILNKLVEAY--LEQIF  318 (538)
T ss_pred             HhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHHHcC---CCHHHHHHHHHHHH--HHHHH
Confidence            44333333221111     244444333  44578999999 65444  4455544   66665544443332  23344


Q ss_pred             HcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccC
Q 017021          163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER  223 (379)
Q Consensus       163 ~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~  223 (379)
                      ..|++|+|-+|.||++..++                       ..+..+.+-|||+.....
T Consensus       319 ~~GffHaDPHPGNilv~~~~-----------------------~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  319 KTGFFHADPHPGNILVRPNP-----------------------EGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             hcCCccCCCCCCcEEEecCC-----------------------CCCccEEEEccccccccc
Confidence            78899999999999996543                       356788999999876433

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.89  E-value=7.6e-05  Score=63.71  Aligned_cols=125  Identities=18%  Similarity=0.228  Sum_probs=85.1

Q ss_pred             eeechhhhhhhhccccccc-eeEEEEEecCCCceEEEEEeec-----c----------c-------hhhHhHHHHHHHHH
Q 017021           38 IVFSAFADKIHSKMGEGTF-GQVLECWDRERKEMVAIKIVRG-----I----------K-------KYREAAMIEIEVLQ   94 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~-g~V~~~~~~~~~~~vAiK~~~~-----~----------~-------~~~~~~~~e~~~l~   94 (379)
                      +......++.++.||.|.- |.||+++  ..|+.+|||++..     .          .       .....+..|.....
T Consensus        32 F~~h~~~I~flefLg~g~~~~~V~kv~--I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfg  109 (207)
T PF13095_consen   32 FTHHGDDIEFLEFLGHGSHDGYVFKVE--IDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFG  109 (207)
T ss_pred             cCCCCCcEeeeeecCCCCceeEEEEEE--ECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhH
Confidence            3334567888899999999 9999996  4578999999421     0          0       12234556888888


Q ss_pred             HHHhcCCCCCeeEEecceeeec------------------ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 017021           95 QLAKHDKGGNRCVQIRNWFDYR------------------NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE  156 (379)
Q Consensus        95 ~l~~~~~~~~~i~~~~~~~~~~------------------~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~  156 (379)
                      ++......+..-+++++|..-.                  ....||.|+....-          .+....    +.+|..
T Consensus       110 RLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~~~----~~~~~~  175 (207)
T PF13095_consen  110 RLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQIRD----IPQMLR  175 (207)
T ss_pred             HHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccchhH----HHHHHH
Confidence            8876554333358888887311                  13567888772211          123333    345777


Q ss_pred             HHHHHHHcCCcccCCCCCcEEE
Q 017021          157 CIAFMHDLCMIHTDLKPENVLL  178 (379)
Q Consensus       157 aL~~LH~~~iiH~dlkp~Nili  178 (379)
                      -+..+|+.||+-+|+++.|..=
T Consensus       176 dl~~~~k~gI~~~Dv~~~ny~~  197 (207)
T PF13095_consen  176 DLKILHKLGIVPRDVKPRNYRG  197 (207)
T ss_pred             HHHHHHHCCeeeccCccccccC
Confidence            7889999999999999999874

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.86  E-value=0.00014  Score=75.85  Aligned_cols=199  Identities=23%  Similarity=0.302  Sum_probs=121.6

Q ss_pred             HHHHHHHHHhcCCCCCeeEEecceeeecce----EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017021           89 EIEVLQQLAKHDKGGNRCVQIRNWFDYRNH----ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD  163 (379)
Q Consensus        89 e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~----~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~  163 (379)
                      |+..+..+     .|.|++.++.+.-....    ..+..+++ +.++...+..-.  ..+....+.+..++..||.++|+
T Consensus       232 e~~~l~k~-----~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~--~i~~~~~r~~~~~~~~GL~~~h~  304 (1351)
T KOG1035|consen  232 ELESLSKI-----AHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG--SIPLETLRILHQKLLEGLAYLHS  304 (1351)
T ss_pred             HHHHHHhh-----ccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc--ccCHHHHHHHHHHHhhhHHHHHH
Confidence            44445555     55677766665543322    23445677 778888887765  68899999999999999999999


Q ss_pred             cCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEe--ecCcccccCCCCC--cccccCCccchh
Q 017021          164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI--DFGSTTYERPDQN--YIVSTRHYRAPE  239 (379)
Q Consensus       164 ~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Dfg~~~~~~~~~~--~~~gt~~y~aPE  239 (379)
                      ...       .++.+......                 ....++.+.....  ||+.+........  ...-+..+.+||
T Consensus       305 ~~l-------~~v~L~~s~~~-----------------~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e  360 (1351)
T KOG1035|consen  305 LSL-------EHVVLSASSSK-----------------ESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADE  360 (1351)
T ss_pred             hcc-------ceeEEeccccc-----------------ccccCccceeecchhhhcccccCCCcccchhhcCcccccccc
Confidence            833       34444221000                 0001333444444  6666654333321  122344567787


Q ss_pred             hhhCCCCC--CccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCc
Q 017021          240 VILGLGWT--YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAAS  317 (379)
Q Consensus       240 ~~~~~~~~--~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (379)
                      ......+.  ...|+|.+|.....+..|..+-......      ...+..                              
T Consensus       361 ~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~~------~~~l~~------------------------------  404 (1351)
T KOG1035|consen  361 DLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSAVP------VSLLDV------------------------------  404 (1351)
T ss_pred             ccccccchhhhhhHHHHHHHHHhhhhhcCcccccccch------hhhhcc------------------------------
Confidence            77665544  4479999999999888765433211100      000000                              


Q ss_pred             hhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          318 RESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                                            .......+.+.+|+.-++++|+++.+++.|||.+...
T Consensus       405 ----------------------~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~~  441 (1351)
T KOG1035|consen  405 ----------------------LSTSELLDALPKCLDEDSEERLSALELLTHPFLRFPT  441 (1351)
T ss_pred             ----------------------ccchhhhhhhhhhcchhhhhccchhhhhhchhccccc
Confidence                                  0111567788999999999999999999999987543

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.84  E-value=0.00031  Score=58.30  Aligned_cols=134  Identities=22%  Similarity=0.217  Sum_probs=88.0

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ..+.-++.+.|++|.+|.||++.++  |..+|+|+-. .+..+.....|.+++..+....    .-+.++.+-    ..+
T Consensus        20 ~~~~~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr-~ds~r~~l~kEakiLeil~g~~----~~p~vy~yg----~~~   88 (201)
T COG2112          20 GKYELRVEKELAKGTTSVVYLGEWR--GGEVALKVRR-RDSPRRNLEKEAKILEILAGEG----VTPEVYFYG----EDF   88 (201)
T ss_pred             cchhhhhhhhhhcccccEEEEeecc--CceEEEEEec-CCcchhhHHHHHHHHHHhhhcC----CCceEEEec----hhh
Confidence            3444567889999999999999765  4689999877 4555778888999988874432    122333222    233


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCC-CCcEEEecccccccCCCccCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLK-PENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlk-p~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      +.|||+ |.+|.+.....     +...    +..++.+---|-..||-|+.+. |...++                    
T Consensus        89 i~me~i~G~~L~~~~~~~-----~rk~----l~~vlE~a~~LD~~GI~H~El~~~~k~vl--------------------  139 (201)
T COG2112          89 IRMEYIDGRPLGKLEIGG-----DRKH----LLRVLEKAYKLDRLGIEHGELSRPWKNVL--------------------  139 (201)
T ss_pred             hhhhhhcCcchhhhhhcc-----cHHH----HHHHHHHHHHHHHhccchhhhcCCceeEE--------------------
Confidence            559999 76887765421     1222    2345555444567899999886 444444                    


Q ss_pred             CcccccCCCCCCeEEeecCcccc
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTY  221 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~  221 (379)
                             -.+..+.|+||.-|..
T Consensus       140 -------v~~~~~~iIDFd~At~  155 (201)
T COG2112         140 -------VNDRDVYIIDFDSATF  155 (201)
T ss_pred             -------ecCCcEEEEEccchhh
Confidence                   2334789999998863

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.82  E-value=0.0002  Score=63.55  Aligned_cols=73  Identities=14%  Similarity=0.086  Sum_probs=44.6

Q ss_pred             hccccccce-eEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhc-CCCCCeeEEecceeee---cceEEEEE
Q 017021           49 SKMGEGTFG-QVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKH-DKGGNRCVQIRNWFDY---RNHICIVF  123 (379)
Q Consensus        49 ~~Lg~G~~g-~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~-~~~~~~i~~~~~~~~~---~~~~~lv~  123 (379)
                      +.|+.||.. .||+..     ..+++|.... .........|..++..+... ...   ++..+...+.   ....|++|
T Consensus         3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~---vP~~~~~~~~~~~~~~~~~l~   73 (235)
T cd05155           3 EPVDSGGTDNATFRLG-----DDMSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLP---VPEPLGKGEPGEGYPWPWSVY   73 (235)
T ss_pred             eeccCCCcccceEEcC-----CceEEEcCCc-cchHHHHHHHHHHHHHHhccCCCC---CCceeecCCCccCCCcceEEE
Confidence            567877776 589762     3477887653 22345677899999888653 222   3333333222   23458899


Q ss_pred             eCC-CCCH
Q 017021          124 EKL-GSSL  130 (379)
Q Consensus       124 e~~-~~sL  130 (379)
                      +++ |.++
T Consensus        74 ~~i~G~~l   81 (235)
T cd05155          74 RWLEGETA   81 (235)
T ss_pred             EeecCCCC
Confidence            998 6554

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.60  E-value=0.0011  Score=61.39  Aligned_cols=139  Identities=20%  Similarity=0.248  Sum_probs=93.9

Q ss_pred             hhhhccccccceeEEEEEecCCCceEEEEEeecc--------------------------ch-hhHhHHHHHHHHHHHHh
Q 017021           46 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--------------------------KK-YREAAMIEIEVLQQLAK   98 (379)
Q Consensus        46 ~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--------------------------~~-~~~~~~~e~~~l~~l~~   98 (379)
                      .|..+|..|-=+.||.|. ..+|..+|||+++.+                          .+ ....+.+|+..|.++..
T Consensus       147 ~inGCiSTGKEANVYHat-~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~  225 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHAT-EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN  225 (520)
T ss_pred             ecccccccCccceeEeee-cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence            355788889999999998 566888999999621                          00 12334568888888866


Q ss_pred             cCCCCCeeEEecceeeecceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH-HHcCCcccCCCCCcEE
Q 017021           99 HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM-HDLCMIHTDLKPENVL  177 (379)
Q Consensus        99 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~L-H~~~iiH~dlkp~Nil  177 (379)
                      .....|--+-+       ....|||+++|.+=...-.- ....++...+..+-.+++.-+.-| |.+++||.||.-=|+|
T Consensus       226 aGIP~PePIlL-------k~hVLVM~FlGrdgw~aPkL-Kd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~L  297 (520)
T KOG2270|consen  226 AGIPCPEPILL-------KNHVLVMEFLGRDGWAAPKL-KDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLL  297 (520)
T ss_pred             cCCCCCCceee-------ecceEeeeeccCCCCcCccc-ccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhhe
Confidence            54333321111       33479999995331111001 112477777888888888777776 6889999999999999


Q ss_pred             EecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccc
Q 017021          178 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY  221 (379)
Q Consensus       178 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~  221 (379)
                      +                            -++.+.+||-+.+..
T Consensus       298 y----------------------------hdG~lyiIDVSQSVE  313 (520)
T KOG2270|consen  298 Y----------------------------HDGKLYIIDVSQSVE  313 (520)
T ss_pred             E----------------------------ECCEEEEEEcccccc
Confidence            9                            356789999988764

>PLN02876 acyl-CoA dehydrogenase

Probab=97.57  E-value=0.00085  Score=70.62  Aligned_cols=78  Identities=17%  Similarity=0.122  Sum_probs=51.5

Q ss_pred             hccccccceeEEEEEecCCC--ceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec---ceEEE
Q 017021           49 SKMGEGTFGQVLECWDRERK--EMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---NHICI  121 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~--~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~---~~~~l  121 (379)
                      +.++.|.++.+|+......+  ..+++|+.....  .......+|..++..+..+  ....+++.+.++.+.   +..|+
T Consensus        44 ~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~--~~vpVP~v~~~~~d~~v~G~~fl  121 (822)
T PLN02876         44 SQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEH--TDVPVPKVYCLCTDASVIGTAFY  121 (822)
T ss_pred             EEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhc--CCCCCCcEEEEecCCCcCCCceE
Confidence            67788999999998765432  467888765322  1234567899999888532  123356666665543   46889


Q ss_pred             EEeCC-CC
Q 017021          122 VFEKL-GS  128 (379)
Q Consensus       122 v~e~~-~~  128 (379)
                      |||++ |.
T Consensus       122 VME~v~G~  129 (822)
T PLN02876        122 IMEYLEGR  129 (822)
T ss_pred             EEEecCCc
Confidence            99999 43

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.54  E-value=0.0011  Score=58.79  Aligned_cols=74  Identities=15%  Similarity=0.317  Sum_probs=45.7

Q ss_pred             hccccccceeEEEEEecC-CCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-
Q 017021           49 SKMGEGTFGQVLECWDRE-RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-  126 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~-~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-  126 (379)
                      +.|..|-...+|++.... .++.|++|+.............|..++..+.....    .++++.... +   .++|||+ 
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl----~P~v~~~~~-~---~~l~e~i~   75 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGL----APKLYATFQ-N---GLIYEFIP   75 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCC----CCeEEEEeC-C---cEEEEeeC
Confidence            567778888999997543 35679999876432222333468888888765432    233333332 1   3799998 


Q ss_pred             CCCH
Q 017021          127 GSSL  130 (379)
Q Consensus       127 ~~sL  130 (379)
                      |.++
T Consensus        76 G~~l   79 (235)
T cd05157          76 GRTL   79 (235)
T ss_pred             CCcC
Confidence            6544

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.46  E-value=0.0033  Score=60.00  Aligned_cols=74  Identities=23%  Similarity=0.231  Sum_probs=50.4

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeec-----cc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRG-----IK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      +.||.|.+..||++.+...++.|+||.-..     .+   ....+...|.+.|..+.....  ..+++++.+.  ....+
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p--~~VPkV~~~D--~~~~~  107 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVP--DLVPKVYHYD--EELAV  107 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCC--CCCCeEEEEC--CCCCE
Confidence            678999999999999865446899998431     01   123455668888887754322  3466666553  35578


Q ss_pred             EEEeCC
Q 017021          121 IVFEKL  126 (379)
Q Consensus       121 lv~e~~  126 (379)
                      +|||++
T Consensus       108 lVME~L  113 (401)
T PRK09550        108 TVMEDL  113 (401)
T ss_pred             EEEecC
Confidence            999998

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.42  E-value=0.0013  Score=60.49  Aligned_cols=74  Identities=11%  Similarity=0.040  Sum_probs=47.7

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecc------eeeecceEEEE
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN------WFDYRNHICIV  122 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~------~~~~~~~~~lv  122 (379)
                      +.|..|....+|+...  .+..+++|+...  ........|..++..+......   ++..+.      +...++..+++
T Consensus        20 ~~i~~G~~n~~y~v~~--~~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~~---vp~~i~~~~g~~~~~~~~~~~~l   92 (296)
T cd05153          20 EGISAGIENTNYFVTT--DSGRYVLTLFEK--VSAEELPFFLALLDHLAERGLP---VPRPIADRDGEYLSELAGKPAAL   92 (296)
T ss_pred             ecccCccccceEEEEe--CCCcEEEEEcCC--CChHhccHHHHHHHHHHHCCCC---CCccccCCCCcEeeeeCCceEEE
Confidence            5677787789999863  345699999864  2345566788888888664322   333322      12334567899


Q ss_pred             EeCC-CCC
Q 017021          123 FEKL-GSS  129 (379)
Q Consensus       123 ~e~~-~~s  129 (379)
                      ++++ |..
T Consensus        93 ~~~i~G~~  100 (296)
T cd05153          93 VEFLAGEH  100 (296)
T ss_pred             EEeCCCCC
Confidence            9999 544

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.31  E-value=0.0023  Score=57.62  Aligned_cols=71  Identities=13%  Similarity=0.038  Sum_probs=43.4

Q ss_pred             ccccccceeEEEEEecCCCceEEEEEeeccchh-hHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-C
Q 017021           50 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-G  127 (379)
Q Consensus        50 ~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~  127 (379)
                      .+..|-.+.+|+..  .+++.+++|+....... ......|..++..+..... .|.++   ...  +  -++|+|++ |
T Consensus         3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~-~P~~i---~~~--~--~~~v~e~i~G   72 (256)
T TIGR02721         3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGL-APKPI---LVN--E--HWLLVEWLEG   72 (256)
T ss_pred             cCCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCC-CCceE---EEe--C--CEEEEEeccC
Confidence            45568888999986  44667899986533221 1234668888888865432 23332   222  1  26899998 5


Q ss_pred             CCH
Q 017021          128 SSL  130 (379)
Q Consensus       128 ~sL  130 (379)
                      ..+
T Consensus        73 ~~~   75 (256)
T TIGR02721        73 EVI   75 (256)
T ss_pred             ccc
Confidence            443

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK05231 homoserine kinase; Provisional

Probab=97.29  E-value=0.0079  Score=55.97  Aligned_cols=76  Identities=13%  Similarity=0.050  Sum_probs=44.5

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEec-c--eeeecceEEEEEeC
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR-N--WFDYRNHICIVFEK  125 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~-~--~~~~~~~~~lv~e~  125 (379)
                      +.|+.|....+|.....  +..+++|++..  ........|...+..+.......|.++... +  +....+..++++++
T Consensus        28 ~~l~~G~~n~~y~v~t~--~g~~vLK~~~~--~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~  103 (319)
T PRK05231         28 KGIAEGIENSNFFLTTT--QGEYVLTLFER--LTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTF  103 (319)
T ss_pred             chhccccccceEEEEeC--CCcEEEEEecc--CChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEe
Confidence            45677777899998643  34689998752  123344456677777755433333332211 1  12235668899999


Q ss_pred             C-CC
Q 017021          126 L-GS  128 (379)
Q Consensus       126 ~-~~  128 (379)
                      . |.
T Consensus       104 l~G~  107 (319)
T PRK05231        104 LEGK  107 (319)
T ss_pred             cCCC
Confidence            8 54

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=97.24  E-value=0.0014  Score=63.15  Aligned_cols=90  Identities=24%  Similarity=0.266  Sum_probs=61.1

Q ss_pred             CccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccc
Q 017021          248 YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL  327 (379)
Q Consensus       248 ~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (379)
                      +++||||+|.++.++.-|...+......+....+.++.-. +.+.....++.                            
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~-d~~~~~~a~e~----------------------------  160 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTD-DQELLSTAMEH----------------------------  160 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccC-chhHHHHHHHH----------------------------
Confidence            5999999999999999998777665665655555554321 11111111110                            


Q ss_pred             hhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          328 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                              ...-......+++..+|+-..|..||...++.+++-|++
T Consensus       161 --------~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~e  199 (725)
T KOG1093|consen  161 --------LIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTE  199 (725)
T ss_pred             --------HHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHH
Confidence                    111124456888999999999999999999999988764

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.11  E-value=0.014  Score=53.98  Aligned_cols=75  Identities=12%  Similarity=0.014  Sum_probs=44.0

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecc---eeeecceEEEEEeC
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN---WFDYRNHICIVFEK  125 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~---~~~~~~~~~lv~e~  125 (379)
                      +.++.|....+|++.. . +..+++|+..... .......|..++..+.......+.++...+   .....+..++++++
T Consensus        28 ~~~~~G~~n~~y~v~t-~-~~~~vLK~~~~~~-~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~  104 (307)
T TIGR00938        28 KGIAEGVENSNYLLTT-D-VGRYILTLYEKRV-KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEF  104 (307)
T ss_pred             cccCCccccceEEEEe-C-CCcEEEEEecCCC-CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEe
Confidence            5667777789999863 3 3468899875421 233445677777777554322222222111   11234667899999


Q ss_pred             C
Q 017021          126 L  126 (379)
Q Consensus       126 ~  126 (379)
                      +
T Consensus       105 i  105 (307)
T TIGR00938       105 L  105 (307)
T ss_pred             C
Confidence            8

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.05  E-value=0.0052  Score=56.70  Aligned_cols=74  Identities=15%  Similarity=0.128  Sum_probs=45.2

Q ss_pred             hccccccceeEEEEEecC------CCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           49 SKMGEGTFGQVLECWDRE------RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~------~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      +.|..|-...+|++....      +++.+++|+.............|..++..+.....    .++++..+..    .+|
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~----~P~~~~~~~~----~~v   75 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNL----GPKLYGIFPN----GRI   75 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCC----CCceEEEeCC----Cch
Confidence            345556677889887543      25789999976543333455678888888866442    2334433332    257


Q ss_pred             EeCC-CCCH
Q 017021          123 FEKL-GSSL  130 (379)
Q Consensus       123 ~e~~-~~sL  130 (379)
                      ++++ |..+
T Consensus        76 ~e~i~G~~l   84 (302)
T cd05156          76 EEFIPSRTL   84 (302)
T ss_pred             hheeCCCcC
Confidence            7887 5443

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=96.73  E-value=0.023  Score=53.21  Aligned_cols=82  Identities=20%  Similarity=0.182  Sum_probs=50.6

Q ss_pred             ccccccceeEEEEEecCCCceEEEEEee----c-c---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           50 KMGEGTFGQVLECWDRERKEMVAIKIVR----G-I---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        50 ~Lg~G~~g~V~~~~~~~~~~~vAiK~~~----~-~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .||.|....||++.+...++.|+||.-.    . .   .....+...|...|.......+  ..+++++.+  ++....+
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P--~~vP~vy~~--D~e~~~~   77 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVP--HLVPRIFHF--DTEMAVT   77 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCc--cccCeEEEE--cccccee
Confidence            5799999999999986544689999842    1 1   1223444567777776654332  245555433  3445568


Q ss_pred             EEeCC--CCCHHHHHH
Q 017021          122 VFEKL--GSSLYDFLR  135 (379)
Q Consensus       122 v~e~~--~~sL~~~l~  135 (379)
                      |||++  ...|...+-
T Consensus        78 vMEdL~~~~ilR~~Li   93 (370)
T TIGR01767        78 VMEDLSHHKIARKGLI   93 (370)
T ss_pred             hHhhCccchHHHHHHH
Confidence            89988  344545443

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=96.64  E-value=0.005  Score=56.20  Aligned_cols=125  Identities=18%  Similarity=0.250  Sum_probs=81.4

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeec----------c---------c----hhhHhHHHHHHHHHHHHh
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----------I---------K----KYREAAMIEIEVLQQLAK   98 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~----------~---------~----~~~~~~~~e~~~l~~l~~   98 (379)
                      +--+.+...||-|-=+.||.+-+.. |++.++|.=..          +         .    ..+..+.+|...+..+..
T Consensus        91 ~~v~svGnqIGVGKESDIY~v~d~~-G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e  169 (465)
T KOG2268|consen   91 GSVESVGNQIGVGKESDIYVVADEE-GNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYE  169 (465)
T ss_pred             chhhhhccccccccccceEEEecCC-CCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHH
Confidence            3355678899999999999998654 77888887321          0         0    123445567777777755


Q ss_pred             cCCCCCeeEEecceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEE
Q 017021           99 HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL  177 (379)
Q Consensus        99 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nil  177 (379)
                      +.-   .+++-++    .+..++|||+. |..|.+.-.-.     .   +..+...++.-+--|..+|+||||.+-=||+
T Consensus       170 ~gf---pVPkpiD----~~RH~Vvmelv~g~Pl~~v~~v~-----d---~~~ly~~lm~~Iv~la~~GlIHgDFNEFNim  234 (465)
T KOG2268|consen  170 RGF---PVPKPID----HNRHCVVMELVDGYPLRQVRHVE-----D---PPTLYDDLMGLIVRLANHGLIHGDFNEFNIM  234 (465)
T ss_pred             cCC---CCCCccc----ccceeeHHHhhcccceeeeeecC-----C---hHHHHHHHHHHHHHHHHcCceecccchheeE
Confidence            332   2333332    34568899999 77776553222     2   2233344555566788999999999999999


Q ss_pred             Eeccc
Q 017021          178 LVSSE  182 (379)
Q Consensus       178 i~~~~  182 (379)
                      +..++
T Consensus       235 v~dd~  239 (465)
T KOG2268|consen  235 VKDDD  239 (465)
T ss_pred             EecCC
Confidence            95433

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.56  E-value=0.017  Score=53.20  Aligned_cols=73  Identities=11%  Similarity=0.015  Sum_probs=41.0

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeec---cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc--eEEEEE
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN--HICIVF  123 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~--~~~lv~  123 (379)
                      +....|....+|...+.  ++.+++. ...   .........+|..++..+...   ...++..+..+.++.  ..|.||
T Consensus        31 ~~~~~G~sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~---~vP~p~~~~~~~~~~~g~pf~v~  104 (321)
T COG3173          31 EEISGGWSNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDV---DVPVPRAFGLCGEGYLGTPFYVM  104 (321)
T ss_pred             eeccCCcccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCC---CCCCcccccccccCCCCCceEEE
Confidence            33333444455665443  7788888 331   112223334466666665332   334566666666655  789999


Q ss_pred             eCC-C
Q 017021          124 EKL-G  127 (379)
Q Consensus       124 e~~-~  127 (379)
                      +++ |
T Consensus       105 ~~veG  109 (321)
T COG3173         105 EWVEG  109 (321)
T ss_pred             EEecc
Confidence            999 5

>PLN02236 choline kinase

Probab=96.49  E-value=0.031  Score=52.62  Aligned_cols=74  Identities=15%  Similarity=0.091  Sum_probs=43.4

Q ss_pred             hccccccceeEEEEEecC----CCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEe
Q 017021           49 SKMGEGTFGQVLECWDRE----RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  124 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~----~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e  124 (379)
                      +.|-.|-...+|++....    +++.|++|+.............|..++..+..... .|   ++++.+..+    .|.+
T Consensus        42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl-~P---~~~~~~~~g----~v~e  113 (344)
T PLN02236         42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQ-GP---RLLGRFPNG----RVEE  113 (344)
T ss_pred             EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCC-CC---ceEEEECCc----eEEE
Confidence            344457778899986432    34689999886433333333568888888866543 23   333444322    4677


Q ss_pred             CC-CCCH
Q 017021          125 KL-GSSL  130 (379)
Q Consensus       125 ~~-~~sL  130 (379)
                      |+ +.++
T Consensus       114 fi~g~~l  120 (344)
T PLN02236        114 FIHARTL  120 (344)
T ss_pred             eeCCCCC
Confidence            77 4443

>PRK12396 5-methylribose kinase; Reviewed

Probab=96.18  E-value=0.053  Score=51.50  Aligned_cols=83  Identities=24%  Similarity=0.312  Sum_probs=52.0

Q ss_pred             hhccccccceeEEEEEecCCCceEEEEEee----cc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           48 HSKMGEGTFGQVLECWDRERKEMVAIKIVR----GI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        48 ~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~----~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .+.||.|.-..||++.+...++.|+||.-.    ..   .....+...|.+.|.......++  .+++++.+  ++....
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~--~VP~vy~~--D~e~~~  109 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPG--LVPKVYLF--DSVMNC  109 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCC--cCCeEEEE--CcHHhh
Confidence            378899999999999985445679999842    11   12235556688888877664432  35555533  344456


Q ss_pred             EEEeCC--CCCHHHHH
Q 017021          121 IVFEKL--GSSLYDFL  134 (379)
Q Consensus       121 lv~e~~--~~sL~~~l  134 (379)
                      +|||++  ...|.+.+
T Consensus       110 ~vMEdL~~~~ilR~~L  125 (409)
T PRK12396        110 CVMEDLSDHTILRTAL  125 (409)
T ss_pred             HHHHhCcccHHHHHHH
Confidence            778887  23344443

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=96.11  E-value=0.062  Score=50.29  Aligned_cols=73  Identities=12%  Similarity=0.226  Sum_probs=42.0

Q ss_pred             hccccccceeEEEEEecCC---CceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeC
Q 017021           49 SKMGEGTFGQVLECWDRER---KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEK  125 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~  125 (379)
                      +.|..|-...+|++.....   +..|++|+..........-..|..++..+......    ++++.++. ++   +|.+|
T Consensus        20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~----P~~l~~~~-~G---~i~~f   91 (330)
T PLN02421         20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFG----AKLLGVFG-NG---MIQSF   91 (330)
T ss_pred             EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCC----CceeEEeC-Cc---Eeehh
Confidence            3444477778898865432   34789998764333333445688888888665432    33333342 22   46777


Q ss_pred             C-CCC
Q 017021          126 L-GSS  129 (379)
Q Consensus       126 ~-~~s  129 (379)
                      + +..
T Consensus        92 i~g~~   96 (330)
T PLN02421         92 INART   96 (330)
T ss_pred             hcCCC
Confidence            7 443

>PRK11768 serine/threonine protein kinase; Provisional

Probab=95.80  E-value=0.28  Score=45.75  Aligned_cols=71  Identities=14%  Similarity=0.054  Sum_probs=42.0

Q ss_pred             cceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecc--eeeecceEEEEEeCC
Q 017021           55 TFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN--WFDYRNHICIVFEKL  126 (379)
Q Consensus        55 ~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~--~~~~~~~~~lv~e~~  126 (379)
                      .-..||++.. .++..+++|+.............|+..+..+.......+.-+..-+  ....++..+.+++++
T Consensus        37 ~eN~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~  109 (325)
T PRK11768         37 YENRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRR  109 (325)
T ss_pred             ccceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeee
Confidence            3456888863 4456799998864333455666788888888664322111111111  223356778899988

>PRK10593 hypothetical protein; Provisional

Probab=95.72  E-value=0.093  Score=48.33  Aligned_cols=104  Identities=15%  Similarity=0.137  Sum_probs=70.7

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee---cceEEEEEeC
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY---RNHICIVFEK  125 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~---~~~~~lv~e~  125 (379)
                      +.||.|..+.||.....  +..+++|..+. ......+..|...+..+....  ...++++++.+..   .+..++|||+
T Consensus        20 ~~i~~G~~~~vy~~~~~--~~~~~~k~~~~-~~~~~~~~~Ea~~L~~L~~~~--~vpVP~V~~~~~~~~~~g~~~LVmE~   94 (297)
T PRK10593         20 ECISEQPYAALWALYDS--QGNPMPLMARS-FSTPGVAQQEAWKLSMLARSG--TVRMPTVYGVMTHEQSPGPDVLLLER   94 (297)
T ss_pred             eecCCccceeEEEEEcC--CCCEEEEEecc-cccchHHHHHHHHHHHHccCC--CCCcCcEEEEeccCCcCCCeEEEEec
Confidence            67899999999998632  23477787542 223456777999998885532  2346666665543   4678999999


Q ss_pred             C-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 017021          126 L-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL  164 (379)
Q Consensus       126 ~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~  164 (379)
                      + |.++.+.       .........+..+++.+|..||+.
T Consensus        95 i~G~~~~~~-------~~~~~~~~~l~~~l~~~La~LH~~  127 (297)
T PRK10593         95 LRGVSVEAP-------ARTPERWEQLKDQIVEGLLAWHRI  127 (297)
T ss_pred             cCCEecCCC-------CCCHHHHHHHHHHHHHHHHHHhCC
Confidence            9 7666541       123444556667888999999975

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=95.61  E-value=0.04  Score=47.02  Aligned_cols=84  Identities=24%  Similarity=0.229  Sum_probs=59.3

Q ss_pred             HHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-CCCHHHH---HHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-
Q 017021           89 EIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDF---LRKNNYRSFPIDLVREIARQLLECIAFMHD-  163 (379)
Q Consensus        89 e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~---l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-  163 (379)
                      |.-+++.+..    ..+++++++++   ++ +++.||. .+++...   +....  ..++.....++.+++..+.+++. 
T Consensus         9 E~lll~~l~~----~~~~pk~lG~C---G~-~~v~E~~~~~~~~~~~~~l~~~~--~~~w~~R~~iA~~lL~~l~~l~~~   78 (188)
T PF12260_consen    9 EPLLLQLLQG----SEPFPKLLGSC---GR-FYVVEYVGAGSLYGIYRPLSQFL--QSPWEQRAKIALQLLELLEELDHG   78 (188)
T ss_pred             HHHHHHHcCC----CCCCCCeeeEC---CC-EEEEEeecCcccccccccccccc--ccCHHHHHHHHHHHHHHHHHHhcC
Confidence            6666666632    24789999888   32 4688998 4554321   11111  36789999999999999999986 


Q ss_pred             --cCCcccCCCCCcEEEeccc
Q 017021          164 --LCMIHTDLKPENVLLVSSE  182 (379)
Q Consensus       164 --~~iiH~dlkp~Nili~~~~  182 (379)
                        ..+.-.|++|+|+-+..++
T Consensus        79 ~~~~~~lcDv~~~nfgv~~~~   99 (188)
T PF12260_consen   79 PLGFFYLCDVSPDNFGVNDDG   99 (188)
T ss_pred             CCCcEEEeecchHHeEEeCCC
Confidence              3477889999999995443

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=95.59  E-value=0.087  Score=47.94  Aligned_cols=45  Identities=27%  Similarity=0.150  Sum_probs=28.1

Q ss_pred             cccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhc
Q 017021           53 EGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKH   99 (379)
Q Consensus        53 ~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~   99 (379)
                      +|-...|+.+. ...|+.+++|.-.. ........+|..++..+...
T Consensus        21 ~g~~~~v~~i~-~~~g~~~VlR~p~~-~~~~~~l~rE~~vL~~L~~~   65 (276)
T cd05152          21 SGLDFQVVFAK-DTDGVPWVLRIPRR-PDVSERAAAEKRVLALVRKH   65 (276)
T ss_pred             CcceeEEEEEE-cCCCCeEEEEecCC-HHHHHHHHHHHHHHHHHHhc
Confidence            33344555553 34477888888753 22345567899999988653

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PLN02756 S-methyl-5-thioribose kinase

Probab=95.55  E-value=0.16  Score=48.55  Aligned_cols=73  Identities=15%  Similarity=0.114  Sum_probs=47.2

Q ss_pred             hhccccccceeEEEEEecCCCceEEEEEee-----ccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           48 HSKMGEGTFGQVLECWDRERKEMVAIKIVR-----GIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        48 ~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~-----~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .+.||.|....||++.+.  ++.++||+-.     ...   ....+...|...|..+....  ..++++++.+.+  +..
T Consensus        37 ~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~--p~~VPkVy~~de--d~~  110 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLC--PDHVPEVYHFDR--TMA  110 (418)
T ss_pred             EEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcC--CCCCCeEEEECC--CCC
Confidence            378899999999999863  4568999854     111   12334445666666654322  135777776665  446


Q ss_pred             EEEEeCC
Q 017021          120 CIVFEKL  126 (379)
Q Consensus       120 ~lv~e~~  126 (379)
                      +++||++
T Consensus       111 vlvME~L  117 (418)
T PLN02756        111 LIGMRYL  117 (418)
T ss_pred             EEEEeec
Confidence            7789999

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=95.20  E-value=0.0042  Score=67.06  Aligned_cols=141  Identities=13%  Similarity=-0.001  Sum_probs=97.5

Q ss_pred             CCeeEEecceeee--cceEEEEEeCC-CCCHHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHHHHcC-----CcccCCC
Q 017021          103 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYR--SFPIDLVREIARQLLECIAFMHDLC-----MIHTDLK  172 (379)
Q Consensus       103 ~~~i~~~~~~~~~--~~~~~lv~e~~-~~sL~~~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~-----iiH~dlk  172 (379)
                      |+++.....-...  ...-+..++++ +|.+.+++-+.-.+  .+...-+...-.+.+.+..-+|+..     .+|+++|
T Consensus      1288 h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lk 1367 (2724)
T KOG1826|consen 1288 HYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLK 1367 (2724)
T ss_pred             ceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhh
Confidence            3444444333332  23467889999 99999998664322  2333334333333377777777532     6999999


Q ss_pred             CCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCc
Q 017021          173 PENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYP  249 (379)
Q Consensus       173 p~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~  249 (379)
                      +.|.++                           ..+..+++.++|+.+..++..   ....+++.|+.|++.....++.+
T Consensus      1368 f~lpmI---------------------------Vtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~r 1420 (2724)
T KOG1826|consen 1368 FTLPMI---------------------------VTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKR 1420 (2724)
T ss_pred             hhccce---------------------------ecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhH
Confidence            999999                           566777888888887444443   22356778899999988889988


Q ss_pred             cchHhHHHHHHHHHhCCCCCC
Q 017021          250 CDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       250 sDvwSlG~il~~l~~g~~pf~  270 (379)
                      +|+|..|+-+|....|..+|.
T Consensus      1421 sdilr~s~~ly~rs~~n~~fi 1441 (2724)
T KOG1826|consen 1421 SDILRRSLSLYLRSDGNAYFI 1441 (2724)
T ss_pred             HHHHHHHHHHHHHhcccHHHH
Confidence            999999999999888877663

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=94.83  E-value=0.12  Score=47.24  Aligned_cols=72  Identities=18%  Similarity=0.217  Sum_probs=47.6

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  126 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~  126 (379)
                      +.++.|.-..+|+..  .+++.+.+|+-.  ......+..|..-|..+...  ....+++.+.+....+..|+++|+.
T Consensus        23 ~~v~GG~i~~a~~~~--~~~~~~FvK~~~--~~~~~~f~~Ea~gL~~L~~~--~~~~vP~vi~~G~~~~~~fLlle~l   94 (288)
T PF03881_consen   23 EPVSGGDINEAYRLD--TDGGSYFVKVNS--ESGRDMFEGEAEGLKALAEA--NPIRVPKVIAWGEYDDDAFLLLEFL   94 (288)
T ss_dssp             EEE--SSSSEEEEEE--TTS-EEEEEEEE--GGGCCHHHHHHHHHHHHCHT--TTSBS--EEEEEE-SSCCEEEEE--
T ss_pred             EecCCCChhheEEEE--CCCccEEEEecC--hhhHHHHHHHHHHHHHHHhc--CCCCCCeEEEEEeecCCceEEEEee
Confidence            567878889999986  667889999876  33345566788888888543  2345777777777777779999998

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PRK06148 hypothetical protein; Provisional

Probab=94.69  E-value=0.63  Score=50.37  Aligned_cols=81  Identities=15%  Similarity=0.094  Sum_probs=45.3

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcC--CCCCeeEEec-ce----eee-cc--e
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD--KGGNRCVQIR-NW----FDY-RN--H  118 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~--~~~~~i~~~~-~~----~~~-~~--~  118 (379)
                      +.|+ |..-.+|++.. .+|..+++|+.+... .......|...+..+....  ...|.++... +-    ... ++  +
T Consensus        31 ~~L~-s~~d~nf~v~~-~~g~~yVLKi~~~~~-~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~  107 (1013)
T PRK06148         31 TPLD-GERDLNFRLTT-DDGADYILKIVNPSE-PRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPR  107 (1013)
T ss_pred             eecC-CcCCceEEEEe-CCCCeEEEEEcCCcc-chhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceE
Confidence            4564 45677888863 456679999997532 2334444666777665542  2223333222 11    111 12  5


Q ss_pred             EEEEEeCC-CCCHHH
Q 017021          119 ICIVFEKL-GSSLYD  132 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~  132 (379)
                      .+.+++|. |..+.+
T Consensus       108 ~vrLl~~l~G~~l~~  122 (1013)
T PRK06148        108 LLRLLSWLPGTPLAE  122 (1013)
T ss_pred             EEEEEeccCCCcHHh
Confidence            77889999 655554

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=94.64  E-value=0.21  Score=43.47  Aligned_cols=108  Identities=13%  Similarity=0.187  Sum_probs=61.7

Q ss_pred             cccceeEEEEEecCCCceEEEEEeeccc-h-hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-CCC
Q 017021           53 EGTFGQVLECWDRERKEMVAIKIVRGIK-K-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSS  129 (379)
Q Consensus        53 ~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~-~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~s  129 (379)
                      -|+.++.-.+..+. |. ..+|++...+ . ...-+..+..+++++       ..++++..  +.+-.+.++.|.| ...
T Consensus        72 ~~gNsTl~~~kt~i-G~-L~lKKi~slp~~~~~~~y~nky~v~Arm-------hGilrL~N--Dn~~~yGvIlE~Cy~~~  140 (308)
T PF07387_consen   72 FNGNSTLLIGKTKI-GP-LFLKKIRSLPCCINDALYFNKYRVFARM-------HGILRLKN--DNNYKYGVILERCYKIK  140 (308)
T ss_pred             cCCceEEEEecccc-ch-hhhhhccCCCcccchhhhhhhhhHHHHh-------hheeEeec--CCCceeEEEEeeccCcc
Confidence            35666666665333 43 4556554322 2 234445677888777       33666662  2344577999998 332


Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH--HcCCcccCCCCCcEEEeccccccc
Q 017021          130 LYDFLRKNNYRSFPIDLVREIARQLLECIAFMH--DLCMIHTDLKPENVLLVSSEYIKV  186 (379)
Q Consensus       130 L~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH--~~~iiH~dlkp~Nili~~~~~~~~  186 (379)
                      .           .+.    .++.-=+.+|.-.|  +.+.+|||..|+|||.+..|.+|+
T Consensus       141 i-----------~~~----N~i~agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKl  184 (308)
T PF07387_consen  141 I-----------NFS----NFITAGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKL  184 (308)
T ss_pred             c-----------chh----HHHHHhHHHHHHhhccCCCeecCCCChhheeecCCCCEEe
Confidence            1           001    01111145677788  356999999999999944444333

The function of this family is unknown.

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=94.61  E-value=0.13  Score=47.24  Aligned_cols=75  Identities=11%  Similarity=-0.071  Sum_probs=44.1

Q ss_pred             ccccceeEEEEEecC----C----CceEEEEEeeccch------hhHhHHHHHHHHHHHHhcC--------CCCCeeEEe
Q 017021           52 GEGTFGQVLECWDRE----R----KEMVAIKIVRGIKK------YREAAMIEIEVLQQLAKHD--------KGGNRCVQI  109 (379)
Q Consensus        52 g~G~~g~V~~~~~~~----~----~~~vAiK~~~~~~~------~~~~~~~e~~~l~~l~~~~--------~~~~~i~~~  109 (379)
                      |.|-.|.+|++.-..    +    ...+.+|....+..      ....+.+|+.....+....        ......+++
T Consensus         2 Gd~y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~~   81 (294)
T PF02958_consen    2 GDNYLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSRREFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFPKC   81 (294)
T ss_pred             CCcceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeeceE
Confidence            778888898876533    2    24588888762221      1234456777666553211        112345666


Q ss_pred             cceeeecceEEEEEeCC
Q 017021          110 RNWFDYRNHICIVFEKL  126 (379)
Q Consensus       110 ~~~~~~~~~~~lv~e~~  126 (379)
                      +.....+...+||||.+
T Consensus        82 ~~~~~~~~~~~lvlEDL   98 (294)
T PF02958_consen   82 YYADEDPGDEVLVLEDL   98 (294)
T ss_pred             EEeccCCCceeeehhhh
Confidence            66665555678888876

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=94.51  E-value=0.58  Score=43.64  Aligned_cols=78  Identities=18%  Similarity=0.112  Sum_probs=47.4

Q ss_pred             ccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCC-eeEEecce--eeecc--eEEEEEe
Q 017021           50 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNW--FDYRN--HICIVFE  124 (379)
Q Consensus        50 ~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~-~i~~~~~~--~~~~~--~~~lv~e  124 (379)
                      .|.+ .-..+|+.... .|+ +++|+.... ........|+..++.+.......+ .+...-+-  ..-.+  +.+-+++
T Consensus        33 ~l~s-~eN~~f~~~~~-~g~-~iLki~~~~-~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~  108 (331)
T COG2334          33 GLNS-EENSNFRVQTE-DGR-YILKIYRPG-WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFE  108 (331)
T ss_pred             cccc-ccCceEEEEec-CCC-eEEEEecCC-CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEE
Confidence            3444 44568888643 344 499999865 566777789999998877553221 12222221  11234  7888999


Q ss_pred             CC-CCCHH
Q 017021          125 KL-GSSLY  131 (379)
Q Consensus       125 ~~-~~sL~  131 (379)
                      ++ |..+.
T Consensus       109 ~l~G~~~~  116 (331)
T COG2334         109 YLPGRPLE  116 (331)
T ss_pred             ecCCcCcC
Confidence            99 55554

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=94.42  E-value=0.11  Score=45.07  Aligned_cols=33  Identities=18%  Similarity=0.036  Sum_probs=23.5

Q ss_pred             CceEEEEEeeccchhhHhHHHHHHHHHHHHhcC
Q 017021           68 KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD  100 (379)
Q Consensus        68 ~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~  100 (379)
                      ++.|++++.......-..-..|..++..+....
T Consensus         2 ~~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~g   34 (211)
T PF01633_consen    2 PEKYLVRIPGEGTENFIDRENENEALKLLSEAG   34 (211)
T ss_dssp             TSEEEEEEEESCGCSHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEEeCCCCcccccCHHHHHHHHHHHHHcC
Confidence            467899998765455556667888888886644

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=94.06  E-value=0.064  Score=49.51  Aligned_cols=97  Identities=16%  Similarity=0.139  Sum_probs=54.1

Q ss_pred             EEEEEeCCCCCHHHHH---HhCCCCCCCHHHHHHHHHHHHHHHHHHH------HcCCcccCCCCCcEEEecccccccCCC
Q 017021          119 ICIVFEKLGSSLYDFL---RKNNYRSFPIDLVREIARQLLECIAFMH------DLCMIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       119 ~~lv~e~~~~sL~~~l---~~~~~~~l~~~~~~~~~~qi~~aL~~LH------~~~iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                      ..+|++++.++...+-   ....+-.--.+.++.++.|++  |-|+-      ....+|-||||+|||+.++.......+
T Consensus       246 nIIIfPLA~~Sadkv~~~~~~e~GF~s~~~YvkfifLQia--LLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~  323 (434)
T PF05445_consen  246 NIIIFPLARCSADKVTESNAAELGFKSNVEYVKFIFLQIA--LLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKF  323 (434)
T ss_pred             cEEEEehhhcchhhcCHHHHHhcCchhHHHHHHHHHHHHH--HHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEE
Confidence            4588998844433332   222211233467778888885  44422      345899999999999965433222222


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ  226 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~  226 (379)
                      +-...         .=.+.-.++|.||.++...+-..
T Consensus       324 ~~~~~---------vF~Epi~~~LnDFDfSqv~~i~N  351 (434)
T PF05445_consen  324 GNRNY---------VFKEPIRCCLNDFDFSQVANIIN  351 (434)
T ss_pred             CCeEE---------EecccceeeecccCHHHhcccch
Confidence            11000         00234557889999887655443

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=93.56  E-value=0.28  Score=45.84  Aligned_cols=105  Identities=13%  Similarity=0.247  Sum_probs=67.2

Q ss_pred             cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      ..+.|++|++.|+++.-.-      .-..+++..++.+.+.-+.-+.+ -..=|||+.-+||++                
T Consensus       298 ~~y~yl~~kdhgt~is~ik------~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLI----------------  355 (488)
T COG5072         298 TLYLYLHFKDHGTPISIIK------ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILI----------------  355 (488)
T ss_pred             ceEEEEEEecCCceeeeee------cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceee----------------
Confidence            4567899999988875332      23467888888887776666653 458899999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHH
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC  257 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~  257 (379)
                                 + ++.+.||||.+++....+..  ..-..+--|-.+.|.. +.+-+||-+--
T Consensus       356 -----------d-~GnvtLIDfklsRl~~~q~~--isy~rldhp~lF~G~d-d~QFeIYrlMr  403 (488)
T COG5072         356 -----------D-EGNVTLIDFKLSRLSYSQGI--ISYNRLDHPDLFNGVD-DYQFEIYRLMR  403 (488)
T ss_pred             -----------e-cCceEEEEeeeeecccCCce--eeccccCchhhhcCcc-ceeeeHHHHHH
Confidence                       4 66788888888773322221  1111223455555433 55666666443

>PHA03111 Ser/Thr kinase; Provisional

Probab=93.30  E-value=0.13  Score=47.33  Aligned_cols=98  Identities=16%  Similarity=0.096  Sum_probs=53.3

Q ss_pred             eEEEEEeCCCCCHHHHH----HhCCCCCCCHHHHHHHHHHHHHHHHHH-H---HcCCcccCCCCCcEEEecccccccCCC
Q 017021          118 HICIVFEKLGSSLYDFL----RKNNYRSFPIDLVREIARQLLECIAFM-H---DLCMIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       118 ~~~lv~e~~~~sL~~~l----~~~~~~~l~~~~~~~~~~qi~~aL~~L-H---~~~iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                      -..+|++++.++...+-    ...+ -.--.+.++.++.||+.-.-.+ .   ....+|-||||+|||+..+.......+
T Consensus       249 GnIIIfPLArcSadkv~~~~~~e~G-F~s~~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~  327 (444)
T PHA03111        249 GNIIIFPLARCSADKVTEENAAELG-FKSLVEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSDEPISITL  327 (444)
T ss_pred             CcEEEEehhhcccccCCHHHHHHcC-CccHHHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCCCcEEEEE
Confidence            35688888743332221    1222 1223567788888886533223 1   345899999999999965432111111


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD  225 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~  225 (379)
                      +-...      .   =.+.-.++|.||.++...+-.
T Consensus       328 ~~~~~------v---F~Epi~~~LnDFDfSqv~~i~  354 (444)
T PHA03111        328 KDATY------V---FNEPIKACLNDFDFSQVANII  354 (444)
T ss_pred             CCeEE------E---eccchhhhhcccCHHHHccch
Confidence            10000      0   023455788888888765544

>PTZ00384 choline kinase; Provisional

Probab=92.18  E-value=1.3  Score=42.22  Aligned_cols=73  Identities=18%  Similarity=0.169  Sum_probs=39.6

Q ss_pred             hccccccceeEEEEEecCCC------ceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           49 SKMGEGTFGQVLECWDRERK------EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~------~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      +.|..|-...+|++......      +.|.+++.......-..-..|..++..+....    .-+++++.+..    +++
T Consensus        56 ~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~g----lgP~l~~~f~~----g~l  127 (383)
T PTZ00384         56 KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNN----FGPKIIGRFGD----FTI  127 (383)
T ss_pred             EEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCC----CCCeEEEecCC----EEE
Confidence            34555778889998644321      22555554322222233345788888875543    23444444432    478


Q ss_pred             EeCC-CCC
Q 017021          123 FEKL-GSS  129 (379)
Q Consensus       123 ~e~~-~~s  129 (379)
                      .||+ |.+
T Consensus       128 ~efIeGr~  135 (383)
T PTZ00384        128 QEWVEGNT  135 (383)
T ss_pred             EEEecccc
Confidence            8888 544

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=91.98  E-value=0.98  Score=43.04  Aligned_cols=59  Identities=27%  Similarity=0.369  Sum_probs=40.3

Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH-HHcCCcccCCCCCcEEEec
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM-HDLCMIHTDLKPENVLLVS  180 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~L-H~~~iiH~dlkp~Nili~~  180 (379)
                      ..++-+|. |.++..+++...   .++.....++.-.+.|+--+ --.+++|.|++|.||++.-
T Consensus       320 ~vl~E~~~~Gl~v~~~v~~~~---~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf  380 (565)
T KOG1236|consen  320 LVLVETYERGLSVLRFVKWKS---QPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRF  380 (565)
T ss_pred             ceeeeeccccccHHhhhhccc---ChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEe
Confidence            34555666 888888887654   55555555555455555443 3567999999999999964

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	379
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		1e-84
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		6e-79
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		7e-78
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		9e-78
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		1e-77
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		1e-77
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		3e-64
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		3e-47
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		4e-47
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		1e-46
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		9e-46
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		1e-45
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		2e-45
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		2e-40
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		3e-40
2x7g_A	389	Structure Of Human Serine-Arginine-Rich Protein-Spe		1e-39
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		4e-36
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		5e-36
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		1e-27
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-27
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-27
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		5e-27
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		6e-27
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-27
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		9e-27
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		1e-26
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		1e-26
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-26
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		2e-26
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		2e-26
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-26
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		2e-26
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		2e-26
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-26
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		2e-26
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		2e-26
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		2e-26
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-26
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-26
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-26
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-26
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-26
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-26
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		2e-26
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		2e-26
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-26
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-26
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-26
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-26
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		3e-26
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		4e-26
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-26
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		7e-26
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		2e-25
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		6e-25
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		1e-24
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		2e-24
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		3e-24
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		4e-24
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		4e-24
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		8e-24
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-22
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-22
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-22
4exu_A	371	Mapk13, Inactive Form Length = 371		7e-22
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		8e-22
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		8e-22
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		1e-21
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		1e-21
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		2e-21
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-21
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		2e-21
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		2e-21
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		2e-21
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		2e-21
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		3e-21
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		3e-21
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		3e-21
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		3e-21
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		3e-21
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		3e-21
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		3e-21
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		3e-21
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-21
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		3e-21
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		3e-21
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		3e-21
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		3e-21
2oza_B	366	Structure Of P38alpha Complex Length = 366		4e-21
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		4e-21
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		4e-21
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		4e-21
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		4e-21
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		4e-21
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		4e-21
3hec_A	348	P38 In Complex With Imatinib Length = 348		4e-21
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		4e-21
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		5e-21
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		5e-21
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		5e-21
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		5e-21
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		5e-21
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		5e-21
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		5e-21
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		5e-21
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		5e-21
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		5e-21
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		5e-21
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		5e-21
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		5e-21
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		6e-21
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		6e-21
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		6e-21
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		6e-21
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		6e-21
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		6e-21
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		6e-21
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		6e-21
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		6e-21
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		6e-21
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		6e-21
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		6e-21
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		6e-21
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		6e-21
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		6e-21
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		6e-21
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		6e-21
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		7e-21
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		7e-21
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		7e-21
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		7e-21
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		7e-21
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		7e-21
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		7e-21
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		7e-21
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		7e-21
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		1e-20
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		1e-20
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		1e-20
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-20
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		2e-20
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		2e-20
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		2e-20
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		2e-20
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		3e-20
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		3e-20
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		3e-20
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		3e-20
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		3e-20
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		3e-20
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		3e-20
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		3e-20
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		3e-20
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		4e-20
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		5e-20
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		5e-20
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		5e-20
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		5e-20
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		5e-20
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		7e-20
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		7e-20
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		9e-20
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		9e-20
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		1e-19
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		1e-19
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-19
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-19
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		1e-19
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		1e-19
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		1e-19
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		1e-19
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		1e-19
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		1e-19
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		2e-19
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		2e-19
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		2e-19
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		2e-19
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		2e-19
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		2e-19
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		2e-19
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		3e-19
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		3e-19
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		3e-19
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		4e-19
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		6e-19
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		6e-19
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-18
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-18
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-18
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-18
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		2e-18
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-18
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		2e-18
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		3e-18
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		4e-18
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		6e-18
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		6e-18
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		7e-18
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		7e-18
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		7e-18
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		8e-18
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-17
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		3e-17
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		3e-17
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-17
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		5e-17
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		5e-17
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		6e-17
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		7e-17
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		7e-17
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		9e-17
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		1e-16
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		1e-16
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		1e-16
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		1e-16
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		1e-16
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-16
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-16
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		2e-16
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		3e-16
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		3e-16
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		3e-16
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		5e-16
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		5e-16
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		5e-16
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		5e-16
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		5e-16
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		5e-16
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		5e-16
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		5e-16
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		6e-16
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		6e-16
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		6e-16
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		6e-16
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		7e-16
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		9e-16
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		1e-15
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		1e-15
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		1e-15
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		1e-15
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		1e-15
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		1e-15
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		1e-15
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		1e-15
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		1e-15
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		1e-15
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		1e-15
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		1e-15
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		1e-15
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		1e-15
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		2e-15
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		2e-15
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		2e-15
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-15
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		2e-15
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		2e-15
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-15
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		3e-15
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		3e-15
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		3e-15
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		4e-15
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		4e-15
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		7e-15
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		1e-14
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		1e-14
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		1e-14
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		2e-14
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		2e-14
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		2e-14
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		2e-14
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		3e-14
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		3e-14
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		3e-14
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		3e-14
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		3e-14
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		3e-14
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		6e-14
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		7e-14
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		8e-14
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		9e-14
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		2e-13
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		2e-13
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		3e-13
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		3e-13
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		4e-13
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		4e-13
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		1e-12
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		1e-12
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		1e-12
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-12
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		1e-12
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		1e-12
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		1e-12
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-12
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-12
2oza_A	356	Structure Of P38alpha Complex Length = 356		1e-12
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		1e-12
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		1e-12
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		1e-12
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		1e-12
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		2e-12
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		2e-12
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		2e-12
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-12
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-12
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		2e-12
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-12
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-12
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		2e-12
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		2e-12
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		2e-12
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		2e-12
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-12
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		3e-12
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		3e-12
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		3e-12
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		3e-12
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		4e-12
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		4e-12
4fie_A	423	Full-Length Human Pak4 Length = 423		4e-12
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		4e-12
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		5e-12
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		6e-12
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		6e-12
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		6e-12
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		6e-12
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		6e-12
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		6e-12
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		6e-12
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		7e-12
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		7e-12
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		7e-12
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		7e-12
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		8e-12
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		8e-12
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		8e-12
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		8e-12
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		1e-11
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		1e-11
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-11
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		1e-11
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		1e-11
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		1e-11
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		1e-11
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		1e-11
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		1e-11
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		1e-11
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		1e-11
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		2e-11
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		2e-11
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		2e-11
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-11
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		2e-11
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		2e-11
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		2e-11
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		2e-11
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		3e-11
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		3e-11
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		3e-11
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		4e-11
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		4e-11
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		4e-11
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		5e-11
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		5e-11
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		5e-11
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		6e-11
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		6e-11
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		6e-11
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		7e-11
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		7e-11
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		7e-11
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		7e-11
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		7e-11
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		7e-11
3a7f_A	303	Human Mst3 Kinase Length = 303		8e-11
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		8e-11
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		8e-11
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		8e-11
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		9e-11
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-10
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-10
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-10
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-10
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-10
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-10
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-10
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		2e-10
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-10
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		3e-10
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		3e-10
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		3e-10
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		3e-10
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		3e-10
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		3e-10
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		3e-10
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		4e-10
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		4e-10
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		4e-10
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		5e-10
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		5e-10
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		5e-10
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		5e-10
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		5e-10
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		5e-10
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		5e-10
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		5e-10
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		5e-10
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		5e-10
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		6e-10
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		6e-10
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		6e-10
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		6e-10
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		6e-10
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		6e-10
4ae6_A	343	Structure And Function Of The Human Sperm-specific		6e-10
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		6e-10
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		6e-10
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		6e-10
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		7e-10
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		7e-10
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		7e-10
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		7e-10
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		7e-10
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		8e-10
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		8e-10
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		8e-10
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		9e-10
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		9e-10
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-09
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		1e-09
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-09
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		1e-09
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		1e-09
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		1e-09
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		1e-09
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		1e-09
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-09
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		1e-09
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		1e-09
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-09
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		1e-09
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		1e-09
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		1e-09
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		1e-09
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		1e-09
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		1e-09
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		1e-09
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		2e-09
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		2e-09
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		2e-09
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		2e-09
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-09
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-09
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-09
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-09
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		2e-09
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		2e-09
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-09
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-09
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-09
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		2e-09
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-09
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		2e-09
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		2e-09
4ae9_A	343	Structure And Function Of The Human Sperm-specific		2e-09
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		2e-09
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-09
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-09
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-09
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		2e-09
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		2e-09
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		2e-09
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		2e-09
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		2e-09
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		2e-09
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		2e-09
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		2e-09
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		2e-09
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		2e-09
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-09
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		2e-09
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-09
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		2e-09
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		2e-09
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-09
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		3e-09
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		3e-09
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		3e-09
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		3e-09
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		3e-09
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		3e-09
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		3e-09
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		3e-09
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		3e-09
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		3e-09
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		3e-09
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		3e-09
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		3e-09
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		3e-09
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		3e-09
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		3e-09
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		3e-09
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		3e-09
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		3e-09
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		3e-09
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		3e-09
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		4e-09
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		4e-09
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		4e-09
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		4e-09
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		4e-09
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		4e-09
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		4e-09
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		4e-09
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		4e-09
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		4e-09
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		5e-09
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		5e-09
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		5e-09
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		5e-09
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		6e-09
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		6e-09
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		6e-09
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		6e-09
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		6e-09
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		6e-09
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		7e-09
3soa_A	444	Full-Length Human Camkii Length = 444		7e-09
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		7e-09
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		8e-09
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		8e-09
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		8e-09
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		8e-09
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		8e-09
2pl0_A	289	Lck Bound To Imatinib Length = 289		9e-09
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		9e-09
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		1e-08
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		1e-08
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		1e-08
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		1e-08
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		1e-08
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-08
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		1e-08
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		1e-08
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-08
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		1e-08
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-08
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-08
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-08
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-08
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-08
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-08
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-08
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		2e-08
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		2e-08
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-08
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		2e-08
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		2e-08
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		2e-08
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		2e-08
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		2e-08
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		2e-08
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		2e-08
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		2e-08
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		2e-08
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-08
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-08
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		2e-08
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		2e-08
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		2e-08
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		2e-08
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-08
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-08
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		2e-08
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-08
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-08
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		2e-08
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		2e-08
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		3e-08
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		3e-08
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		3e-08
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		3e-08
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		3e-08
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		3e-08
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		4e-08
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		4e-08
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		5e-08
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		5e-08
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		5e-08
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		5e-08
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		5e-08
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		6e-08
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		6e-08
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		6e-08
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		6e-08
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		7e-08
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-08
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		7e-08
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		8e-08
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		8e-08
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		8e-08
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		8e-08
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		8e-08
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		8e-08
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		9e-08
3kk8_A	284	Camkii Substrate Complex A Length = 284		1e-07
3kk9_A	282	Camkii Substrate Complex B Length = 282		1e-07
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-07
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-07
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		1e-07
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		1e-07
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-07
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		1e-07
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		1e-07
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		1e-07
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		1e-07
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		1e-07
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		2e-07
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		2e-07
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		2e-07
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-07
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		2e-07
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		2e-07
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		2e-07
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-07
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		2e-07
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		2e-07
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		3e-07
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		3e-07
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		3e-07
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		3e-07
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		3e-07
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		3e-07
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		3e-07
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		3e-07
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		3e-07
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		3e-07
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		3e-07
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		3e-07
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		3e-07
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		4e-07
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		4e-07
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		4e-07
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		4e-07
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		4e-07
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		4e-07
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		4e-07
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		4e-07
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		4e-07
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		4e-07
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		5e-07
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		5e-07
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		5e-07
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		5e-07
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		5e-07
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		5e-07
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		5e-07
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		6e-07
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		6e-07
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		6e-07
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		6e-07
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		6e-07
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		6e-07
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		8e-07
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		8e-07
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		1e-06
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		1e-06
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		1e-06
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-06
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		1e-06
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		1e-06
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		1e-06
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-06
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		2e-06
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		2e-06
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		2e-06
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-06
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		2e-06
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		2e-06
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		2e-06
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-06
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-06
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-06
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-06
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		3e-06
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		3e-06
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		3e-06
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-06
2cmw_A	310	Structure Of Human Casein Kinase 1 Gamma-1 In Compl		3e-06
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		3e-06
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		3e-06
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		3e-06
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		3e-06
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		3e-06
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-06
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-06
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		3e-06
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		3e-06
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		3e-06
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		4e-06
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-06
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		4e-06
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		4e-06
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		4e-06
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-06
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		4e-06
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		4e-06
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		4e-06
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		4e-06
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		4e-06
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		4e-06
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		4e-06
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		4e-06
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		4e-06
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		4e-06
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		4e-06
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		4e-06
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		5e-06
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		5e-06
1ckj_A	317	Casein Kinase I Delta Truncation Mutant Containing		5e-06
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		5e-06
3uys_A	296	Crystal Structure Of Apo Human Ck1d Length = 296		5e-06
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-06
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-06
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		5e-06
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		6e-06
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		6e-06
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		6e-06
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		6e-06
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		6e-06
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		6e-06
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		6e-06
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		6e-06
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		6e-06
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		6e-06
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		6e-06
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		6e-06
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		6e-06
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		7e-06
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		7e-06
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		7e-06
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		7e-06
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		7e-06
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		7e-06
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		7e-06
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		8e-06
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		8e-06
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		8e-06
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		8e-06
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		8e-06
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		8e-06
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		8e-06
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		8e-06
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		8e-06
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		8e-06
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		8e-06
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		8e-06
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		8e-06
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		8e-06
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		9e-06
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		9e-06
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		9e-06
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		9e-06
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		9e-06
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		9e-06
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		9e-06
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		9e-06
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		9e-06
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		1e-05
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		1e-05
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		1e-05
1eh4_A	298	Binary Complex Of Casein Kinase-1 From S. Pombe Wit		1e-05
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		1e-05
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		1e-05
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		1e-05
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		1e-05
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		1e-05
2csn_A	297	Binary Complex Of Casein Kinase-1 With Cki7 Length		1e-05
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		1e-05
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		1e-05
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		1e-05
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		1e-05
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		1e-05
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		2e-05
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		2e-05
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		2e-05
4hgl_A	330	Crystal Structure Of Ck1g3 With Compound 1 Length =		2e-05
2chl_A	351	Structure Of Casein Kinase 1 Gamma 3 Length = 351		2e-05
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		2e-05
2izr_A	330	Structure Of Casein Kinase Gamma 3 In Complex With		2e-05
2c47_A	313	Structure Of Casein Kinase 1 Gamma 2 Length = 313		2e-05
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		2e-05
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		2e-05
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-05
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		2e-05
4h58_A	275	Braf In Complex With Compound 3 Length = 275		3e-05
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		3e-05
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		3e-05
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		3e-05
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		4e-05
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		4e-05
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		4e-05
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		4e-05
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		4e-05
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		4e-05
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		4e-05
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		5e-05
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		5e-05
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-05
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		6e-05
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		6e-05
4hni_A	296	Crystal Structure Of Ck1e In Complex With Pf4800567		7e-05
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		7e-05
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		7e-05
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		7e-05
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		8e-05
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		8e-05
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-05
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		8e-05
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		8e-05
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		8e-05
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		8e-05
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		8e-05
4fl2_A	636	Structural And Biophysical Characterization Of The		9e-05
4fl3_A	635	Structural And Biophysical Characterization Of The		9e-05
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-05
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		9e-05
2pzi_A	681	Crystal Structure Of Protein Kinase Pkng From Mycob		9e-05
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		9e-05
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		9e-05
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		9e-05
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-04
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		1e-04
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-04
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		1e-04
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		1e-04
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-04
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		1e-04
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		1e-04
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-04
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-04
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		1e-04
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-04
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-04
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-04
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		1e-04
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-04
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-04
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		1e-04
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		1e-04
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		1e-04
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		1e-04
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-04
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		2e-04
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		2e-04
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		2e-04
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-04
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-04
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-04
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-04
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		2e-04
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		2e-04
2z2w_A	285	Humand Wee1 Kinase Complexed With Inhibitor Pf03357		2e-04
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-04
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		2e-04
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		2e-04
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-04
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		2e-04
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		2e-04
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		2e-04
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		2e-04
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-04
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		3e-04
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		3e-04
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		3e-04
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		3e-04
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		3e-04
1x8b_A	289	Structure Of Human Wee1a Kinase: Kinase Domain Comp		3e-04
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		3e-04
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		3e-04
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-04
3bi6_A	287	Wee1 Kinase Complex With Inhibitor Pd352396 Length		3e-04
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-04
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		4e-04
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		4e-04
2in6_A	287	Wee1 Kinase Complex With Inhibitor Pd311839 Length		4e-04
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		4e-04
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		4e-04
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		4e-04
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		4e-04
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		4e-04
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		4e-04
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		4e-04
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		5e-04
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		5e-04
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-04
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		6e-04
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		7e-04
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		7e-04
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		7e-04
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		8e-04
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		9e-04

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score =  310 bits (793), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 157/331 (47%), Positives = 222/331 (67%), Gaps = 15/331 (4%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG- 103
           +I S +GEGTFG+V++C D  R    VA+KI++ ++KY+EAA +EI VL+++ + D    
Sbjct: 36  EIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNK 95
Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
           N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +PI  VR +A QL + + F+HD
Sbjct: 96  NLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHD 155
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T++ 
Sbjct: 156 NKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSATFDH 207
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
              + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAMMER
Sbjct: 208 EHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMER 267
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
           +LGP+P  M+++  +  +KY  RGRLDW E  ++   ++   K P  + L  +  +H   
Sbjct: 268 ILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRENCK-PLRRYLTSEAEEHHQ- 323
Query: 344 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            L  L++ +L Y+P  RLT  EAL+HPFF R
Sbjct: 324 -LFDLIESMLEYEPAKRLTLGEALQHPFFAR 353

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score =  291 bits (744), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 150/329 (45%), Positives = 213/329 (64%), Gaps = 15/329 (4%)
Query: 46  KIHSKMGEGTFGQVLECWD-RERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           +I   +GEG FG+V+EC D +     VA+KIV+ + +Y EAA  EI+VL+ L   D    
Sbjct: 17  EIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNST 76
Query: 105 -RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            RCVQ+  WF++  HICIVFE LG S YDF+++N +  F +D +R++A Q+ + + F+H 
Sbjct: 77  FRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS 136
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             + HTDLKPEN+L V S+Y +  + K      +D    +R   +  IKV+DFGS TY+ 
Sbjct: 137 NKLTHTDLKPENILFVQSDYTEAYNPK----IKRD----ERTLINPDIKVVDFGSATYDD 188
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
              + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +F TH++ EHLAMMER
Sbjct: 189 EHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER 248
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
           +LGPLP+HM+++  +   KY    RLDW E +++   +    K P  + ++ Q V+H   
Sbjct: 249 ILGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSAGRYVSRACK-PLKEFMLSQDVEHER- 304
Query: 344 DLTHLLQGLLRYDPTDRLTAREALRHPFF 372
            L  L+Q +L YDP  R+T REAL+HPFF
Sbjct: 305 -LFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score =  287 bits (734), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 211/330 (63%), Gaps = 15/330 (4%)
Query: 46  KIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           +I   +GEGTFG+V+EC D  R K  VA+KI+R + KYREAA +EI VL+++ + DK   
Sbjct: 54  EIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENK 113
Query: 105 -RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             CV + +WF++  H+CI FE LG + ++FL++NN++ +P+  VR +A QL   + F+H+
Sbjct: 114 FLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE 173
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             + HTDLKPEN+L V+SE+        +L+    S   K + K+++I+V DFGS T++ 
Sbjct: 174 NQLTHTDLKPENILFVNSEF-------ETLYNEHKSCEEKSV-KNTSIRVADFGSATFDH 225
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
                IV+TRHYR PEVIL LGW  PCD+WS+GCIL E   G  LFQTHEN EHL MME+
Sbjct: 226 EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 285
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
           +LGP+P HM+ R  +  +KY  +G L W E ++    +K   K P    ++   ++H   
Sbjct: 286 ILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKENCK-PLKSYMLQDSLEHV-- 340
Query: 344 DLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
            L  L++ +L +DP  R+T  EAL HPFF 
Sbjct: 341 QLFDLMRRMLEFDPAQRITLAEALLHPFFA 370

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score =  286 bits (733), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 211/330 (63%), Gaps = 15/330 (4%)
Query: 46  KIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           +I   +GEGTFG+V+EC D  R K  VA+KI+R + KYREAA +EI VL+++ + DK   
Sbjct: 31  EIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENK 90
Query: 105 -RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             CV + +WF++  H+CI FE LG + ++FL++NN++ +P+  VR +A QL   + F+H+
Sbjct: 91  FLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE 150
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             + HTDLKPEN+L V+SE+        +L+    S   K + K+++I+V DFGS T++ 
Sbjct: 151 NQLTHTDLKPENILFVNSEF-------ETLYNEHKSCEEKSV-KNTSIRVADFGSATFDH 202
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
                IV+TRHYR PEVIL LGW  PCD+WS+GCIL E   G  LFQTHEN EHL MME+
Sbjct: 203 EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 262
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
           +LGP+P HM+ R  +  +KY  +G L W E ++    +K   K P    ++   ++H   
Sbjct: 263 ILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKENCK-PLKSYMLQDSLEHV-- 317
Query: 344 DLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
            L  L++ +L +DP  R+T  EAL HPFF 
Sbjct: 318 QLFDLMRRMLEFDPAQRITLAEALLHPFFA 347

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score =  286 bits (733), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 211/330 (63%), Gaps = 15/330 (4%)
Query: 46  KIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           +I   +GEGTFG+V+EC D  R K  VA+KI+R + KYREAA +EI VL+++ + DK   
Sbjct: 22  EIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENK 81
Query: 105 -RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             CV + +WF++  H+CI FE LG + ++FL++NN++ +P+  VR +A QL   + F+H+
Sbjct: 82  FLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE 141
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             + HTDLKPEN+L V+SE+        +L+    S   K + K+++I+V DFGS T++ 
Sbjct: 142 NQLTHTDLKPENILFVNSEF-------ETLYNEHKSCEEKSV-KNTSIRVADFGSATFDH 193
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
                IV+TRHYR PEVIL LGW  PCD+WS+GCIL E   G  LFQTHEN EHL MME+
Sbjct: 194 EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 253
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
           +LGP+P HM+ R  +  +KY  +G L W E ++    +K   K P    ++   ++H   
Sbjct: 254 ILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKENCK-PLKSYMLQDSLEHV-- 308
Query: 344 DLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
            L  L++ +L +DP  R+T  EAL HPFF 
Sbjct: 309 QLFDLMRRMLEFDPAQRITLAEALLHPFFA 338

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score =  286 bits (733), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 148/329 (44%), Positives = 211/329 (64%), Gaps = 15/329 (4%)
Query: 46  KIHSKMGEGTFGQVLECWD-RERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           +I   +GEG FG+V+EC D +     VA+KIV+ + +Y EAA  EI+VL+ L   D    
Sbjct: 17  EIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNST 76
Query: 105 -RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            RCVQ+  WF++  HICIVFE LG S YDF+++N +  F +D +R++A Q+ + + F+H 
Sbjct: 77  FRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS 136
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             + HTDLKPEN+L V S+Y +  + K      +D    +R   +  IKV+DFGS TY+ 
Sbjct: 137 NKLTHTDLKPENILFVQSDYTEAYNPK----IKRD----ERTLINPDIKVVDFGSATYDD 188
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
              + +V  RHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +F TH++ EHLAMMER
Sbjct: 189 EHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER 248
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
           +LGPLP+HM+++  +   KY    RLDW E +++   +    K P  + ++ Q V+H   
Sbjct: 249 ILGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSAGRYVSRACK-PLKEFMLSQDVEHER- 304
Query: 344 DLTHLLQGLLRYDPTDRLTAREALRHPFF 372
            L  L+Q +L YDP  R+T REAL+HPFF
Sbjct: 305 -LFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score =  242 bits (617), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 133/330 (40%), Positives = 198/330 (60%), Gaps = 19/330 (5%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           KMG+GTFG+VL C   + K+  A+K+VR IKKY  +A IE ++L+++   D   N  V+ 
Sbjct: 42  KMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKY 101
Query: 110 RNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHT 169
              F Y +H+C++FE LG SLY+ + +NNY  F I+ ++    ++L+ + ++  + + HT
Sbjct: 102 HGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHT 161
Query: 170 DLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM----PKSSAIKVIDFGSTTYERPD 225
           DLKPEN+LL        P ++ SL T +  +  K++     KS+ IK+IDFG  T++   
Sbjct: 162 DLKPENILLDD------PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY 215
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
              I++TR YRAPEVIL LGW    D+WS GC+L EL TG  LF+THE++EHLAMME ++
Sbjct: 216 HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESII 275
Query: 286 GPLPQHMLKRVDR-HAEKYVRRG--RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
            P+P++ML    + +  KYV +   +L WPE A+S  SIK V K   L  +I   +    
Sbjct: 276 QPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHEL---- 331
Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                 L  +L+ DPT R +  E L+H F 
Sbjct: 332 --FCDFLYSILQIDPTLRPSPAELLKHKFL 359

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score =  186 bits (471), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 183/352 (51%), Gaps = 53/352 (15%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +I S +G+G+FGQV++ +DR  +E VAIKI++  K +   A IE+ +L+ + KHD     
Sbjct: 57  EIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKY 116
Query: 106 -CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-- 162
             V ++  F +RNH+C+VFE L  +LYD LR  N+R   ++L R+ A+Q+   + F+   
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP 176
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
           +L +IH DLKPEN+LL +                         PK SAIK++DFGS+   
Sbjct: 177 ELSIIHCDLKPENILLCN-------------------------PKRSAIKIVDFGSSCQL 211
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
                  + +R YR+PEV+LG+ +    D+WS+GCILVE+ TGE LF     ++ +  + 
Sbjct: 212 GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS---VMKLP---RLQNLI-- 334
            VLG  P H+L +  + A K+  +     P+G  + +  K      K P   +L N++  
Sbjct: 272 EVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTRKLHNILGV 326
Query: 335 ---------MQHVDHSAGD---LTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                         H+  D      L+  +L YDP  R+    AL+H FF +
Sbjct: 327 ETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 378

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score =  185 bits (469), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 183/352 (51%), Gaps = 53/352 (15%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +I S +G+G+FGQV++ +DR  +E VAIKI++  K +   A IE+ +L+ + KHD     
Sbjct: 38  EIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKY 97
Query: 106 -CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-- 162
             V ++  F +RNH+C+VFE L  +LYD LR  N+R   ++L R+ A+Q+   + F+   
Sbjct: 98  YIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP 157
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
           +L +IH DLKPEN+LL +                         PK SAIK++DFGS+   
Sbjct: 158 ELSIIHCDLKPENILLCN-------------------------PKRSAIKIVDFGSSCQL 192
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
                  + +R YR+PEV+LG+ +    D+WS+GCILVE+ TGE LF     ++ +  + 
Sbjct: 193 GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 252
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS---VMKLP---RLQNLI-- 334
            VLG  P H+L +  + A K+  +     P+G  + +  K      K P   +L N++  
Sbjct: 253 EVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTRKLHNILGV 307
Query: 335 ---------MQHVDHSAGD---LTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                         H+  D      L+  +L YDP  R+    AL+H FF +
Sbjct: 308 ETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 359

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score =  183 bits (465), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 182/352 (51%), Gaps = 53/352 (15%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +I S +G+G+FGQV++ +DR  +E VAIKI++  K +   A IE+ +L+ + KHD     
Sbjct: 57  EIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKY 116
Query: 106 -CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-- 162
             V ++  F +RNH+C+VFE L  +LYD LR  N+R   ++L R+ A+Q+   + F+   
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP 176
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
           +L +IH DLKPEN+LL +                         PK  AIK++DFGS+   
Sbjct: 177 ELSIIHCDLKPENILLCN-------------------------PKRXAIKIVDFGSSCQL 211
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
                  + +R YR+PEV+LG+ +    D+WS+GCILVE+ TGE LF     ++ +  + 
Sbjct: 212 GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS---VMKLP---RLQNLI-- 334
            VLG  P H+L +  + A K+  +     P+G  + +  K      K P   +L N++  
Sbjct: 272 EVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTRKLHNILGV 326
Query: 335 ---------MQHVDHSAGD---LTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                         H+  D      L+  +L YDP  R+    AL+H FF +
Sbjct: 327 ETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 378

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score =  181 bits (458), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 174/348 (50%), Gaps = 44/348 (12%)
Query: 42  AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 101
           A+  ++   +G+G+FGQV++ +D +  + VA+K+VR  K++   A  EI +L+ L K DK
Sbjct: 96  AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDK 155
Query: 102 GGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                 + +   F +RNHIC+ FE L  +LY+ ++KN ++ F + LVR+ A  +L+C+  
Sbjct: 156 DNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDA 215
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   +IH DLKPEN+LL                         +    S IKVIDFGS+ 
Sbjct: 216 LHKNRIIHCDLKPENILL-------------------------KQQGRSGIKVIDFGSSC 250
Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
           YE       + +R YRAPEVILG  +  P D+WS+GCIL EL TG  L    +  + LA 
Sbjct: 251 YEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLAC 310
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRR--------------GRLDWPEGAASRESIKSVMK 326
           M  +LG +P   L    + A+ +V                G +    G + R  ++   +
Sbjct: 311 MIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPE 369
Query: 327 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                N +    D    D    L+  L +DP  R+T  +ALRHP+  R
Sbjct: 370 SREWGNALKGCDDPLFLD---FLKQCLEWDPAVRMTPGQALRHPWLRR 414

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score =  180 bits (456), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 170/339 (50%), Gaps = 44/339 (12%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQI 109
           +G+G+FGQV++ +D +  + VA+K+VR  K++   A  EI +L+ L K DK      + +
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHM 164
Query: 110 RNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHT 169
              F +RNHIC+ FE L  +LY+ ++KN ++ F + LVR+ A  +L+C+  +H   +IH 
Sbjct: 165 LENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHC 224
Query: 170 DLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI 229
           DLKPEN+LL                         +    S IKVIDFGS+ YE       
Sbjct: 225 DLKPENILL-------------------------KQQGRSGIKVIDFGSSCYEHQRVYTX 259
Query: 230 VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLP 289
           + +R YRAPEVILG  +  P D+WS+GCIL EL TG  L    +  + LA M  +LG +P
Sbjct: 260 IQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLG-MP 318
Query: 290 QHMLKRVDRHAEKYVRR--------------GRLDWPEGAASRESIKSVMKLPRLQNLIM 335
              L    + A+ +V                G +    G + R  ++   +     N + 
Sbjct: 319 SQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALK 378
Query: 336 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
              D    D    L+  L +DP  R+T  +ALRHP+  R
Sbjct: 379 GCDDPLFLD---FLKQCLEWDPAVRMTPGQALRHPWLRR 414

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score =  179 bits (454), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 169/339 (49%), Gaps = 44/339 (12%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQI 109
           +G+G FGQV++ +D +  + VA+K+VR  K++   A  EI +L+ L K DK      + +
Sbjct: 105 IGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHM 164
Query: 110 RNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHT 169
              F +RNHIC+ FE L  +LY+ ++KN ++ F + LVR+ A  +L+C+  +H   +IH 
Sbjct: 165 LENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHC 224
Query: 170 DLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI 229
           DLKPEN+LL                         +    S IKVIDFGS+ YE       
Sbjct: 225 DLKPENILL-------------------------KQQGRSGIKVIDFGSSCYEHQRVYXX 259
Query: 230 VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLP 289
           + +R YRAPEVILG  +  P D+WS+GCIL EL TG  L    +  + LA M  +LG +P
Sbjct: 260 IQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLG-MP 318
Query: 290 QHMLKRVDRHAEKYVRR--------------GRLDWPEGAASRESIKSVMKLPRLQNLIM 335
              L    + A+ +V                G +    G + R  ++   +     N + 
Sbjct: 319 XQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALK 378
Query: 336 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
              D    D    L+  L +DP  R+T  +ALRHP+  R
Sbjct: 379 GCDDPLFLD---FLKQCLEWDPAVRMTPGQALRHPWLRR 414

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score =  162 bits (411), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 181/365 (49%), Gaps = 53/365 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG-NRCVQ 108
           K+G G F  V   WD + K+ VA+K+V+  + Y E A+ EI +L+ +   D    NR + 
Sbjct: 28  KLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMV 87
Query: 109 IRNWFDYR------NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
           ++   D++       HIC+VFE LG  L  ++ K+NY+  P+  V++I +Q+L+ + ++H
Sbjct: 88  VQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH 147
Query: 163 DLC-MIHTDLKPENVLL-VSSEYIK-----VPDYKSSLHTPKDSSYFKRMPKSSA----- 210
             C +IHTD+KPEN+LL V+ +YI+       +++ S   P   S     P ++      
Sbjct: 148 TKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVN 207
Query: 211 -----------IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 259
                      +K+ D G+  +        + TR YR+ EV++G G+  P DIWS  C+ 
Sbjct: 208 PLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMA 267
Query: 260 VELCTGEALFQTHENLE------HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE 313
            EL TG+ LF+ H   E      H+A++  +LG +P+ ++       E + ++G L    
Sbjct: 268 FELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL---- 323
Query: 314 GAASRESIKSVMKLP--RLQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALR 368
                   K + KL    L  ++++  + S   A   T  L  +L   P  R TA E LR
Sbjct: 324 --------KHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 375
Query: 369 HPFFT 373
           HP+  
Sbjct: 376 HPWLN 380

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 181/365 (49%), Gaps = 53/365 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG-NRCVQ 108
           K+G G F  V   WD + K+ VA+K+V+  + Y E A+ EI +L+ +   D    NR + 
Sbjct: 44  KLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMV 103
Query: 109 IRNWFDYR------NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
           ++   D++       HIC+VFE LG  L  ++ K+NY+  P+  V++I +Q+L+ + ++H
Sbjct: 104 VQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH 163
Query: 163 DLC-MIHTDLKPENVLL-VSSEYIK-----VPDYKSSLHTPKDSSYFKRMPKSSA----- 210
             C +IHTD+KPEN+LL V+ +YI+       +++ S   P   S     P ++      
Sbjct: 164 TKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVN 223
Query: 211 -----------IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 259
                      +K+ D G+  +        + TR YR+ EV++G G+  P DIWS  C+ 
Sbjct: 224 PLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMA 283
Query: 260 VELCTGEALFQTHENLE------HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE 313
            EL TG+ LF+ H   E      H+A++  +LG +P+ ++       E + ++G L    
Sbjct: 284 FELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL---- 339
Query: 314 GAASRESIKSVMKLP--RLQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALR 368
                   K + KL    L  ++++  + S   A   T  L  +L   P  R TA E LR
Sbjct: 340 --------KHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391
Query: 369 HPFFT 373
           HP+  
Sbjct: 392 HPWLN 396

>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389

Iteration: 1
 Score =  160 bits (404), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 175/361 (48%), Gaps = 47/361 (13%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQ---QLAKHDKGGNRC 106
           K+G G F  V  CWD + K  VA+K+V+  + Y E A+ EI++L+   +    D   +  
Sbjct: 38  KLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDPNKDMV 97
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
           VQ+ + F        H+C+VFE LG  L  ++ K+NY+  P+  V+ I RQ+L+ + ++H
Sbjct: 98  VQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLH 157
Query: 163 DLC-MIHTDLKPENVLL-VSSEYIK-----VPDYKSSLHTPKDSSYFKRMPKSSA----- 210
             C +IHTD+KPEN+L+ V   Y++       +++ +   P   S     P +       
Sbjct: 158 SKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPAADLLVNPL 217
Query: 211 ---------IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 261
                    +K+ D G+  +        + TR YR+ EV++G G++ P DIWS  C+  E
Sbjct: 218 DPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFE 277
Query: 262 LCTGEALFQTHE------NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA 315
           L TG+ LF+ H       + +H+A +  +LG +P+H         E + RRG L      
Sbjct: 278 LATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGEL------ 331
Query: 316 ASRESIKSVMKLPRLQNLIMQHVD---HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             R   K  +K   L +++++        A   T  L  +L   P  R +A E LRHP+ 
Sbjct: 332 --RHITK--LKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWL 387
Query: 373 T 373
Sbjct: 388 N 388

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score =  148 bits (374), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 172/345 (49%), Gaps = 55/345 (15%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK------GG 103
           K+G G F  V    D      VA+KIVRG K Y EAA  EI++LQ++   D       G 
Sbjct: 26  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 85
Query: 104 NRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
           N  +++ + F+++     H+ +VFE LG +L   ++K  +R  P+  V++I++QLL  + 
Sbjct: 86  NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLD 145
Query: 160 FMHDLC-MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
           +MH  C +IHTD+KPENVL+   E +  P+                      IK+ D G+
Sbjct: 146 YMHRRCGIIHTDIKPENVLM---EIVDSPE------------------NLIQIKIADLGN 184
Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE----- 273
             +        + TR YR+PEV+LG  W    DIWS  C++ EL TG+ LF+  E     
Sbjct: 185 ACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYT 244
Query: 274 -NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP--RL 330
            + +H+A +  +LG LP ++L+       KY R           SR  ++++ KL    L
Sbjct: 245 KDDDHIAQIIELLGELPSYLLRN-----GKYTRT-------FFNSRGLLRNISKLKFWPL 292
Query: 331 QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           ++++ +    S   A +++  L  +L+ DP  R  A   + HP+ 
Sbjct: 293 EDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score =  148 bits (374), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 172/345 (49%), Gaps = 55/345 (15%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK------GG 103
           K+G G F  V    D      VA+KIVRG K Y EAA  EI++LQ++   D       G 
Sbjct: 26  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 85
Query: 104 NRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
           N  +++ + F+++     H+ +VFE LG +L   ++K  +R  P+  V++I++QLL  + 
Sbjct: 86  NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLD 145
Query: 160 FMHDLC-MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
           +MH  C +IHTD+KPENVL+   E +  P+                      IK+ D G+
Sbjct: 146 YMHRRCGIIHTDIKPENVLM---EIVDSPE------------------NLIQIKIADLGN 184
Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE----- 273
             +        + TR YR+PEV+LG  W    DIWS  C++ EL TG+ LF+  E     
Sbjct: 185 ACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYT 244
Query: 274 -NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP--RL 330
            + +H+A +  +LG LP ++L+       KY R           SR  ++++ KL    L
Sbjct: 245 KDDDHIAQIIELLGELPSYLLRN-----GKYTRT-------FFNSRGLLRNISKLKFWPL 292
Query: 331 QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           ++++ +    S   A +++  L  +L+ DP  R  A   + HP+ 
Sbjct: 293 EDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 155/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L DF+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKPEN LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPEN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 155/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 12  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 66
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L DF+  +     P+ L++    QLL+ +AF H   +
Sbjct: 67  VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 127 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 159
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 220 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 260
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 261 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 155/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 13  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 67
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L DF+  +     P+ L++    QLL+ +AF H   +
Sbjct: 68  VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 128 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 160
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 221 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 261
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 262 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 11  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 65
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 66  VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKPEN LL+++E                           AIK+ DFG +  +  P 
Sbjct: 126 LHRDLKPEN-LLINTE--------------------------GAIKLADFGLARAFGVPV 158
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 219 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 259
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 260 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  118 bits (295), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 13  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 67
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 68  VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKPEN LL+++E                           AIK+ DFG +  +  P 
Sbjct: 128 LHRDLKPEN-LLINTE--------------------------GAIKLADFGLARAFGVPV 160
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 221 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 261
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 262 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score =  117 bits (294), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 11  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 65
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 66  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKPEN LL+++E                           AIK+ DFG +  +  P 
Sbjct: 126 LHRDLKPEN-LLINTE--------------------------GAIKLADFGLARAFGVPV 158
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 219 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 259
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 260 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  117 bits (294), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 12  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 66
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 67  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKPEN LL+++E                           AIK+ DFG +  +  P 
Sbjct: 127 LHRDLKPEN-LLINTE--------------------------GAIKLADFGLARAFGVPV 159
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 220 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 260
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 261 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 17  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 71
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 72  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 132 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 164
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 165 RTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 224
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 225 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 265
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 266 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 294

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 17  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 71
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 72  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 132 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 164
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 165 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 224
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 225 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 265
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 266 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 294

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 9   KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 63
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 124 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 156
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 217 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 257
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 14  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 68
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 69  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 129 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 161
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 162 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 221
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 222 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 262
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 263 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 291

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 9   KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 63
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 124 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 156
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 217 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 257
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 13  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 67
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE +   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 68  VKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 128 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 160
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 221 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 261
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 262 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 11  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 65
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 66  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 126 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 158
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 159 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 219 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 259
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 260 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 14  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 68
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 69  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 129 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 161
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 162 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 221
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 222 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 262
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 263 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 291

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 9   KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 63
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 124 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 156
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 157 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 217 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 257
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 13  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 67
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 68  VKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 128 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 160
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 221 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 261
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 262 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 12  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 66
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 67  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 127 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 159
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 220 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 260
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 261 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 11  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 65
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 66  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 126 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 158
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 219 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 259
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 260 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 13  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 67
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 68  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 128 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 160
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 221 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 261
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 262 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 9   KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 63
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 124 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 156
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 157 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 217 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 257
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 13  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 67
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 68  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 128 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 160
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 221 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 261
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 262 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 12  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 66
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 67  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 127 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 159
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 220 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 260
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 261 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 11  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 65
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 66  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 126 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 158
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 219 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 259
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 260 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 9   KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 63
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE +   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 64  VKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 124 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 156
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 217 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 257
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ ++F H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRV 124
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score =  114 bits (286), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 153/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+  +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  114 bits (286), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 153/331 (46%), Gaps = 61/331 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  ++   E+VA+  +R     +     A+ EI +L++L   +      
Sbjct: 9   KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN-----I 63
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 124 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 156
Query: 226 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 341
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 217 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 257
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 158/335 (47%), Gaps = 66/335 (19%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---YREAAMIEIEVLQQLAKHDKGGNR 105
            K+GEG++G V +C +R+  ++VAIK     +     ++ A+ EI +L+QL KH      
Sbjct: 9   GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHPN---- 63
Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            V +   F  +  + +VFE    ++   L +   R  P  LV+ I  Q L+ + F H   
Sbjct: 64  LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
            IH D+KPEN+L+                            K S IK+ DFG        
Sbjct: 123 CIHRDVKPENILIT---------------------------KHSVIKLCDFGFARLLTGP 155
Query: 226 QNYI---VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
            +Y    V+TR YR+PE+++G   +  P D+W++GC+  EL +G  L+    +++ L ++
Sbjct: 156 SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLI 215
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            + LG L       + RH + +             S     S +K+P  ++  M+ ++  
Sbjct: 216 RKTLGDL-------IPRHQQVF-------------STNQYFSGVKIPDPED--MEPLELK 253
Query: 342 AGDLTH----LLQGLLRYDPTDRLTAREALRHPFF 372
             ++++    LL+G L  DPT+RLT  + L HP+F
Sbjct: 254 FPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score =  111 bits (278), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 165/331 (49%), Gaps = 20/331 (6%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           K+G+G +G V +  DR   E+VA+K I    +   +A     EI +L +L+ H+   N  
Sbjct: 16  KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
             +R   D    + +VF+ + + L+  +R N     P+   + +  QL++ I ++H   +
Sbjct: 76  NVLR--ADNDRDVYLVFDYMETDLHAVIRANILE--PVH-KQYVVYQLIKVIKYLHSGGL 130
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H D+KP N+LL +  ++KV D+  S            +P S      +F     ++P  
Sbjct: 131 LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD---DQPIL 187
Query: 227 NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
              V+TR YRAPE++LG   +T   D+WS+GCIL E+  G+ +F     +  L   ER++
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL---ERII 244
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG-- 343
           G +     + V+     + +       E    R+S K  +   + +NL+++ ++  A   
Sbjct: 245 GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDI-FTKWKNLLLK-INPKADCN 302
Query: 344 -DLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
            +   LL  LL+++P  R++A +AL+HPF +
Sbjct: 303 EEALDLLDKLLQFNPNKRISANDALKHPFVS 333

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 157/344 (45%), Gaps = 77/344 (22%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           K+G GT+  V +  ++     VA+K V+    +     A+ EI ++++L KH+      V
Sbjct: 12  KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-KHE----NIV 66
Query: 108 QIRNWFDYRNHICIVFEKLGSSLYDFLRK----NNYRSFPIDLVREIARQLLECIAFMHD 163
           ++ +     N + +VFE + + L  ++      N  R   ++LV+    QLL+ +AF H+
Sbjct: 67  RLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE 126
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             ++H DLKP+N+L+     +K+ D+               + ++  I V  F S     
Sbjct: 127 NKILHRDLKPQNLLINKRGQLKLGDFG--------------LARAFGIPVNTFSSE---- 168
Query: 224 PDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
                 V T  YRAP+V++G   ++   DIWS GCIL E+ TG+ LF    + E L ++ 
Sbjct: 169 ------VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF 222
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR------------L 330
            ++G  P   L                 WP          SV KLP+            L
Sbjct: 223 DIMG-TPNESL-----------------WP----------SVTKLPKYNPNIQQRPPRDL 254
Query: 331 QNLIMQHVDHSA-GDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
           + ++  H      G+L   L GLL+ +P  RL+A++AL HP+F 
Sbjct: 255 RQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFA 298

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 157/371 (42%), Gaps = 97/371 (26%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVL----------------- 93
           +G G+FG V E +D E  +  A+K V    +Y+   +  ++VL                 
Sbjct: 15  LGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGD 74
Query: 94  ------QQLAKHDKGGNRCVQIRNWF-------DYRNHICIVFEKLGSSLYDFLRK--NN 138
                 Q    H+K G +   + N             ++ ++ E +  +L+  L+    +
Sbjct: 75  EEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRS 134
Query: 139 YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD 198
            RS P++L+     QL   + F+H L + H D+KP+N+L+ S                  
Sbjct: 135 GRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS------------------ 176
Query: 199 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSV 255
                   K + +K+ DFGS     P +  +  + +R YRAPE++LG   +T   D+WS+
Sbjct: 177 --------KDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSI 228
Query: 256 GCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL---DW- 311
           GC+  EL  G+ LF    +++ L  + +++G   +  + R++ H  + VR   L   DW 
Sbjct: 229 GCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTE-VRFPTLKAKDWR 287
Query: 312 ---PEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 368
              PEG  S                              LL+ +LRY+P  R+   EA+ 
Sbjct: 288 KILPEGTPSLA--------------------------IDLLEQILRYEPDLRINPYEAMA 321
Query: 369 HPFFTRDHLRR 379
           HPFF  DHLR 
Sbjct: 322 HPFF--DHLRN 330

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 151/334 (45%), Gaps = 60/334 (17%)
Query: 49  SKMGEGTFGQVLECWD-RERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGG- 103
           +++GEG +G+V +  D +     VA+K VR   G +    + + E+ VL+ L   +    
Sbjct: 17  AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 104 ----NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
               + C   R   D    + +VFE +   L  +L K      P + ++++  QLL  + 
Sbjct: 77  VRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           F+H   ++H DLKP+N+L+ SS  IK+ D+  +        Y  +M  +S          
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA------RIYSFQMALTS---------- 178
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
                    +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF+   +++ L 
Sbjct: 179 ---------VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG 229
Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRLQNLIMQHV 338
            +  V+G LP                 G  DWP   A  R++  S    P ++  +   +
Sbjct: 230 KILDVIG-LP-----------------GEEDWPRDVALPRQAFHSKSAQP-IEKFVTD-I 269
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           D    D   LL   L ++P  R++A  AL HP+F
Sbjct: 270 DELGKD---LLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 151/334 (45%), Gaps = 60/334 (17%)
Query: 49  SKMGEGTFGQVLECWD-RERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGG- 103
           +++GEG +G+V +  D +     VA+K VR   G +    + + E+ VL+ L   +    
Sbjct: 17  AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 104 ----NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
               + C   R   D    + +VFE +   L  +L K      P + ++++  QLL  + 
Sbjct: 77  VRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           F+H   ++H DLKP+N+L+ SS  IK+ D+  +        Y  +M  +S          
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA------RIYSFQMALTS---------- 178
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
                    +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF+   +++ L 
Sbjct: 179 ---------VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG 229
Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRLQNLIMQHV 338
            +  V+G LP                 G  DWP   A  R++  S    P ++  +   +
Sbjct: 230 KILDVIG-LP-----------------GEEDWPRDVALPRQAFHSKSAQP-IEKFVTD-I 269
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           D    D   LL   L ++P  R++A  AL HP+F
Sbjct: 270 DELGKD---LLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 151/334 (45%), Gaps = 60/334 (17%)
Query: 49  SKMGEGTFGQVLECWD-RERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGG- 103
           +++GEG +G+V +  D +     VA+K VR   G +    + + E+ VL+ L   +    
Sbjct: 17  AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 104 ----NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
               + C   R   D    + +VFE +   L  +L K      P + ++++  QLL  + 
Sbjct: 77  VRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           F+H   ++H DLKP+N+L+ SS  IK+ D+  +        Y  +M  +S          
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA------RIYSFQMALTS---------- 178
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
                    +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF+   +++ L 
Sbjct: 179 ---------VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG 229
Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRLQNLIMQHV 338
            +  V+G LP                 G  DWP   A  R++  S    P ++  +   +
Sbjct: 230 KILDVIG-LP-----------------GEEDWPRDVALPRQAFHSKSAQP-IEKFVTD-I 269
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           D    D   LL   L ++P  R++A  AL HP+F
Sbjct: 270 DELGKD---LLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score =  107 bits (268), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 157/348 (45%), Gaps = 86/348 (24%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    E  E VAIK V   K+++     E+++++ + KH       V ++
Sbjct: 48  IGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNR---ELQIMR-IVKHPN----VVDLK 98
Query: 111 NWF----DYRNHICI--VFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAFMH 162
            +F    D ++ + +  V E +  ++Y   R      ++ P+ L++    QLL  +A++H
Sbjct: 99  AFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH 158
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY- 221
            + + H D+KP+N+LL                           P S  +K+IDFGS    
Sbjct: 159 SIGICHRDIKPQNLLL--------------------------DPPSGVLKLIDFGSAKIL 192
Query: 222 --ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
               P+ + I S R+YRAPE+I G   +T   DIWS GC++ EL  G+ LF     ++ L
Sbjct: 193 IAGEPNVSXICS-RYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQL 251
Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM------KLPRLQN 332
             + +VL                            G  SRE IK++       K P+++ 
Sbjct: 252 VEIIKVL----------------------------GTPSREQIKTMNPNYMEHKFPQIRP 283
Query: 333 LIMQHV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
                V    +  D   L+  LL Y P+ RLTA EAL HPFF  D LR
Sbjct: 284 HPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF--DELR 329

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 146/336 (43%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGG-- 103
           +++G G +G V +  D      VA+K VR   G +    + + E+ +L++L   +     
Sbjct: 10  AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 104 ---NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
              + C   R   D    + +VFE +   L  +L K      P + ++++ RQ L  + F
Sbjct: 70  RLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H  C++H DLKPEN+L+ S   +K+ D+  +                   ++  +    
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLA-------------------RIYSYQMAL 168
Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
           +       +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +   + L  
Sbjct: 169 FP------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK 222
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRLQNLIMQHVD 339
           +  ++G  P+                   DWP   +  R +     + PR    ++  ++
Sbjct: 223 IFDLIGLPPED------------------DWPRDVSLPRGAFPP--RGPRPVQSVVPEME 262
Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
            S      LL  +L ++P  R++A  AL+H +  +D
Sbjct: 263 ESGA---QLLLEMLTFNPHKRISAFRALQHSYLHKD 295

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 147/336 (43%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGG-- 103
           +++G G +G V +  D      VA+K VR   G +    + + E+ +L++L   +     
Sbjct: 10  AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 104 ---NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
              + C   R   D    + +VFE +   L  +L K      P + ++++ RQ L  + F
Sbjct: 70  RLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H  C++H DLKPEN+L+ S   +K+ D+  +    +  SY   +               
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLA----RIYSYQMAL--------------- 168
Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                 + +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +   + L  
Sbjct: 169 ------DPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK 222
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRLQNLIMQHVD 339
           +  ++G  P+                   DWP   +  R +     + PR    ++  ++
Sbjct: 223 IFDLIGLPPED------------------DWPRDVSLPRGAFPP--RGPRPVQSVVPEME 262
Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
            S      LL  +L ++P  R++A  AL+H +  +D
Sbjct: 263 ESGA---QLLLEMLTFNPHKRISAFRALQHSYLHKD 295

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 146/336 (43%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGG-- 103
           +++G G +G V +  D      VA+K VR   G +    + + E+ +L++L   +     
Sbjct: 10  AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 104 ---NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
              + C   R   D    + +VFE +   L  +L K      P + ++++ RQ L  + F
Sbjct: 70  RLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H  C++H DLKPEN+L+ S   +K+ D+  +        Y  +M  +            
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLA------RIYSYQMALAP----------- 170
Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                   +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +   + L  
Sbjct: 171 --------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK 222
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRLQNLIMQHVD 339
           +  ++G  P+                   DWP   +  R +     + PR    ++  ++
Sbjct: 223 IFDLIGLPPED------------------DWPRDVSLPRGAFPP--RGPRPVQSVVPEME 262
Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
            S      LL  +L ++P  R++A  AL+H +  +D
Sbjct: 263 ESGA---QLLLEMLTFNPHKRISAFRALQHSYLHKD 295

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 149/332 (44%), Gaps = 64/332 (19%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIK-IVRGIKK--YREAAMIEIEVLQQLAKHDKGG---- 103
           +G G +G V    D+   E VAIK + R  +   + + A  E+ +L+ +   +  G    
Sbjct: 50  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 104 -NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
                 +RN++D+  ++ + F +        L+K     F  + ++ +  Q+L+ + ++H
Sbjct: 110 FTPASSLRNFYDF--YLVMPFMQTD------LQKIMGMEFSEEKIQYLVYQMLKGLKYIH 161
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              ++H DLKP N+ +                            +   +K++DFG   + 
Sbjct: 162 SAGVVHRDLKPGNLAV---------------------------NEDCELKILDFGLARHA 194
Query: 223 RPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
             +    V TR YRAPEVIL  + +    DIWSVGCI+ E+ TG+ LF+  + L+ L  +
Sbjct: 195 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 254
Query: 282 ERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
            +V G P  + + K  D+ A+ Y                 I+S+ + PR      Q    
Sbjct: 255 LKVTGVPGTEFVQKLNDKAAKSY-----------------IQSLPQTPRKD--FTQLFPR 295
Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           ++     LL+ +L  D   RLTA +AL HPFF
Sbjct: 296 ASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++         D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTD---DHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + + S +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDSELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 FGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 149/332 (44%), Gaps = 64/332 (19%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIK-IVRGIKK--YREAAMIEIEVLQQLAKHDKGG---- 103
           +G G +G V    D+   E VAIK + R  +   + + A  E+ +L+ +   +  G    
Sbjct: 32  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 104 -NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
                 +RN++D+  ++ + F +        L+K     F  + ++ +  Q+L+ + ++H
Sbjct: 92  FTPASSLRNFYDF--YLVMPFMQTD------LQKIMGLKFSEEKIQYLVYQMLKGLKYIH 143
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              ++H DLKP N+                            + +   +K++DFG   + 
Sbjct: 144 SAGVVHRDLKPGNL---------------------------AVNEDCELKILDFGLARHA 176
Query: 223 RPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
             +    V TR YRAPEVIL  + +    DIWSVGCI+ E+ TG+ LF+  + L+ L  +
Sbjct: 177 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236
Query: 282 ERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
            +V G P  + + K  D+ A+ Y                 I+S+ + PR      Q    
Sbjct: 237 LKVTGVPGTEFVQKLNDKAAKSY-----------------IQSLPQTPRKD--FTQLFPR 277
Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           ++     LL+ +L  D   RLTA +AL HPFF
Sbjct: 278 ASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 152/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 30  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 80
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 81  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 137
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + + S +K++D
Sbjct: 138 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDSELKILD 170
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 171 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 231 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 271
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 272 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 314

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 152/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 34  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 84
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 85  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 141
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + + S +K++D
Sbjct: 142 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDSELKILD 174
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 175 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 235 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 275
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 276 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 318

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 144/339 (42%), Gaps = 62/339 (18%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA--------KHD 100
           +++G G +G V +  D      VA+K VR          + I  ++++A        +H 
Sbjct: 15  AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHP 74
Query: 101 ---KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
              +  + C   R   D    + +VFE +   L  +L K      P + ++++ RQ L  
Sbjct: 75  NVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 132
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + F+H  C++H DLKPEN+L+ S   +K+ D+  +    +  SY   +            
Sbjct: 133 LDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA----RIYSYQMAL------------ 176
Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
                      +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +   + 
Sbjct: 177 ---------TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 227
Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRLQNLIMQ 336
           L  +  ++G  P+                   DWP   +  R +     + PR    ++ 
Sbjct: 228 LGKIFDLIGLPPED------------------DWPRDVSLPRGAFPP--RGPRPVQSVVP 267
Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
            ++ S      LL  +L ++P  R++A  AL+H +  +D
Sbjct: 268 EMEESGA---QLLLEMLTFNPHKRISAFRALQHSYLHKD 303

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++         D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD---DHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDXELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 33  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 82
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 83  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 143 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 176
Query: 221 Y---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 177 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 235
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 236 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 273
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 274 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 315

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 156
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 217 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 250
Query: 221 Y---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 251 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 309
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 310 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 347
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 348 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 389

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 111
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 172 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 205
Query: 221 Y---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 206 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 264
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 265 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 302
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 303 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 344

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 66  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 115
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 176 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 209
Query: 221 Y---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 210 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 268
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 269 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 306
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 307 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 348

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 64  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 113
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 174 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 207
Query: 221 Y---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 208 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 266
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 267 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 304
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 305 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 346

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 FGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 56  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 105
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 166 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 199
Query: 221 Y---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 200 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 258
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 259 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 296
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 297 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 338

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 FGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 24  SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 74
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 131
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 132 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 164
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 165 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 225 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKMN--- 265
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 266 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 308

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 24  SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 74
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++         D V+ +  Q+L
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQIL 131
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 132 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 164
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 165 FGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 225 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKMN--- 265
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 266 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 308

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 157/350 (44%), Gaps = 72/350 (20%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++    G+GTFG V    ++     VAIK V    ++R     E++++Q LA        
Sbjct: 26  QVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR---ELQIMQDLAVLHHPN-- 80
Query: 106 CVQIRNWF------DYRN-HICIVFEKLGSSLYDFLRKNNYR---SFPIDLVREIARQLL 155
            VQ++++F      D R+ ++ +V E +  +L+   R N YR   + P  L++    QL+
Sbjct: 81  IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCR-NYYRRQVAPPPILIKVFLFQLI 139
Query: 156 ECIAFMH--DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 213
             I  +H   + + H D+KP NVL+  ++                            +K+
Sbjct: 140 RSIGCLHLPSVNVCHRDIKPHNVLVNEAD--------------------------GTLKL 173
Query: 214 IDFGST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 269
            DFGS    +   P+  YI S R+YRAPE+I G   +T   DIWSVGCI  E+  GE +F
Sbjct: 174 CDFGSAKKLSPSEPNVAYICS-RYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF 232
Query: 270 QTHENLEHLAMMERVLGPLPQHMLKRVD---RHAEKYVRRGRLDWPEGAASRESIKSVMK 326
           +   +   L  + RVLG   + +L++++      + Y  +G + W               
Sbjct: 233 RGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKG-IPW--------------- 276
Query: 327 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                N+   H    A +   LL  LL+Y P +R+   EAL HP+F   H
Sbjct: 277 ----SNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++         D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD---DHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 41  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 90
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 91  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 151 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 184
Query: 221 Y---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 185 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 243
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 244 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 281
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 282 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 323

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 48  SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 98
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 99  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 155
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 156 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 188
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 189 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 249 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKMN--- 289
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 290 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 332

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 77
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 219
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 138 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 171
Query: 220 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 172 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 268
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 310

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 47  SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 97
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 98  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 154
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 155 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 187
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 188 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 248 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKMN--- 288
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 289 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 331

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 34  SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 84
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 85  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 141
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 142 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 174
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 175 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 235 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKMN--- 275
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 276 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 318

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 FGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 155/346 (44%), Gaps = 41/346 (11%)
Query: 35  ITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEV 92
           I Y + S F  ++ S +GEG +G V     +   E+VAIK +    K  +    + EI++
Sbjct: 5   IVYNISSDF--QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 93  LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR 152
           L+     +      +Q  + F+  N + I+ E + + L+   R  + +    D ++    
Sbjct: 63  LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIY 119
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q L  +  +H   +IH DLKP N+L+ S+  +KV D+              R+   SA  
Sbjct: 120 QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFG-----------LARIIDESAA- 167
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQT 271
             D    T ++      V+TR YRAPEV+L    ++   D+WS GCIL EL     +F  
Sbjct: 168 --DNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225
Query: 272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 331
            +    L ++  ++G            H++  +R       E   +RE IKS+   P   
Sbjct: 226 RDYRHQLLLIFGIIG----------TPHSDNDLR-----CIESPRAREYIKSLPMYPAAP 270
Query: 332 -NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
              +   V+    DL   LQ +L +DP  R+TA+EAL HP+    H
Sbjct: 271 LEKMFPRVNPKGIDL---LQRMLVFDPAKRITAKEALEHPYLQTYH 313

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 48  SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 98
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 99  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 155
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 156 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 188
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 189 FGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 249 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKMN--- 289
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 290 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 332

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 24  SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 74
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++         D V+ +  Q+L
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTD---DHVQFLIYQIL 131
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 132 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 164
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 165 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 225 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKMN--- 265
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 266 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 308

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 155/346 (44%), Gaps = 41/346 (11%)
Query: 35  ITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEV 92
           I Y + S F  ++ S +GEG +G V     +   E+VAIK +    K  +    + EI++
Sbjct: 5   IVYNISSDF--QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 93  LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR 152
           L+     +      +Q  + F+  N + I+ E + + L+   R  + +    D ++    
Sbjct: 63  LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIY 119
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q L  +  +H   +IH DLKP N+L+ S+  +KV D+              R+   SA  
Sbjct: 120 QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFG-----------LARIIDESAA- 167
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQT 271
             D    T ++      V+TR YRAPEV+L    ++   D+WS GCIL EL     +F  
Sbjct: 168 --DNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225
Query: 272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 331
            +    L ++  ++G            H++  +R       E   +RE IKS+   P   
Sbjct: 226 RDYRHQLLLIFGIIG----------TPHSDNDLR-----CIESPRAREYIKSLPMYPAAP 270
Query: 332 -NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
              +   V+    DL   LQ +L +DP  R+TA+EAL HP+    H
Sbjct: 271 LEKMFPRVNPKGIDL---LQRMLVFDPAKRITAKEALEHPYLQTYH 313

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 25  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 75
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 76  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 132
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 133 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 165
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 166 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 225
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 226 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 266
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 267 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 309

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 24  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 74
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++         D V+ +  Q+L
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQIL 131
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 132 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 164
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 165 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 225 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 265
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 266 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 308

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 39  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 89
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 90  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 146
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 147 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDXELKILD 179
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 180 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 239
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 240 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 280
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 281 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 323

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 33  SPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 83
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 84  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 140
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 141 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDXELKILD 173
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 174 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 234 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 274
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 275 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 317

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 149/344 (43%), Gaps = 75/344 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    +A+K        I+   + YRE          +L KH 
Sbjct: 57  SPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 107
Query: 101 KGGNRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQL 154
           K  N  + + + F      +  N + +V   +G+ L + ++    +    D V+ +  Q+
Sbjct: 108 KHEN-VIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQI 163
Query: 155 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
           L  + ++H   +IH DLKP N+ +                            +   +K++
Sbjct: 164 LRGLKYIHSADIIHRDLKPSNLAVN---------------------------EDCELKIL 196
Query: 215 DFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 273
           DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   +
Sbjct: 197 DFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTD 256
Query: 274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 333
           ++  L  + R+ G  P  ++ R+  H                 +R  I S+ ++P+    
Sbjct: 257 HINQLQQIMRLTGTPPASVISRMPSH----------------EARNYINSLPQMPKRN-- 298
Query: 334 IMQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
               V   A  L   LL+ +L  D   R+TA EAL HP+F++ H
Sbjct: 299 -FADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYH 341

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 FGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 26  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 76
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 77  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 133
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 134 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 166
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 167 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 226
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 227 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 267
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 310

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 35  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 85
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 86  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 142
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 143 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 175
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 176 FGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 236 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 276
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 277 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 33  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 83
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 84  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 140
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 141 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 173
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 174 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 234 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 274
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 275 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 317

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 35  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 85
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 86  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 142
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 143 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 175
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 176 FGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 236 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 276
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 277 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++         D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 35  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 85
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 86  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 142
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 143 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 175
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 176 FGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 236 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 276
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 277 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 33  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 83
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 84  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 140
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 141 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDXELKILD 173
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 174 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 234 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 274
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 275 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 317

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 25  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 75
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++         D V+ +  Q+L
Sbjct: 76  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQIL 132
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 133 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 165
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 166 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 225
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 226 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 266
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 267 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 309

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 30  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 80
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 81  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 137
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 138 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 170
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 171 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 231 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 271
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 272 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 314

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 35  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 85
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 86  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 142
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 143 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 175
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 176 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 236 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 276
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 277 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 34  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 84
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 85  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 141
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 142 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 174
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 175 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 235 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 275
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 276 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 318

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 51  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 101
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 158
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 159 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 191
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 192 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 251
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 252 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 292
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 293 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 335

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 40  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYREL---------RLLKHM 90
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 91  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 147
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 148 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 180
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 181 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 241 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 281
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 282 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 324

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 40  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 90
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 91  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 147
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 148 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 180
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 181 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 241 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 281
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 282 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 324

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 40  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 90
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 91  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 147
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 148 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 180
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 181 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 241 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 281
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 282 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 324

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 30  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 80
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 81  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 137
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 138 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 170
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 171 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 231 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 271
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 272 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 314

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 39  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 89
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 90  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 146
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 147 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 179
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 180 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 239
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 240 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 280
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 281 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 323

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 155/346 (44%), Gaps = 41/346 (11%)
Query: 35  ITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEV 92
           I Y + S F  ++ S +GEG +G V     +   E+VAIK +    K  +    + EI++
Sbjct: 5   IVYNISSDF--QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 93  LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR 152
           L+     +      +Q  + F+  N + I+ E + + L+   R  + +    D ++    
Sbjct: 63  LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIY 119
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q L  +  +H   +IH DLKP N+L+ S+  +KV D+              R+   SA  
Sbjct: 120 QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFG-----------LARIIDESAA- 167
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQT 271
             D    T ++      V+TR YRAPEV+L    ++   D+WS GCIL EL     +F  
Sbjct: 168 --DNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225
Query: 272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 331
            +    L ++  ++G            H++  +R       E   +RE IKS+   P   
Sbjct: 226 RDYRHQLLLIFGIIG----------TPHSDNDLR-----CIESPRAREYIKSLPMYPAAP 270
Query: 332 -NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
              +   V+    DL   LQ +L +DP  R+TA+EAL HP+    H
Sbjct: 271 LEKMFPRVNPKGIDL---LQRMLVFDPAKRITAKEALEHPYLQTYH 313

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 144/334 (43%), Gaps = 59/334 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           +GEG +G V   +D  RK  VAIK +     + Y +  + EI++L +    +  G R + 
Sbjct: 51  IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 109 IRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
             +  +    + IV + + + LY  L+     +   D +     Q+L  + ++H   ++H
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSN---DHICYFLYQILRGLKYIHSANVLH 167
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DLKP N+L+ ++                             +K+ DFG      P+ ++
Sbjct: 168 RDLKPSNLLINTT---------------------------CDLKICDFGLARIADPEHDH 200
Query: 229 I------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
                  V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L  +
Sbjct: 201 TGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
Query: 282 ERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
             +LG   Q  L   ++  A  Y+        +   S+  +      P+         D 
Sbjct: 261 LGILGSPSQEDLNCIINMKARNYL--------QSLPSKTKVAWAKLFPK--------SDS 304
Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            A D   LL  +L ++P  R+T  EAL HP+  +
Sbjct: 305 KALD---LLDRMLTFNPNKRITVEEALAHPYLEQ 335

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 152/337 (45%), Gaps = 72/337 (21%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVR---------GIKKYREAAMIEIEVLQQLAKHDK 101
           +GEG F  V +  D+   ++VAIK ++         GI +    A+ EI++LQ+L+  + 
Sbjct: 18  LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINR---TALREIKLLQELSHPN- 73
Query: 102 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
                + + + F ++++I +VF+ + + L   ++ N+    P   ++      L+ + ++
Sbjct: 74  ----IIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTP-SHIKAYMLMTLQGLEYL 128
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 220
           H   ++H DLKP N+LL                            ++  +K+ DFG + +
Sbjct: 129 HQHWILHRDLKPNNLLL---------------------------DENGVLKLADFGLAKS 161
Query: 221 YERPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
           +  P++ Y   V TR YRAPE++ G   +    D+W+VGCIL EL           +L+ 
Sbjct: 162 FGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ 221
Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 337
           L  +   LG   +                    WP+      S+   +       + + H
Sbjct: 222 LTRIFETLGTPTEE------------------QWPDMC----SLPDYVTFKSFPGIPLHH 259
Query: 338 VDHSAG-DLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
           +  +AG DL  L+QGL  ++P  R+TA +AL+  +F+
Sbjct: 260 IFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 296

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 51  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 101
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 158
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 159 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 191
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 192 FGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 251
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 252 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 292
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 293 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 335

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 33  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 83
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 84  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 140
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 141 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 173
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 174 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 234 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 274
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 275 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 317

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 27  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 77
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 78  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 134
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 135 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 167
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 168 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 227
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 228 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 268
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 269 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 311

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K ++     E++++++L       + C  +R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKL-------DHCNIVR 77
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 219
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 138 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 171
Query: 220 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 172 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 268
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 310

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 34  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 84
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 85  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 141
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 142 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 174
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 175 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 235 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 275
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 276 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 318

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           + +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 38  APVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 88
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 89  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 145
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 146 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 178
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 179 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 238
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 239 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKMN--- 279
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 280 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 322

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 48  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 98
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 99  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 155
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 156 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 188
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 189 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 249 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 289
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 290 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 332

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 30  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 80
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 81  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 137
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 138 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 170
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 171 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 231 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 271
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 272 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 314

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 152/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+ +     +K+ DY  + HT  + + +             
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGY------------- 182
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
                         V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 183 --------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 47  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 97
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 98  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 154
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 155 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 187
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 188 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 248 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 288
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 289 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 331

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 157/342 (45%), Gaps = 78/342 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHDKGGNR-- 105
           +GEG++G V++C +++   +VAIK        K  ++ AM EI++L+QL +H+   N   
Sbjct: 33  VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHENLVNLLE 91
Query: 106 -CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR----QLLECIAF 160
            C + + W+       +VFE +  ++ D     +   FP  L  ++ +    Q++  I F
Sbjct: 92  VCKKKKRWY-------LVFEFVDHTILD-----DLELFPNGLDYQVVQKYLFQIINGIGF 139
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 219
            H   +IH D+KPEN+L+                            +S  +K+ DFG + 
Sbjct: 140 CHSHNIIHRDIKPENILV---------------------------SQSGVVKLCDFGFAR 172
Query: 220 TYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
           T   P + Y   V+TR YRAPE+++G + +    D+W++GC++ E+  GE LF    +++
Sbjct: 173 TLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID 232
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRR---GRLDWPEGAASRESIKSVMKLPRLQNL 333
            L  +   LG L       + RH E + +      +  PE    RE ++   + P+L  +
Sbjct: 233 QLYHIMMCLGNL-------IPRHQELFNKNPVFAGVRLPE-IKEREPLER--RYPKLSEV 282
Query: 334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
           ++            L +  L  DP  R    E L H FF  D
Sbjct: 283 VID-----------LAKKCLHIDPDKRPFCAELLHHDFFQMD 313

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 152/343 (44%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+ +     +K+ D+  + HT  + + +             
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGY------------- 182
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
                         V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 183 --------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 154/342 (45%), Gaps = 73/342 (21%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K ++     E++++++L       + C  +R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKL-------DHCNIVR 77
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 219
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 138 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 171
Query: 220 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 172 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++       +P+  A       V + PR       
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEFA------FPQIKA--HPWTKVFR-PR------- 274
Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
               +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 275 ----TPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 310

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L      +  G   
Sbjct: 31  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 91  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 147
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                           S +K+ DFG      PD 
Sbjct: 148 LHRDLKPSNLLLNTT---------------------------SDLKICDFGLARVADPDH 180
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 181 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 240
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 241 HILGILGSPSQEDLNCGINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 284
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 285 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLAQ 317

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 89
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 90  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 150 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 183
Query: 221 Y---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 184 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 242
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 243 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 280
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 281 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 322

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 111
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 172 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 205
Query: 221 Y---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 206 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 264
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 265 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 302
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 303 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 344

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 49  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + +V   +G+ LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 165
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 166 LHRDLKPSNLLLNTT---------------------------XDLKICDFGLARVADPDH 198
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 199 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 258
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 259 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 302
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 303 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 335

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 89
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 90  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 150 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 183
Query: 221 Y---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 184 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 242
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 243 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 280
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 281 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 322

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 47  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 96
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 97  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 157 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 190
Query: 221 Y---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 191 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 249
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 250 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 287
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 288 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 329

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 32  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 81
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 82  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 142 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 175
Query: 221 Y---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 176 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 234
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 235 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 272
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 273 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 314

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 77
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 138 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 171
Query: 221 Y---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 172 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 268
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 310

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 29  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 78
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 79  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 139 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 172
Query: 221 Y---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 173 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 231
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 232 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 269
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 270 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 311

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 36  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 85
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 86  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 146 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 179
Query: 221 Y---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 180 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 238
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 239 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 276
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 277 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 318

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 77
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 138 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 171
Query: 221 Y---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 172 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 268
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 310

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 153/329 (46%), Gaps = 54/329 (16%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G + +V E  +    E V +KI++ +KK       EI++L+ L    +GG   + +
Sbjct: 44  KLGRGKYSEVFEAINITNNEKVVVKILKPVKK--NKIKREIKILENL----RGGPNIITL 97
Query: 110 RNWFD--YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
            +           +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++
Sbjct: 98  ADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIM 153
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H D+KP NV+ +  E+ K                         +++ID+G   +  P Q 
Sbjct: 154 HRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEFYHPGQE 187
Query: 228 YIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMER 283
           Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +
Sbjct: 188 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
           VLG   + +   +D++  +   R           R S K   +    +N   QH+   + 
Sbjct: 248 VLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSP 295
Query: 344 DLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           +    L  LLRYD   RLTAREA+ HP+F
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 77
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 78  LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 219
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 138 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 171
Query: 220 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 172 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 268
Query: 337 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 310

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 143/333 (42%), Gaps = 57/333 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIK-IVRGIKK--YREAAMIEIEVLQQLAKHDK--GGNR 105
           +G G +G V    D      VAIK + R  +   + + A  E+ +L+ + +H+   G   
Sbjct: 33  VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLD 91
Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
                   D      +V   +G+ L   ++   +     D ++ +  Q+L+ + ++H   
Sbjct: 92  VFTPDETLDDFTDFYLVMPFMGTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAG 148
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IH DLKP N+ +                            +   +K++DFG       +
Sbjct: 149 IIHRDLKPGNLAV---------------------------NEDCELKILDFGLARQADSE 181
Query: 226 QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
               V TR YRAPEVIL  + +T   DIWSVGCI+ E+ TG+ LF+  ++L+ L  + +V
Sbjct: 182 MXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKV 241
Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
            G  P   ++R+     K   +G                   LP L+      +  +A  
Sbjct: 242 TGTPPAEFVQRLQSDEAKNYMKG-------------------LPELEKKDFASILTNASP 282
Query: 345 LT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
           L  +LL+ +L  D   R+TA EAL HP+F   H
Sbjct: 283 LAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 150/343 (43%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++ 
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILG 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 29  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 145
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 146 LHRDLKPSNLLLNTT---------------------------XDLKIXDFGLARVADPDH 178
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 179 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
Query: 280 MMERVLGPLPQHMLKR-VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 239 HILGILGSPSQEDLNXIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 282
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 283 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 33  SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIND 92
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 149
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 150 LHRDLKPSNLLLNTT---------------------------XDLKICDFGLARVADPDH 182
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 243 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 286
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 287 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 147/342 (42%), Gaps = 75/342 (21%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           +G G +G V   +D   ++ VA+K        ++   + YRE     + +L+ L   +  
Sbjct: 36  VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE-----LRLLKHLKHENVI 90
Query: 103 G-----NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
           G          I ++    + + +V   +G+ L + ++    ++   + V+ +  QLL  
Sbjct: 91  GLLDVFTPATSIEDF----SEVYLVTTLMGADLNNIVKS---QALSDEHVQFLVYQLLRG 143
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + ++H   +IH DLKP NV +                            + S ++++DFG
Sbjct: 144 LKYIHSAGIIHRDLKPSNVAV---------------------------NEDSELRILDFG 176
Query: 218 STTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                  +    V+TR YRAPE++L  + +    DIWSVGCI+ EL  G+ALF   + ++
Sbjct: 177 LARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYID 236
Query: 277 HLA-MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 335
            L  +ME V  P P+ + K    HA  Y++                     LP +    +
Sbjct: 237 QLKRIMEVVGTPSPEVLAKISSEHARTYIQ--------------------SLPPMPQKDL 276
Query: 336 QHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +   A  L   LL  +L  D   R++A EAL H +F++ H
Sbjct: 277 SSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYH 318

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 29  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 145
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 146 LHRDLKPSNLLLNTT---------------------------XDLKICDFGLARVADPDH 178
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 179 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
Query: 280 MMERVLGPLPQHMLKR-VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 239 HILGILGSPSQEDLNXIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 282
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 283 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 150/343 (43%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
            G   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 AGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 150/343 (43%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
            G   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 GGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 73/342 (21%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG V +    +  E+VAIK V   K ++     E++++++L       + C  +R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKL-------DHCNIVR 77
Query: 111 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 160
             +F Y +       ++ +V + + +++Y   R      ++ P+  V+    QL   +A+
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 219
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 138 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 171
Query: 220 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 172 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            L  + +VLG   +  ++ ++ +  ++       +P+  A       V + PR       
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEFA------FPQIKA--HPWTKVFR-PR------- 274
Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
               +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 275 ----TPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 310

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 94.4 bits (233), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 29  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 145
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 146 LHRDLKPSNLLLNTT---------------------------XDLKICDFGLARVADPDH 178
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 179 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 239 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 282
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 283 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 94.4 bits (233), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 150/343 (43%), Gaps = 73/343 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHD 100
           S +G G +G V   +D +    VA+K        I+   + YRE          +L KH 
Sbjct: 28  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------RLLKHM 78
Query: 101 KGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQIL 135
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 136 RGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKILD 168
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
            G   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 169 RGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L ++ R++G     +LK++                   ++R  I+S+ ++P++    
Sbjct: 229 IDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKMN--- 269
Query: 335 MQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 49  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 165
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 166 LHRDLKPSNLLLNTT---------------------------CDLKICDFGLARVADPDH 198
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 199 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 258
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 259 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 302
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 303 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 335

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 29  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 145
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 146 LHRDLKPSNLLLNTT---------------------------CDLKICDFGLARVADPDH 178
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 179 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 239 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 282
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 283 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 31  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 91  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 147
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 148 LHRDLKPSNLLLNTT---------------------------CDLKICDFGLARVADPDH 180
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 181 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 240
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 241 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 284
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 285 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 317

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 143/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L      +  G   
Sbjct: 31  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 91  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 147
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 148 LHRDLKPSNLLLNTT---------------------------CDLKICDFGLARVADPDH 180
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 181 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 240
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 241 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 284
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 285 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLAQ 317

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 147/342 (42%), Gaps = 75/342 (21%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           +G G +G V   +D   ++ VA+K        ++   + YRE     + +L+ L   +  
Sbjct: 36  VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE-----LRLLKHLKHENVI 90
Query: 103 G-----NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
           G          I ++    + + +V   +G+ L + ++    ++   + V+ +  QLL  
Sbjct: 91  GLLDVFTPATSIEDF----SEVYLVTTLMGADLNNIVK---CQALSDEHVQFLVYQLLRG 143
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + ++H   +IH DLKP NV +                            + S ++++DFG
Sbjct: 144 LKYIHSAGIIHRDLKPSNVAV---------------------------NEDSELRILDFG 176
Query: 218 STTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                  +    V+TR YRAPE++L  + +    DIWSVGCI+ EL  G+ALF   + ++
Sbjct: 177 LARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYID 236
Query: 277 HLA-MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 335
            L  +ME V  P P+ + K    HA  Y++                     LP +    +
Sbjct: 237 QLKRIMEVVGTPSPEVLAKISSEHARTYIQ--------------------SLPPMPQKDL 276
Query: 336 QHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +   A  L   LL  +L  D   R++A EAL H +F++ H
Sbjct: 277 SSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYH 318

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 33  SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 149
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 150 LHRDLKPSNLLLNTT---------------------------CDLKICDFGLARVADPDH 182
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 183 DHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 243 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 286
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 287 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 34  SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 94  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 150
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 151 LHRDLKPSNLLLNTT---------------------------CDLKICDFGLARVADPDH 183
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 184 DHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 243
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 244 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 287
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 288 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 320

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 37  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 97  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 153
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 154 LHRDLKPSNLLLNTT---------------------------CDLKICDFGLARVADPDH 186
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 187 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 246
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 247 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 290
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 291 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 323

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 29  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 145
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 146 LHRDLKPSNLLLNTT---------------------------CDLKICDFGLARVADPDH 178
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 179 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 239 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 282
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 283 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 33  SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 149
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 150 LHRDLKPSNLLLNTT---------------------------XDLKICDFGLARVADPDH 182
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 243 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 286
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 287 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 27  SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 87  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 143
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 144 LHRDLKPSNLLLNTT---------------------------CDLKICDFGLARVADPDH 176
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 177 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 236
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 237 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 280
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 281 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 313

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 34  SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 94  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 150
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 151 LHRDLKPSNLLLNTT---------------------------CDLKICDFGLARVADPDH 183
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 184 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 243
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 244 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 287
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 288 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 320

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 35  SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 94
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 95  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 151
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 152 LHRDLKPSNLLLNTT---------------------------CDLKICDFGLARVADPDH 184
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 185 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 244
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 245 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 288
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 289 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 321

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 26  SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 85
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 86  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 142
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 143 LHRDLKPSNLLLNTT---------------------------CDLKICDFGLARVADPDH 175
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 176 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 235
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 236 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 279
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 280 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 312

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 33  SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 149
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 150 LHRDLKPSNLLLNTT---------------------------CDLKICDFGLARVADPDH 182
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 243 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 286
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 287 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 27  SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 87  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 143
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 144 LHRDLKPSNLLLNTT---------------------------CDLKICDFGLARVADPDH 176
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 177 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 236
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 237 HILGILGSPEQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 280
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 281 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 313

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 148/337 (43%), Gaps = 71/337 (21%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  +RE  E+VA+K VR     +    +A+ EI +L++L KH       
Sbjct: 9   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KH----KNI 63
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +       + +VFE     L  +    N    P ++V+    QLL+ + F H   +
Sbjct: 64  VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGFCHSRNV 122
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP+N+L+  +  +K+ ++               + ++  I V  + +        
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFG--------------LARAFGIPVRCYSAE------- 161
Query: 227 NYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERV 284
              V T  YR P+V+ G   ++   D+WS GCI  EL   G  LF  ++  + L  + R+
Sbjct: 162 ---VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL 218
Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
           LG                              + E   S+ KLP  +   M     S  +
Sbjct: 219 LG----------------------------TPTEEQWPSMTKLPDYKPYPMYPATTSLVN 250
Query: 345 LT--------HLLQGLLRYDPTDRLTAREALRHPFFT 373
           +          LLQ LL+ +P  R++A EAL+HP+F+
Sbjct: 251 VVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 147/337 (43%), Gaps = 71/337 (21%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEGT+G V +  +RE  E+VA+K VR     +    +A+ EI +L++L KH       
Sbjct: 9   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KH----KNI 63
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++ +       + +VFE     L  +    N    P ++V+    QLL+ + F H   +
Sbjct: 64  VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGFCHSRNV 122
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP+N+L+  +  +K+ D+               + ++  I V  + +        
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFG--------------LARAFGIPVRCYSAE------- 161
Query: 227 NYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGE-ALFQTHENLEHLAMMERV 284
              V T  YR P+V+ G   ++   D+WS GCI  EL      LF  ++  + L  + R+
Sbjct: 162 ---VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRL 218
Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
           L                            G  + E   S+ KLP  +   M     S  +
Sbjct: 219 L----------------------------GTPTEEQWPSMTKLPDYKPYPMYPATTSLVN 250
Query: 345 LT--------HLLQGLLRYDPTDRLTAREALRHPFFT 373
           +          LLQ LL+ +P  R++A EAL+HP+F+
Sbjct: 251 VVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    +  G   
Sbjct: 33  SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSN---DHICYFLYQILRGLKYIHSANV 149
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 150 LHRDLKPSNLLLNTT---------------------------CDLKICDFGLARVADPDH 182
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 243 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 286
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 287 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC 106
           S +GEG +G V   +D   K  VAI+ +     + Y +  + EI++L +    +  G   
Sbjct: 33  SYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++H   +
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANV 149
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKP N+LL ++                             +K+ DFG      PD 
Sbjct: 150 LHRDLKPSNLLLNTT---------------------------CDLKICDFGLARVADPDH 182
Query: 227 NYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L 
Sbjct: 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
Query: 280 MMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG   Q  L   ++  A  Y+               S+    K+P   N +  + 
Sbjct: 243 HILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNRLFPNA 286
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 287 DSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 152/337 (45%), Gaps = 61/337 (18%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHDKGGN 104
           +K+GEGT+G+V +  D    E VAIK +R ++   E     A+ E+ +L++L   +    
Sbjct: 40  TKLGEGTYGEVYKAIDTVTNETVAIKRIR-LEHEEEGVPGTAIREVSLLKELQHRN---- 94
Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
             +++++   + + + ++FE   + L  ++ KN   S  + +++    QL+  + F H  
Sbjct: 95  -IIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVS--MRVIKSFLYQLINGVNFCHSR 151
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYER 223
             +H DLKP+N+LL  S+  + P                       +K+ DFG +  +  
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETP----------------------VLKIGDFGLARAFGI 189
Query: 224 PDQNYI--VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
           P + +   + T  YR PE++LG   ++   DIWS+ CI  E+     LF     ++ L  
Sbjct: 190 PIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK 249
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV-- 338
           +  VLG LP                     WP   A  +  +S    P+ +   ++ V  
Sbjct: 250 IFEVLG-LPDDT-----------------TWPGVTALPDWKQS---FPKFRGKTLKRVLG 288
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                +   LL  +L  DP  R++A+ AL HP+F+ +
Sbjct: 289 ALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN 325

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 146/342 (42%), Gaps = 75/342 (21%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           +G G +G V   +D   ++ VA+K        ++   + YRE     + +L+ L   +  
Sbjct: 28  VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE-----LRLLKHLKHENVI 82
Query: 103 G-----NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
           G          I ++    + + +V   +G+ L + ++    ++   + V+ +  QLL  
Sbjct: 83  GLLDVFTPATSIEDF----SEVYLVTTLMGADLNNIVK---CQALSDEHVQFLVYQLLRG 135
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + ++H   +IH DLKP NV +                            +   ++++DFG
Sbjct: 136 LKYIHSAGIIHRDLKPSNVAV---------------------------NEDCELRILDFG 168
Query: 218 STTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                  +    V+TR YRAPE++L  + +    DIWSVGCI+ EL  G+ALF   + ++
Sbjct: 169 LARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYID 228
Query: 277 HLA-MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 335
            L  +ME V  P P+ + K    HA  Y++                     LP +    +
Sbjct: 229 QLKRIMEVVGTPSPEVLAKISSEHARTYIQ--------------------SLPPMPQKDL 268
Query: 336 QHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +   A  L   LL  +L  D   R++A EAL H +F++ H
Sbjct: 269 SSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYH 310

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 137/316 (43%), Gaps = 76/316 (24%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +GEG+F    +C  ++  +  A+KI+   K+       EI  L+    H       V++ 
Sbjct: 19  LGEGSFSICRKCVHKKSNQAFAVKIIS--KRMEANTQKEITALKLCEGHP----NIVKLH 72
Query: 111 NWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHT 169
             F  + H  +V E L G  L++ ++K  +  F       I R+L+  ++ MHD+ ++H 
Sbjct: 73  EVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 170 DLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI 229
           DLKPEN+L          D   +L                 IK+IDFG    + PD   +
Sbjct: 131 DLKPENLLFT--------DENDNLE----------------IKIIDFGFARLKPPDNQPL 166
Query: 230 VS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE-NLEHLAMMERVL 285
            +   T HY APE++   G+   CD+WS+G IL  + +G+  FQ+H+ +L   + +E + 
Sbjct: 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM- 225
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                           K +++G   + EG A                   ++V   A D 
Sbjct: 226 ----------------KKIKKGDFSF-EGEA------------------WKNVSQEAKD- 249
Query: 346 THLLQGLLRYDPTDRL 361
             L+QGLL  DP  RL
Sbjct: 250 --LIQGLLTVDPNKRL 263

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 160/347 (46%), Gaps = 89/347 (25%)
Query: 43  FADKIHSK--MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKY--REAAMIEIEVLQQL 96
           F+D+   +  +G+G+FG+V+ C D+   +  A+K++  R +K+   +E+ + E+++L+QL
Sbjct: 48  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 97  AKHDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
              +      +++  +F+ + +  +V E   G  L+D +     R   +D  R I RQ+L
Sbjct: 108 DHPN-----IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAAR-IIRQVL 160
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             I +MH   ++H DLKPEN+LL S                          K + I++ID
Sbjct: 161 SGITYMHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 196
Query: 216 FGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
           FG +T+    +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F    
Sbjct: 197 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 252
Query: 274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 333
                       G     +LK+V++                       K   +LP+ +  
Sbjct: 253 ------------GANEYDILKKVEKG----------------------KYTFELPQWKK- 277
Query: 334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF---FTRDHL 377
               V  SA D   L++ +L Y P+ R++AR+AL H +   +T++ +
Sbjct: 278 ----VSESAKD---LIRKMLTYVPSMRISARDALDHEWIQTYTKEQI 317

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 160/347 (46%), Gaps = 89/347 (25%)
Query: 43  FADKIHSK--MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKY--REAAMIEIEVLQQL 96
           F+D+   +  +G+G+FG+V+ C D+   +  A+K++  R +K+   +E+ + E+++L+QL
Sbjct: 47  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 97  AKHDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
              +      +++  +F+ + +  +V E   G  L+D +     R   +D  R I RQ+L
Sbjct: 107 DHPN-----IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAAR-IIRQVL 159
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             I +MH   ++H DLKPEN+LL S                          K + I++ID
Sbjct: 160 SGITYMHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 195
Query: 216 FGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
           FG +T+    +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F    
Sbjct: 196 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 251
Query: 274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 333
                       G     +LK+V++                       K   +LP+ +  
Sbjct: 252 ------------GANEYDILKKVEKG----------------------KYTFELPQWKK- 276
Query: 334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF---FTRDHL 377
               V  SA D   L++ +L Y P+ R++AR+AL H +   +T++ +
Sbjct: 277 ----VSESAKD---LIRKMLTYVPSMRISARDALDHEWIQTYTKEQI 316

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 155/338 (45%), Gaps = 86/338 (25%)
Query: 43  FADKIHSK--MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKY--REAAMIEIEVLQQL 96
           F+D+   +  +G+G+FG+V+ C D+   +  A+K++  R +K+   +E+ + E+++L+QL
Sbjct: 24  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 97  AKHDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
              +      +++  +F+ + +  +V E   G  L+D +     R   +D  R I RQ+L
Sbjct: 84  DHPN-----IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAAR-IIRQVL 136
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             I +MH   ++H DLKPEN+LL S                          K + I++ID
Sbjct: 137 SGITYMHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 172
Query: 216 FGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
           FG +T+    +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F    
Sbjct: 173 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 228
Query: 274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 333
                       G     +LK+V++                       K   +LP+ +  
Sbjct: 229 ------------GANEYDILKKVEKG----------------------KYTFELPQWKK- 253
Query: 334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
               V  SA D   L++ +L Y P+ R++AR+AL H +
Sbjct: 254 ----VSESAKD---LIRKMLTYVPSMRISARDALDHEW 284

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 156/340 (45%), Gaps = 86/340 (25%)
Query: 41  SAFADKIHSK--MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKY--REAAMIEIEVLQ 94
           + F+D+   +  +G+G+FG+V+ C D+   +  A+K++  R +K+   +E+ + E+++L+
Sbjct: 28  AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 95  QLAKHDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQ 153
           QL   +      +++  +F+ + +  +V E   G  L+D +     R   +D  R I RQ
Sbjct: 88  QLDHPN-----IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAAR-IIRQ 140
Query: 154 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 213
           +L  I +MH   ++H DLKPEN+LL S                          K + I++
Sbjct: 141 VLSGITYMHKNKIVHRDLKPENLLLESK------------------------SKDANIRI 176
Query: 214 IDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           IDFG +T+    +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F  
Sbjct: 177 IDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN- 234
Query: 272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 331
                         G     +LK+V++                       K   +LP+ +
Sbjct: 235 --------------GANEYDILKKVEKG----------------------KYTFELPQWK 258
Query: 332 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                 V  SA D   L++ +L Y P+ R++AR+AL H +
Sbjct: 259 K-----VSESAKD---LIRKMLTYVPSMRISARDALDHEW 290

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 143/328 (43%), Gaps = 56/328 (17%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA----MIEIEVLQQLAKHDKGGNR 105
           K+GEGT+  V +   +    +VA+K +R   ++ E A    + E+ +L+ L KH      
Sbjct: 9   KLGEGTYATVYKGKSKLTDNLVALKEIR--LEHEEGAPCTAIREVSLLKDL-KH----AN 61
Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            V + +       + +VFE L   L  +L  +      +  V+    QLL  +A+ H   
Sbjct: 62  IVTLHDIIHTEKSLTLVFEYLDKDLKQYL-DDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           ++H DLKP+N+L+     +K+ D+               + ++ +I      + TY+   
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFG--------------LARAKSIP-----TKTYDNE- 160
Query: 226 QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
               V T  YR P+++LG   ++   D+W VGCI  E+ TG  LF      E L  + R+
Sbjct: 161 ----VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRI 216
Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
           LG   +                    WP G  S E  K+          ++ H      D
Sbjct: 217 LGTPTEET------------------WP-GILSNEEFKTYNYPKYRAEALLSHAPRLDSD 257
Query: 345 LTHLLQGLLRYDPTDRLTAREALRHPFF 372
              LL  LL+++  +R++A +A++HPFF
Sbjct: 258 GADLLTKLLQFEGRNRISAEDAMKHPFF 285

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 149/348 (42%), Gaps = 89/348 (25%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHDKGGNR 105
           K+GEGT+G V +  +    E  A+K +R ++K  E      + EI +L++L KH    + 
Sbjct: 9   KIGEGTYGVVYKAQNN-YGETFALKKIR-LEKEDEGIPSTTIREISILKEL-KH----SN 61
Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAFMHD 163
            V++ +    +  + +VFE L   L   L   +    S      +    QLL  IA+ HD
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCHD 118
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYE 222
             ++H DLKP+N+L+                            +   +K+ DFG +  + 
Sbjct: 119 RRVLHRDLKPQNLLI---------------------------NREGELKIADFGLARAFG 151
Query: 223 RPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
            P + Y   V T  YRAP+V++G   ++   DIWSVGCI  E+  G  LF      + L 
Sbjct: 152 IPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLM 211
Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-------- 331
            + R+LG  P                    +WP          +V +LP+          
Sbjct: 212 RIFRILG-TPNSK-----------------NWP----------NVTELPKYDPNFTVYEP 243
Query: 332 ---NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                 ++ +D S  D   LL  +L+ DP  R+TA++AL H +F  ++
Sbjct: 244 LPWESFLKGLDESGID---LLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 148/348 (42%), Gaps = 89/348 (25%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHDKGGNR 105
           K+GEGT+G V +  +    E  A+K +R ++K  E      + EI +L++L KH    + 
Sbjct: 9   KIGEGTYGVVYKAQNN-YGETFALKKIR-LEKEDEGIPSTTIREISILKEL-KH----SN 61
Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAFMHD 163
            V++ +    +  + +VFE L   L   L   +    S      +    QLL  IA+ HD
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCHD 118
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYE 222
             ++H DLKP+N+L+                            +   +K+ DFG +  + 
Sbjct: 119 RRVLHRDLKPQNLLI---------------------------NREGELKIADFGLARAFG 151
Query: 223 RPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
            P + Y   V T  YRAP+V++G   ++   DIWSVGCI  E+  G  LF      + L 
Sbjct: 152 IPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM 211
Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-------- 331
            + R+LG                       +WP          +V +LP+          
Sbjct: 212 RIFRILG------------------TPNSKNWP----------NVTELPKYDPNFTVYEP 243
Query: 332 ---NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                 ++ +D S  D   LL  +L+ DP  R+TA++AL H +F  ++
Sbjct: 244 LPWESFLKGLDESGID---LLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 148/348 (42%), Gaps = 89/348 (25%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHDKGGNR 105
           K+GEGT+G V +  +    E  A+K +R ++K  E      + EI +L++L KH    + 
Sbjct: 9   KIGEGTYGVVYKAQNN-YGETFALKKIR-LEKEDEGIPSTTIREISILKEL-KH----SN 61
Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAFMHD 163
            V++ +    +  + +VFE L   L   L   +    S      +    QLL  IA+ HD
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCHD 118
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYE 222
             ++H DLKP+N+L+                            +   +K+ DFG +  + 
Sbjct: 119 RRVLHRDLKPQNLLI---------------------------NREGELKIADFGLARAFG 151
Query: 223 RPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
            P + Y   + T  YRAP+V++G   ++   DIWSVGCI  E+  G  LF      + L 
Sbjct: 152 IPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM 211
Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-------- 331
            + R+LG                       +WP          +V +LP+          
Sbjct: 212 RIFRILG------------------TPNSKNWP----------NVTELPKYDPNFTVYEP 243
Query: 332 ---NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                 ++ +D S  D   LL  +L+ DP  R+TA++AL H +F  ++
Sbjct: 244 LPWESFLKGLDESGID---LLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 145/330 (43%), Gaps = 83/330 (25%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV-RGIKKYREAAMI--EIEVLQQLAKHDKGGNRCV 107
           +G+G+FG+VL+C DR  ++  A+K++ +   K ++ + I  E+E+L++L   +      +
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN-----IM 84
Query: 108 QIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++    +  +   IV E   G  L+D + K   + F       I +Q+   I +MH   +
Sbjct: 85  KLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKPEN+LL S E                        K   IK+IDFG ST +++  
Sbjct: 143 VHRDLKPENILLESKE------------------------KDCDIKIIDFGLSTCFQQNT 178
Query: 226 Q-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
           +    + T +Y APEV+ G  +   CD+WS G IL  L +G   F               
Sbjct: 179 KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF--------------- 222
Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
            G     +LKRV                      E+ K    LP+ + +        + D
Sbjct: 223 YGKNEYDILKRV----------------------ETGKYAFDLPQWRTI--------SDD 252
Query: 345 LTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
              L++ +L + P+ R+TA + L HP+  +
Sbjct: 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 88.6 bits (218), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 168/374 (44%), Gaps = 69/374 (18%)
Query: 19  TMALRNRVLMCNMFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG 78
           ++A +N  L+      +T+ V   +  +I   +G G +G V     R   + VAIK +  
Sbjct: 32  SVAAKNLALLKARSFDVTFDVGDEY--EIIETIGNGAYGVVSSARRRLTGQQVAIKKIPN 89
Query: 79  ---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN-------WFDYRNHICIVFEKLGS 128
              +    +  + E+++L+   KHD      + I++       + ++++ + +V + + S
Sbjct: 90  AFDVVTNAKRTLRELKILKHF-KHDN----IIAIKDILRPTVPYGEFKS-VYVVLDLMES 143
Query: 129 SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD 188
            L+  +  +  +   ++ VR    QLL  + +MH   +IH DLKP N+L+  +  +K+ D
Sbjct: 144 DLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGD 201
Query: 189 Y---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL- 244
           +   +    +P +  YF                T Y        V+TR YRAPE++L L 
Sbjct: 202 FGMARGLCTSPAEHQYFM---------------TEY--------VATRWYRAPELMLSLH 238
Query: 245 GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYV 304
            +T   D+WSVGCI  E+     LF     +  L ++  VLG     +++ V        
Sbjct: 239 EYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV-------- 290
Query: 305 RRGRLDWPEGAASRESIKS-VMKLPRLQNLIMQHVDHSAG-DLTHLLQGLLRYDPTDRLT 362
                    GA   E +++ +  LP  Q +  + V   A      LL  +LR++P+ R++
Sbjct: 291 ---------GA---ERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARIS 338
Query: 363 AREALRHPFFTRDH 376
           A  ALRHPF  + H
Sbjct: 339 AAAALRHPFLAKYH 352

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 88.2 bits (217), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 145/330 (43%), Gaps = 83/330 (25%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV-RGIKKYREAAMI--EIEVLQQLAKHDKGGNRCV 107
           +G+G+FG+VL+C DR  ++  A+K++ +   K ++ + I  E+E+L++L   +      +
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN-----IM 84
Query: 108 QIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++    +  +   IV E   G  L+D + K   + F       I +Q+   I +MH   +
Sbjct: 85  KLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKPEN+LL S E                        K   IK+IDFG ST +++  
Sbjct: 143 VHRDLKPENILLESKE------------------------KDCDIKIIDFGLSTCFQQNT 178
Query: 226 Q-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
           +    + T +Y APEV+ G  +   CD+WS G IL  L +G   F               
Sbjct: 179 KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF--------------- 222
Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
            G     +LKRV                      E+ K    LP+ + +        + D
Sbjct: 223 YGKNEYDILKRV----------------------ETGKYAFDLPQWRTI--------SDD 252
Query: 345 LTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
              L++ +L + P+ R+TA + L HP+  +
Sbjct: 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 168/373 (45%), Gaps = 67/373 (17%)
Query: 19  TMALRNRVLMCNMFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG 78
           ++A +N  L+      +T+ V   +  +I   +G G +G V     R   + VAIK +  
Sbjct: 33  SVAAKNLALLKARSFDVTFDVGDEY--EIIETIGNGAYGVVSSARRRLTGQQVAIKKIPN 90
Query: 79  ---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN-------WFDYRNHICIVFEKLGS 128
              +    +  + E+++L+   KHD      + I++       + ++++ + +V + + S
Sbjct: 91  AFDVVTNAKRTLRELKILKHF-KHDN----IIAIKDILRPTVPYGEFKS-VYVVLDLMES 144
Query: 129 SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD 188
            L+  +  +  +   ++ VR    QLL  + +MH   +IH DLKP N+L+  +  +K+ D
Sbjct: 145 DLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGD 202
Query: 189 Y---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL- 244
           +   +    +P +  YF                T Y        V+TR YRAPE++L L 
Sbjct: 203 FGMARGLCTSPAEHQYFM---------------TEY--------VATRWYRAPELMLSLH 239
Query: 245 GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYV 304
            +T   D+WSVGCI  E+     LF     +  L ++  VLG     +++ V   AE+  
Sbjct: 240 EYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG--AERV- 296
Query: 305 RRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG-DLTHLLQGLLRYDPTDRLTA 363
                        R  I+S   LP  Q +  + V   A      LL  +LR++P+ R++A
Sbjct: 297 -------------RAYIQS---LPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISA 340
Query: 364 REALRHPFFTRDH 376
             ALRHPF  + H
Sbjct: 341 AAALRHPFLAKYH 353

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 145/330 (43%), Gaps = 83/330 (25%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV-RGIKKYREAAMI--EIEVLQQLAKHDKGGNRCV 107
           +G+G+FG+VL+C DR  ++  A+K++ +   K ++ + I  E+E+L++L   +      +
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN-----IM 84
Query: 108 QIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++    +  +   IV E   G  L+D + K   + F       I +Q+   I +MH   +
Sbjct: 85  KLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DLKPEN+LL S E                        K   IK+IDFG ST +++  
Sbjct: 143 VHRDLKPENILLESKE------------------------KDCDIKIIDFGLSTCFQQNT 178
Query: 226 Q-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
           +    + T +Y APEV+ G  +   CD+WS G IL  L +G   F               
Sbjct: 179 KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF--------------- 222
Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
            G     +LKRV                      E+ K    LP+ + +        + D
Sbjct: 223 YGKNEYDILKRV----------------------ETGKYAFDLPQWRTI--------SDD 252
Query: 345 LTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
              L++ +L + P+ R+TA + L HP+  +
Sbjct: 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 121/261 (46%), Gaps = 37/261 (14%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           +G G FGQV +C +      +A KI+  RG+K  +E    EI V+ QL   +      +Q
Sbjct: 97  LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD-KEEVKNEISVMNQLDHAN-----LIQ 150
Query: 109 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           + + F+ +N I +V E + G  L+D +   +Y    +D +    +Q+ E I  MH + ++
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL-FMKQICEGIRHMHQMYIL 209
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DLKPEN+L V+ +                         +  IK+IDFG     +P + 
Sbjct: 210 HLDLKPENILCVNRD-------------------------AKQIKIIDFGLARRYKPREK 244
Query: 228 YIVS--TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
             V+  T  + APEV+     ++P D+WSVG I   L +G + F    + E L  +    
Sbjct: 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACR 304
Query: 286 GPLPQHMLKRVDRHAEKYVRR 306
             L     + +   A++++ +
Sbjct: 305 WDLEDEEFQDISEEAKEFISK 325

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 155/349 (44%), Gaps = 36/349 (10%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMI--EIEVLQQLAKHDKGGNRCV 107
           +G G++G V E +D+  K +VAIK I+R  +   +   I  EI +L +L          +
Sbjct: 61  IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 108 QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDL-VREIARQLLECIAFMHDLCM 166
            I    +  + + +V E   S      R   Y +   +L ++ +   LL  + ++H   +
Sbjct: 121 VIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLT---ELHIKTLLYNLLVGVKYVHSAGI 177
Query: 167 IHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKD-SSYFKRMPKSSAIKVIDFGSTTYER 223
           +H DLKP N L+     +KV D+    ++  P++ +S     P+   + ++ F  T   +
Sbjct: 178 LHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLK 237
Query: 224 PDQNYIVSTRHYRAPEVI-LGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
                 V TR YRAPE+I L   +T   D+WS+GCI  EL     L    EN+ + A   
Sbjct: 238 RQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL-----LNMIKENVAYHA-DR 291
Query: 283 RVLGPLPQHMLKRVDRHAE---KYVRRGRLDWPE------GAASRESIKSVMK------- 326
             L P         D+ A    K+  RG  D         G  S E I+++ K       
Sbjct: 292 GPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYI 351
Query: 327 --LPRLQNL-IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
              P+ +   + +    S+ D  HLL+ +L ++P  R+T  E L HPFF
Sbjct: 352 RIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFF 400

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 154/340 (45%), Gaps = 90/340 (26%)
Query: 43  FADKIHSK--MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKY--REAAMIEIEVLQQL 96
           F+D+   +  +G+G+FG+V+ C D+   +  A+K++  R +K+   +E+ + E+++L+QL
Sbjct: 24  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 97  AKHDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFL--RKNNYRSFPIDLVREIARQ 153
              +       ++  +F+ + +  +V E   G  L+D +  RK   R   +D  R I RQ
Sbjct: 84  DHPN-----IXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK---RFSEVDAAR-IIRQ 134
Query: 154 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 213
           +L  I + H   ++H DLKPEN+LL S                          K + I++
Sbjct: 135 VLSGITYXHKNKIVHRDLKPENLLLESK------------------------SKDANIRI 170
Query: 214 IDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           IDFG +T+    +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F  
Sbjct: 171 IDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN- 228
Query: 272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 331
                         G     +LK+V++                       K   +LP+  
Sbjct: 229 --------------GANEYDILKKVEKG----------------------KYTFELPQ-- 250
Query: 332 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
               + V  SA D   L++  L Y P+ R++AR+AL H +
Sbjct: 251 ---WKKVSESAKD---LIRKXLTYVPSXRISARDALDHEW 284

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-----------LARTAGTS--- 179
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 330
           ++++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 283
Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 284 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 148/343 (43%), Gaps = 86/343 (25%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAKHDKGG 103
           K+GEGT+G V +  D + + +VA+K +R      GI      A+ EI +L++L   +   
Sbjct: 28  KVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIP---STAIREISLLKELHHPN--- 80
Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
              V + +       + +VFE +   L   L +N         ++    QLL  +A  H 
Sbjct: 81  --IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYE 222
             ++H DLKP+N+L+ S                             A+K+ DFG +  + 
Sbjct: 138 HRILHRDLKPQNLLINSD---------------------------GALKLADFGLARAFG 170
Query: 223 RPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
            P ++Y   V T  YRAP+V++G   ++   DIWS+GCI  E+ TG+ LF    + + L 
Sbjct: 171 IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLP 230
Query: 280 MMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG P P+                   +WP+          V +LP  +    Q  
Sbjct: 231 KIFSILGTPNPR-------------------EWPQ----------VQELPLWKQRTFQVF 261
Query: 339 DHSA---------GDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           +             +   LL  +L +DP  R++AR+A+ HP+F
Sbjct: 262 EKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 148/343 (43%), Gaps = 86/343 (25%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAKHDKGG 103
           K+GEGT+G V +  D + + +VA+K +R      GI      A+ EI +L++L   +   
Sbjct: 28  KVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIP---STAIREISLLKELHHPN--- 80
Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
              V + +       + +VFE +   L   L +N         ++    QLL  +A  H 
Sbjct: 81  --IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYE 222
             ++H DLKP+N+L+ S                             A+K+ DFG +  + 
Sbjct: 138 HRILHRDLKPQNLLINSD---------------------------GALKLADFGLARAFG 170
Query: 223 RPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
            P ++Y   V T  YRAP+V++G   ++   DIWS+GCI  E+ TG+ LF    + + L 
Sbjct: 171 IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLP 230
Query: 280 MMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  +LG P P+                   +WP+          V +LP  +    Q  
Sbjct: 231 KIFSILGTPNPR-------------------EWPQ----------VQELPLWKQRTFQVF 261
Query: 339 DHSA---------GDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           +             +   LL  +L +DP  R++AR+A+ HP+F
Sbjct: 262 EKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-----------LARTAGTS--- 179
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 330
           ++++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 283
Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 284 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 32/221 (14%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+               + ++++  
Sbjct: 132 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG--------------LARTAST- 176
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
             +F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ EL  G  +FQ  
Sbjct: 177 --NFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 226
Query: 273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
           ++++    +   LG      +  +      YV   R  +P G A  E     +     + 
Sbjct: 227 DHIDQWNKVIEQLGTPSAEFMAALQPTVRNYV-ENRPAYP-GIAFEELFPDWIFPSESER 284
Query: 333 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             ++           LL  +L  DP  R++  EALRHP+ T
Sbjct: 285 DKIK-----TSQARDLLSKMLVIDPDKRISVDEALRHPYIT 320

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-----------LARTAGTS--- 179
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 330
           ++++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 283
Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 284 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS--- 179
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 330
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 275
Query: 331 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 84.7 bits (208), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS--- 179
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 330
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 275
Query: 331 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 84.3 bits (207), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 127 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS--- 172
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 173 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 330
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 268
Query: 331 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 269 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 179
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 330
           ++++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 229 DHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 283
Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 284 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 180
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   
Sbjct: 181 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 330
           ++++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 230 DHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 284
Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 285 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 323

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS--- 179
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 330
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 275
Query: 331 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 48/229 (20%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  +                    
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------------RTA 176
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
             +F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ EL  G  +FQ  
Sbjct: 177 CTNFMMTPY--------VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGT 228
Query: 273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR-RGRLD-------WPEGAASRESIKSV 324
           ++++    +   LG      +  +      YV  R +         +P+     ES +  
Sbjct: 229 DHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDK 288
Query: 325 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
           +K  + ++               LL  +L  DP  R++  EALRHP+ T
Sbjct: 289 IKTSQARD---------------LLSKMLVIDPDKRISVDEALRHPYIT 322

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS--- 179
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 330
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 275
Query: 331 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 179
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 330
           ++++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 283
Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 284 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 179
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 330
           ++++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 283
Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 284 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-----------LARTAGTS--- 179
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVG I+ E+  G  LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGT 228
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 330
           ++++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 283
Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 284 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 143/328 (43%), Gaps = 83/328 (25%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           K+G G +G+VL C D+      AIKI+R   +     + ++E   + +L  H       +
Sbjct: 44  KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHP----NIM 99
Query: 108 QIRNWF-DYRNHICIVFEKLGSSLYD-FLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           ++ ++F D RN+  ++    G  L+D  + +  +      +   I +Q+L  + ++H   
Sbjct: 100 KLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVLSGVTYLHKHN 156
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERP 224
           ++H DLKPEN+LL S E                        K + IK++DFG S  +E  
Sbjct: 157 IVHRDLKPENLLLESKE------------------------KDALIKIVDFGLSAVFENQ 192
Query: 225 DQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
            +    + T +Y APEV L   +   CD+WS+G IL  L  G   F              
Sbjct: 193 KKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPPFG------------- 238
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
             G   Q +L++V++   KY      D PE                      ++V   A 
Sbjct: 239 --GQTDQEILRKVEKG--KYT----FDSPE---------------------WKNVSEGAK 269
Query: 344 DLTHLLQGLLRYDPTDRLTAREALRHPF 371
           D   L++ +L++D   R++A++AL HP+
Sbjct: 270 D---LIKQMLQFDSQRRISAQQALEHPW 294

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-----------LARTAGTS--- 179
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVG I+ E+  G  LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGT 228
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 330
           ++++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 283
Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 284 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  +       + F  +P      
Sbjct: 136 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMVP------ 186
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
                            V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   
Sbjct: 187 ----------------FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 230
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 330
           ++++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 231 DHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 285
Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 286 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 324

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  +                    
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----------------- 176
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
               G++    P+    V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   
Sbjct: 177 ----GTSFMMTPE----VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 330
           ++++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 229 DHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 283
Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 284 S----EHNALKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 217
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 218 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 330
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 313
Query: 331 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 314 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 217
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 218 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 330
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 313
Query: 331 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 314 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 180
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 181 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 330
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 276
Query: 331 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 277 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 179
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 330
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 275
Query: 331 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 180
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 181 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 330
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 276
Query: 331 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 277 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 133 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 178
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 179 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 227
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 330
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 228 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 274
Query: 331 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 275 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 179
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 330
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 275
Query: 331 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 172
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 173 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 330
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 268
Query: 331 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 269 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 173
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 174 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 330
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 269
Query: 331 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 270 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 173
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 174 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 330
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 269
Query: 331 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 270 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 141/349 (40%), Gaps = 92/349 (26%)
Query: 38  IVFSAFADKIH--SKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIE 91
           + F   +D+     K+G G +G+VL C D+      AIKI++           A + E+ 
Sbjct: 14  LYFQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVA 73
Query: 92  VLQQLAKHDKGGNRCVQIRNWF-DYRNHICIVFEKLGSSLYD--FLRKNNYRSFPIDLVR 148
           VL+QL   +      +++  +F D RN+  ++    G  L+D   LR+     F      
Sbjct: 74  VLKQLDHPN-----IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK----FSEVDAA 124
Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE---YIKVPDYKSSLHTPKDSSYFKRM 205
            I +Q+L    ++H   ++H DLKPEN+LL S      IK+ D+  S H           
Sbjct: 125 VIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH----------- 173
Query: 206 PKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                    + G    ER      + T +Y APEV L   +   CD+WS G IL  L  G
Sbjct: 174 --------FEVGGKMKER------LGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCG 218
Query: 266 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM 325
              F                G   Q +LKRV++       +   D P+     +  K ++
Sbjct: 219 YPPFG---------------GQTDQEILKRVEKG------KFSFDPPDWTQVSDEAKQLV 257
Query: 326 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           KL                        +L Y+P+ R++A EAL HP+  +
Sbjct: 258 KL------------------------MLTYEPSKRISAEEALNHPWIVK 282

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NVL +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVL-I 164
Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 237
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 238 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 295
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 296 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 355
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 356 DPTDRLTAREALRHPFF 372
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 145/339 (42%), Gaps = 51/339 (15%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +K+G+GTFG+V +   R+  + VA+K V      + +   A+ EI++LQ L KH+   N 
Sbjct: 23  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ-LLKHENVVNL 81
Query: 106 CVQIRN----WFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
               R     +   +  I +VF+     L   L  N    F +  ++ + + LL  + ++
Sbjct: 82  IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNGLYYI 140
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   ++H D+K  NVL+     +K+ D+                      +       + 
Sbjct: 141 HRNKILHRDMKAANVLITRDGVLKLADF-------------------GLARAFSLAKNSQ 181
Query: 222 ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                N +V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +     LA+
Sbjct: 182 PNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 240
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAAS--RESIKSVMKLPRLQNLIMQHV 338
           + ++ G +   +   VD     Y    +L+  +G     ++ +K+ ++ P   +LI    
Sbjct: 241 ISQLCGSITPEVWPNVD----NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLI---- 292
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
                        LL  DP  R+ + +AL H FF  D +
Sbjct: 293 -----------DKLLVLDPAQRIDSDDALNHDFFWSDPM 320

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 108 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 162
Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 237
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 163 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 197
Query: 238 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 295
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 198 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 255
Query: 296 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 355
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 256 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 305
Query: 356 DPTDRLTAREALRHPFF 372
           D   RLTAREA+ HP+F
Sbjct: 306 DHQSRLTAREAMEHPYF 322

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 237
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 238 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 295
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 296 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 355
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 356 DPTDRLTAREALRHPFF 372
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 237
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 238 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 295
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 296 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 355
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 356 DPTDRLTAREALRHPFF 372
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 237
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 238 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 295
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 296 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 355
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 356 DPTDRLTAREALRHPFF 372
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 237
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 238 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 295
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 296 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 355
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 356 DPTDRLTAREALRHPFF 372
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 145/339 (42%), Gaps = 51/339 (15%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +K+G+GTFG+V +   R+  + VA+K V      + +   A+ EI++LQ L KH+   N 
Sbjct: 24  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ-LLKHENVVNL 82
Query: 106 CVQIRN----WFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
               R     +   +  I +VF+     L   L  N    F +  ++ + + LL  + ++
Sbjct: 83  IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   ++H D+K  NVL+     +K+ D+                      +       + 
Sbjct: 142 HRNKILHRDMKAANVLITRDGVLKLADF-------------------GLARAFSLAKNSQ 182
Query: 222 ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                N +V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +     LA+
Sbjct: 183 PNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAAS--RESIKSVMKLPRLQNLIMQHV 338
           + ++ G +   +   VD     Y    +L+  +G     ++ +K+ ++ P   +LI    
Sbjct: 242 ISQLCGSITPEVWPNVD----NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLI---- 293
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
                        LL  DP  R+ + +AL H FF  D +
Sbjct: 294 -----------DKLLVLDPAQRIDSDDALNHDFFWSDPM 321

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 237
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 238 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 295
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 296 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 355
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 356 DPTDRLTAREALRHPFF 372
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 109 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 163
Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 237
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 164 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 198
Query: 238 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 295
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 199 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 256
Query: 296 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 355
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 257 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 306
Query: 356 DPTDRLTAREALRHPFF 372
           D   RLTAREA+ HP+F
Sbjct: 307 DHQSRLTAREAMEHPYF 323

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 145/339 (42%), Gaps = 51/339 (15%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +K+G+GTFG+V +   R+  + VA+K V      + +   A+ EI++LQ L KH+   N 
Sbjct: 24  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ-LLKHENVVNL 82
Query: 106 CVQIRN----WFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
               R     +   +  I +VF+     L   L  N    F +  ++ + + LL  + ++
Sbjct: 83  IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   ++H D+K  NVL+     +K+ D+                      +       + 
Sbjct: 142 HRNKILHRDMKAANVLITRDGVLKLADF-------------------GLARAFSLAKNSQ 182
Query: 222 ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                N +V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +     LA+
Sbjct: 183 PNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAAS--RESIKSVMKLPRLQNLIMQHV 338
           + ++ G +   +   VD     Y    +L+  +G     ++ +K+ ++ P   +LI    
Sbjct: 242 ISQLCGSITPEVWPNVD----NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLI---- 293
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
                        LL  DP  R+ + +AL H FF  D +
Sbjct: 294 -----------DKLLVLDPAQRIDSDDALNHDFFWSDPM 321

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 237
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 238 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 295
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 296 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 355
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 356 DPTDRLTAREALRHPFF 372
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 109 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 163
Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 237
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 164 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 198
Query: 238 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 295
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 199 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 256
Query: 296 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 355
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 257 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 306
Query: 356 DPTDRLTAREALRHPFF 372
           D   RLTAREA+ HP+F
Sbjct: 307 DHQSRLTAREAMEHPYF 323

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 237
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 238 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 295
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 296 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 355
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 356 DPTDRLTAREALRHPFF 372
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 144/339 (42%), Gaps = 51/339 (15%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +K+G+GTFG+V +   R+  + VA+K V      + +   A+ EI++LQ L KH+   N 
Sbjct: 24  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ-LLKHENVVNL 82
Query: 106 CVQIRNWFDYRNH----ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
               R      N     I +VF+     L   L  N    F +  ++ + + LL  + ++
Sbjct: 83  IEICRTKASPYNRCKASIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   ++H D+K  NVL+     +K+ D+                      +       + 
Sbjct: 142 HRNKILHRDMKAANVLITRDGVLKLADF-------------------GLARAFSLAKNSQ 182
Query: 222 ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                N +V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +     LA+
Sbjct: 183 PNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAAS--RESIKSVMKLPRLQNLIMQHV 338
           + ++ G +   +   VD     Y    +L+  +G     ++ +K+ ++ P   +LI    
Sbjct: 242 ISQLCGSITPEVWPNVD----NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLI---- 293
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
                        LL  DP  R+ + +AL H FF  D +
Sbjct: 294 -----------DKLLVLDPAQRIDSDDALNHDFFWSDPM 321

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 115 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 169
Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 237
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 170 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 204
Query: 238 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 295
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 205 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 262
Query: 296 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 355
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 263 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 312
Query: 356 DPTDRLTAREALRHPFF 372
           D   RLTAREA+ HP+F
Sbjct: 313 DHQSRLTAREAMEHPYF 329

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 138/334 (41%), Gaps = 88/334 (26%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+G G +G+VL C D+      AIKI++           A + E+ VL+QL   +     
Sbjct: 11  KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN----- 65
Query: 106 CVQIRNWF-DYRNHICIVFEKLGSSLYD--FLRKNNYRSFPIDLVREIARQLLECIAFMH 162
            +++  +F D RN+  ++    G  L+D   LR    + F       I +Q+L    ++H
Sbjct: 66  IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR----QKFSEVDAAVIMKQVLSGTTYLH 121
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTY 221
              ++H DLKPEN+LL S                          + + IK++DFG S  +
Sbjct: 122 KHNIVHRDLKPENLLLESK------------------------SRDALIKIVDFGLSAHF 157
Query: 222 ERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
           E   +    + T +Y APEV L   +   CD+WS G IL  L  G   F           
Sbjct: 158 EVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFG---------- 206
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
                G   Q +LKRV++       +   D P+     +  K ++KL             
Sbjct: 207 -----GQTDQEILKRVEKG------KFSFDPPDWTQVSDEAKQLVKL------------- 242
Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                      +L Y+P+ R++A EAL HP+  +
Sbjct: 243 -----------MLTYEPSKRISAEEALNHPWIVK 265

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 237
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 238 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 295
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 296 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 355
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 356 DPTDRLTAREALRHPFF 372
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/336 (22%), Positives = 137/336 (40%), Gaps = 84/336 (25%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGG 103
           I  ++G G FG V  C ++    +   K +     + KY      EI ++ QL  H K  
Sbjct: 55  ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQL-HHPK-- 109
Query: 104 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
              + + + F+ +  + ++ E L G  L+D +   +Y+    +++  + RQ  E +  MH
Sbjct: 110 --LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM-RQACEGLKHMH 166
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
           +  ++H D+KPEN++  +                          K+S++K+IDFG  T  
Sbjct: 167 EHSIVHLDIKPENIMCETK-------------------------KASSVKIIDFGLATKL 201
Query: 223 RPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
            PD+      +T  + APE++      +  D+W++G +   L +G + F   ++LE L  
Sbjct: 202 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQN 261
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
           ++R                          DW     +  S+      P  ++ I      
Sbjct: 262 VKRC-------------------------DWEFDEDAFSSVS-----PEAKDFI------ 285
Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                    + LL+ +P  RLT  +AL HP+   DH
Sbjct: 286 ---------KNLLQKEPRKRLTVHDALEHPWLKGDH 312

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 138/345 (40%), Gaps = 93/345 (26%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREA-----AMIEIEVLQQLAKHDK 101
           +G G  G+V   ++R+  + VAIKI+      I   REA        EIE+L++L     
Sbjct: 18  LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL----- 72
Query: 102 GGNRCV-QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
             + C+ +I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L  + +
Sbjct: 73  -NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQY 129
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H+  +IH DLKPENVLL S E                        +   IK+ DFG + 
Sbjct: 130 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 165
Query: 221 Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTHENL 275
              E      +  T  Y APEV++ +   G+    D WS+G IL    +G   F  H   
Sbjct: 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--- 222
Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW-PEGAASRESIKSVMKLPRLQNLI 334
                              R     +  +  G+ ++ PE                    +
Sbjct: 223 -------------------RTQVSLKDQITSGKYNFIPE--------------------V 243
Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
              V   A D   L++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 244 WAEVSEKALD---LVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 138/345 (40%), Gaps = 93/345 (26%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREA-----AMIEIEVLQQLAKHDK 101
           +G G  G+V   ++R+  + VAIKI+      I   REA        EIE+L++L     
Sbjct: 18  LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL----- 72
Query: 102 GGNRCV-QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
             + C+ +I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L  + +
Sbjct: 73  -NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQY 129
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H+  +IH DLKPENVLL S E                        +   IK+ DFG + 
Sbjct: 130 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 165
Query: 221 Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTHENL 275
              E      +  T  Y APEV++ +   G+    D WS+G IL    +G   F  H   
Sbjct: 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--- 222
Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW-PEGAASRESIKSVMKLPRLQNLI 334
                              R     +  +  G+ ++ PE                    +
Sbjct: 223 -------------------RTQVSLKDQITSGKYNFIPE--------------------V 243
Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
              V   A D   L++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 244 WAEVSEKALD---LVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 138/345 (40%), Gaps = 93/345 (26%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREA-----AMIEIEVLQQLAKHDK 101
           +G G  G+V   ++R+  + VAIKI+      I   REA        EIE+L++L     
Sbjct: 24  LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL----- 78
Query: 102 GGNRCV-QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
             + C+ +I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L  + +
Sbjct: 79  -NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQY 135
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H+  +IH DLKPENVLL S E                        +   IK+ DFG + 
Sbjct: 136 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 171
Query: 221 Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTHENL 275
              E      +  T  Y APEV++ +   G+    D WS+G IL    +G   F  H   
Sbjct: 172 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--- 228
Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW-PEGAASRESIKSVMKLPRLQNLI 334
                              R     +  +  G+ ++ PE                    +
Sbjct: 229 -------------------RTQVSLKDQITSGKYNFIPE--------------------V 249
Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
              V   A D   L++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 250 WAEVSEKALD---LVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 291

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 138/345 (40%), Gaps = 93/345 (26%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREA-----AMIEIEVLQQLAKHDK 101
           +G G  G+V   ++R+  + VAIKI+      I   REA        EIE+L++L     
Sbjct: 18  LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL----- 72
Query: 102 GGNRCV-QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
             + C+ +I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L  + +
Sbjct: 73  -NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQY 129
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H+  +IH DLKPENVLL S E                        +   IK+ DFG + 
Sbjct: 130 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 165
Query: 221 Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTHENL 275
              E      +  T  Y APEV++ +   G+    D WS+G IL    +G   F  H   
Sbjct: 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--- 222
Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW-PEGAASRESIKSVMKLPRLQNLI 334
                              R     +  +  G+ ++ PE                    +
Sbjct: 223 -------------------RTQVSLKDQITSGKYNFIPE--------------------V 243
Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
              V   A D   L++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 244 WAEVSEKALD---LVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 138/345 (40%), Gaps = 93/345 (26%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREA-----AMIEIEVLQQLAKHDK 101
           +G G  G+V   ++R+  + VAIKI+      I   REA        EIE+L++L     
Sbjct: 17  LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL----- 71
Query: 102 GGNRCV-QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
             + C+ +I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L  + +
Sbjct: 72  -NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQY 128
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H+  +IH DLKPENVLL S E                        +   IK+ DFG + 
Sbjct: 129 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 164
Query: 221 Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTHENL 275
              E      +  T  Y APEV++ +   G+    D WS+G IL    +G   F  H   
Sbjct: 165 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--- 221
Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW-PEGAASRESIKSVMKLPRLQNLI 334
                              R     +  +  G+ ++ PE                    +
Sbjct: 222 -------------------RTQVSLKDQITSGKYNFIPE--------------------V 242
Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
              V   A D   L++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 243 WAEVSEKALD---LVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 284

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 46/257 (17%)
Query: 120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
            +VFE + ++ +  LR+    +     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNTDFKQLRQ----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 237
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 238 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 295
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 296 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 355
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 356 DPTDRLTAREALRHPFF 372
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 173
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 174 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 222
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 330
           + ++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 277
Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 278 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 316

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 139 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 184
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
              F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 185 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 233
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 330
           + ++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 234 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 288
Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 289 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 327

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 36/223 (16%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  +                    
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----------------- 176
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
               G++    P+    V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 177 ----GTSFMMEPE----VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGR 228
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 330
           + ++    ++E++  P P  M K++      YV     + P+ A  S E +   +  P  
Sbjct: 229 DYIDQWNKVIEQLGTPCPAFM-KKLQPTVRNYVE----NRPKYAGYSFEKLFPDVLFPAD 283
Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 284 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  +                    
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----------------- 176
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
               G++    P+    V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 177 ----GTSFMMEPE----VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 228
Query: 273 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 330
           + ++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 283
Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 284 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 138/345 (40%), Gaps = 93/345 (26%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREA-----AMIEIEVLQQLAKHDK 101
           +G G  G+V   ++R+  + VAI+I+      I   REA        EIE+L++L     
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL----- 211
Query: 102 GGNRCV-QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
             + C+ +I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L  + +
Sbjct: 212 -NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQY 268
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H+  +IH DLKPENVLL S E                        +   IK+ DFG + 
Sbjct: 269 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 304
Query: 221 Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTHENL 275
              E      +  T  Y APEV++ +   G+    D WS+G IL    +G   F  H   
Sbjct: 305 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--- 361
Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW-PEGAASRESIKSVMKLPRLQNLI 334
                              R     +  +  G+ ++ PE                    +
Sbjct: 362 -------------------RTQVSLKDQITSGKYNFIPE--------------------V 382
Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
              V   A D   L++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 383 WAEVSEKALD---LVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 424

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 138/345 (40%), Gaps = 93/345 (26%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREA-----AMIEIEVLQQLAKHDK 101
           +G G  G+V   ++R+  + VAI+I+      I   REA        EIE+L++L     
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL----- 197
Query: 102 GGNRCV-QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
             + C+ +I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L  + +
Sbjct: 198 -NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQY 254
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H+  +IH DLKPENVLL S E                        +   IK+ DFG + 
Sbjct: 255 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 290
Query: 221 Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTHENL 275
              E      +  T  Y APEV++ +   G+    D WS+G IL    +G   F  H   
Sbjct: 291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--- 347
Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW-PEGAASRESIKSVMKLPRLQNLI 334
                              R     +  +  G+ ++ PE                    +
Sbjct: 348 -------------------RTQVSLKDQITSGKYNFIPE--------------------V 368
Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
              V   A D   L++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 369 WAEVSEKALD---LVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 410

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 107/252 (42%), Gaps = 48/252 (19%)
Query: 141 SFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS 200
             P  +V+ +  Q+L+ I ++H   ++H DLKP N+L++                     
Sbjct: 124 QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG------------------ 165
Query: 201 YFKRMPKSSAIKVIDFG-STTYERP-----DQNYIVSTRHYRAPEVILGL-GWTYPCDIW 253
                P+   +K+ D G +  +  P     D + +V T  YRAPE++LG   +T   DIW
Sbjct: 166 -----PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIW 220
Query: 254 SVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE 313
           ++GCI  EL T E +F   +        E +    P H   ++DR           DW E
Sbjct: 221 AIGCIFAELLTSEPIFHCRQ--------EDIKTSNPYHH-DQLDRIFNVMGFPADKDW-E 270
Query: 314 GAASRESIKSVMKLPR--------LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 365
                    ++MK  R        L   + +H         HLLQ LL  DP  R+T+ +
Sbjct: 271 DIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330
Query: 366 ALRHPFFTRDHL 377
           A++ P+F  D L
Sbjct: 331 AMQDPYFLEDPL 342

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 46/234 (19%)
Query: 147 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 206
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 148 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 185
Query: 207 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 263
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 186 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 241
Query: 264 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP--EGAASRES 320
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD P  E    R S
Sbjct: 242 FRKEPFFYGHDNHDQLVKIAKVLG------TDGLNAYLNKY--RIELD-PQLEALVGRHS 292
Query: 321 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 293 RKPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 341

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 46/234 (19%)
Query: 147 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 206
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 164
Query: 207 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 263
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 165 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
Query: 264 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP--EGAASRES 320
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD P  E    R S
Sbjct: 221 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELD-PQLEALVGRHS 271
Query: 321 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 272 RKPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 46/234 (19%)
Query: 147 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 206
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 164
Query: 207 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 263
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 165 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
Query: 264 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP--EGAASRES 320
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD P  E    R S
Sbjct: 221 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELD-PQLEALVGRHS 271
Query: 321 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 272 RKPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 46/234 (19%)
Query: 147 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 206
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 165
Query: 207 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 263
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 166 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 221
Query: 264 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP--EGAASRES 320
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD P  E    R S
Sbjct: 222 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELD-PQLEALVGRHS 272
Query: 321 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 273 RKPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 46/234 (19%)
Query: 147 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 206
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 165
Query: 207 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 263
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 166 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 221
Query: 264 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP--EGAASRES 320
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD P  E    R S
Sbjct: 222 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELD-PQLEALVGRHS 272
Query: 321 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 273 RKPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 46/234 (19%)
Query: 147 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 206
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 164
Query: 207 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 263
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 165 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
Query: 264 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP--EGAASRES 320
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD P  E    R S
Sbjct: 221 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELD-PQLEALVGRHS 271
Query: 321 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 272 RKPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 46/234 (19%)
Query: 147 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 206
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 164
Query: 207 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 263
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 165 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
Query: 264 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP--EGAASRES 320
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD P  E    R S
Sbjct: 221 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELD-PQLEALVGRHS 271
Query: 321 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 272 RKPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 46/234 (19%)
Query: 147 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 206
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 164
Query: 207 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 263
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 165 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
Query: 264 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP--EGAASRES 320
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD P  E    R S
Sbjct: 221 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELD-PQLEALVGRHS 271
Query: 321 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 272 RKPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 46/234 (19%)
Query: 147 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 206
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 164
Query: 207 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 263
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 165 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
Query: 264 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP--EGAASRES 320
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD P  E    R S
Sbjct: 221 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELD-PQLEALVGRHS 271
Query: 321 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 272 RKPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 46/234 (19%)
Query: 147 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 206
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 129 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 166
Query: 207 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 263
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 167 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 222
Query: 264 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP--EGAASRES 320
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD P  E    R S
Sbjct: 223 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELD-PQLEALVGRHS 273
Query: 321 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 274 RKPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 322

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 135/332 (40%), Gaps = 83/332 (25%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G  G+VLEC+ R   +  A+K++    K R+    E++   Q +    GG   V I 
Sbjct: 37  LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVDHHWQAS----GGPHIVCIL 88
Query: 111 NWFDYRNH----ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           + ++  +H    + I+ E + G  L+  +++   ++F      EI R +   I F+H   
Sbjct: 89  DVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN 148
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+L  S E                        K + +K+ DFG    +   
Sbjct: 149 IAHRDVKPENLLYTSKE------------------------KDAVLKLTDFGFA--KETT 182
Query: 226 QNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           QN + +   T +Y APEV+    +   CD+WS+G I+  L  G                 
Sbjct: 183 QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG----------------- 225
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
               P   +  + +    ++ +R G+  +P    S  S                      
Sbjct: 226 --FPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVS---------------------- 261
Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            D   L++ LL+ DPT+RLT  + + HP+  +
Sbjct: 262 EDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 293

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 74.7 bits (182), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 135/332 (40%), Gaps = 83/332 (25%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G  G+VLEC+ R   +  A+K++    K R+    E++   Q +    GG   V I 
Sbjct: 18  LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVDHHWQAS----GGPHIVCIL 69
Query: 111 NWFDYRNH----ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           + ++  +H    + I+ E + G  L+  +++   ++F      EI R +   I F+H   
Sbjct: 70  DVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN 129
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+L  S E                        K + +K+ DFG    +   
Sbjct: 130 IAHRDVKPENLLYTSKE------------------------KDAVLKLTDFGFA--KETT 163
Query: 226 QNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
           QN + +   T +Y APEV+    +   CD+WS+G I+  L  G                 
Sbjct: 164 QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG----------------- 206
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
               P   +  + +    ++ +R G+  +P    S  S                      
Sbjct: 207 --FPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVS---------------------- 242
Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            D   L++ LL+ DPT+RLT  + + HP+  +
Sbjct: 243 EDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 274

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 74.7 bits (182), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 60/264 (22%)
Query: 120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
            +VFE + ++  DF  K  Y+      +R    +LL+ + + H   ++H D+KP NV++ 
Sbjct: 116 ALVFEYINNT--DF--KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 171
Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 237
             +                            +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 172 HQQ--------------------------KKLRLIDWGLAEFYHPAQEYNVRVASRYFKG 205
Query: 238 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 295
           PE+++    + Y  D+WS+GC+L  +    E  F   +N + L  + +VLG         
Sbjct: 206 PELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT-------- 257
Query: 296 VDRHAEKYVRRGRLDWPE------GAASRESIKSVMKLPRLQNLIMQHVDH-SAGDLTHL 348
                  Y+++  +D         G  SR+         R +N I     H  + +   L
Sbjct: 258 --EELYGYLKKYHIDLDPHFNDILGQHSRK---------RWENFIHSENRHLVSPEALDL 306
Query: 349 LQGLLRYDPTDRLTAREALRHPFF 372
           L  LLRYD   RLTA+EA+ HP+F
Sbjct: 307 LDKLLRYDHQQRLTAKEAMEHPYF 330

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 60/264 (22%)
Query: 120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
            +VFE + ++  DF  K  Y+      +R    +LL+ + + H   ++H D+KP NV++ 
Sbjct: 111 ALVFEYINNT--DF--KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 166
Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 237
             +                            +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 167 HQQ--------------------------KKLRLIDWGLAEFYHPAQEYNVRVASRYFKG 200
Query: 238 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 295
           PE+++    + Y  D+WS+GC+L  +    E  F   +N + L  + +VLG         
Sbjct: 201 PELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT-------- 252
Query: 296 VDRHAEKYVRRGRLDWPE------GAASRESIKSVMKLPRLQNLIMQHVDH-SAGDLTHL 348
                  Y+++  +D         G  SR+         R +N I     H  + +   L
Sbjct: 253 --EELYGYLKKYHIDLDPHFNDILGQHSRK---------RWENFIHSENRHLVSPEALDL 301
Query: 349 LQGLLRYDPTDRLTAREALRHPFF 372
           L  LLRYD   RLTA+EA+ HP+F
Sbjct: 302 LDKLLRYDHQQRLTAKEAMEHPYF 325

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 135/331 (40%), Gaps = 81/331 (24%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK--HDKGGNRCVQ 108
           +G+G F  V  C +RE  +  A+KIV  + K+  +  +  E L++ A   H       V+
Sbjct: 32  IGKGAFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 109 IRNWFDYRNHICIVFEKL-GSSL-YDFLRKNNYR-SFPIDLVREIARQLLECIAFMHDLC 165
           +   +     + +VFE + G+ L ++ +++ +    +   +     RQ+LE + + HD  
Sbjct: 91  LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IH D+KPENVLL S E                         S+ +K+ DFG    +  +
Sbjct: 151 IIHRDVKPENVLLASKE------------------------NSAPVKLGDFG-VAIQLGE 185
Query: 226 QNYI----VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
              +    V T H+ APEV+    +  P D+W  G IL  L +G         L      
Sbjct: 186 SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG--------CLPFYGTK 237
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
           ER+                            EG      IK   K+   Q     H+  S
Sbjct: 238 ERLF---------------------------EGI-----IKGKYKMNPRQ---WSHISES 262
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           A D   L++ +L  DP +R+T  EAL HP+ 
Sbjct: 263 AKD---LVRRMLMLDPAERITVYEALNHPWL 290

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 132/340 (38%), Gaps = 92/340 (27%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVR---------GIKKYREAAMIEIEVLQQLAKHDK 101
           +G G    V  C  R      A+KI+           +++ REA   E  +L+Q+A H  
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP- 160
Query: 102 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                + + + ++  + + +VF+ +    L+D+L +    +      R I R LLE ++F
Sbjct: 161 ---HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSF 215
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   ++H DLKPEN+LL  +  I++ D+  S H                   ++ G   
Sbjct: 216 LHANNIVHRDLKPENILLDDNMQIRLSDFGFSCH-------------------LEPGEKL 256
Query: 221 YERPDQNYIVSTRHYRAPEVI-LGLGWTYP-----CDIWSVGCILVELCTGEALFQTHEN 274
            E      +  T  Y APE++   +  T+P      D+W+ G IL  L  G   F     
Sbjct: 257 RE------LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ 310
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           +  L M+                   E   +    +W                       
Sbjct: 311 ILMLRMI------------------MEGQYQFSSPEW----------------------- 329
Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
               D  +  +  L+  LL+ DP  RLTA +AL+HPFF R
Sbjct: 330 ----DDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 152/348 (43%), Gaps = 42/348 (12%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV-RGIKKYREAAMI--EIEVLQQLAKHDKGGNRCV 107
           +G G++G V   +D+  ++ VAIK V R  +   +   I  EI +L +L          +
Sbjct: 34  IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 108 QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE----IARQLLECIAFMHD 163
            I +     + + IV E   S L    +       PI L  E    I   LL    F+H+
Sbjct: 94  IIPDDLLKFDELYIVLEIADSDLKKLFKT------PIFLTEEHIKTILYNLLLGENFIHE 147
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
             +IH DLKP N LL     +KV D+    ++++ KD++    + ++         +   
Sbjct: 148 SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP---HNKNL 204
Query: 222 ERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
           ++   +++V TR YRAPE+IL    +T   DIWS GCI  EL     + Q+H N      
Sbjct: 205 KKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAELLN---MLQSHIND---PT 257
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE------GAASRESIKSVMKLPRLQNL- 333
               L P         DR+++K   +   D         G  + + +K++ K   ++ + 
Sbjct: 258 NRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIK 317
Query: 334 ---------IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                    + Q     + D  +LL+ +L+++P  R+T  +AL HP+ 
Sbjct: 318 LFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYL 365

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 128/331 (38%), Gaps = 80/331 (24%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLAKHDKGGNR 105
           IH ++G G FG V    +R      A K V    +  +E    EI+ +  L +H      
Sbjct: 55  IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPT---- 109
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V + + F+  N + +++E + G  L++ +  + +     D   E  RQ+ + +  MH+ 
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             +H DLKPEN++  +                          +S+ +K+IDFG T +  P
Sbjct: 169 NYVHLDLKPENIMFTTK-------------------------RSNELKLIDFGLTAHLDP 203
Query: 225 DQNYIVS--TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
            Q+  V+  T  + APEV  G    Y  D+WSVG +   L +G + F    + E L  ++
Sbjct: 204 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK 263
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
                                      DW                    N+        +
Sbjct: 264 SC-------------------------DW--------------------NMDDSAFSGIS 278
Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
            D    ++ LL  DP  R+T  +AL HP+ T
Sbjct: 279 EDGKDFIRKLLLADPNTRMTIHQALEHPWLT 309

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 128/331 (38%), Gaps = 80/331 (24%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLAKHDKGGNR 105
           IH ++G G FG V    +R      A K V    +  +E    EI+ +  L +H      
Sbjct: 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPT---- 215
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V + + F+  N + +++E + G  L++ +  + +     D   E  RQ+ + +  MH+ 
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             +H DLKPEN++  +                          +S+ +K+IDFG T +  P
Sbjct: 275 NYVHLDLKPENIMFTTK-------------------------RSNELKLIDFGLTAHLDP 309
Query: 225 DQNYIVS--TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
            Q+  V+  T  + APEV  G    Y  D+WSVG +   L +G + F    + E L  ++
Sbjct: 310 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK 369
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
                                      DW                    N+        +
Sbjct: 370 SC-------------------------DW--------------------NMDDSAFSGIS 384
Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
            D    ++ LL  DP  R+T  +AL HP+ T
Sbjct: 385 EDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 145/350 (41%), Gaps = 85/350 (24%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMIEIEVLQQLAKHDK-------- 101
           +G G  G V    D +  + VAIK IV    +  + A+ EI+++++L  HD         
Sbjct: 19  LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVFEIL 77
Query: 102 --GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR----QLL 155
              G++           N + IV E + + L + L +         L+ E AR    QLL
Sbjct: 78  GPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG-------PLLEEHARLFMYQLL 130
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   ++H DLKP N+ + + + +                          +K+ D
Sbjct: 131 RGLKYIHSANVLHRDLKPANLFINTEDLV--------------------------LKIGD 164
Query: 216 FGSTTYERPDQNYI------VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEAL 268
           FG      P  ++       + T+ YR+P ++L    +T   D+W+ GCI  E+ TG+ L
Sbjct: 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTL 224
Query: 269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHA-----EKYVRRGRLDWPEGAASRESIKS 323
           F     LE    M+ +L  +P  ++   DR         Y+R             E  K 
Sbjct: 225 FAGAHELEQ---MQLILESIP--VVHEEDRQELLSVIPVYIRNDM---------TEPHKP 270
Query: 324 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
           + +L  L  +  + VD         L+ +L + P DRLTA EAL HP+ +
Sbjct: 271 LTQL--LPGISREAVD--------FLEQILTFSPMDRLTAEEALSHPYMS 310

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/340 (21%), Positives = 134/340 (39%), Gaps = 84/340 (24%)
Query: 43  FADK--IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD 100
           F+D   +   +G G++ +   C  +      A+K+   I K +     EIE+L +  +H 
Sbjct: 25  FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEIEILLRYGQHP 81
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +++ +D   H+ +V E + G  L D + +  +  F       +   + + + 
Sbjct: 82  ----NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHTIGKTVE 135
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   ++H DLKP N+L                       Y         +++ DFG  
Sbjct: 136 YLHSQGVVHRDLKPSNIL-----------------------YVDESGNPECLRICDFGFA 172
Query: 220 TYERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
              R +   +++   T ++ APEV+   G+   CDIWS+G +L  +  G   F       
Sbjct: 173 KQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN----- 227
Query: 277 HLAMMERVLGP--LPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
                    GP   P+ +L R+   + K+   G  +W                       
Sbjct: 228 ---------GPSDTPEEILTRIG--SGKFTLSGG-NW----------------------- 252
Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
              V  +A D   L+  +L  DP  RLTA++ L+HP+ T+
Sbjct: 253 -NTVSETAKD---LVSKMLHVDPHQRLTAKQVLQHPWVTQ 288

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 134/327 (40%), Gaps = 76/327 (23%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI- 109
           +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A       R V + 
Sbjct: 76  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHIVRIVDVY 130
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++H + + H
Sbjct: 131 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 190
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+KPEN+L  S    K P+                    + +K+ DFG    E    N 
Sbjct: 191 RDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK-ETTSHNS 225
Query: 229 IVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L          
Sbjct: 226 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--------- 276
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                     +    +  +R G+ ++P    S  S +  M                    
Sbjct: 277 ----------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM-------------------- 306
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFF 372
             L++ LL+ +PT R+T  E + HP+ 
Sbjct: 307 --LIRNLLKTEPTQRMTITEFMNHPWI 331

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 134/327 (40%), Gaps = 76/327 (23%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI- 109
           +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A       R V + 
Sbjct: 40  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHIVRIVDVY 94
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++H + + H
Sbjct: 95  ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 154
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+KPEN+L  S    K P+                    + +K+ DFG    E    N 
Sbjct: 155 RDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK-ETTSHNS 189
Query: 229 IVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L          
Sbjct: 190 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--------- 240
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                     +    +  +R G+ ++P    S  S +  M                    
Sbjct: 241 ----------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM-------------------- 270
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFF 372
             L++ LL+ +PT R+T  E + HP+ 
Sbjct: 271 --LIRNLLKTEPTQRMTITEFMNHPWI 295

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 129/326 (39%), Gaps = 78/326 (23%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+GEG+ G V     R   ++VA+K +   K+ R   +    V+ +  +H+      V++
Sbjct: 27  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN----VVEM 82
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 83  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 139
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+K +++LL     +K+ D+       K                        E P +  
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSK------------------------EVPRRKX 175
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 288
           +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ + M+       
Sbjct: 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 228
Query: 289 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 348
                              R + P               PRL+NL        +  L   
Sbjct: 229 -------------------RDNLP---------------PRLKNL-----HKVSPSLKGF 249
Query: 349 LQGLLRYDPTDRLTAREALRHPFFTR 374
           L  LL  DP  R TA E L+HPF  +
Sbjct: 250 LDRLLVRDPAQRATAAELLKHPFLAK 275

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 134/327 (40%), Gaps = 76/327 (23%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI- 109
           +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A       R V + 
Sbjct: 31  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHIVRIVDVY 85
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++H + + H
Sbjct: 86  ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 145
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+KPEN+L  S    K P+                    + +K+ DFG    E    N 
Sbjct: 146 RDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK-ETTSHNS 180
Query: 229 IVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L          
Sbjct: 181 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--------- 231
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                     +    +  +R G+ ++P    S  S +  M                    
Sbjct: 232 ----------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM-------------------- 261
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFF 372
             L++ LL+ +PT R+T  E + HP+ 
Sbjct: 262 --LIRNLLKTEPTQRMTITEFMNHPWI 286

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 134/327 (40%), Gaps = 76/327 (23%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI- 109
           +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A       R V + 
Sbjct: 25  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHIVRIVDVY 79
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++H + + H
Sbjct: 80  ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 139
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+KPEN+L  S    K P+                    + +K+ DFG    E    N 
Sbjct: 140 RDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK-ETTSHNS 174
Query: 229 IVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L          
Sbjct: 175 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--------- 225
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                     +    +  +R G+ ++P    S  S +  M                    
Sbjct: 226 ----------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM-------------------- 255
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFF 372
             L++ LL+ +PT R+T  E + HP+ 
Sbjct: 256 --LIRNLLKTEPTQRMTITEFMNHPWI 280

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/346 (21%), Positives = 135/346 (39%), Gaps = 84/346 (24%)
Query: 37  YIVFSAFADK--IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQ 94
           Y     F+D   +   +G G++ +   C  +      A+K+   I K +     EIE+L 
Sbjct: 19  YFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEIEILL 75
Query: 95  QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 153
           +  +H       + +++ +D   H+ +V E + G  L D + +  +  F       +   
Sbjct: 76  RYGQHP----NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHT 129
Query: 154 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 213
           + + + ++H   ++H DLKP N+L                       Y         +++
Sbjct: 130 IGKTVEYLHSQGVVHRDLKPSNIL-----------------------YVDESGNPECLRI 166
Query: 214 IDFGSTTYERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 270
            DFG     R +   +++   T ++ APEV+   G+   CDIWS+G +L  +  G   F 
Sbjct: 167 CDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFA 226
Query: 271 THENLEHLAMMERVLGP--LPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 328
                          GP   P+ +L R+   + K+   G  +W                 
Sbjct: 227 N--------------GPSDTPEEILTRIG--SGKFTLSGG-NW----------------- 252
Query: 329 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                    V  +A D   L+  +L  DP  RLTA++ L+HP+ T+
Sbjct: 253 -------NTVSETAKD---LVSKMLHVDPHQRLTAKQVLQHPWVTQ 288

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 129/326 (39%), Gaps = 78/326 (23%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+GEG+ G V     R   ++VA+K +   K+ R   +    V+ +  +H+      V++
Sbjct: 31  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN----VVEM 86
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 87  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 143
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+K +++LL     +K+ D+       K                        E P +  
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSK------------------------EVPRRKX 179
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 288
           +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ + M+       
Sbjct: 180 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 232
Query: 289 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 348
                              R + P               PRL+NL        +  L   
Sbjct: 233 -------------------RDNLP---------------PRLKNL-----HKVSPSLKGF 253
Query: 349 LQGLLRYDPTDRLTAREALRHPFFTR 374
           L  LL  DP  R TA E L+HPF  +
Sbjct: 254 LDRLLVRDPAQRATAAELLKHPFLAK 279

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 115/273 (42%), Gaps = 46/273 (16%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLA 97
           I  ++G G F  V +C ++      A K +         RG+   RE    E+ +L+Q+ 
Sbjct: 16  IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS--REEIEREVSILRQVL 73
Query: 98  KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
            H+      + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+
Sbjct: 74  HHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + ++H   + H DLKPEN++L+    I +P                       IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 217 GSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
           G   +E  D      I  T  + APE++         D+WS+G I   L +G + F    
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
             E LA +  V     +    +    A+ ++R+
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 134/327 (40%), Gaps = 76/327 (23%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI- 109
           +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A       R V + 
Sbjct: 26  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHIVRIVDVY 80
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++H + + H
Sbjct: 81  ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+KPEN+L  S    K P+                    + +K+ DFG    E    N 
Sbjct: 141 RDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK-ETTSHNS 175
Query: 229 IVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L          
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--------- 226
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                     +    +  +R G+ ++P    S  S +  M                    
Sbjct: 227 ----------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM-------------------- 256
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFF 372
             L++ LL+ +PT R+T  E + HP+ 
Sbjct: 257 --LIRNLLKTEPTQRMTITEFMNHPWI 281

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 134/327 (40%), Gaps = 76/327 (23%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI- 109
           +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A       R V + 
Sbjct: 24  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHIVRIVDVY 78
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++H + + H
Sbjct: 79  ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+KPEN+L  S    K P+                    + +K+ DFG    E    N 
Sbjct: 139 RDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK-ETTSHNS 173
Query: 229 IVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L          
Sbjct: 174 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--------- 224
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                     +    +  +R G+ ++P    S  S +  M                    
Sbjct: 225 ----------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM-------------------- 254
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFF 372
             L++ LL+ +PT R+T  E + HP+ 
Sbjct: 255 --LIRNLLKTEPTQRMTITEFMNHPWI 279

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 134/327 (40%), Gaps = 76/327 (23%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI- 109
           +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A       R V + 
Sbjct: 32  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHIVRIVDVY 86
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++H + + H
Sbjct: 87  ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 146
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+KPEN+L  S    K P+                    + +K+ DFG    E    N 
Sbjct: 147 RDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK-ETTSHNS 181
Query: 229 IVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L          
Sbjct: 182 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--------- 232
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                     +    +  +R G+ ++P    S  S +  M                    
Sbjct: 233 ----------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM-------------------- 262
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFF 372
             L++ LL+ +PT R+T  E + HP+ 
Sbjct: 263 --LIRNLLKTEPTQRMTITEFMNHPWI 287

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 134/327 (40%), Gaps = 76/327 (23%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI- 109
           +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A       R V + 
Sbjct: 30  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHIVRIVDVY 84
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++H + + H
Sbjct: 85  ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 144
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+KPEN+L  S    K P+                    + +K+ DFG    E    N 
Sbjct: 145 RDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK-ETTSHNS 179
Query: 229 IVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L          
Sbjct: 180 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--------- 230
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                     +    +  +R G+ ++P    S  S +  M                    
Sbjct: 231 ----------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM-------------------- 260
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFF 372
             L++ LL+ +PT R+T  E + HP+ 
Sbjct: 261 --LIRNLLKTEPTQRMTITEFMNHPWI 285

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 129/326 (39%), Gaps = 78/326 (23%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+GEG+ G V     R   ++VA+K +   K+ R   +    V+ +  +H+      V++
Sbjct: 38  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN----VVEM 93
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 94  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 150
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+K +++LL     +K+ D+       K                        E P +  
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSK------------------------EVPRRKX 186
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 288
           +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ + M+       
Sbjct: 187 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 239
Query: 289 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 348
                              R + P               PRL+NL        +  L   
Sbjct: 240 -------------------RDNLP---------------PRLKNL-----HKVSPSLKGF 260
Query: 349 LQGLLRYDPTDRLTAREALRHPFFTR 374
           L  LL  DP  R TA E L+HPF  +
Sbjct: 261 LDRLLVRDPAQRATAAELLKHPFLAK 286

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 115/273 (42%), Gaps = 46/273 (16%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLA 97
           I  ++G G F  V +C ++      A K +         RG+   RE    E+ +L+Q+ 
Sbjct: 16  IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS--REEIEREVSILRQVL 73
Query: 98  KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
            H+      + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+
Sbjct: 74  HHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILD 126
Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + ++H   + H DLKPEN++L+    I +P                       IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 217 GSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
           G   +E  D      I  T  + APE++         D+WS+G I   L +G + F    
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
             E LA +  V     +    +    A+ ++R+
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 134/327 (40%), Gaps = 76/327 (23%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI- 109
           +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A       R V + 
Sbjct: 70  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHIVRIVDVY 124
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++H + + H
Sbjct: 125 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 184
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+KPEN+L  S    K P+                    + +K+ DFG    E    N 
Sbjct: 185 RDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK-ETTSHNS 219
Query: 229 IVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L          
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--------- 270
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                     +    +  +R G+ ++P    S  S +  M                    
Sbjct: 271 ----------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM-------------------- 300
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFF 372
             L++ LL+ +PT R+T  E + HP+ 
Sbjct: 301 --LIRNLLKTEPTQRMTITEFMNHPWI 325

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 127/324 (39%), Gaps = 78/324 (24%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+GEG+ G V    ++   + VA+K +   K+ R   +    V+ +   HD      V +
Sbjct: 52  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN----VVDM 107
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            + +   + + +V E L G +L D +          + +  +   +L  ++++H+  +IH
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIATVCLSVLRALSYLHNQGVIH 164
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+K +++LL S   IK+ D+       K                        E P +  
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSK------------------------EVPKRKX 200
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 288
           +V T ++ APEVI  L +    DIWS+G +++E+  GE     + N   L  M R+   L
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP---PYFNEPPLQAMRRIRDSL 257
Query: 289 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 348
           P  +    D H    V RG LD                                      
Sbjct: 258 PPRV---KDLHKVSSVLRGFLDL------------------------------------- 277
Query: 349 LQGLLRYDPTDRLTAREALRHPFF 372
              +L  +P+ R TA+E L HPF 
Sbjct: 278 ---MLVREPSQRATAQELLGHPFL 298

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 129/326 (39%), Gaps = 78/326 (23%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+GEG+ G V     R   ++VA+K +   K+ R   +    V+ +  +H+      V++
Sbjct: 81  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN----VVEM 136
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 193
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+K +++LL     +K+ D+       K                        E P +  
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSK------------------------EVPRRKX 229
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 288
           +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ + M+       
Sbjct: 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 282
Query: 289 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 348
                              R + P               PRL+NL        +  L   
Sbjct: 283 -------------------RDNLP---------------PRLKNL-----HKVSPSLKGF 303
Query: 349 LQGLLRYDPTDRLTAREALRHPFFTR 374
           L  LL  DP  R TA E L+HPF  +
Sbjct: 304 LDRLLVRDPAQRATAAELLKHPFLAK 329

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 129/326 (39%), Gaps = 78/326 (23%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+GEG+ G V     R   ++VA+K +   K+ R   +    V+ +  +H+      V++
Sbjct: 36  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN----VVEM 91
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 92  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 148
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+K +++LL     +K+ D+       K                        E P +  
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSK------------------------EVPRRKX 184
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 288
           +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ + M+       
Sbjct: 185 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 237
Query: 289 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 348
                              R + P               PRL+NL        +  L   
Sbjct: 238 -------------------RDNLP---------------PRLKNL-----HKVSPSLKGF 258
Query: 349 LQGLLRYDPTDRLTAREALRHPFFTR 374
           L  LL  DP  R TA E L+HPF  +
Sbjct: 259 LDRLLVRDPAQRATAAELLKHPFLAK 284

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 134/327 (40%), Gaps = 76/327 (23%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI- 109
           +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A       R V + 
Sbjct: 26  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHIVRIVDVY 80
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++H + + H
Sbjct: 81  ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+KPEN+L  S    K P+                    + +K+ DFG    E    N 
Sbjct: 141 RDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK-ETTSHNS 175
Query: 229 IVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L          
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--------- 226
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                     +    +  +R G+ ++P    S  S +  M                    
Sbjct: 227 ----------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM-------------------- 256
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFF 372
             L++ LL+ +PT R+T  E + HP+ 
Sbjct: 257 --LIRNLLKTEPTQRMTITEFMNHPWI 281

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 114/273 (41%), Gaps = 46/273 (16%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLA 97
           I  ++G G F  V +C ++      A K +         RG+   RE    E+ +L+Q+ 
Sbjct: 16  IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS--REEIEREVSILRQVL 73
Query: 98  KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
            H+      + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+
Sbjct: 74  HHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + ++H   + H DLKPEN++L+    I +P                       IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 217 GSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
           G   +E  D      I  T  + APE++         D+WS+G I   L +G + F    
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
             E LA +  V     +         A+ ++R+
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 114/273 (41%), Gaps = 46/273 (16%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLA 97
           I  ++G G F  V +C ++      A K +         RG+   RE    E+ +L+Q+ 
Sbjct: 16  IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS--REEIEREVSILRQVL 73
Query: 98  KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
            H+      + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+
Sbjct: 74  HHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILD 126
Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + ++H   + H DLKPEN++L+    I +P                       IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 217 GSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
           G   +E  D      I  T  + APE++         D+WS+G I   L +G + F    
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
             E LA +  V     +         A+ ++R+
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 32/221 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+GEG++G V +   +E  ++VAIK V  ++   +  + EI ++QQ           V+ 
Sbjct: 36  KLGEGSYGSVYKAIHKETGQIVAIKQVP-VESDLQEIIKEISIMQQC-----DSPHVVKY 89
Query: 110 RNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
              +     + IV E  G+ S+ D +R  N ++   D +  I +  L+ + ++H +  IH
Sbjct: 90  YGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFMRKIH 148
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+K  N+LL +  + K+ D+  +                        G  T     +N 
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVA------------------------GQLTDXMAKRNX 184
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
           ++ T  + APEVI  +G+    DIWS+G   +E+  G+  +
Sbjct: 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPY 225

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 114/273 (41%), Gaps = 46/273 (16%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLA 97
           I  ++G G F  V +C ++      A K +         RG+   RE    E+ +L+Q+ 
Sbjct: 16  IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS--REEIEREVSILRQVL 73
Query: 98  KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
            H+      + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+
Sbjct: 74  HHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILD 126
Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + ++H   + H DLKPEN++L+    I +P                       IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 217 GSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
           G   +E  D      I  T  + APE++         D+WS+G I   L +G + F    
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
             E LA +  V     +         A+ ++R+
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 133/327 (40%), Gaps = 76/327 (23%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI- 109
           +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A       R V + 
Sbjct: 24  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHIVRIVDVY 78
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++H + + H
Sbjct: 79  ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+KPEN+L  S    K P+                    + +K+ DFG    E    N 
Sbjct: 139 RDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK-ETTSHNS 173
Query: 229 IVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           +     T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L          
Sbjct: 174 LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--------- 224
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                     +    +  +R G+ ++P    S  S +  M                    
Sbjct: 225 ----------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM-------------------- 254
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFF 372
             L++ LL+ +PT R+T  E + HP+ 
Sbjct: 255 --LIRNLLKTEPTQRMTITEFMNHPWI 279

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 128/341 (37%), Gaps = 93/341 (27%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV----------RGIKKYREAAMIEIEVLQQLAKHD 100
           +G G    V  C  +   +  A+KI+            +++ REA + E+++L++++ H 
Sbjct: 25  LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 +Q+++ ++      +VF+ +    L+D+L +    +      R+I R LLE I 
Sbjct: 85  N----IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVIC 138
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +H L ++H DLKPEN+LL     IK+ D+  S                     +D G  
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ-------------------LDPGEK 179
Query: 220 TYERPDQNYIVSTRHYRAPEVILGL------GWTYPCDIWSVGCILVELCTGEALFQTHE 273
             E      +  T  Y APE+I         G+    D+WS G I+  L  G   F   +
Sbjct: 180 LRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233
Query: 274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 333
            +  L M+                       + G  +W                      
Sbjct: 234 QMLMLRMI------------------MSGNYQFGSPEW---------------------- 253
Query: 334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                D  +  +  L+   L   P  R TA EAL HPFF +
Sbjct: 254 -----DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 128/341 (37%), Gaps = 93/341 (27%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV----------RGIKKYREAAMIEIEVLQQLAKHD 100
           +G G    V  C  +   +  A+KI+            +++ REA + E+++L++++ H 
Sbjct: 12  LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 71
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 +Q+++ ++      +VF+ +    L+D+L +    +      R+I R LLE I 
Sbjct: 72  ----NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVIC 125
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +H L ++H DLKPEN+LL     IK+ D+  S                     +D G  
Sbjct: 126 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ-------------------LDPGEK 166
Query: 220 TYERPDQNYIVSTRHYRAPEVILGL------GWTYPCDIWSVGCILVELCTGEALFQTHE 273
             E      +  T  Y APE+I         G+    D+WS G I+  L  G   F   +
Sbjct: 167 LRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 220
Query: 274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 333
            +  L M+                       + G  +W                      
Sbjct: 221 QMLMLRMI------------------MSGNYQFGSPEW---------------------- 240
Query: 334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                D  +  +  L+   L   P  R TA EAL HPFF +
Sbjct: 241 -----DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 137/333 (41%), Gaps = 87/333 (26%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAM-IEIEVLQQLAKHDKGGNRCVQ 108
           +G G F +V+   D+  +++VAIK I +   + +E +M  EI VL ++ KH       V 
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI-KH----PNIVA 80
Query: 109 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIAR---QLLECIAFMHDL 164
           + + ++   H+ ++ + + G  L+D + +  + +      R+ +R   Q+L+ + ++HDL
Sbjct: 81  LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLIFQVLDAVKYLHDL 135
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            ++H DLKPEN+L  S                        + + S I + DFG +  E P
Sbjct: 136 GIVHRDLKPENLLYYS------------------------LDEDSKIMISDFGLSKMEDP 171
Query: 225 DQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
               +    T  Y APEV+    ++   D WS+G I   L  G   F    + +   + E
Sbjct: 172 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK---LFE 228
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
           ++L              AE        D P                         +  SA
Sbjct: 229 QIL-------------KAEY-----EFDSP---------------------YWDDISDSA 249
Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
            D    ++ L+  DP  R T  +AL+HP+   D
Sbjct: 250 KD---FIRHLMEKDPEKRFTCEQALQHPWIAGD 279

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 43/226 (19%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-----EAAMIEIEVLQQLAKHDKGGN 104
           K+G G FG V    +R        ++++ I K R     E    EIEVL+ L   +    
Sbjct: 29  KLGSGAFGDVHLVEERSSG---LERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN---- 81
Query: 105 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPID--LVREIARQLLECIAFM 161
             ++I   F+  +++ IV E   G  L + +     R   +    V E+ +Q++  +A+ 
Sbjct: 82  -IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   ++H DLKPEN+L             +S H+P              IK+IDFG    
Sbjct: 141 HSQHVVHKDLKPENILF----------QDTSPHSP--------------IKIIDFGLAEL 176
Query: 222 ERPDQNYI--VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
            + D++      T  Y APEV      T+ CDIWS G ++  L TG
Sbjct: 177 FKSDEHSTNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTG 221

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 136/333 (40%), Gaps = 87/333 (26%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAM-IEIEVLQQLAKHDKGGNRCVQ 108
           +G G F +V+   D+  +++VAIK I +   + +E +M  EI VL ++ KH       V 
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI-KH----PNIVA 80
Query: 109 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIAR---QLLECIAFMHDL 164
           + + ++   H+ ++ + + G  L+D + +  + +      R+ +R   Q+L+ + ++HDL
Sbjct: 81  LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLIFQVLDAVKYLHDL 135
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            ++H DLKPEN+L  S                        + + S I + DFG +  E P
Sbjct: 136 GIVHRDLKPENLLYYS------------------------LDEDSKIMISDFGLSKMEDP 171
Query: 225 DQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
               +    T  Y APEV+    ++   D WS+G I   L  G   F    + +      
Sbjct: 172 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK------ 225
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
                L + +LK        Y       W +                        +  SA
Sbjct: 226 -----LFEQILKAEYEFDSPY-------WDD------------------------ISDSA 249
Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
            D    ++ L+  DP  R T  +AL+HP+   D
Sbjct: 250 KD---FIRHLMEKDPEKRFTCEQALQHPWIAGD 279

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 136/333 (40%), Gaps = 87/333 (26%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAM-IEIEVLQQLAKHDKGGNRCVQ 108
           +G G F +V+   D+  +++VAIK I +   + +E +M  EI VL ++ KH       V 
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI-KH----PNIVA 80
Query: 109 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIAR---QLLECIAFMHDL 164
           + + ++   H+ ++ + + G  L+D + +  + +      R+ +R   Q+L+ + ++HDL
Sbjct: 81  LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLIFQVLDAVKYLHDL 135
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            ++H DLKPEN+L  S                        + + S I + DFG +  E P
Sbjct: 136 GIVHRDLKPENLLYYS------------------------LDEDSKIMISDFGLSKMEDP 171
Query: 225 DQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
               +    T  Y APEV+    ++   D WS+G I   L  G   F    + +      
Sbjct: 172 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK------ 225
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
                L + +LK        Y       W +                        +  SA
Sbjct: 226 -----LFEQILKAEYEFDSPY-------WDD------------------------ISDSA 249
Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
            D    ++ L+  DP  R T  +AL+HP+   D
Sbjct: 250 KD---FIRHLMEKDPEKRFTCEQALQHPWIAGD 279

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 135/333 (40%), Gaps = 87/333 (26%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAM-IEIEVLQQLAKHDKGGNRCVQ 108
           +G G F +V+   D+  +++VAIK I +   + +E +M  EI VL ++ KH       V 
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI-KH----PNIVA 80
Query: 109 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIAR---QLLECIAFMHDL 164
           + + ++   H+ ++ + + G  L+D + +  + +      R+ +R   Q+L+ + ++HDL
Sbjct: 81  LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLIFQVLDAVKYLHDL 135
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            ++H DLKPEN+L  S                        + + S I + DFG +  E P
Sbjct: 136 GIVHRDLKPENLLYYS------------------------LDEDSKIMISDFGLSKMEDP 171
Query: 225 DQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
               +    T  Y APEV+    ++   D WS+G I   L  G   F    +        
Sbjct: 172 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND-------- 223
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
                L + +LK        Y       W +                        +  SA
Sbjct: 224 ---AKLFEQILKAEYEFDSPY-------WDD------------------------ISDSA 249
Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
            D    ++ L+  DP  R T  +AL+HP+   D
Sbjct: 250 KD---FIRHLMEKDPEKRFTCEQALQHPWIAGD 279

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/343 (22%), Positives = 127/343 (37%), Gaps = 97/343 (28%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV----------RGIKKYREAAMIEIEVLQQLAKHD 100
           +G G    V  C  +   +  A+KI+            +++ REA + E+++L++++ H 
Sbjct: 25  LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 +Q+++ ++      +VF+ +    L+D+L +    +      R+I R LLE I 
Sbjct: 85  N----IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVIC 138
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +H L ++H DLKPEN+LL                                IK+ DFG +
Sbjct: 139 ALHKLNIVHRDLKPENILL---------------------------DDDMNIKLTDFGFS 171
Query: 220 TYERPDQNY--IVSTRHYRAPEVILGL------GWTYPCDIWSVGCILVELCTGEALFQT 271
               P +    +  T  Y APE+I         G+    D+WS G I+  L  G   F  
Sbjct: 172 CQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
Query: 272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 331
            + +  L M+                       + G  +W                    
Sbjct: 232 RKQMLMLRMI------------------MSGNYQFGSPEW-------------------- 253
Query: 332 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                  D  +  +  L+   L   P  R TA EAL HPFF +
Sbjct: 254 -------DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 129/326 (39%), Gaps = 78/326 (23%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+GEG+ G V     R   ++VA+K +   K+ R   +    V+ +  +H+      V++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN----VVEM 213
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 270
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+K +++LL     +K+ D+       K                        E P +  
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSK------------------------EVPRRKX 306
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 288
           +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ + M+       
Sbjct: 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 359
Query: 289 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 348
                              R + P               PRL+NL        +  L   
Sbjct: 360 -------------------RDNLP---------------PRLKNL-----HKVSPSLKGF 380
Query: 349 LQGLLRYDPTDRLTAREALRHPFFTR 374
           L  LL  DP  R TA E L+HPF  +
Sbjct: 381 LDRLLVRDPAQRATAAELLKHPFLAK 406

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 35/220 (15%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           ++G+G+FG+V +  D   +++VAIKI+     +   E    EI VL Q        +   
Sbjct: 30  RIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSSYVT 84
Query: 108 QIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +    +   + + I+ E LG  S  D LR   +  F I     + +++L+ + ++H    
Sbjct: 85  KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQI---ATMLKEILKGLDYLHSEKK 141
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           IH D+K  NVLL     +K+ D+  +                        G  T  +  +
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLTDTQIKR 177
Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
           N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 178 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 57/310 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLAKHD 100
           ++G G F  V +C ++      A K +         RG+   RE    E+ +L+++   +
Sbjct: 18  ELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIEREVSILKEIQHPN 75
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +   ++ +  + ++ E + G  L+DFL +    S   +   E  +Q+L  + 
Sbjct: 76  -----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVY 128
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-- 217
           ++H L + H DLKPEN++L+                       + +PK   IK+IDFG  
Sbjct: 129 YLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLA 165
Query: 218 -STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
               +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F   
Sbjct: 166 HKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGD 220
Query: 273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
              E LA +  V               A+ ++RR  +  P+    R +I+  ++ P ++ 
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK---KRMTIQDSLQHPWIKP 277
Query: 333 LIMQHVDHSA 342
              Q    SA
Sbjct: 278 KDTQQALSSA 287

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 46/270 (17%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLAKHD 100
           ++G G F  V +C ++      A K +         RG+   RE    E+ +L+++   +
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIEREVSILKEIQHPN 75
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +   ++ +  + ++ E + G  L+DFL +    S   +   E  +Q+L  + 
Sbjct: 76  -----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVY 128
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-- 217
           ++H L + H DLKPEN++L+                       + +PK   IK+IDFG  
Sbjct: 129 YLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLA 165
Query: 218 -STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
               +    +N I  T  + APE++         D+WS+G I   L +G + F      E
Sbjct: 166 HKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
            LA +  V               A+ ++RR
Sbjct: 225 TLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/335 (22%), Positives = 136/335 (40%), Gaps = 87/335 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++ S++G G    V  C  +  ++  A+K+++     ++    EI VL +L+  +     
Sbjct: 56  EVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-KKIVRTEIGVLLRLSHPN----- 109
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIA---RQLLECIAFM 161
            ++++  F+    I +V E + G  L+D + +  Y S      R+ A   +Q+LE +A++
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYS-----ERDAADAVKQILEAVAYL 164
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H+  ++H DLKPEN+L  +      PD                    + +K+ DFG +  
Sbjct: 165 HENGIVHRDLKPENLLYATP----APD--------------------APLKIADFGLSKI 200
Query: 222 ERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELCTGEALFQTHENLEHL 278
                    +  T  Y APE++ G  +    D+WSVG I  + LC  E  +    +    
Sbjct: 201 VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD---- 256
Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
                      Q M +R+  + E Y                              I    
Sbjct: 257 -----------QFMFRRI-LNCEYY-----------------------------FISPWW 275
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
           D  + +   L++ L+  DP  RLT  +AL+HP+ T
Sbjct: 276 DEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVT 310

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 46/270 (17%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLAKHD 100
           ++G G F  V +C ++      A K +         RG+   RE    E+ +L+++   +
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIEREVSILKEIQHPN 75
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +   ++ +  + ++ E + G  L+DFL +    S   +   E  +Q+L  + 
Sbjct: 76  -----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVY 128
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-- 217
           ++H L + H DLKPEN++L+                       + +PK   IK+IDFG  
Sbjct: 129 YLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLA 165
Query: 218 -STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
               +    +N I  T  + APE++         D+WS+G I   L +G + F      E
Sbjct: 166 HKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
            LA +  V               A+ ++RR
Sbjct: 225 TLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 46/270 (17%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLAKHD 100
           ++G G F  V +C ++      A K +         RG+   RE    E+ +L+++   +
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIEREVSILKEIQHPN 75
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +   ++ +  + ++ E + G  L+DFL +    S   +   E  +Q+L  + 
Sbjct: 76  -----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVY 128
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-- 217
           ++H L + H DLKPEN++L+                       + +PK   IK+IDFG  
Sbjct: 129 YLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLA 165
Query: 218 -STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
               +    +N I  T  + APE++         D+WS+G I   L +G + F      E
Sbjct: 166 HKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
            LA +  V               A+ ++RR
Sbjct: 225 TLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 57/310 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLAKHD 100
           ++G G F  V +C ++      A K +         RG+   RE    E+ +L+++   +
Sbjct: 18  ELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIEREVSILKEIQHPN 75
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +   ++ +  + ++ E + G  L+DFL +    S   +   E  +Q+L  + 
Sbjct: 76  -----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVY 128
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-- 217
           ++H L + H DLKPEN++L+                       + +PK   IK+IDFG  
Sbjct: 129 YLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLA 165
Query: 218 -STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
               +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F   
Sbjct: 166 HKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGD 220
Query: 273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
              E LA +  V               A+ ++RR  +  P+    R +I+  ++ P ++ 
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK---KRMTIQDSLQHPWIKP 277
Query: 333 LIMQHVDHSA 342
              Q    SA
Sbjct: 278 KDTQQALSSA 287

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 57/310 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLAKHD 100
           ++G G F  V +C ++      A K +         RG+   RE    E+ +L+++   +
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIEREVSILKEIQHPN 75
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +   ++ +  + ++ E + G  L+DFL +    S   +   E  +Q+L  + 
Sbjct: 76  -----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVY 128
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-- 217
           ++H L + H DLKPEN++L+                       + +PK   IK+IDFG  
Sbjct: 129 YLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLA 165
Query: 218 -STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
               +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F   
Sbjct: 166 HKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGD 220
Query: 273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
              E LA +  V               A+ ++RR  +  P+    R +I+  ++ P ++ 
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK---KRMTIQDSLQHPWIKP 277
Query: 333 LIMQHVDHSA 342
              Q    SA
Sbjct: 278 KDTQQALSSA 287

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 57/310 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLAKHD 100
           ++G G F  V +C ++      A K +         RG+   RE    E+ +L+++   +
Sbjct: 17  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIEREVSILKEIQHPN 74
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +   ++ +  + ++ E + G  L+DFL +    S   +   E  +Q+L  + 
Sbjct: 75  -----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVY 127
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-- 217
           ++H L + H DLKPEN++L+                       + +PK   IK+IDFG  
Sbjct: 128 YLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLA 164
Query: 218 -STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
               +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F   
Sbjct: 165 HKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGD 219
Query: 273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
              E LA +  V               A+ ++RR  +  P+    R +I+  ++ P ++ 
Sbjct: 220 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK---KRMTIQDSLQHPWIKP 276
Query: 333 LIMQHVDHSA 342
              Q    SA
Sbjct: 277 KDTQQALSSA 286

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 57/310 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLAKHD 100
           ++G G F  V +C ++      A K +         RG+   RE    E+ +L+++   +
Sbjct: 17  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIEREVSILKEIQHPN 74
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +   ++ +  + ++ E + G  L+DFL +    S   +   E  +Q+L  + 
Sbjct: 75  -----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVY 127
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-- 217
           ++H L + H DLKPEN++L+                       + +PK   IK+IDFG  
Sbjct: 128 YLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLA 164
Query: 218 -STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
               +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F   
Sbjct: 165 HKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGD 219
Query: 273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
              E LA +  V               A+ ++RR  +  P+    R +I+  ++ P ++ 
Sbjct: 220 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK---KRMTIQDSLQHPWIKP 276
Query: 333 LIMQHVDHSA 342
              Q    SA
Sbjct: 277 KDTQQALSSA 286

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 54/274 (19%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLAKHD 100
           ++G G F  V +C ++      A K +         RG+   RE    E+ +L+++   +
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIEREVSILKEIQHPN 75
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +   ++ +  + ++ E + G  L+DFL +    S   +   E  +Q+L  + 
Sbjct: 76  -----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVY 128
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-- 217
           ++H L + H DLKPEN++L+                       + +PK   IK+IDFG  
Sbjct: 129 YLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLA 165
Query: 218 -STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
               +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F   
Sbjct: 166 HKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGD 220
Query: 273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
              E LA +  V               A+ ++RR
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 46/270 (17%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLAKHD 100
           ++G G F  V +C ++      A K +         RG+   RE    E+ +L+++   +
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIEREVSILKEIQHPN 75
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +   ++ +  + ++ E + G  L+DFL +    S   +   E  +Q+L  + 
Sbjct: 76  -----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVY 128
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-- 217
           ++H L + H DLKPEN++L+                       + +PK   IK+IDFG  
Sbjct: 129 YLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLA 165
Query: 218 -STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
               +    +N I  T  + APE++         D+WS+G I   L +G + F      E
Sbjct: 166 HKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
            LA +  V               A+ ++RR
Sbjct: 225 TLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 45/214 (21%)
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H+  ++H DL P N+LL  +  I + D+  +     D+                     
Sbjct: 150 LHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA--------------------- 188
Query: 221 YERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
               ++ + V+ R YRAPE+++   G+T   D+WS GC++ E+   +ALF+       L 
Sbjct: 189 ----NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN 244
Query: 280 MMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  V+G P  + ++      A  Y+R    + P                R    ++   
Sbjct: 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPA---------------RAWTAVVPTA 289
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           D  A D   L+  +L ++P  R++  +ALRHP+F
Sbjct: 290 DPVALD---LIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 45/214 (21%)
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H+  ++H DL P N+LL  +  I + D+  +     D+                     
Sbjct: 150 LHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA--------------------- 188
Query: 221 YERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
               ++ + V+ R YRAPE+++   G+T   D+WS GC++ E+   +ALF+       L 
Sbjct: 189 ----NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN 244
Query: 280 MMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +  V+G P  + ++      A  Y+R    + P                R    ++   
Sbjct: 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPA---------------RAWTAVVPTA 289
Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           D  A D   L+  +L ++P  R++  +ALRHP+F
Sbjct: 290 DPVALD---LIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 54/274 (19%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLAKHD 100
           ++G G F  V +C ++      A K +         RG+   RE    E+ +L+++   +
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIEREVSILKEIQHPN 75
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +   ++ +  + ++ E + G  L+DFL +    S   +   E  +Q+L  + 
Sbjct: 76  -----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVY 128
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-- 217
           ++H L + H DLKPEN++L+                       + +PK   IK+IDFG  
Sbjct: 129 YLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLA 165
Query: 218 -STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
               +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F   
Sbjct: 166 HKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGD 220
Query: 273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
              E LA +  V               A+ ++RR
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 94/222 (42%), Gaps = 39/222 (17%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           ++G+G+FG+V +  D   KE+VAIKI+     +   E    EI VL Q        +   
Sbjct: 26  RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC-------DSPY 78
Query: 108 QIRNWFDY--RNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
             R +  Y     + I+ E LG  S  D L+           +  I R++L+ + ++H  
Sbjct: 79  ITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEE---TYIATILREILKGLDYLHSE 135
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH D+K  NVLL     +K+ D+  +                        G  T  + 
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLTDTQI 171
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
            +N  V T  + APEVI    + +  DIWS+G   +EL  GE
Sbjct: 172 KRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 46/270 (17%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLAKHD 100
           ++G G F  V +C ++      A K +         RG+   RE    E+ +L+++   +
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIEREVSILKEIQHPN 75
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +   ++ +  + ++ E + G  L+DFL +    S   +   E  +Q+L  + 
Sbjct: 76  -----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVY 128
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-- 217
           ++H L + H DLKPEN++L+                       + +PK   IK+IDFG  
Sbjct: 129 YLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLA 165
Query: 218 -STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
               +    +N I  T  + APE++         D+WS+G I   L +G + F      E
Sbjct: 166 HKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
            LA +  V               A+ ++RR
Sbjct: 225 TLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 128/338 (37%), Gaps = 84/338 (24%)
Query: 43  FAD--KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD 100
           F D  ++   +G G++     C  +      A+KI   I K +     EIE+L +  +H 
Sbjct: 20  FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKI---IDKSKRDPTEEIEILLRYGQHP 76
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +++ +D   ++ +V E + G  L D + +  +  F       +   + + + 
Sbjct: 77  N----IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTITKTVE 130
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   ++H DLKP N+L                       Y        +I++ DFG  
Sbjct: 131 YLHAQGVVHRDLKPSNIL-----------------------YVDESGNPESIRICDFGFA 167
Query: 220 TYERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
              R +   +++   T ++ APEV+   G+   CDIWS+G +L  + TG   F       
Sbjct: 168 KQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN----- 222
Query: 277 HLAMMERVLGP--LPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
                    GP   P+ +L R+          G+     G                    
Sbjct: 223 ---------GPDDTPEEILARIG--------SGKFSLSGG-------------------Y 246
Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
              V  +A D   L+  +L  DP  RLTA   LRHP+ 
Sbjct: 247 WNSVSDTAKD---LVSKMLHVDPHQRLTAALVLRHPWI 281

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 41/234 (17%)
Query: 41  SAFADKIH-------SKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIE 91
           S+ AD  H         +GEG+FG+V   +     + VA+KI+  + + K      IE E
Sbjct: 4   SSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIERE 63
Query: 92  V-LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 150
           +   +L +H       +++ +    ++ I +V E  G+ L+D++ + +  S      R  
Sbjct: 64  ISYLRLLRHP----HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRF 117
Query: 151 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 210
            +Q++  + + H   ++H DLKPEN+LL     +K+ D+  S +   D ++ K       
Sbjct: 118 FQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT------ 170
Query: 211 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC 263
                 GS  Y  P+   ++S + Y  PEV          D+WS G IL V LC
Sbjct: 171 ----SCGSPNYAAPE---VISGKLYAGPEV----------DVWSCGVILYVMLC 207

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-EAAMIEIEVLQQLAKHDKGGN 104
           +I  ++G+G FG+V +  ++E   + A K++    +   E  M+EI++L      +    
Sbjct: 40  EIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN---- 95
Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
             V++ + F Y N++ I+ E       D +     R      ++ + +Q L+ + ++HD 
Sbjct: 96  -IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +IH DLK  N+L      IK+ D+  S    +                      T +R 
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR----------------------TIQRR 192
Query: 225 DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 266
           D    + T ++ APEV++        + Y  D+WS+G  L+E+   E
Sbjct: 193 DS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 41/234 (17%)
Query: 41  SAFADKIH-------SKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIE 91
           S+ AD  H         +GEG+FG+V   +     + VA+KI+  + + K      IE E
Sbjct: 5   SSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIERE 64
Query: 92  V-LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 150
           +   +L +H       +++ +    ++ I +V E  G+ L+D++ + +  S      R  
Sbjct: 65  ISYLRLLRHP----HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRF 118
Query: 151 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 210
            +Q++  + + H   ++H DLKPEN+LL     +K+ D+  S +   D ++ K       
Sbjct: 119 FQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT------ 171
Query: 211 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC 263
                 GS  Y  P+   ++S + Y  PEV          D+WS G IL V LC
Sbjct: 172 ----SCGSPNYAAPE---VISGKLYAGPEV----------DVWSCGVILYVMLC 208

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 44/269 (16%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLAKHD 100
           ++G G F  V +C  +   +  A K +         RG+   RE    E+ +L+++ +H 
Sbjct: 33  ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVS--REEIEREVNILREI-RHP 89
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + + + F+ +  + ++ E + G  L+DFL +    S   D   +  +Q+L+ + 
Sbjct: 90  N----IITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVH 143
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   + H DLKPEN++L+      VP+       P+             IK+IDFG  
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDK---NVPN-------PR-------------IKLIDFGIA 180
Query: 220 TYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
                   +  I  T  + APE++         D+WS+G I   L +G + F      E 
Sbjct: 181 HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET 240
Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
           L  +  V     +         A+ ++RR
Sbjct: 241 LTNISAVNYDFDEEYFSNTSELAKDFIRR 269

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 46/270 (17%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLAKHD 100
           ++G G F  V +C ++      A K +         RG+   RE    E+ +L+++   +
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIEREVSILKEIQHPN 75
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +   ++ +  + ++ E + G  L+DFL +    S   +   E  +Q+L  + 
Sbjct: 76  -----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVY 128
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-- 217
           ++H L + H DLKPEN++L+                       + +PK   IK+IDFG  
Sbjct: 129 YLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLA 165
Query: 218 -STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
               +    +N I  T  + APE++         D+WS+G I   L +G + F      E
Sbjct: 166 HKIDFGNEFKN-IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
            LA +  V               A+ ++RR
Sbjct: 225 TLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 102/227 (44%), Gaps = 35/227 (15%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-EAAMIEIEVLQQLAKHDKGGN 104
           +I  ++G+G FG+V +  ++E   + A K++    +   E  M+EI++L      +    
Sbjct: 40  EIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN---- 95
Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
             V++ + F Y N++ I+ E       D +     R      ++ + +Q L+ + ++HD 
Sbjct: 96  -IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +IH DLK  N+L      IK+ D+  S    K++   +R                    
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQR-------------------- 191
Query: 225 DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 266
            ++  + T ++ APEV++        + Y  D+WS+G  L+E+   E
Sbjct: 192 -RDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 57/310 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLAKHD 100
           ++G G F  V +C ++      A K +         RG+   RE    E+ +L+++   +
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIEREVSILKEIQHPN 75
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +   ++ +  + ++ E + G  L+DFL +    S   +   E  +Q+L  + 
Sbjct: 76  -----VITLHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVY 128
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-- 217
           ++H L + H DLKPEN++L+                       + +PK   IK+IDFG  
Sbjct: 129 YLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLA 165
Query: 218 -STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
               +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F   
Sbjct: 166 HKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGD 220
Query: 273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
              E LA +  V               A+ ++RR  +  P+    R +I+  ++ P ++ 
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK---KRMTIQDSLQHPWIKP 277
Query: 333 LIMQHVDHSA 342
              Q    SA
Sbjct: 278 KDTQQALSSA 287

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 102/227 (44%), Gaps = 35/227 (15%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-EAAMIEIEVLQQLAKHDKGGN 104
           +I  ++G+G FG+V +  ++E   + A K++    +   E  M+EI++L      +    
Sbjct: 40  EIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN---- 95
Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
             V++ + F Y N++ I+ E       D +     R      ++ + +Q L+ + ++HD 
Sbjct: 96  -IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +IH DLK  N+L      IK+ D+  S    K++   +R                    
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQR-------------------- 191
Query: 225 DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 266
            ++  + T ++ APEV++        + Y  D+WS+G  L+E+   E
Sbjct: 192 -RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 133/327 (40%), Gaps = 73/327 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK--HDKGGNRCVQ 108
           +G+G F  V  C +RE  +  A+KIV  + K+  +  +  E L++ A   H       V+
Sbjct: 34  IGKGPFSVVRRCINRETGQQFAVKIVD-VAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 109 IRNWFDYRNHICIVFEKL-GSSL-YDFLRKNNYR-SFPIDLVREIARQLLECIAFMHDLC 165
           +   +     + +VFE + G+ L ++ +++ +    +   +     RQ+LE + + HD  
Sbjct: 93  LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 152
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IH D+KP  VLL S E               +S+  K      AI++ + G     R  
Sbjct: 153 IIHRDVKPHCVLLASKE---------------NSAPVKLGGFGVAIQLGESGLVAGGR-- 195
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
               V T H+ APEV+    +  P D+W  G IL  L +G         L      ER+ 
Sbjct: 196 ----VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG--------CLPFYGTKERLF 243
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                                      EG      IK   K+   Q     H+  SA D 
Sbjct: 244 ---------------------------EGI-----IKGKYKMNPRQ---WSHISESAKD- 267
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFF 372
             L++ +L  DP +R+T  EAL HP+ 
Sbjct: 268 --LVRRMLMLDPAERITVYEALNHPWL 292

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 133/327 (40%), Gaps = 73/327 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK--HDKGGNRCVQ 108
           +G+G F  V  C +RE  +  A+KIV  + K+  +  +  E L++ A   H       V+
Sbjct: 32  IGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 109 IRNWFDYRNHICIVFEKL-GSSL-YDFLRKNNYR-SFPIDLVREIARQLLECIAFMHDLC 165
           +   +     + +VFE + G+ L ++ +++ +    +   +     RQ+LE + + HD  
Sbjct: 91  LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IH D+KP  VLL S E               +S+  K      AI++ + G     R  
Sbjct: 151 IIHRDVKPHCVLLASKE---------------NSAPVKLGGFGVAIQLGESGLVAGGR-- 193
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
               V T H+ APEV+    +  P D+W  G IL  L +G         L      ER+ 
Sbjct: 194 ----VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG--------CLPFYGTKERLF 241
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                                      EG      IK   K+   Q     H+  SA D 
Sbjct: 242 ---------------------------EGI-----IKGKYKMNPRQ---WSHISESAKD- 265
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFF 372
             L++ +L  DP +R+T  EAL HP+ 
Sbjct: 266 --LVRRMLMLDPAERITVYEALNHPWL 290

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 112/269 (41%), Gaps = 44/269 (16%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLAKHD 100
           ++G G F  V +C  +   +  A K +         RG+   RE    E+ +L+++ +H 
Sbjct: 19  ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVS--REEIEREVNILREI-RHP 75
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + + + F+ +  + ++ E + G  L+DFL +    S   D   +  +Q+L+ + 
Sbjct: 76  N----IITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVH 129
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   + H DLKPEN++L+      VP+ +                    IK+IDFG  
Sbjct: 130 YLHSKRIAHFDLKPENIMLLDK---NVPNPR--------------------IKLIDFGIA 166
Query: 220 TYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
                   +  I  T  + APE++         D+WS+G I   L +G + F      E 
Sbjct: 167 HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET 226
Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
           L  +  V     +         A+ ++RR
Sbjct: 227 LTNISAVNYDFDEEYFSNTSELAKDFIRR 255

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 112/269 (41%), Gaps = 44/269 (16%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLAKHD 100
           ++G G F  V +C  +   +  A K +         RG+   RE    E+ +L+++ +H 
Sbjct: 12  ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVS--REEIEREVNILREI-RHP 68
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + + + F+ +  + ++ E + G  L+DFL +    S   D   +  +Q+L+ + 
Sbjct: 69  N----IITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVH 122
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   + H DLKPEN++L+      VP+ +                    IK+IDFG  
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDK---NVPNPR--------------------IKLIDFGIA 159
Query: 220 TYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
                   +  I  T  + APE++         D+WS+G I   L +G + F      E 
Sbjct: 160 HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET 219
Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
           L  +  V     +         A+ ++RR
Sbjct: 220 LTNISAVNYDFDEEYFSNTSELAKDFIRR 248

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 135/329 (41%), Gaps = 89/329 (27%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAM-IEIEVLQQLAKHDKGGNRCVQI 109
           +G G F +V     R   ++ A+K ++    +R++++  EI VL+++ KH+      V +
Sbjct: 17  LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI-KHE----NIVTL 71
Query: 110 RNWFDYRNHICIVFEKL-GSSLYD-FLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
            + ++   H  +V + + G  L+D  L +  Y      LV    +Q+L  + ++H+  ++
Sbjct: 72  EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLV---IQQVLSAVKYLHENGIV 128
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DLKPEN+L ++ E                        ++S I + DFG +  E   QN
Sbjct: 129 HRDLKPENLLYLTPE------------------------ENSKIMITDFGLSKME---QN 161
Query: 228 YIVSTR----HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
            I+ST      Y APEV+    ++   D WS+G I   L  G   F  +E  E       
Sbjct: 162 GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF--YEETES------ 213
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
                     K  ++  E Y       W +                        +  SA 
Sbjct: 214 ----------KLFEKIKEGYYEFESPFWDD------------------------ISESAK 239
Query: 344 D-LTHLLQGLLRYDPTDRLTAREALRHPF 371
           D + HLL+     DP +R T  +AL HP+
Sbjct: 240 DFICHLLEK----DPNERYTCEKALSHPW 264

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 34/222 (15%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEV-LQQLAKHDKG 102
           +I   +GEG+FG+V   +     + VA+KI+  + + K      IE E+   +L +H   
Sbjct: 7   QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP-- 64
Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
               +++ +    ++ I +V E  G+ L+D++ + +  S      R   +Q++  + + H
Sbjct: 65  --HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVEYCH 120
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              ++H DLKPEN+LL     +K+ D+  S +   D ++ K             GS  Y 
Sbjct: 121 RHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSPNYA 169
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC 263
            P+   ++S + Y  PEV          D+WS G IL V LC
Sbjct: 170 APE---VISGKLYAGPEV----------DVWSCGVILYVMLC 198

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 34/222 (15%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEV-LQQLAKHDKG 102
           +I   +GEG+FG+V   +     + VA+KI+  + + K      IE E+   +L +H   
Sbjct: 11  QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP-- 68
Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
               +++ +    ++ I +V E  G+ L+D++ + +  S      R   +Q++  + + H
Sbjct: 69  --HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVEYCH 124
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              ++H DLKPEN+LL     +K+ D+  S +   D ++ K             GS  Y 
Sbjct: 125 RHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSPNYA 173
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC 263
            P+   ++S + Y  PEV          D+WS G IL V LC
Sbjct: 174 APE---VISGKLYAGPEV----------DVWSCGVILYVMLC 202

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 136/336 (40%), Gaps = 94/336 (27%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR--------------GIKKYREAAMIEIEVLQQ 95
           K+G G +G+VL C ++      AIK+++               I+K+ E    EI +L+ 
Sbjct: 43  KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 96  LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 154
           L   +      +++ + F+ + +  +V E   G  L++ +   N   F       I +Q+
Sbjct: 103 LDHPN-----IIKLFDVFEDKKYFYLVTEFYEGGELFEQII--NRHKFDECDAANIMKQI 155
Query: 155 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
           L  I ++H   ++H D+KPEN+LL +         K+SL                 IK++
Sbjct: 156 LSGICYLHKHNIVHRDIKPENILLEN---------KNSLLN---------------IKIV 191
Query: 215 DFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
           DFG +++   D      + T +Y APEV L   +   CD+WS G I+  L  G   F   
Sbjct: 192 DFGLSSFFSKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPPFG-- 248
Query: 273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
                        G   Q ++K+V++   KY      D+ +     +  K ++KL     
Sbjct: 249 -------------GQNDQDIIKKVEKG--KYY----FDFNDWKNISDEAKELIKL----- 284
Query: 333 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 368
                              +L YD   R TA EAL 
Sbjct: 285 -------------------MLTYDYNKRCTAEEALN 301

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 151/367 (41%), Gaps = 77/367 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV-RGIKKYREAAMI--EIEVLQQLAK------HDK 101
           +G G++G V   +D+   + VAIK V R  +   +   I  EI +L +L        HD 
Sbjct: 36  IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHD- 94
Query: 102 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDL----VREIARQLLEC 157
                +   +   + + + IV E   S L    +       PI L    V+ I   LL  
Sbjct: 95  ----LIIPEDLLKF-DELYIVLEIADSDLKKLFKT------PIFLTEQHVKTILYNLLLG 143
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSSAIKVID 215
             F+H+  +IH DLKP N LL     +K+ D+    ++++ KD      + +    +   
Sbjct: 144 EKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPG 203
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVI-LGLGWTYPCDIWSVGCILVELCT---------- 264
             +   ++   +++V TR YRAPE+I L   +T   DIWS GCI  EL            
Sbjct: 204 PHNKNLKKQLTSHVV-TRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPT 262
Query: 265 -------GEALF---------QTHE--NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
                  G + F         + HE  N + L ++  V+G  P+  LK + +        
Sbjct: 263 NRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITK-------- 314
Query: 307 GRLDWPEGAASRESIKSVMKLPRLQNL-IMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 365
                      +E IK +   P    + + +     + +   LL+ +LR++   R+T  +
Sbjct: 315 -----------QEVIKYIKLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDK 363
Query: 366 ALRHPFF 372
           AL HP+ 
Sbjct: 364 ALSHPYL 370

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 108/247 (43%), Gaps = 51/247 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           +G+GT+G V    D   +  +AIK I     +Y +    EI     L KH K  N  VQ 
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEI----ALHKHLKHKN-IVQY 84
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLR------KNNYRSFPIDLVREIARQLLECIAFMH 162
              F     I I  E++ G SL   LR      K+N ++          +Q+LE + ++H
Sbjct: 85  LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-----YTKQILEGLKYLH 139
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST--- 219
           D  ++H D+K +NVL+                    ++Y      S  +K+ DFG++   
Sbjct: 140 DNQIVHRDIKGDNVLI--------------------NTY------SGVLKISDFGTSKRL 173
Query: 220 TYERPDQNYIVSTRHYRAPEVI--LGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
               P       T  Y APE+I     G+    DIWS+GC ++E+ TG+  F  +E  E 
Sbjct: 174 AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF--YELGEP 231
Query: 278 LAMMERV 284
            A M +V
Sbjct: 232 QAAMFKV 238

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 108/247 (43%), Gaps = 51/247 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           +G+GT+G V    D   +  +AIK I     +Y +    EI     L KH K  N  VQ 
Sbjct: 16  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEI----ALHKHLKHKN-IVQY 70
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLR------KNNYRSFPIDLVREIARQLLECIAFMH 162
              F     I I  E++ G SL   LR      K+N ++          +Q+LE + ++H
Sbjct: 71  LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-----YTKQILEGLKYLH 125
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST--- 219
           D  ++H D+K +NVL+                    ++Y      S  +K+ DFG++   
Sbjct: 126 DNQIVHRDIKGDNVLI--------------------NTY------SGVLKISDFGTSKRL 159
Query: 220 TYERPDQNYIVSTRHYRAPEVI--LGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
               P       T  Y APE+I     G+    DIWS+GC ++E+ TG+  F  +E  E 
Sbjct: 160 AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF--YELGEP 217
Query: 278 LAMMERV 284
            A M +V
Sbjct: 218 QAAMFKV 224

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 63/306 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ-- 108
           +G+GTFG+V+   ++      A+KI++     +E  + + EV   L +     NR +Q  
Sbjct: 18  LGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTE-----NRVLQNS 67
Query: 109 -------IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                  ++  F   + +C V E   G  L+  L +   R F  D  R    +++  + +
Sbjct: 68  RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDY 125
Query: 161 MH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           +H +  +++ DLK EN++L    +IK+ D+       KD +  K                
Sbjct: 126 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--------------- 170
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEH 277
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 171 ---------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 221
Query: 278 LAMME-----RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
           L +ME     R LGP  + +L  + +   K     RL    G  S E  K +M+      
Sbjct: 222 LILMEEIRFPRTLGPEAKSLLSGLLKKDPKQ----RL----GGGS-EDAKEIMQHRFFAG 272
Query: 333 LIMQHV 338
           ++ QHV
Sbjct: 273 IVWQHV 278

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 63/306 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ-- 108
           +G+GTFG+V+   ++      A+KI++     +E  + + EV   L +     NR +Q  
Sbjct: 17  LGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTE-----NRVLQNS 66
Query: 109 -------IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                  ++  F   + +C V E   G  L+  L +   R F  D  R    +++  + +
Sbjct: 67  RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDY 124
Query: 161 MH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           +H +  +++ DLK EN++L    +IK+ D+       KD +  K                
Sbjct: 125 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--------------- 169
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEH 277
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 170 ---------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 220
Query: 278 LAMME-----RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
           L +ME     R LGP  + +L  + +   K     RL    G  S E  K +M+      
Sbjct: 221 LILMEEIRFPRTLGPEAKSLLSGLLKKDPKQ----RL----GGGS-EDAKEIMQHRFFAG 271
Query: 333 LIMQHV 338
           ++ QHV
Sbjct: 272 IVWQHV 277

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 131/335 (39%), Gaps = 81/335 (24%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEV-LQQLAKHDKGG 103
           +++  +G+G F  V  C         A KI+   K   R+   +E E  + +L KH    
Sbjct: 7   QLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH---- 62
Query: 104 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
           +  V++ +         +VF+ + G  L++ +    Y S   D    I +Q+LE +   H
Sbjct: 63  SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI-QQILEAVLHCH 120
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
            + ++H DLKPEN+LL S                          K +A+K+ DFG     
Sbjct: 121 QMGVVHRDLKPENLLLASK------------------------CKGAAVKLADFGLAIEV 156
Query: 223 RPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           + DQ        T  Y +PEV+    +  P DIW+ G IL  L  G   F   +      
Sbjct: 157 QGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDED------ 210
Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
                     QH L        + ++ G  D+P       S +     P  +NLI Q   
Sbjct: 211 ----------QHKLY-------QQIKAGAYDFP-------SPEWDTVTPEAKNLINQ--- 243
Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                       +L  +P  R+TA EAL+HP+  +
Sbjct: 244 ------------MLTINPAKRITAHEALKHPWVCQ 266

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 124/306 (40%), Gaps = 63/306 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ-- 108
           +G+GTFG+V+   ++      A+KI++     +E  + + EV   L +     NR +Q  
Sbjct: 16  LGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTE-----NRVLQNS 65
Query: 109 -------IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                  ++  F   + +C V E   G  L+  L +   R F  D  R    +++  + +
Sbjct: 66  RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDY 123
Query: 161 MH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           +H +  +++ DLK EN++L    +IK+ D+       KD +  K                
Sbjct: 124 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--------------- 168
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEH 277
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 169 ---------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 219
Query: 278 LAMME-----RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
           L +ME     R LGP  + +L  + +   K     RL         E  K +M+      
Sbjct: 220 LILMEEIRFPRTLGPEAKSLLSGLLKKDPKQ----RL-----GGGSEDAKEIMQHRFFAG 270
Query: 333 LIMQHV 338
           ++ QHV
Sbjct: 271 IVWQHV 276

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           K+  K+G G FG+V +  +++  K  VA+K ++      EA + E  V++ L +HDK   
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEANVMKTL-QHDK--- 244
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             V++      +  I I+ E +   SL DFL+ +     P+  + + + Q+ E +AF+  
Sbjct: 245 -LVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              IH DL+  N+L+ +S   K+ D+  +    +D+ Y  R      IK           
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIADFGLA-RVIEDNEYTAREGAKFPIK----------- 350
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE I    +T   D+WS G +L+E+ T G   +    N E +  +E
Sbjct: 351 -----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 399
Query: 283 R 283
           R
Sbjct: 400 R 400

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 114/273 (41%), Gaps = 46/273 (16%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQLA 97
           I  ++G G F  V +C ++      A K +         RG+   RE    E+ +L+Q+ 
Sbjct: 16  IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGV--CREEIEREVSILRQVL 73
Query: 98  KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
             +      + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+
Sbjct: 74  HPN-----IITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + ++H   + H DLKPEN++L+    I +P                       IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 217 GSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
           G   +E  D      I  T  + APE++         D+WS+G I   L +G + F    
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
             E LA +  V     +    +    A+ ++R+
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 35/255 (13%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHDKGGNRC 106
           +G+G FG+V  C  R   +M A K +   +  +      A+ E ++L+++          
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-----NSRFV 246
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V +   ++ ++ +C+V   + G  L   +       FP       A ++   +  +H   
Sbjct: 247 VSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER 306
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ DLKPEN+LL    +I++ D   ++H P+                   G T   R  
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPE-------------------GQTIKGR-- 345
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
               V T  Y APEV+    +T+  D W++GC+L E+  G++ FQ  +       +ER++
Sbjct: 346 ----VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV 401
Query: 286 GPLPQHMLKRVDRHA 300
             +P+   +R    A
Sbjct: 402 KEVPEEYSERFSPQA 416

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           K+  K+G G FG+V +  +++  K  VA+K ++      EA + E  V++ L +HDK   
Sbjct: 18  KLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEANVMKTL-QHDK--- 71
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             V++      +  I I+ E +   SL DFL+ +     P+  + + + Q+ E +AF+  
Sbjct: 72  -LVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 129
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              IH DL+  N+L+ +S   K+ D+  +    +D+ Y  R      IK           
Sbjct: 130 RNYIHRDLRAANILVSASLVCKIADFGLA-RVIEDNEYTAREGAKFPIK----------- 177
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE I    +T   D+WS G +L+E+ T G   +    N E +  +E
Sbjct: 178 -----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 226
Query: 283 R 283
           R
Sbjct: 227 R 227

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 135/335 (40%), Gaps = 91/335 (27%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKY-REAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G F +  E  D + KE+ A KIV     +K + RE   +EI + + LA         
Sbjct: 47  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-----HV 101
Query: 107 VQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V    +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H   
Sbjct: 102 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 159
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT---YE 222
           +IH DLK  N+ L  +E ++V                         K+ DFG  T   Y+
Sbjct: 160 VIHRDLKLGNLFL--NEDLEV-------------------------KIGDFGLATKVEYD 192
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
              +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T           
Sbjct: 193 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET----------- 241
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
                     LK      E Y+R  + ++                      I +H++  A
Sbjct: 242 --------SCLK------ETYLRIKKNEYS---------------------IPKHINPVA 266
Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
                L+Q +L+ DPT R T  E L   FFT  ++
Sbjct: 267 AS---LIQKMLQTDPTARPTINELLNDEFFTSGYI 298

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 135/335 (40%), Gaps = 91/335 (27%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKY-REAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G F +  E  D + KE+ A KIV     +K + RE   +EI + + LA         
Sbjct: 29  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-----HV 83
Query: 107 VQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V    +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H   
Sbjct: 84  VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 141
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT---YE 222
           +IH DLK  N+ L  +E ++V                         K+ DFG  T   Y+
Sbjct: 142 VIHRDLKLGNLFL--NEDLEV-------------------------KIGDFGLATKVEYD 174
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
              +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T           
Sbjct: 175 GERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET----------- 223
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
                     LK      E Y+R  + ++                      I +H++  A
Sbjct: 224 --------SCLK------ETYLRIKKNEYS---------------------IPKHINPVA 248
Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
                L+Q +L+ DPT R T  E L   FFT  ++
Sbjct: 249 AS---LIQKMLQTDPTARPTINELLNDEFFTSGYI 280

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 35/255 (13%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHDKGGNRC 106
           +G+G FG+V  C  R   +M A K +   +  +      A+ E ++L+++          
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-----NSRFV 246
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V +   ++ ++ +C+V   + G  L   +       FP       A ++   +  +H   
Sbjct: 247 VSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER 306
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ DLKPEN+LL    +I++ D   ++H P+                   G T   R  
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPE-------------------GQTIKGR-- 345
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
               V T  Y APEV+    +T+  D W++GC+L E+  G++ FQ  +       +ER++
Sbjct: 346 ----VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV 401
Query: 286 GPLPQHMLKRVDRHA 300
             +P+   +R    A
Sbjct: 402 KEVPEEYSERFSPQA 416

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 135/335 (40%), Gaps = 91/335 (27%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKY-REAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G F +  E  D + KE+ A KIV     +K + RE   +EI + + LA         
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-----HV 103
Query: 107 VQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V    +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H   
Sbjct: 104 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 161
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT---YE 222
           +IH DLK  N+ L  +E ++V                         K+ DFG  T   Y+
Sbjct: 162 VIHRDLKLGNLFL--NEDLEV-------------------------KIGDFGLATKVEYD 194
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
              +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T           
Sbjct: 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET----------- 243
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
                     LK      E Y+R  + ++                      I +H++  A
Sbjct: 244 --------SCLK------ETYLRIKKNEYS---------------------IPKHINPVA 268
Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
                L+Q +L+ DPT R T  E L   FFT  ++
Sbjct: 269 AS---LIQKMLQTDPTARPTINELLNDEFFTSGYI 300

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 63/306 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ-- 108
           +G+GTFG+V+   ++      A+KI++     +E  + + EV   L +     NR +Q  
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTE-----NRVLQNS 205
Query: 109 -------IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                  ++  F   + +C V E   G  L+  L +   R F  D  R    +++  + +
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDY 263
Query: 161 MH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           +H +  +++ DLK EN++L    +IK+ D+       KD +  K                
Sbjct: 264 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--------------- 308
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEH 277
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 309 ---------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 359
Query: 278 LAMME-----RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
           L +ME     R LGP  + +L  + +   K     RL    G  S E  K +M+      
Sbjct: 360 LILMEEIRFPRTLGPEAKSLLSGLLKKDPKQ----RL----GGGS-EDAKEIMQHRFFAG 410
Query: 333 LIMQHV 338
           ++ QHV
Sbjct: 411 IVWQHV 416

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 77/329 (23%), Positives = 130/329 (39%), Gaps = 76/329 (23%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI- 109
           +G G  G+VL+ +++  +E  A+K ++   K R     E+E L   A       R V + 
Sbjct: 70  LGLGINGKVLQIFNKRTQEKFALKXLQDCPKARR----EVE-LHWRASQCPHIVRIVDVY 124
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++H + + H
Sbjct: 125 ENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAH 184
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            D+KPEN+L  S    K P+                    + +K+ DFG    E    N 
Sbjct: 185 RDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK-ETTSHNS 219
Query: 229 IVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           + +   T +Y APEV+    +   CD WS+G I   L  G   F ++  L          
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLA--------- 270
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                     +    +  +R G+ ++P    S  S                       ++
Sbjct: 271 ----------ISPGXKTRIRXGQYEFPNPEWSEVS----------------------EEV 298
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFTR 374
             L++ LL+ +PT R T  E   HP+  +
Sbjct: 299 KXLIRNLLKTEPTQRXTITEFXNHPWIXQ 327

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 135/335 (40%), Gaps = 91/335 (27%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKY-REAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G F +  E  D + KE+ A KIV     +K + RE   +EI + + LA         
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-----HV 79
Query: 107 VQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V    +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H   
Sbjct: 80  VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 137
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT---YE 222
           +IH DLK  N+ L  +E ++V                         K+ DFG  T   Y+
Sbjct: 138 VIHRDLKLGNLFL--NEDLEV-------------------------KIGDFGLATKVEYD 170
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
              +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T           
Sbjct: 171 GERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET----------- 219
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
                     LK      E Y+R  + ++                      I +H++  A
Sbjct: 220 --------SCLK------ETYLRIKKNEYS---------------------IPKHINPVA 244
Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
                L+Q +L+ DPT R T  E L   FFT  ++
Sbjct: 245 AS---LIQKMLQTDPTARPTINELLNDEFFTSGYI 276

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 135/335 (40%), Gaps = 91/335 (27%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKY-REAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G F +  E  D + KE+ A KIV     +K + RE   +EI + + LA         
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-----HV 79
Query: 107 VQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V    +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H   
Sbjct: 80  VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 137
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT---YE 222
           +IH DLK  N+ L  +E ++V                         K+ DFG  T   Y+
Sbjct: 138 VIHRDLKLGNLFL--NEDLEV-------------------------KIGDFGLATKVEYD 170
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
              +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T           
Sbjct: 171 GERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET----------- 219
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
                     LK      E Y+R  + ++                      I +H++  A
Sbjct: 220 --------SCLK------ETYLRIKKNEYS---------------------IPKHINPVA 244
Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
                L+Q +L+ DPT R T  E L   FFT  ++
Sbjct: 245 AS---LIQKMLQTDPTARPTINELLNDEFFTSGYI 276

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           K+G+G+FG+V +  D   +++VAIKI+     +   E    EI VL Q            
Sbjct: 29  KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYVT 83
Query: 108 QIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPID--LVREIARQLLECIAFMHDL 164
           +    +     + I+ E LG  S  D L        P+D   +  I R++L+ + ++H  
Sbjct: 84  KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE 138
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH D+K  NVLL     +K+ D+  +                        G  T  + 
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLTDTQI 174
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
            +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 175 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 63/306 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ-- 108
           +G+GTFG+V+   ++      A+KI++     +E  + + EV   L +     NR +Q  
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTE-----NRVLQNS 208
Query: 109 -------IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                  ++  F   + +C V E   G  L+  L +   R F  D  R    +++  + +
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDY 266
Query: 161 MH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           +H +  +++ DLK EN++L    +IK+ D+       KD +  K                
Sbjct: 267 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--------------- 311
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEH 277
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 312 ---------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 362
Query: 278 LAMME-----RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
           L +ME     R LGP  + +L  + +   K     RL    G  S E  K +M+      
Sbjct: 363 LILMEEIRFPRTLGPEAKSLLSGLLKKDPKQ----RL----GGGS-EDAKEIMQHRFFAG 413
Query: 333 LIMQHV 338
           ++ QHV
Sbjct: 414 IVWQHV 419

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 76/339 (22%), Positives = 125/339 (36%), Gaps = 86/339 (25%)
Query: 43  FAD--KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD 100
           F D  ++   +G G++     C  +      A+KI   I K +     EIE+L +  +H 
Sbjct: 20  FTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKI---IDKSKRDPTEEIEILLRYGQHP 76
Query: 101 KGGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
                 + +++ +D   ++ +V E  K G  L   LR+   + F       +   + + +
Sbjct: 77  N----IITLKDVYDDGKYVYVVTELXKGGELLDKILRQ---KFFSEREASAVLFTITKTV 129
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            ++H   ++H DLKP N+L                       Y        +I++ DFG 
Sbjct: 130 EYLHAQGVVHRDLKPSNIL-----------------------YVDESGNPESIRICDFGF 166
Query: 219 TTYERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
               R +   + +   T ++ APEV+   G+   CDIWS+G +L    TG   F      
Sbjct: 167 AKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFAN---- 222
Query: 276 EHLAMMERVLGP--LPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 333
                     GP   P+ +L R+          G+     G                   
Sbjct: 223 ----------GPDDTPEEILARIG--------SGKFSLSGG------------------- 245
Query: 334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
               V  +A D   L+   L  DP  RLTA   LRHP+ 
Sbjct: 246 YWNSVSDTAKD---LVSKXLHVDPHQRLTAALVLRHPWI 281

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 132/332 (39%), Gaps = 85/332 (25%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKY-REAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G F +  E  D + KE+ A KIV     +K + RE   +EI + + LA         
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-----HV 77
Query: 107 VQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V    +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H   
Sbjct: 78  VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 135
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IH DLK  N+ L     +K+ D+                    A KV       Y+   
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDF------------------GLATKV------EYDGER 171
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T              
Sbjct: 172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET-------------- 217
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                  LK      E Y+R  + ++                      I +H++  A   
Sbjct: 218 -----SCLK------ETYLRIKKNEYS---------------------IPKHINPVAAS- 244
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
             L+Q +L+ DPT R T  E L   FFT  ++
Sbjct: 245 --LIQKMLQTDPTARPTINELLNDEFFTSGYI 274

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 73/339 (21%), Positives = 130/339 (38%), Gaps = 92/339 (27%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-----EIEVLQQLAKHD 100
           K+ + +G+G+F  V           VAIK++     Y+ A M+     E+++  QL KH 
Sbjct: 14  KVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-AGMVQRVQNEVKIHCQL-KHP 71
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                 +++ N+F+  N++ +V E   +   +   KN  + F  +  R    Q++  + +
Sbjct: 72  S----ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLY 127
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 219
           +H   ++H DL   N+LL                            ++  IK+ DFG +T
Sbjct: 128 LHSHGILHRDLTLSNLLLT---------------------------RNMNIKIADFGLAT 160
Query: 220 TYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
             + P + +  +  T +Y +PE+          D+WS+GC+   L  G   F T      
Sbjct: 161 QLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT------ 214
Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM-Q 336
                                                    +++K+ +    L +  M  
Sbjct: 215 -----------------------------------------DTVKNTLNKVVLADYEMPS 233
Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
            +   A DL H    LLR +P DRL+    L HPF +R+
Sbjct: 234 FLSIEAKDLIH---QLLRRNPADRLSLSSVLDHPFMSRN 269

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           K+G+G+FG+V +  D   +++VAIKI+     +   E    EI VL Q            
Sbjct: 14  KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYVT 68
Query: 108 QIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPID--LVREIARQLLECIAFMHDL 164
           +    +     + I+ E LG  S  D L        P+D   +  I R++L+ + ++H  
Sbjct: 69  KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE 123
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH D+K  NVLL     +K+ D+  +                        G  T  + 
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLTDTQI 159
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
            +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 160 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           K+G+G+FG+V +  D   +++VAIKI+     +   E    EI VL Q            
Sbjct: 14  KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYVT 68
Query: 108 QIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPID--LVREIARQLLECIAFMHDL 164
           +    +     + I+ E LG  S  D L        P+D   +  I R++L+ + ++H  
Sbjct: 69  KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE 123
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH D+K  NVLL     +K+ D+  +                        G  T  + 
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLTDTQI 159
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
            +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 160 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           K+G+G+FG+V +  D   +++VAIKI+     +   E    EI VL Q            
Sbjct: 34  KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYVT 88
Query: 108 QIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPID--LVREIARQLLECIAFMHDL 164
           +    +     + I+ E LG  S  D L        P+D   +  I R++L+ + ++H  
Sbjct: 89  KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE 143
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH D+K  NVLL     +K+ D+  +                        G  T  + 
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLTDTQI 179
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
            +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 180 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/330 (21%), Positives = 129/330 (39%), Gaps = 81/330 (24%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           +G G F +V+   ++   ++ A+K +  + +K    +   EI VL+++ KH+      V 
Sbjct: 30  LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI-KHE----NIVA 84
Query: 109 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           + + ++  NH+ +V + + G  L+D + +  +  +       + RQ+L+ + ++H + ++
Sbjct: 85  LEDIYESPNHLYLVMQLVSGGELFDRIVEKGF--YTEKDASTLIRQVLDAVYYLHRMGIV 142
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ- 226
           H DLKPEN+L  S +                        + S I + DFG +  E     
Sbjct: 143 HRDLKPENLLYYSQD------------------------EESKIMISDFGLSKMEGKGDV 178
Query: 227 -NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
            +    T  Y APEV+    ++   D WS+G I   L  G   F    +           
Sbjct: 179 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND----------- 227
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
             L + +LK        Y       W +                        +  SA D 
Sbjct: 228 SKLFEQILKAEYEFDSPY-------WDD------------------------ISDSAKD- 255
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFTRD 375
              ++ L+  DP  R T  +A RHP+   D
Sbjct: 256 --FIRNLMEKDPNKRYTCEQAARHPWIAGD 283

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 46/253 (18%)
Query: 51  MGEGTFGQVL---ECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+V    +    + +++ A+K+++    K R+    ++E            +  
Sbjct: 33  LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER-----------DIL 81
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRS-------FPIDLVREIARQLLECIA 159
           V++ + F  + H     E     + DFLR  +  +       F  + V+    +L   + 
Sbjct: 82  VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 141
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +H L +I+ DLKPEN+LL    +IK+ D+  S    K+S              ID    
Sbjct: 142 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES--------------IDHEKK 183
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
            Y          T  Y APEV+   G T   D WS G ++ E+ TG   FQ  +  E + 
Sbjct: 184 AYS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMT 237
Query: 280 MMERVLGPLPQHM 292
           M+ +    +PQ +
Sbjct: 238 MILKAKLGMPQFL 250

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 105/232 (45%), Gaps = 44/232 (18%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 65  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 119
Query: 101 KGGNRCVQIRNWFDYRNH--ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
              N    ++  F ++++  + +V E + G  ++  LR+    S P    R  A Q++  
Sbjct: 120 ---NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 174
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
             ++H L +I+ DLKPEN+L+    YI+V D+           + KR+  ++        
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVKGATWT------ 218
Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                      +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 219 -----------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 46/253 (18%)
Query: 51  MGEGTFGQVL---ECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+V    +    + +++ A+K+++    K R+    ++E            +  
Sbjct: 32  LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER-----------DIL 80
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRS-------FPIDLVREIARQLLECIA 159
           V++ + F  + H     E     + DFLR  +  +       F  + V+    +L   + 
Sbjct: 81  VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +H L +I+ DLKPEN+LL    +IK+ D+  S    K+S              ID    
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES--------------IDHEKK 182
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
            Y          T  Y APEV+   G T   D WS G ++ E+ TG   FQ  +  E + 
Sbjct: 183 AYS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMT 236
Query: 280 MMERVLGPLPQHM 292
           M+ +    +PQ +
Sbjct: 237 MILKAKLGMPQFL 249

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 117/285 (41%), Gaps = 32/285 (11%)
Query: 40  FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKH 99
           F+ F      ++G G F  V +C  +   +  A K    +KK R       E+L ++A  
Sbjct: 26  FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKF---LKKRRRGQDCRAEILHEIAVL 82
Query: 100 D--KGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
           +  K   R + +   ++  + I ++ E   G  ++             + V  + +Q+LE
Sbjct: 83  ELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILE 142
Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + ++H   ++H DLKP+N+LL            SS++   D            IK++DF
Sbjct: 143 GVYYLHQNNIVHLDLKPQNILL------------SSIYPLGD------------IKIVDF 178
Query: 217 GST--TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           G +       +   I+ T  Y APE++     T   D+W++G I   L T  + F   +N
Sbjct: 179 GMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN 238
Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRE 319
            E    + +V     +     V + A  +++   +  PE   + E
Sbjct: 239 QETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAE 283

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 46/253 (18%)
Query: 51  MGEGTFGQVL---ECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+V    +    + +++ A+K+++    K R+    ++E            +  
Sbjct: 32  LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER-----------DIL 80
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRS-------FPIDLVREIARQLLECIA 159
           V++ + F  + H     E     + DFLR  +  +       F  + V+    +L   + 
Sbjct: 81  VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +H L +I+ DLKPEN+LL    +IK+ D+  S    K+S              ID    
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES--------------IDHEKK 182
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
            Y          T  Y APEV+   G T   D WS G ++ E+ TG   FQ  +  E + 
Sbjct: 183 AYS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMT 236
Query: 280 MMERVLGPLPQHM 292
           M+ +    +PQ +
Sbjct: 237 MILKAKLGMPQFL 249

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 44/268 (16%)
Query: 47  IHSKMGEGTFGQV-LECWDRERKEMVAIKI----VRGIKKYREAAMIEIEVLQQLAKHDK 101
           + + +G G++G+V +      R    A KI    V  + ++++    EIE+++ L   + 
Sbjct: 30  LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQ----EIEIMKSLDHPN- 84
Query: 102 GGNRCVQIRNWFDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                +++   F+    I +V E   G  L++  R  + R F       I + +L  +A+
Sbjct: 85  ----IIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLSAVAY 138
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
            H L + H DLKPEN L ++      PD                    S +K+IDFG   
Sbjct: 139 CHKLNVAHRDLKPENFLFLTDS----PD--------------------SPLKLIDFGLAA 174
Query: 221 YERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
             +P +     V T +Y +P+V+ GL +   CD WS G ++  L  G   F    + E +
Sbjct: 175 RFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVM 233
Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRR 306
             +       P+     V   AE  +RR
Sbjct: 234 LKIREGTFTFPEKDWLNVSPQAESLIRR 261

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 44  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 98
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    
Sbjct: 99  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFE 155
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRT 195
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 196 WX-------LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 44/268 (16%)
Query: 47  IHSKMGEGTFGQV-LECWDRERKEMVAIKI----VRGIKKYREAAMIEIEVLQQLAKHDK 101
           + + +G G++G+V +      R    A KI    V  + ++++    EIE+++ L   + 
Sbjct: 13  LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQ----EIEIMKSLDHPN- 67
Query: 102 GGNRCVQIRNWFDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                +++   F+    I +V E   G  L++  R  + R F       I + +L  +A+
Sbjct: 68  ----IIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLSAVAY 121
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
            H L + H DLKPEN L ++      PD                    S +K+IDFG   
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDS----PD--------------------SPLKLIDFGLAA 157
Query: 221 YERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
             +P +     V T +Y +P+V+ GL +   CD WS G ++  L  G   F    + E +
Sbjct: 158 RFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVM 216
Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRR 306
             +       P+     V   AE  +RR
Sbjct: 217 LKIREGTFTFPEKDWLNVSPQAESLIRR 244

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 35/222 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG+V+    +E     A+KI   + K +   + +IE      +  +  N    ++
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKI---LDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVK 106
Query: 111 NWFDYRNH--ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
             F ++++  + +V E   G  ++  LR+    S P    R  A Q++    ++H L +I
Sbjct: 107 LEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDLI 164
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           + DLKPEN+L+    YIKV D+           + KR+           G T        
Sbjct: 165 YRDLKPENLLIDQQGYIKVADF----------GFAKRVK----------GRTWX------ 198
Query: 228 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
            +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 199 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 132/334 (39%), Gaps = 81/334 (24%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEV-LQQLAKHDKGG 103
           ++  ++G+G F  V  C      +  A KI+   K   R+   +E E  + +L KH    
Sbjct: 25  QLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN-- 82
Query: 104 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
              V++ +      H  ++F+ + G  L++ +    Y S   D    I +Q+LE +   H
Sbjct: 83  --IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-EADASHCI-QQILEAVLHCH 138
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTY 221
            + ++H DLKPEN+LL S                          K +A+K+ DFG +   
Sbjct: 139 QMGVVHRDLKPENLLLASK------------------------LKGAAVKLADFGLAIEV 174
Query: 222 ERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           E   Q +     T  Y +PEV+    +  P D+W+ G IL  L  G   F   +      
Sbjct: 175 EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED------ 228
Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
                     QH L        + ++ G  D+P               P    +  +  D
Sbjct: 229 ----------QHRLY-------QQIKAGAYDFPS--------------PEWDTVTPEAKD 257
Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                   L+  +L  +P+ R+TA EAL+HP+ +
Sbjct: 258 --------LINKMLTINPSKRITAAEALKHPWIS 283

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 40/237 (16%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 44  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 98
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    
Sbjct: 99  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFE 155
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRT 195
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                    +  T  Y APE+IL  G+    D W++G ++ E+  G   F   E ++
Sbjct: 196 WX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQ 245

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 44  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 98
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    
Sbjct: 99  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFE 155
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRT 195
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 196 WX-------LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/334 (21%), Positives = 131/334 (39%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++RK ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 8   EIGRPLGKGKFGNVYLAREKQRKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 65
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++ 
Sbjct: 66  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSYC 121
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 122 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 159
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 160 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 215
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 216 SRVEFTFPD------------FVTEGARD------------------------------- 232
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 233 ------LISRLLKHNPSQRPMLREVLEHPWITAN 260

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 113/267 (42%), Gaps = 57/267 (21%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA---------AMIEIEVLQQLAKH 99
           S +G G FG V    D+E+ + V +K ++  K   +            +EI +L ++   
Sbjct: 30  SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA 89
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
           +      +++ + F+ +    +V EK GS L  F   + +      L   I RQL+  + 
Sbjct: 90  N-----IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVG 144
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++    +IH D+K EN+++         D+                     IK+IDFGS 
Sbjct: 145 YLRLKDIIHRDIKDENIVIAE-------DF--------------------TIKLIDFGSA 177
Query: 220 TY-ERPDQNY-IVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALF-QTHENL 275
            Y ER    Y    T  Y APEV++G  +  P  ++WS+G  L  L   E  F +  E +
Sbjct: 178 AYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV 237
Query: 276 EH------------LAMMERVLGPLPQ 290
           E             ++++  +L P+P+
Sbjct: 238 EAAIHPPYLVSKELMSLVSGLLQPVPE 264

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 45  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 99
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    
Sbjct: 100 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFE 156
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRT 196
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 197 WX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 130/332 (39%), Gaps = 81/332 (24%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEV-LQQLAKHDKGG 103
           ++  ++G+G F  V  C  +   +  A KI+   K   R+   +E E  + +L KH    
Sbjct: 34  QLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN-- 91
Query: 104 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
              V++ +         +VF+ + G  L++ +    Y S   D    I  Q+LE +  +H
Sbjct: 92  --IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI-HQILESVNHIH 147
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              ++H DLKPEN+LL S                          K +A+K+ DFG     
Sbjct: 148 QHDIVHRDLKPENLLLASK------------------------CKGAAVKLADFGLAIEV 183
Query: 223 RPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           + +Q        T  Y +PEV+    +  P DIW+ G IL  L  G   F   +      
Sbjct: 184 QGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDED------ 237
Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
                     QH L        + ++ G  D+P       S +     P  +NLI Q   
Sbjct: 238 ----------QHKLY-------QQIKAGAYDFP-------SPEWDTVTPEAKNLINQ--- 270
Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                       +L  +P  R+TA +AL+HP+
Sbjct: 271 ------------MLTINPAKRITADQALKHPW 290

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 197
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 36/226 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAM-IEIEVLQQLAKHDKGGNRC 106
           +G+G F +  E  D + KE+ A K+V     +K +++  M  EI + + L          
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL-----DNPHV 104
Query: 107 VQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V    +F+  + + +V E     SL +  ++    + P    R   RQ ++ + ++H+  
Sbjct: 105 VGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQGVQYLHNNR 162
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IH DLK  N+ L     +K+ D+  +                     I+F     ER  
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATK-------------------IEFDG---ER-- 198
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +  +  T +Y APEV+   G ++  DIWS+GCIL  L  G+  F+T
Sbjct: 199 KKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 197
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 197
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 44  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 98
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    
Sbjct: 99  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFE 155
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRT 195
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 196 WX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 44  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 98
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    
Sbjct: 99  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFE 155
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRT 195
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 196 WX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 31  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 85
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    
Sbjct: 86  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFE 142
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T
Sbjct: 143 YLHSLDLIYRDLKPENLLIDEQGYIQVTDF----------GFAKRVK----------GRT 182
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 183 WX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 36/226 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAM-IEIEVLQQLAKHDKGGNRC 106
           +G+G F +  E  D + KE+ A K+V     +K +++  M  EI + + L          
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL-----DNPHV 104
Query: 107 VQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V    +F+  + + +V E     SL +  ++    + P    R   RQ ++ + ++H+  
Sbjct: 105 VGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQGVQYLHNNR 162
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IH DLK  N+ L     +K+ D+  +                     I+F     ER  
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATK-------------------IEFDG---ER-- 198
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +  +  T +Y APEV+   G ++  DIWS+GCIL  L  G+  F+T
Sbjct: 199 KKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 44  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 98
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    
Sbjct: 99  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFE 155
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRT 195
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 196 WX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 43/226 (19%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +       N  
Sbjct: 70  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-------NFP 122
Query: 107 VQIRNWFDYRNH--ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             ++  F ++++  + +V E + G  ++  LR+    S P    R  A Q++    ++H 
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHS 180
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           L +I+ DLKPEN+L+    YI+V D+           + KR+           G T    
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX-- 218
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 219 -----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 44  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 98
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    
Sbjct: 99  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFE 155
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRT 195
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 196 WX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 35/245 (14%)
Query: 50  KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           ++G G FG+V +  W+   K  VAIK ++      E+ + E +++++L KHDK     VQ
Sbjct: 16  RLGNGQFGEVWMGTWNGNTK--VAIKTLKPGTMSPESFLEEAQIMKKL-KHDK----LVQ 68
Query: 109 IRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +         I IV E +   SL DFL+    R+  +  + ++A Q+   +A++  +  I
Sbjct: 69  LYAVVS-EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI 127
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DL+  N+L+ +    K+ D+  +    +D+    R      IK               
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLA-RLIEDNEXTARQGAKFPIK--------------- 171
Query: 228 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLG 286
                  + APE  L   +T   D+WS G +L EL T G   +    N E L  +ER   
Sbjct: 172 -------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR 224
Query: 287 -PLPQ 290
            P PQ
Sbjct: 225 MPCPQ 229

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 36/247 (14%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGGN 104
           I   +G+G FG V    +R+ K ++A+K++   K   E A +E ++ ++  +  H +  N
Sbjct: 16  IGRPLGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 105 RCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++ H
Sbjct: 74  -ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--RFDEQRTATYITELANALSYCH 129
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH D+KPEN+LL S+  +K+ D+  S+H P                          
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR----------------------- 166
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
              ++ +  T  Y  PE+I G       D+WS+G +  E   G   F+ H   E    + 
Sbjct: 167 ---RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 283 RVLGPLP 289
           RV    P
Sbjct: 224 RVEFTFP 230

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YIKV D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADF----------GFAKRVK----------GRTWX---- 197
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 42  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 96
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 97  VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 154
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 190
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 191 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YIKV D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADF----------GFAKRVK----------GRTWX---- 197
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 104
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 162
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 198
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 199 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 104
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 162
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 198
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 199 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 104
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 162
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 198
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 199 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 130/332 (39%), Gaps = 80/332 (24%)
Query: 48  HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           + K+GEG+ G V    ++     VA+K++   K+ R   +    V+ +  +H       V
Sbjct: 50  YVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH----FNVV 105
Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++   +     + ++ E L G +L D + +       I  V E    +L+ +A++H   +
Sbjct: 106 EMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCE---AVLQALAYLHAQGV 162
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           IH D+K +++LL     +K+ D+       KD                         P +
Sbjct: 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV------------------------PKR 198
Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 286
             +V T ++ APEVI    +    DIWS+G +++E+  GE  + +               
Sbjct: 199 KXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS------------- 245
Query: 287 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD-L 345
             P   +KR+             D P               P+L+N       H     L
Sbjct: 246 --PVQAMKRLR------------DSPP--------------PKLKN------SHKVSPVL 271
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
              L+ +L  DP +R TA+E L HPF  +  L
Sbjct: 272 RDFLERMLVRDPQERATAQELLDHPFLLQTGL 303

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 95/231 (41%), Gaps = 43/231 (18%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+GEG+FG+ +     E      IK   I R   K RE +  E+ VL  + KH       
Sbjct: 31  KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHP----NI 85
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           VQ R  F+    + IV +   G  L+  +       F  D + +   Q+   +  +HD  
Sbjct: 86  VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK 145
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-----STT 220
           ++H D+K +N+ L                            K   +++ DFG     ++T
Sbjct: 146 ILHRDIKSQNIFLT---------------------------KDGTVQLGDFGIARVLNST 178
Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
            E       + T +Y +PE+     +    DIW++GC+L ELCT +  F+ 
Sbjct: 179 VEL--ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 104
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E   G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 105 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 162
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+++    YIKV D+           + KR+           G T      
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------GRTWX---- 198
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 199 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 36/247 (14%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGGN 104
           I   +G+G FG V    +R+ K ++A+K++   K   E A +E ++ ++  +  H +  N
Sbjct: 16  IGRPLGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 105 RCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++ H
Sbjct: 74  -ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--RFDEQRTATYITELANALSYCH 129
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH D+KPEN+LL S+  +K+ D+  S+H P                          
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR----------------------- 166
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
              +  +  T  Y  PE+I G       D+WS+G +  E   G   F+ H   E    + 
Sbjct: 167 ---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 283 RVLGPLP 289
           RV    P
Sbjct: 224 RVEFTFP 230

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 36/226 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAM-IEIEVLQQLAKHDKGGNRC 106
           +G+G F +  E  D + KE+ A K+V     +K +++  M  EI + + L          
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL-----DNPHV 104
Query: 107 VQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V    +F+  + + +V E     SL +  ++    + P    R   RQ ++ + ++H+  
Sbjct: 105 VGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQGVQYLHNNR 162
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IH DLK  N+ L     +K+ D+  +                     I+F     ER  
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATK-------------------IEFDG---ER-- 198
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +  +  T +Y APEV+   G ++  DIWS+GCIL  L  G+  F+T
Sbjct: 199 KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 40/260 (15%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEV-LQQLAKHDKGG 103
           I   +GEG+FG+V      + ++ VA+K +  + +KK      +E E+   +L +H    
Sbjct: 13  IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP--- 69
Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
              +++ +       I +V E  G  L+D++ +   +    D  R   +Q++  I + H 
Sbjct: 70  -HIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHR 126
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             ++H DLKPEN+LL  +  +K+ D+  S +   D ++ K             GS  Y  
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLK----------TSCGSPNYAA 175
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH--ENL-----E 276
           P+   +++ + Y  PEV          D+WS G +L  +  G   F      NL      
Sbjct: 176 PE---VINGKLYAGPEV----------DVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNS 222
Query: 277 HLAMMERVLGPLPQHMLKRV 296
            + +M   L P  Q +++R+
Sbjct: 223 CVYVMPDFLSPGAQSLIRRM 242

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 46/240 (19%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKGGNRCVQ 108
           K+G+G  G V    D    + VAI+ +   ++ ++  +I EI V+++        N+   
Sbjct: 28  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE--------NKNPN 79
Query: 109 IRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
           I N+ D     + + +V E L G SL D + +       I  V    R+ L+ + F+H  
Sbjct: 80  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSN 136
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---STTY 221
            +IH D+K +N+LL                               ++K+ DFG     T 
Sbjct: 137 QVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCAQITP 169
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
           E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L  L ++
Sbjct: 170 EQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 229

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 46/240 (19%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKGGNRCVQ 108
           K+G+G  G V    D    + VAI+ +   ++ ++  +I EI V+++        N+   
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE--------NKNPN 78
Query: 109 IRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
           I N+ D     + + +V E L G SL D + +       I  V    R+ L+ + F+H  
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSN 135
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---STTY 221
            +IH D+K +N+LL                               ++K+ DFG     T 
Sbjct: 136 QVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCAQITP 168
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
           E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L  L ++
Sbjct: 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 46/240 (19%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKGGNRCVQ 108
           K+G+G  G V    D    + VAI+ +   ++ ++  +I EI V+++        N+   
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE--------NKNPN 78
Query: 109 IRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
           I N+ D     + + +V E L G SL D + +       I  V    R+ L+ + F+H  
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSN 135
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---STTY 221
            +IH D+K +N+LL                               ++K+ DFG     T 
Sbjct: 136 QVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCAQITP 168
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
           E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L  L ++
Sbjct: 169 EQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 323
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 324 -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 381
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 382 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 429
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 430 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 478
Query: 283 R 283
           R
Sbjct: 479 R 479

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YIKV D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADF----------GFAKRVK----------GRTWX---- 197
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAM-IEIEVLQQLAKHDKGGNRC 106
           +G+G F +  E  D + KE+ A K+V     +K +++  M  EI + + L          
Sbjct: 34  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL-----DNPHV 88
Query: 107 VQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V    +F+  + + +V E     SL +  ++    + P    R   RQ ++ + ++H+  
Sbjct: 89  VGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQGVQYLHNNR 146
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IH DLK  N+ L     +K+ D+                    A K+       ++   
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDF------------------GLATKI------EFDGER 182
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +  +  T +Y APEV+   G ++  DIWS+GCIL  L  G+  F+T
Sbjct: 183 KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 228

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 46/240 (19%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKGGNRCVQ 108
           K+G+G  G V    D    + VAI+ +   ++ ++  +I EI V+++        N+   
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE--------NKNPN 78
Query: 109 IRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
           I N+ D     + + +V E L G SL D + +       I  V    R+ L+ + F+H  
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSN 135
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---STTY 221
            +IH D+K +N+LL                               ++K+ DFG     T 
Sbjct: 136 QVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCAQITP 168
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
           E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L  L ++
Sbjct: 169 EQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 240
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 241 -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 346
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 347 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
Query: 283 R 283
           R
Sbjct: 396 R 396

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 35/227 (15%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-EAAMIEIEVLQQLAKHDKGGN 104
           +I  ++G+G FG+V +  ++E   + A K++    +   E  ++EIE+L     H     
Sbjct: 14  EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILAT-CDH----P 68
Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
             V++   + +   + I+ E       D +     R      ++ + RQ+LE + F+H  
Sbjct: 69  YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +IH DLK  NVL+     I++ D+  S      +   K + K                 
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVS------AKNLKTLQK----------------- 165
Query: 225 DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 266
            ++  + T ++ APEV++        + Y  DIWS+G  L+E+   E
Sbjct: 166 -RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 211

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 44  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 98
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+    + P    R  A Q++    
Sbjct: 99  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP--HARFYAAQIVLTFE 155
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRT 195
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 196 WX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 240
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 241 -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 346
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 347 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
Query: 283 R 283
           R
Sbjct: 396 R 396

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 98/227 (43%), Gaps = 35/227 (15%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-EAAMIEIEVLQQLAKHDKGGN 104
           +I  ++G+G FG+V +  ++E   + A K++    +   E  ++EIE+L           
Sbjct: 22  EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-----DHP 76
Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
             V++   + +   + I+ E       D +     R      ++ + RQ+LE + F+H  
Sbjct: 77  YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +IH DLK  NVL+     I++ D+  S      +   K + K                 
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVS------AKNLKTLQK----------------- 173
Query: 225 DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 266
            ++  + T ++ APEV++        + Y  DIWS+G  L+E+   E
Sbjct: 174 -RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 44  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 98
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    
Sbjct: 99  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFE 155
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRT 195
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +  T  Y APE+IL  G+    D W++G ++ ++  G   F
Sbjct: 196 WX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 240
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 241 -LVQLYAVVS-EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 346
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 347 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
Query: 283 R 283
           R
Sbjct: 396 R 396

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 131/334 (39%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 16  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 74  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 129
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                       + 
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------SS 166
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
            R D   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 167 RRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 224 SRVEFTFPD------------FVTEGARD------------------------------- 240
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 241 ------LISRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 12  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 69
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 70  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 125
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 163
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               ++ +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 164 ----RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 220 SRVEFTFPD------------FVTEGARD------------------------------- 236
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 237 ------LISRLLKHNPSQRPMLREVLEHPWITAN 264

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 104/232 (44%), Gaps = 44/232 (18%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 65  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 119
Query: 101 KGGNRCVQIRNWFDYRNH--ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
              N    ++  F ++++  + +V E + G  ++  LR+     F     R  A Q++  
Sbjct: 120 ---NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVLT 174
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
             ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 214
Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 215 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 14  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 67
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 68  -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 125
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 126 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 173
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 174 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 222
Query: 283 R 283
           R
Sbjct: 223 R 223

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 54/257 (21%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G+G+FG+V               +VR + +     +  ++VL++     +   R    R
Sbjct: 36  LGQGSFGKVF--------------LVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMER 81
Query: 111 NWFDYRNHICIV-----FEKLGSSLY---DFLRKNNYRS-------FPIDLVREIARQLL 155
           +     NH  +V     F+  G  LY   DFLR  +  +       F  + V+    +L 
Sbjct: 82  DILADVNHPFVVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELA 140
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             +  +H L +I+ DLKPEN+LL    +IK+ D+  S                   + ID
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS------------------KEAID 182
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
                Y          T  Y APEV+   G ++  D WS G ++ E+ TG   FQ  +  
Sbjct: 183 HEKKAYS------FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRK 236
Query: 276 EHLAMMERVLGPLPQHM 292
           E + ++ +    +PQ +
Sbjct: 237 ETMTLILKAKLGMPQFL 253

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 44/241 (18%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           K+  K+G G FG+V +  +++  K  VA+K ++      EA + E  V++ L +HDK   
Sbjct: 185 KLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEANVMKTL-QHDK--- 238
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             V++      +  I I+ E +   SL DFL+ +     P+  + + + Q+ E +AF+  
Sbjct: 239 -LVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 296
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              IH DL+  N+L+ +S   K+ D+              R+     IK           
Sbjct: 297 RNYIHRDLRAANILVSASLVCKIADFG-----------LARVGAKFPIK----------- 334
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE I    +T   D+WS G +L+E+ T G   +    N E +  +E
Sbjct: 335 -----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 383
Query: 283 R 283
           R
Sbjct: 384 R 384

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 15  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++ 
Sbjct: 73  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSYC 128
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 129 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 166
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 167 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 222
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 223 SRVEFTFPD------------FVTEGARD------------------------------- 239
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 240 ------LISRLLKHNPSQRPMLREVLEHPWITAN 267

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 74
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 75  -LVQLYAVVS-EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 180
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 181 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 283 R 283
           R
Sbjct: 230 R 230

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 40/230 (17%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 39  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 93
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+     F     R  A Q++    
Sbjct: 94  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFE 150
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T
Sbjct: 151 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRT 190
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 191 WX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 128/335 (38%), Gaps = 81/335 (24%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEV-LQQLAKHDKGG 103
           ++  ++G+G F  V  C      +  A KI+   K   R+   +E E  + +L KH    
Sbjct: 7   QLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN-- 64
Query: 104 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
              V++ +         +VF+ + G  L++ +    Y S   D    I +Q+LE +   H
Sbjct: 65  --IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI-QQILESVNHCH 120
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              ++H DLKPEN+LL S                          K +A+K+ DFG     
Sbjct: 121 LNGIVHRDLKPENLLLASKS------------------------KGAAVKLADFGLAIEV 156
Query: 223 RPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           + DQ        T  Y +PEV+    +  P D+W+ G IL  L  G   F   +      
Sbjct: 157 QGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDED------ 210
Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
                     QH L        + ++ G  D+P               P    +  +  D
Sbjct: 211 ----------QHRLY-------QQIKAGAYDFPS--------------PEWDTVTPEAKD 239
Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                   L+  +L  +P  R+TA EAL+HP+  +
Sbjct: 240 --------LINKMLTINPAKRITASEALKHPWICQ 266

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 129/338 (38%), Gaps = 77/338 (22%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV-RGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           +GEG + +V      +  +  A+KI+ +     R     E+E L Q     +G    +++
Sbjct: 21  LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQC----QGNKNILEL 76
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
             +F+      +VFEKL G S+   ++K  +  F       + R +   + F+H   + H
Sbjct: 77  IEFFEDDTRFYLVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAALDFLHTKGIAH 134
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF--GS-------- 218
            DLKPEN+L  S E                        K S +K+ DF  GS        
Sbjct: 135 RDLKPENILCESPE------------------------KVSPVKICDFDLGSGMKLNNSC 170
Query: 219 TTYERPDQNYIVSTRHYRAPEVI-----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
           T    P+      +  Y APEV+         +   CD+WS+G +L  + +G   F  H 
Sbjct: 171 TPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHC 230
Query: 274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 333
             +         G     + +       + ++ G+ ++P+   +                
Sbjct: 231 GAD--------CGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWA---------------- 266
Query: 334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
              H+   A D   L+  LL  D   RL+A + L+HP+
Sbjct: 267 ---HISSEAKD---LISKLLVRDAKQRLSAAQVLQHPW 298

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 104
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 162
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+   +                
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVKGRTWT-------------- 198
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 199 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 93/229 (40%), Gaps = 49/229 (21%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG+V+     E     A+KI   + K +   + EIE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKEIE-------HTLNEKRILQAV 98
Query: 111 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
           N+         F   +++ +V E   G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H L +I+ DLKPEN+++    YIKV                            DFG   
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKV---------------------------TDFGLAK 189
Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
             +     +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 35  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 89
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 90  VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 147
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+   +                
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVKGRTWT-------------- 183
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 184 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G+G FGQV++  +       AIK +R  ++     + E+ +L  L       N    +R
Sbjct: 14  LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-------NHQYVVR 66
Query: 111 ---NWFDYRNHI---------CIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQL 154
               W + RN +           +F ++      +LYD +   N      +  R + RQ+
Sbjct: 67  YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR-LFRQI 125
Query: 155 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
           LE ++++H   +IH DLKP N+ +  S  +K+ D+  +          K + +S  I  +
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------KNVHRSLDILKL 175
Query: 215 DFGSTTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELC 263
           D  +      +    + T  Y A EV+ G G +    D++S+G I  E+ 
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 131/334 (39%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 12  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 69
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 70  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 125
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                       + 
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------SS 162
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
            R D   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 163 RRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 220 SRVEFTFPD------------FVTEGARD------------------------------- 236
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 237 ------LISRLLKHNPSQRPMLREVLEHPWITAN 264

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 11  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++ 
Sbjct: 69  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSYC 124
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 163 ----RTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 219 SRVEFTFPD------------FVTEGARD------------------------------- 235
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 236 ------LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 40/230 (17%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 44  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 98
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+     F     R  A Q++    
Sbjct: 99  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFE 155
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRT 195
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 196 WX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 14  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 72  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 127
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 165
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 166 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 222 SRVEFTFPD------------FVTEGARD------------------------------- 238
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 239 ------LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 131/334 (39%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 11  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 69  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 124
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                       + 
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------SS 161
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
            R D   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 162 RRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 219 SRVEFTFPD------------FVTEGARD------------------------------- 235
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 236 ------LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 128/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 16  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 74  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 129
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 167
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 168 ----RTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 224 SRVEFTFPD------------FVTEGARD------------------------------- 240
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 241 ------LISRLLKHNPSQRPXLREVLEHPWITAN 268

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 131/334 (39%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 11  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 69  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 124
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                       + 
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------SS 161
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
            R D   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 162 RRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 219 SRVEFTFPD------------FVTEGARD------------------------------- 235
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 236 ------LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 14  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++ 
Sbjct: 72  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSYC 127
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 165
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 166 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 222 SRVEFTFPD------------FVTEGARD------------------------------- 238
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 239 ------LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 40/230 (17%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 44  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 98
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+     F     R  A Q++    
Sbjct: 99  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFE 155
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRT 195
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 196 WX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 197
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 42  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 96
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+     F     R  A Q++    ++H L 
Sbjct: 97  VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLD 154
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 190
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 191 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 10  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 67
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++ 
Sbjct: 68  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSYC 123
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 124 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 161
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 162 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 217
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 218 SRVEFTFPD------------FVTEGARD------------------------------- 234
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 235 ------LISRLLKHNPSQRPMLREVLEHPWITAN 262

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 16  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 74  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 129
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 167
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 168 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 224 SRVEFTFPD------------FVTEGARD------------------------------- 240
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 241 ------LISRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 104
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 162
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 198
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 199 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 11  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 69  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 124
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 163 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 219 SRVEFTFPD------------FVTEGARD------------------------------- 235
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 236 ------LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 197
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 44  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 98
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    
Sbjct: 99  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFE 155
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+++    YI+V D+           + KR+           G T
Sbjct: 156 YLHSLDLIYRDLKPENLIIDQQGYIQVTDF----------GFAKRVK----------GRT 195
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +  T  Y APE+I+  G+    D W++G ++ E+  G   F
Sbjct: 196 WX-------LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 128/335 (38%), Gaps = 81/335 (24%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEV-LQQLAKHDKGG 103
           ++  ++G+G F  V  C      +  A KI+   K   R+   +E E  + +L KH    
Sbjct: 7   QLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN-- 64
Query: 104 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
              V++ +         +VF+ + G  L++ +    Y S   D    I +Q+LE +   H
Sbjct: 65  --IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI-QQILESVNHCH 120
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              ++H DLKPEN+LL S                          K +A+K+ DFG     
Sbjct: 121 LNGIVHRDLKPENLLLASKS------------------------KGAAVKLADFGLAIEV 156
Query: 223 RPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           + DQ        T  Y +PEV+    +  P D+W+ G IL  L  G   F   +      
Sbjct: 157 QGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDED------ 210
Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
                     QH L        + ++ G  D+P               P    +  +  D
Sbjct: 211 ----------QHRLY-------QQIKAGAYDFPS--------------PEWDTVTPEAKD 239
Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                   L+  +L  +P  R+TA EAL+HP+  +
Sbjct: 240 --------LINKMLTINPAKRITASEALKHPWICQ 266

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 197
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 107/265 (40%), Gaps = 38/265 (14%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           I   +G G FG V  C +   K+    K V+     +     EI +L  +A+H       
Sbjct: 9   IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILN-IARH----RNI 63
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR---QLLECIAFMHD 163
           + +   F+    + ++FE +  S  D   + N  +F ++  REI     Q+ E + F+H 
Sbjct: 64  LHLHESFESMEELVMIFEFI--SGLDIFERINTSAFELN-EREIVSYVHQVCEALQFLHS 120
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             + H D++PEN++                          +  +SS IK+I+FG     +
Sbjct: 121 HNIGHFDIRPENIIY-------------------------QTRRSSTIKIIEFGQARQLK 155
Query: 224 PDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
           P  N+  + +   Y APEV      +   D+WS+G ++  L +G   F    N + +  +
Sbjct: 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI 215
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRR 306
                   +   K +   A  +V R
Sbjct: 216 MNAEYTFDEEAFKEISIEAMDFVDR 240

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 197
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 40/230 (17%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 44  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 98
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+     F     R  A Q++    
Sbjct: 99  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFE 155
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRT 195
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 196 WX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 131/334 (39%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 14  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++ 
Sbjct: 72  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSYC 127
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 165
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               ++ +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 166 ----RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 222 SRVEFTFPD------------FVTEGARD------------------------------- 238
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 239 ------LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 11  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++ 
Sbjct: 69  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSYC 124
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 163 ----RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 219 SRVEFTFPD------------FVTEGARD------------------------------- 235
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 236 ------LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 39/249 (15%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKG 102
           +H  +G+G+FG+V     ++  +  AIK ++     +    E  M+E  VL    +H   
Sbjct: 21  LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP-- 78
Query: 103 GNRCVQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                 +   F  + ++  V E L  G  +Y      +   F +      A +++  + F
Sbjct: 79  --FLTHMFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAAEIILGLQF 133
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   +++ DLK +N+LL    +IK+ D+               M K + +     G   
Sbjct: 134 LHSKGIVYRDLKLDNILLDKDGHIKIADFG--------------MCKENML-----GDAK 174
Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 278
                 N    T  Y APE++LG  + +  D WS G +L E+  G++ F  Q  E L H 
Sbjct: 175 -----TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS 229
Query: 279 AMMERVLGP 287
             M+    P
Sbjct: 230 IRMDNPFYP 238

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 120/289 (41%), Gaps = 49/289 (16%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++   +G G FG V  C  + R + VAIK +   +  R+A ++E+  L ++       N 
Sbjct: 11  EVEEVVGRGAFGVV--CKAKWRAKDVAIKQIES-ESERKAFIVELRQLSRV-------NH 60
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC---IAFM 161
              ++ +    N +C+V E   G SLY+ L  +     P           L+C   +A++
Sbjct: 61  PNIVKLYGACLNPVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 162 HDL---CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
           H +    +IH DLKP N+LLV+                            + +K+ DFG+
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAG--------------------------GTVLKICDFGT 152
Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
               +        +  + APEV  G  ++  CD++S G IL E+ T    F         
Sbjct: 153 ACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR 212
Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 327
            M     G  P  ++K + +  E  + R    W +  + R S++ ++K+
Sbjct: 213 IMWAVHNGTRPP-LIKNLPKPIESLMTRC---WSKDPSQRPSMEEIVKI 257

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 13  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 70
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 71  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 126
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 164
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 165 ----RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 221 SRVEFTFPD------------FVTEGARD------------------------------- 237
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 238 ------LISRLLKHNPSQRPMLREVLEHPWITAN 265

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 40/230 (17%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 44  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 98
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    
Sbjct: 99  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFE 155
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRT 195
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +  T  Y AP +IL  G+    D W++G ++ E+  G   F
Sbjct: 196 WX-------LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 14  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++ 
Sbjct: 72  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSYC 127
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 165
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 166 ----RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 222 SRVEFTFPD------------FVTEGARD------------------------------- 238
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 239 ------LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 74
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 75  -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 180
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 181 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 283 R 283
           R
Sbjct: 230 R 230

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 11  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 69  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 124
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 163 ----RTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 219 SRVEFTFPD------------FVTEGARD------------------------------- 235
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 236 ------LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G+G FGQV++  +       AIK +R  ++     + E+ +L  L       N    +R
Sbjct: 14  LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-------NHQYVVR 66
Query: 111 ---NWFDYRNHI---------CIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQL 154
               W + RN +           +F ++      +LYD +   N      +  R + RQ+
Sbjct: 67  YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR-LFRQI 125
Query: 155 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
           LE ++++H   +IH DLKP N+ +  S  +K+ D+  +          K + +S  I  +
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------KNVHRSLDILKL 175
Query: 215 DFGSTTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELC 263
           D  +      +    + T  Y A EV+ G G +    D++S+G I  E+ 
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 188 RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGNMSPEAFLQEAQVMKKL-RHEK--- 241
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 242 -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 299
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+       +D+ Y  R      IK           
Sbjct: 300 MNYVHRDLRAANILVGENLVCKVADFGLG-RLIEDNEYTARQGAKFPIK----------- 347
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 348 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 396
Query: 283 R 283
           R
Sbjct: 397 R 397

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 14  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 72  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 127
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 165
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 166 ----RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 222 SRVEFTFPD------------FVTEGARD------------------------------- 238
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 239 ------LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E   G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+++    YIKV D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------GRTWX---- 197
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 49/229 (21%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG+V+     E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 99
Query: 111 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
           N+         F   +++ +V E   G  ++  LR+    S P    R  A Q++    +
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 157
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H L +I+ DLKPEN+++    YIKV D+           + KR+           G T 
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------GRTW 197
Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                   +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 131/334 (39%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 37  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 94
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 95  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 150
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                       + 
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------SS 187
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
            R D   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 188 RRDD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 244
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 245 SRVEFTFPD------------FVTEGARD------------------------------- 261
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 262 ------LISRLLKHNPSQRPMLREVLEHPWITAN 289

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 12  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 65
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 66  -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 123
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 124 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 171
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 172 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 220
Query: 283 R 283
           R
Sbjct: 221 R 221

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 28  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 85
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 86  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 141
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 142 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 179
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 180 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 235
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 236 SRVEFTFPD------------FVTEGARD------------------------------- 252
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 253 ------LISRLLKHNPSQRPMLREVLEHPWITAN 280

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 11  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++ 
Sbjct: 69  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSYC 124
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 163 ----RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 219 SRVEFTFPD------------FVTEGARD------------------------------- 235
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 236 ------LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 49/229 (21%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG+V+     E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 99
Query: 111 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
           N+         F   +++ +V E   G  ++  LR+    S P    R  A Q++    +
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 157
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H L +I+ DLKPEN+++    YIKV D+           + KR+           G T 
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------GRTW 197
Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                   +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 120/289 (41%), Gaps = 49/289 (16%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++   +G G FG V  C  + R + VAIK +   +  R+A ++E+  L ++       N 
Sbjct: 12  EVEEVVGRGAFGVV--CKAKWRAKDVAIKQIES-ESERKAFIVELRQLSRV-------NH 61
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC---IAFM 161
              ++ +    N +C+V E   G SLY+ L  +     P           L+C   +A++
Sbjct: 62  PNIVKLYGACLNPVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 162 HDL---CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
           H +    +IH DLKP N+LLV+                            + +K+ DFG+
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAG--------------------------GTVLKICDFGT 153
Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
               +        +  + APEV  G  ++  CD++S G IL E+ T    F         
Sbjct: 154 ACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR 213
Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 327
            M     G  P  ++K + +  E  + R    W +  + R S++ ++K+
Sbjct: 214 IMWAVHNGTRPP-LIKNLPKPIESLMTRC---WSKDPSQRPSMEEIVKI 258

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 10  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 63
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 64  -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 121
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 122 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 169
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 170 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 218
Query: 283 R 283
           R
Sbjct: 219 R 219

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 104/250 (41%), Gaps = 39/250 (15%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDK 101
           ++H  +G+G+FG+V     ++  +  AIK ++     +    E  M+E  VL    +H  
Sbjct: 21  ELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP- 79
Query: 102 GGNRCVQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                  +   F  + ++  V E L  G  +Y      +   F +      A +++  + 
Sbjct: 80  ---FLTHMFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAAEIILGLQ 133
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           F+H   +++ DLK +N+LL    +IK+ D+               M K + +     G  
Sbjct: 134 FLHSKGIVYRDLKLDNILLDKDGHIKIADFG--------------MCKENML-----GDA 174
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEH 277
                  N    T  Y APE++LG  + +  D WS G +L E+  G++ F  Q  E L H
Sbjct: 175 K-----TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 229
Query: 278 LAMMERVLGP 287
              M+    P
Sbjct: 230 SIRMDNPFYP 239

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/293 (20%), Positives = 126/293 (43%), Gaps = 43/293 (14%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI- 109
           +G GT+GQV +    +  ++ AIK++       E    EI +L++ + H           
Sbjct: 32  VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 110 -RNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
            +N     + + +V E  G+ S+ D ++     +   + +  I R++L  ++ +H   +I
Sbjct: 92  KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVI 151
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERP-- 224
           H D+K +NVLL                            +++ +K++DFG S   +R   
Sbjct: 152 HRDIKGQNVLLT---------------------------ENAEVKLVDFGVSAQLDRTVG 184
Query: 225 DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
            +N  + T ++ APEVI         + +  D+WS+G   +E+  G         +  L 
Sbjct: 185 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF 244
Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
           ++ R   P P+   K+  +  + ++    +   +  + R + + +MK P +++
Sbjct: 245 LIPR--NPAPRLKSKKWSKKFQSFIESCLV---KNHSQRPATEQLMKHPFIRD 292

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 18  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 71
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + +++ Q+   +A++  
Sbjct: 72  -LVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 130 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 177
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 178 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 226
Query: 283 R 283
           R
Sbjct: 227 R 227

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 37  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 94
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 95  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 150
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 188
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 189 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 244
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 245 SRVEFTFPD------------FVTEGARD------------------------------- 261
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 262 ------LISRLLKHNPSQRPMLREVLEHPWITAN 289

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 74
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 75  -LVQLYAVVS-EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 180
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 181 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 283 R 283
           R
Sbjct: 230 R 230

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 128/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 12  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 69
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 70  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 125
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S H P                         
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---------------------- 163
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 164 ----RTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 220 SRVEFTFPD------------FVTEGARD------------------------------- 236
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 237 ------LISRLLKHNPSQRPMLREVLEHPWITAN 264

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 46/240 (19%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKGGNRCVQ 108
           K+G+G  G V    D    + VAI+ +   ++ ++  +I EI V+++        N+   
Sbjct: 28  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE--------NKNPN 79
Query: 109 IRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
           I N+ D     + + +V E L G SL D + +       I  V    R+ L+ + F+H  
Sbjct: 80  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSN 136
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---STTY 221
            +IH ++K +N+LL                               ++K+ DFG     T 
Sbjct: 137 QVIHRNIKSDNILL---------------------------GMDGSVKLTDFGFCAQITP 169
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
           E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L  L ++
Sbjct: 170 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 229

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/333 (20%), Positives = 126/333 (37%), Gaps = 83/333 (24%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 16  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 104 NRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
           N  +++  +F     + ++ E      +Y  L+K     F          +L   +++ H
Sbjct: 74  N-ILRLYGYFHDATRVYLILEYAPRGEVYKELQK--LSKFDEQRTATYITELANALSYCH 130
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH D+KPEN+LL S+  +K+ D+  S+H P                          
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----------------------- 167
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
              +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    + 
Sbjct: 168 ---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
           RV    P             +V  G  D                                
Sbjct: 225 RVEFTFPD------------FVTEGARD-------------------------------- 240
Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                L+  LL+++P+ R   RE L HP+ T +
Sbjct: 241 -----LISRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 11  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 64
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 65  LVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 123
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH DL+  N+L+  +   K+ D+  +    +D+ Y  R      IK            
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIK------------ 170
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 283
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 171 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 220
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 326
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 221 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 74
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 75  -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL   N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 133 MNYVHRDLAAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 180
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 181 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 283 R 283
           R
Sbjct: 230 R 230

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----C 106
           +G+GTFG+V+   ++      A+KI+R     +E  + + EV   + +     N      
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILR-----KEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++  F   + +C V E   G  L+  L +   R F  +  R    +++  + ++H   
Sbjct: 68  TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 125
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ D+K EN++L    +IK+ D+        D +  K                      
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--------------------- 164
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 283
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 165 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 221
Query: 284 VLGP 287
           +  P
Sbjct: 222 IRFP 225

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----C 106
           +G+GTFG+V+   ++      A+KI+R     +E  + + EV   + +     N      
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILR-----KEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++  F   + +C V E   G  L+  L +   R F  +  R    +++  + ++H   
Sbjct: 68  TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 125
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ D+K EN++L    +IK+ D+        D +  K                      
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--------------------- 164
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 283
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 165 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 221
Query: 284 VLGP 287
           +  P
Sbjct: 222 IRFP 225

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----C 106
           +G+GTFG+V+   ++      A+KI+R     +E  + + EV   + +     N      
Sbjct: 16  LGKGTFGKVILVREKATGRYYAMKILR-----KEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++  F   + +C V E   G  L+  L +   R F  +  R    +++  + ++H   
Sbjct: 71  TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 128
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ D+K EN++L    +IK+ D+        D +  K                      
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--------------------- 167
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 283
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 168 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 224
Query: 284 VLGP 287
           +  P
Sbjct: 225 IRFP 228

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----C 106
           +G+GTFG+V+   ++      A+KI+R     +E  + + EV   + +     N      
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILR-----KEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++  F   + +C V E   G  L+  L +   R F  +  R    +++  + ++H   
Sbjct: 68  TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 125
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ D+K EN++L    +IK+ D+        D +  K                      
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--------------------- 164
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 283
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 165 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 221
Query: 284 VLGP 287
           +  P
Sbjct: 222 IRFP 225

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/333 (20%), Positives = 126/333 (37%), Gaps = 83/333 (24%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 16  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 104 NRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
           N  +++  +F     + ++ E      +Y  L+K     F          +L   +++ H
Sbjct: 74  N-ILRLYGYFHDATRVYLILEYAPRGEVYKELQK--LSKFDEQRTATYITELANALSYCH 130
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH D+KPEN+LL S+  +K+ D+  S+H P                          
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----------------------- 167
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
              +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    + 
Sbjct: 168 ---RXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
           RV    P             +V  G  D                                
Sbjct: 225 RVEFTFPD------------FVTEGARD-------------------------------- 240
Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                L+  LL+++P+ R   RE L HP+ T +
Sbjct: 241 -----LISRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 93/229 (40%), Gaps = 49/229 (21%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG+V+     E     A+KI   + K +   + EIE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKEIE-------HTLNEKRILQAV 98
Query: 111 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
           N+         F   +++ +V E   G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H L +I+ DLKPEN+++    YI+V                            DFG   
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQV---------------------------TDFGLAK 189
Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
             +     +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----C 106
           +G+GTFG+V+   ++      A+KI+R     +E  + + EV   + +     N      
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILR-----KEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++  F   + +C V E   G  L+  L +   R F  +  R    +++  + ++H   
Sbjct: 68  TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 125
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ D+K EN++L    +IK+ D+        D +  K                      
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--------------------- 164
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 283
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 165 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 221
Query: 284 VLGP 287
           +  P
Sbjct: 222 IRFP 225

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 51/235 (21%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +I   +G G+FG+V     R      A+K+++           EI V  +  +H      
Sbjct: 9   QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKK----------EIVVRLKQVEHTNDERL 58
Query: 106 CVQI-------RNWFDYRN--HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLL 155
            + I       R W  +++   I ++ + + G  L+  LRK+  + FP  + +  A ++ 
Sbjct: 59  MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVC 116
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H   +I+ DLKPEN+LL                            K+  IK+ D
Sbjct: 117 LALEYLHSKDIIYRDLKPENILL---------------------------DKNGHIKITD 149
Query: 216 FGSTTYERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
           FG   Y  PD  Y +  T  Y APEV+    +    D WS G ++ E+  G   F
Sbjct: 150 FGFAKY-VPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V++++ +H+K   
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKI-RHEK--- 74
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 75  -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 180
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 181 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 283 R 283
           R
Sbjct: 230 R 230

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/334 (20%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 14  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 72  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 127
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ ++  S+H P                         
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---------------------- 165
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 166 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 222 SRVEFTFPD------------FVTEGARD------------------------------- 238
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 239 ------LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----C 106
           +G+GTFG+V+   ++      A+KI+R     +E  + + EV   + +     N      
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILR-----KEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++  F   + +C V E   G  L+  L +   R F  +  R    +++  + ++H   
Sbjct: 68  TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 125
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ D+K EN++L    +IK+ D+        D +  K                      
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--------------------- 164
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 283
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 165 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 221
Query: 284 VLGP 287
           +  P
Sbjct: 222 IRFP 225

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 128/327 (39%), Gaps = 97/327 (29%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI- 109
           +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A       R V + 
Sbjct: 26  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHIVRIVDVY 80
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
            N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++H + + H
Sbjct: 81  ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---STTYERPD 225
            D+KPEN+L  S    K P+                    + +K+ DFG    TT E+ D
Sbjct: 141 RDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTGEKYD 176
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           ++                      CD+WS+G I+  L  G   F ++  L          
Sbjct: 177 KS----------------------CDMWSLGVIMYILLCGYPPFYSNHGLA--------- 205
Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                     +    +  +R G+ ++P    S  S +  M                    
Sbjct: 206 ----------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM-------------------- 235
Query: 346 THLLQGLLRYDPTDRLTAREALRHPFF 372
             L++ LL+ +PT R+T  E + HP+ 
Sbjct: 236 --LIRNLLKTEPTQRMTITEFMNHPWI 260

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 40/230 (17%)
Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHD 100
           D+I + +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +    
Sbjct: 44  DRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 98
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    
Sbjct: 99  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFE 155
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRT 195
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                    +  T    APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 196 WX-------LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 74
Query: 105 RCVQIRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +    L DFL+    +   +  + ++A Q+   +A++  
Sbjct: 75  -LVQLYAVVS-EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 180
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 181 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 283 R 283
           R
Sbjct: 230 R 230

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E   G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+++    YI+V D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 197
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----C 106
           +G+GTFG+V+   ++      A+KI+R     +E  + + EV   + +     N      
Sbjct: 18  LGKGTFGKVILVREKATGRYYAMKILR-----KEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++  F   + +C V E   G  L+  L +   R F  +  R    +++  + ++H   
Sbjct: 73  TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 130
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ D+K EN++L    +IK+ D+        D +  K                      
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--------------------- 169
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 283
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 170 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 226
Query: 284 VLGP 287
           +  P
Sbjct: 227 IRFP 230

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+     F     R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 197
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+     F     R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 197
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 104
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E + G  ++  LR+     F     R  A Q++    ++H L 
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYLHSLD 162
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 198
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 199 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 69
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 70  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH DL+  N+L+  +   K+ D+  +    +D+ Y  R      IK            
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIK------------ 175
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 283
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 326
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 226 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 77/334 (23%), Positives = 131/334 (39%), Gaps = 81/334 (24%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEV-LQQLAKHDKGG 103
           ++  ++G+G F  V  C      +  A  I+   K   R+   +E E  + +L KH    
Sbjct: 14  QLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPN-- 71
Query: 104 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
              V++ +      H  ++F+ + G  L++ +    Y S   D    I +Q+LE +   H
Sbjct: 72  --IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-EADASHCI-QQILEAVLHCH 127
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTY 221
            + ++H +LKPEN+LL S                          K +A+K+ DFG +   
Sbjct: 128 QMGVVHRNLKPENLLLASK------------------------LKGAAVKLADFGLAIEV 163
Query: 222 ERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           E   Q +     T  Y +PEV+    +  P D+W+ G IL  L  G   F   +      
Sbjct: 164 EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED------ 217
Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
                     QH L        + ++ G  D+P               P    +  +  D
Sbjct: 218 ----------QHRLY-------QQIKAGAYDFPS--------------PEWDTVTPEAKD 246
Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                   L+  +L  +P+ R+TA EAL+HP+ +
Sbjct: 247 --------LINKMLTINPSKRITAAEALKHPWIS 272

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/334 (20%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 13  EIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 70
Query: 104 NRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++ 
Sbjct: 71  N-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 126
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ ++  S+H P                         
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---------------------- 164
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 165 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 221 SRVEFTFPD------------FVTEGARD------------------------------- 237
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 238 ------LISRLLKHNPSQRPMLREVLEHPWITAN 265

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V++   F   +++ +V E   G  ++  LR+     F     R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLKPEN+++    YIKV D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------GRTWX---- 197
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
              +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 70/334 (20%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKGG 103
           +I   +G+G FG V    ++  K ++A+K++   K   E A +E ++ ++  +  H +  
Sbjct: 11  EIGRPLGKGKFGNVYLAREKNSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 104 NRCVQIRNWF--DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           N  +++  +F    R ++ + +  LG+ +Y  L+K     F          +L   +++ 
Sbjct: 69  N-ILRLYGYFHDSTRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSYC 124
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 125 HSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   +    +
Sbjct: 163 ----RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRI 218
Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            RV    P             +V  G  D                               
Sbjct: 219 SRVEFTFPD------------FVTEGARD------------------------------- 235
Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 236 ------LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 22  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 75
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 76  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH DL+  N+L+  +   K+ D+  +    +D+ Y  R      IK            
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIK------------ 181
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 283
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 182 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 326
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 232 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 21  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 74
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 75  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 133
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH DL+  N+L+  +   K+ D+  +    +D+ Y  R      IK            
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIK------------ 180
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 283
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 181 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 230
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 326
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 231 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 49/229 (21%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G+FG+V+     E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 99
Query: 111 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
           N+         F   +++ +V E   G  ++  LR+     F     R  A Q++    +
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEY 157
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H L +I+ DLKPEN+++    YIKV D+           + KR+           G T 
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------GRTW 197
Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                   +  T  Y APE+IL  G+    D W++G ++ E+  G   F
Sbjct: 198 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 26  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 79
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 80  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 138
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH DL+  N+L+  +   K+ D+  +    +D+ Y  R      IK            
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIK------------ 185
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 283
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 186 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 235
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 326
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 236 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 275

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 187
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +   N  V T  Y +PE++         D+W++GCI+ +L  G   F+ 
Sbjct: 188 QARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRA 236

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 74
Query: 105 RCVQIRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +    L DFL+    +   +  + ++A Q+   +A++  
Sbjct: 75  -LVQLYAVVS-EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 180
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 181 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 283 R 283
           R
Sbjct: 230 R 230

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 11  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 64
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 65  -LVQLYAVVS-EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 122
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+    R      IK           
Sbjct: 123 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEXTARQGAKFPIK----------- 170
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 171 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 219
Query: 283 R 283
           R
Sbjct: 220 R 220

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGC-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 187
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +   N  V T  Y +PE++     +   D+W++GCI+ +L  G   F+ 
Sbjct: 188 QARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRA 236

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 18  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 71
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + +++ Q+   +A++  
Sbjct: 72  -LVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+ +  R      IK           
Sbjct: 130 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEWTARQGAKFPIK----------- 177
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 178 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 226
Query: 283 R 283
           R
Sbjct: 227 R 227

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 12  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 65
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 66  LVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 124
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH +L+  N+L+  +   K+ D+  +    +D+ Y  R      IK            
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIK------------ 171
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 283
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 172 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 221
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 326
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 222 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 133/337 (39%), Gaps = 79/337 (23%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRC---- 106
           +G G    V   +   +KE VAIK +  ++K + +       + +L K  +  ++C    
Sbjct: 18  IGSGATAVVQAAYCAPKKEKVAIKRIN-LEKCQTS-------MDELLKEIQAMSQCHHPN 69
Query: 107 -VQIRNWFDYRNHICIVFEKL-GSSLYDFLR----KNNYRSFPID--LVREIARQLLECI 158
            V     F  ++ + +V + L G S+ D ++    K  ++S  +D   +  I R++LE +
Sbjct: 70  IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            ++H    IH D+K  N+LL     +++ D+  S                    +   G 
Sbjct: 130 EYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF------------------LATGGD 171
Query: 219 TTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
            T  +  + + V T  + APEV+  + G+ +  DIWS G   +EL TG A +  +  ++ 
Sbjct: 172 ITRNKVRKTF-VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV 230
Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 337
           L +  +   P                          G   +E +K   K  R        
Sbjct: 231 LMLTLQNDPP----------------------SLETGVQDKEMLKKYGKSFR-------- 260
Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                     ++   L+ DP  R TA E LRH FF +
Sbjct: 261 ---------KMISLCLQKDPEKRPTAAELLRHKFFQK 288

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 46  KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 74
Query: 105 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 75  -LVQLYAVVS-EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL+  N+L+  +   KV D+  +    +D+    R      IK           
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEXTARQGAKFPIK----------- 180
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 282
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 181 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 283 R 283
           R
Sbjct: 230 R 230

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 43  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 95
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 96  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 152
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 190
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +   N  V T  Y +PE++         D+W++GCI+ +L  G   F+ 
Sbjct: 191 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 239

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 187
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +   N  V T  Y +PE++         D+W++GCI+ +L  G   F+ 
Sbjct: 188 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 187
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +   N  V T  Y +PE++         D+W++GCI+ +L  G   F+ 
Sbjct: 188 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 133/337 (39%), Gaps = 79/337 (23%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRC---- 106
           +G G    V   +   +KE VAIK +  ++K + +       + +L K  +  ++C    
Sbjct: 23  IGSGATAVVQAAYCAPKKEKVAIKRIN-LEKCQTS-------MDELLKEIQAMSQCHHPN 74
Query: 107 -VQIRNWFDYRNHICIVFEKL-GSSLYDFLR----KNNYRSFPID--LVREIARQLLECI 158
            V     F  ++ + +V + L G S+ D ++    K  ++S  +D   +  I R++LE +
Sbjct: 75  IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            ++H    IH D+K  N+LL     +++ D+  S                    +   G 
Sbjct: 135 EYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF------------------LATGGD 176
Query: 219 TTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
            T  +  + + V T  + APEV+  + G+ +  DIWS G   +EL TG A +  +  ++ 
Sbjct: 177 ITRNKVRKTF-VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV 235
Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 337
           L +  +   P                          G   +E +K   K  R        
Sbjct: 236 LMLTLQNDPP----------------------SLETGVQDKEMLKKYGKSFR-------- 265
Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                     ++   L+ DP  R TA E LRH FF +
Sbjct: 266 ---------KMISLCLQKDPEKRPTAAELLRHKFFQK 293

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 187
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +   N  V T  Y +PE++         D+W++GCI+ +L  G   F+ 
Sbjct: 188 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 187
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +   N  V T  Y +PE++         D+W++GCI+ +L  G   F+ 
Sbjct: 188 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 41  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 93
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 94  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 150
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 188
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +   N  V T  Y +PE++         D+W++GCI+ +L  G   F+ 
Sbjct: 189 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 90
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 185
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +   N  V T  Y +PE++         D+W++GCI+ +L  G   F+ 
Sbjct: 186 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 90
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 185
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +   N  V T  Y +PE++         D+W++GCI+ +L  G   F+ 
Sbjct: 186 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 35/231 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAA--MIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+VL    +  +   A+K++  + I K +E    M E  VL +  KH       
Sbjct: 46  IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP----FL 101
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V +   F   + +  V + + G  L+  L++   R F     R  A ++   + ++H L 
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLN 159
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +++ DLKPEN+LL S  +I + D+                      + I+  STT     
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDF------------------GLCKENIEHNSTT----- 196
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
            +    T  Y APEV+    +    D W +G +L E+  G   F +    E
Sbjct: 197 -STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 246

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 90
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 185
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +   N  V T  Y +PE++         D+W++GCI+ +L  G   F+ 
Sbjct: 186 QARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 30/231 (12%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           I   +G+G FG V    +++ K ++A+K++   +  +E    ++    ++  H +  N  
Sbjct: 19  IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN-I 77
Query: 107 VQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           +++ N+F  R  I ++ E      LY  L+K+    F          +L + + + H+  
Sbjct: 78  LRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERK 135
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IH D+KPEN+L+     +K+ D+  S+H P   S  +R                     
Sbjct: 136 VIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRX-------------------- 172
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
              +  T  Y  PE+I G       D+W  G +  E   G   F +  + E
Sbjct: 173 ---MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 220

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 41  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 93
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 94  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 150
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 188
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +   N  V T  Y +PE++         D+W++GCI+ +L  G   F+ 
Sbjct: 189 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/348 (20%), Positives = 132/348 (37%), Gaps = 107/348 (30%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAAMIEIEVLQQLAKH 99
           I  ++G G   +V +  + E+K++ AIK V       + +  YR     EI  L +L +H
Sbjct: 32  ILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQH 86
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
               ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE + 
Sbjct: 87  ---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVH 141
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +H   ++H+DLKP N L+V                               +K+IDFG  
Sbjct: 142 TIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIA 173
Query: 220 TYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELC 263
              +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 174 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 233
Query: 264 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 323
            G+  FQ  + +  ++ +  ++ P                     +++P           
Sbjct: 234 YGKTPFQ--QIINQISKLHAIIDP------------------NHEIEFP----------- 262
Query: 324 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                          D    DL  +L+  L+ DP  R++  E L HP+
Sbjct: 263 ---------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 40/223 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 37  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 89
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 90  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 146
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 184
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
           +   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 185 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 40/223 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 22  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 74
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 75  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 131
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 169
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
           +   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 170 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/348 (20%), Positives = 132/348 (37%), Gaps = 107/348 (30%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAAMIEIEVLQQLAKH 99
           I  ++G G   +V +  + E+K++ AIK V       + +  YR     EI  L +L +H
Sbjct: 13  ILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQH 67
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
               ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE + 
Sbjct: 68  ---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVH 122
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +H   ++H+DLKP N L+V                               +K+IDFG  
Sbjct: 123 TIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIA 154
Query: 220 TYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELC 263
              +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 155 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 214
Query: 264 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 323
            G+  FQ  + +  ++ +  ++ P                     +++P           
Sbjct: 215 YGKTPFQ--QIINQISKLHAIIDP------------------NHEIEFP----------- 243
Query: 324 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                          D    DL  +L+  L+ DP  R++  E L HP+
Sbjct: 244 ---------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 123/298 (41%), Gaps = 71/298 (23%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAAMIEIEVLQQLAKH 99
           I  ++G G   +V +  + E+K++ AIK V       + +  YR     EI  L +L +H
Sbjct: 60  ILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQH 114
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
               ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE + 
Sbjct: 115 ---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVH 169
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +H   ++H+DLKP N L+V                               +K+IDFG  
Sbjct: 170 TIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIA 201
Query: 220 TYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELC 263
              +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 202 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261
Query: 264 TGEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 313
            G+  FQ  + +  ++ +  ++ P        +P+  L+ V +   K   + R+  PE
Sbjct: 262 YGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 34/221 (15%)
Query: 51  MGEGTFGQV-LECWDRERK---EMVAIKIVRGI--KKYREAAMIEIEVLQQLA-KHDKGG 103
           +GEG FG+V L C+D       EMVA+K ++     ++R     EI++L+ L  +H    
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             C + +   +    + + +  LGS L D+L ++   S  +  +   A+Q+ E +A++H 
Sbjct: 82  KGCCEDQG--EKSLQLVMEYVPLGS-LRDYLPRH---SIGLAQLLLFAQQICEGMAYLHS 135
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              IH +L   NVLL +   +K+ D+  +   P+   Y++                   R
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV------------------R 177
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
            D +   S   + APE +    + Y  D+WS G  L EL T
Sbjct: 178 EDGD---SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 96/227 (42%), Gaps = 30/227 (13%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G+G FG V    +++ K ++A+K++   +  +E    ++    ++  H +  N  +++ 
Sbjct: 22  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN-ILRMY 80
Query: 111 NWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHT 169
           N+F  R  I ++ E      LY  L+K+    F          +L + + + H+  +IH 
Sbjct: 81  NYFHDRKRIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERKVIHR 138
Query: 170 DLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI 229
           D+KPEN+L+     +K+ D+  S+H P   S  +R                        +
Sbjct: 139 DIKPENLLMGYKGELKIADFGWSVHAP---SLRRRX-----------------------M 172
Query: 230 VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
             T  Y  PE+I G       D+W  G +  E   G   F +  + E
Sbjct: 173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 40/223 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 37  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 89
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 90  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 146
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 184
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
           +   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 185 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 15  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 67
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 68  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 124
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 162
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +   N  V T  Y +PE++         D+W++GCI+ +L  G   F+ 
Sbjct: 163 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 211

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 17  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 69
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 70  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 126
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 164
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +   N  V T  Y +PE++         D+W++GCI+ +L  G   F+ 
Sbjct: 165 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 213

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 18  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 70
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 71  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 127
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 165
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +   N  V T  Y +PE++         D+W++GCI+ +L  G   F+ 
Sbjct: 166 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 214

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/348 (20%), Positives = 132/348 (37%), Gaps = 107/348 (30%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAAMIEIEVLQQLAKH 99
           I  ++G G   +V +  + E+K++ AIK V       + +  YR     EI  L +L +H
Sbjct: 16  ILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQH 70
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
               ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE + 
Sbjct: 71  ---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVH 125
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +H   ++H+DLKP N L+V                               +K+IDFG  
Sbjct: 126 TIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIA 157
Query: 220 TYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELC 263
              +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 158 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 217
Query: 264 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 323
            G+  FQ  + +  ++ +  ++ P                     +++P           
Sbjct: 218 YGKTPFQ--QIINQISKLHAIIDP------------------NHEIEFP----------- 246
Query: 324 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                          D    DL  +L+  L+ DP  R++  E L HP+
Sbjct: 247 ---------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 279

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/348 (20%), Positives = 132/348 (37%), Gaps = 107/348 (30%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAAMIEIEVLQQLAKH 99
           I  ++G G   +V +  + E+K++ AIK V       + +  YR     EI  L +L +H
Sbjct: 32  ILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQH 86
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
               ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE + 
Sbjct: 87  ---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVH 141
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +H   ++H+DLKP N L+V                               +K+IDFG  
Sbjct: 142 TIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIA 173
Query: 220 TYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELC 263
              +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 174 NQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 233
Query: 264 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 323
            G+  FQ  + +  ++ +  ++ P                     +++P           
Sbjct: 234 YGKTPFQ--QIINQISKLHAIIDP------------------NHEIEFP----------- 262
Query: 324 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                          D    DL  +L+  L+ DP  R++  E L HP+
Sbjct: 263 ---------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 34/223 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQ-QLAKHDKGGNRCV 107
           +G GTFG+V     +     VA+KI+  + I+       I+ E+   +L +H       +
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP----HII 74
Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++           +V E + G  L+D++ K+  R   ++  R + +Q+L  + + H   +
Sbjct: 75  KLYQVISTPTDFFMVMEYVSGGELFDYICKHG-RVEEME-ARRLFQQILSAVDYCHRHMV 132
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKPENVLL +    K+ D+  S +   D  + +             GS  Y  P+ 
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLR----------TSCGSPNYAAPE- 180
Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
             ++S R Y  PEV          DIWS G IL  L  G   F
Sbjct: 181 --VISGRLYAGPEV----------DIWSCGVILYALLCGTLPF 211

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 16  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 68
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 69  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 125
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 163
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +   N  V T  Y +PE++         D+W++GCI+ +L  G   F+ 
Sbjct: 164 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 212

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 97/228 (42%), Gaps = 35/228 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G+G FGQV++  +       AIK +R  ++     + E+ +L  L       N    +R
Sbjct: 14  LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASL-------NHQYVVR 66
Query: 111 ---NWFDYRNHI---------CIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQL 154
               W + RN +           +F +       +LYD +   N      +  R + RQ+
Sbjct: 67  YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR-LFRQI 125
Query: 155 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
           LE ++++H   +IH +LKP N+ +  S  +K+ D+  +          K + +S  I  +
Sbjct: 126 LEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA----------KNVHRSLDILKL 175
Query: 215 DFGSTTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVE 261
           D  +      +    + T  Y A EV+ G G +    D +S+G I  E
Sbjct: 176 DSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 93/227 (40%), Gaps = 36/227 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G FG      D++  E+VA+K +   +K  E    EI +  +  +H       V+ +
Sbjct: 27  IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREI-INHRSLRHPN----IVRFK 81
Query: 111 NWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHT 169
                  H+ IV E   G  L++  R  N   F  D  R   +QL+  +++ H + + H 
Sbjct: 82  EVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHR 139
Query: 170 DLKPENVLLVSSEY--IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           DLK EN LL  S    +K+ D+  S      +S     PKS+                  
Sbjct: 140 DLKLENTLLDGSPAPRLKIADFGYS-----KASVLHSQPKSA------------------ 176
Query: 228 YIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 273
             V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 177 --VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 123/298 (41%), Gaps = 71/298 (23%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAAMIEIEVLQQLAKH 99
           I  ++G G   +V +  + E+K++ AIK V       + +  YR     EI  L +L +H
Sbjct: 60  ILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQH 114
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
               ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE + 
Sbjct: 115 ---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVH 169
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +H   ++H+DLKP N L+V                               +K+IDFG  
Sbjct: 170 TIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIA 201
Query: 220 TYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELC 263
              +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 202 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261
Query: 264 TGEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 313
            G+  FQ  + +  ++ +  ++ P        +P+  L+ V +   K   + R+  PE
Sbjct: 262 YGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/348 (20%), Positives = 132/348 (37%), Gaps = 107/348 (30%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAAMIEIEVLQQLAKH 99
           I  ++G G   +V +  + E+K++ AIK V       + +  YR     EI  L +L +H
Sbjct: 12  ILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQH 66
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
               ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE + 
Sbjct: 67  ---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVH 121
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +H   ++H+DLKP N L+V                               +K+IDFG  
Sbjct: 122 TIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIA 153
Query: 220 TYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELC 263
              +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 154 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 213
Query: 264 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 323
            G+  FQ  + +  ++ +  ++ P                     +++P           
Sbjct: 214 YGKTPFQ--QIINQISKLHAIIDP------------------NHEIEFP----------- 242
Query: 324 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                          D    DL  +L+  L+ DP  R++  E L HP+
Sbjct: 243 ---------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 275

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 34/223 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQ-QLAKHDKGGNRCV 107
           +G GTFG+V           VA+KI+  + I+       I  E+   +L +H       +
Sbjct: 24  LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP----HII 79
Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++       + I +V E + G  L+D++ KN          R + +Q+L  + + H   +
Sbjct: 80  KLYQVISTPSDIFMVMEYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHRHMV 137
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKPENVLL +    K+ D+  S +   D  + +             GS  Y  P+ 
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRX----------SCGSPNYAAPE- 185
Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
             ++S R Y  PEV          DIWS G IL  L  G   F
Sbjct: 186 --VISGRLYAGPEV----------DIWSSGVILYALLCGTLPF 216

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 100/242 (41%), Gaps = 39/242 (16%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQI 109
           +G G FG      D+  KE+VA+K +         A I+  V +++  H    +   V+ 
Sbjct: 28  IGSGNFGVARLMRDKLTKELVAVKYIE------RGAAIDENVQREIINHRSLRHPNIVRF 81
Query: 110 RNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
           +       H+ I+ E   G  LY+  R  N   F  D  R   +QLL  +++ H + + H
Sbjct: 82  KEVILTPTHLAIIMEYASGGELYE--RICNAGRFSEDEARFFFQQLLSGVSYCHSMQICH 139
Query: 169 TDLKPENVLLVSSEY--IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
            DLK EN LL  S    +K+ D+  S      SS     PKS+                 
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYS-----KSSVLHSQPKST----------------- 177
Query: 227 NYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQ-THENLEHLAMMERV 284
              V T  Y APEV+L   +     D+WS G  L  +  G   F+   E  ++   ++R+
Sbjct: 178 ---VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRI 234
Query: 285 LG 286
           L 
Sbjct: 235 LS 236

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 25/144 (17%)
Query: 127 GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV 186
           G +L +++   ++    +D       Q+L+ I   HD+ ++H D+KP+N+L+ S++ +K+
Sbjct: 95  GPTLSEYIE--SHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKI 152
Query: 187 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGW 246
            D+             K + ++S  +              N+++ T  Y +PE   G   
Sbjct: 153 FDF----------GIAKALSETSLTQT-------------NHVLGTVQYFSPEQAKGEAT 189
Query: 247 TYPCDIWSVGCILVELCTGEALFQ 270
               DI+S+G +L E+  GE  F 
Sbjct: 190 DECTDIYSIGIVLYEMLVGEPPFN 213

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 43/222 (19%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV-----RGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++G G+FG V    D    E+VAIK +     +  +K+++  + E+  LQ+L +H     
Sbjct: 61  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI-IKEVRFLQKL-RHPN--- 115
Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
             +Q R  +   +   +V E    S  D L  +      +++   +    L+ +A++H  
Sbjct: 116 -TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHSH 173
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            MIH D+K  N+LL                            +   +K+ DFGS +   P
Sbjct: 174 NMIHRDVKAGNILLS---------------------------EPGLVKLGDFGSASIMAP 206
Query: 225 DQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELC 263
             N  V T ++ APEVIL +    +    D+WS+G   +EL 
Sbjct: 207 -ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 34/223 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQ-QLAKHDKGGNRCV 107
           +G GTFG+V     +     VA+KI+  + I+       I+ E+   +L +H       +
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP----HII 74
Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++           +V E + G  L+D++ K+  R   ++  R + +Q+L  + + H   +
Sbjct: 75  KLYQVISTPTDFFMVMEYVSGGELFDYICKHG-RVEEME-ARRLFQQILSAVDYCHRHMV 132
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKPENVLL +    K+ D+  S +   D  + +             GS  Y  P+ 
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRD----------SCGSPNYAAPE- 180
Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
             ++S R Y  PEV          DIWS G IL  L  G   F
Sbjct: 181 --VISGRLYAGPEV----------DIWSCGVILYALLCGTLPF 211

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 34/221 (15%)
Query: 51  MGEGTFGQV-LECWDRERK---EMVAIKIVRGI--KKYREAAMIEIEVLQQLA-KHDKGG 103
           +GEG FG+V L C+D       EMVA+K ++     ++R     EI++L+ L  +H    
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             C + +   +    + + +  LGS L D+L ++   S  +  +   A+Q+ E +A++H 
Sbjct: 82  KGCCEDQG--EKSLQLVMEYVPLGS-LRDYLPRH---SIGLAQLLLFAQQICEGMAYLHA 135
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              IH +L   NVLL +   +K+ D+  +   P+   Y++                   R
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV------------------R 177
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
            D +   S   + APE +    + Y  D+WS G  L EL T
Sbjct: 178 EDGD---SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 97/229 (42%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMIEIEVLQQLA-KHDKGGNRCVQ 108
           +G G FG      D++  E+VA+K I RG K    AA ++ E++   + +H       V+
Sbjct: 27  IGSGNFGVARLMRDKQSNELVAVKYIERGEKI---AANVKREIINHRSLRHPN----IVR 79
Query: 109 IRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
            +       H+ IV E   G  L++  R  N   F  D  R   +QL+  +++ H + + 
Sbjct: 80  FKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCHAMQVC 137
Query: 168 HTDLKPENVLLVSSEY--IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           H DLK EN LL  S    +K+ D+  S      SS     PKS+                
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICDFGYS-----KSSVLHSQPKST---------------- 176
Query: 226 QNYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 273
               V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 177 ----VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 40/229 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 45  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 97
Query: 107 VQIRNWF----DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F    D + +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 98  FFVKLYFCFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 154
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 155 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 192
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           +   N  V T  Y +PE++         D+W++GCI+ +L  G   F+ 
Sbjct: 193 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 241

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 93/227 (40%), Gaps = 36/227 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G FG      D++  E+VA+K +   +K  E    EI +  +  +H       V+ +
Sbjct: 26  IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRHPN----IVRFK 80
Query: 111 NWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHT 169
                  H+ IV E   G  L++  R  N   F  D  R   +QL+  +++ H + + H 
Sbjct: 81  EVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHR 138
Query: 170 DLKPENVLLVSSEY--IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           DLK EN LL  S    +K+ D+  S      SS     PKS+                  
Sbjct: 139 DLKLENTLLDGSPAPRLKICDFGYS-----KSSVLHSQPKST------------------ 175
Query: 228 YIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 273
             V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 176 --VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 220

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 43/222 (19%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV-----RGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++G G+FG V    D    E+VAIK +     +  +K+++  + E+  LQ+L +H     
Sbjct: 22  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI-IKEVRFLQKL-RHPN--- 76
Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
             +Q R  +   +   +V E    S  D L  +      +++   +    L+ +A++H  
Sbjct: 77  -TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHSH 134
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            MIH D+K  N+LL                            +   +K+ DFGS +   P
Sbjct: 135 NMIHRDVKAGNILL---------------------------SEPGLVKLGDFGSASIMAP 167
Query: 225 DQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELC 263
             N  V T ++ APEVIL +    +    D+WS+G   +EL 
Sbjct: 168 -ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 89/225 (39%), Gaps = 32/225 (14%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G FG      D++  E+VA+K +   +K  E    EI +  +  +H       V+ +
Sbjct: 27  IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRHPN----IVRFK 81
Query: 111 NWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHT 169
                  H+ IV E   G  L++  R  N   F  D  R   +QL+  +++ H + + H 
Sbjct: 82  EVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHR 139
Query: 170 DLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI 229
           DLK EN LL  S     P  K        SS     PKS+                    
Sbjct: 140 DLKLENTLLDGS---PAPRLKICAFGYSKSSVLHSQPKST-------------------- 176
Query: 230 VSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 273
           V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 40/223 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +GEG+F   +   +       AIKI+  R I K  +   +  E +V+ +L       +  
Sbjct: 38  LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 90
Query: 107 VQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++  + ++H
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH DLKPEN+LL    +I++ D+ ++                   KV+   S   +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPESK 185
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
           +   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 186 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 41/286 (14%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 18  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 71
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 72  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 130
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH DL+  N+L+  +   K+ D+  +    +D+    R      IK            
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIK------------ 177
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 283
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 178 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 227
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 326
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 228 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 45/245 (18%)
Query: 47  IHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYRE---AAMIEIEVLQQLAKHDKG 102
           + +++G G+FG V +  W  +    VA+KI++ +    E   A   E+ VL++       
Sbjct: 40  LSTRIGSGSFGTVYKGKWHGD----VAVKILKVVDPTPEQFQAFRNEVAVLRK------- 88
Query: 103 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
             R V I  +  Y  ++++ IV +   GSSLY  L     + F +  + +IARQ  + + 
Sbjct: 89  -TRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMD 146
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   +IH D+K  N+ L     +K+ D+                   + +K    GS 
Sbjct: 147 YLHAKNIIHRDMKSNNIFLHEGLTVKIGDF-----------------GLATVKSRWSGSQ 189
Query: 220 TYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
             E+P  + +     + APEVI       +++  D++S G +L EL TGE  +    N +
Sbjct: 190 QVEQPTGSVL-----WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD 244
Query: 277 HLAMM 281
            +  M
Sbjct: 245 QIIFM 249

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 41/286 (14%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 69
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 70  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH DL+  N+L+  +   K+ D+  +    +D+    R      IK            
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIK------------ 175
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 283
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 326
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 226 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 41/286 (14%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 25  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 78
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 79  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 137
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH DL+  N+L+  +   K+ D+  +    +D+    R      IK            
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIK------------ 184
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 283
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 185 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 234
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 326
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 235 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 274

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 41/286 (14%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 17  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 70
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 71  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 129
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH DL+  N+L+  +   K+ D+  +    +D+    R      IK            
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIK------------ 176
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 283
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 177 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 226
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 326
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 227 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 84/223 (37%), Gaps = 71/223 (31%)
Query: 152 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
           +Q+LE IA+ H   ++H +LKPEN+LL S                          K +A+
Sbjct: 135 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 170
Query: 212 KVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
           K+ DFG        + +     T  Y +PEV+    ++ P DIW+ G IL  L  G   F
Sbjct: 171 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
Query: 270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 329
              +                QH L     +A+  ++ G  D+P                 
Sbjct: 231 WDED----------------QHRL-----YAQ--IKAGAYDYPS---------------- 251
Query: 330 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                    D    +   L+  +L  +P  R+TA +AL+ P+ 
Sbjct: 252 ------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/298 (21%), Positives = 122/298 (40%), Gaps = 71/298 (23%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAAMIEIEVLQQLAKH 99
           I  ++G G   +V +  + E+K++ AIK V       + +  YR     EI  L +L +H
Sbjct: 60  ILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQH 114
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
               ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE + 
Sbjct: 115 ---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVH 169
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +H   ++H+DLKP N L+V                               +K+IDFG  
Sbjct: 170 TIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIA 201
Query: 220 TYERPDQNYIVSTR-----HYRAPEVILGLGWT-----------YPCDIWSVGCILVELC 263
              +PD   +V        +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 202 NQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261
Query: 264 TGEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 313
            G+  FQ  + +  ++ +  ++ P        +P+  L+ V +   K   + R+  PE
Sbjct: 262 YGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 41/286 (14%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 69
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 70  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH DL+  N+L+  +   K+ D+  +    +D+    R      IK            
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIK------------ 175
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 283
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 326
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 226 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 37/221 (16%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQQLAKHDKGGNRC 106
           S++G G  G V +   R    ++A K++   IK   R   + E++VL     H+      
Sbjct: 22  SELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 76
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V     F     I I  E + G SL   L++   +  P +++ +++  +L  +A++ +  
Sbjct: 77  VGFYGAFYSDGEISICMEHMDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREKH 134
Query: 166 MI-HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            I H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 135 QIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 173
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                V TR Y APE + G  ++   DIWS+G  LVEL  G
Sbjct: 174 -----VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 41/237 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHDKGGNRC 106
           +G G FG+V     +  + + A+KI+   +  + A       E +VL        G  + 
Sbjct: 82  IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN------GDCQW 135
Query: 107 VQIRNW-FDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
           +   ++ F   NH+ +V +  +G  L   L K   +  P D+ R    +++  I  +H L
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQL 194
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             +H D+KP+NVLL  + +I++ D+ S L    D +      +SS               
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV-----QSSV-------------- 235
Query: 225 DQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALFQTHENLE 276
                V T  Y +PE++     G+G   P CD WS+G  + E+  GE  F     +E
Sbjct: 236 ----AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 41/286 (14%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 22  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 75
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 76  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH DL+  N+L+  +   K+ D+  +    +D+    R      IK            
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIK------------ 181
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 283
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 182 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 326
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 232 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 84/222 (37%), Gaps = 71/222 (31%)
Query: 152 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
           +Q+LE IA+ H   ++H +LKPEN+LL S                          K +A+
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASKA------------------------KGAAV 147
Query: 212 KVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
           K+ DFG        + +     T  Y +PEV+    ++ P DIW+ G IL  L  G   F
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
Query: 270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 329
              +                QH L     +A+  ++ G  D+P                 
Sbjct: 208 WDED----------------QHRL-----YAQ--IKAGAYDYPS---------------- 228
Query: 330 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                    D    +   L+  +L  +P  R+TA +AL+ P+
Sbjct: 229 ------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 264

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           ++G G+FG+V    D++     A+K VR ++ +R   ++    L           R V +
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAEELMACAGLTS--------PRIVPL 150
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                    + I  E L G SL   +++      P D       Q LE + ++H   ++H
Sbjct: 151 YGAVREGPWVNIFMELLEGGSLGQLVKEQG--CLPEDRALYYLGQALEGLEYLHSRRILH 208
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-- 226
            D+K +NVLL S                 D S+           + DFG     +PD   
Sbjct: 209 GDVKADNVLLSS-----------------DGSH---------AALCDFGHAVCLQPDGLG 242
Query: 227 ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                 +YI  T  + APEV+LG       D+WS  C+++ +  G
Sbjct: 243 KSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 41/237 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHDKGGNRC 106
           +G G FG+V     +  + + A+KI+   +  + A       E +VL        G  + 
Sbjct: 98  IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN------GDCQW 151
Query: 107 VQIRNW-FDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
           +   ++ F   NH+ +V +  +G  L   L K   +  P D+ R    +++  I  +H L
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQL 210
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             +H D+KP+NVLL  + +I++ D+ S L    D +      +SS               
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV-----QSSV-------------- 251
Query: 225 DQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALFQTHENLE 276
                V T  Y +PE++     G+G   P CD WS+G  + E+  GE  F     +E
Sbjct: 252 ----AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 304

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 51  MGEGTFGQV-LECWDRERK---EMVAIKIVRGIK--KYREAAMIEIEVLQQLA-KHDKGG 103
           +GEG FG+V L C+D       EMVA+K ++     ++R     EI++L+ L  +H    
Sbjct: 39  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             C +       +  + + +  LGS L D+L ++   S  +  +   A+Q+ E +A++H 
Sbjct: 99  KGCCEDAGAASLQ--LVMEYVPLGS-LRDYLPRH---SIGLAQLLLFAQQICEGMAYLHA 152
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              IH DL   NVLL +   +K+ D+  +   P+    ++                   R
Sbjct: 153 QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRV------------------R 194
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
            D +   S   + APE +    + Y  D+WS G  L EL T
Sbjct: 195 EDGD---SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 41/286 (14%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 24  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 77
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 78  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH DL+  N+L+  +   K+ D+  +    +D+    R      IK            
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIK------------ 183
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 283
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 184 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 233
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 326
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 234 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 273

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           ++G G+FG+V    D++     A+K VR ++ +R   ++    L           R V +
Sbjct: 81  RLGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAEELMACAGLTS--------PRIVPL 131
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                    + I  E L G SL   +++      P D       Q LE + ++H   ++H
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLVKEQG--CLPEDRALYYLGQALEGLEYLHSRRILH 189
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-- 226
            D+K +NVLL S                 D S+           + DFG     +PD   
Sbjct: 190 GDVKADNVLLSS-----------------DGSH---------AALCDFGHAVCLQPDGLG 223
Query: 227 ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                 +YI  T  + APEV+LG       D+WS  C+++ +  G
Sbjct: 224 KDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 84/222 (37%), Gaps = 71/222 (31%)
Query: 152 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
           +Q+LE IA+ H   ++H +LKPEN+LL S                          K +A+
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASKA------------------------KGAAV 147
Query: 212 KVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
           K+ DFG        + +     T  Y +PEV+    ++ P DIW+ G IL  L  G   F
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
Query: 270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 329
              +                QH L     +A+  ++ G  D+P                 
Sbjct: 208 WDED----------------QHRL-----YAQ--IKAGAYDYPS---------------- 228
Query: 330 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                    D    +   L+  +L  +P  R+TA +AL+ P+
Sbjct: 229 ------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 264

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 84/222 (37%), Gaps = 71/222 (31%)
Query: 152 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
           +Q+LE IA+ H   ++H +LKPEN+LL S                          K +A+
Sbjct: 111 QQILESIAYCHSNGIVHRNLKPENLLLASKA------------------------KGAAV 146
Query: 212 KVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
           K+ DFG        + +     T  Y +PEV+    ++ P DIW+ G IL  L  G   F
Sbjct: 147 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
Query: 270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 329
              +                QH L     +A+  ++ G  D+P                 
Sbjct: 207 WDED----------------QHRL-----YAQ--IKAGAYDYPS---------------- 227
Query: 330 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                    D    +   L+  +L  +P  R+TA +AL+ P+
Sbjct: 228 ------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 263

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 44/235 (18%)
Query: 50  KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           ++G G FG V L  W    K+ VAIK +R      E  + E EV+ +L+ H K     VQ
Sbjct: 14  EIGSGQFGLVHLGYW--LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPK----LVQ 66
Query: 109 IRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ + C+I
Sbjct: 67  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVI 125
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DL   N L+                            ++  IKV DFG T +   DQ 
Sbjct: 126 HRDLAARNCLV---------------------------GENQVIKVSDFGMTRFVLDDQ- 157
Query: 228 YIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 276
           Y  ST       + +PEV     ++   D+WS G ++ E+ + G+  ++   N E
Sbjct: 158 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 44/235 (18%)
Query: 50  KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           ++G G FG V L  W    K+ VAIK +R      E  + E EV+ +L+ H K     VQ
Sbjct: 17  EIGSGQFGLVHLGYW--LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPK----LVQ 69
Query: 109 IRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ + C+I
Sbjct: 70  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVI 128
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DL   N L+                            ++  IKV DFG T +   DQ 
Sbjct: 129 HRDLAARNCLV---------------------------GENQVIKVSDFGMTRFVLDDQ- 160
Query: 228 YIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 276
           Y  ST       + +PEV     ++   D+WS G ++ E+ + G+  ++   N E
Sbjct: 161 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 215

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 43/228 (18%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIE--VLQQLAKHD--KGGN 104
           +G G++ +VL    ++   + A+K+V+   +    +   ++ E  V +Q + H    G +
Sbjct: 13  IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            C Q  +    R    I +   G  ++   R+   R  P +  R  + ++   + ++H+ 
Sbjct: 73  SCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER 125
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
            +I+ DLK +NVLL S  +IK+ DY   K  L     +S F   P               
Sbjct: 126 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP--------------- 170
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                NYI       APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 171 -----NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 44/235 (18%)
Query: 50  KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           ++G G FG V L  W    K+ VAIK +R      E  + E EV+ +L+ H K     VQ
Sbjct: 12  EIGSGQFGLVHLGYW--LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPK----LVQ 64
Query: 109 IRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ + C+I
Sbjct: 65  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVI 123
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DL   N L+                            ++  IKV DFG T +   DQ 
Sbjct: 124 HRDLAARNCLV---------------------------GENQVIKVSDFGMTRFVLDDQ- 155
Query: 228 YIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 276
           Y  ST       + +PEV     ++   D+WS G ++ E+ + G+  ++   N E
Sbjct: 156 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 210

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 94/233 (40%), Gaps = 40/233 (17%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDK 101
           +I  K+G G F +V           VA+K V+       K R   + EI++L+QL   + 
Sbjct: 35  RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN- 93
Query: 102 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLR-----KNNYRSFPIDLVREIARQLLE 156
                ++    F   N + IV E   +   D  R     K   R  P   V +   QL  
Sbjct: 94  ----VIKYYASFIEDNELNIVLELADAG--DLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            +  MH   ++H D+KP NV + ++  +K+ D                           F
Sbjct: 148 ALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRF---------------------F 186
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
            S T      + +V T +Y +PE I   G+ +  DIWS+GC+L E+   ++ F
Sbjct: 187 SSKTTA---AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           +G G FG+V     +  +++ A+K++     IK+   A   E   +   A         V
Sbjct: 82  IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN----SPWVV 137
Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           Q+   F    ++ +V E + G  L + +  +NY   P    R    +++  +  +H +  
Sbjct: 138 QLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY-DVPEKWARFYTAEVVLALDAIHSMGF 194
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           IH D+KP+N+LL  S ++K+ D+ + +          +M K   ++              
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCM----------KMNKEGMVRC------------- 231
Query: 227 NYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 269
           +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 43/228 (18%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIE--VLQQLAKHD--KGGN 104
           +G G++ +VL    ++   + A+K+V+   +    +   ++ E  V +Q + H    G +
Sbjct: 17  IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            C Q  +    R    I +   G  ++   R+   R  P +  R  + ++   + ++H+ 
Sbjct: 77  SCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER 129
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
            +I+ DLK +NVLL S  +IK+ DY   K  L     +S F   P               
Sbjct: 130 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP--------------- 174
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                NYI       APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 175 -----NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           +G G FG+V     +  +++ A+K++     IK+   A   E   +   A         V
Sbjct: 82  IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN----SPWVV 137
Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           Q+   F    ++ +V E + G  L + +  +NY   P    R    +++  +  +H +  
Sbjct: 138 QLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY-DVPEKWARFYTAEVVLALDAIHSMGF 194
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           IH D+KP+N+LL  S ++K+ D+ + +          +M K   ++              
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCM----------KMNKEGMVRC------------- 231
Query: 227 NYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 269
           +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           +G G FG+V     +  +++ A+K++     IK+   A   E   +   A         V
Sbjct: 77  IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN----SPWVV 132
Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           Q+   F    ++ +V E + G  L + +  +NY   P    R    +++  +  +H +  
Sbjct: 133 QLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY-DVPEKWARFYTAEVVLALDAIHSMGF 189
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           IH D+KP+N+LL  S ++K+ D+ + +          +M K   ++              
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTCM----------KMNKEGMVRC------------- 226
Query: 227 NYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 269
           +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 43/228 (18%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIE--VLQQLAKHD--KGGN 104
           +G G++ +VL    ++   + A+K+V+   +    +   ++ E  V +Q + H    G +
Sbjct: 28  IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            C Q  +    R    I +   G  ++   R+   R  P +  R  + ++   + ++H+ 
Sbjct: 88  SCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER 140
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
            +I+ DLK +NVLL S  +IK+ DY   K  L     +S F   P               
Sbjct: 141 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP--------------- 185
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                NYI       APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 186 -----NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 144/363 (39%), Gaps = 66/363 (18%)
Query: 46  KIHSKMGEGTFGQVLECWDRER---KEMVAIK-IVRGIKKYREAAMIEIEVLQQLAKHDK 101
           KI  K+GEGTF  V     + +   +E +A+K ++      R AA  E++ L        
Sbjct: 24  KIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAA--ELQCLTVAG---- 77
Query: 102 GGNRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
           G +  + ++  F   +H+ I    L   S  D L   +++      VRE    L + +  
Sbjct: 78  GQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQE-----VREYMLNLFKALKR 132
Query: 161 MHDLCMIHTDLKPENVLLVS--SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF-- 216
           +H   ++H D+KP N L      +Y  V D+  +  T             + I+++ F  
Sbjct: 133 IHQFGIVHRDVKPSNFLYNRRLKKYALV-DFGLAQGT-----------HDTKIELLKFVQ 180
Query: 217 GSTTYERPDQNYI-------------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVEL 262
                ER  QN                 T  +RAPEV+      T   D+WS G I + L
Sbjct: 181 SEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSL 240
Query: 263 CTGE-ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASR--- 318
            +G    ++  ++L  LA +  + G        R    A K   +  L   E  A     
Sbjct: 241 LSGRYPFYKASDDLTALAQIMTIRG-------SRETIQAAKTFGKSILCSKEVPAQDLRK 293
Query: 319 --ESIKSV-MKLPRLQNLIMQHVDHSAG------DLTHLLQGLLRYDPTDRLTAREALRH 369
             E ++ +    P+L + I  H  +  G      +   LL  LL  +P  R+TA EAL H
Sbjct: 294 LCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLH 353
Query: 370 PFF 372
           PFF
Sbjct: 354 PFF 356

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 88/225 (39%), Gaps = 32/225 (14%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           +G G FG      D++  E+VA+K +   +K  E    EI +  +  +H       V+ +
Sbjct: 27  IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRHPN----IVRFK 81
Query: 111 NWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHT 169
                  H+ IV E   G  L++  R  N   F  D  R   +QL+  +++ H + + H 
Sbjct: 82  EVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHR 139
Query: 170 DLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI 229
           DLK EN LL  S     P  K        SS     PK +                    
Sbjct: 140 DLKLENTLLDGS---PAPRLKICAFGYSKSSVLHSQPKDT-------------------- 176
Query: 230 VSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 273
           V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 71
Query: 101 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 72  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 126
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 216
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D  +FK + P  S I     
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI----- 181
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                             + APE +    ++   D+WS G +L EL T
Sbjct: 182 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE-------NV 67
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 126 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 158
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 159 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 27/225 (12%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGG 103
           ++  ++G G FG VL    ++  E VAIK  R     K RE   +EI+++++L   +   
Sbjct: 17  EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 104 NRCVQIRNWFDYRNHICIVFEKL--GSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAF 160
            R V         N + ++  +   G  L  +L +  N        +R +   +   + +
Sbjct: 77  AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 136
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H+  +IH DLKPEN++L        P  +  +H   D  Y K +         D G   
Sbjct: 137 LHENRIIHRDLKPENIVL-------QPGPQRLIHKIIDLGYAKEL---------DQGELC 180
Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
            E       V T  Y APE++    +T   D WS G +  E  TG
Sbjct: 181 TE------FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 27/225 (12%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGG 103
           ++  ++G G FG VL    ++  E VAIK  R     K RE   +EI+++++L   +   
Sbjct: 18  EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 104 NRCVQIRNWFDYRNHICIVFEKL--GSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAF 160
            R V         N + ++  +   G  L  +L +  N        +R +   +   + +
Sbjct: 78  AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 137
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H+  +IH DLKPEN++L        P  +  +H   D  Y K +         D G   
Sbjct: 138 LHENRIIHRDLKPENIVL-------QPGPQRLIHKIIDLGYAKEL---------DQGELC 181
Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
            E       V T  Y APE++    +T   D WS G +  E  TG
Sbjct: 182 TE------FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 66
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE-------NV 66
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 67
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 126 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 158
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 66
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
           E+     + + F H   +IH D+KP N+L+ ++  +KV D+                   
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDF------------------G 161
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 268
            A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  
Sbjct: 162 IARAIADSGNSVXQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 269 F 269
           F
Sbjct: 219 F 219

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 67
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 126 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 158
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 67
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 126 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 158
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 67
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 126 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 158
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE-------NV 66
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 66
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/336 (22%), Positives = 132/336 (39%), Gaps = 73/336 (21%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR-CVQI 109
           +G G+ G V+     + +  VA+K  R +  + + A++EI++L +   H       C + 
Sbjct: 23  LGYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDDHPNVIRYYCSET 79
Query: 110 RNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE-----IARQLLECIAFMHDL 164
            + F Y     I  E    +L D +   N     + L +E     + RQ+   +A +H L
Sbjct: 80  TDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +IH DLKP+N+L+ +S          + +     S F         K +D G +++ R 
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF------GLCKKLDSGQSSF-RT 187
Query: 225 DQNYIVSTRHYRAPEVILGLG-------WTYPCDIWSVGCILVE-LCTGEALFQTHENLE 276
           + N    T  +RAPE++            T   DI+S+GC+    L  G+  F       
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF------- 240
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
                                   +KY R   +           I+ +  L  ++ L   
Sbjct: 241 -----------------------GDKYSRESNI-----------IRGIFSLDEMKCL--- 263
Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           H      + T L+  ++ +DP  R TA + LRHP F
Sbjct: 264 HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +I   +G+G FG V    +++   +VA+K++   +  +E    ++    ++  H    N 
Sbjct: 26  EIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN- 84
Query: 106 CVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            +++ N+F  R  I ++ E      LY  L+K+   +F       I  +L + + + H  
Sbjct: 85  ILRLYNYFYDRRRIYLILEYAPRGELYKELQKSC--TFDEQRTATIMEELADALMYCHGK 142
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +IH D+KPEN+LL     +K+ D+  S+H P      +R                    
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LRR-------------------- 178
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
               +  T  Y  PE+I G       D+W +G +  EL  G   F++
Sbjct: 179 --KTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFES 223

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 67
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 126 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 158
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 13  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 65
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 66  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 124 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 156
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 157 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 66
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
           E+     + + F H   +IH D+KP N+++ ++  +KV D+                   
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDF------------------G 161
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 268
            A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  
Sbjct: 162 IARAIADSGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 269 FQTHENLEHLAMMERVLGPLP 289
           F T ++ + +A       P+P
Sbjct: 219 F-TGDSPDSVAYQHVREDPIP 238

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 66
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 66
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 66
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 67
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 126 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 158
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 43/228 (18%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIE--VLQQLAKHD--KGGN 104
           +G G++ +VL    ++   + A+++V+   +    +   ++ E  V +Q + H    G +
Sbjct: 60  IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            C Q  +    R    I +   G  ++   R+   R  P +  R  + ++   + ++H+ 
Sbjct: 120 SCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER 172
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
            +I+ DLK +NVLL S  +IK+ DY   K  L     +S F   P               
Sbjct: 173 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP--------------- 217
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                NYI       APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 218 -----NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 100/225 (44%), Gaps = 44/225 (19%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMI--EIEVLQQLAKHDKGGNRC 106
           +G+G+FG+V      + K+M A+K +   K  +  E   +  E++++Q       G    
Sbjct: 23  IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQ-------GLEHP 75
Query: 107 VQIRNWFDYRNH---ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             +  W+ +++      +V   LG  L   L++N +  F  + V+    +L+  + ++ +
Sbjct: 76  FLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKLFICELVMALDYLQN 133
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             +IH D+KP+N+LL    ++ + D+  +   P+++                   TT   
Sbjct: 134 QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI-----------------TT--- 173
Query: 224 PDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTG 265
                +  T+ Y APE+     G G+++  D WS+G    EL  G
Sbjct: 174 -----MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 66
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 34/221 (15%)
Query: 51  MGEGTFGQV-LECWDRERK---EMVAIKIVR--GIKKYREAAMIEIEVLQQLA-KHDKGG 103
           +GEG FG+V L C+D       EMVA+K ++     + R     EIE+L+ L  +H    
Sbjct: 17  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             C + +   +    + + +  LGS L D+L ++      +  +   A+Q+ E +A++H 
Sbjct: 77  KGCCEDQG--EKSVQLVMEYVPLGS-LRDYLPRH---CVGLAQLLLFAQQICEGMAYLHA 130
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              IH  L   NVLL +   +K+ D+  +   P+   Y++                   R
Sbjct: 131 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV------------------R 172
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
            D +   S   + APE +    + Y  D+WS G  L EL T
Sbjct: 173 EDGD---SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 46/225 (20%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           ++G G+FG+V    D++     A+K VR ++ +R   ++    L           R V +
Sbjct: 79  RLGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFRVEELVACAGLSS--------PRIVPL 129
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                    + I  E L G SL   +++      P D       Q LE + ++H   ++H
Sbjct: 130 YGAVREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILH 187
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-- 226
            D+K +NVLL S                            S   + DFG     +PD   
Sbjct: 188 GDVKADNVLLSSD--------------------------GSRAALCDFGHALCLQPDGLG 221
Query: 227 ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                 +YI  T  + APEV++G       DIWS  C+++ +  G
Sbjct: 222 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 34/221 (15%)
Query: 51  MGEGTFGQV-LECWDRERK---EMVAIKIVR--GIKKYREAAMIEIEVLQQLA-KHDKGG 103
           +GEG FG+V L C+D       EMVA+K ++     + R     EIE+L+ L  +H    
Sbjct: 16  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             C + +   +    + + +  LGS L D+L ++      +  +   A+Q+ E +A++H 
Sbjct: 76  KGCCEDQG--EKSVQLVMEYVPLGS-LRDYLPRH---CVGLAQLLLFAQQICEGMAYLHA 129
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              IH  L   NVLL +   +K+ D+  +   P+   Y++                   R
Sbjct: 130 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV------------------R 171
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
            D +   S   + APE +    + Y  D+WS G  L EL T
Sbjct: 172 EDGD---SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 44/235 (18%)
Query: 50  KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           ++G G FG V L  W    K+ VAIK ++      +  + E EV+ +L+ H K     VQ
Sbjct: 34  EIGSGQFGLVHLGYW--LNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLS-HPK----LVQ 86
Query: 109 IRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ + C+I
Sbjct: 87  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVI 145
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DL   N L+                            ++  IKV DFG T +   DQ 
Sbjct: 146 HRDLAARNCLV---------------------------GENQVIKVSDFGMTRFVLDDQ- 177
Query: 228 YIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 276
           Y  ST       + +PEV     ++   D+WS G ++ E+ + G+  ++   N E
Sbjct: 178 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 232

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 66
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 111/257 (43%), Gaps = 46/257 (17%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
            +MG GT GQV +   R+   ++A+K +R  G K+  +  +++++V+  L  HD     C
Sbjct: 31  GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV--LKSHD-----C 83
Query: 107 ---VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
              VQ    F     + I  E +G+   + L+K      P  ++ ++   +++ + ++ +
Sbjct: 84  PYIVQCFGTFITNTDVFIAMELMGTCA-EKLKKRMQGPIPERILGKMTVAIVKALYYLKE 142
Query: 164 L-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +IH D+KP N+LL     IK+ D+  S     D +                      
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA---------------------- 180
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYP-----CDIWSVGCILVELCTGEALFQT-HENLE 276
              ++       Y APE I     T P      D+WS+G  LVEL TG+  ++    + E
Sbjct: 181 ---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE 237
Query: 277 HLAMMERVLGP-LPQHM 292
            L  + +   P LP HM
Sbjct: 238 VLTKVLQEEPPLLPGHM 254

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 14  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 72
Query: 101 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 73  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 127
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 216
           + ++     IH +L   N+L+ +   +K+ D+  +   P+D  Y+K + P  S I     
Sbjct: 128 MEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI----- 182
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                             + APE +    ++   D+WS G +L EL T
Sbjct: 183 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 213

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 130/332 (39%), Gaps = 69/332 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR-CVQI 109
           +G G+ G V+     + +  VA+K  R +  + + A++EI++L +   H       C + 
Sbjct: 41  LGYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDDHPNVIRYYCSET 97
Query: 110 RNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE-----IARQLLECIAFMHDL 164
            + F Y     I  E    +L D +   N     + L +E     + RQ+   +A +H L
Sbjct: 98  TDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 152
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +IH DLKP+N+L+ +S          + +     S F         K +D G   + R 
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF------GLCKKLDSGQXXF-RX 205
Query: 225 DQNYIVSTRHYRAPEVI---LGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLAM 280
           + N    T  +RAPE++        T   DI+S+GC+    L  G+  F           
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF----------- 254
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
                               +KY R   +           I+ +  L  ++ L   H   
Sbjct: 255 -------------------GDKYSRESNI-----------IRGIFSLDEMKCL---HDRS 281
Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
              + T L+  ++ +DP  R TA + LRHP F
Sbjct: 282 LIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 130/332 (39%), Gaps = 69/332 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR-CVQI 109
           +G G+ G V+     + +  VA+K  R +  + + A++EI++L +   H       C + 
Sbjct: 41  LGYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDDHPNVIRYYCSET 97
Query: 110 RNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE-----IARQLLECIAFMHDL 164
            + F Y     I  E    +L D +   N     + L +E     + RQ+   +A +H L
Sbjct: 98  TDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 152
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +IH DLKP+N+L+ +S          + +     S F         K +D G   + R 
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF------GLCKKLDSGQXXF-RX 205
Query: 225 DQNYIVSTRHYRAPEVI---LGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLAM 280
           + N    T  +RAPE++        T   DI+S+GC+    L  G+  F           
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF----------- 254
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
                               +KY R   +           I+ +  L  ++ L   H   
Sbjct: 255 -------------------GDKYSRESNI-----------IRGIFSLDEMKCL---HDRS 281
Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
              + T L+  ++ +DP  R TA + LRHP F
Sbjct: 282 LIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
           E+     + + F H   +IH D+KP N+++ ++  +KV D+                   
Sbjct: 137 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDF------------------G 178
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 268
            A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  
Sbjct: 179 IARAIADSGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
Query: 269 F 269
           F
Sbjct: 236 F 236

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
           E+     + + F H   +IH D+KP N+++ ++  +KV D+                   
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDF------------------G 161
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 268
            A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  
Sbjct: 162 IARAIADSGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 269 F 269
           F
Sbjct: 219 F 219

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
           E+     + + F H   +IH D+KP N+++ ++  +KV D+                   
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDF------------------G 161
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 268
            A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  
Sbjct: 162 IARAIADSGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 269 F 269
           F
Sbjct: 219 F 219

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
           E+     + + F H   +IH D+KP N+++ ++  +KV D+                   
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDF------------------G 161
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 268
            A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  
Sbjct: 162 IARAIADSGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 269 F 269
           F
Sbjct: 219 F 219

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 123/286 (43%), Gaps = 41/286 (14%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++G G  G+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 16  KLVERLGAGQAGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 69
Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 70  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH DL+  N+L+  +   K+ D+  +    +D+    R      IK            
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDAEXTAREGAKFPIK------------ 175
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 283
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 326
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 226 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ +  +  H+        +
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE-------NV 67
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 126 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 158
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 46/225 (20%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           ++G G+FG+V    D++     A+K VR ++ +R   ++    L           R V +
Sbjct: 65  RVGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFRVEELVACAGLSS--------PRIVPL 115
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                    + I  E L G SL   +++      P D       Q LE + ++H   ++H
Sbjct: 116 YGAVREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILH 173
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-- 226
            D+K +NVLL S                            S   + DFG     +PD   
Sbjct: 174 GDVKADNVLLSSD--------------------------GSRAALCDFGHALCLQPDGLG 207
Query: 227 ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                 +YI  T  + APEV++G       DIWS  C+++ +  G
Sbjct: 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 46/225 (20%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           ++G G+FG+V    D++     A+K VR ++ +R   ++    L           R V +
Sbjct: 81  RVGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFRVEELVACAGLSS--------PRIVPL 131
Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                    + I  E L G SL   +++      P D       Q LE + ++H   ++H
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILH 189
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-- 226
            D+K +NVLL S                            S   + DFG     +PD   
Sbjct: 190 GDVKADNVLLSSD--------------------------GSRAALCDFGHALCLQPDGLG 223
Query: 227 ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                 +YI  T  + APEV++G       DIWS  C+++ +  G
Sbjct: 224 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 12/136 (8%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++  K+G G+FG++    + +  E VAIK+   +K      + E ++ + L    +GG  
Sbjct: 10  RLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-ENVKTKHPQLLYESKIYRIL----QGGTG 64
Query: 106 CVQIRNWFDYR-NHICIVFEKLGSSLYDFLRKNNY--RSFPIDLVREIARQLLECIAFMH 162
              +R WF    ++  +V + LG SL D     N+  R   +  V  +A Q++  + F+H
Sbjct: 65  IPNVR-WFGVEGDYNVLVMDLLGPSLEDLF---NFCSRKLSLKTVLMLADQMINRVEFVH 120
Query: 163 DLCMIHTDLKPENVLL 178
               +H D+KP+N L+
Sbjct: 121 SKSFLHRDIKPDNFLM 136

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 43/227 (18%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEI---EVLQQLAKHDKGGNR 105
           +KMGEG FG V + +       VA+K        + AAM++I   E+ QQ  +  K   +
Sbjct: 37  NKMGEGGFGVVYKGY--VNNTTVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 86
Query: 106 C-----VQIRNWFDYRNHICIVFEKL-GSSLYDFLR-KNNYRSFPIDLVREIARQLLECI 158
           C     V++  +    + +C+V+  +   SL D L   +        +  +IA+     I
Sbjct: 87  CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            F+H+   IH D+K  N+LL  +   K+ D+  +  + K                  F  
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FAQ 188
Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
           T       + IV T  Y APE + G   T   DI+S G +L+E+ TG
Sbjct: 189 TVM----XSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 44/235 (18%)
Query: 50  KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           ++G G FG V L  W    K+ VAIK +R      E  + E EV+ +L+ H K     VQ
Sbjct: 14  EIGSGQFGLVHLGYW--LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPK----LVQ 66
Query: 109 IRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ +  +I
Sbjct: 67  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEASVI 125
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DL   N L+                            ++  IKV DFG T +   DQ 
Sbjct: 126 HRDLAARNCLV---------------------------GENQVIKVSDFGMTRFVLDDQ- 157
Query: 228 YIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 276
           Y  ST       + +PEV     ++   D+WS G ++ E+ + G+  ++   N E
Sbjct: 158 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+V+    +E  ++ A+K+++     +    E  M E  +L     H       
Sbjct: 31  LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP----FL 86
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            Q+   F   + +  V E + G  L   ++K+  R F     R  A +++  + F+HD  
Sbjct: 87  TQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKG 144
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLK +NVLL    + K+ D+               M K         G TT     
Sbjct: 145 IIYRDLKLDNVLLDHEGHCKLADFG--------------MCKEGICN----GVTTAT--- 183
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
                 T  Y APE++  + +    D W++G +L E+  G A F+  EN + L
Sbjct: 184 ---FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA-ENEDDL 232

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 47/227 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 109
           +GEG  G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 66
Query: 110 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 226 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 266
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 44/235 (18%)
Query: 50  KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           ++G G FG V L  W    K+ VAIK +R      E  + E EV+ +L+ H K     VQ
Sbjct: 15  EIGSGQFGLVHLGYW--LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPK----LVQ 67
Query: 109 IRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +      +  IC+V E +    L D+LR      F  + +  +   + E +A++ + C+I
Sbjct: 68  LYGVCLEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVI 126
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DL   N L+                            ++  IKV DFG T +   DQ 
Sbjct: 127 HRDLAARNCLV---------------------------GENQVIKVSDFGMTRFVLDDQ- 158
Query: 228 YIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 276
           Y  ST       + +PEV     ++   D+WS G ++ E+ + G+  ++   N E
Sbjct: 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 213

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 133/337 (39%), Gaps = 87/337 (25%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKG 102
           +H  +G G FG+V  C   +  +M A+K +      +K+    A+ E  +L  ++  D  
Sbjct: 193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 252
Query: 103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
              C+     F   + +  + + + G  L+  L ++    F    +R  A +++  +  M
Sbjct: 253 FIVCMSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHM 308
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H+  +++ DLKP N+LL    ++++ D   +        + K+ P +S            
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS------------ 350
Query: 222 ERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                   V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H        
Sbjct: 351 --------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH-------- 394
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
                        K  D+H                  R ++   ++LP          D 
Sbjct: 395 -------------KTKDKH---------------EIDRMTLTMAVELP----------DS 416
Query: 341 SAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
            + +L  LL+GLL+ D   RL      A+E    PFF
Sbjct: 417 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 77/336 (22%), Positives = 130/336 (38%), Gaps = 73/336 (21%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR-CVQI 109
           +G G+ G V+     + +  VA+K  R +  + + A++EI++L +   H       C + 
Sbjct: 23  LGYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDDHPNVIRYYCSET 79
Query: 110 RNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE-----IARQLLECIAFMHDL 164
            + F Y     I  E    +L D +   N     + L +E     + RQ+   +A +H L
Sbjct: 80  TDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +IH DLKP+N+L+ +S          + +     S F         K +D G   + R 
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF------GLCKKLDSGQXXF-RX 187
Query: 225 DQNYIVSTRHYRAPEVILGLG-------WTYPCDIWSVGCILVE-LCTGEALFQTHENLE 276
           + N    T  +RAPE++            T   DI+S+GC+    L  G+  F       
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF------- 240
Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
                                   +KY R   +           I+ +  L  ++ L   
Sbjct: 241 -----------------------GDKYSRESNI-----------IRGIFSLDEMKCL--- 263
Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           H      + T L+  ++ +DP  R TA + LRHP F
Sbjct: 264 HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 95/232 (40%), Gaps = 41/232 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           +G G FG V E  ++      AIK +R   +   RE  M E++ L   AK +  G   V+
Sbjct: 13  LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKAL---AKLEHPG--IVR 67
Query: 109 IRNWFDYRNHICIVFEKLGSS-----LY---DFLRKNNYRSF----------PIDLVREI 150
             N +  +N      EKL  S     LY      RK N + +             +   I
Sbjct: 68  YFNAWLEKNTT----EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 151 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 210
             Q+ E + F+H   ++H DLKP N+     + +KV D+               M +   
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDF----------GLVTAMDQDEE 173
Query: 211 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
            + +      Y R      V T+ Y +PE I G  +++  DI+S+G IL EL
Sbjct: 174 EQTVLTPMPAYAR--HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 43/227 (18%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEI---EVLQQLAKHDKGGNR 105
           +KMGEG FG V + +       VA+K        + AAM++I   E+ QQ  +  K   +
Sbjct: 37  NKMGEGGFGVVYKGY--VNNTTVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 86
Query: 106 C-----VQIRNWFDYRNHICIVFEKL-GSSLYDFLR-KNNYRSFPIDLVREIARQLLECI 158
           C     V++  +    + +C+V+  +   SL D L   +        +  +IA+     I
Sbjct: 87  CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            F+H+   IH D+K  N+LL  +   K+ D+  +  + K                  F  
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FAQ 188
Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
           T         IV T  Y APE + G   T   DI+S G +L+E+ TG
Sbjct: 189 TVMXX----RIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 133/337 (39%), Gaps = 87/337 (25%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKG 102
           +H  +G G FG+V  C   +  +M A+K +      +K+    A+ E  +L  ++  D  
Sbjct: 192 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 251
Query: 103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
              C+     F   + +  + + + G  L+  L ++    F    +R  A +++  +  M
Sbjct: 252 FIVCMSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHM 307
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H+  +++ DLKP N+LL    ++++ D   +        + K+ P +S            
Sbjct: 308 HNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS------------ 349
Query: 222 ERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                   V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H        
Sbjct: 350 --------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH-------- 393
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
                        K  D+H                  R ++   ++LP          D 
Sbjct: 394 -------------KTKDKH---------------EIDRMTLTMAVELP----------DS 415
Query: 341 SAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
            + +L  LL+GLL+ D   RL      A+E    PFF
Sbjct: 416 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 452

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/230 (20%), Positives = 103/230 (44%), Gaps = 35/230 (15%)
Query: 44  ADKIHSK-MGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMIEIEVLQQLAKHDK 101
           +D IH + +G+G FGQ ++   RE  E++ +K ++R  ++ +   + E++V+        
Sbjct: 10  SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVM-------- 61
Query: 102 GGNRCVQIRNWFDY------RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
              RC++  N   +         +  + E +       + K+    +P       A+ + 
Sbjct: 62  ---RCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIA 118
Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             +A++H + +IH DL   N L+  ++ + V D+  +     +    K  P+        
Sbjct: 119 SGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE----KTQPE-------- 166
Query: 216 FGSTTYERPDQN---YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
            G  + ++PD+     +V   ++ APE+I G  +    D++S G +L E+
Sbjct: 167 -GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 130/339 (38%), Gaps = 79/339 (23%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLAKHDKGGNRCVQI 109
           +GEG   +V  C +    +  A+KI+     + R     E+E+L Q   H       +++
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH----RNVLEL 76
Query: 110 RNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
             +F+  +   +VFEK+  GS L    ++ ++      +V +     L+   F+H+  + 
Sbjct: 77  IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALD---FLHNKGIA 133
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---------- 217
           H DLKPEN+L      +                        S +K+ DFG          
Sbjct: 134 HRDLKPENILCEHPNQV------------------------SPVKICDFGLGSGIKLNGD 169
Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLG-----WTYPCDIWSVGCILVELCTGEALFQTH 272
            +    P+      +  Y APEV+         +   CD+WS+G IL  L +G   F   
Sbjct: 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229
Query: 273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 332
              +          P  Q+ML        + ++ G+ ++P+   +               
Sbjct: 230 CGSD-CGWDRGEACPACQNMLF-------ESIQEGKYEFPDKDWA--------------- 266
Query: 333 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
               H+  +A D   L+  LL  D   RL+A + L+HP+
Sbjct: 267 ----HISCAAKD---LISKLLVRDAKQRLSAAQVLQHPW 298

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 117/278 (42%), Gaps = 37/278 (13%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++ L +HDK    
Sbjct: 16  KLVKRLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTL-QHDK---- 69
Query: 106 CVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++         I I+ E +   SL DFL+ +      +  + + + Q+ E +A++   
Sbjct: 70  LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 129
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH DL+  NVL+  S   K+ D+  +    +D+ Y  R      IK            
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLA-RVIEDNEYTAREGAKFPIK------------ 176
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 283
                     + APE I    +T   D+WS G +L E+ T G+  +    N + +  + +
Sbjct: 177 ----------WTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQ 226
Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESI 321
                  + + RV+   ++     ++ W E A  R + 
Sbjct: 227 ------GYRMPRVENCPDELYDIMKMCWKEKAEERPTF 258

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 133/337 (39%), Gaps = 87/337 (25%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKG 102
           +H  +G G FG+V  C   +  +M A+K +      +K+    A+ E  +L  ++  D  
Sbjct: 193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 252
Query: 103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
              C+     F   + +  + + + G  L+  L ++    F    +R  A +++  +  M
Sbjct: 253 FIVCMSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHM 308
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H+  +++ DLKP N+LL    ++++ D   +        + K+ P +S            
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS------------ 350
Query: 222 ERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                   V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H        
Sbjct: 351 --------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH-------- 394
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
                        K  D+H                  R ++   ++LP          D 
Sbjct: 395 -------------KTKDKH---------------EIDRMTLTMAVELP----------DS 416
Query: 341 SAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
            + +L  LL+GLL+ D   RL      A+E    PFF
Sbjct: 417 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 133/337 (39%), Gaps = 87/337 (25%)
Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKG 102
           +H  +G G FG+V  C   +  +M A+K +      +K+    A+ E  +L  ++  D  
Sbjct: 193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 252
Query: 103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
              C+     F   + +  + + + G  L+  L ++    F    +R  A +++  +  M
Sbjct: 253 FIVCMSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHM 308
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H+  +++ DLKP N+LL    ++++ D   +        + K+ P +S            
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS------------ 350
Query: 222 ERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                   V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H        
Sbjct: 351 --------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH-------- 394
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
                        K  D+H                  R ++   ++LP          D 
Sbjct: 395 -------------KTKDKH---------------EIDRMTLTMAVELP----------DS 416
Query: 341 SAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
            + +L  LL+GLL+ D   RL      A+E    PFF
Sbjct: 417 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 29/135 (21%)
Query: 152 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
           RQ++  + + H   ++H DLK EN+LL +   IK+ D+  S               +   
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF------------TFGN 167
Query: 212 KVIDF-GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 270
           K+ +F GS  Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F 
Sbjct: 168 KLDEFCGSPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFD 214
Query: 271 THENLEHLAMMERVL 285
             +NL+ L   ERVL
Sbjct: 215 G-QNLKELR--ERVL 226

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 29/180 (16%)
Query: 118 HICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD---LCMIHTDLKP 173
           ++C+V E   G  L   L     +  P D++   A Q+   + ++HD   + +IH DLK 
Sbjct: 80  NLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKS 136
Query: 174 ENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPDQNYIVST 232
            N+L++     KV +   S               +  +K+ DFG +  + R  +      
Sbjct: 137 SNILILQ----KVENGDLS---------------NKILKITDFGLAREWHRTTKMSAAGA 177
Query: 233 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL--EHLAMMERVLGPLPQ 290
             + APEVI    ++   D+WS G +L EL TGE  F+  + L   +   M ++  P+P 
Sbjct: 178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPS 237

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 43/227 (18%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEI---EVLQQLAKHDKGGNR 105
           +KMGEG FG V + +       VA+K        + AAM++I   E+ QQ  +  K   +
Sbjct: 31  NKMGEGGFGVVYKGY--VNNTTVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 80
Query: 106 C-----VQIRNWFDYRNHICIVFEKL-GSSLYDFLR-KNNYRSFPIDLVREIARQLLECI 158
           C     V++  +    + +C+V+  +   SL D L   +        +  +IA+     I
Sbjct: 81  CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 140
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            F+H+   IH D+K  N+LL  +   K+ D+              R  +  A  V+    
Sbjct: 141 NFLHENHHIHRDIKSANILLDEAFTAKISDFG-----------LARASEKFAQXVM---- 185
Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                     IV T  Y APE + G   T   DI+S G +L+E+ TG
Sbjct: 186 -------XXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 224

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 45/245 (18%)
Query: 47  IHSKMGEGTFGQVLEC-WDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           +  ++G G+FG V +  W  +    VA+K   +     +  +A   E+ VL++       
Sbjct: 28  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 76
Query: 103 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
             R V I  +  Y  +  + IV +   GSSLY  L  +  + F +  + +IARQ    + 
Sbjct: 77  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMD 134
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   +IH DLK  N+ L     +K+ D+  +    + S                 GS 
Sbjct: 135 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-----------------GSH 177
Query: 220 TYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 178 QFEQLSGSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 232
Query: 277 HLAMM 281
            +  M
Sbjct: 233 QIIEM 237

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 27/134 (20%)
Query: 152 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
           RQ++  + + H   ++H DLK EN+LL +   IK+ D+         S+ F    K  A 
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGF-------SNEFTFGNKLDAF 172
Query: 212 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
                G+  Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F  
Sbjct: 173 ----CGAPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG 215
Query: 272 HENLEHLAMMERVL 285
            +NL+ L   ERVL
Sbjct: 216 -QNLKEL--RERVL 226

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 29/159 (18%)
Query: 127 GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV 186
           G  ++D+L  + +        R   RQ++  + + H   ++H DLK EN+LL +   IK+
Sbjct: 90  GGEVFDYLVAHGW--MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKI 147
Query: 187 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGW 246
            D+  S     + ++  ++           GS  Y  P+   +   + Y  PEV      
Sbjct: 148 ADFGFS----NEFTFGNKLDTFC-------GSPPYAAPE---LFQGKKYDGPEV------ 187
Query: 247 TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
               D+WS+G IL  L +G   F   +NL+ L   ERVL
Sbjct: 188 ----DVWSLGVILYTLVSGSLPFDG-QNLKELR--ERVL 219

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 30/220 (13%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  K+G G FG+V   +     + VA+K ++      +A + E  +++ L +HDK    
Sbjct: 15  KLVKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTL-QHDK---- 68
Query: 106 CVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++         I I+ E +   SL DFL+ +      +  + + + Q+ E +A++   
Sbjct: 69  LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH DL+  NVL+  S   K+ D+  +    +D+ Y  R      IK            
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLA-RVIEDNEYTAREGAKFPIK------------ 175
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                     + APE I    +T   ++WS G +L E+ T
Sbjct: 176 ----------WTAPEAINFGCFTIKSNVWSFGILLYEIVT 205

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 48/271 (17%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHDKGGNRC 106
           +G G FG+V     +   ++ A+KI+   +  + A       E +VL        G ++ 
Sbjct: 82  IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN------GDSKW 135
Query: 107 VQIRNW-FDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
           +   ++ F   N++ +V +  +G  L   L K   R  P ++ R    +++  I  +H L
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAIDSVHQL 194
Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             +H D+KP+N+L+  + +I++ D+ S L   +D +      +SS               
Sbjct: 195 HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV-----QSSV-------------- 235
Query: 225 DQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALFQTHENLEHLA 279
                V T  Y +PE++     G G   P CD WS+G  + E+  GE  F     +E   
Sbjct: 236 ----AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG 291
Query: 280 MM----ERVLGPLPQHMLKRVDRHAEKYVRR 306
            +    ER   P     +  V  +A+  +RR
Sbjct: 292 KIMNHKERFQFPT---QVTDVSENAKDLIRR 319

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 45/245 (18%)
Query: 47  IHSKMGEGTFGQVLEC-WDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           +  ++G G+FG V +  W  +    VA+K   +     +  +A   E+ VL++       
Sbjct: 28  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 76
Query: 103 GNRCVQIRNWFDYRN--HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
             R V I  +  Y     + IV +   GSSLY  L  +  + F +  + +IARQ    + 
Sbjct: 77  -TRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMD 134
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   +IH DLK  N+ L     +K+ D+  +    + S                 GS 
Sbjct: 135 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-----------------GSH 177
Query: 220 TYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 178 QFEQLSGSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 232
Query: 277 HLAMM 281
            +  M
Sbjct: 233 QIIEM 237

>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With 2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9- Isopropylpurine (Casp Target) Length = 310

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++  K+G G FG++    +    E VAIK+   IK       +E    +QL    +G   
Sbjct: 3   RVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPIKSRAPQLHLEYRFYKQLGSAGEG--- 58
Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             Q+  +     +  +V E LG SL D     + R+F +  V  IA QLL  + ++H   
Sbjct: 59  LPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLLSRMEYVHSKN 117
Query: 166 MIHTDLKPENVLL 178
           +I+ D+KPEN L+
Sbjct: 118 LIYRDVKPENFLI 130

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+V+    +  +E+ AIKI++     +    E  M+E  VL  L K        
Sbjct: 27  LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP----PFL 82
Query: 107 VQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRSF-PIDLVREIARQLLECIAFMHD 163
            Q+ + F   + +  V E +  G  +Y   +   ++    +    EI+  L     F+H 
Sbjct: 83  TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLF----FLHK 138
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             +I+ DLK +NV+L S  +IK+ D+        D                  G TT E 
Sbjct: 139 RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD------------------GVTTRE- 179
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                   T  Y APE+I    +    D W+ G +L E+  G+  F   +  E
Sbjct: 180 -----FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 96/228 (42%), Gaps = 31/228 (13%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKGGNRC--- 106
           + EG F  V E  D       A+K +   ++ +  A+I E+  +++L+ H      C   
Sbjct: 36  LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 107 -VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRS-FPIDLVREIARQLLECIAFMH-- 162
            +        +    ++ E     L +FL+K   R     D V +I  Q    +  MH  
Sbjct: 96  SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ 155
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSL---HTPKDSSYFKRMPKSSAIKVIDFGST 219
              +IH DLK EN+LL +   IK+ D+ S+    H P  S   +R             + 
Sbjct: 156 KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRR------------AL 203
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPC----DIWSVGCILVELC 263
             E   +N   +T  YR PE+I  L   +P     DIW++GCIL  LC
Sbjct: 204 VEEEITRN---TTPMYRTPEII-DLYSNFPIGEKQDIWALGCILYLLC 247

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 16  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 74
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E++     L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 75  VIRLLDWFERPDSFVLILERMEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 132
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 133 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 179
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 180 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 220

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 44  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 102
Query: 101 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 103 N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 157
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 216
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 158 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 212
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                             + APE +    ++   D+WS G +L EL T
Sbjct: 213 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 243

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 27/134 (20%)
Query: 152 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
           RQ++  + + H   ++H DLK EN+LL +   IK+ D+  S     + ++  ++      
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFC-- 173
Query: 212 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
                GS  Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F  
Sbjct: 174 -----GSPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG 215
Query: 272 HENLEHLAMMERVL 285
            +NL+ L   ERVL
Sbjct: 216 -QNLKELR--ERVL 226

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 27/134 (20%)
Query: 152 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
           RQ++  + + H   ++H DLK EN+LL +   IK+ D+  S     + ++  ++      
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFC-- 173
Query: 212 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
                GS  Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F  
Sbjct: 174 -----GSPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG 215
Query: 272 HENLEHLAMMERVL 285
            +NL+ L   ERVL
Sbjct: 216 -QNLKELR--ERVL 226

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 27/134 (20%)
Query: 152 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
           RQ++  + + H   ++H DLK EN+LL +   IK+ D+  S     + ++  ++      
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFC-- 173
Query: 212 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
                GS  Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F  
Sbjct: 174 -----GSPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG 215
Query: 272 HENLEHLAMMERVL 285
            +NL+ L   ERVL
Sbjct: 216 -QNLKELR--ERVL 226

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 31  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 89
Query: 101 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 90  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 144
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 216
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 199
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                             + APE +    ++   D+WS G +L EL T
Sbjct: 200 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 42/228 (18%)
Query: 51  MGEGTFGQVLEC----WDRERKEM-VAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGG 103
           +G G FG+V+E       +E   + VA+K+++       +EA M E++++  L +H+   
Sbjct: 46  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 102
Query: 104 NRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLR--------KNNYRSFPIDLVREIARQL 154
              V +     +   + ++ E      L +FLR        K + R   +  +   + Q+
Sbjct: 103 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 155 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
            + +AF+     IH D+   NVLL +    K+ D+  +     DS+Y  +      +K  
Sbjct: 162 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-- 219
Query: 215 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
                               + APE I    +T   D+WS G +L E+
Sbjct: 220 --------------------WMAPESIFDCVYTVQSDVWSYGILLWEI 247

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 31  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 89
Query: 101 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 90  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 144
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 216
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 199
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                             + APE +    ++   D+WS G +L EL T
Sbjct: 200 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           +G G FG+V     +  +++ A+K++     IK+   A   E   +   A         V
Sbjct: 83  IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN----SPWVV 138
Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           Q+   F    ++ +V E + G  L + +  +NY   P    +    +++  +  +H + +
Sbjct: 139 QLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNY-DVPEKWAKFYTAEVVLALDAIHSMGL 195
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           IH D+KP+N+LL    ++K+ D+ + +          +M ++  +               
Sbjct: 196 IHRDVKPDNMLLDKHGHLKLADFGTCM----------KMDETGMVHC------------- 232
Query: 227 NYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 269
           +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 233 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 27/134 (20%)
Query: 152 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
           RQ++  + + H   ++H DLK EN+LL +   IK+ D+         S+ F    K  A 
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGF-------SNEFTFGNKLDAF 172
Query: 212 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
                G+  Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F  
Sbjct: 173 ----CGAPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG 215
Query: 272 HENLEHLAMMERVL 285
            +NL+ L   ERVL
Sbjct: 216 -QNLKELR--ERVL 226

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 32/239 (13%)
Query: 50  KMGEGTFGQVLECWDRERKEM--VAIKIVR-GIKKY-REAAMIEIEVLQQLAKHDKGGNR 105
           ++G G FG V +   R RK+   VAIK+++ G +K   E  M E +++ QL         
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-----DNPY 71
Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            V++         + ++    G  L+ FL        P+  V E+  Q+   + ++ +  
Sbjct: 72  IVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
            +H DL   NVLLV+  Y K+ D+  S     D SY+                +  + P 
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT-------------ARSAGKWPL 177
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLAMMER 283
           + Y        APE I    ++   D+WS G  + E L  G+  ++  +  E +A +E+
Sbjct: 178 KWY--------APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 228

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 71
Query: 101 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 72  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 126
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 216
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 181
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                             + APE +    ++   D+WS G +L EL T
Sbjct: 182 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQQLAKHDKGGNRC 106
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 31  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 85
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V     F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ +  
Sbjct: 86  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH 143
Query: 166 MI-HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            I H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 144 KIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 182
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 183 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQQLAKHDKGGNRC 106
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 39  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 93
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V     F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ +  
Sbjct: 94  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH 151
Query: 166 MI-HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            I H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 152 KIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 190
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 191 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 45/245 (18%)
Query: 47  IHSKMGEGTFGQVLEC-WDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           +  ++G G+FG V +  W  +    VA+K   +     +  +A   E+ VL++       
Sbjct: 16  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 64
Query: 103 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
             R V I  +  Y  +  + IV +   GSSLY  L  +  + F +  + +IARQ    + 
Sbjct: 65  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMD 122
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   +IH DLK  N+ L     +K+ D+                   + +K    GS 
Sbjct: 123 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDF-----------------GLATVKSRWSGSH 165
Query: 220 TYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 166 QFEQLSGSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 220
Query: 277 HLAMM 281
            +  M
Sbjct: 221 QIIEM 225

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 42/228 (18%)
Query: 51  MGEGTFGQVLEC----WDRERKEM-VAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGG 103
           +G G FG+V+E       +E   + VA+K+++       +EA M E++++  L +H+   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 104 NRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLR--------KNNYRSFPIDLVREIARQL 154
              V +     +   + ++ E      L +FLR        K + R   +  +   + Q+
Sbjct: 111 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 155 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
            + +AF+     IH D+   NVLL +    K+ D+  +     DS+Y  +      +K  
Sbjct: 170 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-- 227
Query: 215 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
                               + APE I    +T   D+WS G +L E+
Sbjct: 228 --------------------WMAPESIFDCVYTVQSDVWSYGILLWEI 255

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 103/266 (38%), Gaps = 57/266 (21%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKI-----VRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +G+G FG V        +  VAIK+     V G     ++    +EV   L K   GG  
Sbjct: 39  LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEV-ALLWKVGAGGGH 97
Query: 106 CVQIR--NWFDYRNHICIVFEKL--GSSLYDFL-RKNNYRSFPIDLVREIARQLLECIAF 160
              IR  +WF+ +    +V E+      L+D++  K      P    R    Q++  I  
Sbjct: 98  PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGP---SRCFFGQVVAAIQH 154
Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
            H   ++H D+K EN+L+                            +    K+IDFGS  
Sbjct: 155 CHSRGVVHRDIKDENILIDL--------------------------RRGCAKLIDFGSGA 188
Query: 221 --YERPDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQ------- 270
             ++ P  ++   TR Y  PE I    +   P  +WS+G +L ++  G+  F+       
Sbjct: 189 LLHDEPYTDFD-GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILE 247
Query: 271 ------THENLEHLAMMERVLGPLPQ 290
                  H + +  A++ R L P P 
Sbjct: 248 AELHFPAHVSPDCCALIRRCLAPKPS 273

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 20  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 78
Query: 101 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 79  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 133
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 216
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 134 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 188
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                             + APE +    ++   D+WS G +L EL T
Sbjct: 189 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 219

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 18  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 76
Query: 101 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 77  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 131
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 216
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 132 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 186
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                             + APE +    ++   D+WS G +L EL T
Sbjct: 187 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 217

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 19  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 77
Query: 101 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 78  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 132
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 216
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 133 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 187
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                             + APE +    ++   D+WS G +L EL T
Sbjct: 188 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 218

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 95/237 (40%), Gaps = 29/237 (12%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +I   +G G F +V     ++  ++ A+KI   + K+      E+   ++       G+R
Sbjct: 64  EILKVIGRGAFSEVAVVKMKQTGQVYAMKI---MNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 106 --CVQIRNWFDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
               Q+   F   N++ +V E  +G  L   L K   R  P ++ R    +++  I  +H
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSVH 179
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
            L  +H D+KP+N+LL    +I++ D+ S L    D          +   ++  G+  Y 
Sbjct: 180 RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD---------GTVRSLVAVGTPDYL 230
Query: 223 RPDQNYIV---STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
            P+    V          PE          CD W++G    E+  G+  F      E
Sbjct: 231 SPEILQAVGGGPGTGSYGPE----------CDWWALGVFAYEMFYGQTPFYADSTAE 277

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 17  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 75
Query: 101 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 76  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 130
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 216
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 131 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 185
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                             + APE +    ++   D+WS G +L EL T
Sbjct: 186 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 216

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 16  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 74
Query: 101 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 75  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 129
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 216
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 184
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                             + APE +    ++   D+WS G +L EL T
Sbjct: 185 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIKKY-REAAMIEIEVLQQLAKHDKGGNRC 106
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 74  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 128
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V     F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ +  
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH 186
Query: 166 MI-HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            I H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 187 KIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 225
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 226 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIKK-YREAAMIEIEVLQQLAKHDKGGNRC 106
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 12  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 66
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V     F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ +  
Sbjct: 67  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH 124
Query: 166 MI-HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            I H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 163
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 164 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 12  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 70
Query: 101 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 71  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 125
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 216
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 126 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 180
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                             + APE +    ++   D+WS G +L EL T
Sbjct: 181 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 211

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 71
Query: 101 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 72  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 126
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 216
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 181
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                             + APE +    ++   D+WS G +L EL T
Sbjct: 182 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 42/248 (16%)
Query: 46  KIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAK 98
           KI   +G G FG+V  C  R     +R+  VAIK ++     K R   + E  ++ Q   
Sbjct: 32  KIEKVIGVGEFGEV--CSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDH 89
Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
            +      + +         + I+ E +   SL  FLRKN+ R   I LV  + R +   
Sbjct: 90  PN-----IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV-GMLRGIGSG 143
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVID 215
           + ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K        
Sbjct: 144 MKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK-------- 195
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN 274
                         +  R + APE I    +T   D+WS G ++ E+ + GE  +    N
Sbjct: 196 --------------IPIR-WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 240
Query: 275 LEHLAMME 282
            + +  +E
Sbjct: 241 QDVIKAIE 248

>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 104/250 (41%), Gaps = 42/250 (16%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++  K+G G+FG +    D    E VAIK+   +K       IE ++ + +    +GG  
Sbjct: 10  RLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-ECVKTKHPQLHIESKIYKMM----QGGVG 64
Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
              IR      ++  +V E LG SL D     + R F +  V  +A Q++  I ++H   
Sbjct: 65  IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKN 123
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-------S 218
            IH D+KP+N L+   +                        K + + +IDFG       +
Sbjct: 124 FIHRDVKPDNFLMGLGK------------------------KGNLVYIIDFGLAKKYRDA 159
Query: 219 TTYE----RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
            T++    R ++N +  T  Y +    LG+  +   D+ S+G +L+    G   +Q  + 
Sbjct: 160 RTHQHIPYRENKN-LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA 218
Query: 275 LEHLAMMERV 284
                  ER+
Sbjct: 219 ATKRQKYERI 228

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 11  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 69
Query: 101 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 70  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 124
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 216
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 125 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 179
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                             + APE +    ++   D+WS G +L EL T
Sbjct: 180 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 210

>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 104/250 (41%), Gaps = 42/250 (16%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++  K+G G+FG +    D    E VAIK+   +K       IE ++ + +    +GG  
Sbjct: 12  RLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-ECVKTKHPQLHIESKIYKMM----QGGVG 66
Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
              IR      ++  +V E LG SL D     + R F +  V  +A Q++  I ++H   
Sbjct: 67  IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKN 125
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-------S 218
            IH D+KP+N L+   +                        K + + +IDFG       +
Sbjct: 126 FIHRDVKPDNFLMGLGK------------------------KGNLVYIIDFGLAKKYRDA 161
Query: 219 TTYE----RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
            T++    R ++N +  T  Y +    LG+  +   D+ S+G +L+    G   +Q  + 
Sbjct: 162 RTHQHIPYRENKN-LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA 220
Query: 275 LEHLAMMERV 284
                  ER+
Sbjct: 221 ATKRQKYERI 230

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQQLAKHDKGGNRC 106
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 12  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 66
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V     F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ +  
Sbjct: 67  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH 124
Query: 166 MI-HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            I H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 163
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 164 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQQLAKHDKGGNRC 106
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 12  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 66
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V     F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ +  
Sbjct: 67  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH 124
Query: 166 MI-HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            I H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 163
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 164 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 29/135 (21%)
Query: 152 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
           RQ++  + + H   ++H DLK EN+LL     IK+ D+  S               +   
Sbjct: 121 RQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF------------TVGN 168
Query: 212 KVIDF-GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 270
           K+  F GS  Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F 
Sbjct: 169 KLDTFCGSPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFD 215
Query: 271 THENLEHLAMMERVL 285
             +NL+ L   ERVL
Sbjct: 216 G-QNLKELR--ERVL 227

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 42/248 (16%)
Query: 46  KIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAK 98
           KI   +G G FG+V  C  R     +R+  VAIK ++     K R   + E  ++ Q   
Sbjct: 11  KIEKVIGVGEFGEV--CSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDH 68
Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
            +      + +         + I+ E +   SL  FLRKN+ R   I LV  + R +   
Sbjct: 69  PN-----IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV-GMLRGIGSG 122
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVID 215
           + ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K        
Sbjct: 123 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK-------- 174
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN 274
                         +  R + APE I    +T   D+WS G ++ E+ + GE  +    N
Sbjct: 175 --------------IPIR-WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 219
Query: 275 LEHLAMME 282
            + +  +E
Sbjct: 220 QDVIKAIE 227

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 42/248 (16%)
Query: 46  KIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAK 98
           KI   +G G FG+V  C  R     +R+  VAIK ++     K R   + E  ++ Q   
Sbjct: 17  KIEKVIGVGEFGEV--CSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDH 74
Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
            +      + +         + I+ E +   SL  FLRKN+ R   I LV  + R +   
Sbjct: 75  PN-----IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV-GMLRGIGSG 128
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVID 215
           + ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K        
Sbjct: 129 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK-------- 180
Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN 274
                         +  R + APE I    +T   D+WS G ++ E+ + GE  +    N
Sbjct: 181 --------------IPIR-WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 225
Query: 275 LEHLAMME 282
            + +  +E
Sbjct: 226 QDVIKAIE 233

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 29/140 (20%)
Query: 147 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 206
            R   RQ++  + + H   ++H DLK EN+LL +   IK+ D+  S              
Sbjct: 113 ARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF----------- 161
Query: 207 KSSAIKVIDF-GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
            +   K+  F GS  Y  P+   +   + Y  PEV          D+WS+G IL  L +G
Sbjct: 162 -TVGGKLDTFCGSPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSG 207
Query: 266 EALFQTHENLEHLAMMERVL 285
              F   +NL+ L   ERVL
Sbjct: 208 SLPFDG-QNLKELR--ERVL 224

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+ E + F+H   ++H DLKP N+     + +KV D+       +D        + + + 
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEE------EQTVLT 225
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
            +   +T   +      V T+ Y +PE I G  +++  DI+S+G IL EL
Sbjct: 226 PMPAYATHXGQ------VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 27/139 (19%)
Query: 147 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 206
            R   RQ++  + + H   ++H DLK EN+LL +   IK+ D+         S+ F    
Sbjct: 116 ARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGF-------SNEFTVGG 168
Query: 207 KSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
           K  A      G+  Y  P+   +   + Y  PEV          D+WS+G IL  L +G 
Sbjct: 169 KLDAF----CGAPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGS 211
Query: 267 ALFQTHENLEHLAMMERVL 285
             F   +NL+ L   ERVL
Sbjct: 212 LPFDG-QNLKELR--ERVL 227

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 132/334 (39%), Gaps = 69/334 (20%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLAKHDKGGNRCVQI 109
           +GEG   +V  C +    +  A+KI+     + R     E+E+L Q   H       +++
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH----RNVLEL 76
Query: 110 RNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
             +F+  +   +VFEK+  GS L    ++ ++      +V +     L+   F+H+  + 
Sbjct: 77  IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALD---FLHNKGIA 133
Query: 168 HTDLKPENVLL-----VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
           H DLKPEN+L      VS   I   D  S +    D S     P S+   +   GS    
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS-----PISTPELLTPCGSA--- 185
Query: 223 RPDQNYIVSTRHYRAPEVILGLG-----WTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
                       Y APEV+         +   CD+WS+G IL  L +G   F      + 
Sbjct: 186 -----------EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD- 233
Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 337
                    P  Q+ML        + ++ G+ ++P+   +                   H
Sbjct: 234 CGWDRGEACPACQNMLF-------ESIQEGKYEFPDKDWA-------------------H 267
Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
           +  +A D   L+  LL  D   RL+A + L+HP+
Sbjct: 268 ISCAAKD---LISKLLVRDAKQRLSAAQVLQHPW 298

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQQLAKHDKGGNRC 106
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 12  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 66
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V     F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ +  
Sbjct: 67  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH 124
Query: 166 MI-HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            I H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 163
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 164 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQQLAKHDKGGNRC 106
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 12  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 66
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V     F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ +  
Sbjct: 67  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH 124
Query: 166 MI-HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            I H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 163
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 164 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 104/235 (44%), Gaps = 37/235 (15%)
Query: 40  FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLA 97
           F+A   K   ++G G +G V +   +   +++A+K +R    +K ++  +++++V+ +  
Sbjct: 19  FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMR-- 76
Query: 98  KHDKGGNRCVQIRNWFD--YRNHICIVFEKLGSSLYDFLRKNNYRSF----PIDLVREIA 151
                 + C  I  ++   +R   C +  +L S+ +D   K  Y       P +++ +I 
Sbjct: 77  -----SSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKIT 131
Query: 152 RQLLECIAFM-HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 210
              ++ +  +  +L +IH D+KP N+LL  S  IK+ D+  S                S 
Sbjct: 132 LATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL-----------VDSI 180
Query: 211 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
            K  D G   Y  P++    ++R           G+    D+WS+G  L EL TG
Sbjct: 181 AKTRDAGCRPYMAPERIDPSASRQ----------GYDVRSDVWSLGITLYELATG 225

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/232 (21%), Positives = 93/232 (40%), Gaps = 32/232 (13%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR--C 106
           S++G G++G+V +   +E   + A+K  R +  +R         L ++  H+K G    C
Sbjct: 63  SRLGHGSYGEVFKVRSKEDGRLYAVK--RSMSPFR-GPKDRARKLAEVGSHEKVGQHPCC 119
Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++   ++    + +  E  G SL          S P   V    R  L  +A +H   +
Sbjct: 120 VRLEQAWEEGGILYLQTELCGPSLQQHCEAWGA-SLPEAQVWGYLRDTLLALAHLHSQGL 178
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H D+KP N+ L      K+ D+                     +++   G+   +  D 
Sbjct: 179 VHLDVKPANIFLGPRGRCKLGDF------------------GLLVELGTAGAGEVQEGDP 220
Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
            Y+       APE++ G  +    D++S+G  ++E+     L    E  + L
Sbjct: 221 RYM-------APELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 36/238 (15%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHD 100
           ++   +G G FG V           VAIK V    I  + E      + +EV+  L K  
Sbjct: 7   QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVS 65
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
            G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +
Sbjct: 66  SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAV 123
Query: 159 AFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
              H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF 
Sbjct: 124 RHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFD 170
Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            T    P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 216

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 146 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 205
           L+  I RQ+   + ++H+  + H D+KPEN L  ++                        
Sbjct: 169 LISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN------------------------ 204
Query: 206 PKSSAIKVIDFGSTT--YERPDQNYI-----VSTRHYRAPEVILGLGWTY--PCDIWSVG 256
            KS  IK++DFG +   Y+  +  Y        T ++ APEV+     +Y   CD WS G
Sbjct: 205 -KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263
Query: 257 CILVELCTGEALF 269
            +L  L  G   F
Sbjct: 264 VLLHLLLMGAVPF 276

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 64  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 122
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 180
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 181 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 227
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 228 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 268

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 102/245 (41%), Gaps = 41/245 (16%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 106
           +G G FG+V  C  +   ++ A K +   +  +    + AM+E ++L ++  H +     
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV--HSR---FI 247
Query: 107 VQIRNWFDYRNHICIVFEKLGSS-----LYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           V +   F+ +  +C+V   +        +Y+    N     P  +      Q++  +  +
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF--YTAQIVSGLEHL 305
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +I+ DLKPENVLL     +++ D   ++             K+   K   +  T  
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP- 353
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLAM 280
                        + APE++LG  + +  D +++G  L E+      F+   E +E+  +
Sbjct: 354 ------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
Query: 281 MERVL 285
            +RVL
Sbjct: 402 KQRVL 406

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 39  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 97
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 98  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 155
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 156 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 202
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 203 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 243

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 37/221 (16%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQQLAKHDKGGNRC 106
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 15  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 69
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V     F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ +  
Sbjct: 70  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH 127
Query: 166 MI-HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            I H D+KP N+L+ S   IK+ D+  S                        G    E  
Sbjct: 128 KIMHRDVKPSNILVNSRGEIKLCDFGVS------------------------GQLIDEM- 162
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
             N  V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 163 -ANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           ++H DLKP NV L   + +K+ D+  +     D+S+ K                      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--------------------- 175
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
               V T +Y +PE +  + +    DIWS+GC+L ELC 
Sbjct: 176 ---FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 59  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 117
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 175
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 176 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 222
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 223 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 263

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 51  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 109
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 167
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 168 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 214
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 215 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 255

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 102/245 (41%), Gaps = 41/245 (16%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 106
           +G G FG+V  C  +   ++ A K +   +  +    + AM+E ++L ++  H +     
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV--HSR---FI 247
Query: 107 VQIRNWFDYRNHICIVFEKLGSS-----LYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           V +   F+ +  +C+V   +        +Y+    N     P  +      Q++  +  +
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF--YTAQIVSGLEHL 305
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +I+ DLKPENVLL     +++ D   ++             K+   K   +  T  
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP- 353
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLAM 280
                        + APE++LG  + +  D +++G  L E+      F+   E +E+  +
Sbjct: 354 ------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
Query: 281 MERVL 285
            +RVL
Sbjct: 402 KQRVL 406

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 44  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 102
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 160
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 161 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 207
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 208 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 248

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           ++H DLKP NV L   + +K+ D+  +     D+S+ K                      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA--------------------- 175
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
               V T +Y +PE +  + +    DIWS+GC+L ELC 
Sbjct: 176 ---FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 44  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 102
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 160
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 161 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 207
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 208 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 248

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 45  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 103
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 161
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 162 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 208
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 209 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 249

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 44  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 102
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 160
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 161 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 207
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 208 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 248

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 45  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 103
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 161
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 162 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 208
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 209 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 249

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 45  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 103
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 161
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 162 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 208
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 209 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 249

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 44  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 102
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 160
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 161 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 207
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 208 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 248

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 102/245 (41%), Gaps = 41/245 (16%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 106
           +G G FG+V  C  +   ++ A K +   +  +    + AM+E ++L ++  H +     
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV--HSR---FI 247
Query: 107 VQIRNWFDYRNHICIVFEKLGSS-----LYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           V +   F+ +  +C+V   +        +Y+    N     P  +      Q++  +  +
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF--YTAQIVSGLEHL 305
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +I+ DLKPENVLL     +++ D   ++             K+   K   +  T  
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP- 353
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLAM 280
                        + APE++LG  + +  D +++G  L E+      F+   E +E+  +
Sbjct: 354 ------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
Query: 281 MERVL 285
            +RVL
Sbjct: 402 KQRVL 406

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 47/237 (19%)
Query: 51  MGEGTFGQVLEC----WDRERKEM-VAIKIVRGIK--KYREAAMIEIEVLQQLAKHDK-- 101
           +G G FG+V+E       +E   + VA+K+++       +EA M E++++  L +H+   
Sbjct: 39  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 102 -------GGNRCVQIRNWFDYRNHICIVFEK----LGSSLY-----DFLRKNNYRSFPID 145
                   G   + I  +  Y + +  +  K    LG SL      + L K + R   + 
Sbjct: 99  NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 146 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 205
            +   + Q+ + +AF+     IH D+   NVLL +    K+ D+  +     DS+Y  + 
Sbjct: 159 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 218
Query: 206 PKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
                +K                      + APE I    +T   D+WS G +L E+
Sbjct: 219 NARLPVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEI 253

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 41/254 (16%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+V+    +   E+ A+KI++     +    E  M+E  VL    K        
Sbjct: 28  LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP----FL 83
Query: 107 VQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRS-FPIDLVREIARQLLECIAFMHD 163
            Q+ + F   + +  V E +  G  +Y   +   ++    +    EIA  L     F+  
Sbjct: 84  TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF----FLQS 139
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             +I+ DLK +NV+L S  +IK+ D+        D                  G TT   
Sbjct: 140 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD------------------GVTT--- 178
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-AMME 282
                   T  Y APE+I    +    D W+ G +L E+  G+A F+  +  E   ++ME
Sbjct: 179 ---KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 235
Query: 283 RVLGPLPQHMLKRV 296
             +   P+ M K  
Sbjct: 236 HNVA-YPKSMSKEA 248

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 45  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 103
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 161
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 162 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 208
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 209 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 249

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 45/245 (18%)
Query: 47  IHSKMGEGTFGQVLEC-WDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           +  ++G G+FG V +  W  +    VA+K   +     +  +A   E+ VL++       
Sbjct: 40  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 88
Query: 103 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 89  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 146
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   +IH DLK  N+ L     +K+ D+  +    + S                 GS 
Sbjct: 147 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----------------GSH 189
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 276
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 190 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 244
Query: 277 HLAMM 281
            +  M
Sbjct: 245 QIIFM 249

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 36/238 (15%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHD 100
           ++   +G G FG V           VAIK V    I  + E      + +EV+  L K  
Sbjct: 7   QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVS 65
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
            G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +
Sbjct: 66  SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAV 123
Query: 159 AFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
              H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF 
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFD 170
Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            T    P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 216

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 45/245 (18%)
Query: 47  IHSKMGEGTFGQVLEC-WDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           +  ++G G+FG V +  W  +    VA+K   +     +  +A   E+ VL++       
Sbjct: 32  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 80
Query: 103 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 81  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 138
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   +IH DLK  N+ L     +K+ D+  +    + S                 GS 
Sbjct: 139 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----------------GSH 181
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 276
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 182 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 236
Query: 277 HLAMM 281
            +  M
Sbjct: 237 QIIFM 241

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 59  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 117
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 175
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 176 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 222
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 223 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 263

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 36/238 (15%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHD 100
           ++   +G G FG V           VAIK V    I  + E      + +EV+  L K  
Sbjct: 7   QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVS 65
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
            G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +
Sbjct: 66  SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAV 123
Query: 159 AFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
              H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF 
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFD 170
Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            T    P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 216

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 17  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 75
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 76  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 133
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 134 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 180
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 181 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 221

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 32  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 90
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 91  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 148
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 149 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 195
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 196 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 236

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 32  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 90
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 91  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 148
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 149 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 195
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 196 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 236

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 16  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 74
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 75  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 132
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 133 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 179
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 180 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 220

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 31  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 89
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 90  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 147
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 148 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 194
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 195 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 235

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 32  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 90
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 91  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 148
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 149 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 195
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 196 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 236

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 28/229 (12%)
Query: 40  FSAFADKIHS--KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA 97
           F   AD +    ++G G +G V +       +++A+K +R     +E   + +++   + 
Sbjct: 46  FEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 105
Query: 98  KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLL 155
             D      V           + I  E + +SL  F ++  +  ++ P D++ +IA  ++
Sbjct: 106 TVD--CPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 163
Query: 156 ECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
           + +  +H  L +IH D+KP NVL+ +   +K+ D+  S +              S  K I
Sbjct: 164 KALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL-----------VDSVAKTI 212
Query: 215 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 263
           D G   Y  P+          R    +   G++   DIWS+G  ++EL 
Sbjct: 213 DAGCKPYMAPE----------RINPELNQKGYSVKSDIWSLGITMIELA 251

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 17  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 75
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 76  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 133
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 134 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 180
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 181 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 221

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 102/245 (41%), Gaps = 41/245 (16%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 106
           +G G FG+V  C  +   ++ A K +   +  +    + AM+E ++L ++  H +     
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV--HSR---FI 247
Query: 107 VQIRNWFDYRNHICIVFEKLGSS-----LYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           V +   F+ +  +C+V   +        +Y+    N     P  +      Q++  +  +
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF--YTAQIVSGLEHL 305
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +I+ DLKPENVLL     +++ D   ++             K+   K   +  T  
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP- 353
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLAM 280
                        + APE++LG  + +  D +++G  L E+      F+   E +E+  +
Sbjct: 354 ------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
Query: 281 MERVL 285
            +RVL
Sbjct: 402 KQRVL 406

>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 44/252 (17%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++GEG+FG + E  +    + VAIK         E    +   L+   +  K    
Sbjct: 13  KVGRRIGEGSFGVIFEGTNLLNNQQVAIKF--------EPRRSDAPQLRDEYRTYKLLAG 64
Query: 106 CVQIRNWFDYRN---HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
           C  I N + +     H  +V + LG SL D L     R F +  V   A+Q+L  +  +H
Sbjct: 65  CTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIH 123
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
           +  +++ D+KP+N L      I  P+ K+                ++ I V+DFG   + 
Sbjct: 124 EKSLVYRDIKPDNFL------IGRPNSKN----------------ANMIYVVDFGMVKFY 161
Query: 223 RP----------DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
           R           ++  +  T  Y +    LG   +   D+ ++G + +    G   +Q  
Sbjct: 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 221
Query: 273 ENLEHLAMMERV 284
           +   +    ER+
Sbjct: 222 KAATNKQKYERI 233

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 17  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 75
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 76  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 133
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 134 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 180
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 181 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 221

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 31  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 89
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 90  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 147
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 148 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 194
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 195 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 235

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 94/233 (40%), Gaps = 48/233 (20%)
Query: 51  MGEGTFGQVLEC----WDRERKEM-VAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGG 103
           +G G FG+V+E       +E   + VA+K+++       +EA M E++++  L +H+   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 104 NRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIAR---------- 152
              V +     +   + ++ E      L +FLR+ + R    D    IA           
Sbjct: 111 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS-RVLETDPAFAIANSTASTRDLLH 168
Query: 153 ---QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 209
              Q+ + +AF+     IH D+   NVLL +    K+ D+  +     DS+Y  +     
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 210 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
            +K                      + APE I    +T   D+WS G +L E+
Sbjct: 229 PVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEI 259

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 94/233 (40%), Gaps = 48/233 (20%)
Query: 51  MGEGTFGQVLEC----WDRERKEM-VAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGG 103
           +G G FG+V+E       +E   + VA+K+++       +EA M E++++  L +H+   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 104 NRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIAR---------- 152
              V +     +   + ++ E      L +FLR+ + R    D    IA           
Sbjct: 111 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS-RVLETDPAFAIANSTLSTRDLLH 168
Query: 153 ---QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 209
              Q+ + +AF+     IH D+   NVLL +    K+ D+  +     DS+Y  +     
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 210 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
            +K                      + APE I    +T   D+WS G +L E+
Sbjct: 229 PVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEI 259

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQLAKHDKGGNR 105
           +G G FG V           VAIK V    I  + E      + +EV+  L K   G + 
Sbjct: 15  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL-LKKVSSGFSG 73
Query: 106 CVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+
Sbjct: 74  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 131
Query: 164 LCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
             ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y             DF  T   
Sbjct: 132 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY------------TDFDGTRVY 178
Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
            P +       H R+  V            WS+G +L ++  G+  F+  E +
Sbjct: 179 SPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHDEEI 219

>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 44/252 (17%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++GEG+FG + E  +    + VAIK         E    +   L+   +  K    
Sbjct: 12  KVGRRIGEGSFGVIFEGTNLLNNQQVAIKF--------EPRRSDAPQLRDEYRTYKLLAG 63
Query: 106 CVQIRNWFDYRN---HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
           C  I N + +     H  +V + LG SL D L     R F +  V   A+Q+L  +  +H
Sbjct: 64  CTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIH 122
Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
           +  +++ D+KP+N L      I  P+ K+                ++ I V+DFG   + 
Sbjct: 123 EKSLVYRDIKPDNFL------IGRPNSKN----------------ANMIYVVDFGMVKFY 160
Query: 223 RP----------DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
           R           ++  +  T  Y +    LG   +   D+ ++G + +    G   +Q  
Sbjct: 161 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 220
Query: 273 ENLEHLAMMERV 284
           +   +    ER+
Sbjct: 221 KAATNKQKYERI 232

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 45/245 (18%)
Query: 47  IHSKMGEGTFGQVLEC-WDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           +  ++G G+FG V +  W  +    VA+K   +     +  +A   E+ VL++       
Sbjct: 12  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 60
Query: 103 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 61  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 118
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   +IH DLK  N+ L     +K+ D+  +    + S                 GS 
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----------------GSH 161
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 276
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 162 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 216
Query: 277 HLAMM 281
            +  M
Sbjct: 217 QIIFM 221

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 45/245 (18%)
Query: 47  IHSKMGEGTFGQVLEC-WDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           +  ++G G+FG V +  W  +    VA+K   +     +  +A   E+ VL++       
Sbjct: 39  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 87
Query: 103 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 88  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 145
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   +IH DLK  N+ L     +K+ D+                   + +K    GS 
Sbjct: 146 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDF-----------------GLATVKSRWSGSH 188
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 276
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 189 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 243
Query: 277 HLAMM 281
            +  M
Sbjct: 244 QIIFM 248

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 45/245 (18%)
Query: 47  IHSKMGEGTFGQVLEC-WDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           +  ++G G+FG V +  W  +    VA+K   +     +  +A   E+ VL++       
Sbjct: 40  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 88
Query: 103 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 89  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 146
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   +IH DLK  N+ L     +K+ D+                   + +K    GS 
Sbjct: 147 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDF-----------------GLATVKSRWSGSH 189
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 276
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 190 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 244
Query: 277 HLAMM 281
            +  M
Sbjct: 245 QIIFM 249

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 32/239 (13%)
Query: 50  KMGEGTFGQVLECWDRERKEM--VAIKIVR-GIKKY-REAAMIEIEVLQQLAKHDKGGNR 105
           ++G G FG V +   R RK+   VAIK+++ G +K   E  M E +++ QL         
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-----DNPY 397
Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            V++         + ++    G  L+ FL        P+  V E+  Q+   + ++ +  
Sbjct: 398 IVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKN 456
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
            +H +L   NVLLV+  Y K+ D+  S     D SY+                +  + P 
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT-------------ARSAGKWPL 503
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLAMMER 283
           + Y        APE I    ++   D+WS G  + E L  G+  ++  +  E +A +E+
Sbjct: 504 KWY--------APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 554

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 41/254 (16%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+V+    +   E+ A+KI++     +    E  M+E  VL    K        
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP----FL 404
Query: 107 VQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRS-FPIDLVREIARQLLECIAFMHD 163
            Q+ + F   + +  V E +  G  +Y   +   ++    +    EIA  L     F+  
Sbjct: 405 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF----FLQS 460
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             +I+ DLK +NV+L S  +IK+ D+        D                  G TT   
Sbjct: 461 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD------------------GVTT--- 499
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-AMME 282
                   T  Y APE+I    +    D W+ G +L E+  G+A F+  +  E   ++ME
Sbjct: 500 ---KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
Query: 283 RVLGPLPQHMLKRV 296
             +   P+ M K  
Sbjct: 557 HNVA-YPKSMSKEA 569

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 32/245 (13%)
Query: 46  KIHSKMGEGTFGQVLEC---WDRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHD 100
           KI   +G G FG+V         +R+  VAIK ++    +K R   + E  ++ Q    +
Sbjct: 36  KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 95
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +         + I+ E +   SL  FLR+N+ +   I LV  + R +   + 
Sbjct: 96  -----VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVG-MLRGIAAGMK 149
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++ D+  +H DL   N+L+ S+   KV D+  S     D+S                   
Sbjct: 150 YLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS-----------------DP 192
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHL 278
           TY       I     + APE I    +T   D+WS G ++ E+ + GE  +    N + +
Sbjct: 193 TYTSALGGKI--PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI 250
Query: 279 AMMER 283
             +E+
Sbjct: 251 NAIEQ 255

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 45/245 (18%)
Query: 47  IHSKMGEGTFGQVLEC-WDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           +  ++G G+FG V +  W  +    VA+K   +     +  +A   E+ VL++       
Sbjct: 17  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 65
Query: 103 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 66  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 123
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   +IH DLK  N+ L     +K+ D+                   + +K    GS 
Sbjct: 124 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDF-----------------GLATVKSRWSGSH 166
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 276
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 167 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 221
Query: 277 HLAMM 281
            +  M
Sbjct: 222 QIIFM 226

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 95/217 (43%), Gaps = 26/217 (11%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           ++G G +G V +       +++A+K +R     +E   + +++   ++         V  
Sbjct: 14  ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDL--DISMRTVDCPFTVTF 71
Query: 110 RNWFDYRNHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHD-LCM 166
                    + I  E + +SL  F ++  +  ++ P D++ +IA  +++ +  +H  L +
Sbjct: 72  YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           IH D+KP NVL+ +   +K+ D+  S +   D +           K ID G   Y  P+ 
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA-----------KDIDAGCKPYMAPE- 179
Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 263
                    R    +   G++   DIWS+G  ++EL 
Sbjct: 180 ---------RINPELNQKGYSVKSDIWSLGITMIELA 207

>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1 Length = 330

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++  K+G G FG++    +    E VAIK+   +K       +E    +QL      G+ 
Sbjct: 12  RVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPMKSRAPQLHLEYRFYKQLGS----GDG 66
Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             Q+  +     +  +V E LG SL D     + R+F +  V  IA QL+  + ++H   
Sbjct: 67  IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSKN 125
Query: 166 MIHTDLKPENVLL 178
           +I+ D+KPEN L+
Sbjct: 126 LIYRDVKPENFLI 138

>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3 Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++  K+G G FG++    +    E VAIK+   +K       +E    +QL      G+ 
Sbjct: 33  RVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPMKSRAPQLHLEYRFYKQLGS----GDG 87
Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             Q+  +     +  +V E LG SL D     + R+F +  V  IA QL+  + ++H   
Sbjct: 88  IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSKN 146
Query: 166 MIHTDLKPENVLL 178
           +I+ D+KPEN L+
Sbjct: 147 LIYRDVKPENFLI 159

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 45/245 (18%)
Query: 47  IHSKMGEGTFGQVLEC-WDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           +  ++G G+FG V +  W  +    VA+K   +     +  +A   E+ VL++       
Sbjct: 14  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 62
Query: 103 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 63  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 120
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   +IH DLK  N+ L     +K+ D+                   + +K    GS 
Sbjct: 121 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDF-----------------GLATVKSRWSGSH 163
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 276
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 164 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 218
Query: 277 HLAMM 281
            +  M
Sbjct: 219 QIIFM 223

>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With Inhibitor Length = 330

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++  K+G G FG++    +    E VAIK+   +K       +E    +QL      G+ 
Sbjct: 12  RVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPMKSRAPQLHLEYRFYKQLG----SGDG 66
Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             Q+  +     +  +V E LG SL D     + R+F +  V  IA QL+  + ++H   
Sbjct: 67  IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSKN 125
Query: 166 MIHTDLKPENVLL 178
           +I+ D+KPEN L+
Sbjct: 126 LIYRDVKPENFLI 138

>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2 Length = 313

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++  K+G G FG++    +    E VAIK+   IK       +E    +QL+  +     
Sbjct: 7   RVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPIKSRAPQLHLEYRFYKQLSATEG---- 61
Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
             Q+  +     +  +V E LG SL D     + R+F +  V  IA QL+  + ++H   
Sbjct: 62  VPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLITRMEYVHTKS 120
Query: 166 MIHTDLKPENVLL 178
           +I+ D+KPEN L+
Sbjct: 121 LIYRDVKPENFLV 133

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 104/253 (41%), Gaps = 36/253 (14%)
Query: 51  MGEGTFGQVL---ECWDRERKEMVAIKIVRGIKKYREAAMIE-IEVLQQLAKHDKGGNRC 106
           +G G +G+V    +    +  ++ A+K+++     ++A   E     +Q+ +H +     
Sbjct: 62  LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
           V +   F     + ++ + + G  L+  L +     F    V+    +++  +  +H L 
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLG 179
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ D+K EN+LL S+ ++ + D+  S          K        +  DF         
Sbjct: 180 IIYRDIKLENILLDSNGHVVLTDFGLS----------KEFVADETERAYDF--------- 220
Query: 226 QNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLAMME 282
                 T  Y AP+++ G   G     D WS+G ++ EL TG + F    E      +  
Sbjct: 221 ----CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR 276
Query: 283 RVLG---PLPQHM 292
           R+L    P PQ M
Sbjct: 277 RILKSEPPYPQEM 289

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 45/245 (18%)
Query: 47  IHSKMGEGTFGQVLEC-WDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           +  ++G G+FG V +  W  +    VA+K   +     +  +A   E+ VL++       
Sbjct: 17  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 65
Query: 103 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 66  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 123
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   +IH DLK  N+ L     +K+ D+                   + +K    GS 
Sbjct: 124 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDF-----------------GLATVKSRWSGSH 166
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 276
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 167 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 221
Query: 277 HLAMM 281
            +  M
Sbjct: 222 QIIFM 226

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 24/99 (24%)
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           ++H DLKP NV L   + +K+ D+  +     D  + K                      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKE--------------------- 175
Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
               V T +Y +PE +  + +    DIWS+GC+L ELC 
Sbjct: 176 ---FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 16  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 74
Query: 101 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
                 V+ +   +   R ++ ++ E L   SL D+L+ +  R   I L+ +   Q+ + 
Sbjct: 75  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLL-QYTSQICKG 129
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 216
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 184
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                             + APE +    ++   D+WS G +L EL T
Sbjct: 185 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 45/245 (18%)
Query: 47  IHSKMGEGTFGQVLEC-WDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           +  ++G G+FG V +  W  +    VA+K   +     +  +A   E+ VL++       
Sbjct: 12  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 60
Query: 103 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 61  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 118
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   +IH DLK  N+ L     +K+ D+                   + +K    GS 
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDF-----------------GLATVKSRWSGSH 161
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 276
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 162 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 216
Query: 277 HLAMM 281
            +  M
Sbjct: 217 QIIFM 221

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 16  KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 74
Query: 101 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
                 V+ +   +   R ++ ++ E L   SL ++L+K+  R   I L+ +   Q+ + 
Sbjct: 75  N----IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLL-QYTSQICKG 129
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 216
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 184
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                             + APE +    ++   D+WS G +L EL T
Sbjct: 185 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 45/245 (18%)
Query: 47  IHSKMGEGTFGQVLEC-WDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKG 102
           +  ++G G+FG V +  W  +    VA+K   +     +  +A   E+ VL++       
Sbjct: 12  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 60
Query: 103 GNRCVQIRNWFDYRN--HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
             R V I  +  Y     + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 61  -TRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 118
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   +IH DLK  N+ L     +K+ D+                   + +K    GS 
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDF-----------------GLATVKSRWSGSH 161
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 276
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 162 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 216
Query: 277 HLAMM 281
            +  M
Sbjct: 217 QIIFM 221

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 43/227 (18%)
Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEI---EVLQQLAKHDKGGNR 105
           +K GEG FG V + +       VA+K        + AAM++I   E+ QQ  +  K   +
Sbjct: 28  NKXGEGGFGVVYKGY--VNNTTVAVK--------KLAAMVDITTEELKQQFDQEIKVXAK 77
Query: 106 C-----VQIRNWFDYRNHICIVF-EKLGSSLYDFLR-KNNYRSFPIDLVREIARQLLECI 158
           C     V++  +    + +C+V+      SL D L   +           +IA+     I
Sbjct: 78  CQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGI 137
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            F+H+   IH D+K  N+LL  +   K+ D+  +    + S  F +    S         
Sbjct: 138 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLA----RASEKFAQXVXXS--------- 184
Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 265
                     IV T  Y APE + G   T   DI+S G +L+E+ TG
Sbjct: 185 ---------RIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITG 221

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 51/241 (21%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQLAK 98
           K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +  
Sbjct: 32  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 91
Query: 99  HDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLR-KNN----YRSFPIDLVREI 150
           H    N    C +          + + F K G+ L  +LR K N    Y+  P DL ++ 
Sbjct: 92  HLNVVNLLGACTKPGGPL----MVIVEFCKFGN-LSTYLRSKRNEFVPYKEAPEDLYKDF 146
Query: 151 ---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 201
                    + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD  Y
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 206
Query: 202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 261
            ++      +K                      + APE I    +T   D+WS G +L E
Sbjct: 207 VRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 244
Query: 262 L 262
           +
Sbjct: 245 I 245

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 31/121 (25%)
Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKV 213
            +  +H   +I+ DLKPEN++L    ++K+ D+   K S+H                   
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD------------------ 174
Query: 214 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
              G+ T+          T  Y APE+++  G     D WS+G ++ ++ TG   F T E
Sbjct: 175 ---GTVTH------XFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGE 224
Query: 274 N 274
           N
Sbjct: 225 N 225

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 49  SKMGEGTFGQVLEC----WDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKG 102
           S++G+G FG V  C           +VA+K ++  G  + R+    EI++L+ L      
Sbjct: 16  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR-EIQILKALHSDFIV 74
Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREI--ARQLLECIA 159
             R V   ++   R  + +V E L S  L DFL+++  R   +D  R +  + Q+ + + 
Sbjct: 75  KYRGV---SYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGME 128
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++     +H DL   N+L+ S  ++K+ D+  +   P D  Y+                 
Sbjct: 129 YLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY----------------- 171
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
               P Q+ I     + APE +    ++   D+WS G +L EL T
Sbjct: 172 VVREPGQSPIF----WYAPESLSDNIFSRQSDVWSFGVVLYELFT 212

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 31/121 (25%)
Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKV 213
            +  +H   +I+ DLKPEN++L    ++K+ D+   K S+H                   
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD------------------ 174
Query: 214 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
              G+ T+          T  Y APE+++  G     D WS+G ++ ++ TG   F T E
Sbjct: 175 ---GTVTHT------FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGE 224
Query: 274 N 274
           N
Sbjct: 225 N 225

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKH 99
           K  S++G+G FG V  C           +VA+K ++  G  + R+    EI++L+ L   
Sbjct: 26  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR-EIQILKALHSD 84
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREI--ARQLLE 156
                R V   ++   R  + +V E L S  L DFL+++  R   +D  R +  + Q+ +
Sbjct: 85  FIVKYRGV---SYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICK 138
Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + ++     +H DL   N+L+ S  ++K+ D+  +   P D  Y+              
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY-------------- 184
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                  P Q+ I     + APE +    ++   D+WS G +L EL T
Sbjct: 185 ---VVREPGQSPIF----WYAPESLSDNIFSRQSDVWSFGVVLYELFT 225

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 51/241 (21%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQLAK 98
           K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +  
Sbjct: 67  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 126
Query: 99  HDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLR-KNN----YRSFPIDLVREI 150
           H    N    C +          + + F K G+ L  +LR K N    Y+  P DL ++ 
Sbjct: 127 HLNVVNLLGACTKPGGPL----MVIVEFCKFGN-LSTYLRSKRNEFVPYKVAPEDLYKDF 181
Query: 151 ---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 201
                    + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD  Y
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 241
Query: 202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 261
            ++      +K                      + APE I    +T   D+WS G +L E
Sbjct: 242 VRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 279
Query: 262 L 262
           +
Sbjct: 280 I 280

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 109/253 (43%), Gaps = 45/253 (17%)
Query: 51  MGEGTFGQVLEC-WDRE---RKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHD--KG 102
           +GEG FG+V  C +D E     E VA+K ++        A +  EIE+L+ L   +  K 
Sbjct: 17  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREI--ARQLLECIA 159
              C +     D  N I ++ E L S SL ++L KN  +   I+L +++  A Q+ + + 
Sbjct: 77  KGICTE-----DGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMD 128
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++     +H DL   NVL+ S   +K+ D+  +                 AI+      T
Sbjct: 129 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT----------------KAIETDKEXXT 172
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
             +  D     S   + APE ++   +    D+WS G  L EL T         +   +A
Sbjct: 173 VKDDRD-----SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT-----YCDSDSSPMA 222
Query: 280 MMERVLGPLPQHM 292
           +  +++GP    M
Sbjct: 223 LFLKMIGPTHGQM 235

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 49/255 (19%)
Query: 51  MGEGTFGQVLEC-WDRE---RKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHD--KG 102
           +GEG FG+V  C +D E     E VA+K ++        A +  EIE+L+ L   +  K 
Sbjct: 29  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREI--ARQLLECIA 159
              C +     D  N I ++ E L S SL ++L KN  +   I+L +++  A Q+ + + 
Sbjct: 89  KGICTE-----DGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMD 140
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           ++     +H DL   NVL+ S   +K+ D+    ++ T K+    K           D  
Sbjct: 141 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKD----------DRD 190
Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
           S  +             + APE ++   +    D+WS G  L EL T         +   
Sbjct: 191 SPVF-------------WYAPECLMQSKFYIASDVWSFGVTLHELLT-----YCDSDSSP 232
Query: 278 LAMMERVLGPLPQHM 292
           +A+  +++GP    M
Sbjct: 233 MALFLKMIGPTHGQM 247

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 37/228 (16%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKH 99
           K  S++G+G FG V  C           +VA+K ++  G  + R+    EI++L+ L   
Sbjct: 14  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR-EIQILKALHSD 72
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREI--ARQLLE 156
                R V   ++   R  + +V E L S  L DFL+++  R   +D  R +  + Q+ +
Sbjct: 73  FIVKYRGV---SYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICK 126
Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + ++     +H DL   N+L+ S  ++K+ D+  +   P D  Y+              
Sbjct: 127 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY-------------- 172
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                  P Q+ I     + APE +    ++   D+WS G +L EL T
Sbjct: 173 ---VVREPGQSPIF----WYAPESLSDNIFSRQSDVWSFGVVLYELFT 213

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 51/241 (21%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQLAK 98
           K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +  
Sbjct: 30  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 99  HDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLR-KNN----YRSFPIDLVREI 150
           H    N    C +          + + F K G+ L  +LR K N    Y+  P DL ++ 
Sbjct: 90  HLNVVNLLGACTKPGGPL----MVIVEFCKFGN-LSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 151 ---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 201
                    + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD  Y
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 204
Query: 202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 261
            ++      +K                      + APE I    +T   D+WS G +L E
Sbjct: 205 VRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 262 L 262
           +
Sbjct: 243 I 243

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 44/233 (18%)
Query: 51  MGEGTFGQVLECWDRE---RKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHDKGGNR 105
           +GEG++G+V E  D E   R+ +  +K  +  +     A +  EI++L++L +H      
Sbjct: 13  LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RH----KN 67
Query: 106 CVQIRN--WFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            +Q+ +  + + +  + +V E     + + L     + FP+        QL++ + ++H 
Sbjct: 68  VIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS 127
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID----FGST 219
             ++H D+KP N+LL +   +K+                      SA+ V +    F + 
Sbjct: 128 QGIVHKDIKPGNLLLTTGGTLKI----------------------SALGVAEALHPFAAD 165
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGW--TYPCDIWSVGCILVELCTGEALFQ 270
              R  Q     +  ++ PE+  GL     +  DIWS G  L  + TG   F+
Sbjct: 166 DTCRTSQG----SPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 74
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 75  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 177
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 178 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 282 ERVLG 286
           ER  G
Sbjct: 232 ERPEG 236

>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/250 (22%), Positives = 103/250 (41%), Gaps = 42/250 (16%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++  K+G G+FG +    +    E VAIK+     +  +    ++ +  +  K  +GG  
Sbjct: 12  RLGRKIGSGSFGDIYLGANIASGEEVAIKL-----ECVKTKHPQLHIESKFYKMMQGGVG 66
Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
              I+      ++  +V E LG SL D     + R F +  V  +A Q++  I ++H   
Sbjct: 67  IPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKN 125
Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-------S 218
            IH D+KP+N L+   +                        K + + +IDFG       +
Sbjct: 126 FIHRDVKPDNFLMGLGK------------------------KGNLVYIIDFGLAKKYRDA 161
Query: 219 TTYE----RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
            T++    R ++N +  T  Y +    LG+  +   D+ S+G +L+    G   +Q  + 
Sbjct: 162 RTHQHIPYRENKN-LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA 220
Query: 275 LEHLAMMERV 284
                  ER+
Sbjct: 221 ATKRQKYERI 230

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 87/238 (36%), Gaps = 54/238 (22%)
Query: 51  MGEGTFGQVLECW-----DRERKEMVAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGG 103
           +G G FG+V+E         +    VA+K+++       REA M E++VL  L  H    
Sbjct: 54  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 104 N---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLVR------- 148
           N    C           + C         L +FLR+        ++ P  +         
Sbjct: 114 NLLGACTIGGPTLVITEYCCY------GDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 149 ----EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 204
                 + Q+ + +AF+     IH DL   N+LL      K+ D+  + H   DS+Y  +
Sbjct: 168 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 205 MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
                 +K                      + APE I    +T+  D+WS G  L EL
Sbjct: 228 GNARLPVK----------------------WMAPESIFNCVYTFESDVWSYGIFLWEL 263

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 95/241 (39%), Gaps = 51/241 (21%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQLAK 98
           K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +  
Sbjct: 21  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 80
Query: 99  HDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLR-KNN----YRSFPIDLVREI 150
           H    N    C +           C    K G+ L  +LR K N    Y+  P DL ++ 
Sbjct: 81  HLNVVNLLGACTKPGGPLMVITEFC----KFGN-LSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 151 ---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 201
                    + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD  Y
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 261
            ++      +K                      + APE I    +T   D+WS G +L E
Sbjct: 196 VRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 262 L 262
           +
Sbjct: 234 I 234

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 48/234 (20%)
Query: 51  MGEGTFGQVLEC----WDRERKEM-VAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGG 103
           +G G FG+V+E       +E   + VA+K+++       +EA M E++++  L +H+   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 104 NRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKN-----NYRSFPIDLVRE-------- 149
              V +     +   + ++ E      L +FLR+       Y   P     E        
Sbjct: 111 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 150 -IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
             + Q+ + +AF+     IH D+   NVLL +    K+ D+  +     DS+Y  +    
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 229
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
             +K                      + APE I    +T   D+WS G +L E+
Sbjct: 230 LPVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEI 261

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 34/142 (23%)
Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
           E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                      
Sbjct: 111 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS--------------------- 149
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE- 261
                 DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ E 
Sbjct: 150 ------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 203
Query: 262 LCTGEALFQTHENLEHLAMMER 283
              G+  ++  +  E  AM+E+
Sbjct: 204 FSYGQKPYRGMKGSEVTAMLEK 225

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 34/142 (23%)
Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
           E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                      
Sbjct: 109 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS--------------------- 147
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE- 261
                 DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ E 
Sbjct: 148 ------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 201
Query: 262 LCTGEALFQTHENLEHLAMMER 283
              G+  ++  +  E  AM+E+
Sbjct: 202 FSYGQKPYRGMKGSEVTAMLEK 223

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 47  IHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKH 99
           I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ Q    
Sbjct: 49  IDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           +      +++         + IV E +   SL  FLRK++ +   I LV  + R +   +
Sbjct: 107 N-----IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG-MLRGIASGM 160
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDF 216
            ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K         
Sbjct: 161 KYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK--------- 211
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                        +  R + +PE I    +T   D+WS G +L E+ +
Sbjct: 212 -------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 34/142 (23%)
Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
           E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                      
Sbjct: 115 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS--------------------- 153
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE- 261
                 DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ E 
Sbjct: 154 ------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 207
Query: 262 LCTGEALFQTHENLEHLAMMER 283
              G+  ++  +  E  AM+E+
Sbjct: 208 FSYGQKPYRGMKGSEVTAMLEK 229

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 34/142 (23%)
Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
           E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                      
Sbjct: 121 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS--------------------- 159
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE- 261
                 DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ E 
Sbjct: 160 ------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 213
Query: 262 LCTGEALFQTHENLEHLAMMER 283
              G+  ++  +  E  AM+E+
Sbjct: 214 FSYGQKPYRGMKGSEVTAMLEK 235

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 74
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 75  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 177
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 178 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 282 ERVLG 286
           ER  G
Sbjct: 232 ERPEG 236

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 79
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 80  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 182
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 183 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
Query: 282 ERVLG 286
           ER  G
Sbjct: 237 ERPEG 241

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 26/176 (14%)
Query: 140 RSFPIDLVREIA--RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK 197
           R  P+   R +A  RQ+   +   H     H D+KPEN+L+ + ++  + D+  +  T  
Sbjct: 127 RQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTD 186
Query: 198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC 257
           +             K+   G+T          V T +Y APE       TY  DI+++ C
Sbjct: 187 E-------------KLTQLGNT----------VGTLYYXAPERFSESHATYRADIYALTC 223
Query: 258 ILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE 313
           +L E  TG   +Q  +     A + + + P P  +   +    +  + RG    PE
Sbjct: 224 VLYECLTGSPPYQGDQLSVXGAHINQAI-PRPSTVRPGIPVAFDAVIARGXAKNPE 278

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 34/142 (23%)
Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
           E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                      
Sbjct: 474 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS--------------------- 512
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE- 261
                 DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ E 
Sbjct: 513 ------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 566
Query: 262 LCTGEALFQTHENLEHLAMMER 283
              G+  ++  +  E  AM+E+
Sbjct: 567 FSYGQKPYRGMKGSEVTAMLEK 588

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 34/142 (23%)
Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
           E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                      
Sbjct: 473 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS--------------------- 511
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE- 261
                 DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ E 
Sbjct: 512 ------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 565
Query: 262 LCTGEALFQTHENLEHLAMMER 283
              G+  ++  +  E  AM+E+
Sbjct: 566 FSYGQKPYRGMKGSEVTAMLEK 587

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 95/241 (39%), Gaps = 51/241 (21%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQLAK 98
           K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +  
Sbjct: 21  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 80
Query: 99  HDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLR-KNN----YRSFPIDLVREI 150
           H    N    C +           C    K G+ L  +LR K N    Y+  P DL ++ 
Sbjct: 81  HLNVVNLLGACTKPGGPLMVITEFC----KFGN-LSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 151 ---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 201
                    + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD  Y
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 261
            ++      +K                      + APE I    +T   D+WS G +L E
Sbjct: 196 VRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 262 L 262
           +
Sbjct: 234 I 234

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 37/219 (16%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+   +G+G FG V+      R   VA+K ++      +A + E  V+ QL +H    + 
Sbjct: 15  KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 66
Query: 106 CVQIRNWF-DYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            VQ+     + +  + IV E +   SL D+LR         D + + +  + E + ++  
Sbjct: 67  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              +H DL   NVL+                            + +  KV DFG T    
Sbjct: 127 NNFVHRDLAARNVLV---------------------------SEDNVAKVSDFGLTKEAS 159
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
             Q+       + APE +    ++   D+WS G +L E+
Sbjct: 160 STQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEI 198

>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 38/162 (23%)
Query: 107 VQIRNWFDYRNHIC-----IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           VQI N+ ++ +        IV E +G      L+++  +  P+        ++L  ++++
Sbjct: 142 VQIFNFVEHTDRHGDPVGYIVMEYVGGQ---SLKRSKGQKLPVAEAIAYLLEILPALSYL 198
Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H + +++ DLKPEN++L   +                            +K+ID G+ + 
Sbjct: 199 HSIGLVYNDLKPENIMLTEEQ----------------------------LKLIDLGAVSR 230
Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 263
                 Y+  T  ++APE++   G T   DI++VG  L  L 
Sbjct: 231 IN-SFGYLYGTPGFQAPEIVR-TGPTVATDIYTVGRTLAALT 270

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 79
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 182
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 183 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
Query: 282 ERVLG 286
           ER  G
Sbjct: 237 ERPEG 241

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 51/236 (21%)
Query: 50  KMGEGTFGQVL--ECWD---RERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHD--- 100
           ++GEG FG+V   EC++    + K +VA+K ++      R+    E E+L  L +H+   
Sbjct: 20  ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIV 78
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSF-------PIDLVRE--- 149
           K    CV+        + + +VFE +    L  FLR +   +        P +L +    
Sbjct: 79  KFYGVCVE-------GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 150 -IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
            IA+Q+   + ++     +H DL   N L+  +  +K+ D+  S                
Sbjct: 132 HIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR--------------- 176
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                 D  ST Y R   + ++  R +  PE I+   +T   D+WS+G +L E+ T
Sbjct: 177 ------DVYSTDYYRVGGHTMLPIR-WMPPESIMYRKFTTESDVWSLGVVLWEIFT 225

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 34/142 (23%)
Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
           E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                      
Sbjct: 129 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS--------------------- 167
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE- 261
                 DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ E 
Sbjct: 168 ------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 221
Query: 262 LCTGEALFQTHENLEHLAMMER 283
              G+  ++  +  E  AM+E+
Sbjct: 222 FSYGQKPYRGMKGSEVTAMLEK 243

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 74
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 177
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 178 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 282 ERVLG 286
           ER  G
Sbjct: 232 ERPEG 236

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 47  IHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKH 99
           I   +G G FG+V  C  R     +R+  VAIK ++    +K R   + E  ++ Q    
Sbjct: 26  IERVIGAGEFGEV--CSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 83
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           +      + +         + IV E +   SL  FL+KN+ +   I LV  + R +   +
Sbjct: 84  N-----IIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVG-MLRGISAGM 137
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDF 216
            ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K         
Sbjct: 138 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK--------- 188
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL 275
                        +  R + APE I    +T   D+WS G ++ E+ + GE  +    N 
Sbjct: 189 -------------IPIR-WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQ 234
Query: 276 EHLAMME 282
           + +  +E
Sbjct: 235 DVIKAVE 241

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 47  IHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKH 99
           I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ Q    
Sbjct: 49  IDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           +      +++         + IV E +   SL  FLRK++ +   I LV  + R +   +
Sbjct: 107 N-----IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG-MLRGIASGM 160
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDF 216
            ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K         
Sbjct: 161 KYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK--------- 211
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                        +  R + +PE I    +T   D+WS G +L E+ +
Sbjct: 212 -------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 34/142 (23%)
Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
           E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                      
Sbjct: 131 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS--------------------- 169
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE- 261
                 DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ E 
Sbjct: 170 ------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 223
Query: 262 LCTGEALFQTHENLEHLAMMER 283
              G+  ++  +  E  AM+E+
Sbjct: 224 FSYGQKPYRGMKGSEVTAMLEK 245

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 34/142 (23%)
Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
           E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                      
Sbjct: 131 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS--------------------- 169
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE- 261
                 DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ E 
Sbjct: 170 ------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 223
Query: 262 LCTGEALFQTHENLEHLAMMER 283
              G+  ++  +  E  AM+E+
Sbjct: 224 FSYGQKPYRGMKGSEVTAMLEK 245

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 74
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 177
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 178 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 282 ERVLG 286
           ER  G
Sbjct: 232 ERPEG 236

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 47  IHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKH 99
           I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ Q    
Sbjct: 49  IDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           +      +++         + IV E +   SL  FLRK++ +   I LV  + R +   +
Sbjct: 107 N-----IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG-MLRGIASGM 160
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDF 216
            ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K         
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK--------- 211
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                        +  R + +PE I    +T   D+WS G +L E+ +
Sbjct: 212 -------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 96  LAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQ 153
           L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q
Sbjct: 108 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQ 165
Query: 154 LLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           +LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y           
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY----------- 213
Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 272
             DF  T    P +       H R+  V            WS+G +L ++  G+  F+  
Sbjct: 214 -TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHD 260
Query: 273 ENL 275
           E +
Sbjct: 261 EEI 263

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 22  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 76
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 77  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DL   N L+  +  +KV D+  S     D+      P  +   +               
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAPAGAKFPI--------------- 178
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 179 -----KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
Query: 282 ERVLG 286
           ER  G
Sbjct: 234 ERPEG 238

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 92/234 (39%), Gaps = 47/234 (20%)
Query: 51  MGEGTFGQVLEC----WDR-ERKEMVAIKIVRGIKKYRE--AAMIEIEVLQQLAKHDKGG 103
           +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +  H    
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 104 N---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPI-DLVREI--------- 150
           N    C +          + + F K G+ L  +LR       P  DL ++          
Sbjct: 95  NLLGACTKPGGPL----MVIVEFCKFGN-LSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 151 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 210
           + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD  Y ++      
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 211 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
           +K                      + APE I    +T   D+WS G +L E+ +
Sbjct: 210 LK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 29/119 (24%)
Query: 146 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 205
           L  E+  Q+ + + ++H   +IH DLKP N+ LV ++ +K+                   
Sbjct: 137 LALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIG------------------ 178
Query: 206 PKSSAIKVIDFGSTTYERPDQNYIVS--TRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
                    DFG  T  + D     S  T  Y +PE I    +    D++++G IL EL
Sbjct: 179 ---------DFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 38/246 (15%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 21  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 75
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 76  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 169 TDLKPENVLLVSSEYIKVPDYK-SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
            DL   N L+  +  +KV D+  S L T                     G T        
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMT---------------------GDTXTAHAGAK 174
Query: 228 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAM 280
           + +    + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    
Sbjct: 175 FPIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR 231
Query: 281 MERVLG 286
           MER  G
Sbjct: 232 MERPEG 237

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 24  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 78
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 79  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 138
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 181
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 182 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 235
Query: 282 ERVLG 286
           ER  G
Sbjct: 236 ERPEG 240

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 21  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 75
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 76  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DL   N L+  +  +KV D+  S     D+      P  +   +               
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAPAGAKFPI--------------- 177
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 178 -----KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 232
Query: 282 ERVLG 286
           ER  G
Sbjct: 233 ERPEG 237

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 41/226 (18%)
Query: 47  IHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKH 99
           I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ Q    
Sbjct: 20  IDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           +      +++         + IV E +   SL  FLRK++ +   I LV  + R +   +
Sbjct: 78  N-----IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG-MLRGIASGM 131
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDF 216
            ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K         
Sbjct: 132 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK--------- 182
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
                        +  R + +PE I    +T   D+WS G +L E+
Sbjct: 183 -------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEV 214

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 79
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 182
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 183 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
Query: 282 ERVLG 286
           ER  G
Sbjct: 237 ERPEG 241

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 22  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 76
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 77  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 179
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 180 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
Query: 282 ERVLG 286
           ER  G
Sbjct: 234 ERPEG 238

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 36/247 (14%)
Query: 46  KIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAK 98
           KI   +G G FG+V  C  R     +++  VAIK ++G   ++ R   + E  ++ Q   
Sbjct: 19  KIEEVIGAGEFGEV--CRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEH 76
Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYD-FLRKNNYRSFPIDLVREIARQLLEC 157
            +      +++         + I+ E + +   D FLR N+ +   I LV  + R +   
Sbjct: 77  PN-----IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVG-MLRGIASG 130
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + ++ ++  +H DL   N+L+ S+   KV D+  S    ++S        S   +    G
Sbjct: 131 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS--------SDPTETSSLG 182
Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 276
                R           + APE I    +T   D WS G ++ E+ + GE  +    N +
Sbjct: 183 GKIPIR-----------WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD 231
Query: 277 HLAMMER 283
            +  +E+
Sbjct: 232 VINAIEQ 238

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 100/245 (40%), Gaps = 32/245 (13%)
Query: 46  KIHSKMGEGTFGQVLEC---WDRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHD 100
           KI   +G G FG+V         +R+  VAIK ++    +K R   + E  ++ Q    +
Sbjct: 10  KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 + +         + I+ E +   SL  FLR+N+ +   I LV  + R +   + 
Sbjct: 70  -----VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVG-MLRGIAAGMK 123
Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++ D+  +H  L   N+L+ S+   KV D+  S     D+S                   
Sbjct: 124 YLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTS-----------------DP 166
Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHL 278
           TY       I     + APE I    +T   D+WS G ++ E+ + GE  +    N + +
Sbjct: 167 TYTSALGGKI--PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI 224
Query: 279 AMMER 283
             +E+
Sbjct: 225 NAIEQ 229

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 79
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 182
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 183 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
Query: 282 ERVLG 286
           ER  G
Sbjct: 237 ERPEG 241

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 74
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 177
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 178 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 282 ERVLG 286
           ER  G
Sbjct: 232 ERPEG 236

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 74
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 177
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 178 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 282 ERVLG 286
           ER  G
Sbjct: 232 ERPEG 236

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 47  IHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKH 99
           I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ Q    
Sbjct: 49  IDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           +      +++         + IV E +   SL  FLRK++ +   I LV  + R +   +
Sbjct: 107 N-----IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG-MLRGIASGM 160
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDF 216
            ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K         
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK--------- 211
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                        +  R + +PE I    +T   D+WS G +L E+ +
Sbjct: 212 -------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 47/238 (19%)
Query: 46  KIHSKMGEGTFGQVLEC----WDR-ERKEMVAIKIVRGIKKYRE--AAMIEIEVLQQLAK 98
           K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +  
Sbjct: 32  KLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 91
Query: 99  HDKGGN---RCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSF-PIDLVREI--- 150
           H    N    C +          + + F K G+ S Y   ++N +  + P DL ++    
Sbjct: 92  HLNVVNLLGACTKPGGPL----MVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTL 147
Query: 151 ------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 204
                 + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD    ++
Sbjct: 148 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 205 MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
                 +K                      + APE I    +T   D+WS G +L E+
Sbjct: 208 GDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEI 243

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 37/244 (15%)
Query: 50  KMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           ++G G FG V   + + R +  VAIK+++      +  + E +V+  L+ H+K     VQ
Sbjct: 16  ELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEK----LVQ 68
Query: 109 IRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +      +  I I+ E + +  L ++LR+  +R F    + E+ + + E + ++     +
Sbjct: 69  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DL   N L+     +KV D+  S +   D     R  K                    
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV----------------- 170
Query: 228 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL----FQTHENLEHLAMMER 283
                  +  PEV++   ++   DIW+ G ++ E+ +   +    F   E  EH+A   R
Sbjct: 171 ------RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 224
Query: 284 VLGP 287
           +  P
Sbjct: 225 LYRP 228

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 22  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 76
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 77  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 179
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 180 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
Query: 282 ERVLG 286
           ER  G
Sbjct: 234 ERPEG 238

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 47  IHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKH 99
           I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ Q    
Sbjct: 49  IDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           +      +++         + IV E +   SL  FLRK++ +   I LV  + R +   +
Sbjct: 107 N-----IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG-MLRGIASGM 160
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDF 216
            ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K         
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK--------- 211
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                        +  R + +PE I    +T   D+WS G +L E+ +
Sbjct: 212 -------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 38/246 (15%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 79
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 169 TDLKPENVLLVSSEYIKVPDYK-SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
            DL   N L+  +  +KV D+  S L T                     G T        
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMT---------------------GDTXTAHAGAK 178
Query: 228 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAM 280
           + +    + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    
Sbjct: 179 FPIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR 235
Query: 281 MERVLG 286
           MER  G
Sbjct: 236 MERPEG 241

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 33  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 87
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 88  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 147
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 190
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 191 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 244
Query: 282 ERVLG 286
           ER  G
Sbjct: 245 ERPEG 249

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 47  IHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKH 99
           I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ Q    
Sbjct: 49  IDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           +      +++         + IV E +   SL  FLRK++ +   I LV  + R +   +
Sbjct: 107 N-----IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG-MLRGIASGM 160
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDF 216
            ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K         
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK--------- 211
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                        +  R + +PE I    +T   D+WS G +L E+ +
Sbjct: 212 -------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 47  IHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKH 99
           I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ Q    
Sbjct: 49  IDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           +      +++         + IV E +   SL  FLRK++ +   I LV  + R +   +
Sbjct: 107 N-----IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG-MLRGIASGM 160
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDF 216
            ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K         
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK--------- 211
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                        +  R + +PE I    +T   D+WS G +L E+ +
Sbjct: 212 -------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/330 (22%), Positives = 133/330 (40%), Gaps = 77/330 (23%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G FG V +C  R    + AIK     KK    ++ E   L+++  H   G     +
Sbjct: 14  KIGSGEFGSVFKCVKRLDGCIYAIKRS---KKPLAGSVDEQNALREVYAHAVLGQHSHVV 70
Query: 110 RNWFDYR--NHICIVFEKL-GSSLYDFLRKNNYR---SFPIDLVREIARQLLECIAFMHD 163
           R +  +   +H+ I  E   G SL D + +N YR    F    ++++  Q+   + ++H 
Sbjct: 71  RYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLLQVGRGLRYIHS 129
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           + ++H D+KP N+ +  +    +P+  S      D +  K M      K+ D G  T   
Sbjct: 130 MSLVHMDIKPSNIFISRT---SIPNAASEEGDEDDWASNKVM-----FKIGDLGHVTRIS 181
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
             Q     +R + A EV L   +T+    DI+++   +V     E               
Sbjct: 182 SPQVEEGDSR-FLANEV-LQENYTHLPKADIFALALTVVXAAGAE--------------- 224
Query: 282 ERVLGPLPQHMLKRVDRHAEKY--VRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
                PLP        R+ +++  +R+GR                  LPR+  ++ Q   
Sbjct: 225 -----PLP--------RNGDQWHEIRQGR------------------LPRIPQVLSQ--- 250
Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRH 369
               + T LL+ ++  DP  R +A   ++H
Sbjct: 251 ----EFTELLKVMIHPDPERRPSAMALVKH 276

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPN----LVQL 281
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 341
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            +L   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 384
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 385 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 438
Query: 282 ERVLG 286
           ER  G
Sbjct: 439 ERPEG 443

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 41/226 (18%)
Query: 47  IHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKH 99
           I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ Q    
Sbjct: 37  IDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           +      +++         + IV E +   SL  FLRK++ +   I LV  + R +   +
Sbjct: 95  N-----IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV-GMLRGIASGM 148
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDF 216
            ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K         
Sbjct: 149 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK--------- 199
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
                        +  R + +PE I    +T   D+WS G +L E+
Sbjct: 200 -------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEV 231

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 47  IHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKH 99
           I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ Q    
Sbjct: 47  IDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 104
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           +      +++         + IV E +   SL  FLRK++ +   I LV  + R +   +
Sbjct: 105 N-----IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG-MLRGIASGM 158
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDF 216
            ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K         
Sbjct: 159 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK--------- 209
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                        +  R + +PE I    +T   D+WS G +L E+ +
Sbjct: 210 -------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 104/247 (42%), Gaps = 36/247 (14%)
Query: 46  KIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAK 98
           KI   +G G FG+V  C  R     +++  VAIK ++G   ++ R   + E  ++ Q   
Sbjct: 17  KIEEVIGAGEFGEV--CRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEH 74
Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYD-FLRKNNYRSFPIDLVREIARQLLEC 157
            +      +++         + I+ E + +   D FLR N+ +   I LV  + R +   
Sbjct: 75  PN-----IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV-GMLRGIASG 128
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + ++ ++  +H DL   N+L+ S+   KV D+  S    ++SS                 
Sbjct: 129 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS----------------- 171
Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 276
             TY       I     + APE I    +T   D WS G ++ E+ + GE  +    N +
Sbjct: 172 DPTYTSSLGGKI--PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD 229
Query: 277 HLAMMER 283
            +  +E+
Sbjct: 230 VINAIEQ 236

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 37/219 (16%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+   +G+G FG V+      R   VA+K ++      +A + E  V+ QL +H    + 
Sbjct: 24  KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 75
Query: 106 CVQIRNWF-DYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            VQ+     + +  + IV E +   SL D+LR         D + + +  + E + ++  
Sbjct: 76  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              +H DL   NVL+                            + +  KV DFG T    
Sbjct: 136 NNFVHRDLAARNVLV---------------------------SEDNVAKVSDFGLTKEAS 168
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
             Q+       + APE +    ++   D+WS G +L E+
Sbjct: 169 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 41/226 (18%)
Query: 47  IHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKH 99
           I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ Q    
Sbjct: 20  IDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           +      +++         + IV E +   SL  FLRK++ +   I LV  + R +   +
Sbjct: 78  N-----IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG-MLRGIASGM 131
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDF 216
            ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K         
Sbjct: 132 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK--------- 182
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
                        +  R + +PE I    +T   D+WS G +L E+
Sbjct: 183 -------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEV 214

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 104/250 (41%), Gaps = 46/250 (18%)
Query: 46  KIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAK 98
           KI   +G G FG+V  C  R     +R   VAIK ++    +K R   + E  ++ Q   
Sbjct: 46  KIERVIGAGEFGEV--CSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDH 103
Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYD-FLRKNNYRSFPIDLVREIARQLLEC 157
            +      V +         + IV E + +   D FLRK++ +   I LV  + R +   
Sbjct: 104 PN-----VVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVG-MLRGIAAG 157
Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + ++ D+  +H DL   N+L+ S+   KV D+  S                   +VI+  
Sbjct: 158 MRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLS-------------------RVIE-- 196
Query: 218 STTYERPDQNYIVSTR----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 272
               + P+  Y  +       + APE I    +T   D+WS G ++ E+ + GE  +   
Sbjct: 197 ----DDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 252
Query: 273 ENLEHLAMME 282
            N + +  +E
Sbjct: 253 SNQDVIKAIE 262

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 24/148 (16%)
Query: 119 ICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPEN 175
           + I  E   +SL  F ++  +  ++ P D++ +IA  +++ +  +H  L +IH D+KP N
Sbjct: 108 VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 167
Query: 176 VLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHY 235
           VL+ +   +K  D+  S +   D +           K ID G   Y  P+          
Sbjct: 168 VLINALGQVKXCDFGISGYLVDDVA-----------KDIDAGCKPYXAPE---------- 206
Query: 236 RAPEVILGLGWTYPCDIWSVGCILVELC 263
           R    +   G++   DIWS+G   +EL 
Sbjct: 207 RINPELNQKGYSVKSDIWSLGITXIELA 234

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPN----LVQL 320
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 321 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 380
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            +L   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 423
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 424 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 477
Query: 282 ERVLG 286
           ER  G
Sbjct: 478 ERPEG 482

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 108/244 (44%), Gaps = 37/244 (15%)
Query: 50  KMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           ++G G FG V   + + R +  VAIK+++      +  + E +V+  L+ H+K     VQ
Sbjct: 31  ELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEK----LVQ 83
Query: 109 IRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +      +  I I+ E + +  L ++LR+  +R F    + E+ + + E + ++     +
Sbjct: 84  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DL   N L+     +KV D+  S +   D        ++S++     GS    R    
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-------ETSSV-----GSKFPVR---- 186
Query: 228 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL----FQTHENLEHLAMMER 283
                  +  PEV++   ++   DIW+ G ++ E+ +   +    F   E  EH+A   R
Sbjct: 187 -------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 239
Query: 284 VLGP 287
           +  P
Sbjct: 240 LYRP 243

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 96/241 (39%), Gaps = 51/241 (21%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQLAK 98
           K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +  
Sbjct: 21  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 80
Query: 99  HDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLR-KNN----YRSFPIDLVREI 150
           H    N    C +          + + F K G+ L  +LR K N    Y+  P DL ++ 
Sbjct: 81  HLNVVNLLGACTKPGGPL----MVIVEFCKFGN-LSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 151 ---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 201
                    + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD   
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 261
            ++      +K                      + APE I    +T   D+WS G +L E
Sbjct: 196 VRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 262 L 262
           +
Sbjct: 234 I 234

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 91/232 (39%), Gaps = 47/232 (20%)
Query: 51  MGEGTFGQVLEC----WDR-ERKEMVAIKIVRGIKKYRE--AAMIEIEVLQQLAKHDKGG 103
           +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +  H    
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 104 N---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPI-DLVREI--------- 150
           N    C +          + + F K G+ L  +LR       P  DL ++          
Sbjct: 95  NLLGACTKPGGPL----MVIVEFCKFGN-LSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 151 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 210
           + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD  Y ++      
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 211 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
           +K                      + APE I    +T   D+WS G +L E+
Sbjct: 210 LK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEI 239

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 37/219 (16%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+   +G+G FG V+      R   VA+K ++      +A + E  V+ QL +H    + 
Sbjct: 9   KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 60
Query: 106 CVQIRNWF-DYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            VQ+     + +  + IV E +   SL D+LR         D + + +  + E + ++  
Sbjct: 61  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              +H DL   NVL+                            + +  KV DFG T    
Sbjct: 121 NNFVHRDLAARNVLV---------------------------SEDNVAKVSDFGLTKEAS 153
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
             Q+       + APE +    ++   D+WS G +L E+
Sbjct: 154 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 96/241 (39%), Gaps = 51/241 (21%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQLAK 98
           K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +  
Sbjct: 30  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 99  HDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLR-KNN----YRSFPIDLVREI 150
           H    N    C +          + + F K G+ L  +LR K N    Y+  P DL ++ 
Sbjct: 90  HLNVVNLLGACTKPGGPL----MVIVEFCKFGN-LSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 151 ---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 201
                    + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD   
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 261
            ++      +K                      + APE I    +T   D+WS G +L E
Sbjct: 205 VRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 262 L 262
           +
Sbjct: 243 I 243

>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G FG V +C  R    + AIK     KK    ++ E   L+++  H   G     +
Sbjct: 18  KIGSGEFGSVFKCVKRLDGCIYAIKRS---KKPLAGSVDEQNALREVYAHAVLGQHSHVV 74
Query: 110 RNWFDYR--NHICIVFEKL-GSSLYDFLRKNNYR---SFPIDLVREIARQLLECIAFMHD 163
           R +  +   +H+ I  E   G SL D + +N YR    F    ++++  Q+   + ++H 
Sbjct: 75  RYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLLQVGRGLRYIHS 133
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           + ++H D+KP N+ +  +    +P+  S      D +  K M      K+ D G  T
Sbjct: 134 MSLVHMDIKPSNIFISRT---SIPNAASEEGDEDDWASNKVM-----FKIGDLGHVT 182

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/271 (19%), Positives = 106/271 (39%), Gaps = 36/271 (13%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR--EAAMIEIEVLQQLAKHDKGGNRCVQ 108
           +G+G    V     ++  ++ AIK+   I   R  +  M E EVL++L  + K   +   
Sbjct: 17  LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL--NHKNIVKLFA 74
Query: 109 IRNWFDYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           I      R+ + I+      SLY  L + +N    P      + R ++  +  + +  ++
Sbjct: 75  IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 168 HTDLKPENVLLVSSE----YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           H ++KP N++ V  E      K+ D+ ++     D  +           V  +G+  Y  
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF-----------VXLYGTEEYLH 183
Query: 224 PD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL-EHLAM 280
           PD  +  ++   H +         +    D+WS+G       TG   F+  E    +  +
Sbjct: 184 PDMYERAVLRKDHQKK--------YGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDW 311
           M +++   P   +  V +        G +DW
Sbjct: 236 MYKIITGKPSGAISGVQK-----AENGPIDW 261

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 43/247 (17%)
Query: 50  KMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           ++G G FG V   + + R +  VAIK+++      +  + E +V+  L+ H+K     VQ
Sbjct: 31  ELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEK----LVQ 83
Query: 109 IRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +      +  I I+ E + +  L ++LR+  +R F    + E+ + + E + ++     +
Sbjct: 84  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKD---SSYFKRMPKSSAIKVIDFGSTTYERP 224
           H DL   N L+     +KV D+  S +   D   SS   + P                  
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP------------------ 184
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL----FQTHENLEHLAM 280
                     +  PEV++   ++   DIW+ G ++ E+ +   +    F   E  EH+A 
Sbjct: 185 --------VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 236
Query: 281 MERVLGP 287
             R+  P
Sbjct: 237 GLRLYRP 243

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 99/246 (40%), Gaps = 38/246 (15%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G FG+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 18  KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 72
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 73  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 169 TDLKPENVLLVSSEYIKVPDYK-SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
            DL   N L+  +  +KV D+  S L T                     G T        
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMT---------------------GDTXTAHAGAK 171
Query: 228 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAM 280
           + +    + APE +    ++   D+W+ G +L E+ T       G    Q +E LE    
Sbjct: 172 FPIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR 228
Query: 281 MERVLG 286
           MER  G
Sbjct: 229 MERPEG 234

>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G FG V +C  R    + AIK     KK    ++ E   L+++  H   G     +
Sbjct: 16  KIGSGEFGSVFKCVKRLDGCIYAIKRS---KKPLAGSVDEQNALREVYAHAVLGQHSHVV 72
Query: 110 RNWFDYR--NHICIVFEKL-GSSLYDFLRKNNYR---SFPIDLVREIARQLLECIAFMHD 163
           R +  +   +H+ I  E   G SL D + +N YR    F    ++++  Q+   + ++H 
Sbjct: 73  RYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLLQVGRGLRYIHS 131
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           + ++H D+KP N+ +  +    +P+  S      D +  K M      K+ D G  T
Sbjct: 132 MSLVHMDIKPSNIFISRT---SIPNAASEEGDEDDWASNKVM-----FKIGDLGHVT 180

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 47  IHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKH 99
           I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ Q    
Sbjct: 49  IDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           +      +++         + IV E +   SL  FLRK++ +   I LV  + R +   +
Sbjct: 107 N-----IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG-MLRGIASGM 160
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDF 216
            ++ D+  +H DL   N+L+ S+   KV D+  +  L    +++Y  R  K         
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGK--------- 211
Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                        +  R + +PE I    +T   D+WS G +L E+ +
Sbjct: 212 -------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 94/241 (39%), Gaps = 51/241 (21%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQLAK 98
           K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +  
Sbjct: 21  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 80
Query: 99  HDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLR-KNN----YRSFPIDLVREI 150
           H    N    C +           C    K G+ L  +LR K N    Y+  P DL ++ 
Sbjct: 81  HLNVVNLLGACTKPGGPLMVITEFC----KFGN-LSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 151 ---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 201
                    + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD   
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 261
            ++      +K                      + APE I    +T   D+WS G +L E
Sbjct: 196 VRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 262 L 262
           +
Sbjct: 234 I 234

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 43/247 (17%)
Query: 50  KMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           ++G G FG V   + + R +  VAIK+++      +  + E +V+  L+ H+K     VQ
Sbjct: 11  ELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEK----LVQ 63
Query: 109 IRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +      +  I I+ E + +  L ++LR+  +R F    + E+ + + E + ++     +
Sbjct: 64  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 122
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKD---SSYFKRMPKSSAIKVIDFGSTTYERP 224
           H DL   N L+     +KV D+  S +   D   SS   + P                  
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP------------------ 164
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL----FQTHENLEHLAM 280
                     +  PEV++   ++   DIW+ G ++ E+ +   +    F   E  EH+A 
Sbjct: 165 --------VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 216
Query: 281 MERVLGP 287
             R+  P
Sbjct: 217 GLRLYRP 223

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 43/247 (17%)
Query: 50  KMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           ++G G FG V   + + R +  VAIK+++      +  + E +V+  L+ H+K     VQ
Sbjct: 16  ELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEK----LVQ 68
Query: 109 IRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +      +  I I+ E + +  L ++LR+  +R F    + E+ + + E + ++     +
Sbjct: 69  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKD---SSYFKRMPKSSAIKVIDFGSTTYERP 224
           H DL   N L+     +KV D+  S +   D   SS   + P                  
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP------------------ 169
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL----FQTHENLEHLAM 280
                     +  PEV++   ++   DIW+ G ++ E+ +   +    F   E  EH+A 
Sbjct: 170 --------VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 221
Query: 281 MERVLGP 287
             R+  P
Sbjct: 222 GLRLYRP 228

>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G FG V +C  R    + AIK     KK    ++ E   L+++  H   G     +
Sbjct: 16  KIGSGEFGSVFKCVKRLDGCIYAIKRS---KKPLAGSVDEQNALREVYAHAVLGQHSHVV 72
Query: 110 RNWFDYR--NHICIVFEKL-GSSLYDFLRKNNYR---SFPIDLVREIARQLLECIAFMHD 163
           R +  +   +H+ I  E   G SL D + +N YR    F    ++++  Q+   + ++H 
Sbjct: 73  RYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLLQVGRGLRYIHS 131
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           + ++H D+KP N+ +  +    +P+  S      D +  K M      K+ D G  T
Sbjct: 132 MSLVHMDIKPSNIFISRT---SIPNAASEEGDEDDWASNKVM-----FKIGDLGHVT 180

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 43/247 (17%)
Query: 50  KMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           ++G G FG V   + + R +  VAIK+++      +  + E +V+  L+ H+K     VQ
Sbjct: 22  ELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEK----LVQ 74
Query: 109 IRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +      +  I I+ E + +  L ++LR+  +R F    + E+ + + E + ++     +
Sbjct: 75  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 133
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKD---SSYFKRMPKSSAIKVIDFGSTTYERP 224
           H DL   N L+     +KV D+  S +   D   SS   + P                  
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP------------------ 175
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL----FQTHENLEHLAM 280
                     +  PEV++   ++   DIW+ G ++ E+ +   +    F   E  EH+A 
Sbjct: 176 --------VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 227
Query: 281 MERVLGP 287
             R+  P
Sbjct: 228 GLRLYRP 234

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/271 (19%), Positives = 106/271 (39%), Gaps = 36/271 (13%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR--EAAMIEIEVLQQLAKHDKGGNRCVQ 108
           +G+G    V     ++  ++ AIK+   I   R  +  M E EVL++L  + K   +   
Sbjct: 17  LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL--NHKNIVKLFA 74
Query: 109 IRNWFDYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           I      R+ + I+      SLY  L + +N    P      + R ++  +  + +  ++
Sbjct: 75  IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 168 HTDLKPENVLLVSSE----YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           H ++KP N++ V  E      K+ D+ ++     D  +           V  +G+  Y  
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF-----------VSLYGTEEYLH 183
Query: 224 PD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL-EHLAM 280
           PD  +  ++   H +         +    D+WS+G       TG   F+  E    +  +
Sbjct: 184 PDMYERAVLRKDHQKK--------YGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235
Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDW 311
           M +++   P   +  V +        G +DW
Sbjct: 236 MYKIITGKPSGAISGVQK-----AENGPIDW 261

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 49/232 (21%)
Query: 47  IHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKH 99
           I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ Q    
Sbjct: 49  IDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           +      +++         + IV E +   SL  FLRK++ +   I LV  + R +   +
Sbjct: 107 N-----IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG-MLRGIASGM 160
Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            ++ D+  +H DL   N+L+ S+   KV D+                           G 
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFG-------------------------LGR 195
Query: 219 TTYERPDQNYIVSTR------HYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
              + P+  Y  +TR       + +PE I    +T   D+WS G +L E+ +
Sbjct: 196 VLEDDPEAAY--TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 37/219 (16%)
Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+   +G+G FG V+      R   VA+K ++      +A + E  V+ QL +H    + 
Sbjct: 196 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 247
Query: 106 CVQIRNWF-DYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            VQ+     + +  + IV E +   SL D+LR         D + + +  + E + ++  
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              +H DL   NVL+                            + +  KV DFG T    
Sbjct: 308 NNFVHRDLAARNVLV---------------------------SEDNVAKVSDFGLTKEAS 340
Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
             Q+       + APE +    ++   D+WS G +L E+
Sbjct: 341 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 379

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 43/247 (17%)
Query: 50  KMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           ++G G FG V   + + R +  VAIK+++      +  + E +V+  L+ H+K     VQ
Sbjct: 15  ELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEK----LVQ 67
Query: 109 IRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +      +  I I+ E + +  L ++LR+  +R F    + E+ + + E + ++     +
Sbjct: 68  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 126
Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKD---SSYFKRMPKSSAIKVIDFGSTTYERP 224
           H DL   N L+     +KV D+  S +   D   SS   + P                  
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP------------------ 168
Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL----FQTHENLEHLAM 280
                     +  PEV++   ++   DIW+ G ++ E+ +   +    F   E  EH+A 
Sbjct: 169 --------VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 220
Query: 281 MERVLGP 287
             R+  P
Sbjct: 221 GLRLYRP 227

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 90/232 (38%), Gaps = 56/232 (24%)
Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK----HDKGGNRC 106
           +G G FGQV +   R   +   IK V   K   E A  E++ L +L      H  G   C
Sbjct: 19  IGSGGFGQVFKAKHRIDGKTYVIKRV---KYNNEKAEREVKALAKLDHVNIVHYNG---C 72
Query: 107 VQIRNWFDY----------RNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIAR 152
               + FDY          R+    +F ++      +L  ++ K         L  E+  
Sbjct: 73  W---DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129
Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+ + + ++H   +I+ DLKP N+ LV ++ +K+                          
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIG------------------------- 164
Query: 213 VIDFGSTTYERPDQNYIVS--TRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
             DFG  T  + D     S  T  Y +PE I    +    D++++G IL EL
Sbjct: 165 --DFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 86/238 (36%), Gaps = 54/238 (22%)
Query: 51  MGEGTFGQVLECW-----DRERKEMVAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGG 103
           +G G FG+V+E         +    VA+K+++       REA M E++VL  L  H    
Sbjct: 31  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 104 N---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLVR------- 148
           N    C           + C         L +FLR+        ++ P  +         
Sbjct: 91  NLLGACTIGGPTLVITEYCCY------GDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 149 ----EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 204
                 + Q+ + +AF+     IH DL   N+LL      K+ D+  +     DS+Y  +
Sbjct: 145 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 205 MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
                 +K                      + APE I    +T+  D+WS G  L EL
Sbjct: 205 GNARLPVK----------------------WMAPESIFNCVYTFESDVWSYGIFLWEL 240

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 96/241 (39%), Gaps = 51/241 (21%)
Query: 46  KIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQLAK 98
           K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +  
Sbjct: 30  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 99  HDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLR-KNN----YRSFPIDLVREI 150
           H    N    C +          + + F K G+ L  +LR K N    Y+  P DL ++ 
Sbjct: 90  HLNVVNLLGACTKPGGPL----MVIVEFCKFGN-LSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 151 ---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 201
                    + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD   
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDX 204
Query: 202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 261
            ++      +K                      + APE I    +T   D+WS G +L E
Sbjct: 205 VRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 262 L 262
           +
Sbjct: 243 I 243

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/225 (21%), Positives = 96/225 (42%), Gaps = 42/225 (18%)
Query: 51  MGEGTFGQV----LECWDRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGN 104
           +G G FG+V    L+    +++  VAIK ++    +K R   + E  ++ Q + H+    
Sbjct: 52  IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN---- 107
Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYD-FLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             +++         + I+ E + +   D FLR+ +     + LV  + R +   + ++ +
Sbjct: 108 -IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLV-GMLRGIAAGMKYLAN 165
Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           +  +H DL   N+L+ S+   KV D+  S                   +V++      + 
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLS-------------------RVLE------DD 200
Query: 224 PDQNYIVSTRH----YRAPEVILGLGWTYPCDIWSVGCILVELCT 264
           P+  Y  S       + APE I    +T   D+WS G ++ E+ T
Sbjct: 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 99/246 (40%), Gaps = 38/246 (15%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 18  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 72
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 73  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 169 TDLKPENVLLVSSEYIKVPDYK-SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
            DL   N L+  +  +KV D+  S L T                     G T        
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMT---------------------GDTXTAHAGAK 171
Query: 228 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAM 280
           + +    + APE +    ++   D+W+ G +L E+ T       G    Q +E LE    
Sbjct: 172 FPIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR 228
Query: 281 MERVLG 286
           MER  G
Sbjct: 229 MERPEG 234

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 46/236 (19%)
Query: 50  KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCV 107
           ++G G FG V L  W  +    VA+K+++      E +M E E  Q+     K  + + V
Sbjct: 15  ELGSGQFGVVKLGKWKGQYD--VAVKMIK------EGSMSEDEFFQEAQTMMKLSHPKLV 66
Query: 108 QIRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           +          I IV E + +  L ++LR +     P  L+ E+   + E +AF+     
Sbjct: 67  KFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL-EMCYDVCEGMAFLESHQF 125
Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           IH DL   N L+                            +   +KV DFG T Y   DQ
Sbjct: 126 IHRDLAARNCLV---------------------------DRDLCVKVSDFGMTRYVLDDQ 158
Query: 227 NYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 276
            Y+ S        + APEV     ++   D+W+ G ++ E+ + G+  +  + N E
Sbjct: 159 -YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE 213

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 57/142 (40%), Gaps = 34/142 (23%)
Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
           E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                      
Sbjct: 115 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS--------------------- 153
Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE- 261
                 DFG +   R D+N   +  H      + APE I    ++   D+WS G ++ E 
Sbjct: 154 ------DFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 207
Query: 262 LCTGEALFQTHENLEHLAMMER 283
              G+  ++  +  E  AM+E+
Sbjct: 208 FSYGQKPYRGMKGSEVTAMLEK 229

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 86/238 (36%), Gaps = 54/238 (22%)
Query: 51  MGEGTFGQVLECW-----DRERKEMVAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGG 103
           +G G FG+V+E         +    VA+K+++       REA M E++VL  L  H    
Sbjct: 49  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 104 N---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLVR------- 148
           N    C           + C         L +FLR+        ++ P  +         
Sbjct: 109 NLLGACTIGGPTLVITEYCCY------GDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 149 ----EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 204
                 + Q+ + +AF+     IH DL   N+LL      K+ D+  +     DS+Y  +
Sbjct: 163 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 205 MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
                 +K                      + APE I    +T+  D+WS G  L EL
Sbjct: 223 GNARLPVK----------------------WMAPESIFNCVYTFESDVWSYGIFLWEL 258

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 86/238 (36%), Gaps = 54/238 (22%)
Query: 51  MGEGTFGQVLECW-----DRERKEMVAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGG 103
           +G G FG+V+E         +    VA+K+++       REA M E++VL  L  H    
Sbjct: 47  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 104 N---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLVR------- 148
           N    C           + C         L +FLR+        ++ P  +         
Sbjct: 107 NLLGACTIGGPTLVITEYCCY------GDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 149 ----EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 204
                 + Q+ + +AF+     IH DL   N+LL      K+ D+  +     DS+Y  +
Sbjct: 161 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 205 MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
                 +K                      + APE I    +T+  D+WS G  L EL
Sbjct: 221 GNARLPVK----------------------WMAPESIFNCVYTFESDVWSYGIFLWEL 256

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 86/238 (36%), Gaps = 54/238 (22%)
Query: 51  MGEGTFGQVLECW-----DRERKEMVAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGG 103
           +G G FG+V+E         +    VA+K+++       REA M E++VL  L  H    
Sbjct: 54  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 104 N---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLVR------- 148
           N    C           + C         L +FLR+        ++ P  +         
Sbjct: 114 NLLGACTIGGPTLVITEYCCY------GDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 149 ----EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 204
                 + Q+ + +AF+     IH DL   N+LL      K+ D+  +     DS+Y  +
Sbjct: 168 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 205 MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
                 +K                      + APE I    +T+  D+WS G  L EL
Sbjct: 228 GNARLPVK----------------------WMAPESIFNCVYTFESDVWSYGIFLWEL 263

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 99/249 (39%), Gaps = 36/249 (14%)
Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           K+G G +G+V     ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 39  KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 93
Query: 110 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                      IV E +   +L D+LR+ N       ++  +A Q+   + ++     IH
Sbjct: 94  LGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIH 153
Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 228
            DL   N L+  +  +KV D+  S     D +Y         IK                
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGD-TYTAHAGAKFPIK---------------- 196
Query: 229 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 281
                 + APE +    ++   D+W+ G +L E+ T       G  L Q ++ LE    M
Sbjct: 197 ------WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRM 250
Query: 282 ERVLGPLPQ 290
           E+  G  P+
Sbjct: 251 EQPEGCPPK 259

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	379
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	1e-173
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	1e-170
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-165
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-139
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-133
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-129
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-110
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-54
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-54
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-50
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	9e-50
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	1e-48
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-48
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	4e-48
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-47
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-47
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-47
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-46
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-46
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	5e-46
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-45
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-45
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-45
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	9e-45
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	5e-44
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-43
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	4e-43
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-42
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-41
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-41
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-41
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	5e-41
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	7e-41
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-40
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-40
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-40
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	9e-40
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-39
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-39
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-39
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-39
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	5e-39
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	7e-39
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	9e-39
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-38
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-38
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-38
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-38
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-38
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-38
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-38
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-38
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-37
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-37
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-37
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-37
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-37
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-37
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	3e-37
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	3e-37
3bhy_A	283	Death-associated protein kinase 3; death associate	4e-37
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	5e-37
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	5e-37
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	7e-37
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-36
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-36
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-36
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-36
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-36
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-36
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-36
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-36
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	4e-36
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	6e-36
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	8e-36
3rp9_A	458	Mitogen-activated protein kinase; structural genom	9e-36
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-35
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-35
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	4e-35
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	5e-35
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-35
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	8e-35
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-34
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-34
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	6e-34
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	8e-34
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	8e-34
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-33
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-33
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-33
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	4e-33
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	6e-33
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-32
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	5e-32
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	6e-32
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	8e-32
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-31
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	6e-31
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-30
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-30
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	7e-30
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	7e-30
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	9e-30
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-27
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-26
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-26
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	9e-26
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	7e-24
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	9e-24
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-23
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-23
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-23
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-23
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-23
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	6e-23
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-22
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	4e-22
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	5e-22
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	7e-22
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-21
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-21
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	4e-21
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	9e-21
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-20
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-20
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-20
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-20
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-20
3an0_A	340	Dual specificity mitogen-activated protein kinase;	6e-20
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	7e-20
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	8e-20
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	9e-20
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-19
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-19
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-19
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	6e-19
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	6e-19
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-18
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-18
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-18
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-18
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	5e-18
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	5e-18
3aln_A	327	Dual specificity mitogen-activated protein kinase;	5e-18
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	6e-18
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	6e-18
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	6e-18
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	7e-18
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	7e-18
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	9e-18
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-17
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-17
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-17
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-17
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	4e-17
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	5e-17
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	5e-17
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	6e-17
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	6e-17
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	7e-17
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-16
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-16
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-16
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	1e-16
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	3e-16
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-15
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-15
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-15
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-15
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-15
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-15
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-15
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	1e-14
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-14
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-14
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-14
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-13
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-13
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	7e-13
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-12
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-12
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-12
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-12
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	5e-12
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	7e-12
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	9e-12
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	2e-11
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-11
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-11
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	4e-11
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-11
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-11
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	8e-11
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	9e-11
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-10
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-10
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-10
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-10
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	3e-10
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	5e-10
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	9e-10
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-09
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-09
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	9e-09
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-08
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-08
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	6e-08
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	7e-08
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-07
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	3e-07
3uqc_A	286	Probable conserved transmembrane protein; structur	3e-07
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-07
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-06
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	4e-06
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	6e-06
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	7e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-05
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-05
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-05
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	4e-05
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	6e-05
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-04
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-04
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-04
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	5e-04
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	5e-04
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	6e-04

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  485 bits (1251), Expect = e-173
 Identities = 130/330 (39%), Positives = 192/330 (58%), Gaps = 11/330 (3%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
            +  KMG+GTFG+VL C   + K+  A+K+VR IKKY  +A IE ++L+++   D   N 
Sbjct: 38  LVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNN 97

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            V+    F Y +H+C++FE LG SLY+ + +NNY  F I+ ++    ++L+ + ++  + 
Sbjct: 98  IVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS 157

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           + HTDLKPEN+LL    + K       +   K         KS+ IK+IDFG  T++   
Sbjct: 158 LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQI--YRTKSTGIKLIDFGCATFKSDY 215

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
              I++TR YRAPEVIL LGW    D+WS GC+L EL TG  LF+THE++EHLAMME ++
Sbjct: 216 HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESII 275

Query: 286 GPLPQHMLKRVDR-HAEKYVRRG--RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
            P+P++ML    + +  KYV +   +L WPE A+S  SIK V K   L  +I   +    
Sbjct: 276 QPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHEL---- 331

Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                 L  +L+ DPT R +  E L+H F 
Sbjct: 332 --FCDFLYSILQIDPTLRPSPAELLKHKFL 359

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  478 bits (1233), Expect = e-170
 Identities = 149/331 (45%), Positives = 211/331 (63%), Gaps = 15/331 (4%)

Query: 46  KIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG- 103
           +I   +GEG FG+V+EC D +     VA+KIV+ + +Y EAA  EI+VL+ L   D    
Sbjct: 17  EIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNST 76

Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            RCVQ+  WF++  HICIVFE LG S YDF+++N +  F +D +R++A Q+ + + F+H 
Sbjct: 77  FRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS 136

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             + HTDLKPEN+L V S+Y +  + K            +R   +  IKV+DFGS TY+ 
Sbjct: 137 NKLTHTDLKPENILFVQSDYTEAYNPKIKRD--------ERTLINPDIKVVDFGSATYDD 188

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
              + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +F TH++ EHLAMMER
Sbjct: 189 EHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER 248

Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
           +LGPLP+HM+++  +   KY    RLDW E +++   +    K P  + ++ Q V+H   
Sbjct: 249 ILGPLPKHMIQKTRKR--KYFHHDRLDWDEHSSAGRYVSRACK-PLKEFMLSQDVEHER- 304

Query: 344 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            L  L+Q +L YDP  R+T REAL+HPFF  
Sbjct: 305 -LFDLIQKMLEYDPAKRITLREALKHPFFDL 334

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  464 bits (1197), Expect = e-165
 Identities = 144/331 (43%), Positives = 209/331 (63%), Gaps = 15/331 (4%)

Query: 46  KIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG- 103
           +I   +GEGTFG+V+EC D  R K  VA+KI+R + KYREAA +EI VL+++ + DK   
Sbjct: 22  EIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENK 81

Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             CV + +WF++  H+CI FE LG + ++FL++NN++ +P+  VR +A QL   + F+H+
Sbjct: 82  FLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE 141

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             + HTDLKPEN+L V+SE+  + +   S          ++  K+++I+V DFGS T++ 
Sbjct: 142 NQLTHTDLKPENILFVNSEFETLYNEHKSCE--------EKSVKNTSIRVADFGSATFDH 193

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
                IV+TRHYR PEVIL LGW  PCD+WS+GCIL E   G  LFQTHEN EHL MME+
Sbjct: 194 EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 253

Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
           +LGP+P HM+ R  +   KY  +G L W E ++    +K   K P    ++   ++H   
Sbjct: 254 ILGPIPSHMIHRTRKQ--KYFYKGGLVWDENSSDGRYVKENCK-PLKSYMLQDSLEHV-- 308

Query: 344 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            L  L++ +L +DP  R+T  EAL HPFF  
Sbjct: 309 QLFDLMRRMLEFDPAQRITLAEALLHPFFAG 339

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  401 bits (1031), Expect = e-139
 Identities = 109/340 (32%), Positives = 162/340 (47%), Gaps = 36/340 (10%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG-N 104
           ++   +G+G+FGQV++ +D +  + VA+K+VR  K++   A  EI +L+ L K DK    
Sbjct: 100 EVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTM 159

Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
             + +   F +RNHIC+ FE L  +LY+ ++KN ++ F + LVR+ A  +L+C+  +H  
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN 219

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +IH DLKPEN+LL                              S IKVIDFGS+ YE  
Sbjct: 220 RIIHCDLKPENILLKQ-------------------------QGRSGIKVIDFGSSCYEHQ 254

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
                + +R YRAPEVILG  +  P D+WS+GCIL EL TG  L    +  + LA M  +
Sbjct: 255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL 314

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEG----------AASRESIKSVMKLPRLQNLI 334
           LG   Q +L    R       +G   +                R     +   P  +   
Sbjct: 315 LGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWG 374

Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                         L+  L +DP  R+T  +ALRHP+  R
Sbjct: 375 NALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  384 bits (989), Expect = e-133
 Identities = 111/347 (31%), Positives = 174/347 (50%), Gaps = 43/347 (12%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG-N 104
           +I S +G+G+FGQV++ +DR  +E VAIKI++  K +   A IE+ +L+ + KHD     
Sbjct: 57  EIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKY 116

Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-- 162
             V ++  F +RNH+C+VFE L  +LYD LR  N+R   ++L R+ A+Q+   + F+   
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP 176

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
           +L +IH DLKPEN+LL +                         PK SAIK++DFGS+   
Sbjct: 177 ELSIIHCDLKPENILLCN-------------------------PKRSAIKIVDFGSSCQL 211

Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
                  + +R YR+PEV+LG+ +    D+WS+GCILVE+ TGE LF     ++ +  + 
Sbjct: 212 GQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271

Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR-LQNLIMQHVDHS 341
            VLG  P H+L +  +  + + +     W          +      R L N++       
Sbjct: 272 EVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGP 331

Query: 342 AG--------------DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            G                  L+  +L YDP  R+    AL+H FF +
Sbjct: 332 GGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 378

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  375 bits (965), Expect = e-129
 Identities = 102/349 (29%), Positives = 166/349 (47%), Gaps = 51/349 (14%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK---- 101
            +  K+G G F  V    D      VA+KIVRG K Y EAA  EI++LQ++   D     
Sbjct: 22  ILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKED 81

Query: 102 --GGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
             G N  +++ + F+++     H+ +VFE LG +L   ++K  +R  P+  V++I++QLL
Sbjct: 82  SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLL 141

Query: 156 ECIAFMHDLC-MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
             + +MH  C +IHTD+KPENVL+   +  +                         IK+ 
Sbjct: 142 LGLDYMHRRCGIIHTDIKPENVLMEIVDSPE---------------------NLIQIKIA 180

Query: 215 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE- 273
           D G+  +        + TR YR+PEV+LG  W    DIWS  C++ EL TG+ LF+  E 
Sbjct: 181 DLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEG 240

Query: 274 -----NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 328
                + +H+A +  +LG LP ++L+        +  RG L             S +K  
Sbjct: 241 HSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRN----------ISKLKFW 290

Query: 329 RLQNLIM---QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            L++++    +     A +++  L  +L+ DP  R  A   + HP+   
Sbjct: 291 PLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD 339

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score =  326 bits (836), Expect = e-110
 Identities = 101/366 (27%), Positives = 170/366 (46%), Gaps = 49/366 (13%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK---G 102
            +  K+G G F  V   WD + K+ VA+K+V+  + Y E A+ EI +L+ +   D     
Sbjct: 40  HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPN 99

Query: 103 GNRCVQIRNWFDYR----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
               VQ+ + F        HIC+VFE LG  L  ++ K+NY+  P+  V++I +Q+L+ +
Sbjct: 100 REMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGL 159

Query: 159 AFMHDLC-MIHTDLKPENVLLVSSEY----------------------IKVPDYKSSLHT 195
            ++H  C +IHTD+KPEN+LL  +E                         V    ++   
Sbjct: 160 DYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGN 219

Query: 196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSV 255
              +    +  +   +K+ D G+  +        + TR YR+ EV++G G+  P DIWS 
Sbjct: 220 FLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWST 279

Query: 256 GCILVELCTGEALFQTHENLE------HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL 309
            C+  EL TG+ LF+ H   E      H+A++  +LG +P+ ++       E + ++G L
Sbjct: 280 ACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL 339

Query: 310 DWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD---LTHLLQGLLRYDPTDRLTAREA 366
                          +K   L  ++++  + S  +    T  L  +L   P  R TA E 
Sbjct: 340 KHITK----------LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAEC 389

Query: 367 LRHPFF 372
           LRHP+ 
Sbjct: 390 LRHPWL 395

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  180 bits (460), Expect = 2e-54
 Identities = 95/343 (27%), Positives = 154/343 (44%), Gaps = 74/343 (21%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHDKGGNR 105
           K+GEG++G V +C +R+  ++VAIK      +        A+ EI +L+QL KH    N 
Sbjct: 10  KIGEGSYGVVFKCRNRDTGQIVAIKKFL-ESEDDPVIKKIALREIRMLKQL-KHP---N- 63

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            V +   F  +  + +VFE    ++   L +   R  P  LV+ I  Q L+ + F H   
Sbjct: 64  LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKHN 122

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERP 224
            IH D+KPEN +L++                          K S IK+ DFG +     P
Sbjct: 123 CIHRDVKPEN-ILIT--------------------------KHSVIKLCDFGFARLLTGP 155

Query: 225 DQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
              Y   V+TR YR+PE+++G    Y  P D+W++GC+  EL +G  L+    +++ L +
Sbjct: 156 SDYYDDEVATRWYRSPELLVG-DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYL 214

Query: 281 MERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL-----I 334
           + + LG  +P+H                         S     S +K+P  +++      
Sbjct: 215 IRKTLGDLIPRH-------------------QQVF--STNQYFSGVKIPDPEDMEPLELK 253

Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
             ++ + A  L   L+G L  DPT+RLT  + L HP+F     
Sbjct: 254 FPNISYPALGL---LKGCLHMDPTERLTCEQLLHHPYFENIRE 293

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  180 bits (460), Expect = 4e-54
 Identities = 87/345 (25%), Positives = 142/345 (41%), Gaps = 76/345 (22%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAKHDKGG 103
            +GEG++G V++C +++   +VAIK          +KK    AM EI++L+QL +H+   
Sbjct: 32  LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKK---IAMREIKLLKQL-RHE--- 84

Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
           N  V +      +    +VFE +  ++ D L           +V++   Q++  I F H 
Sbjct: 85  N-LVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCHS 142

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYE 222
             +IH D+KPEN +LVS                          +S  +K+ DFG + T  
Sbjct: 143 HNIIHRDIKPEN-ILVS--------------------------QSGVVKLCDFGFARTLA 175

Query: 223 RPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLEHL 278
            P + Y   V+TR YRAPE+++G    Y    D+W++GC++ E+  GE LF    +++ L
Sbjct: 176 APGEVYDDEVATRWYRAPELLVG-DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQL 234

Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL----- 333
             +   LG L                            +       ++LP ++       
Sbjct: 235 YHIMMCLGNLIPR------------------HQELFNKNPVFAG--VRLPEIKEREPLER 274

Query: 334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
               +     DL    +  L  DP  R    E L H FF  D   
Sbjct: 275 RYPKLSEVVIDL---AKKCLHIDPDKRPFCAELLHHDFFQMDGFA 316

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  169 bits (430), Expect = 9e-50
 Identities = 86/346 (24%), Positives = 147/346 (42%), Gaps = 85/346 (24%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLAKHDKGGNR 105
           K+GEGT+G+V +  D    E VAIK +R ++   E     A+ E+ +L++L +H    N 
Sbjct: 41  KLGEGTYGEVYKAIDTVTNETVAIKRIR-LEHEEEGVPGTAIREVSLLKEL-QHR---N- 94

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            +++++   + + + ++FE   + L  ++ KN      + +++    QL+  + F H   
Sbjct: 95  IIELKSVIHHNHRLHLIFEYAENDLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCHSRR 152

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERP 224
            +H DLKP+N LL+S                          ++  +K+ DFG +  +  P
Sbjct: 153 CLHRDLKPQN-LLLSVS---------------------DASETPVLKIGDFGLARAFGIP 190

Query: 225 DQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
            + +   + T  YR PE++LG    Y    DIWS+ CI  E+     LF     ++ L  
Sbjct: 191 IRQFTHEIITLWYRPPEILLG-SRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK 249

Query: 281 MERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP----------- 328
           +  VLG P                       WP           V  LP           
Sbjct: 250 IFEVLGLPDDT-------------------TWPG----------VTALPDWKQSFPKFRG 280

Query: 329 -RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
             L+ ++   +D    D   LL  +L  DP  R++A+ AL HP+F+
Sbjct: 281 KTLKRVLGALLDDEGLD---LLTAMLEMDPVKRISAKNALEHPYFS 323

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  168 bits (428), Expect = 1e-48
 Identities = 86/347 (24%), Positives = 148/347 (42%), Gaps = 81/347 (23%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGGNRCV 107
            +G G+FG V +    +  E+VAIK V   K++  RE     ++++++L  H    N  V
Sbjct: 61  VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKL-DHC---N-IV 110

Query: 108 QIRNWF------DYRNHICIVFEKLGSSLYDFLRKNNYRS--FPIDLVREIARQLLECIA 159
           ++R +F          ++ +V + +  ++Y   R  +      P+  V+    QL   +A
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   + H D+KP+N+LL                   D       P ++ +K+ DFGS 
Sbjct: 171 YIHSFGICHRDIKPQNLLL-------------------D-------PDTAVLKLCDFGSA 204

Query: 220 TYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                 +  +  + +R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 205 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 264

Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR-----LQ 331
            L  + +VLG   +  ++ ++ +  ++                      K P+       
Sbjct: 265 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 302

Query: 332 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            +        A  L      LL Y PT RLT  EA  H FF  D LR
Sbjct: 303 KVFRPRTPPEAIAL---CSRLLEYTPTARLTPLEACAHSFF--DELR 344

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  165 bits (420), Expect = 1e-48
 Identities = 86/351 (24%), Positives = 143/351 (40%), Gaps = 88/351 (25%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQL--AKHDK 101
           ++G G +G V +  D      VA+K VR      G      + + E+ +L++L   +H  
Sbjct: 16  EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHP- 74

Query: 102 GGN----RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
             N      V   +  D    + +VFE +   L  +L K      P + ++++ RQ L  
Sbjct: 75  --NVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 132

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + F+H  C++H DLKPEN +LV+S                             +K+ DFG
Sbjct: 133 LDFLHANCIVHRDLKPEN-ILVTSG--------------------------GTVKLADFG 165

Query: 218 -STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
            +  Y         +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +  
Sbjct: 166 LARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE 224

Query: 275 LEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL--- 330
            + L  +  ++G P                      DWP            + LPR    
Sbjct: 225 ADQLGKIFDLIGLPPED-------------------DWPR----------DVSLPRGAFP 255

Query: 331 ----QNL--IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
               + +  ++  ++ S      LL  +L ++P  R++A  AL+H +  +D
Sbjct: 256 PRGPRPVQSVVPEMEESGAQ---LLLEMLTFNPHKRISAFRALQHSYLHKD 303

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  166 bits (423), Expect = 4e-48
 Identities = 94/349 (26%), Positives = 152/349 (43%), Gaps = 86/349 (24%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGGNRCV 107
            +G G+FG V +    E  E VAIK V   K++  RE     +++++ + KH    N  V
Sbjct: 47  VIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRE-----LQIMRIV-KHP---N-VV 95

Query: 108 QIRNWF------DYRNHICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIA 159
            ++ +F           + +V E +  ++Y   R      ++ P+ L++    QLL  +A
Sbjct: 96  DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA 155

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H + + H D+KP+N+LL                           P S  +K+IDFGS 
Sbjct: 156 YIHSIGICHRDIKPQNLLL--------------------------DPPSGVLKLIDFGSA 189

Query: 220 TYERPDQNYI--VSTRHYRAPEVILGLGWTY---PCDIWSVGCILVELCTGEALFQTHEN 274
                 +  +  + +R+YRAPE+I G   T      DIWS GC++ EL  G+ LF     
Sbjct: 190 KILIAGEPNVSYICSRYYRAPELIFG--ATNYTTNIDIWSTGCVMAELMQGQPLFPGESG 247

Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR----- 329
           ++ L  + +VLG   +  +K ++ +  ++                      K P+     
Sbjct: 248 IDQLVEIIKVLGTPSREQIKTMNPNYMEH----------------------KFPQIRPHP 285

Query: 330 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
              +        A DL   +  LL Y P+ RLTA EAL HPFF  D LR
Sbjct: 286 FSKVFRPRTPPDAIDL---ISRLLEYTPSARLTAIEALCHPFF--DELR 329

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  162 bits (412), Expect = 1e-47
 Identities = 93/337 (27%), Positives = 149/337 (44%), Gaps = 71/337 (21%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLAKHDKGGNR 105
           K+GEGT+G V +  +RE  E+VA+K VR +    E    +A+ EI +L++L KH    N 
Sbjct: 9   KIGEGTYGTVFKAKNRETHEIVALKRVR-LDDDDEGVPSSALREICLLKEL-KHK---N- 62

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            V++ +       + +VFE     L  +    N      ++V+    QLL+ + F H   
Sbjct: 63  IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRN 121

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERP 224
           ++H DLKP+N LL++                              +K+ +FG +  +  P
Sbjct: 122 VLHRDLKPQN-LLINRN--------------------------GELKLANFGLARAFGIP 154

Query: 225 DQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCT-GEALFQTHENLEHLA 279
            + Y   V T  YR P+V+ G    Y    D+WS GCI  EL   G  LF  ++  + L 
Sbjct: 155 VRCYSAEVVTLWYRPPDVLFG-AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLK 213

Query: 280 MMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL--IMQ 336
            + R+LG P  +                    WP         K     P   +L  ++ 
Sbjct: 214 RIFRLLGTPTEE-------------------QWP-SMTKLPDYKPYPMYPATTSLVNVVP 253

Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
            ++ +  DL   LQ LL+ +P  R++A EAL+HP+F+
Sbjct: 254 KLNATGRDL---LQNLLKCNPVQRISAEEALQHPYFS 287

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  162 bits (413), Expect = 2e-47
 Identities = 67/350 (19%), Positives = 128/350 (36%), Gaps = 99/350 (28%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKG 102
            I  ++G G   +V +  + + K++ AIK V       +  ++   EI  L +L +    
Sbjct: 31  SILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-QQ--H 86

Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
            ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE +  +H
Sbjct: 87  SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 144

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              ++H+DLKP N L+V                               +K+IDFG     
Sbjct: 145 QHGIVHSDLKPANFLIVDGM----------------------------LKLIDFGIANQM 176

Query: 223 RPDQNYIVS-----TRHYRAPEVILGLGW-----------TYPCDIWSVGCILVELCTGE 266
           +PD   +V      T +Y  PE I  +             +   D+WS+GCIL  +  G+
Sbjct: 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236

Query: 267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 326
             FQ   N   ++ +  ++ P                     +++P+             
Sbjct: 237 TPFQQIIN--QISKLHAIIDP------------------NHEIEFPD------------- 263

Query: 327 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                       +    D   +L+  L+ DP  R++  E L HP+     
Sbjct: 264 ----------IPEKDLQD---VLKCCLKRDPKQRISIPELLAHPYVQIQT 300

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  161 bits (409), Expect = 4e-47
 Identities = 91/336 (27%), Positives = 141/336 (41%), Gaps = 71/336 (21%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLAKHDKGGNR 105
           K+GEGT+G V +  +    E  A+K +R ++K  E      + EI +L++L KH    N 
Sbjct: 9   KIGEGTYGVVYKAQNN-YGETFALKKIR-LEKEDEGIPSTTIREISILKEL-KHS---N- 61

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            V++ +    +  + +VFE L   L   L             +    QLL  IA+ HD  
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRR 120

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERP 224
           ++H DLKP+N LL++ E                            +K+ DFG +  +  P
Sbjct: 121 VLHRDLKPQN-LLINRE--------------------------GELKIADFGLARAFGIP 153

Query: 225 DQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
            + Y   + T  YRAP+V++G    Y    DIWSVGCI  E+  G  LF      + L  
Sbjct: 154 VRKYTHEIVTLWYRAPDVLMG-SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMR 212

Query: 281 MERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL--IMQH 337
           + R+LG P  +                   +WP              +         ++ 
Sbjct: 213 IFRILGTPNSK-------------------NWP-NVTELPKYDPNFTVYEPLPWESFLKG 252

Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
           +D S  D   LL  +L+ DP  R+TA++AL H +F 
Sbjct: 253 LDESGID---LLSKMLKLDPNQRITAKQALEHAYFK 285

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  160 bits (407), Expect = 3e-46
 Identities = 68/350 (19%), Positives = 129/350 (36%), Gaps = 99/350 (28%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKG 102
            I  ++G G   +V +  + E+K++ AIK V       +  ++   EI  L +L +    
Sbjct: 12  SILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-QQ--H 67

Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
            ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE +  +H
Sbjct: 68  SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 125

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              ++H+DLKP N L+V                               +K+IDFG     
Sbjct: 126 QHGIVHSDLKPANFLIVDGM----------------------------LKLIDFGIANQM 157

Query: 223 RPDQNYI-----VSTRHYRAPEVILGLG-----------WTYPCDIWSVGCILVELCTGE 266
           +PD   +     V T +Y  PE I  +             +   D+WS+GCIL  +  G+
Sbjct: 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217

Query: 267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 326
             FQ   N   ++ +  ++ P                     +++P+             
Sbjct: 218 TPFQQIIN--QISKLHAIIDP------------------NHEIEFPD------------- 244

Query: 327 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                       +    D   +L+  L+ DP  R++  E L HP+     
Sbjct: 245 ----------IPEKDLQD---VLKCCLKRDPKQRISIPELLAHPYVQIQT 281

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  159 bits (404), Expect = 3e-46
 Identities = 90/336 (26%), Positives = 148/336 (44%), Gaps = 70/336 (20%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLAKHDKGGNR 105
           K+GEGT+G V +  D  +  +VA+K +R +    E     A+ EI +L++L  H    N 
Sbjct: 28  KVGEGTYGVVYKAKDS-QGRIVALKRIR-LDAEDEGIPSTAIREISLLKEL-HHP---N- 80

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            V + +       + +VFE +   L   L +N         ++    QLL  +A  H   
Sbjct: 81  IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHR 139

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERP 224
           ++H DLKP+N LL++S+                           A+K+ DFG +  +  P
Sbjct: 140 ILHRDLKPQN-LLINSD--------------------------GALKLADFGLARAFGIP 172

Query: 225 DQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
            ++Y   V T  YRAP+V++G    Y    DIWS+GCI  E+ TG+ LF    + + L  
Sbjct: 173 VRSYTHEVVTLWYRAPDVLMG-SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPK 231

Query: 281 MERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL--IMQH 337
           +  +LG P P+                   +WP+        +   ++   +    I+  
Sbjct: 232 IFSILGTPNPR-------------------EWPQVQELPLWKQRTFQVFEKKPWSSIIPG 272

Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                 D   LL  +L +DP  R++AR+A+ HP+F 
Sbjct: 273 FCQEGID---LLSNMLCFDPNKRISARDAMNHPYFK 305

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  159 bits (405), Expect = 5e-46
 Identities = 91/348 (26%), Positives = 146/348 (41%), Gaps = 88/348 (25%)

Query: 50  KMGEGTFGQVLECWD-RERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQL--AKHDKG 102
           ++GEG +G+V +  D +     VA+K VR ++   E    + + E+ VL+ L   +H   
Sbjct: 18  EIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLETFEHP-- 74

Query: 103 GN----RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
            N      V   +  D    + +VFE +   L  +L K      P + ++++  QLL  +
Sbjct: 75  -NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 217
            F+H   ++H DLKP+N +LV+S                             IK+ DFG 
Sbjct: 134 DFLHSHRVVHRDLKPQN-ILVTSS--------------------------GQIKLADFGL 166

Query: 218 STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
           +  Y         +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF+   ++
Sbjct: 167 ARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225

Query: 276 EHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL---- 330
           + L  +  V+G P  +                   DWP            + LPR     
Sbjct: 226 DQLGKILDVIGLPGEE-------------------DWPR----------DVALPRQAFHS 256

Query: 331 ---QNL--IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
              Q +   +  +D    D   LL   L ++P  R++A  AL HP+F 
Sbjct: 257 KSAQPIEKFVTDIDELGKD---LLLKCLTFNPAKRISAYSALSHPYFQ 301

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  158 bits (402), Expect = 1e-45
 Identities = 78/340 (22%), Positives = 146/340 (42%), Gaps = 60/340 (17%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++  K+G G + +V E  +    E V +KI++ +KK +     EI++L+ L       N 
Sbjct: 39  QLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLRGGP---N- 92

Query: 106 CVQIRNWF--DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            + + +           +VFE + ++  DF  K  Y++     +R    ++L+ + + H 
Sbjct: 93  IITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHS 148

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           + ++H D+KP NV++                   D  + K       +++ID+G   +  
Sbjct: 149 MGIMHRDVKPHNVMI-------------------DHEHRK-------LRLIDWGLAEFYH 182

Query: 224 PDQNYI--VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTG-EALFQTHENLEHLA 279
           P Q Y   V++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L 
Sbjct: 183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242

Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR--LQNLIMQH 337
            + +VLG                Y+ +  ++             + +  R   +  +   
Sbjct: 243 RIAKVLGT-ED---------LYDYIDKYNIELD-----PRFNDILGRHSRKRWERFVHSE 287

Query: 338 VDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             H         L  LLRYD   RLTAREA+ HP+F    
Sbjct: 288 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 327

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  157 bits (400), Expect = 2e-45
 Identities = 91/343 (26%), Positives = 150/343 (43%), Gaps = 75/343 (21%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR-----GIKKYREAAMIEIEVLQQLAKHDKGGN 104
           K+G GT+  V +  ++     VA+K V+     G       A+ EI ++++L KH+   N
Sbjct: 12  KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPS---TAIREISLMKEL-KHE---N 64

Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNY----RSFPIDLVREIARQLLECIAF 160
             V++ +     N + +VFE + + L  ++         R   ++LV+    QLL+ +AF
Sbjct: 65  -IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 219
            H+  ++H DLKP+N LL++                          K   +K+ DFG + 
Sbjct: 124 CHENKILHRDLKPQN-LLIN--------------------------KRGQLKLGDFGLAR 156

Query: 220 TYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENL 275
            +  P   +   V T  YRAP+V++G   TY    DIWS GCIL E+ TG+ LF    + 
Sbjct: 157 AFGIPVNTFSSEVVTLWYRAPDVLMG-SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE 215

Query: 276 EHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           E L ++  ++G P                       WP            ++    ++L 
Sbjct: 216 EQLKLIFDIMGTPNES-------------------LWP-SVTKLPKYNPNIQQRPPRDLR 255

Query: 335 MQHVDHSAGDLT----HLLQGLLRYDPTDRLTAREALRHPFFT 373
                H+   L       L GLL+ +P  RL+A++AL HP+F 
Sbjct: 256 QVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFA 298

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  157 bits (400), Expect = 2e-45
 Identities = 88/335 (26%), Positives = 139/335 (41%), Gaps = 68/335 (20%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR-----GIKKYREAAMIEIEVLQQLAKHDKGGN 104
           K+GEGT+  V +   +    +VA+K +R     G       A+ E+ +L+ L KH    N
Sbjct: 9   KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPC---TAIREVSLLKDL-KHA---N 61

Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
             V + +       + +VFE L   L  +L         +  V+    QLL  +A+ H  
Sbjct: 62  -IVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQ 119

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYER 223
            ++H DLKP+N LL++                          +   +K+ DFG +     
Sbjct: 120 KVLHRDLKPQN-LLIN--------------------------ERGELKLADFGLARAKSI 152

Query: 224 PDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           P + Y   V T  YR P+++LG    Y    D+W VGCI  E+ TG  LF      E L 
Sbjct: 153 PTKTYDNEVVTLWYRPPDILLG-STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLH 211

Query: 280 MMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            + R+LG P  +                    WP   ++ E         R + L+  H 
Sbjct: 212 FIFRILGTPTEE-------------------TWPGILSNEEFKTYNYPKYRAEALL-SHA 251

Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                D   LL  LL+++  +R++A +A++HPFF 
Sbjct: 252 PRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFL 286

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  157 bits (399), Expect = 9e-45
 Identities = 69/350 (19%), Positives = 127/350 (36%), Gaps = 99/350 (28%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKG 102
            I  ++G G   +V +  + + K++ AIK V       +  ++   EI  L +L +H   
Sbjct: 59  SILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD- 116

Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             + +++ ++     +I +V E     L  +L+K   +S      +   + +LE +  +H
Sbjct: 117 --KIIRLYDYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 172

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              ++H+DLKP N L+V                               +K+IDFG     
Sbjct: 173 QHGIVHSDLKPANFLIVDGM----------------------------LKLIDFGIANQM 204

Query: 223 RPDQNYIVS-----TRHYRAPEVILGLGW-----------TYPCDIWSVGCILVELCTGE 266
           +PD   +V        +Y  PE I  +             +   D+WS+GCIL  +  G+
Sbjct: 205 QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264

Query: 267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 326
             FQ   N   ++ +  ++ P                     +++P              
Sbjct: 265 TPFQQIIN--QISKLHAIIDP------------------NHEIEFP-------------- 290

Query: 327 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                       D    DL  +L+  L+ DP  R++  E L HP+     
Sbjct: 291 ------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  154 bits (392), Expect = 5e-44
 Identities = 82/343 (23%), Positives = 145/343 (42%), Gaps = 82/343 (23%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYRE----AAMIEIEVLQQLAKHDKGG 103
            +GEG F  V +  D+   ++VAIK ++     + ++     A+ EI++LQ+L  H    
Sbjct: 17  FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHP--- 72

Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
           N  + + + F ++++I +VF+ + + L   + K+N        ++      L+ + ++H 
Sbjct: 73  N-IIGLLDAFGHKSNISLVFDFMETDLEVII-KDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYE 222
             ++H DLKP N LL+                               +K+ DFG + ++ 
Sbjct: 131 HWILHRDLKPNN-LLLDEN--------------------------GVLKLADFGLAKSFG 163

Query: 223 RPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLEHL 278
            P++ Y   V TR YRAPE++ G    Y    D+W+VGCIL EL           +L+ L
Sbjct: 164 SPNRAYTHQVVTRWYRAPELLFG-ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL 222

Query: 279 AMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL---- 333
             +   LG P  +                    WP+          +  LP         
Sbjct: 223 TRIFETLGTPTEE-------------------QWPD----------MCSLPDYVTFKSFP 253

Query: 334 ---IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
              +      +  DL  L+QGL  ++P  R+TA +AL+  +F+
Sbjct: 254 GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 296

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  151 bits (384), Expect = 3e-43
 Identities = 58/330 (17%), Positives = 101/330 (30%), Gaps = 88/330 (26%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           ++G G++G+V +   +E   + A+K         K R   + E+   +++ +H      C
Sbjct: 64  RLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP----CC 119

Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           V++   ++    + +  E  G SL          S P   V    R  L  +A +H   +
Sbjct: 120 VRLEQAWEEGGILYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGL 178

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H D+KP N+ L                                 K+ DFG         
Sbjct: 179 VHLDVKPANIFL---------------------------GPRGRCKLGDFGLLVELGTAG 211

Query: 226 QNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
                     Y APE++ G  +    D++S+G  ++E+     L    E  + L     +
Sbjct: 212 AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL-RQGYL 269

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
                  +                        S E                         
Sbjct: 270 PPEFTAGL------------------------SSE------------------------- 280

Query: 345 LTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           L  +L  +L  DP  R TA   L  P   +
Sbjct: 281 LRSVLVMMLEPDPKLRATAEALLALPVLRQ 310

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  152 bits (386), Expect = 4e-43
 Identities = 91/348 (26%), Positives = 147/348 (42%), Gaps = 66/348 (18%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++    G+GTFG V    ++     VAIK V    ++      E++++Q L       N 
Sbjct: 26  QVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF---RNRELQIMQDL-AVLHHPN- 80

Query: 106 CVQIRNWF-----DYRNHIC--IVFEKLGSSLYDFLRKNNYR--SFPIDLVREIARQLLE 156
            VQ++++F       R  I   +V E +  +L+   R    R  + P  L++    QL+ 
Sbjct: 81  IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIR 140

Query: 157 CIAFMHDLCM--IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
            I  +H   +   H D+KP NVL+                   +            +K+ 
Sbjct: 141 SIGCLHLPSVNVCHRDIKPHNVLV-------------------N-------EADGTLKLC 174

Query: 215 DFGSTTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQT 271
           DFGS     P +  +  + +R+YRAPE+I G   +T   DIWSVGCI  E+  GE +F+ 
Sbjct: 175 DFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRG 234

Query: 272 HENLEHLAMMERVLGPLPQHMLKRVD-RHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL 330
             +   L  + RVLG   + +L++++  H +  +                     K    
Sbjct: 235 DNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYN------------------SKGIPW 276

Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            N+   H    A +   LL  LL+Y P +R+   EAL HP+F  D L 
Sbjct: 277 SNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF--DELH 322

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  148 bits (375), Expect = 5e-42
 Identities = 67/337 (19%), Positives = 119/337 (35%), Gaps = 76/337 (22%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD--------- 100
            +G+G FGQV++  +       AIK +R  ++     + E+ +L  L  H          
Sbjct: 13  VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-NHQYVVRYYAAW 71

Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                 V+       ++ + I  E     +LYD +   N  +   D    + RQ+LE ++
Sbjct: 72  LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALS 130

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF---KRMPKSSAIKVIDF 216
           ++H   +IH DLKP N+ +  S  +K+ D             F   K + +S  I  +D 
Sbjct: 131 YIHSQGIIHRDLKPMNIFIDESRNVKIGD-------------FGLAKNVHRSLDILKLDS 177

Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENL 275
            +      +    + T  Y A EV+ G G      D++S+G I  E+      F T    
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP---FSTGMER 234

Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 335
            ++                       K +R   +++P      +           + +I 
Sbjct: 235 VNIL----------------------KKLRSVSIEFPPDFDDNKM-------KVEKKIIR 265

Query: 336 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                           L+ +DP  R  AR  L   + 
Sbjct: 266 L---------------LIDHDPNKRPGARTLLNSGWL 287

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  147 bits (374), Expect = 1e-41
 Identities = 79/328 (24%), Positives = 128/328 (39%), Gaps = 74/328 (22%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN 111
           GEG+F    +C  ++  +  A+KI+   K+       EI  L+    H    N  V++  
Sbjct: 20  GEGSFSICRKCVHKKSNQAFAVKIIS--KRMEANTQKEITALKLCEGHP---N-IVKLHE 73

Query: 112 WFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTD 170
            F  + H  +V E L G  L++  R    + F       I R+L+  ++ MHD+ ++H D
Sbjct: 74  VFHDQLHTFLVMELLNGGELFE--RIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRD 131

Query: 171 LKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY-- 228
           LKPEN+L                              +  IK+IDFG    + PD     
Sbjct: 132 LKPENLLFTDEN------------------------DNLEIKIIDFGFARLKPPDNQPLK 167

Query: 229 -IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGP 287
               T HY APE++   G+   CD+WS+G IL  + +G+  FQ+H+          +   
Sbjct: 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD--------RSLTCT 219

Query: 288 LPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH 347
               ++K+        +++G   +   A                     +V   A D   
Sbjct: 220 SAVEIMKK--------IKKGDFSFEGEAWK-------------------NVSQEAKD--- 249

Query: 348 LLQGLLRYDPTDRLTAREALRHPFFTRD 375
           L+QGLL  DP  RL       + +    
Sbjct: 250 LIQGLLTVDPNKRLKMSGLRYNEWLQDG 277

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  150 bits (380), Expect = 2e-41
 Identities = 67/353 (18%), Positives = 127/353 (35%), Gaps = 85/353 (24%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
                +G G+ G V+      +   VA+K +     + + A++EI++L +   H      
Sbjct: 18  VSEKILGYGSSGTVVFQ-GSFQGRPVAVKRML--IDFCDIALMEIKLLTESDDH----PN 70

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE-----IARQLLECIAF 160
            ++          + I  E    +L D +   N     + L +E     + RQ+   +A 
Sbjct: 71  VIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H L +IH DLKP+N+L+ +S               + ++  +   ++  I + DFG   
Sbjct: 131 LHSLKIIHRDLKPQNILVSTSS--------------RFTADQQTGAENLRILISDFGLCK 176

Query: 221 YERPDQNYIVSTRH-------YRAPEVILGLGW-------TYPCDIWSVGCIL-VELCTG 265
                Q+   +  +       +RAPE++            T   DI+S+GC+    L  G
Sbjct: 177 KLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236

Query: 266 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM 325
           +  F                                           + +     I+ + 
Sbjct: 237 KHPF-----------------------------------------GDKYSRESNIIRGIF 255

Query: 326 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            L  ++ L  + +   A D   L+  ++ +DP  R TA + LRHP F     +
Sbjct: 256 SLDEMKCLHDRSLIAEATD---LISQMIDHDPLKRPTAMKVLRHPLFWPKSKK 305

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  147 bits (373), Expect = 2e-41
 Identities = 69/334 (20%), Positives = 122/334 (36%), Gaps = 78/334 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++   +G G++     C  +      A+KI   I K +     EIE+L +  +H    N 
Sbjct: 25  EVKEDIGVGSYSVCKRCIHKATNMEFAVKI---IDKSKRDPTEEIEILLRYGQHP---N- 77

Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            + +++ +D   ++ +V E + G  L D + +   + F       +   + + + ++H  
Sbjct: 78  IITLKDVYDDGKYVYVVTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQ 135

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            ++H DLKP N+L V                              +I++ DFG     R 
Sbjct: 136 GVVHRDLKPSNILYVDES-----------------------GNPESIRICDFGFAKQLRA 172

Query: 225 DQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
           +         T ++ APEV+   G+   CDIWS+G +L  + TG   F    +     ++
Sbjct: 173 ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL 232

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            R+                      G+     G  +                    V  +
Sbjct: 233 ARIG--------------------SGKFSLSGGYWN-------------------SVSDT 253

Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
           A D   L+  +L  DP  RLTA   LRHP+    
Sbjct: 254 AKD---LVSKMLHVDPHQRLTAALVLRHPWIVHW 284

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  147 bits (373), Expect = 5e-41
 Identities = 83/368 (22%), Positives = 151/368 (41%), Gaps = 83/368 (22%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY--RE------------------- 84
            +   +G G+FG V E +D E  +  A+K V    +Y  RE                   
Sbjct: 10  SLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYF 69

Query: 85  ---------AAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLR 135
                          +  +   K++   N    +        ++ ++ E +  +L+  L+
Sbjct: 70  YTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLK 129

Query: 136 --KNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL 193
               + RS P++L+     QL   + F+H L + H D+KP+N+L+               
Sbjct: 130 SFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV--------------- 174

Query: 194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPC 250
                        K + +K+ DFGS     P +  +  + +R YRAPE++LG   +T   
Sbjct: 175 -----------NSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSI 223

Query: 251 DIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD 310
           D+WS+GC+  EL  G+ LF    +++ L  + +++G   +  + R++ H           
Sbjct: 224 DLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPH----------- 272

Query: 311 WPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 370
                 +     ++      + ++ +     A D   LL+ +LRY+P  R+   EA+ HP
Sbjct: 273 -----YTEVRFPTLKAKD-WRKILPEGTPSLAID---LLEQILRYEPDLRINPYEAMAHP 323

Query: 371 FFTRDHLR 378
           FF  DHLR
Sbjct: 324 FF--DHLR 329

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  145 bits (368), Expect = 7e-41
 Identities = 72/358 (20%), Positives = 130/358 (36%), Gaps = 85/358 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIK------IVRGIKKYREAAMIEIEVLQQLAKH 99
                +G G  G V    D +  + VAIK              RE     I+++++L  H
Sbjct: 14  MDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALRE-----IKIIRRL-DH 67

Query: 100 D----------KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE 149
           D            G++           N + IV E + + L + L +        +  R 
Sbjct: 68  DNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLE---EHARL 124

Query: 150 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 209
              QLL  + ++H   ++H DLKP N+ + + +                           
Sbjct: 125 FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDL-------------------------- 158

Query: 210 AIKVIDFG---STTYERPDQNYI---VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVEL 262
            +K+ DFG           + ++   + T+ YR+P ++L    +T   D+W+ GCI  E+
Sbjct: 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 218

Query: 263 CTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR----RGRLDWPEGAASR 318
            TG+ LF     LE + ++   +  + +   + +      Y+R           +     
Sbjct: 219 LTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQ----- 273

Query: 319 ESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                          ++  +   A D    L+ +L + P DRLTA EAL HP+ +   
Sbjct: 274 ---------------LLPGISREAVD---FLEQILTFSPMDRLTAEEALSHPYMSIYS 313

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score =  146 bits (371), Expect = 1e-40
 Identities = 85/343 (24%), Positives = 158/343 (46%), Gaps = 30/343 (8%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMI--EIEVLQQLAKHDKG 102
           ++  K+G+G +G V +  DR   E+VA+K I    +   +A     EI +L +L+ H+  
Sbjct: 12  ELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE-- 69

Query: 103 GNRCVQIRNWF--DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
            N  V + N    D    + +VF+ + + L+  +R N          + +  QL++ I +
Sbjct: 70  -N-IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEP---VHKQYVVYQLIKVIKY 124

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDY-----KSSLHTPKDSSYFKRMPKSSAIKVID 215
           +H   ++H D+KP N+LL +  ++KV D+       ++    ++        +       
Sbjct: 125 LHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184

Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 274
              T Y        V+TR YRAPE++LG   +T   D+WS+GCIL E+  G+ +F     
Sbjct: 185 PILTDY--------VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236

Query: 275 LEHLAMMERVLGPLPQHMLKRVD-RHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 333
           +  L  +  V+       ++ +    A+  +   +       +++  I +  K   L+  
Sbjct: 237 MNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKIN 296

Query: 334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                +  A D   LL  LL+++P  R++A +AL+HPF +  H
Sbjct: 297 PKADCNEEALD---LLDKLLQFNPNKRISANDALKHPFVSIFH 336

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  147 bits (372), Expect = 2e-40
 Identities = 62/339 (18%), Positives = 117/339 (34%), Gaps = 86/339 (25%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
            +G G  G ++          VA+K +  + +    A  E+++L++  +H    N  ++ 
Sbjct: 31  VLGHGAEGTIV-YRGMFDNRDVAVKRI--LPECFSFADREVQLLRESDEHP---N-VIRY 83

Query: 110 RNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHT 169
                 R    I  E   ++L +++ + ++    ++    + +Q    +A +H L ++H 
Sbjct: 84  FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLE-PITLLQQTTSGLAHLHSLNIVHR 142

Query: 170 DLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY- 228
           DLKP N+L+                 P      K         + DFG        ++  
Sbjct: 143 DLKPHNILISM---------------PNAHGKIK-------AMISDFGLCKKLAVGRHSF 180

Query: 229 -----IVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 279
                +  T  + APE++        TY  DI+S GC+    +  G   F          
Sbjct: 181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFG--------- 231

Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
                         K + R A   +    LD                         +H D
Sbjct: 232 --------------KSLQRQANILLGACSLDCLH--------------------PEKHED 257

Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
             A +   L++ ++  DP  R +A+  L+HPFF     +
Sbjct: 258 VIARE---LIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQ 293

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  144 bits (365), Expect = 2e-40
 Identities = 58/347 (16%), Positives = 111/347 (31%), Gaps = 66/347 (19%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGG 103
            +   +G+G    V     ++  ++ AIK+       +  +  M E EVL++L  H    
Sbjct: 12  LLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHK--- 67

Query: 104 NRCVQIRNWFDYRN--HICIVFEKL-GSSLYDFLRKN-NYRSFPIDLVREIARQLLECIA 159
              V++    +     H  ++ E     SLY  L +  N    P      + R ++  + 
Sbjct: 68  -NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            + +  ++H ++KP N++ V  E                          S  K+ DFG+ 
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGE-----------------------DGQSVYKLTDFGAA 163

Query: 220 TYERPDQNY--IVSTRHYRAPEVILGLGWTYP--------CDIWSVGCILVELCTGEALF 269
                D+ +  +  T  Y  P++                  D+WS+G       TG   F
Sbjct: 164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223

Query: 270 QTHENLEHLA-MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 328
           +  E       +M +++   P   +  V +        G +DW        S+   ++  
Sbjct: 224 RPFEGPRRNKEVMYKIITGKPSGAISGVQK-----AENGPIDWSGDMPVSCSLSRGLQ-- 276

Query: 329 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                           LT +L  +L  D        +          
Sbjct: 277 --------------VLLTPVLANILEADQEKCWGFDQFFAETSDILH 309

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  143 bits (363), Expect = 9e-40
 Identities = 80/359 (22%), Positives = 139/359 (38%), Gaps = 97/359 (27%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHDKGGN- 104
           K+G+GTFG+V +   R+  + VA+K V  ++  +E     A+ EI++LQ L KH+   N 
Sbjct: 24  KIGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLL-KHE---NV 78

Query: 105 ---RCV---QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
                +   +   +   +  I +VF+     L   L     + F +  ++ + + LL  +
Sbjct: 79  VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQMLLNGL 137

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 217
            ++H   ++H D+K  NVL                           + +   +K+ DFG 
Sbjct: 138 YYIHRNKILHRDMKAANVL---------------------------ITRDGVLKLADFGL 170

Query: 218 ----STTYERPDQNY--IVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQ 270
               S         Y   V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q
Sbjct: 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 230

Query: 271 THENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP- 328
            +     LA++ ++ G   P+                    WP           V     
Sbjct: 231 GNTEQHQLALISQLCGSITPE-------------------VWPN----------VDNYEL 261

Query: 329 ------------RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                       ++++ +  +V         L+  LL  DP  R+ + +AL H FF  D
Sbjct: 262 YEKLELVKGQKRKVKDRLKAYVRDPYA--LDLIDKLLVLDPAQRIDSDDALNHDFFWSD 318

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  141 bits (358), Expect = 1e-39
 Identities = 56/332 (16%), Positives = 109/332 (32%), Gaps = 71/332 (21%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           K+G G FG V +C  R    + AIK  +         + A+ E+     L +H    +  
Sbjct: 18  KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHS---H-V 73

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNN--YRSFPIDLVREIARQLLECIAFMHD 163
           V+  + +   +H+ I  E   G SL D + +N      F    ++++  Q+   + ++H 
Sbjct: 74  VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 133

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           + ++H D+KP N+ +  +        +        +            K+ D G  T   
Sbjct: 134 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN--------KVMFKIGDLGHVT-RI 184

Query: 224 PDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
                      + A EV+          DI+++   +V     E L +  +    +    
Sbjct: 185 SSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQ-- 242

Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
              G LP+                                    +P             +
Sbjct: 243 ---GRLPR------------------------------------IP----------QVLS 253

Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            + T LL+ ++  DP  R +A   ++H     
Sbjct: 254 QEFTELLKVMIHPDPERRPSAMALVKHSVLLS 285

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  145 bits (368), Expect = 2e-39
 Identities = 77/336 (22%), Positives = 138/336 (41%), Gaps = 83/336 (24%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI-EIEVLQQLAKHDKG 102
           +   K+G G +G+VL C D+      AIKI+    +     + ++ E+ VL+ L  H   
Sbjct: 40  QRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-DHP-- 96

Query: 103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
            N  +++ ++F+ + +  +V E   G  L+D +       F       I +Q+L  + ++
Sbjct: 97  -N-IMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK--FNEVDAAVIIKQVLSGVTYL 152

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   ++H DLKPEN+LL S E                        K + IK++DFG +  
Sbjct: 153 HKHNIVHRDLKPENLLLESKE------------------------KDALIKIVDFGLSAV 188

Query: 222 ERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
               +     + T +Y APEV+    +   CD+WS+G IL  L  G   F    + E   
Sbjct: 189 FENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQE--- 244

Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
           ++ +V                     +G+  +                        ++V 
Sbjct: 245 ILRKVE--------------------KGKYTFDSPE-------------------WKNVS 265

Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
             A D   L++ +L++D   R++A++AL HP+    
Sbjct: 266 EGAKD---LIKQMLQFDSQRRISAQQALEHPWIKEM 298

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  144 bits (365), Expect = 4e-39
 Identities = 82/337 (24%), Positives = 143/337 (42%), Gaps = 84/337 (24%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHDK 101
           K    +G+G+FG+V+ C D+   +  A+K++       K  +E+ + E+++L+QL  H  
Sbjct: 29  KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHP- 86

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
             N  +++  +F+ + +  +V E   G  L+D +       F       I RQ+L  I +
Sbjct: 87  --N-IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITY 141

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           MH   ++H DLKPEN+LL S                          K + I++IDFG +T
Sbjct: 142 MHKNKIVHRDLKPENLLLESKS------------------------KDANIRIIDFGLST 177

Query: 221 YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
           +    +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F      +  
Sbjct: 178 HFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD-- 234

Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            ++++V                     +G+  +                        + V
Sbjct: 235 -ILKKVE--------------------KGKYTFELPQ-------------------WKKV 254

Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
             SA D   L++ +L Y P+ R++AR+AL H +    
Sbjct: 255 SESAKD---LIRKMLTYVPSMRISARDALDHEWIQTY 288

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  140 bits (356), Expect = 5e-39
 Identities = 64/334 (19%), Positives = 121/334 (36%), Gaps = 79/334 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
            I   +G G FG V  C +   K+    K V+     +     EI +L    +H      
Sbjct: 8   MIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-RH----RN 62

Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            + +   F+    + ++FE + G  +++ +  + +       +     Q+ E + F+H  
Sbjct: 63  ILHLHESFESMEELVMIFEFISGLDIFERINTSAF-ELNEREIVSYVHQVCEALQFLHSH 121

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            + H D++PEN++  +                          +SS IK+I+FG     +P
Sbjct: 122 NIGHFDIRPENIIYQT-------------------------RRSSTIKIIEFGQARQLKP 156

Query: 225 DQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
             N+  + +   Y APEV      +   D+WS+G ++  L +G   F    N +   ++E
Sbjct: 157 GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ---IIE 213

Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
            ++                         + E A                    + +   A
Sbjct: 214 NIM--------------------NAEYTFDEEA-------------------FKEISIEA 234

Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
            D    +  LL  +   R+TA EAL+HP+  +  
Sbjct: 235 MD---FVDRLLVKERKSRMTASEALQHPWLKQKI 265

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  142 bits (360), Expect = 5e-39
 Identities = 71/336 (21%), Positives = 130/336 (38%), Gaps = 90/336 (26%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN 111
           G G  G+VL+ +++  +E  A+K+++   K R     E+E+  + ++     +  V+I +
Sbjct: 71  GLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCP---H-IVRIVD 122

Query: 112 WFD----YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
            ++     R  + IV E L G  L+  ++    ++F      EI + + E I ++H + +
Sbjct: 123 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 182

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
            H D+KPEN+L  S                           ++ +K+ DFG         
Sbjct: 183 AHRDVKPENLLYTSKR------------------------PNAILKLTDFGFAKETTSHN 218

Query: 227 NY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
           +      T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L         
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------- 269

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESIKSVMKLPRLQNLIMQHVD 339
              +   M  R        +R G+ +     W                          V 
Sbjct: 270 --AISPGMKTR--------IRMGQYEFPNPEWS------------------------EVS 295

Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                   L++ LL+ +PT R+T  E + HP+  + 
Sbjct: 296 EEVKM---LIRNLLKTEPTQRMTITEFMNHPWIMQS 328

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  142 bits (359), Expect = 7e-39
 Identities = 84/369 (22%), Positives = 144/369 (39%), Gaps = 89/369 (24%)

Query: 45  DKIHSKMGEGTFGQVLECWDRERK--EMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHD 100
           +    K+G GT+G V +   ++ K  +  A+K +   GI     +A  EI +L++L KH 
Sbjct: 23  EYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS---MSACREIALLREL-KHP 78

Query: 101 KGGNRCVQIRNWFDYRNHICI--VFE-------KLGSSLYDFLRKNNYRSFPIDLVREIA 151
              N  + ++  F       +  +F+        +                P  +V+ + 
Sbjct: 79  ---N-VISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLL 134

Query: 152 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
            Q+L+ I ++H   ++H DLKP N +LV  E                       P+   +
Sbjct: 135 YQILDGIHYLHANWVLHRDLKPAN-ILVMGEG----------------------PERGRV 171

Query: 212 KVIDFG-STTYERPDQNY-----IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELC 263
           K+ D G +  +  P +       +V T  YRAPE++LG    Y    DIW++GCI  EL 
Sbjct: 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG-ARHYTKAIDIWAIGCIFAELL 230

Query: 264 TGEALFQ---------THENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPE 313
           T E +F             + + L  +  V+G P  +                   DW +
Sbjct: 231 TSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADK-------------------DWED 271

Query: 314 -------GAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA 366
                      ++  ++      L   + +H         HLLQ LL  DP  R+T+ +A
Sbjct: 272 IKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 331

Query: 367 LRHPFFTRD 375
           ++ P+F  D
Sbjct: 332 MQDPYFLED 340

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  143 bits (362), Expect = 9e-39
 Identities = 81/350 (23%), Positives = 138/350 (39%), Gaps = 70/350 (20%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREA--AMIEIEVLQQLAKHDKG 102
           +    +G G  G V   +D      VAIK + R  +    A  A  E+ +++ +  H   
Sbjct: 65  QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHK-- 121

Query: 103 GNRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
            N  + + N F      +    + +V E + ++L   ++         + +  +  Q+L 
Sbjct: 122 -N-IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLC 175

Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            I  +H   +IH DLKP N+++ S                              +K++DF
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSD---------------------------CTLKILDF 208

Query: 217 GSTTYERPDQN---YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
           G             Y V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   +
Sbjct: 209 GLARTAGTSFMMTPY-VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 267

Query: 274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR----RGRLDWPE---GAASRESIKSVMK 326
            ++    +   LG      +K++      YV        L +P+    +           
Sbjct: 268 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS----------- 316

Query: 327 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
           L    +   +     A D   LL  +L  DP  R++  +AL+HP+    +
Sbjct: 317 LFPADSEHNKLKASQARD---LLSKMLVIDPAKRISVDDALQHPYINVWY 363

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  139 bits (353), Expect = 1e-38
 Identities = 69/346 (19%), Positives = 120/346 (34%), Gaps = 87/346 (25%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           GEG   +V  C +    +  A+KI+       R     E+E+L Q   H    N  +++ 
Sbjct: 22  GEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHR---N-VLELI 77

Query: 111 NWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHT 169
            +F+  +   +VFEK+ G S+   + K   R F       + + +   + F+H+  + H 
Sbjct: 78  EFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHR 135

Query: 170 DLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY- 228
           DLKPEN+L                             + S +K+ DF   +  + + +  
Sbjct: 136 DLKPENILCEHPN------------------------QVSPVKICDFDLGSGIKLNGDCS 171

Query: 229 ---------IVSTRHYRAPEVILGLGWTY-----PCDIWSVGCILVELCTGEALFQTHEN 274
                       +  Y APEV+             CD+WS+G IL  L +G   F     
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCG 231

Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESIKSVMKLPR 329
            +               + +         ++ G+ +     W                  
Sbjct: 232 SDCGWDRGEACPACQNMLFES--------IQEGKYEFPDKDWA----------------- 266

Query: 330 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                  H+  +A D   L+  LL  D   RL+A + L+HP+    
Sbjct: 267 -------HISCAAKD---LISKLLVRDAKQRLSAAQVLQHPWVQGC 302

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  142 bits (361), Expect = 2e-38
 Identities = 82/336 (24%), Positives = 137/336 (40%), Gaps = 83/336 (24%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHDKG 102
            I   +G+G+FG+VL+C DR  ++  A+K++       K     + E+E+L++L  H   
Sbjct: 25  NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHP-- 81

Query: 103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
            N  +++    +  +   IV E   G  L+D + K     F       I +Q+   I +M
Sbjct: 82  -N-IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYM 137

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   ++H DLKPEN+LL S E                        K   IK+IDFG +T 
Sbjct: 138 HKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGLSTC 173

Query: 222 ERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
            + +      + T +Y APEV+ G  +   CD+WS G IL  L +G   F      +   
Sbjct: 174 FQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--- 229

Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
           +++RV                      G+  +                        + + 
Sbjct: 230 ILKRVE--------------------TGKYAFDLPQ-------------------WRTIS 250

Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
             A D   L++ +L + P+ R+TA + L HP+  + 
Sbjct: 251 DDAKD---LIRKMLTFHPSLRITATQCLEHPWIQKY 283

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  140 bits (355), Expect = 2e-38
 Identities = 73/335 (21%), Positives = 130/335 (38%), Gaps = 80/335 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGN 104
            I  ++G G FG V  C ++    +   K +       +     EI ++ QL  H     
Sbjct: 54  DILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHP---- 108

Query: 105 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
           + + + + F+ +  + ++ E L G  L+D +   +Y       V    RQ  E +  MH+
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY-KMSEAEVINYMRQACEGLKHMHE 167

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             ++H D+KPEN++  +                          K+S++K+IDFG  T   
Sbjct: 168 HSIVHLDIKPENIMCET-------------------------KKASSVKIIDFGLATKLN 202

Query: 224 PDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
           PD+      +T  + APE++      +  D+W++G +   L +G + F   ++LE    +
Sbjct: 203 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE---TL 259

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
           + V                     R   ++ E A                      V   
Sbjct: 260 QNVK--------------------RCDWEFDEDA-------------------FSSVSPE 280

Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
           A D    ++ LL+ +P  RLT  +AL HP+   DH
Sbjct: 281 AKD---FIKNLLQKEPRKRLTVHDALEHPWLKGDH 312

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  139 bits (352), Expect = 2e-38
 Identities = 71/385 (18%), Positives = 125/385 (32%), Gaps = 129/385 (33%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAKH 99
            +   +G+G++G V    + + + + AIKI+          K  E    E+ ++++L  H
Sbjct: 29  HLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HH 87

Query: 100 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYR------------------ 140
                   ++   ++   +IC+V E   G  L D L                        
Sbjct: 88  ----PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCP 143

Query: 141 --------------------SFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS 180
                                    L+  I RQ+   + ++H+  + H D+KPEN L  +
Sbjct: 144 ECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFST 203

Query: 181 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPDQNY------IVSTR 233
           ++                         S  IK++DFG S  + + +            T 
Sbjct: 204 NK-------------------------SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTP 238

Query: 234 HYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQH 291
           ++ APEV+     +Y   CD WS G +L  L  G   F    N      + +VL      
Sbjct: 239 YFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFP-GVN--DADTISQVL------ 289

Query: 292 MLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG 351
                           +L +     +                    +   A D   LL  
Sbjct: 290 --------------NKKLCFENPNYN-------------------VLSPLARD---LLSN 313

Query: 352 LLRYDPTDRLTAREALRHPFFTRDH 376
           LL  +  +R  A  AL+HP+ ++  
Sbjct: 314 LLNRNVDERFDAMRALQHPWISQFS 338

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  137 bits (348), Expect = 3e-38
 Identities = 64/356 (17%), Positives = 104/356 (29%), Gaps = 101/356 (28%)

Query: 36  TYIVFSAFAD--KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVL 93
            + V   F    K    +G G FGQV +   R   +   IK    +K   E A  E++ L
Sbjct: 2   AHTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKR---VKYNNEKAEREVKAL 58

Query: 94  QQLAKH------------DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYR 140
            +L  H                       +       + I  E     +L  ++ K    
Sbjct: 59  AKL-DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 117

Query: 141 SFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS 200
                L  E+  Q+ + + ++H   +I+ DLKP N+ LV                     
Sbjct: 118 KLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV--------------------- 156

Query: 201 YFKRMPKSSAIKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCI 258
                  +  +K+ DFG  T  + D        T  Y +PE I    +    D++++G I
Sbjct: 157 ------DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLI 210

Query: 259 LVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASR 318
           L EL     +  T           R  G +                             +
Sbjct: 211 LAELLH---VCDTAFETSKFFTDLR-DGIISDIF------------------------DK 242

Query: 319 ESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           +           + L+ +               LL   P DR    E LR     +
Sbjct: 243 K----------EKTLLQK---------------LLSKKPEDRPNTSEILRTLTVWK 273

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  139 bits (352), Expect = 3e-38
 Identities = 77/358 (21%), Positives = 124/358 (34%), Gaps = 119/358 (33%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR---------EAAMIEIEVLQQL 96
           ++   +G+G F  V  C +RE  +  A+KI   +   +         E    E  +   L
Sbjct: 27  ELCEVIGKGPFSVVRRCINRETGQQFAVKI---VDVAKFTSSPGLSTEDLKREASICHML 83

Query: 97  AKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFL--RKNNYRSFPIDLVREIARQ 153
            KH    +  V++   +     + +VFE + G+ L   +  R +    +   +     RQ
Sbjct: 84  -KHP---H-IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138

Query: 154 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 213
           +LE + + HD  +IH D+KP  VLL S E                         S+ +K+
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVLLASKE------------------------NSAPVKL 174

Query: 214 IDFG-STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC------ 263
             FG +             V T H+ APEV+    +  P D+W  G IL + L       
Sbjct: 175 GGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY 234

Query: 264 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAAS 317
            T E LF+                                 + +G+       W      
Sbjct: 235 GTKERLFEG--------------------------------IIKGKYKMNPRQWS----- 257

Query: 318 RESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                              H+  SA D   L++ +L  DP +R+T  EAL HP+    
Sbjct: 258 -------------------HISESAKD---LVRRMLMLDPAERITVYEALNHPWLKER 293

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  142 bits (360), Expect = 3e-38
 Identities = 72/347 (20%), Positives = 134/347 (38%), Gaps = 94/347 (27%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--------------GIKKYREAAMIEIE 91
               K+G G +G+VL C ++      AIK+++               I+K+ E    EI 
Sbjct: 39  FKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEIS 98

Query: 92  VLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREI 150
           +L+ L  H    N  +++ + F+ + +  +V E   G  L++ +   +   F       I
Sbjct: 99  LLKSL-DHP---N-IIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--FDECDAANI 151

Query: 151 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 210
            +Q+L  I ++H   ++H D+KPEN+LL +                              
Sbjct: 152 MKQILSGICYLHKHNIVHRDIKPENILLENKN------------------------SLLN 187

Query: 211 IKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 268
           IK++DFG +++   D      + T +Y APEV+    +   CD+WS G I+  L  G   
Sbjct: 188 IKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246

Query: 269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 328
           F    + +   ++++V                     +G+  +                 
Sbjct: 247 FGGQNDQD---IIKKVE--------------------KGKYYFDFND------------- 270

Query: 329 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                  +++   A +   L++ +L YD   R TA EAL   +  + 
Sbjct: 271 ------WKNISDEAKE---LIKLMLTYDYNKRCTAEEALNSRWIKKY 308

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  138 bits (350), Expect = 3e-38
 Identities = 66/329 (20%), Positives = 112/329 (34%), Gaps = 79/329 (24%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           G G F  V +C  +   +  A K +   R  +  R   + EI VL+          R + 
Sbjct: 38  GRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCP----RVIN 93

Query: 109 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +   ++  + I ++ E   G  ++             + V  + +Q+LE + ++H   ++
Sbjct: 94  LHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIV 153

Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DLKP+N+LL S                              IK++DFG +        
Sbjct: 154 HLDLKPQNILLSSIY------------------------PLGDIKIVDFGMSRKIGHACE 189

Query: 228 Y--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
              I+ T  Y APE++     T   D+W++G I   L T  + F   +N E       + 
Sbjct: 190 LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE---TYLNIS 246

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                               +  +D+ E                        V   A D 
Sbjct: 247 --------------------QVNVDYSEET-------------------FSSVSQLATD- 266

Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFTR 374
              +Q LL  +P  R TA   L H +  +
Sbjct: 267 --FIQSLLVKNPEKRPTAEICLSHSWLQQ 293

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  137 bits (347), Expect = 1e-37
 Identities = 74/331 (22%), Positives = 126/331 (38%), Gaps = 81/331 (24%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN 111
           G G  G+VLEC+ R   +  A+K++    K R+    E++   Q +      +  V I +
Sbjct: 38  GLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVDHHWQASGGP---H-IVCILD 89

Query: 112 WFD----YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
            ++     +  + I+ E + G  L+  +++   ++F      EI R +   I F+H   +
Sbjct: 90  VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI 149

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
            H D+KPEN+L  S E                        K + +K+ DFG +    +  
Sbjct: 150 AHRDVKPENLLYTSKE------------------------KDAVLKLTDFGFAKETTQNA 185

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT-HENLEHLAMMERV 284
                 T +Y APEV+    +   CD+WS+G I+  L  G   F +         M  R 
Sbjct: 186 LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR- 244

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
                              +R G+  +P                         V   A  
Sbjct: 245 -------------------IRLGQYGFPNPE-------------------WSEVSEDAKQ 266

Query: 345 LTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
              L++ LL+ DPT+RLT  + + HP+  + 
Sbjct: 267 ---LIRLLLKTDPTERLTITQFMNHPWINQS 294

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  138 bits (349), Expect = 1e-37
 Identities = 82/344 (23%), Positives = 139/344 (40%), Gaps = 58/344 (16%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREA--AMIEIEVLQQLAKHDKG 102
           +    +G G  G V   +D   +  VAIK + R  +    A  A  E+ +++ +  H   
Sbjct: 28  QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHK-- 84

Query: 103 GNRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
            N  + + N F      +    + IV E + ++L   ++           +  +  Q+L 
Sbjct: 85  -N-IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER----MSYLLYQMLC 138

Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            I  +H   +IH DLKP N+++ S   +K+ D+   L     +S+               
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF--GLARTAGTSFM-------------- 182

Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
             T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   ++++
Sbjct: 183 -MTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 233

Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVR----RGRLDWPEGAASRESIKSVMKLPRLQN 332
               +   LG      +K++      YV          + +             L    +
Sbjct: 234 QWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEK--------LFPDVLFPADS 285

Query: 333 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
              +     A D   LL  +L  D + R++  EAL+HP+    +
Sbjct: 286 EHNKLKASQARD---LLSKMLVIDASKRISVDEALQHPYINVWY 326

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  141 bits (357), Expect = 1e-37
 Identities = 74/335 (22%), Positives = 124/335 (37%), Gaps = 80/335 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLAKHDKGGN 104
            IH ++G G FG V    +R      A K V    +  +E    EI+ +  L +H     
Sbjct: 160 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPT--- 215

Query: 105 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             V + + F+  N + +++E + G  L++ +   +      D   E  RQ+ + +  MH+
Sbjct: 216 -LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHE 273

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              +H DLKPEN++  +                          +S+ +K+IDFG T +  
Sbjct: 274 NNYVHLDLKPENIMFTT-------------------------KRSNELKLIDFGLTAHLD 308

Query: 224 PDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
           P Q+      T  + APEV  G    Y  D+WSVG +   L +G + F    + E    +
Sbjct: 309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE---TL 365

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
             V                         +  + A                      +   
Sbjct: 366 RNVK--------------------SCDWNMDDSA-------------------FSGISED 386

Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             D    ++ LL  DP  R+T  +AL HP+ T  +
Sbjct: 387 GKD---FIRKLLLADPNTRMTIHQALEHPWLTPGN 418

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score =  137 bits (347), Expect = 2e-37
 Identities = 90/360 (25%), Positives = 151/360 (41%), Gaps = 61/360 (16%)

Query: 31  MFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-- 88
           M   I Y + S F  ++ S +GEG +G V     +   E+VAIK +    K   A     
Sbjct: 1   MPKRIVYNISSDF--QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR 58

Query: 89  EIEVLQQLAKHDKGGNRCVQIRNWF-----DYRNHICIVFEKLGSSLYDFLRKNNYRSFP 143
           EI++L+   KH+   N  + I N       +  N + I+ E + + L+  +         
Sbjct: 59  EIKILKHF-KHE---N-IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSD-- 111

Query: 144 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 203
            D ++    Q L  +  +H   +IH DLKP N+L+ S+  +KV D+  +    + ++   
Sbjct: 112 -DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170

Query: 204 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVEL 262
                 +          +        V+TR YRAPEV+L    ++   D+WS GCIL EL
Sbjct: 171 EPTGQQSGM------VEF--------VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216

Query: 263 CTGEALFQTHENLEHLAMMERVLG-PLPQHMLKRVD-RHAEKYVR----RGRLDWPEGAA 316
                +F   +    L ++  ++G P   + L+ ++   A +Y++           +   
Sbjct: 217 FLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEK--- 273

Query: 317 SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                      P         V+    DL   LQ +L +DP  R+TA+EAL HP+    H
Sbjct: 274 ---------MFP--------RVNPKGIDL---LQRMLVFDPAKRITAKEALEHPYLQTYH 313

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  137 bits (346), Expect = 3e-37
 Identities = 47/242 (19%), Positives = 92/242 (38%), Gaps = 28/242 (11%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
            +H  +GEG F QV E    +  +    +    +K  + A   E  +  QL +  K   +
Sbjct: 68  YVHHLLGEGAFAQVYEATQGDLNDAKNKQKF-VLKVQKPANPWEFYIGTQLMERLKPSMQ 126

Query: 106 --CVQIRNWFDYRNHICIVFEKL-GSSLYDFL---RKNNYRSFPIDLVREIARQLLECIA 159
              ++  +   ++N   +V E     +L + +   +    +  P  LV   A ++L  I 
Sbjct: 127 HMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIE 186

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +HD  +IH D+KP+N +L +    +  +   S                  + +ID G +
Sbjct: 187 QVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAG----------------LALIDLGQS 230

Query: 220 TYER--PDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
              +  P      +   T  ++  E++    W Y  D + V   +  +  G  +   +E 
Sbjct: 231 IDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG 290

Query: 275 LE 276
            E
Sbjct: 291 GE 292

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  136 bits (345), Expect = 3e-37
 Identities = 66/338 (19%), Positives = 115/338 (34%), Gaps = 91/338 (26%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKG 102
               K+GEG+FG+ +     E      IK +       K RE +  E+ VL  + KH   
Sbjct: 27  VRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHP-- 83

Query: 103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
               VQ R  F+    + IV +   G  L+  +       F  D + +   Q+   +  +
Sbjct: 84  --NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           HD  ++H D+K +N+ L                            K   +++ DFG    
Sbjct: 142 HDRKILHRDIKSQNIFL---------------------------TKDGTVQLGDFGIARV 174

Query: 222 ERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
                      + T +Y +PE+     +    DIW++GC+L ELCT +  F+   ++++L
Sbjct: 175 LNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA-GSMKNL 233

Query: 279 AM--MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            +  +     P+  H                         S +                 
Sbjct: 234 VLKIISGSFPPVSLHY------------------------SYD----------------- 252

Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                   L  L+  L + +P DR +    L   F  +
Sbjct: 253 --------LRSLVSQLFKRNPRDRPSVNSILEKGFIAK 282

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  136 bits (345), Expect = 3e-37
 Identities = 83/346 (23%), Positives = 142/346 (41%), Gaps = 74/346 (21%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREA--AMIEIEVLQQLAKHDKG 102
              + +G G +G V    D+   E VAIK + R  +    A  A  E+ +L+ + +H+  
Sbjct: 27  VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHE-- 83

Query: 103 GNRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
            N  + + + F             +V   + + L   +       F  + ++ +  Q+L+
Sbjct: 84  -N-VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK----FSEEKIQYLVYQMLK 137

Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + ++H   ++H DLKP N+ +                                +K++DF
Sbjct: 138 GLKYIHSAGVVHRDLKPGNLAVNED---------------------------CELKILDF 170

Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENL 275
           G   +   +    V TR YRAPEVIL         DIWSVGCI+ E+ TG+ LF+  + L
Sbjct: 171 GLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL 230

Query: 276 EHLAMMERVLGPLPQHMLKRV-DRHAEKYVR----RGRLDWPEGAASRESIKSVMKLPRL 330
           + L  + +V G      ++++ D+ A+ Y++      R D+ +                 
Sbjct: 231 DQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQ----------------- 273

Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
              +       A D   LL+ +L  D   RLTA +AL HPFF    
Sbjct: 274 ---LFPRASPQAAD---LLEKMLELDVDKRLTAAQALTHPFFEPFR 313

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  137 bits (346), Expect = 3e-37
 Identities = 81/351 (23%), Positives = 149/351 (42%), Gaps = 83/351 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--------KKYREAAMIEIEVLQQLA 97
           +  S +G G +G V   +D +    VA+K +           + YRE     + +L+ + 
Sbjct: 32  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKHM- 85

Query: 98  KHDKGGNRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIA 151
           KH+   N  + + + F      +  N + +V   +G+ L + ++         D V+ + 
Sbjct: 86  KHE---N-VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLI 138

Query: 152 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
            Q+L  + ++H   +IH DLKP N+ +                                +
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLAVNED---------------------------CEL 171

Query: 212 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQ 270
           K++DFG   +   +    V+TR YRAPE++L    +    DIWSVGCI+ EL TG  LF 
Sbjct: 172 KILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231

Query: 271 THENLEHLAMMERVLGPLPQHMLKRV-DRHAEKYVR----RGRLDWPEGAASRESIKSVM 325
             ++++ L ++ R++G     +LK++    A  Y++      ++++              
Sbjct: 232 GTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFAN------------ 279

Query: 326 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                   +    +  A D   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 280 --------VFIGANPLAVD---LLEKMLVLDSDKRITAAQALAHAYFAQYH 319

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  134 bits (340), Expect = 4e-37
 Identities = 66/340 (19%), Positives = 124/340 (36%), Gaps = 85/340 (25%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-------REAAMIEIEVLQQLAK 98
           ++  ++G G F  V +C  +   +  A K ++  +         RE    E+ +L+++ +
Sbjct: 8   EMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-R 66

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
           H       + + + F+ +  + ++ E + G  L+DFL +        D   +  +Q+L+ 
Sbjct: 67  HP----NIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDG 120

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + ++H   + H DLKPEN++L+                        +   +  IK+IDFG
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLD-----------------------KNVPNPRIKLIDFG 157

Query: 218 STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
                     +  I  T  + APE++         D+WS+G I   L +G + F      
Sbjct: 158 IAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF------ 211

Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 335
                    LG   Q  L          +     D+ E                      
Sbjct: 212 ---------LGETKQETLTN--------ISAVNYDFDEEY-------------------F 235

Query: 336 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
            +    A D    ++ LL  DP  R+T  ++L H +    
Sbjct: 236 SNTSELAKD---FIRRLLVKDPKRRMTIAQSLEHSWIKAI 272

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  135 bits (342), Expect = 5e-37
 Identities = 72/340 (21%), Positives = 122/340 (35%), Gaps = 85/340 (25%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-------REAAMIEIEVLQQLAK 98
            I  ++G G F  V +C ++      A K ++  +         RE    E+ +L+Q+  
Sbjct: 15  DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-L 73

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
           H       + + + ++ R  + ++ E + G  L+DFL +        +      +Q+L+ 
Sbjct: 74  HH----NVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + ++H   + H DLKPEN++L+                               IK+IDFG
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKN-----------------------IPIPHIKLIDFG 164

Query: 218 STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
                     +  I  T  + APE++         D+WS+G I   L +G + F      
Sbjct: 165 LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF------ 218

Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 335
                    LG   Q  L          +     D+ E                      
Sbjct: 219 ---------LGDTKQETLAN--------ITSVSYDFDEEF-------------------F 242

Query: 336 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
            H    A D    ++ LL  +   RLT +EALRHP+ T  
Sbjct: 243 SHTSELAKD---FIRKLLVKETRKRLTIQEALRHPWITPV 279

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  136 bits (344), Expect = 5e-37
 Identities = 75/353 (21%), Positives = 130/353 (36%), Gaps = 75/353 (21%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI------------EIEVL 93
            +   +  G++G V    D E    VAIK V           I            EI +L
Sbjct: 25  TVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83

Query: 94  QQLAKHDKGGNRCVQIRNWF-----DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVR 148
                H    N  + +R+ F        + + +V E + + L   +            ++
Sbjct: 84  NHF-HHP---N-ILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVISPQHIQ 137

Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
                +L  +  +H+  ++H DL P N +L++                            
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGN-ILLADN-------------------------- 170

Query: 209 SAIKVIDFGSTTYERPDQN---YIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCT 264
           + I + DF     +  D N   Y V+ R YRAPE+++   G+T   D+WS GC++ E+  
Sbjct: 171 NDITICDFNLAREDTADANKTHY-VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229

Query: 265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVD-RHAEKYVRRGRLDWPEGAASRESIKS 323
            +ALF+       L  +  V+G      +       A  Y+R    + P       +  +
Sbjct: 230 RKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP-----ARAWTA 284

Query: 324 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
           V  +P          D  A D   L+  +L ++P  R++  +ALRHP+F    
Sbjct: 285 V--VP--------TADPVALD---LIAKMLEFNPQRRISTEQALRHPYFESLF 324

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  136 bits (345), Expect = 7e-37
 Identities = 58/341 (17%), Positives = 111/341 (32%), Gaps = 66/341 (19%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGG 103
            +   +G+G    V     ++  ++ AIK+       +  +  M E EVL++L  H    
Sbjct: 12  LLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHK--- 67

Query: 104 NRCVQIRNWFDYRN--HICIVFEKL-GSSLYDFLRKN-NYRSFPIDLVREIARQLLECIA 159
              V++    +     H  ++ E     SLY  L +  N    P      + R ++  + 
Sbjct: 68  -NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            + +  ++H ++KP N++ V  E                          S  K+ DFG+ 
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGE-----------------------DGQSVYKLTDFGAA 163

Query: 220 TYERPDQNY--IVSTRHYRAPEVILGLGWTYP--------CDIWSVGCILVELCTGEALF 269
                D+ +  +  T  Y  P++                  D+WS+G       TG   F
Sbjct: 164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223

Query: 270 QTHENLEHLA-MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 328
           +  E       +M +++   P   +  V +        G +DW        S+   ++  
Sbjct: 224 RPFEGPRRNKEVMYKIITGKPSGAISGVQK-----AENGPIDWSGDMPVSCSLSRGLQ-- 276

Query: 329 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 369
                           LT +L  +L  D        +    
Sbjct: 277 --------------VLLTPVLANILEADQEKCWGFDQFFAE 303

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  133 bits (337), Expect = 1e-36
 Identities = 76/334 (22%), Positives = 121/334 (36%), Gaps = 83/334 (24%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGG 103
               K+G G FG V    +R       IK +     +   E    EIEVL+ L  H    
Sbjct: 25  IFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-DHP--- 80

Query: 104 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFL--RKNNYRSFPIDLVREIARQLLECIAF 160
              ++I   F+  +++ IV E   G  L + +   +   ++     V E+ +Q++  +A+
Sbjct: 81  -NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY 139

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
            H   ++H DLKPEN+L   +                           S IK+IDFG   
Sbjct: 140 FHSQHVVHKDLKPENILFQDTS------------------------PHSPIKIIDFGLAE 175

Query: 221 YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
             + D++      T  Y APEV      T+ CDIWS G ++  L TG   F    +LE +
Sbjct: 176 LFKSDEHSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFT-GTSLEEV 233

Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
                                  +       ++                        + +
Sbjct: 234 Q----------------------QKATYKEPNYAVEC--------------------RPL 251

Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
              A D   LL+ +L  DP  R +A + L H +F
Sbjct: 252 TPQAVD---LLKQMLTKDPERRPSAAQVLHHEWF 282

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  135 bits (341), Expect = 1e-36
 Identities = 40/355 (11%), Positives = 88/355 (24%), Gaps = 99/355 (27%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVRG--------IKKYREAAMIEIEVLQQLAKHDKGG 103
             G    V    D ER E  A+K+           +++  EA      +L +  +  +  
Sbjct: 71  RVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDR 130

Query: 104 NRCVQIRNWFDYRNH-----------------ICIVFEKLGSSLYDFLRKNNYRS----- 141
            R +   +    ++                    ++       L       ++       
Sbjct: 131 RRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGD 190

Query: 142 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 201
             I  +  +  QL+   A +    ++H    P+N+ ++                      
Sbjct: 191 EGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIM---------------------- 228

Query: 202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTY--PCDIWSVGCIL 259
                    + + D  +                Y   E +     T+    + W +G  +
Sbjct: 229 -----PDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSI 283

Query: 260 VELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRE 319
             +      F                G +   +     R + +      L +       +
Sbjct: 284 YRVWCLFLPF----------------GLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPD 327

Query: 320 SIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            +K+                        L+   L +D   RL   EA+  P F +
Sbjct: 328 FVKT------------------------LIGRFLNFDRRRRLLPLEAMETPEFLQ 358

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  135 bits (341), Expect = 2e-36
 Identities = 71/341 (20%), Positives = 121/341 (35%), Gaps = 85/341 (24%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-------KYREAAMIEIEVLQQLAK 98
            I  ++G G F  V +C ++      A K ++  +         RE    E+ +L+Q+  
Sbjct: 15  DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-L 73

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
           H       + + + ++ R  + ++ E + G  L+DFL +        +      +Q+L+ 
Sbjct: 74  HP----NIITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + ++H   + H DLKPEN++L+                               IK+IDFG
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKN-----------------------IPIPHIKLIDFG 164

Query: 218 STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
                     +  I  T  + APE++         D+WS+G I   L +G + F      
Sbjct: 165 LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF------ 218

Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 335
                    LG   Q  L          +     D+ E                      
Sbjct: 219 ---------LGDTKQETLAN--------ITAVSYDFDEEF-------------------F 242

Query: 336 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                 A D    ++ LL  +   RLT +EALRHP+ T   
Sbjct: 243 SQTSELAKD---FIRKLLVKETRKRLTIQEALRHPWITPVD 280

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  134 bits (340), Expect = 2e-36
 Identities = 83/350 (23%), Positives = 142/350 (40%), Gaps = 77/350 (22%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHDKGG 103
              S +GEG +G V   +D   K  VAIK +   +          EI++L +  +H+   
Sbjct: 30  TNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHE--- 85

Query: 104 NRCVQIRNWF-----DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           N  + I +       +    + IV + + + LY  L+  +      D +     Q+L  +
Sbjct: 86  N-IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 141

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 217
            ++H   ++H DLKP N LL+++                             +K+ DFG 
Sbjct: 142 KYIHSANVLHRDLKPSN-LLLNTT--------------------------CDLKICDFGL 174

Query: 218 --STTYERPDQNYI---VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQT 271
                 +     ++   V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F  
Sbjct: 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234

Query: 272 HENLEHLAMMERVLGPLPQHMLKRV-DRHAEKYVR----RGRLDWPEGAASRESIKSVMK 326
              L+ L  +  +LG   Q  L  + +  A  Y+     + ++ W               
Sbjct: 235 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR------------L 282

Query: 327 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
            P        + D  A D   LL  +L ++P  R+   +AL HP+  + +
Sbjct: 283 FP--------NADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQYY 321

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  133 bits (336), Expect = 2e-36
 Identities = 72/339 (21%), Positives = 130/339 (38%), Gaps = 91/339 (26%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKGGN 104
                +G G F +V     R   ++ A+K ++    +R++++  EI VL+++ KH+   N
Sbjct: 12  IFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI-KHE---N 67

Query: 105 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             V + + ++   H  +V + + G  L+D + +     +       + +Q+L  + ++H+
Sbjct: 68  -IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV--YTEKDASLVIQQVLSAVKYLHE 124

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             ++H DLKPEN+L ++ E                        ++S I + DFG +  E+
Sbjct: 125 NGIVHRDLKPENLLYLTPE------------------------ENSKIMITDFGLSKMEQ 160

Query: 224 PDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELCTGEALFQTHENLEHLAMM 281
                    T  Y APEV+    ++   D WS+G I  + LC G   F   E    L   
Sbjct: 161 NGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLC-GYPPFYE-ETESKL--F 216

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESIKSVMKLPRLQNLIMQ 336
           E++                      G  +     W                         
Sbjct: 217 EKIK--------------------EGYYEFESPFWD------------------------ 232

Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
            +  SA D    +  LL  DP +R T  +AL HP+   +
Sbjct: 233 DISESAKD---FICHLLEKDPNERYTCEKALSHPWIDGN 268

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  135 bits (342), Expect = 3e-36
 Identities = 82/349 (23%), Positives = 134/349 (38%), Gaps = 91/349 (26%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAAMI--EIEVLQQL 96
            +   +G G  G+V   ++R+  + VAI+I+          ++   A  +  EIE+L++L
Sbjct: 138 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL 197

Query: 97  AKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLL 155
             H       ++I+N+FD      IV E + G  L+D +  N          +    Q+L
Sbjct: 198 -NHP----CIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQML 249

Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H+  +IH DLKPENVLL S E                        +   IK+ D
Sbjct: 250 LAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITD 285

Query: 216 FGSTTYERPDQNY--IVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQ 270
           FG +           +  T  Y APEV++ +   G+    D WS+G IL    +G   F 
Sbjct: 286 FGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 345

Query: 271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL 330
            H                   +  +        +  G+ ++                   
Sbjct: 346 EHRT--------------QVSLKDQ--------ITSGKYNFIP----------------- 366

Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
              +   V   A D   L++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 367 --EVWAEVSEKALD---LVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 410

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  132 bits (335), Expect = 3e-36
 Identities = 84/341 (24%), Positives = 135/341 (39%), Gaps = 93/341 (27%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHDKG 102
            I   +G+G+FG+VL+C DR  ++  A+K++       K     + E+E+L++L  H   
Sbjct: 25  NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHP-- 81

Query: 103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
            N  +++    +  +   IV E   G  L+D + K     F       I +Q+   I +M
Sbjct: 82  -N-IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYM 137

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   ++H DLKPEN+LL S E                        K   IK+IDFG +T 
Sbjct: 138 HKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGLSTC 173

Query: 222 ERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
            + +      + T +Y APEV+ G  +   CD+WS G IL  L +G   F   +N   + 
Sbjct: 174 FQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPF-YGKNEYDIL 231

Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESIKSVMKLPRLQNLI 334
                                 K V  G+       W                       
Sbjct: 232 ----------------------KRVETGKYAFDLPQWR---------------------- 247

Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
              +   A D   L++ +L + P+ R+TA + L HP+  + 
Sbjct: 248 --TISDDAKD---LIRKMLTFHPSLRITATQCLEHPWIQKY 283

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  133 bits (337), Expect = 3e-36
 Identities = 63/340 (18%), Positives = 120/340 (35%), Gaps = 85/340 (25%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-------REAAMIEIEVLQQLAK 98
               ++G G F  V +C ++      A K ++  +         RE    E+ +L+++ +
Sbjct: 14  DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-Q 72

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
           H       + +   ++ +  + ++ E + G  L+DFL +        +   E  +Q+L  
Sbjct: 73  HP----NVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + ++H L + H DLKPEN++L+                               IK+IDFG
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRN-----------------------VPKPRIKIIDFG 163

Query: 218 STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
                     +  I  T  + APE++         D+WS+G I   L +G + F      
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223

Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 335
           E    +  V                         ++ +                      
Sbjct: 224 E---TLANVS--------------------AVNYEFEDEY-------------------F 241

Query: 336 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
            +    A D    ++ LL  DP  R+T +++L+HP+    
Sbjct: 242 SNTSALAKD---FIRRLLVKDPKKRMTIQDSLQHPWIKPK 278

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  131 bits (333), Expect = 4e-36
 Identities = 70/342 (20%), Positives = 118/342 (34%), Gaps = 97/342 (28%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDK 101
            + + +G G++G+V     +  +   A K    I KY     +    EIE+++ L  H  
Sbjct: 12  TLENTIGRGSWGEVKIAVQKGTRIRRAAKK---IPKYFVEDVDRFKQEIEIMKSL-DH-- 65

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                +++   F+    I +V E   G  L++ +       F       I + +L  +A+
Sbjct: 66  --PNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKDVLSAVAY 121

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
            H L + H DLKPEN L ++                            S +K+IDFG   
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDS------------------------PDSPLKLIDFGLAA 157

Query: 221 YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
             +P +     V T +Y +P+V+ G  +   CD WS G ++  L  G   F        +
Sbjct: 158 RFKPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSA-PTDSEV 215

Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESIKSVMKLPRLQNL 333
                                    +R G        W                      
Sbjct: 216 M----------------------LKIREGTFTFPEKDWL--------------------- 232

Query: 334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
              +V   A     L++ LL   P  R+T+ +AL H +F + 
Sbjct: 233 ---NVSPQAES---LIRRLLTKSPKQRITSLQALEHEWFEKQ 268

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  133 bits (336), Expect = 6e-36
 Identities = 76/339 (22%), Positives = 130/339 (38%), Gaps = 95/339 (28%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHDKGG 103
           ++ S++G G    V  C  +  ++  A+K+   +KK  +  ++  EI VL +L  H    
Sbjct: 56  EVESELGRGATSIVYRCKQKGTQKPYALKV---LKKTVDKKIVRTEIGVLLRL-SHP--- 108

Query: 104 NRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
           N  ++++  F+    I +V E   G  L+D + +  Y  +      +  +Q+LE +A++H
Sbjct: 109 N-IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY--YSERDAADAVKQILEAVAYLH 165

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
           +  ++H DLKPEN+L  +                            + +K+ DFG +   
Sbjct: 166 ENGIVHRDLKPENLLYATPA------------------------PDAPLKIADFGLSKIV 201

Query: 223 RPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELCTGEALFQTHENLEHLA 279
                   +  T  Y APE++ G  +    D+WSVG I  + LC G   F      +   
Sbjct: 202 EHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLC-GFEPFYDERGDQ--F 258

Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESIKSVMKLPRLQNLI 334
           M  R+L                              W                       
Sbjct: 259 MFRRIL--------------------NCEYYFISPWWD---------------------- 276

Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
              V  +A D   L++ L+  DP  RLT  +AL+HP+ T
Sbjct: 277 --EVSLNAKD---LVRKLIVLDPKKRLTTFQALQHPWVT 310

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  133 bits (336), Expect = 8e-36
 Identities = 66/350 (18%), Positives = 119/350 (34%), Gaps = 110/350 (31%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHDKG 102
            +  ++G+G F  V  C  +      A KI+   +   +  +    E  + ++L +H   
Sbjct: 32  DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHP-- 88

Query: 103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
            N  V++ +     +   +VF+ + G  L++ +    +  +         +Q+LE IA+ 
Sbjct: 89  -N-IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESIAYC 144

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   ++H +LKPEN+LL S                          K +A+K+ DFG    
Sbjct: 145 HSNGIVHRNLKPENLLLASKA------------------------KGAAVKLADFGLAIE 180

Query: 222 ERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC--------TGEALFQ 270
               + +     T  Y +PEV+    ++ P DIW+ G IL + L             L+ 
Sbjct: 181 VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA 240

Query: 271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESIKSVM 325
                                            ++ G  D     W              
Sbjct: 241 Q--------------------------------IKAGAYDYPSPEWD------------- 255

Query: 326 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                       V   A     L+  +L  +P  R+TA +AL+ P+    
Sbjct: 256 -----------TVTPEAKS---LIDSMLTVNPKKRITADQALKVPWICNR 291

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score =  134 bits (340), Expect = 9e-36
 Identities = 86/383 (22%), Positives = 148/383 (38%), Gaps = 86/383 (22%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--------KKYREAAMIEIEVLQQLA 97
           +I   +G G++G V E +D+  K +VAIK +  +        +  RE     I +L +L 
Sbjct: 56  EIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILRE-----IAILNRL- 109

Query: 98  KHDKGGN----RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQ 153
            HD   +      + I    +  + + +V E   S      R   Y +     ++ +   
Sbjct: 110 NHD---HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLT--ELHIKTLLYN 164

Query: 154 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 213
           LL  + ++H   ++H DLKP N L+     +KV D+  +       +   ++P S     
Sbjct: 165 LLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224

Query: 214 IDFGSTTYERPDQNYI---VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCT----- 264
           ++  +  + +  +  +   V TR YRAPE+IL    +T   D+WS+GCI  EL       
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKEN 284

Query: 265 ------GEALF--------------------QTHENLEHLAMMERVLGPLPQHMLKRV-D 297
                    LF                     T  N + L ++  +LG   +  ++ +  
Sbjct: 285 VAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEK 344

Query: 298 RHAEKYVR----RGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL 353
             A++Y+R    R   D  E            + P             A  L   L+ +L
Sbjct: 345 EDAKRYIRIFPKREGTDLAE------------RFP--------ASSADAIHL---LKRML 381

Query: 354 RYDPTDRLTAREALRHPFFTRDH 376
            ++P  R+T  E L HPFF    
Sbjct: 382 VFNPNKRITINECLAHPFFKEVR 404

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  132 bits (335), Expect = 1e-35
 Identities = 86/346 (24%), Positives = 145/346 (41%), Gaps = 73/346 (21%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREA--AMIEIEVLQQLAKHDKG 102
           +    +G G +G V    D      VAIK + R  +    A  A  E+ +L+ + +H+  
Sbjct: 28  RDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHE-- 84

Query: 103 GNRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
            N  + + + F      D      +V   +G+ L   ++         D ++ +  Q+L+
Sbjct: 85  -N-VIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGE---DRIQFLVYQMLK 139

Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + ++H   +IH DLKP N+ +                                +K++DF
Sbjct: 140 GLRYIHAAGIIHRDLKPGNLAVNED---------------------------CELKILDF 172

Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL 275
           G       +    V TR YRAPEVIL    +T   DIWSVGCI+ E+ TG+ LF+  ++L
Sbjct: 173 GLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL 232

Query: 276 EHLAMMERVLGPLPQHMLKRV-DRHAEKYVR----RGRLDWPEGAASRESIKSVMKLPRL 330
           + L  + +V G  P   ++R+    A+ Y++      + D+                   
Sbjct: 233 DQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFAS----------------- 275

Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
              I+ +    A +   LL+ +L  D   R+TA EAL HP+F   H
Sbjct: 276 ---ILTNASPLAVN---LLEKMLVLDAEQRVTAGEALAHPYFESLH 315

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  129 bits (327), Expect = 3e-35
 Identities = 75/341 (21%), Positives = 125/341 (36%), Gaps = 105/341 (30%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRCV 107
           G+G F +  E  D + KE+ A KIV    + K  +   +  EI + + L  H       V
Sbjct: 24  GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AH----QHVV 78

Query: 108 QIRNWFDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
               +F+  + + +V E     SL +  ++   ++      R   RQ++    ++H   +
Sbjct: 79  GFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRV 136

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           IH DLK  N+ L         +    +                  K+ DFG +T  E   
Sbjct: 137 IHRDLKLGNLFL---------NEDLEV------------------KIGDFGLATKVEYDG 169

Query: 226 Q---------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
           +         NYI       APEV+   G ++  D+WS+GCI+  L  G+  F+T   L 
Sbjct: 170 ERKKVLCGTPNYI-------APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET-SCL- 220

Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
                        +    R        +++     P+                       
Sbjct: 221 -------------KETYLR--------IKKNEYSIPK----------------------- 236

Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
           H++  A     L+Q +L+ DPT R T  E L   FFT  ++
Sbjct: 237 HINPVAAS---LIQKMLQTDPTARPTINELLNDEFFTSGYI 274

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  133 bits (336), Expect = 4e-35
 Identities = 70/351 (19%), Positives = 123/351 (35%), Gaps = 111/351 (31%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHDKG 102
           ++  ++G+G F  V  C      +  A  I+   +   +  +    E  + + L KH   
Sbjct: 14  QLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-KHP-- 70

Query: 103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
            N  V++ +      H  ++F+ + G  L++ +    Y  +         +Q+LE +   
Sbjct: 71  -N-IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQQILEAVLHC 126

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 220
           H + ++H +LKPEN+LL S                          K +A+K+ DFG +  
Sbjct: 127 HQMGVVHRNLKPENLLLASKL------------------------KGAAVKLADFGLAIE 162

Query: 221 YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC--------TGEALF 269
            E   Q +     T  Y +PEV+    +  P D+W+ G IL + L             L+
Sbjct: 163 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLY 222

Query: 270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESIKSV 324
           Q                                 ++ G  D     W             
Sbjct: 223 Q--------------------------------QIKAGAYDFPSPEWD------------ 238

Query: 325 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                        V   A D   L+  +L  +P+ R+TA EAL+HP+ +  
Sbjct: 239 ------------TVTPEAKD---LINKMLTINPSKRITAAEALKHPWISHR 274

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  129 bits (326), Expect = 5e-35
 Identities = 66/350 (18%), Positives = 119/350 (34%), Gaps = 110/350 (31%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHDKG 102
            +  ++G+G F  V  C  +      A KI+   +   +  +    E  + ++L +H   
Sbjct: 9   DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHP-- 65

Query: 103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
            N  V++ +     +   +VF+ + G  L++ +    +  +         +Q+LE IA+ 
Sbjct: 66  -N-IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESIAYC 121

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   ++H +LKPEN+LL S                          K +A+K+ DFG    
Sbjct: 122 HSNGIVHRNLKPENLLLASKA------------------------KGAAVKLADFGLAIE 157

Query: 222 ERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC--------TGEALFQ 270
               + +     T  Y +PEV+    ++ P DIW+ G IL + L             L+ 
Sbjct: 158 VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA 217

Query: 271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESIKSVM 325
                                            ++ G  D     W              
Sbjct: 218 Q--------------------------------IKAGAYDYPSPEWD------------- 232

Query: 326 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                       V   A     L+  +L  +P  R+TA +AL+ P+    
Sbjct: 233 -----------TVTPEAKS---LIDSMLTVNPKKRITADQALKVPWICNR 268

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  130 bits (329), Expect = 5e-35
 Identities = 75/341 (21%), Positives = 125/341 (36%), Gaps = 105/341 (30%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRCV 107
           G+G F +  E  D + KE+ A KIV    + K  +   +  EI + + L  H       V
Sbjct: 50  GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AH----QHVV 104

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
               +F+  + + +V E     SL +  ++   ++      R   RQ++    ++H   +
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRV 162

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           IH DLK  N+ L         +                      +K+ DFG +T  E   
Sbjct: 163 IHRDLKLGNLFL---------NEDLE------------------VKIGDFGLATKVEYDG 195

Query: 226 Q---------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
           +         NYI       APEV+   G ++  D+WS+GCI+  L  G+  F+T   L 
Sbjct: 196 ERKKVLCGTPNYI-------APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET-SCL- 246

Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
                        +    R        +++     P+                       
Sbjct: 247 -------------KETYLR--------IKKNEYSIPK----------------------- 262

Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
           H++  A     L+Q +L+ DPT R T  E L   FFT  ++
Sbjct: 263 HINPVA---ASLIQKMLQTDPTARPTINELLNDEFFTSGYI 300

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  130 bits (330), Expect = 8e-35
 Identities = 80/326 (24%), Positives = 128/326 (39%), Gaps = 80/326 (24%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           G G FGQV +C +      +A KI++    K +E    EI V+ QL  H       +Q+ 
Sbjct: 98  GGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-DHA----NLIQLY 152

Query: 111 NWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHT 169
           + F+ +N I +V E + G  L+D +   +Y +          +Q+ E I  MH + ++H 
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESY-NLTELDTILFMKQICEGIRHMHQMYILHL 211

Query: 170 DLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY- 228
           DLKPEN+L V+                           +  IK+IDFG     +P +   
Sbjct: 212 DLKPENILCVN-------------------------RDAKQIKIIDFGLARRYKPREKLK 246

Query: 229 -IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGP 287
               T  + APEV+     ++P D+WSVG I   L +G + F               LG 
Sbjct: 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF---------------LGD 291

Query: 288 LPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH 347
                L          +   R D  +                      Q +   A +   
Sbjct: 292 NDAETLNN--------ILACRWDLEDEE-------------------FQDISEEAKE--- 321

Query: 348 LLQGLLRYDPTDRLTAREALRHPFFT 373
            +  LL  + + R++A EAL+HP+ +
Sbjct: 322 FISKLLIKEKSWRISASEALKHPWLS 347

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  128 bits (323), Expect = 2e-34
 Identities = 78/354 (22%), Positives = 125/354 (35%), Gaps = 107/354 (30%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV----------RGIKKYREAAMIEIEVLQQ 95
           +    +G G    V  C  +   +  A+KI+            +++ REA + E+++L++
Sbjct: 20  EPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRK 79

Query: 96  LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 154
           ++ H    N  +Q+++ ++      +VF+ +    L+D+L +           R+I R L
Sbjct: 80  VSGHP---N-IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRAL 133

Query: 155 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
           LE I  +H L ++H DLKPEN+LL                                IK+ 
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDD---------------------------DMNIKLT 166

Query: 215 DFGSTTYERPDQNY--IVSTRHYRAPEVILGL------GWTYPCDIWSVGCILVELCTGE 266
           DFG +    P +    +  T  Y APE+I         G+    D+WS G I+  L  G 
Sbjct: 167 DFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 226

Query: 267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESI 321
             F  H                   ML+         +  G        W          
Sbjct: 227 PPF-WHRK--------------QMLMLRM--------IMSGNYQFGSPEWD--------- 254

Query: 322 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                              +  D   L+   L   P  R TA EAL HPFF + 
Sbjct: 255 ---------------DYSDTVKD---LVSRFLVVQPQKRYTAEEALAHPFFQQY 290

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  127 bits (322), Expect = 5e-34
 Identities = 65/337 (19%), Positives = 103/337 (30%), Gaps = 92/337 (27%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           ++G G+FG+V    D++     A+K VR         + E+     L        R V +
Sbjct: 65  RVGRGSFGEVHRMKDKQTGFQCAVKKVR----LEVFRVEELVACAGL-SSP----RIVPL 115

Query: 110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                    + I  E L G SL   +++      P D       Q LE + ++H   ++H
Sbjct: 116 YGAVREGPWVNIFMELLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRRILH 173

Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--------STT 220
            D+K +NVLL                              S   + DFG           
Sbjct: 174 GDVKADNVLL--------------------------SSDGSRAALCDFGHALCLQPDGLG 207

Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                 +YI  T  + APEV++G       DIWS  C+++ +  G           H   
Sbjct: 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG----------CH--- 254

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
                 P  Q+                                 +K+      I +    
Sbjct: 255 ------PWTQY---------------------------FRGPLCLKIASEPPPIREIPPS 281

Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
            A      +Q  LR +P  R +A E  R        +
Sbjct: 282 CAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  127 bits (320), Expect = 6e-34
 Identities = 66/340 (19%), Positives = 110/340 (32%), Gaps = 89/340 (26%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNR 105
           K+G G F +V           VA+K V+       K R   + EI++L+QL  H    N 
Sbjct: 39  KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHP---N- 93

Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAFMH 162
            ++    F   N + IV E      L   ++  K   R  P   V +   QL   +  MH
Sbjct: 94  VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTY 221
              ++H D+KP NV +                             +  +K+ D G    +
Sbjct: 154 SRRVMHRDIKPANVFIT---------------------------ATGVVKLGDLGLGRFF 186

Query: 222 ERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
                  + +V T +Y +PE I   G+ +  DIWS+GC+L E+   ++ F   + +   +
Sbjct: 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG-DKMNLYS 245

Query: 280 MMERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
           + +++     P                      P    S E          L+ L+    
Sbjct: 246 LCKKIEQCDYPP--------------------LPSDHYSEE----------LRQLVNM-- 273

Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
                         +  DP  R                  
Sbjct: 274 -------------CINPDPEKRPDVTYVYDVAKRMHACTA 300

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  127 bits (320), Expect = 8e-34
 Identities = 85/355 (23%), Positives = 136/355 (38%), Gaps = 103/355 (29%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAAMI--EIEVLQQL 96
            +   +G G  G+V   ++R+  + VAIKI+          ++   A  +  EIE+L++L
Sbjct: 13  IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72

Query: 97  AKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLL 155
             H       ++I+N+FD  ++  IV E + G  L+D +  N          +    Q+L
Sbjct: 73  -NHP----CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKR--LKEATCKLYFYQML 124

Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
             + ++H+  +IH DLKPENVLL S E                        +   IK+ D
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITD 160

Query: 216 FGSTTYERPDQNY--IVSTRHYRAPEVILGL---GWTYPCDIWSVGCIL-VELCTGEALF 269
           FG +           +  T  Y APEV++ +   G+    D WS+G IL + L  G   F
Sbjct: 161 FGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS-GYPPF 219

Query: 270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESIKSV 324
             H                   +  +        +  G+ +     W             
Sbjct: 220 SEHRT--------------QVSLKDQ--------ITSGKYNFIPEVWA------------ 245

Query: 325 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
                        V   A D   L++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 246 ------------EVSEKALD---LVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  131 bits (331), Expect = 8e-34
 Identities = 69/339 (20%), Positives = 111/339 (32%), Gaps = 64/339 (18%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGG 103
           ++  ++G G FG VL    ++  E VAIK  R     K RE   +EI+++++L  H    
Sbjct: 17  EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHP--- 72

Query: 104 N-----RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKN-NYRSFPIDLVREIARQLLE 156
           N                 +   +  E   G  L  +L +  N        +R +   +  
Sbjct: 73  NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132

Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + ++H+  +IH DLKPEN++L                            +    K+ID 
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGP------------------------QRLIHKIIDL 168

Query: 217 GSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           G        +     V T  Y APE++    +T   D WS G +  E  TG         
Sbjct: 169 GYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGF-------- 220

Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
                         P     +  +   K   +             ++K    LP   +L 
Sbjct: 221 -------------RPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLS 267

Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                  AG L   LQ +L +    R T  +      F 
Sbjct: 268 GI----LAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQ 302

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  127 bits (321), Expect = 1e-33
 Identities = 79/353 (22%), Positives = 127/353 (35%), Gaps = 108/353 (30%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQL 96
                +G G    V  C  R      A+KI+           +++ REA   E  +L+Q+
Sbjct: 97  DPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQV 156

Query: 97  AKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLL 155
           A H       + + + ++  + + +VF+ +    L+D+L +           R I R LL
Sbjct: 157 AGH----PHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA--LSEKETRSIMRSLL 210

Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
           E ++F+H   ++H DLKPEN+LL                             +  I++ D
Sbjct: 211 EAVSFLHANNIVHRDLKPENILLDD---------------------------NMQIRLSD 243

Query: 216 FGSTTYERPDQNY--IVSTRHYRAPEVILGL------GWTYPCDIWSVGCIL-VELCTGE 266
           FG + +  P +    +  T  Y APE++         G+    D+W+ G IL   L  G 
Sbjct: 244 FGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA-GS 302

Query: 267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESI 321
             F  H                   ML+         +  G+       W          
Sbjct: 303 PPF-WHRR--------------QILMLRM--------IMEGQYQFSSPEWD--------- 330

Query: 322 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                              +  D   L+  LL+ DP  RLTA +AL+HPFF R
Sbjct: 331 ---------------DRSSTVKD---LISRLLQVDPEARLTAEQALQHPFFER 365

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  125 bits (316), Expect = 1e-33
 Identities = 69/340 (20%), Positives = 122/340 (35%), Gaps = 104/340 (30%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRCV 107
           G+G+F  V           VAIK++  + + K      +  E+++  QL KH       +
Sbjct: 20  GKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KH----PSIL 74

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++ N+F+  N++ +V E      +  +L+    + F  +  R    Q++  + ++H   +
Sbjct: 75  ELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSHGI 133

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 225
           +H DL   N+LL             +                  IK+ DFG +T  + P 
Sbjct: 134 LHRDLTLSNLLL---------TRNMN------------------IKIADFGLATQLKMPH 166

Query: 226 Q---------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
           +         NYI       +PE+          D+WS+GC+   L  G   F T + + 
Sbjct: 167 EKHYTLCGTPNYI-------SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT-DTV- 217

Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
                        ++ L +        V     + P                        
Sbjct: 218 -------------KNTLNK--------VVLADYEMPS----------------------- 233

Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
            +   A D   L+  LLR +P DRL+    L HPF +R+ 
Sbjct: 234 FLSIEAKD---LIHQLLRRNPADRLSLSSVLDHPFMSRNS 270

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  125 bits (316), Expect = 2e-33
 Identities = 65/344 (18%), Positives = 108/344 (31%), Gaps = 83/344 (24%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
            +G G FG V E  ++      AIK +R    +  RE  M E++ L +L +H        
Sbjct: 12  CLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHP---GIVR 67

Query: 108 QIRNWFD-----------YRNHICIVFEKL--GSSLYDFLRKNNYRSFP-IDLVREIARQ 153
               W +            + ++ I  + L    +L D++            +   I  Q
Sbjct: 68  YFNAWLEKNTTEKLQPSSPKVYLYIQMQ-LCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126

Query: 154 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 213
           + E + F+H   ++H DLKP N+     + +KV D+               M +    + 
Sbjct: 127 IAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLV----------TAMDQDEEEQ- 175

Query: 214 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 273
               +           V T+ Y +PE I G  +++  DI+S+G IL EL      F T  
Sbjct: 176 -TVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYP---FSTQM 231

Query: 274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 333
                                         VR                    K P L   
Sbjct: 232 ERVRTLTD----------------------VRNL------------------KFPPLFTQ 251

Query: 334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
                         ++Q +L   P +R  A   + +  F     
Sbjct: 252 KYP-------CEYVMVQDMLSPSPMERPEAINIIENAVFEDLDF 288

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  123 bits (312), Expect = 4e-33
 Identities = 63/352 (17%), Positives = 112/352 (31%), Gaps = 101/352 (28%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKG 102
           ++   +G G++G+  +   +   +++  K +         ++  + E+ +L++L KH   
Sbjct: 9   EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHP-- 65

Query: 103 GNRCVQIRNWFDYR--NHICIVFEKL-GSSLYDFLR--KNNYRSFPIDLVREIARQLLEC 157
            N  V+  +    R    + IV E   G  L   +       +    + V  +  QL   
Sbjct: 66  -N-IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123

Query: 158 IAFMHDLC-----MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           +   H        ++H DLKP NV L                                +K
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLD---------------------------GKQNVK 156

Query: 213 VIDFGSTTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
           + DFG       D ++    V T +Y +PE +  + +    DIWS+GC+L ELC     F
Sbjct: 157 LGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216

Query: 270 QTHENLEHLAM--MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 327
               + + LA    E     +P                           S E        
Sbjct: 217 TA-FSQKELAGKIREGKFRRIPYRY------------------------SDE-------- 243

Query: 328 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 379
                            L  ++  +L      R +  E L +P    +H   
Sbjct: 244 -----------------LNEIITRMLNLKDYHRPSVEEILENPLI-LEHHHH 277

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score =  126 bits (319), Expect = 6e-33
 Identities = 86/379 (22%), Positives = 143/379 (37%), Gaps = 86/379 (22%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMI--EIEVLQQLAKHDKG 102
            I   +G G++G V   +D+  ++ VAIK + R  +   +   I  EI +L +L K D  
Sbjct: 29  IIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSD-- 85

Query: 103 GNRCVQIRNWF-----DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
               +++ +          + + IV E   S L    +   + +   + ++ I   LL  
Sbjct: 86  -Y-IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLT--EEHIKTILYNLLLG 141

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPD------YKSSLHTPKDSSYFKRMPKSSAI 211
             F+H+  +IH DLKP N LL     +KV D        S   T   +   +        
Sbjct: 142 ENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN 201

Query: 212 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTG----- 265
           K +    T++        V TR YRAPE+IL    +T   DIWS GCI  EL        
Sbjct: 202 KNLKKQLTSH--------VVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253

Query: 266 ------EALFQ-----------------THENLEHLAMMERVLGPLPQHMLKRV-DRHAE 301
                   LF                     N + L ++  ++G   +  LK +      
Sbjct: 254 NDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVI 313

Query: 302 KYVR----RGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP 357
           KY++    R  ++  +            K P         +     +L   L+ +L+++P
Sbjct: 314 KYIKLFPHRKPINLKQ------------KYP--------SISDDGINL---LESMLKFNP 350

Query: 358 TDRLTAREALRHPFFTRDH 376
             R+T  +AL HP+     
Sbjct: 351 NKRITIDQALDHPYLKDVR 369

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  122 bits (308), Expect = 3e-32
 Identities = 67/336 (19%), Positives = 123/336 (36%), Gaps = 107/336 (31%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
            +G G  G+VL+ +++  +E  A+K+++   K R     E+E+  + ++        V+I
Sbjct: 25  VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCP----HIVRI 76

Query: 110 RNWFD----YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            + ++     R  + IV E L G  L+  ++    ++F      EI + + E I ++H +
Sbjct: 77  VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 136

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            + H D+KPEN+L  S                           ++ +K+ DFG       
Sbjct: 137 NIAHRDVKPENLLYTSKR------------------------PNAILKLTDFG------- 165

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
                       A E   G  +   CD+WS+G I+  L  G   F ++            
Sbjct: 166 -----------FAKET-TGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG---------- 203

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESIKSVMKLPRLQNLIMQHVD 339
              +   M  R        +R G+ +     W                          V 
Sbjct: 204 -LAISPGMKTR--------IRMGQYEFPNPEWS------------------------EVS 230

Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                   L++ LL+ +PT R+T  E + HP+  + 
Sbjct: 231 EEVKM---LIRNLLKTEPTQRMTITEFMNHPWIMQS 263

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  121 bits (305), Expect = 5e-32
 Identities = 64/342 (18%), Positives = 124/342 (36%), Gaps = 93/342 (27%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKG 102
           K   ++G G+F  V +  D E    VA   ++     K  R+    E E+L+ L +H   
Sbjct: 29  KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHP-- 85

Query: 103 GNRCVQ-IRNWFDY---RNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLEC 157
               V+   +W      +  I +V E + S +L  +L++  ++   I ++R   RQ+L+ 
Sbjct: 86  --NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKG 141

Query: 158 IAFMH--DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
           + F+H     +IH DLK +N+ +                             + ++K+ D
Sbjct: 142 LQFLHTRTPPIIHRDLKCDNIFI--------------------------TGPTGSVKIGD 175

Query: 216 FG-STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
            G +T         ++ T  + APE+     +    D+++ G  ++E+ T E  +   +N
Sbjct: 176 LGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN 234

Query: 275 LEHLAMMERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 333
                +  RV  G  P    K                                 P ++ +
Sbjct: 235 AA--QIYRRVTSGVKPASFDKVAI------------------------------PEVKEI 262

Query: 334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
           I                  +R +  +R + ++ L H FF  +
Sbjct: 263 IEG---------------CIRQNKDERYSIKDLLNHAFFQEE 289

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  120 bits (304), Expect = 6e-32
 Identities = 69/329 (20%), Positives = 124/329 (37%), Gaps = 87/329 (26%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRCV 107
           G+G FG V    +++ K ++A+K++    ++K      +  E+E+   L +H       +
Sbjct: 18  GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPN----IL 72

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++  +F     + ++ E     ++Y  L+K     F          +L   +++ H   +
Sbjct: 73  RLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRV 130

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           IH D+KPEN+LL S+  +K+ D+  S+H P      +R                    D 
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRT-------------DLCGTLD- 172

Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 286
                   Y  PE+I G       D+WS+G +  E   G+  F+ +              
Sbjct: 173 --------YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------------- 211

Query: 287 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT 346
              Q   KR        + R    +P+                        V   A D  
Sbjct: 212 --YQETYKR--------ISRVEFTFPD-----------------------FVTEGARD-- 236

Query: 347 HLLQGLLRYDPTDRLTAREALRHPFFTRD 375
            L+  LL+++P+ R   RE L HP+ T +
Sbjct: 237 -LISRLLKHNPSQRPMLREVLEHPWITAN 264

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  120 bits (304), Expect = 8e-32
 Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 41/224 (18%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 110
           G+GT+G V    D   +  +AIK +     +Y +    EI + + L KH       VQ  
Sbjct: 31  GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL-KHK----NIVQYL 85

Query: 111 NWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPID--LVREIARQLLECIAFMHDLCMI 167
             F     I I  E++ G SL   L ++ +     +   +    +Q+LE + ++HD  ++
Sbjct: 86  GSFSENGFIKIFMEQVPGGSLSALL-RSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144

Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS---TTYERP 224
           H D+K +NVL+                             S  +K+ DFG+        P
Sbjct: 145 HRDIKGDNVLI--------------------------NTYSGVLKISDFGTSKRLAGINP 178

Query: 225 DQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGE 266
                  T  Y APE+I     G+    DIWS+GC ++E+ TG+
Sbjct: 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  120 bits (303), Expect = 1e-31
 Identities = 68/329 (20%), Positives = 118/329 (35%), Gaps = 87/329 (26%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRCV 107
           G+G FG V    +++ K ++A+K++    ++K      +  EIE+   L +H       +
Sbjct: 23  GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPN----IL 77

Query: 108 QIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++ N+F  R  I ++ E      LY  L+K+    F          +L + + + H+  +
Sbjct: 78  RMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHERKV 135

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           IH D+KPEN+L+     +K+ D+  S+H P      +R              T     D 
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSL----RRR-------------TMCGTLD- 177

Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 286
                   Y  PE+I G       D+W  G +  E   G   F +     H     R++ 
Sbjct: 178 --------YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP---SHTETHRRIV- 225

Query: 287 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT 346
                                 L +P                         +   + D  
Sbjct: 226 -------------------NVDLKFPP-----------------------FLSDGSKD-- 241

Query: 347 HLLQGLLRYDPTDRLTAREALRHPFFTRD 375
            L+  LLRY P  RL  +  + HP+   +
Sbjct: 242 -LISKLLRYHPPQRLPLKGVMEHPWVKAN 269

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  119 bits (299), Expect = 6e-31
 Identities = 55/341 (16%), Positives = 103/341 (30%), Gaps = 79/341 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLAKHDKGGN 104
               K+GEG F  V            A+K +   ++  RE A  E ++ +    H    N
Sbjct: 32  LFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF-NHP---N 87

Query: 105 RCVQIRNWF----DYRNHICIVFE-KLGSSLYDFL--RKNNYRSFPIDLVREIARQLLEC 157
             +++  +       ++   ++       +L++ +   K+       D +  +   +   
Sbjct: 88  -ILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG 146

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           +  +H     H DLKP N+LL       + D  S                + A   ++  
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSM---------------NQACIHVEGS 191

Query: 218 STTYERPDQNYIVSTRHYRAPEVI---LGLGWTYPCDIWSVGCILVELCTGEALFQ-THE 273
                  D      T  YRAPE+             D+WS+GC+L  +  GE  +    +
Sbjct: 192 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ 251

Query: 274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 333
             + +A+                         + +L  P+    R S         L  L
Sbjct: 252 KGDSVAL-----------------------AVQNQLSIPQS--PRHS-------SALWQL 279

Query: 334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           +                 ++  DP  R      L      +
Sbjct: 280 L---------------NSMMTVDPHQRPHIPLLLSQLEALQ 305

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  118 bits (298), Expect = 1e-30
 Identities = 68/346 (19%), Positives = 121/346 (34%), Gaps = 103/346 (29%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI-----EIEVLQQLAK 98
           ++   +G G FG V           VAIK V    I  + E         E+ +L+++  
Sbjct: 46  QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV-S 104

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKLGSS--LYDFLRKNNYRSFPIDLVREIARQLLE 156
               G   +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE
Sbjct: 105 SGFSG--VIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 160

Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            +   H+  ++H D+K EN+L+                   D +  +       +K+IDF
Sbjct: 161 AVRHCHNCGVLHRDIKDENILI-------------------DLNRGE-------LKLIDF 194

Query: 217 GSTTYERPDQNYIVS--TRHYRAPEVILGLGWTY---PCDIWSVGCILVELCTGEALFQT 271
           GS      D  Y     TR Y  PE I      Y      +WS+G +L ++  G+  F  
Sbjct: 195 GSGALL-KDTVYTDFDGTRVYSPPEWIRYHR--YHGRSAAVWSLGILLYDMVCGDIPF-- 249

Query: 272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 331
                                        ++ + RG++ +                    
Sbjct: 250 ---------------------------EHDEEIIRGQVFFR------------------- 263

Query: 332 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
                     + +  HL++  L   P+DR T  E   HP+     L
Sbjct: 264 -------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 302

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  117 bits (296), Expect = 1e-30
 Identities = 61/345 (17%), Positives = 112/345 (32%), Gaps = 101/345 (29%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI-----EIEVLQQLAK 98
           ++   +G+G FG V        +  VAIK++    +  +   +       E+ +L ++  
Sbjct: 34  RLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGA 93

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
                   +++ +WF+ +    +V E       L+D++ +           R    Q++ 
Sbjct: 94  GGGHPG-VIRLLDWFETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVA 150

Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            I   H   ++H D+K EN+L+                   D        +    K+IDF
Sbjct: 151 AIQHCHSRGVVHRDIKDENILI-------------------DL-------RRGCAKLIDF 184

Query: 217 GSTTYERPDQNYIVS--TRHYRAPEVILGLGWTY---PCDIWSVGCILVELCTGEALFQT 271
           GS      D+ Y     TR Y  PE I      Y   P  +WS+G +L ++  G+  F  
Sbjct: 185 GSGAL-LHDEPYTDFDGTRVYSPPEWISRHQ--YHALPATVWSLGILLYDMVCGDIPF-- 239

Query: 272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 331
                                        ++ +    L +P                   
Sbjct: 240 ---------------------------ERDQEILEAELHFPA------------------ 254

Query: 332 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                   H + D   L++  L   P+ R +  E L  P+     
Sbjct: 255 --------HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA 291

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  116 bits (293), Expect = 7e-30
 Identities = 59/360 (16%), Positives = 122/360 (33%), Gaps = 94/360 (26%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--------------- 88
           +I   + +G F +++ C   +  +  A+K      ++K R+                   
Sbjct: 34  RIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFK 91

Query: 89  -EIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNY------R 140
            E++++  + K++     C+         + + I++E +   S+  F             
Sbjct: 92  NELQIITDI-KNE---Y-CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146

Query: 141 SFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS 199
             PI +++ I + +L   +++H+   + H D+KP N+L+         D           
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM---------DKNGR------- 190

Query: 200 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVS--TRHYRAPEVILGLGWTY--PCDIWSV 255
                      +K+ DFG + Y   D+    S  T  +  PE             DIWS+
Sbjct: 191 -----------VKLSDFGESEY-MVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSL 238

Query: 256 GCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA 315
           G  L  +      F    +L                +           +R   +++P   
Sbjct: 239 GICLYVMFYNVVPFSLKISL--------------VELFNN--------IRTKNIEYPLDR 276

Query: 316 ASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                  +  K     N     + +   D    L+  LR +P +R+T+ +AL+H +    
Sbjct: 277 NHFLYPLTNKKSTCSNN----FLSNEDID---FLKLFLRKNPAERITSEDALKHEWLADT 329

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  116 bits (292), Expect = 7e-30
 Identities = 67/355 (18%), Positives = 109/355 (30%), Gaps = 110/355 (30%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGN 104
           ++   + EG F  V E  D       A+K +    ++   A + E+  +++L+ H    N
Sbjct: 31  RVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHP---N 87

Query: 105 ------RCVQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
                      +   D      ++  +L  G  +    +  +      D V +I  Q   
Sbjct: 88  IVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCR 147

Query: 157 CIAFMHDL--CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
            +  MH     +IH DLK EN+LL                                IK+ 
Sbjct: 148 AVQHMHRQKPPIIHRDLKVENLLLS---------------------------NQGTIKLC 180

Query: 215 DFGSTTYERPDQNYIVS-----------TRH----YRAPEVI---LGLGWTYPCDIWSVG 256
           DFGS T      +Y  S           TR+    YR PE+I            DIW++G
Sbjct: 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALG 240

Query: 257 CILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA 316
           CIL  LC  +  F+    L                            +  G+   P    
Sbjct: 241 CILYLLCFRQHPFEDGAKLR---------------------------IVNGKYSIP---- 269

Query: 317 SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                               H          L++ +L+ +P +RL+  E +    
Sbjct: 270 -------------------PHDTQYT-VFHSLIRAMLQVNPEERLSIAEVVHQLQ 304

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  117 bits (293), Expect = 9e-30
 Identities = 49/367 (13%), Positives = 108/367 (29%), Gaps = 127/367 (34%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAM------IEIEVLQQLAKHDKGGNR 105
           G+      LE  D+E  E   + +    ++    A+      +    L +  K+ K    
Sbjct: 82  GQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKV 141

Query: 106 CVQIRNWFD--------------------YRNHICIVFEKLGSSLYDFL-----RKNNYR 140
            ++    FD                    +      ++ ++ S+L  F        + ++
Sbjct: 142 HLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHK 201

Query: 141 SFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS 200
           S       ++  Q++  +A +H   ++HT L+P +++L                      
Sbjct: 202 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD--------------------- 240

Query: 201 YFKRMPKSSAIKVIDFGSTTYERPDQNYIVS--TRHYRAPEVILGLGW-----------T 247
                 +   + +  F        D   +VS  +R +  PE+                 T
Sbjct: 241 ------QRGGVFLTGFEHL---VRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMT 291

Query: 248 YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG 307
           +  D W++G ++  +   +    T +     +                      +++ R 
Sbjct: 292 FSFDAWALGLVIYWIWCADLPI-TKDAALGGS----------------------EWIFRS 328

Query: 308 RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 367
             + P+                                  LL+G LRY   DRL   +A+
Sbjct: 329 CKNIPQPVR------------------------------ALLEGFLRYPKEDRLLPLQAM 358

Query: 368 RHPFFTR 374
             P + +
Sbjct: 359 ETPEYEQ 365

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  110 bits (275), Expect = 4e-27
 Identities = 52/370 (14%), Positives = 105/370 (28%), Gaps = 122/370 (32%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--------GIKKYREAAMIE------------IE 91
           G+      LE  D+E  E   + +           IK+ +E  +                
Sbjct: 87  GQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKV 146

Query: 92  VLQQLAKHD--KGGNRCVQIRNWFDYRNH----ICIVFEKLGSSLYDFL-----RKNNYR 140
            L+ +   D  K   +   IR   D R+        ++ ++ S+L  F        + ++
Sbjct: 147 HLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHK 206

Query: 141 SFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS 200
           S       ++  Q++  +A +H   ++HT L+P +++L                      
Sbjct: 207 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD--------------------- 245

Query: 201 YFKRMPKSSAIKVIDFGSTTYE----RPDQNYIVSTRHYRAPEVILGLG-----WTYPCD 251
                 +   + +  F     +            +     A  ++          T+  D
Sbjct: 246 ------QRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFD 299

Query: 252 IWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW 311
            W++G  +  +   +    T +    L   E +                     R   + 
Sbjct: 300 TWTLGLAIYWIWCADLPN-TDDAA--LGGSEWIF--------------------RSCKNI 336

Query: 312 PEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
           P+   +                              LL+G LRY   DRL   +A+  P 
Sbjct: 337 PQPVRA------------------------------LLEGFLRYPKEDRLLPLQAMETPE 366

Query: 372 F--TRDHLRR 379
           +   R  L  
Sbjct: 367 YEQLRTELSA 376

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  107 bits (268), Expect = 1e-26
 Identities = 57/333 (17%), Positives = 109/333 (32%), Gaps = 75/333 (22%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +  +   E    +  E  D    +  +           +A  ++I  +   +  +  G  
Sbjct: 68  RYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQL 127

Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFP-IDLVREIARQLLECIAFMHD 163
                     + ++ I  +     +L D++ +          +   I  Q+ E + F+H 
Sbjct: 128 QP-----SSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS 182

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
             ++H DLKP N+     + +KV D+    +     ++ +    MP  +           
Sbjct: 183 KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA----------- 231

Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                    V T+ Y +PE I G  +++  DI+S+G IL EL      F T         
Sbjct: 232 ----THTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS---FSTQ-------- 276

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
           MERV       ++          VR  +   P             K P+   ++      
Sbjct: 277 MERV------RIITD--------VRNLKF--PLL--------FTQKYPQEHMMVQD---- 308

Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                      +L   PT+R  A + + +  F 
Sbjct: 309 -----------MLSPSPTERPEATDIIENAIFE 330

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  106 bits (267), Expect = 2e-26
 Identities = 71/345 (20%), Positives = 123/345 (35%), Gaps = 105/345 (30%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI----------EIEVLQQ 95
              S +G G FG V    D+E+ + V +K ++  +K  E   I          EI +L +
Sbjct: 27  STMSPLGSGAFGFVWTAVDKEKNKEVVVKFIK-KEKVLEDCWIEDPKLGKVTLEIAILSR 85

Query: 96  LAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSS--LYDFLRKNNYRSFPIDLVREIARQ 153
           + +H       +++ + F+ +    +V EK GS   L+ F+ ++        L   I RQ
Sbjct: 86  V-EHAN----IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQ 138

Query: 154 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 213
           L+  + ++    +IH D+K EN+++                      +         IK+
Sbjct: 139 LVSAVGYLRLKDIIHRDIKDENIVI-------------------AEDF--------TIKL 171

Query: 214 IDFGSTTYERPDQNYIVS--TRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQ 270
           IDFGS  Y    + +     T  Y APEV++G  +  P  ++WS+G  L  L   E    
Sbjct: 172 IDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEE---- 227

Query: 271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL 330
                             P   L+              +  P                  
Sbjct: 228 -----------------NPFCELEE--------TVEAAIHPP------------------ 244

Query: 331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                      + +L  L+ GLL+  P  R T  + +  P+ T+ 
Sbjct: 245 --------YLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP 281

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  105 bits (264), Expect = 9e-26
 Identities = 64/334 (19%), Positives = 116/334 (34%), Gaps = 50/334 (14%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
           S++G G  G V +   +    ++A K++    K      I  E++VL +           
Sbjct: 39  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE--------CNS 90

Query: 107 VQIRNW---FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             I  +   F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ 
Sbjct: 91  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLR 148

Query: 163 D-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 220
           +   ++H D+KP N+L+ S                              IK+ DFG S  
Sbjct: 149 EKHKIMHRDVKPSNILVNSR---------------------------GEIKLCDFGVSGQ 181

Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                 N  V TR Y +PE + G  ++   DIWS+G  LVE+  G       +  E   M
Sbjct: 182 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 241

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
               +         R         R       +        + +  +       +     
Sbjct: 242 FGCQVEGDAAETPPR----PRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVF 297

Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           S  +    +   L  +P +R   ++ + H F  R
Sbjct: 298 SL-EFQDFVNKCLIKNPAERADLKQLMVHAFIKR 330

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 98.9 bits (247), Expect = 9e-24
 Identities = 68/349 (19%), Positives = 124/349 (35%), Gaps = 115/349 (32%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-----EIEVLQQLAKHDKGGNRC 106
           GEG++G+V E  D E     A+KI++  K  R          EI++L++L +H       
Sbjct: 14  GEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RH------- 65

Query: 107 VQIRN--------WFDYRNHICIVFE--KLGSS-LYDFLRKNNYRSFPIDLVREIARQLL 155
              +N        + + +  + +V E    G   + D + +   + FP+        QL+
Sbjct: 66  ---KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPE---KRFPVCQAHGYFCQLI 119

Query: 156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
           + + ++H   ++H D+KP N+LL             +                  +K+  
Sbjct: 120 DGLEYLHSQGIVHKDIKPGNLLL---------TTGGT------------------LKISA 152

Query: 216 FG-STTYERPDQNYIVSTR----HYRAPEVILGLGWTY---PCDIWSVGCILVELCTGEA 267
            G +        +    T      ++ PE+  GL  T+     DIWS G  L  + TG  
Sbjct: 153 LGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLD-TFSGFKVDIWSAGVTLYNITTGLY 211

Query: 268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 327
            F+  +N+  L                       + + +G    P               
Sbjct: 212 PFE-GDNIYKLF----------------------ENIGKGSYAIP--------------- 233

Query: 328 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                            L+ LL+G+L Y+P  R + R+  +H +F + H
Sbjct: 234 -----------GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH 271

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =   99 bits (249), Expect = 1e-23
 Identities = 55/329 (16%), Positives = 109/329 (33%), Gaps = 31/329 (9%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 108
           G      V     +   E V ++ +       +       E+ V +    H    N  V 
Sbjct: 36  GFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF-NHP---N-IVP 90

Query: 109 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
            R  F   N + +V   +   S  D +  +         +  I + +L+ + ++H +  +
Sbjct: 91  YRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYV 150

Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H  +K  ++L+     + +   +S+       S      +   +                
Sbjct: 151 HRSVKASHILISVDGKVYLSGLRSN------LSMISHGQRQRVVHDF-----------PK 193

Query: 228 YIVSTRHYRAPEVI--LGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
           Y V    + +PEV+     G+    DI+SVG    EL  G   F+     +   ++E++ 
Sbjct: 194 YSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKLN 251

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
           G +P  +        E  +   R     G +   +  +             H   S    
Sbjct: 252 GTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSP-HF 310

Query: 346 THLLQGLLRYDPTDRLTAREALRHPFFTR 374
            H ++  L+ +P  R +A   L H FF +
Sbjct: 311 HHFVEQCLQRNPDARPSASTLLNHSFFKQ 339

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 98.5 bits (246), Expect = 2e-23
 Identities = 65/332 (19%), Positives = 112/332 (33%), Gaps = 90/332 (27%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIV-RGIKKYREAAMI--EIEVLQQLAKHDKGGNRCVQ 108
           G+G F +V           VAIKI+ +          +  E+ +++ L  H       V+
Sbjct: 24  GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-NHP----NIVK 78

Query: 109 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           +    +    + ++ E   G  ++D+L  +          R   RQ++  + + H   ++
Sbjct: 79  LFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYCHQKRIV 136

Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DLK EN+LL         D   +                  IK+ DFG +        
Sbjct: 137 HRDLKAENLLL---------DADMN------------------IKIADFGFSNEFTVGGK 169

Query: 228 YIVS--TRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
                    Y APE+  G  +  P  D+WS+G IL  L +G   F   +NL+ L      
Sbjct: 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNLKEL------ 222

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
                            + V RG+   P                           + + D
Sbjct: 223 ----------------RERVLRGKYRIPF--------------------------YMSTD 240

Query: 345 LTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
             +LL+  L  +P  R T  + ++  +    H
Sbjct: 241 CENLLKRFLVLNPIKRGTLEQIMKDRWINAGH 272

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 98.5 bits (246), Expect = 2e-23
 Identities = 71/332 (21%), Positives = 123/332 (37%), Gaps = 90/332 (27%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRCV 107
           GEG+FG+V      + ++ VA+K +  + +KK      +  EI  L+ L +H       +
Sbjct: 18  GEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHP----HII 72

Query: 108 QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 167
           ++ +       I +V E  G  L+D++ +   +    D  R   +Q++  I + H   ++
Sbjct: 73  KLYDVITTPTDIVMVIEYAGGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHKIV 130

Query: 168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 227
           H DLKPEN+LL         D   +                  +K+ DFG +        
Sbjct: 131 HRDLKPENLLL---------DDNLN------------------VKIADFGLSNIMTDGNF 163

Query: 228 YIVS--TRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
              S  + +Y APEVI G  +  P  D+WS G +L  +  G   F   E +         
Sbjct: 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD-DEFI--------- 213

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
                 ++ K+        V       P                          D  +  
Sbjct: 214 -----PNLFKK--------VNSCVYVMP--------------------------DFLSPG 234

Query: 345 LTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
              L++ ++  DP  R+T +E  R P+F  + 
Sbjct: 235 AQSLIRRMIVADPMQRITIQEIRRDPWFNVNL 266

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 97.7 bits (244), Expect = 2e-23
 Identities = 66/332 (19%), Positives = 113/332 (34%), Gaps = 89/332 (26%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 107
           GEG+F  V+   +       AIKI+    I K  +      E +V+ +L  H       V
Sbjct: 39  GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP----FFV 93

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++   F     +           L  ++RK    SF     R    +++  + ++H   +
Sbjct: 94  KLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKGI 151

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           IH DLKPEN+LL    +I++ D+ ++          K +            +        
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTA----------KVLSP------ESKQARANS---- 191

Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 286
              V T  Y +PE++         D+W++GCI+ +L  G   F    N     + ++++ 
Sbjct: 192 --FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGN--EYLIFQKII- 245

Query: 287 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT 346
                              +   D+P                       +     A D  
Sbjct: 246 -------------------KLEYDFP-----------------------EKFFPKARD-- 261

Query: 347 HLLQGLLRYDPTDRLT------AREALRHPFF 372
            L++ LL  D T RL             HPFF
Sbjct: 262 -LVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 97.4 bits (243), Expect = 3e-23
 Identities = 58/242 (23%), Positives = 97/242 (40%), Gaps = 43/242 (17%)

Query: 46  KIHSKMGEGTFGQVLE-CWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++   +G G FG V +  W   R + VAIK +   +  R+A ++E+  L ++  H     
Sbjct: 11  EVEEVVGRGAFGVVCKAKW---RAKDVAIKQIES-ESERKAFIVELRQLSRV-NHP---- 61

Query: 105 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRS-FPIDLVREIARQLLECIAFMH 162
             V++       N +C+V E   G SLY+ L        +          Q  + +A++H
Sbjct: 62  NIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119

Query: 163 DLC---MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +    +IH DLKP N+LLV+   +                          +K+ DFG+ 
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTV--------------------------LKICDFGTA 153

Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
              +        +  + APEV  G  ++  CD++S G IL E+ T    F          
Sbjct: 154 CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI 213

Query: 280 MM 281
           M 
Sbjct: 214 MW 215

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 96.2 bits (240), Expect = 6e-23
 Identities = 59/256 (23%), Positives = 94/256 (36%), Gaps = 54/256 (21%)

Query: 46  KIHSKMGEGTFGQVLE-CWDRERKEMVAIKIVRGIKKYREAAMI-----EIEVLQQLAKH 99
            +   +G G FG+V    W     + VA+K  R       +  I     E ++   L KH
Sbjct: 10  TLEEIIGIGGFGKVYRAFW---IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KH 65

Query: 100 D-----KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 153
                 +G   C++         ++C+V E   G  L   L     +  P D++   A Q
Sbjct: 66  PNIIALRGV--CLK-------EPNLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQ 113

Query: 154 LLECIAFMHDLC---MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 210
           +   + ++HD     +IH DLK  N+L+                             +  
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILI-------------------LQKVENGDLSNKI 154

Query: 211 IKVIDFGSTTYERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
           +K+ DFG                  + APEVI    ++   D+WS G +L EL TGE  F
Sbjct: 155 LKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214

Query: 270 QTHENLEHLAMMERVL 285
                ++ LA+   V 
Sbjct: 215 ---RGIDGLAVAYGVA 227

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 97.0 bits (242), Expect = 1e-22
 Identities = 69/328 (21%), Positives = 108/328 (32%), Gaps = 79/328 (24%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN 111
           G G FG      D+  KE+VA+K +       E    EI   + L +H       V+ + 
Sbjct: 29  GSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL-RHP----NIVRFKE 83

Query: 112 WFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTD 170
                 H+ I+ E   G  LY+ +       F  D  R   +QLL  +++ H + + H D
Sbjct: 84  VILTPTHLAIIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQICHRD 141

Query: 171 LKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NY 228
           LK EN LL                   D S   R      +K+ DFG +           
Sbjct: 142 LKLENTLL-------------------DGSPAPR------LKICDFGYSKSSVLHSQPKS 176

Query: 229 IVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGP 287
            V T  Y APEV+L   +     D+WS G  L  +  G   F+                 
Sbjct: 177 TVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEEPRDY-------- 227

Query: 288 LPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH 347
                     R   + +   +   P+                            + +  H
Sbjct: 228 ----------RKTIQRILSVKYSIPDDI------------------------RISPECCH 253

Query: 348 LLQGLLRYDPTDRLTAREALRHPFFTRD 375
           L+  +   DP  R++  E   H +F ++
Sbjct: 254 LISRIFVADPATRISIPEIKTHSWFLKN 281

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 93.8 bits (234), Expect = 4e-22
 Identities = 75/334 (22%), Positives = 121/334 (36%), Gaps = 95/334 (28%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRCV 107
           G GTFG+V     +     VA+KI+  + I+       I  EI+ L+   +H       +
Sbjct: 20  GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHP----HII 74

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++           +V E + G  L+D++ K+          R + +Q+L  + + H   +
Sbjct: 75  KLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDYCHRHMV 132

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKPENVLL         D   +                   K+ DFG +      +
Sbjct: 133 VHRDLKPENVLL---------DAHMN------------------AKIADFGLSNMMSDGE 165

Query: 227 NYIVSTR----HYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
              + T     +Y APEVI G  +  P  DIWS G IL  L  G   F   E++      
Sbjct: 166 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD-DEHV------ 216

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
                     + K+        +R G    P                          ++ 
Sbjct: 217 --------PTLFKK--------IRGGVFYIP--------------------------EYL 234

Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
              +  LL  +L+ DP  R T ++   H +F +D
Sbjct: 235 NRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD 268

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 93.5 bits (233), Expect = 5e-22
 Identities = 48/253 (18%), Positives = 82/253 (32%), Gaps = 56/253 (22%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--------EIEVLQQLA 97
           +   ++G+G FG V +    + K +VAIK +       E  MI        E+ ++  L 
Sbjct: 22  EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL- 80

Query: 98  KHD-----KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIA 151
            H       G                  +V E +    LY  L           +   + 
Sbjct: 81  NHPNIVKLYGL--MHN---------PPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLM 128

Query: 152 RQLLECIAFMHDL--CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 209
             +   I +M +    ++H DL+  N+ L S +                           
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD----------------------ENAPV 166

Query: 210 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEA 267
             KV DFG +       + ++    + APE I     +Y    D +S   IL  + TGE 
Sbjct: 167 CAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226

Query: 268 LFQTHENLEHLAM 280
            F   +   +  +
Sbjct: 227 PF---DEYSYGKI 236

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 96.0 bits (239), Expect = 7e-22
 Identities = 72/332 (21%), Positives = 121/332 (36%), Gaps = 87/332 (26%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIE--VLQQLAKHDKGGNRCV 107
           G+G FG+V  C  R   +M A K +    IKK +  AM   E  +L++           V
Sbjct: 193 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK-VNS----RFVV 247

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
            +   ++ ++ +C+V   + G  L   +       FP       A ++   +  +H   +
Sbjct: 248 SLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI 307

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           ++ DLKPEN+LL    +I++ D   +                     +  G T   R   
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLA-------------------VHVPEGQTIKGR--- 345

Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLAMMERVL 285
              V T  Y APEV+    +T+  D W++GC+L E+  G++ FQ   + ++   +   V 
Sbjct: 346 ---VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK 402

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                                   ++ E   S ++                         
Sbjct: 403 --------------------EVPEEYSER-FSPQAR------------------------ 417

Query: 346 THLLQGLLRYDPTDRL-----TAREALRHPFF 372
             L   LL  DP +RL     +ARE   HP F
Sbjct: 418 -SLCSQLLCKDPAERLGCRGGSAREVKEHPLF 448

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 95.0 bits (236), Expect = 2e-21
 Identities = 66/335 (19%), Positives = 118/335 (35%), Gaps = 93/335 (27%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIE--VLQQLAKHDKGGNRC- 106
           G G FG+V  C   +  +M A+K +    IK  +   +   E  +L  ++  D     C 
Sbjct: 198 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-----CP 252

Query: 107 --VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             V +   F   + +  + + + G  L+  L ++    F    +R  A +++  +  MH+
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHN 310

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             +++ DLKP N+LL    ++++ D   +    K                       +  
Sbjct: 311 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--------------------KPHAS 350

Query: 224 PDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
                 V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+  +   +  
Sbjct: 351 ------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 404

Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
             L                       ++ P                              
Sbjct: 405 MTL--------------------TMAVELP-----------------------DSFSPEL 421

Query: 343 GDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
                LL+GLL+ D   RL      A+E    PFF
Sbjct: 422 RS---LLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 91.1 bits (227), Expect = 3e-21
 Identities = 62/335 (18%), Positives = 115/335 (34%), Gaps = 93/335 (27%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHDKGGNRCVQI 109
           GEG +G+V    +R  +E VA+KIV   +       I  EI + + L  H+      V+ 
Sbjct: 16  GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHE----NVVKF 70

Query: 110 RNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                  N   +  E   G  L+D +  +     P    +    QL+  + ++H + + H
Sbjct: 71  YGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITH 128

Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPDQN 227
            D+KPEN+LL                   D            +K+ DFG +T +   ++ 
Sbjct: 129 RDIKPENLLL-------------------DERD--------NLKISDFGLATVFRYNNRE 161

Query: 228 YIVSTR----HYRAPEVILGLGWTY---PCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
            +++       Y APE++      +   P D+WS G +L  +  GE  +    +      
Sbjct: 162 RLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPWDQPSD------ 213

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
                               + Y       W                        + +D 
Sbjct: 214 --------SCQEYSDWKE-KKTY----LNPW------------------------KKIDS 236

Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
           +      LL  +L  +P+ R+T  +  +  ++ + 
Sbjct: 237 AP---LALLHKILVENPSARITIPDIKKDRWYNKP 268

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 91.6 bits (228), Expect = 4e-21
 Identities = 58/356 (16%), Positives = 112/356 (31%), Gaps = 112/356 (31%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCV-- 107
           G+G++G V   ++       A+K++  + + +             + A       R    
Sbjct: 22  GKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIE 81

Query: 108 QIRN-------------------WFDY-RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDL 146
           Q+                       D   +H+ +VFE +    + +            D 
Sbjct: 82  QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK---PLSEDQ 138

Query: 147 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 206
            R   + L++ I ++H   +IH D+KP N+L+                            
Sbjct: 139 ARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV-------------------GEDG----- 174

Query: 207 KSSAIKVIDFG-STTYERPDQNYIVSTR----HYRAPEVILGLGWTY---PCDIWSVGCI 258
               IK+ DFG S  ++  D   ++S       + APE +      +     D+W++G  
Sbjct: 175 ---HIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVT 229

Query: 259 LVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASR 318
           L     G+  F   E +                +  +        ++   L++P+     
Sbjct: 230 LYCFVFGQCPFM-DERI--------------MCLHSK--------IKSQALEFPD----- 261

Query: 319 ESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                               D +  DL  L+  +L  +P  R+   E   HP+ TR
Sbjct: 262 ------------------QPDIAE-DLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 90.5 bits (225), Expect = 9e-21
 Identities = 79/336 (23%), Positives = 123/336 (36%), Gaps = 91/336 (27%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHDKGG 103
               K+G+G+FG+V +  D   +++VAIKI+   +   E   I  EI VL Q        
Sbjct: 25  TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPY-- 81

Query: 104 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
               +    +     + I+ E L G S  D L            +  I R++L+ + ++H
Sbjct: 82  --VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLH 136

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---ST 219
               IH D+K  NVLL                                +K+ DFG     
Sbjct: 137 SEKKIHRDIKAANVLLSE---------------------------HGEVKLADFGVAGQL 169

Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA-LFQTHENLEHL 278
           T  +  +N  V T  + APEVI    +    DIWS+G   +EL  GE    + H      
Sbjct: 170 TDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH------ 223

Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            M  +VL  +P++                                    P L+       
Sbjct: 224 PM--KVLFLIPKN----------------------------------NPPTLEG------ 241

Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
           ++S   L   ++  L  +P+ R TA+E L+H F  R
Sbjct: 242 NYSK-PLKEFVEACLNKEPSFRPTAKELLKHKFILR 276

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 90.5 bits (225), Expect = 1e-20
 Identities = 49/240 (20%), Positives = 96/240 (40%), Gaps = 54/240 (22%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD----- 100
           ++   +G GT+GQV +    +  ++ AIK++       E    EI +L++ + H      
Sbjct: 27  ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATY 86

Query: 101 -----KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 154
                K     +  + W        +V E     S+ D ++     +   + +  I R++
Sbjct: 87  YGAFIKKNPPGMDDQLW--------LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREI 138

Query: 155 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
           L  ++ +H   +IH D+K +NVLL                            +++ +K++
Sbjct: 139 LRGLSHLHQHKVIHRDIKGQNVLLT---------------------------ENAEVKLV 171

Query: 215 DFG---STTYERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 266
           DFG           +N  + T ++ APEVI         + +  D+WS+G   +E+  G 
Sbjct: 172 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 231

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 92.2 bits (229), Expect = 2e-20
 Identities = 62/336 (18%), Positives = 113/336 (33%), Gaps = 92/336 (27%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIE--VLQQLAKHDKGGNRCV 107
           G G FG+V  C  +   ++ A K +    +KK +      +E  +L +           V
Sbjct: 194 GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK-VHS----RFIV 248

Query: 108 QIRNWFDYRNHICIVFE-----KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
            +   F+ +  +C+V        +   +Y+    N    F          Q++  +  +H
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN--PGFQEPRAIFYTAQIVSGLEHLH 306

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              +I+ DLKPENVLL     +++ D                     A+++    + T  
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDL------------------GLAVELKAGQTKTKG 348

Query: 223 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLAMM 281
                    T  + APE++LG  + +  D +++G  L E+      F+   E +E+  + 
Sbjct: 349 Y------AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
           +RVL                       + +P+   S  S                     
Sbjct: 403 QRVL--------------------EQAVTYPDK-FSPASK-------------------- 421

Query: 342 AGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
                   + LL+ DP  RL     +      HP F
Sbjct: 422 -----DFCEALLQKDPEKRLGFRDGSCDGLRTHPLF 452

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 91.8 bits (228), Expect = 2e-20
 Identities = 75/334 (22%), Positives = 121/334 (36%), Gaps = 95/334 (28%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRCV 107
           G GTFG+V           VA+KI+  + I+       I  EI+ L+   +H       +
Sbjct: 25  GVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHP----HII 79

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++       + I +V E + G  L+D++ KN          R + +Q+L  + + H   +
Sbjct: 80  KLYQVISTPSDIFMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRHMV 137

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H DLKPENVLL         D   +                   K+ DFG +      +
Sbjct: 138 VHRDLKPENVLL---------DAHMN------------------AKIADFGLSNMMSDGE 170

Query: 227 NYIVSTR----HYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
              + T     +Y APEVI G  +  P  DIWS G IL  L  G   F   +++      
Sbjct: 171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD-DDHV------ 221

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
                     + K+        +  G    P                           + 
Sbjct: 222 --------PTLFKK--------ICDGIFYTP--------------------------QYL 239

Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
              +  LL+ +L+ DP  R T ++   H +F +D
Sbjct: 240 NPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 90.1 bits (224), Expect = 2e-20
 Identities = 62/335 (18%), Positives = 115/335 (34%), Gaps = 93/335 (27%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHDKGGNRCVQI 109
           GEG +G+V    +R  +E VA+KIV   +       I  EI + + L  H+      V+ 
Sbjct: 16  GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHEN----VVKF 70

Query: 110 RNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 168
                  N   +  E   G  L+D +  +     P    +    QL+  + ++H + + H
Sbjct: 71  YGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITH 128

Query: 169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPDQN 227
            D+KPEN+LL                   D            +K+ DFG +T +   ++ 
Sbjct: 129 RDIKPENLLL-------------------DERD--------NLKISDFGLATVFRYNNRE 161

Query: 228 YIVSTR----HYRAPEVILGLGWTY---PCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
            +++       Y APE++      +   P D+WS G +L  +  GE  +    +      
Sbjct: 162 RLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPWDQPSD------ 213

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
                               + Y       W                        + +D 
Sbjct: 214 --------SCQEYSDWKE-KKTY----LNPW------------------------KKIDS 236

Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
           +      LL  +L  +P+ R+T  +  +  ++ + 
Sbjct: 237 AP---LALLHKILVENPSARITIPDIKKDRWYNKP 268

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 89.7 bits (223), Expect = 2e-20
 Identities = 69/337 (20%), Positives = 122/337 (36%), Gaps = 92/337 (27%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
            +  K+GEG++G V +   +E  ++VAIK V  ++   +  + EI ++QQ          
Sbjct: 32  DVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP-VESDLQEIIKEISIMQQC--------D 82

Query: 106 CVQIRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
              +  ++        + IV E     S+ D +R  N ++   D +  I +  L+ + ++
Sbjct: 83  SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYL 141

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST-- 219
           H +  IH D+K  N+LL +                               K+ DFG    
Sbjct: 142 HFMRKIHRDIKAGNILLNT---------------------------EGHAKLADFGVAGQ 174

Query: 220 -TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA-LFQTHENLEH 277
            T     +N ++ T  + APEVI  +G+    DIWS+G   +E+  G+      H     
Sbjct: 175 LTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH----- 229

Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 337
             M  R +  +P                                      P  +      
Sbjct: 230 -PM--RAIFMIPT----------------------------------NPPPTFRK----- 247

Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            +  + + T  ++  L   P  R TA + L+HPF   
Sbjct: 248 PELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRS 284

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 88.5 bits (220), Expect = 7e-20
 Identities = 67/331 (20%), Positives = 119/331 (35%), Gaps = 93/331 (28%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 107
           G G+FG+V+    +E     A+KI+    + K ++    + E  +LQ +          V
Sbjct: 50  GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFP----FLV 104

Query: 108 QIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++   F   +++ +V E   G  ++  LR+     F     R  A Q++    ++H L +
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDL 162

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           I+ DLKPEN+L+    Y                           I+V DFG     +   
Sbjct: 163 IYRDLKPENLLIDQQGY---------------------------IQVTDFGFAKRVKGRT 195

Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 286
             +  T    APE+IL  G+    D W++G ++ E+  G   F   +    + + E+++ 
Sbjct: 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQ--PIQIYEKIV- 251

Query: 287 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT 346
                               G++ +P                        H      D  
Sbjct: 252 -------------------SGKVRFP-----------------------SHFSSDLKD-- 267

Query: 347 HLLQGLLRYDPTDRL-----TAREALRHPFF 372
            LL+ LL+ D T R         +   H +F
Sbjct: 268 -LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 88.2 bits (219), Expect = 8e-20
 Identities = 48/225 (21%), Positives = 95/225 (42%), Gaps = 46/225 (20%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKGGNRCVQ 108
           K+GEG+ G V    ++     VA+K++   K+ R   +  E+ +++   +H         
Sbjct: 52  KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-QHF-------N 103

Query: 109 IRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
           +   +        + ++ E L G +L D + +       I     +   +L+ +A++H  
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQI---ATVCEAVLQALAYLHAQ 160

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---STTY 221
            +IH D+K +++LL                                +K+ DFG     + 
Sbjct: 161 GVIHRDIKSDSILLTL---------------------------DGRVKLSDFGFCAQISK 193

Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
           + P +  +V T ++ APEVI    +    DIWS+G +++E+  GE
Sbjct: 194 DVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 87.4 bits (217), Expect = 9e-20
 Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 46/225 (20%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKGGNRCVQ 108
           K+G+G  G V    D    + VAI+ +   ++ ++  +I EI V+++  K+         
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNP-------N 78

Query: 109 IRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
           I N+ D     + + +V E L G SL D + +       I     + R+ L+ + F+H  
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI---AAVCRECLQALEFLHSN 135

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST---TY 221
            +IH D+K +N+LL                               ++K+ DFG     T 
Sbjct: 136 QVIHRDIKSDNILLGM---------------------------DGSVKLTDFGFCAQITP 168

Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
           E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE
Sbjct: 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 86.2 bits (214), Expect = 3e-19
 Identities = 58/250 (23%), Positives = 96/250 (38%), Gaps = 49/250 (19%)

Query: 46  KIHSKMGEGTFGQVLE-CWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDK 101
            I  K+G G+FG V    W       VA+KI+       +     + E+ ++++L +H  
Sbjct: 40  NIKEKIGAGSFGTVHRAEW---HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHP- 94

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYR-SFPIDLVREIARQLLECIA 159
             N  V          ++ IV E L   SLY  L K+  R          +A  + + + 
Sbjct: 95  --N-IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151

Query: 160 FMH--DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           ++H  +  ++H +LK  N+L+                   D  Y         +KV DFG
Sbjct: 152 YLHNRNPPIVHRNLKSPNLLV-------------------DKKY--------TVKVCDFG 184

Query: 218 STTYERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
            +  +        S   T  + APEV+         D++S G IL EL T +  +    N
Sbjct: 185 LSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW---GN 241

Query: 275 LEHLAMMERV 284
           L    ++  V
Sbjct: 242 LNPAQVVAAV 251

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 85.9 bits (213), Expect = 4e-19
 Identities = 50/225 (22%), Positives = 94/225 (41%), Gaps = 38/225 (16%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           +MG GT GQV +   R+   ++A+K +R  G K+  +  +++++V+ +           V
Sbjct: 32  EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP----YIV 87

Query: 108 QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCM 166
           Q    F     + I  E +G+      ++      P  ++ ++   +++ + ++ +   +
Sbjct: 88  QCFGTFITNTDVFIAMELMGTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYYLKEKHGV 146

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           IH D+KP N+LL     IK+ D+  S           R+    A               +
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGIS----------GRLVDDKA---------------K 181

Query: 227 NYIVSTRHYRAPEVI-----LGLGWTYPCDIWSVGCILVELCTGE 266
           +       Y APE I         +    D+WS+G  LVEL TG+
Sbjct: 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 85.4 bits (212), Expect = 4e-19
 Identities = 62/336 (18%), Positives = 118/336 (35%), Gaps = 86/336 (25%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
            ++G G +G V +       +++A+K +R     +E   +  ++++  +           
Sbjct: 13  MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP----FT 68

Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHD- 163
           V           + I  E + +SL  F ++  +  ++ P D++ +IA  +++ +  +H  
Sbjct: 69  VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
           L +IH D+KP NVL+ +   +K+ D+  S            +    A             
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGIS----------GYLVDDVA-------KDID-- 169

Query: 224 PDQNYIVSTRHYRAPEVILG----LGWTYPCDIWSVGCILVELCTGEALFQTHEN-LEHL 278
                    + Y APE I       G++   DIWS+G  ++EL      + +     + L
Sbjct: 170 ------AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL 223

Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
             +  V  P P                  +L  P    S E                   
Sbjct: 224 KQV--VEEPSP------------------QL--PADKFSAE------------------- 242

Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                         L+ +  +R T  E ++HPFFT 
Sbjct: 243 ------FVDFTSQCLKKNSKERPTYPELMQHPFFTL 272

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 85.9 bits (213), Expect = 6e-19
 Identities = 72/337 (21%), Positives = 117/337 (34%), Gaps = 98/337 (29%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNR 105
           ++G G+FG V    D    E+VAIK +   G +   +   I  E+  LQ+L        R
Sbjct: 61  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL--------R 112

Query: 106 CVQIRNWFD---YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
                 +       +   +V E    S  D L  +  +      +  +    L+ +A++H
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLH 171

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTY 221
              MIH D+K  N+LL                                +K+ DFG ++  
Sbjct: 172 SHNMIHRDVKAGNILLSE---------------------------PGLVKLGDFGSASIM 204

Query: 222 ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEA-LFQTHENLEH 277
                N  V T ++ APEVIL +    +    D+WS+G   +EL   +  LF  +     
Sbjct: 205 AP--ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN----- 257

Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 337
            AM    L  + Q+                                  + P LQ+     
Sbjct: 258 -AM--SALYHIAQN----------------------------------ESPALQS----- 275

Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
             H +    + +   L+  P DR T+   L+H F  R
Sbjct: 276 -GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 311

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 84.3 bits (209), Expect = 1e-18
 Identities = 52/250 (20%), Positives = 94/250 (37%), Gaps = 63/250 (25%)

Query: 46  KIHSKMGEGTFGQVLE-CWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHD 100
            +  ++G G+FG V +  W  +    VA+K++  +       +     E+ VL++  +H 
Sbjct: 27  TVGQRIGSGSFGTVYKGKWHGD----VAVKMLN-VTAPTPQQLQAFKNEVGVLRKT-RHV 80

Query: 101 K-----GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 154
                 G                + IV +   GSSLY  L  +    F +  + +IARQ 
Sbjct: 81  NILLFMGY--STA--------PQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQT 129

Query: 155 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
              + ++H   +IH DLK  N + +  +                            +K+ 
Sbjct: 130 ARGMDYLHAKSIIHRDLKSNN-IFLHEDNT--------------------------VKIG 162

Query: 215 DFG-----STTYERPDQNYIVSTRHYRAPEVILGLGW---TYPCDIWSVGCILVELCTGE 266
           DFG     S          +  +  + APEVI        ++  D+++ G +L EL TG+
Sbjct: 163 DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222

Query: 267 ALFQTHENLE 276
             +    N +
Sbjct: 223 LPYSNINNRD 232

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 86.6 bits (214), Expect = 1e-18
 Identities = 69/335 (20%), Positives = 117/335 (34%), Gaps = 95/335 (28%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           +G+G+FG+V+    +   E+ A+KI++          E  M+E  VL    K        
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP----FL 404

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            Q+ + F   + +  V E + G  L           F        A ++   + F+    
Sbjct: 405 TQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 462

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +I+ DLK +NV+L S  +IK+ D+               M K +    I  G TT     
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFG--------------MCKEN----IWDGVTT----- 499

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
                 T  Y APE+I    +    D W+ G +L E+  G+A F+  +  E   + + ++
Sbjct: 500 -KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LFQSIM 555

Query: 286 G---PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
                 P+ M                        S+E++                     
Sbjct: 556 EHNVAYPKSM------------------------SKEAV--------------------- 570

Query: 343 GDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
                + +GL+   P  RL       R+   H FF
Sbjct: 571 ----AICKGLMTKHPGKRLGCGPEGERDIKEHAFF 601

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 85.5 bits (212), Expect = 1e-18
 Identities = 72/346 (20%), Positives = 119/346 (34%), Gaps = 92/346 (26%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 107
           G G F +V     ++  ++ A+KI+    + K  E +    E +VL              
Sbjct: 70  GRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN-GDRR----WIT 124

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           Q+   F   N++ +V E   G  L   L K   R  P ++ R    +++  I  +H L  
Sbjct: 125 QLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSVHRLGY 183

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H D+KP+N+LL    +I++ D+ S L                  K+   G+        
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFGSCL------------------KLRADGTVR-----S 220

Query: 227 NYIVSTRHYRAPEVILGLGWTY-------PCDIWSVGCILVELCTGEALFQTHENLEHLA 279
              V T  Y +PE++  +G           CD W++G    E+  G+  F   ++     
Sbjct: 221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF-YADSTA--E 277

Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
              +++                    +  L  P                       + V 
Sbjct: 278 TYGKIVH------------------YKEHLSLPLVD--------------------EGVP 299

Query: 340 HSAGDLTHLLQGLLRYDPTDRLT---AREALRHPFFTR---DHLRR 379
             A D    +Q LL   P  RL    A +   HPFF     D LR 
Sbjct: 300 EEARD---FIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWDGLRD 341

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 84.2 bits (209), Expect = 3e-18
 Identities = 65/333 (19%), Positives = 116/333 (34%), Gaps = 97/333 (29%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 107
           G+G+FG+V     ++  +  AIK ++   +    +    M+E  VL    +H        
Sbjct: 26  GKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP----FLT 81

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
            +   F  + ++  V E L G  L       +   F +      A +++  + F+H   +
Sbjct: 82  HMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI 139

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE---R 223
           ++ DLK +N+LL    +IK+ D+               M K +    +   + T      
Sbjct: 140 VYRDLKLDNILLDKDGHIKIADFG--------------MCKEN----MLGDAKTNTFCGT 181

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
           PD         Y APE++LG  + +  D WS G +L E+  G++ F   +  E   +   
Sbjct: 182 PD---------YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE---LFHS 229

Query: 284 VLG---PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
           +       P+ +                         +E+                    
Sbjct: 230 IRMDNPFYPRWL------------------------EKEAK------------------- 246

Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALR-HPFF 372
                  LL  L   +P  RL  R  +R HP F
Sbjct: 247 ------DLLVKLFVREPEKRLGVRGDIRQHPLF 273

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 83.4 bits (207), Expect = 5e-18
 Identities = 64/332 (19%), Positives = 125/332 (37%), Gaps = 81/332 (24%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           G G++ +VL    ++   + A+K+V+       +  +    E  V +Q + H       V
Sbjct: 18  GRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH----PFLV 73

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
            + + F   + +  V E + G  L         R  P +  R  + ++   + ++H+  +
Sbjct: 74  GLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYLHERGI 131

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           I+ DLK +NVLL S  +IK+ DY               M K      +  G TT      
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYG--------------MCKEG----LRPGDTT------ 167

Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 286
           +    T +Y APE++ G  + +  D W++G ++ E+  G + F    + ++         
Sbjct: 168 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE--- 224

Query: 287 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT 346
               ++ + +                        ++  +++PR        +   A    
Sbjct: 225 ---DYLFQVI------------------------LEKQIRIPR-------SLSVKAAS-- 248

Query: 347 HLLQGLLRYDPTDRL------TAREALRHPFF 372
            +L+  L  DP +RL         +   HPFF
Sbjct: 249 -VLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 82.4 bits (204), Expect = 5e-18
 Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 8/134 (5%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++  K+G G+FG +    D    E VAIK+     K+ +  + E ++ + +    +GG  
Sbjct: 12  RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI-ESKIYKMM----QGGVG 66

Query: 106 CVQIRNWF-DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
              IR W     ++  +V E LG SL D L     R F +  V  +A Q++  I ++H  
Sbjct: 67  IPTIR-WCGAEGDYNVMVMELLGPSLED-LFNFCSRKFSLKTVLLLADQMISRIEYIHSK 124

Query: 165 CMIHTDLKPENVLL 178
             IH D+KP+N L+
Sbjct: 125 NFIHRDVKPDNFLM 138

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 83.1 bits (206), Expect = 5e-18
 Identities = 64/339 (18%), Positives = 114/339 (33%), Gaps = 88/339 (25%)

Query: 49  SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 106
            ++G G +G V +   +   +++A+K +R     +E   +  +++V+ + +         
Sbjct: 28  GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP----YI 83

Query: 107 VQIRNWFDYRNHICIVFEKLGSSLYDFLRK---NNYRSFPIDLVREIARQLLECIAFMHD 163
           VQ            I  E + +S   F +          P +++ +I    ++ +  + +
Sbjct: 84  VQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE 143

Query: 164 -LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY- 221
            L +IH D+KP N+LL                             S  IK+ DFG +   
Sbjct: 144 NLKIIHRDIKPSNILLDR---------------------------SGNIKLCDFGISGQL 176

Query: 222 -ERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEA-LFQTHENL 275
            +   +      R Y APE I       G+    D+WS+G  L EL TG     + +   
Sbjct: 177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF 236

Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 335
           + L  +  V G  PQ  L                +  E   S                  
Sbjct: 237 DQLTQV--VKGDPPQ--LS---------------NSEEREFSPS---------------- 261

Query: 336 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                      + +   L  D + R   +E L+HPF   
Sbjct: 262 ---------FINFVNLCLTKDESKRPKYKELLKHPFILM 291

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 82.6 bits (205), Expect = 6e-18
 Identities = 69/340 (20%), Positives = 115/340 (33%), Gaps = 111/340 (32%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 107
           G G+FG+V     R      A+K+++   + + ++      E  +L  +  H       +
Sbjct: 15  GTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THP----FII 69

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           ++   F     I ++ + + G  L+  LRK   + FP  + +  A ++   + ++H   +
Sbjct: 70  RMWGTFQDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKDI 127

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG------STT 220
           I+ DLKPEN+LL         D     H                IK+ DFG        T
Sbjct: 128 IYRDLKPENILL---------DKNG--H----------------IKITDFGFAKYVPDVT 160

Query: 221 YER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
           Y     PD         Y APEV+    +    D WS G ++ E+  G   F    N   
Sbjct: 161 YTLCGTPD---------YIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF-YDSN--T 208

Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 337
           +   E++L                       L +P                         
Sbjct: 209 MKTYEKIL--------------------NAELRFP-----------------------PF 225

Query: 338 VDHSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
            +    D   LL  L+  D + RL        +   HP+F
Sbjct: 226 FNEDVKD---LLSRLITRDLSQRLGNLQNGTEDVKNHPWF 262

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 82.4 bits (204), Expect = 6e-18
 Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 43/231 (18%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKGGN 104
           +I  ++G+G FG+V +  ++E   + A K++    +      I EIE+L     H     
Sbjct: 22  EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-DHPY--- 77

Query: 105 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             V++   + +   + I+ E   G ++   + + + R      ++ + RQ+LE + F+H 
Sbjct: 78  -IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHS 135

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST---T 220
             +IH DLK  NVL+                                I++ DFG +    
Sbjct: 136 KRIIHRDLKAGNVLMTL---------------------------EGDIRLADFGVSAKNL 168

Query: 221 YERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 266
                ++  + T ++ APEV++        + Y  DIWS+G  L+E+   E
Sbjct: 169 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 82.8 bits (205), Expect = 6e-18
 Identities = 52/260 (20%), Positives = 93/260 (35%), Gaps = 60/260 (23%)

Query: 46  KIHSKMGEGTFGQVLE-CWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDK 101
           +I   +G+G FGQV    W  E    VAI+++      +   +A   E+   +Q  +H+ 
Sbjct: 36  EIGELIGKGRFGQVYHGRWHGE----VAIRLIDIERDNEDQLKAFKREVMAYRQT-RHEN 90

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                V          H+ I+     G +LY  +R        ++  R+IA+++++ + +
Sbjct: 91  ----VVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGY 145

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   ++H DLK +NV           D                      + + DFG  +
Sbjct: 146 LHAKGILHKDLKSKNVFY---------DNGK-------------------VVITDFGLFS 177

Query: 221 YERPDQNYIVS--------TRHYRAPEVILGLGWTYP---------CDIWSVGCILVELC 263
                Q                + APE+I  L               D++++G I  EL 
Sbjct: 178 ISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELH 237

Query: 264 TGEALFQTHENLEHLAMMER 283
             E  F+T      +  M  
Sbjct: 238 AREWPFKTQPAEAIIWQMGT 257

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 83.6 bits (207), Expect = 7e-18
 Identities = 63/332 (18%), Positives = 125/332 (37%), Gaps = 81/332 (24%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHDKGGNRCV 107
           G G++ +VL    ++   + A+++V+       +  +    E  V +Q + H       V
Sbjct: 61  GRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH----PFLV 116

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
            + + F   + +  V E + G  L         R  P +  R  + ++   + ++H+  +
Sbjct: 117 GLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYLHERGI 174

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           I+ DLK +NVLL S  +IK+ DY               M K      +  G TT      
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYG--------------MCKEG----LRPGDTT------ 210

Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 286
           +    T +Y APE++ G  + +  D W++G ++ E+  G + F    + ++         
Sbjct: 211 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE--- 267

Query: 287 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT 346
               ++ + +                        ++  +++PR        +   A    
Sbjct: 268 ---DYLFQVI------------------------LEKQIRIPR-------SLSVKAAS-- 291

Query: 347 HLLQGLLRYDPTDRL------TAREALRHPFF 372
            +L+  L  DP +RL         +   HPFF
Sbjct: 292 -VLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 82.4 bits (204), Expect = 7e-18
 Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 8/134 (5%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++  K+G G FG++    +    E VAIK+     +      +E    +QL      G+ 
Sbjct: 12  RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAP-QLHLEYRFYKQL----GSGDG 66

Query: 106 CVQIRNWF-DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
             Q+  +F     +  +V E LG SL D L     R+F +  V  IA QL+  + ++H  
Sbjct: 67  IPQVY-YFGPCGKYNAMVLELLGPSLED-LFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 124

Query: 165 CMIHTDLKPENVLL 178
            +I+ D+KPEN L+
Sbjct: 125 NLIYRDVKPENFLI 138

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 83.5 bits (206), Expect = 9e-18
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 8/134 (5%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++  K+G G+FG++    + +  E VAIK+     K+ +    E ++ + L    +GG  
Sbjct: 10  RLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLY-ESKIYRIL----QGGTG 64

Query: 106 CVQIRNWF-DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
              +R WF    ++  +V + LG SL D L     R   +  V  +A Q++  + F+H  
Sbjct: 65  IPNVR-WFGVEGDYNVLVMDLLGPSLED-LFNFCSRKLSLKTVLMLADQMINRVEFVHSK 122

Query: 165 CMIHTDLKPENVLL 178
             +H D+KP+N L+
Sbjct: 123 SFLHRDIKPDNFLM 136

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 81.2 bits (201), Expect = 2e-17
 Identities = 71/351 (20%), Positives = 122/351 (34%), Gaps = 97/351 (27%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHDKGG 103
           ++   +G G    V   +   +KE VAIK +   K       +  EI+ + Q   H    
Sbjct: 18  ELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC-HHP--- 73

Query: 104 NRCVQIRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLV---REIA---RQ 153
                I +++     ++ + +V + L G S+ D ++    +      V     IA   R+
Sbjct: 74  ----NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129

Query: 154 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 213
           +LE + ++H    IH D+K  N+LL                               ++++
Sbjct: 130 VLEGLEYLHKNGQIHRDVKAGNILLGE---------------------------DGSVQI 162

Query: 214 IDFG-----STTYERPDQ---NYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCT 264
            DFG     +T  +          V T  + APEV+    G+ +  DIWS G   +EL T
Sbjct: 163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT 222

Query: 265 GEA-LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 323
           G A   +         M  +VL    Q+    ++   +      +         +     
Sbjct: 223 GAAPYHKYP------PM--KVLMLTLQNDPPSLETGVQDKEMLKKY-------GKS---- 263

Query: 324 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                                   ++   L+ DP  R TA E LRH FF +
Sbjct: 264 ---------------------FRKMISLCLQKDPEKRPTAAELLRHKFFQK 293

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 81.5 bits (202), Expect = 2e-17
 Identities = 69/337 (20%), Positives = 119/337 (35%), Gaps = 101/337 (29%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 107
           G+G+FG+V+    +   E+ A+KI++   + +  +    M+E  VL    K         
Sbjct: 29  GKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP----FLT 84

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           Q+ + F   + +  V E + G  L           F        A ++   + F+    +
Sbjct: 85  QLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 142

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE---R 223
           I+ DLK +NV+L S  +IK+ D+               M K +    I  G TT      
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFG--------------MCKEN----IWDGVTTKTFCGT 184

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
           PD         Y APE+I    +    D W+ G +L E+  G+A F   E+ +   + + 
Sbjct: 185 PD---------YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF-EGEDEDE--LFQS 232

Query: 284 VLG---PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
           ++      P+ M                        S+E++                   
Sbjct: 233 IMEHNVAYPKSM------------------------SKEAV------------------- 249

Query: 341 SAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
                  + +GL+   P  RL       R+   H FF
Sbjct: 250 ------AICKGLMTKHPGKRLGCGPEGERDIKEHAFF 280

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 80.8 bits (200), Expect = 3e-17
 Identities = 43/231 (18%), Positives = 91/231 (39%), Gaps = 34/231 (14%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDK--- 101
                +G+G FGQ ++   RE  E++ +K +    +  +   + E++V++ L +H     
Sbjct: 13  IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLK 71

Query: 102 --GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
             G     +          +  + E + G +L   ++  +   +P       A+ +   +
Sbjct: 72  FIGV--LYK-------DKRLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGM 121

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF---KRMPKSSAIKVID 215
           A++H + +IH DL   N L+  ++ + V D             F   + M          
Sbjct: 122 AYLHSMNIIHRDLNSHNCLVRENKNVVVAD-------------FGLARLMVDEKTQPEGL 168

Query: 216 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
                 +R  +  +V   ++ APE+I G  +    D++S G +L E+    
Sbjct: 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRV 219

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 80.0 bits (198), Expect = 3e-17
 Identities = 37/255 (14%), Positives = 77/255 (30%), Gaps = 60/255 (23%)

Query: 46  KIHSKMGEGTFGQVLE-CWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHD 100
              +K+ E   G++ +  W   +   + +K+++ ++ +          E   L+    H 
Sbjct: 13  NFLTKLNENHSGELWKGRW---QGNDIVVKVLK-VRDWSTRKSRDFNEECPRLRIF-SHP 67

Query: 101 -----KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 154
                 G   C           H  ++   +   SLY+ L +            + A  +
Sbjct: 68  NVLPVLGA--CQS-----PPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDM 120

Query: 155 LECIAFMHDL--CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
              +AF+H L   +    L   +V++                   D             +
Sbjct: 121 ARGMAFLHTLEPLIPRHALNSRSVMI-------------------DEDM--------TAR 153

Query: 213 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYP---CDIWSVGCILVELCTGEALF 269
           +                +    + APE +            D+WS   +L EL T E  F
Sbjct: 154 ISMADVKFSF--QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF 211

Query: 270 QTHENLEHLAMMERV 284
               +L ++ +  +V
Sbjct: 212 ---ADLSNMEIGMKV 223

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 80.1 bits (198), Expect = 4e-17
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 8/134 (5%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++GEG+FG + E  +    + VAIK         +    E    + L     G   
Sbjct: 13  KVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRD-EYRTYKLL----AGCTG 67

Query: 106 CVQIRNWF-DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
              +  +F     H  +V + LG SL D L     R F +  V   A+Q+L  +  +H+ 
Sbjct: 68  IPNVY-YFGQEGLHNVLVIDLLGPSLED-LLDLCGRKFSVKTVAMAAKQMLARVQSIHEK 125

Query: 165 CMIHTDLKPENVLL 178
            +++ D+KP+N L+
Sbjct: 126 SLVYRDIKPDNFLI 139

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 80.8 bits (200), Expect = 5e-17
 Identities = 55/333 (16%), Positives = 113/333 (33%), Gaps = 93/333 (27%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRC- 106
           G+G+FG+V      + K+M A+K +      +  E      E++++Q L           
Sbjct: 24  GKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL--------EHP 75

Query: 107 --VQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             V +   F     + +V +  LG  L   L++N    F  + V+    +L+  + ++ +
Sbjct: 76  FLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQN 133

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             +IH D+KP+N+LL    ++ + D+  +                    ++   +     
Sbjct: 134 QRIIHRDMKPDNILLDEHGHVHITDFNIA-------------------AMLPRETQITT- 173

Query: 224 PDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                +  T+ Y APE+     G G+++  D WS+G    EL  G   +    +     +
Sbjct: 174 -----MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEI 228

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
           +                           + +P   +                        
Sbjct: 229 VHTFE--------------------TTVVTYPSAWSQ----------------------- 245

Query: 341 SAGDLTHLLQGLLRYDPTDRL-TAREALRHPFF 372
              ++  LL+ LL  +P  R     +    P+ 
Sbjct: 246 ---EMVSLLKKLLEPNPDQRFSQLSDVQNFPYM 275

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 80.9 bits (200), Expect = 5e-17
 Identities = 66/333 (19%), Positives = 119/333 (35%), Gaps = 89/333 (26%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 107
           G G FG+V     +  +++ A+K++    + K  ++A    E +++   A         V
Sbjct: 78  GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-ANSP----WVV 132

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           Q+   F    ++ +V E + G  L + +        P    R    +++  +  +H +  
Sbjct: 133 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGF 189

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           IH D+KP+N+LL  S ++K+ D+ +            +M K   ++      T    PD 
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTC----------MKMNKEGMVRCDTAVGT----PD- 234

Query: 227 NYIVSTRHYRAPEVILGLGWTYP----CDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
                   Y +PEV+   G        CD WSVG  L E+  G+  F   ++L       
Sbjct: 235 --------YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF-YADSLV--GTYS 283

Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
           +++                    +  L +P+     +  K+                   
Sbjct: 284 KIMN------------------HKNSLTFPDDNDISKEAKN------------------- 306

Query: 343 GDLTHLLQGLLRYDPTDRLT---AREALRHPFF 372
                L+   L  D   RL      E  RH FF
Sbjct: 307 -----LICAFLT-DREVRLGRNGVEEIKRHLFF 333

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 80.4 bits (199), Expect = 6e-17
 Identities = 69/335 (20%), Positives = 117/335 (34%), Gaps = 96/335 (28%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 107
           G+G+FG+V+    +E  ++ A+K+++   I +  +    M E  +L     H        
Sbjct: 32  GKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP----FLT 87

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
           Q+   F   + +  V E + G  L         R F     R  A +++  + F+HD  +
Sbjct: 88  QLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIISALMFLHDKGI 145

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           I+ DLK +NVLL    + K+ D+               M K      I  G TT      
Sbjct: 146 IYRDLKLDNVLLDHEGHCKLADFG--------------MCKEG----ICNGVTT------ 181

Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 286
                T  Y APE++  + +    D W++G +L E+  G A F+     +   + E +L 
Sbjct: 182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD---LFEAILN 238

Query: 287 ---PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
                P  +                          ++                       
Sbjct: 239 DEVVYPTWL------------------------HEDAT---------------------- 252

Query: 344 DLTHLLQGLLRYDPTDRL------TAREALRHPFF 372
               +L+  +  +PT RL           LRHPFF
Sbjct: 253 ---GILKSFMTKNPTMRLGSLTQGGEHAILRHPFF 284

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 81.0 bits (200), Expect = 6e-17
 Identities = 66/344 (19%), Positives = 124/344 (36%), Gaps = 90/344 (26%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 107
           G G FG+V     +   ++ A+KI+    + K  E A    E +VL              
Sbjct: 83  GRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDSK----WIT 137

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
            +   F   N++ +V +   G  L   L K   R  P ++ R    +++  I  +H L  
Sbjct: 138 TLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAIDSVHQLHY 196

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           +H D+KP+N+L+  + +I++ D+ S            ++ +   ++      T    PD 
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSC----------LKLMEDGTVQSSVAVGT----PD- 241

Query: 227 NYIVSTRHYRAPEVILGL-----GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
                   Y +PE++  +      +   CD WS+G  + E+  GE  F   E+L      
Sbjct: 242 --------YISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF-YAESLV--ETY 290

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            +++                    + R  +P                         V   
Sbjct: 291 GKIMN------------------HKERFQFP-----------------------TQVTDV 309

Query: 342 AGDLTHLLQGLLRYDPTDRLT---AREALRHPFFTR---DHLRR 379
           + +   L++ L+      RL      +  +HPFF+    D++R 
Sbjct: 310 SENAKDLIRRLIC-SREHRLGQNGIEDFKKHPFFSGIDWDNIRN 352

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 80.0 bits (198), Expect = 7e-17
 Identities = 77/336 (22%), Positives = 122/336 (36%), Gaps = 100/336 (29%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRC- 106
           G+GTFG+V+   ++      A+KI+R   I    E A  + E  VLQ          R  
Sbjct: 14  GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT--------RHP 65

Query: 107 --VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
               ++  F   + +C V E   G  L  F   +  R F  +  R    +++  + ++H 
Sbjct: 66  FLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLHS 123

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             +++ D+K EN++L    +IK+ D+               + K      I  G+T    
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDF--------------GLCKEG----ISDGATM--- 162

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMM 281
                   T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +M
Sbjct: 163 ---KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
           E +    P+ +                        S E+                     
Sbjct: 220 EEI--RFPRTL------------------------SPEAK-------------------- 233

Query: 342 AGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
                 LL GLL+ DP  RL      A+E + H FF
Sbjct: 234 -----SLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 80.2 bits (198), Expect = 1e-16
 Identities = 77/335 (22%), Positives = 126/335 (37%), Gaps = 95/335 (28%)

Query: 51  MGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRC 106
           +G+GTFG+V+   ++      A+KI++   I    E A  + E  VLQ  ++H       
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP----FL 210

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-DL 164
             ++  F   + +C V E   G  L  F   +  R F  D  R    +++  + ++H + 
Sbjct: 211 TALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 268

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +++ DLK EN++L    +IK+ D+               + K      I  G+T     
Sbjct: 269 NVVYRDLKLENLMLDKDGHIKITDF--------------GLCKEG----IKDGATM---- 306

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMME 282
                  T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME
Sbjct: 307 --KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 364

Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
            +    P+ +                          E+                      
Sbjct: 365 EI--RFPRTL------------------------GPEAK--------------------- 377

Query: 343 GDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
                LL GLL+ DP  RL      A+E ++H FF
Sbjct: 378 ----SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 79.6 bits (197), Expect = 1e-16
 Identities = 77/333 (23%), Positives = 122/333 (36%), Gaps = 94/333 (28%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 107
           G+G+FG+VL    +  +   A+K+++   I K +E    M E  VL +  KH       V
Sbjct: 47  GKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP----FLV 102

Query: 108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
            +   F   + +  V + + G  L  F      R F     R  A ++   + ++H L +
Sbjct: 103 GLHFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARFYAAEIASALGYLHSLNI 160

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
           ++ DLKPEN+LL S  +I + D+               + K +    I+  STT      
Sbjct: 161 VYRDLKPENILLDSQGHIVLTDFG--------------LCKEN----IEHNSTTST---- 198

Query: 227 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL- 285
                T  Y APEV+    +    D W +G +L E+  G   F +    E   M + +L 
Sbjct: 199 --FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---MYDNILN 253

Query: 286 GPL--PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
            PL    ++                        +  +                       
Sbjct: 254 KPLQLKPNI------------------------TNSAR---------------------- 267

Query: 344 DLTHLLQGLLRYDPTDRL----TAREALRHPFF 372
              HLL+GLL+ D T RL       E   H FF
Sbjct: 268 ---HLLEGLLQKDRTKRLGAKDDFMEIKSHVFF 297

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 80.7 bits (199), Expect = 1e-16
 Identities = 51/248 (20%), Positives = 93/248 (37%), Gaps = 59/248 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHD 100
           ++   +  G  G +    DR    R   V +K +   G  + +  AM E + L ++  H 
Sbjct: 83  EVKGCIAHGGLGWIYLALDRNVNGRP--VVLKGLVHSGDAEAQAMAMAERQFLAEV-VHP 139

Query: 101 KGGNRCVQIRNWFDYRNHIC-----IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 154
                 VQI N+ ++ +        IV E + G SL         +  P+        ++
Sbjct: 140 ----SIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEI 191

Query: 155 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
           L  ++++H + +++ DLKPEN++L   +                            +K+I
Sbjct: 192 LPALSYLHSIGLVYNDLKPENIMLTEEQ----------------------------LKLI 223

Query: 215 DFG---STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 271
           D G             Y+  T  ++APE++   G T   DI++VG  L  L         
Sbjct: 224 DLGAVSRIN----SFGYLYGTPGFQAPEIVRT-GPTVATDIYTVGRTLAALTLDLPTR-N 277

Query: 272 HENLEHLA 279
              ++ L 
Sbjct: 278 GRYVDGLP 285

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 79.0 bits (195), Expect = 1e-16
 Identities = 31/150 (20%), Positives = 61/150 (40%), Gaps = 22/150 (14%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
            +  K+G G FG +   +   + E  A  +V+   +       E++  Q++AK D     
Sbjct: 40  VLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKW 99

Query: 106 CVQIRN---------WF--------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVR 148
             + +                     YR    +V E+LG  L     +N   +F    V 
Sbjct: 100 IERKQLDYLGIPLFYGSGLTEFKGRSYR---FMVMERLGIDLQKISGQN--GTFKKSTVL 154

Query: 149 EIARQLLECIAFMHDLCMIHTDLKPENVLL 178
           ++  ++L+ + ++H+   +H D+K  N+LL
Sbjct: 155 QLGIRMLDVLEYIHENEYVHGDIKAANLLL 184

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 78.2 bits (193), Expect = 3e-16
 Identities = 29/155 (18%), Positives = 57/155 (36%), Gaps = 29/155 (18%)

Query: 46  KIHSKMGEGTFGQV--------LECWDRERKEMVAIKI-------VRGIKKY-REAAMIE 89
           K+ S       G +        L C    +K+  ++K+             + R A  ++
Sbjct: 45  KLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQ 104

Query: 90  IEVLQQLAKHDKGG-NRCVQIRNWF-----DYRNHICIVFEKLGSSLYDFLRKNNYRSFP 143
           +   ++L          C+     F      YR    +V   LG SL   L  +      
Sbjct: 105 VNKWKKLYSTPLLAIPTCM----GFGVHQDKYR---FLVLPSLGRSLQSALDVSPKHVLS 157

Query: 144 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLL 178
              V ++A +LL+ + F+H+   +H ++  EN+ +
Sbjct: 158 ERSVLQVACRLLDALEFLHENEYVHGNVTAENIFV 192

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 76.4 bits (189), Expect = 1e-15
 Identities = 66/341 (19%), Positives = 127/341 (37%), Gaps = 106/341 (31%)

Query: 52  GEGTFGQVL---ECWDRERKEMVAIKIVRG---IKKYREAA--MIEIEVLQQLAKHDKGG 103
           G+G +G+V    +       ++ A+K+++    ++  ++ A    E  +L+++       
Sbjct: 26  GKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV------- 78

Query: 104 NRC---VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
            +    V +   F     + ++ E L G  L  F++      F  D       ++   + 
Sbjct: 79  -KHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALG 135

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
            +H   +I+ DLKPEN++L    ++K+ D+       K+S              I  G+ 
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLC----KES--------------IHDGTV 177

Query: 220 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
           T+          T  Y APE+++  G     D WS+G ++ ++ TG   F T EN +   
Sbjct: 178 THT------FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGENRK--K 228

Query: 280 MMERVLG---PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            ++++L     LP ++                        ++E+                
Sbjct: 229 TIDKILKCKLNLPPYL------------------------TQEAR--------------- 249

Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
                      LL+ LL+ +   RL      A E   HPFF
Sbjct: 250 ----------DLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 75.0 bits (185), Expect = 2e-15
 Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 57/285 (20%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRE---RKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C +D       E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 71

Query: 101 KGGNRCVQIRN--WFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
                 V+ +   +   R ++ ++ E    GS L D+L+K+  R   I L+ +   Q+ +
Sbjct: 72  N----IVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERIDHIKLL-QYTSQICK 125

Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + ++     IH DL   N+ LV +E                            +K+ DF
Sbjct: 126 GMEYLGTKRYIHRDLATRNI-LVENENR--------------------------VKIGDF 158

Query: 217 GSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 270
           G T     D+ +              APE +    ++   D+WS G +L EL T      
Sbjct: 159 GLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE--- 215

Query: 271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEG 314
             ++    A   R++G   Q  +     H  + ++   RL  P+G
Sbjct: 216 --KSKSPPAEFMRMIGNDKQGQMI--VFHLIELLKNNGRLPRPDG 256

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 75.5 bits (186), Expect = 2e-15
 Identities = 67/285 (23%), Positives = 117/285 (41%), Gaps = 57/285 (20%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRE---RKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 100
           K   ++G+G FG V  C +D       E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 44  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 102

Query: 101 KGGNRCVQIRN--WFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
                 V+ +   +   R ++ ++ E    GS L D+L+K+  R   I L+ +   Q+ +
Sbjct: 103 N----IVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERIDHIKLL-QYTSQICK 156

Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + ++     IH DL   N+ LV +E                            +K+ DF
Sbjct: 157 GMEYLGTKRYIHRDLATRNI-LVENENR--------------------------VKIGDF 189

Query: 217 GSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 270
           G T     D+ Y              APE +    ++   D+WS G +L EL T      
Sbjct: 190 GLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE--- 246

Query: 271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEG 314
             ++    A   R++G   Q  +     H  + ++   RL  P+G
Sbjct: 247 --KSKSPPAEFMRMIGNDKQGQMI--VFHLIELLKNNGRLPRPDG 287

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 74.9 bits (185), Expect = 3e-15
 Identities = 75/339 (22%), Positives = 125/339 (36%), Gaps = 104/339 (30%)

Query: 52  GEGTFGQVL---ECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNR 105
           G+G+FG+V    +    + +++ A+K+++      + R    +E ++L ++         
Sbjct: 33  GQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV--------N 84

Query: 106 C---VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
               V++   F     + ++ + L G  L  F R +    F  + V+    +L   +  +
Sbjct: 85  HPFIVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALALDHL 142

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H L +I+ DLKPEN+LL    +IK+ D+  S    K+S              ID     Y
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES--------------IDHEKKAY 184

Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
                     T  Y APEV+   G T   D WS G ++ E+ TG   FQ  +  E    M
Sbjct: 185 S------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE---TM 235

Query: 282 ERVLG---PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
             +L     +PQ +                        S E+                  
Sbjct: 236 TMILKAKLGMPQFL------------------------SPEAQ----------------- 254

Query: 339 DHSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
                    LL+ L + +P +RL        E  RH FF
Sbjct: 255 --------SLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 75.2 bits (185), Expect = 3e-15
 Identities = 55/302 (18%), Positives = 109/302 (36%), Gaps = 57/302 (18%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
            +   +G+G FG+V    W   R E VA+KI    ++       EI     L +H+   N
Sbjct: 45  VLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSREERSWFREAEIYQTVML-RHE---N 97

Query: 105 ----RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
                    ++       + +V +     SL+D+L +    +  ++ + ++A      +A
Sbjct: 98  ILGFIAADNKD-NGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLA 153

Query: 160 FMHD--------LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 211
            +H           + H DLK +N+L+  +    + D   ++     +      P     
Sbjct: 154 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR-- 211

Query: 212 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYP------CDIWSVGCILVELCTG 265
                             V T+ Y APEV+               DI+++G +  E+   
Sbjct: 212 ------------------VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253

Query: 266 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM 325
            ++   HE+ +          P  + M K V        ++ R + P    S E+++ + 
Sbjct: 254 CSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV------CEQKLRPNIPNRWQSCEALRVMA 307

Query: 326 KL 327
           K+
Sbjct: 308 KI 309

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 74.8 bits (184), Expect = 3e-15
 Identities = 65/356 (18%), Positives = 111/356 (31%), Gaps = 104/356 (29%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD----- 100
           ++      G FG V +       E VA+KI     K       E+  L  + KH+     
Sbjct: 27  QLLEVKARGRFGCVWKAQLLN--EYVAVKIFPIQDKQSWQNEYEVYSLPGM-KHENILQF 83

Query: 101 -----KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 154
                +G +  V +           ++       SL DFL+ N       + +  IA  +
Sbjct: 84  IGAEKRGTSVDVDL----------WLITAFHEKGSLSDFLKAN---VVSWNELCHIAETM 130

Query: 155 LECIAFMHD----------LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 204
              +A++H+            + H D+K +NVLL                    ++    
Sbjct: 131 ARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL-------------------KNNLT-- 169

Query: 205 MPKSSAIKVIDFG-----STTYERPDQNYIVSTRHYRAPEVI-----LGLGWTYPCDIWS 254
                   + DFG            D +  V TR Y APEV+              D+++
Sbjct: 170 ------ACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYA 223

Query: 255 VGCILVELCTGEALFQTHENLEHLAMMERVLGPLP--QHMLKRVDRHAEKYVRRGRLDWP 312
           +G +L EL +           E++   E  +G  P  + M + V        ++ R    
Sbjct: 224 MGLVLWELASRCTAA-DGPVDEYMLPFEEEIGQHPSLEDMQEVVVH------KKKRPVLR 276

Query: 313 EGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 368
                 +  +    +  L   I +  DH               D   RL+A     
Sbjct: 277 ------DYWQKHAGMAMLCETIEECWDH---------------DAEARLSAGCVGE 311

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 73.9 bits (182), Expect = 4e-15
 Identities = 48/264 (18%), Positives = 82/264 (31%), Gaps = 77/264 (29%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD---- 100
            +   +G+G +G+V    W   + E VA+KI     +       E+     L +H+    
Sbjct: 11  TLLECVGKGRYGEVWRGSW---QGENVAVKIFSSRDEKSWFRETELYNTVML-RHENILG 66

Query: 101 ------KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 153
                    +   Q+           ++       SLYD+L+     +        I   
Sbjct: 67  FIASDMTSRHSSTQL----------WLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLS 113

Query: 154 LLECIAFMHDL--------CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 205
           +   +A +H           + H DLK +N+L+           K +             
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV-----------KKNGQ----------- 151

Query: 206 PKSSAIKVIDFG-------STTYERPDQNYIVSTRHYRAPEVILGLGWTYP------CDI 252
                  + D G       ST       N  V T+ Y APEV+               DI
Sbjct: 152 -----CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 206

Query: 253 WSVGCILVELCTGEALFQTHENLE 276
           W+ G +L E+          E+ +
Sbjct: 207 WAFGLVLWEVARRMVSNGIVEDYK 230

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 73.6 bits (181), Expect = 1e-14
 Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 25/153 (16%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA---MIEIEVLQQLAKHDKG 102
           K+   +G+G FG +    D    E V       +K           E++  Q+ AK ++ 
Sbjct: 38  KVGLPIGQGGFGCIYLA-DMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQI 96

Query: 103 GNRCVQIRN---------WF--------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPID 145
                  +                     YR    ++ ++ GS L      N  + F   
Sbjct: 97  QKWIRTRKLKYLGVPKYWGSGLHDKNGKSYR---FMIMDRFGSDLQKIYEANA-KRFSRK 152

Query: 146 LVREIARQLLECIAFMHDLCMIHTDLKPENVLL 178
            V +++ ++L+ + ++H+   +H D+K  N+LL
Sbjct: 153 TVLQLSLRILDILEYIHEHEYVHGDIKASNLLL 185

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 73.5 bits (181), Expect = 1e-14
 Identities = 69/338 (20%), Positives = 121/338 (35%), Gaps = 92/338 (27%)

Query: 52  GEGTFGQVL---ECWDRERKEMVAIKIVR-----GIKKYREAAMIEIEVLQQLAKHDKGG 103
           G G +G+V    +    +  ++ A+K+++        K  E    E +VL+ + +     
Sbjct: 63  GTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP--- 119

Query: 104 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
              V +   F     + ++ + + G  L+  L +     F    V+    +++  +  +H
Sbjct: 120 -FLVTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLH 176

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
            L +I+ D+K EN+LL S+ ++ + D+  S    K+              V D     Y+
Sbjct: 177 KLGIIYRDIKLENILLDSNGHVVLTDFGLS----KEF-------------VADETERAYD 219

Query: 223 RPDQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQT-HENLEHLA 279
                    T  Y AP+++ G   G     D WS+G ++ EL TG + F    E      
Sbjct: 220 ------FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE 273

Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
           +  R+L                    +    +P                       Q + 
Sbjct: 274 ISRRIL--------------------KSEPPYP-----------------------QEMS 290

Query: 340 HSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
             A D   L+Q LL  DP  RL      A E   H FF
Sbjct: 291 ALAKD---LIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 71.7 bits (176), Expect = 4e-14
 Identities = 65/361 (18%), Positives = 114/361 (31%), Gaps = 114/361 (31%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD---- 100
           ++  ++G+G +G+V    W   R E VA+K+    ++       EI     + +H+    
Sbjct: 40  QMVKQIGKGRYGEVWMGKW---RGEKVAVKVFFTTEEASWFRETEIYQTVLM-RHENILG 95

Query: 101 ------KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 153
                 KG     Q+           ++ +     SLYD+L+     +     + ++A  
Sbjct: 96  FIAADIKGTGSWTQL----------YLITDYHENGSLYDYLKST---TLDAKSMLKLAYS 142

Query: 154 LLECIAFMHDL--------CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 205
            +  +  +H           + H DLK +N+L+           K +             
Sbjct: 143 SVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV-----------KKNGT----------- 180

Query: 206 PKSSAIKVIDFG-------STTYERPDQNYIVSTRHYRAPEVILGLGWTYP------CDI 252
                  + D G        T       N  V T+ Y  PEV+               D+
Sbjct: 181 -----CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADM 235

Query: 253 WSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYV-----RRG 307
           +S G IL E+          E  +           LP H L   D   E        ++ 
Sbjct: 236 YSFGLILWEVARRCVSGGIVEEYQ-----------LPYHDLVPSDPSYEDMREIVCIKKL 284

Query: 308 RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 367
           R  +P   +S E       L ++  L+ +   H               +P  RLTA    
Sbjct: 285 RPSFPNRWSSDEC------LRQMGKLMTECWAH---------------NPASRLTALRVK 323

Query: 368 R 368
           +
Sbjct: 324 K 324

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 70.1 bits (172), Expect = 1e-13
 Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 49/234 (20%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRE---RKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHD 100
           K  S++G+G FG V  C +D        +VA+K ++     ++     EI++L+ L   D
Sbjct: 26  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSD 84

Query: 101 KGGNRCVQIRN--WFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
                 V+ R   +   R  + +V E    G  L DFL+++  R     L+   + Q+ +
Sbjct: 85  F----IVKYRGVSYGPGRQSLRLVMEYLPSG-CLRDFLQRHRARLDASRLL-LYSSQICK 138

Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + ++     +H DL   N+ LV SE                            +K+ DF
Sbjct: 139 GMEYLGSRRCVHRDLAARNI-LVESEAH--------------------------VKIADF 171

Query: 217 GSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT 264
           G       D++Y V     +      APE +    ++   D+WS G +L EL T
Sbjct: 172 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 68.9 bits (169), Expect = 3e-13
 Identities = 67/289 (23%), Positives = 109/289 (37%), Gaps = 65/289 (22%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRER---KEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKH 99
           K    +GEG FG+V  C +D E     E VA+K ++      +      EIE+L+ L  H
Sbjct: 24  KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YH 82

Query: 100 DK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIAR 152
           +      G   C +     D  N I ++ E    G SL ++L KN  +      + + A 
Sbjct: 83  ENIVKYKG--ICTE-----DGGNGIKLIMEFLPSG-SLKEYLPKNKNKINLKQQL-KYAV 133

Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+ + + ++     +H DL   NV LV SE+                           +K
Sbjct: 134 QICKGMDYLGSRQYVHRDLAARNV-LVESEHQ--------------------------VK 166

Query: 213 VIDFGSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCTGE 266
           + DFG T     D+ Y              APE ++   +    D+WS G  L EL T  
Sbjct: 167 IGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT-- 224

Query: 267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEG 314
             +   ++      ++ +     Q  + R+       ++ G RL  P  
Sbjct: 225 --YCDSDSSPMALFLKMIGPTHGQMTVTRL----VNTLKEGKRLPCPPN 267

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 68.6 bits (168), Expect = 7e-13
 Identities = 49/246 (19%), Positives = 97/246 (39%), Gaps = 42/246 (17%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK---- 101
            +  K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH      
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQL 281

Query: 102 -GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
            G   C +            I+ E    G+ L D+LR+ N +     ++  +A Q+   +
Sbjct: 282 LG--VCTR-------EPPFYIITEFMTYGN-LLDYLRECNRQEVSAVVLLYMATQISSAM 331

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            ++     IH +L   N L+  +  +KV D+  S       +Y         IK      
Sbjct: 332 EYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIK------ 384

Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH 277
                           + APE +    ++   D+W+ G +L E+ T G + +   +  + 
Sbjct: 385 ----------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 428

Query: 278 LAMMER 283
             ++E+
Sbjct: 429 YELLEK 434

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 66.5 bits (163), Expect = 1e-12
 Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 38/153 (24%)

Query: 121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
           +V E + G +L +++  +      +D       Q+L+ I   HD+ ++H D+KP+N+L  
Sbjct: 88  LVMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNIL-- 143

Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG------STTYERPDQNYIVSTR 233
                                    +  +  +K+ DFG       T+  +   N+++ T 
Sbjct: 144 -------------------------IDSNKTLKIFDFGIAKALSETSLTQT--NHVLGTV 176

Query: 234 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
            Y +PE   G       DI+S+G +L E+  GE
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 66.5 bits (163), Expect = 2e-12
 Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 36/153 (23%)

Query: 121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 179
           IV E + G +L D +              E+     + + F H   +IH D+KP N++  
Sbjct: 93  IVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIM-- 148

Query: 180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG------STTYERPDQNYIVSTR 233
                                    +  ++A+KV+DFG       +         ++ T 
Sbjct: 149 -------------------------ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183

Query: 234 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
            Y +PE   G       D++S+GC+L E+ TGE
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 66.5 bits (163), Expect = 2e-12
 Identities = 35/150 (23%), Positives = 51/150 (34%), Gaps = 37/150 (24%)

Query: 127 GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV 186
           G  L   LR+             I RQ+   +   H     H D+KPEN+L+        
Sbjct: 118 GVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV-------- 167

Query: 187 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG------STTYERPDQNYIVSTRHYRAPEV 240
                   +  D              ++DFG           +      V T +Y APE 
Sbjct: 168 --------SADD-----------FAYLVDFGIASATTDEKLTQL--GNTVGTLYYMAPER 206

Query: 241 ILGLGWTYPCDIWSVGCILVELCTGEALFQ 270
                 TY  DI+++ C+L E  TG   +Q
Sbjct: 207 FSESHATYRADIYALTCVLYECLTGSPPYQ 236

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 65.6 bits (160), Expect = 4e-12
 Identities = 65/349 (18%), Positives = 112/349 (32%), Gaps = 79/349 (22%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           K+   +G G +G V +       +  VA+K+     +        I  +  + +HD   N
Sbjct: 16  KLLELIGRGRYGAVYKGSL---DERPVAVKVFSFANRQNFINEKNIYRVPLM-EHD---N 68

Query: 105 --RCV--QIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
             R +    R   D R    +V E    GS L  +L  +   +        +A  +   +
Sbjct: 69  IARFIVGDERVTADGRMEYLLVMEYYPNGS-LXKYLSLH---TSDWVSSCRLAHSVTRGL 124

Query: 159 AFMHD---------LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 209
           A++H            + H DL   NVL+ +     + D+  S+    +         ++
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184

Query: 210 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-------GWTYPCDIWSVGCILVEL 262
           A                   V T  Y APEV+ G              D++++G I  E+
Sbjct: 185 A----------------ISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228

Query: 263 CTGEALFQTHENLEHLAM-MERVLGPLP--QHMLKRVDRHAEKYVRRGRLDWPEGAASRE 319
                     E++    M  +  +G  P  + M   V R       + R  +PE      
Sbjct: 229 FMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSR------EKQRPKFPEAWKENS 282

Query: 320 SIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 368
                + +  L+  I    D                D   RLTA+ A  
Sbjct: 283 -----LAVRSLKETIEDCWDQ---------------DAEARLTAQXAEE 311

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 65.0 bits (159), Expect = 5e-12
 Identities = 53/251 (21%), Positives = 99/251 (39%), Gaps = 56/251 (22%)

Query: 50  KMGEGTFGQVLE-CWDRERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++G G FG V +  +   +K++ VAIK+++    K   E  M E +++ QL  +      
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPY---- 71

Query: 106 CVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
            V++             + +V E    G  L+ FL          ++  E+  Q+   + 
Sbjct: 72  IVRL-----IGVCQAEALMLVMEMAGGGP-LHKFLVGKREEIPVSNVA-ELLHQVSMGMK 124

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++ +   +H DL   NVLLV+  Y K+                            DFG +
Sbjct: 125 YLEEKNFVHRDLAARNVLLVNRHYAKIS---------------------------DFGLS 157

Query: 220 TYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 272
                D +Y  +    +      APE I    ++   D+WS G  + E  + G+  ++  
Sbjct: 158 KALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217

Query: 273 ENLEHLAMMER 283
           +  E +A +E+
Sbjct: 218 KGPEVMAFIEQ 228

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 64.6 bits (158), Expect = 7e-12
 Identities = 51/261 (19%), Positives = 96/261 (36%), Gaps = 61/261 (23%)

Query: 46  KIHSKMGEGTFGQVLE-------CWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLA 97
             +  +G+GTF ++ +        + +  +  V +K++    + Y E+      ++ +L 
Sbjct: 11  IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL- 69

Query: 98  KHDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREI 150
            H       G   CV         +   +V E  K GS L  +L+KN      +  + E+
Sbjct: 70  SHKHLVLNYG--VCVC-------GDENILVQEFVKFGS-LDTYLKKNKNCINILWKL-EV 118

Query: 151 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 210
           A+QL   + F+ +  +IH ++  +N+LL+  E  K  +                      
Sbjct: 119 AKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGN-------------------PPF 159

Query: 211 IKVIDFGSTTYERPDQNYIVSTRHYR------APEVIL-GLGWTYPCDIWSVGCILVELC 263
           IK+ D G +         ++     +       PE I          D WS G  L E+C
Sbjct: 160 IKLSDPGIS---I----TVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEIC 212

Query: 264 T-GEALFQTHENLEHLAMMER 283
           + G+      ++   L   E 
Sbjct: 213 SGGDKPLSALDSQRKLQFYED 233

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 64.3 bits (157), Expect = 9e-12
 Identities = 67/289 (23%), Positives = 107/289 (37%), Gaps = 67/289 (23%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRE---RKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKH 99
           K    +GEG FG+V    +D       EMVA+K ++     ++R     EI++L+ L  H
Sbjct: 34  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YH 92

Query: 100 DK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIAR 152
           +      G   C            + +V E   LG SL D+L +++       L+   A+
Sbjct: 93  EHIIKYKG--CCED-----AGAASLQLVMEYVPLG-SLRDYLPRHSIG--LAQLL-LFAQ 141

Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+ E +A++H    IH DL   NV L+ ++ +                          +K
Sbjct: 142 QICEGMAYLHAQHYIHRDLAARNV-LLDNDRL--------------------------VK 174

Query: 213 VIDFGSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCTGE 266
           + DFG          Y              APE +    + Y  D+WS G  L EL T  
Sbjct: 175 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT-- 232

Query: 267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEG 314
                         +E +     Q  + R+     + + RG RL  P+ 
Sbjct: 233 --HCDSSQSPPTKFLELIGIAQGQMTVLRL----TELLERGERLPRPDK 275

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 63.4 bits (153), Expect = 2e-11
 Identities = 51/251 (20%), Positives = 78/251 (31%), Gaps = 62/251 (24%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVR---------GIKKYREAAMIEIEVLQQLAKHD 100
           K+GEG FG+V +         VAIKI+            +K  E  + EI + ++L+   
Sbjct: 27  KIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLS 84

Query: 101 KG------------GNRCVQ-------IRNWFDYRN-----------------HICIVFE 124
                            CVQ       ++ W  Y +                  I + FE
Sbjct: 85  GEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFE 144

Query: 125 KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI-HTDLKPENVLLVSSEY 183
             G  L     K +     +   + I  QL   +A         H DL   NVLL  +  
Sbjct: 145 FGGIDLEQMRTKLS----SLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSL 200

Query: 184 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG 243
            K       LH   +            + +ID+  +  ER               ++  G
Sbjct: 201 KK-------LHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDV--SMDEDLFTG 251

Query: 244 LGWTYPCDIWS 254
            G  Y  DI+ 
Sbjct: 252 DG-DYQFDIYR 261

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 64.1 bits (156), Expect = 2e-11
 Identities = 66/251 (26%), Positives = 104/251 (41%), Gaps = 54/251 (21%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V    W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 323

Query: 105 RCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
             VQ+     Y       I IV E    GS L DFL+    +   +  + ++A Q+   +
Sbjct: 324 -LVQL-----YAVVSEEPIYIVTEYMSKGS-LLDFLKGETGKYLRLPQLVDMAAQIASGM 376

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
           A++  +  +H DL+  N+ LV    +                           KV DFG 
Sbjct: 377 AYVERMNYVHRDLRAANI-LVGENLV--------------------------CKVADFGL 409

Query: 219 TTYERPDQNYIVSTRH-----YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 272
                 D  Y           + APE  L   +T   D+WS G +L EL T G   +   
Sbjct: 410 ARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468

Query: 273 ENLEHLAMMER 283
            N E L  +ER
Sbjct: 469 VNREVLDQVER 479

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 62.6 bits (153), Expect = 3e-11
 Identities = 51/251 (20%), Positives = 97/251 (38%), Gaps = 52/251 (20%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK---- 101
            +  K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH      
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQL 74

Query: 102 -GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
            G   C +            I+ E    G +L D+LR+ N +     ++  +A Q+   +
Sbjct: 75  LG--VCTR-------EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAM 124

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            ++     IH DL   N  LV   ++                          +KV DFG 
Sbjct: 125 EYLEKKNFIHRDLAARNC-LVGENHL--------------------------VKVADFGL 157

Query: 219 TTYERPDQNYIVSTRH-----YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 272
           +     D  Y           + APE +    ++   D+W+ G +L E+ T G + +   
Sbjct: 158 SRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216

Query: 273 ENLEHLAMMER 283
           +  +   ++E+
Sbjct: 217 DLSQVYELLEK 227

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 63.2 bits (154), Expect = 4e-11
 Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 44/246 (17%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++  K+G+G FG+V    W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 240

Query: 105 RCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
             VQ+     Y       I IV E    GS L DFL+    +   +  + ++A Q+   +
Sbjct: 241 -LVQL-----YAVVSEEPIYIVTEYMSKGS-LLDFLKGETGKYLRLPQLVDMAAQIASGM 293

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
           A++  +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK      
Sbjct: 294 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIK------ 346

Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH 277
                           + APE  L   +T   D+WS G +L EL T G   +    N E 
Sbjct: 347 ----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390

Query: 278 LAMMER 283
           L  +ER
Sbjct: 391 LDQVER 396

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 63.2 bits (154), Expect = 4e-11
 Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 44/246 (17%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           K+  K+G G FG+V    +++  K  VA+K ++      EA + E  V++ L +HD    
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEANVMKTL-QHD---- 243

Query: 105 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
           + V++      +  I I+ E +   SL DFL+ +     P+  + + + Q+ E +AF+  
Sbjct: 244 KLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              IH DL+  N+ LVS+  +                           K+ DFG      
Sbjct: 303 RNYIHRDLRAANI-LVSASLV--------------------------CKIADFGLARVIE 335

Query: 224 PDQNYIVSTRH-----YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH 277
            D  Y           + APE I    +T   D+WS G +L+E+ T G   +    N E 
Sbjct: 336 -DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 394

Query: 278 LAMMER 283
           +  +ER
Sbjct: 395 IRALER 400

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 62.3 bits (152), Expect = 4e-11
 Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 58/252 (23%)

Query: 50  KMGEGTFGQVLE-CWDRERKEM-VAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++G G FG V +  +  ++    VA+KI++        ++  + E  V+QQL  +     
Sbjct: 24  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPY--- 79

Query: 105 RCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
             V++               +V E  +LG  L  +L++N  R      + E+  Q+   +
Sbjct: 80  -IVRM-----IGICEAESWMLVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGM 130

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            ++ +   +H DL   NVLLV+  Y K+                            DFG 
Sbjct: 131 KYLEESNFVHRDLAARNVLLVTQHYAKIS---------------------------DFGL 163

Query: 219 TTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-GEALFQT 271
           +   R D+NY  +  H +      APE I    ++   D+WS G ++ E  + G+  ++ 
Sbjct: 164 SKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223

Query: 272 HENLEHLAMMER 283
            +  E  AM+E+
Sbjct: 224 MKGSEVTAMLEK 235

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 61.1 bits (149), Expect = 8e-11
 Identities = 55/265 (20%), Positives = 100/265 (37%), Gaps = 59/265 (22%)

Query: 46  KIHSKMGEGTFGQVLE-CWDRERKEM--VAIKIVR----GIKKYREAAMIEIEVLQQLAK 98
           ++  K+G+G+FG V    WD    +   VA+K ++       +  +  + E+  +  L  
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-D 79

Query: 99  HDKGGNRCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIAR 152
           H       +++     Y       + +V E   LGS L D LRK+        L    A 
Sbjct: 80  HRN----LIRL-----YGVVLTPPMKMVTELAPLGS-LLDRLRKHQGHFLLGTLS-RYAV 128

Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           Q+ E + ++     IH DL   N+LL + + +K+                          
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG------------------------- 163

Query: 213 VIDFGSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-G 265
             DFG       + ++ V   H +      APE +    +++  D W  G  L E+ T G
Sbjct: 164 --DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG 221

Query: 266 EALFQTHENLEHLAMMERVLGPLPQ 290
           +  +      + L  +++    LP+
Sbjct: 222 QEPWIGLNGSQILHKIDKEGERLPR 246

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 61.1 bits (149), Expect = 9e-11
 Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 54/251 (21%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
           K+  ++G G FG+V    ++   K  VA+K ++      +A + E  +++QL +H +   
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFLAEANLMKQL-QHQR--- 69

Query: 105 RCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
             V++     Y    +  I I+ E  + GS L DFL+  +     I+ + ++A Q+ E +
Sbjct: 70  -LVRL-----YAVVTQEPIYIITEYMENGS-LVDFLKTPSGIKLTINKLLDMAAQIAEGM 122

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
           AF+ +   IH DL+  N+ LVS                               K+ DFG 
Sbjct: 123 AFIEERNYIHRDLRAANI-LVSDTLS--------------------------CKIADFGL 155

Query: 219 TTYERPDQNYIVSTRH---YR--APEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 272
                 D  Y          +  APE I    +T   D+WS G +L E+ T G   +   
Sbjct: 156 ARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214

Query: 273 ENLEHLAMMER 283
            N E +  +ER
Sbjct: 215 TNPEVIQNLER 225

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 62.3 bits (151), Expect = 1e-10
 Identities = 52/251 (20%), Positives = 99/251 (39%), Gaps = 56/251 (22%)

Query: 50  KMGEGTFGQVLE-CWDRERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++G G FG V +  +   +K++ VAIK+++    K   E  M E +++ QL  +      
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPY---- 397

Query: 106 CVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
            V++             + +V E    G  L+ FL          ++  E+  Q+   + 
Sbjct: 398 IVRL-----IGVCQAEALMLVMEMAGGGP-LHKFLVGKREEIPVSNVA-ELLHQVSMGMK 450

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++ +   +H +L   NVLLV+  Y K+                            DFG +
Sbjct: 451 YLEEKNFVHRNLAARNVLLVNRHYAKIS---------------------------DFGLS 483

Query: 220 TYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 272
                D +Y  +    +      APE I    ++   D+WS G  + E  + G+  ++  
Sbjct: 484 KALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543

Query: 273 ENLEHLAMMER 283
           +  E +A +E+
Sbjct: 544 KGPEVMAFIEQ 554

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 60.4 bits (147), Expect = 2e-10
 Identities = 57/257 (22%), Positives = 95/257 (36%), Gaps = 58/257 (22%)

Query: 46  KIHSKMGEGTFGQVLE-CW--DRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHD 100
            I   +G G  G+V         +R   VAIK ++    ++ R   + E  ++ Q   H 
Sbjct: 52  HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-DHP 110

Query: 101 K-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQ 153
                 G     +            IV E  + GS L  FLR ++ +   + LV  + R 
Sbjct: 111 NIIRLEG--VVTR-------GRLAMIVTEYMENGS-LDTFLRTHDGQFTIMQLV-GMLRG 159

Query: 154 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 213
           +   + ++ DL  +H DL   NV LV S  +                           KV
Sbjct: 160 VGAGMRYLSDLGYVHRDLAARNV-LVDSNLV--------------------------CKV 192

Query: 214 IDFGSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-GE 266
            DFG +     D +   +T   +      APE I    ++   D+WS G ++ E+   GE
Sbjct: 193 SDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE 252

Query: 267 ALFQTHENLEHLAMMER 283
             +    N + ++ +E 
Sbjct: 253 RPYWNMTNRDVISSVEE 269

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 60.5 bits (147), Expect = 2e-10
 Identities = 57/252 (22%), Positives = 100/252 (39%), Gaps = 48/252 (19%)

Query: 46  KIHSKMGEGTFGQVLE-CW--DRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHD 100
            I   +G G FG+V         +++  VAIK ++    +K R   + E  ++ Q   H 
Sbjct: 48  SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHP 106

Query: 101 KGGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
                 +++         + IV E  + GS L  FLRK++ +   I LV  + R +   +
Sbjct: 107 N----IIRLEGVVTKSKPVMIVTEYMENGS-LDSFLRKHDAQFTVIQLV-GMLRGIASGM 160

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            ++ D+  +H DL   N+ L++S  +                           KV DFG 
Sbjct: 161 KYLSDMGYVHRDLAARNI-LINSNLV--------------------------CKVSDFGL 193

Query: 219 TTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-GEALFQT 271
                 D     +TR  +      +PE I    +T   D+WS G +L E+ + GE  +  
Sbjct: 194 GRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253

Query: 272 HENLEHLAMMER 283
             N + +  ++ 
Sbjct: 254 MSNQDVIKAVDE 265

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 59.5 bits (145), Expect = 3e-10
 Identities = 63/247 (25%), Positives = 99/247 (40%), Gaps = 46/247 (18%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
               ++G G FG V    W  + K  VAIK +R      E  + E EV+ +L  H K   
Sbjct: 11  TFVQEIGSGQFGLVHLGYWLNKDK--VAIKTIREGAMSEEDFIEEAEVMMKL-SHPK--- 64

Query: 105 RCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             VQ+      +  IC+V E  + G  L D+LR          L+  +   + E +A++ 
Sbjct: 65  -LVQLYGVCLEQAPICLVTEFMEHGC-LSDYLRTQRGLFAAETLL-GMCLDVCEGMAYLE 121

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
           + C+IH DL   N  LV    +                          IKV DFG T + 
Sbjct: 122 EACVIHRDLAARNC-LVGENQV--------------------------IKVSDFGMTRFV 154

Query: 223 RPDQNYIVSTRH-----YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 276
             D  Y  ST       + +PEV     ++   D+WS G ++ E+ + G+  ++   N E
Sbjct: 155 -LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 213

Query: 277 HLAMMER 283
            +  +  
Sbjct: 214 VVEDIST 220

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 59.1 bits (144), Expect = 3e-10
 Identities = 56/247 (22%), Positives = 95/247 (38%), Gaps = 46/247 (18%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
            +  ++G G FG V    W  +    VA+K+++      +    E + + +L  H K   
Sbjct: 11  TLLKELGSGQFGVVKLGKWKGQYD--VAVKMIKEGSMSEDEFFQEAQTMMKL-SHPK--- 64

Query: 105 RCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             V+          I IV E    G  L ++LR +     P  L+ E+   + E +AF+ 
Sbjct: 65  -LVKFYGVCSKEYPIYIVTEYISNGC-LLNYLRSHGKGLEPSQLL-EMCYDVCEGMAFLE 121

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
               IH DL   N  LV  +                            +KV DFG T Y 
Sbjct: 122 SHQFIHRDLAARNC-LVDRDLC--------------------------VKVSDFGMTRYV 154

Query: 223 RPDQNYIVSTRH-----YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 276
             D  Y+ S        + APEV     ++   D+W+ G ++ E+ + G+  +  + N E
Sbjct: 155 L-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE 213

Query: 277 HLAMMER 283
            +  + +
Sbjct: 214 VVLKVSQ 220

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 59.6 bits (145), Expect = 5e-10
 Identities = 53/253 (20%), Positives = 91/253 (35%), Gaps = 54/253 (21%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGG 103
            +  ++G G FG+V     R    +VA+K  R       +   + E  +L+Q   H    
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHPN-- 173

Query: 104 NRCVQIRNWFDY-----RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
              V++           +  I IV E + G     FLR    R     L+ ++       
Sbjct: 174 --IVRL-----IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLL-QMVGDAAAG 225

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + ++   C IH DL   N  LV+ + +                          +K+ DFG
Sbjct: 226 MEYLESKCCIHRDLAARNC-LVTEKNV--------------------------LKISDFG 258

Query: 218 STTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-GEALFQ 270
            +  E  D  Y  S    +      APE +    ++   D+WS G +L E  + G + + 
Sbjct: 259 MSREEA-DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYP 317

Query: 271 THENLEHLAMMER 283
              N +    +E+
Sbjct: 318 NLSNQQTREFVEK 330

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 58.4 bits (142), Expect = 9e-10
 Identities = 49/255 (19%), Positives = 101/255 (39%), Gaps = 55/255 (21%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRERKEM---VAIKIVRG--IKKYREAAMIEIEVLQQLAKH 99
           K    +G G FG V +  W  E +++   VAIK +R     K  +  + E  V+  +  +
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DN 76

Query: 100 DKGGNRCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQ 153
                   ++           + + ++ +    G  L D++R++        L+     Q
Sbjct: 77  PH----VCRL-----LGICLTSTVQLITQLMPFGC-LLDYVREHKDNIGSQYLL-NWCVQ 125

Query: 154 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK----RMPKSS 209
           + + + ++ D  ++H DL   NVL+ + +++K+ D+  +     +   +     ++P   
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 182

Query: 210 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL 268
            IK                      + A E IL   +T+  D+WS G  + EL T G   
Sbjct: 183 -IK----------------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219

Query: 269 FQTHENLEHLAMMER 283
           +      E  +++E+
Sbjct: 220 YDGIPASEISSILEK 234

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 57.6 bits (140), Expect = 1e-09
 Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 46/247 (18%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 104
               ++G G FG V    W  +    VAIK+++      +  + E +V+  L  H+K   
Sbjct: 27  TFLKELGTGQFGVVKYGKWRGQYD--VAIKMIKEGSMSEDEFIEEAKVMMNL-SHEK--- 80

Query: 105 RCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
             VQ+      +  I I+ E    G  L ++LR+  +R     L+ E+ + + E + ++ 
Sbjct: 81  -LVQLYGVCTKQRPIFIITEYMANGC-LLNYLREMRHRFQTQQLL-EMCKDVCEAMEYLE 137

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
               +H DL   N  LV+ + +                          +KV DFG + Y 
Sbjct: 138 SKQFLHRDLAARNC-LVNDQGV--------------------------VKVSDFGLSRYV 170

Query: 223 RPDQNYIVSTRH-----YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 276
             D+ Y  S        +  PEV++   ++   DIW+ G ++ E+ + G+  ++   N E
Sbjct: 171 LDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 229

Query: 277 HLAMMER 283
               + +
Sbjct: 230 TAEHIAQ 236

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 54/258 (20%), Positives = 96/258 (37%), Gaps = 59/258 (22%)

Query: 46  KIHSKMGEGTFGQVLE-CW---DRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKH 99
                +G G FG+V +        +++  VAIK ++    +K R   + E  ++ Q   H
Sbjct: 47  TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SH 105

Query: 100 DK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIAR 152
                  G     +          + I+ E  + G+ L  FLR+ +     + LV  + R
Sbjct: 106 HNIIRLEG--VISK-------YKPMMIITEYMENGA-LDKFLREKDGEFSVLQLV-GMLR 154

Query: 153 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
            +   + ++ ++  +H DL   N+ LV+S  +                           K
Sbjct: 155 GIAAGMKYLANMNYVHRDLAARNI-LVNSNLV--------------------------CK 187

Query: 213 VIDFGSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-G 265
           V DFG +     D     +T   +      APE I    +T   D+WS G ++ E+ T G
Sbjct: 188 VSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYG 247

Query: 266 EALFQTHENLEHLAMMER 283
           E  +    N E +  +  
Sbjct: 248 ERPYWELSNHEVMKAIND 265

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 55.4 bits (134), Expect = 9e-09
 Identities = 53/255 (20%), Positives = 97/255 (38%), Gaps = 55/255 (21%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRERKEM---VAIKIVRGI--KKYREAAMIEIEVLQQLAKH 99
           +    +G G FG V +  W  E + +   V IK++     ++  +A    +  +  L  H
Sbjct: 16  RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-DH 74

Query: 100 DKGGNRCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQ 153
                  V++           + + +V +   LGS L D +R++     P  L+     Q
Sbjct: 75  AH----IVRL-----LGLCPGSSLQLVTQYLPLGS-LLDHVRQHRGALGPQLLL-NWGVQ 123

Query: 154 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK----RMPKSS 209
           + + + ++ +  M+H +L   NVLL S   ++V D+  +   P D         + P   
Sbjct: 124 IAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP--- 180

Query: 210 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL 268
            IK                      + A E I    +T+  D+WS G  + EL T G   
Sbjct: 181 -IK----------------------WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217

Query: 269 FQTHENLEHLAMMER 283
           +      E   ++E+
Sbjct: 218 YAGLRLAEVPDLLEK 232

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 59/250 (23%), Positives = 98/250 (39%), Gaps = 47/250 (18%)

Query: 46  KIHSKMGEGTFGQVLE-CWDRERKE--MVAIKIVRG--IKKYREAAMIEIEVLQQLAKHD 100
           ++   +GEG FG V +  +         VAIK  +       RE  + E   ++Q   H 
Sbjct: 18  ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHP 76

Query: 101 KGGNRCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQL 154
                 V++           N + I+ E   LG  L  FL+   Y      L+   A QL
Sbjct: 77  H----IVKL-----IGVITENPVWIIMELCTLGE-LRSFLQVRKYSLDLASLI-LYAYQL 125

Query: 155 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
              +A++     +H D+   NVL+ S++ +K+ D+  S +  +DS+Y+K       IK  
Sbjct: 126 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK-- 182

Query: 215 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE 273
                               + APE I    +T   D+W  G  + E+   G   FQ  +
Sbjct: 183 --------------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 222

Query: 274 NLEHLAMMER 283
           N + +  +E 
Sbjct: 223 NNDVIGRIEN 232

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 49/255 (19%), Positives = 101/255 (39%), Gaps = 55/255 (21%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRERKEM---VAIKIVRG--IKKYREAAMIEIEVLQQLAKH 99
           K    +G G FG V +  W  E +++   VAIK +R     K  +  + E  V+  +  +
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DN 76

Query: 100 DKGGNRCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQ 153
                   ++           + + ++ +    G  L D++R++        L+     Q
Sbjct: 77  PH----VCRL-----LGICLTSTVQLITQLMPFGC-LLDYVREHKDNIGSQYLL-NWCVQ 125

Query: 154 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK----RMPKSS 209
           + + + ++ D  ++H DL   NVL+ + +++K+ D+  +     +   +     ++P   
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 182

Query: 210 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL 268
            IK                      + A E IL   +T+  D+WS G  + EL T G   
Sbjct: 183 -IK----------------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219

Query: 269 FQTHENLEHLAMMER 283
           +      E  +++E+
Sbjct: 220 YDGIPASEISSILEK 234

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 52.6 bits (127), Expect = 6e-08
 Identities = 52/256 (20%), Positives = 97/256 (37%), Gaps = 59/256 (23%)

Query: 46  KIHSKMGEGTFGQVLE-CW--DRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHD 100
            ++  +GEG FG+V E  +   +  K  VA+K  +       +E  M E  +++ L  H 
Sbjct: 15  VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHP 73

Query: 101 KGGNRCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQL 154
                 V++               I+ E    G  L  +L +N      + LV   + Q+
Sbjct: 74  H----IVKL-----IGIIEEEPTWIIMELYPYGE-LGHYLERNKNSLKVLTLV-LYSLQI 122

Query: 155 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
            + +A++  +  +H D+   N+ LV+S                             +K+ 
Sbjct: 123 CKAMAYLESINCVHRDIAVRNI-LVASPEC--------------------------VKLG 155

Query: 215 DFGSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-GEA 267
           DFG + Y   +  Y       R      +PE I    +T   D+W     + E+ + G+ 
Sbjct: 156 DFGLSRYIEDEDYY--KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQ 213

Query: 268 LFQTHENLEHLAMMER 283
            F   EN + + ++E+
Sbjct: 214 PFFWLENKDVIGVLEK 229

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 53.1 bits (128), Expect = 7e-08
 Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 20/150 (13%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK---- 101
           K+   +G+G FG V+    R  K  VA+K ++      +A + E  V+ QL +H      
Sbjct: 196 KLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKNDAT-AQAFLAEASVMTQL-RHSNLVQL 251

Query: 102 -GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
            G    V+       +  + IV E    GS L D+LR         D + + +  + E +
Sbjct: 252 LG--VIVE------EKGGLYIVTEYMAKGS-LVDYLRSRGRSVLGGDCLLKFSLDVCEAM 302

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPD 188
            ++     +H DL   NVL+      KV D
Sbjct: 303 EYLEGNNFVHRDLAARNVLVSEDNVAKVSD 332

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 52.5 bits (126), Expect = 1e-07
 Identities = 58/251 (23%), Positives = 97/251 (38%), Gaps = 49/251 (19%)

Query: 46  KIHSKMGEGTFGQVLE-CW--DRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHD 100
           ++   +GEG FG V +  +         VAIK  +       RE  + E   ++Q   H 
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHP 451

Query: 101 K-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQ 153
                 G     +        N + I+ E   LG  L  FL+   +      L+   A Q
Sbjct: 452 HIVKLIG--VITE--------NPVWIIMELCTLGE-LRSFLQVRKFSLDLASLI-LYAYQ 499

Query: 154 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 213
           L   +A++     +H D+   NVL+ S++ +K+ D+  S +  +DS+Y+K       IK 
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK- 557

Query: 214 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 272
                                + APE I    +T   D+W  G  + E+   G   FQ  
Sbjct: 558 ---------------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596

Query: 273 ENLEHLAMMER 283
           +N + +  +E 
Sbjct: 597 KNNDVIGRIEN 607

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 60/250 (24%), Positives = 88/250 (35%), Gaps = 72/250 (28%)

Query: 46  KIHSKMGEGTFGQVLEC-WDRERKEM-VAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 101
           K    +GEG FGQVL+    ++   M  AIK ++    K        E+EVL +L  H  
Sbjct: 28  KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 87

Query: 102 -----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIA--- 151
                G   C         R ++ +  E    G +L DFLRK+             +   
Sbjct: 88  IINLLG--ACEH-------RGYLYLAIEYAPHG-NLLDFLRKSRVLETDPAFAIANSTAS 137

Query: 152 ----RQLLEC---IA----FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS 200
               +QLL     +A    ++     IH DL   N+ LV   Y+                
Sbjct: 138 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNI-LVGENYV---------------- 180

Query: 201 YFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWS 254
                      K+ DFG +   R  Q   V     R      A E +    +T   D+WS
Sbjct: 181 ----------AKIADFGLS---R-GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS 226

Query: 255 VGCILVELCT 264
            G +L E+ +
Sbjct: 227 YGVLLWEIVS 236

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 29/248 (11%), Positives = 51/248 (20%), Gaps = 65/248 (26%)

Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHDKG 102
           +    G     Q  +  D      VA+  V           +  +     L ++      
Sbjct: 35  LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRID-KP-- 91

Query: 103 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
                ++ +    R    +V E + G SL +          P+  +R   + L       
Sbjct: 92  --GVARVLDVVHTRAGGLVVAEWIRGGSLQEVADT---SPSPVGAIR-AMQSLAAAADAA 145

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +  +   P  V +                                + +        
Sbjct: 146 HRAGVALSIDHPSRVRVSI---------------------------DGDVVLAYPA---- 174

Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
                                        DI  +G  L  L               LA  
Sbjct: 175 -------------TMPDA-------NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA 214

Query: 282 ERVLGPLP 289
           ER     P
Sbjct: 215 ERDTAGQP 222

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 49.9 bits (120), Expect = 4e-07
 Identities = 54/251 (21%), Positives = 93/251 (37%), Gaps = 58/251 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK---- 101
           K+   +G+G FG V+    R  K  VA+K ++      +A + E  V+ QL +H      
Sbjct: 24  KLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKN-DATAQAFLAEASVMTQL-RHSNLVQL 79

Query: 102 -GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
            G    +      + +  + IV E    GS L D+LR         D + + +  + E +
Sbjct: 80  LG---VI-----VEEKGGLYIVTEYMAKGS-LVDYLRSRGRSVLGGDCLLKFSLDVCEAM 130

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            ++     +H DL   NV LVS + +                           KV DFG 
Sbjct: 131 EYLEGNNFVHRDLAARNV-LVSEDNV--------------------------AKVSDFGL 163

Query: 219 TTYERPDQNYIVSTRH---YR--APEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 272
           T                   +  APE +    ++   D+WS G +L E+ + G   +   
Sbjct: 164 TKEA-----SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 218

Query: 273 ENLEHLAMMER 283
              + +  +E+
Sbjct: 219 PLKDVVPRVEK 229

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 53/254 (20%), Positives = 78/254 (30%), Gaps = 72/254 (28%)

Query: 46  KIHSKMGEGTFGQVLEC-----WDRERKEMVAIKIVRGIKKYREAA--MIEIEVLQQLAK 98
                +G G FG+V+E         +    VA+K+++      E    M E++VL  L  
Sbjct: 26  SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85

Query: 99  HDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIA 151
           H       G   C              ++ E    G  L +FLR+             I 
Sbjct: 86  HMNIVNLLG--ACTI-------GGPTLVITEYCCYG-DLLNFLRRKRDSFICSKTSPAIM 135

Query: 152 RQLLECIAFMHDLCM----------------IHTDLKPENVLLVSSEYIKVPDYKSSLHT 195
                 +     L                  IH DL   N+ L++   I           
Sbjct: 136 EDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI-LLTHGRI----------- 183

Query: 196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR-----APEVILGLGWTYPC 250
                           K+ DFG     + D NY+V           APE I    +T+  
Sbjct: 184 ---------------TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES 228

Query: 251 DIWSVGCILVELCT 264
           D+WS G  L EL +
Sbjct: 229 DVWSYGIFLWELFS 242

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 61/300 (20%), Positives = 106/300 (35%), Gaps = 86/300 (28%)

Query: 46  KIHSKMGEGTFGQVLEC-----WDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAK 98
           +    +G G FG+V+E         +    VA+K+++       +EA M E++++  L +
Sbjct: 49  QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108

Query: 99  HDKGGN---RCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKN--NYRSFPIDLVREIA 151
           H+   N    C            + ++ E    G  L +FLR+      + P   +    
Sbjct: 109 HENIVNLLGACTH-------GGPVLVITEYCCYG-DLLNFLRRKSRVLETDPAFAIANST 160

Query: 152 RQLLECIAFMHDLC--M--------IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 201
               + + F   +   M        IH D+   NV L+++ ++                 
Sbjct: 161 ASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV-LLTNGHV----------------- 202

Query: 202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVG 256
                     K+ DFG       D NYIV         + APE I    +T   D+WS G
Sbjct: 203 ---------AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253

Query: 257 CILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEGA 315
            +L E+ +             L +      P P  +   V+    K V+ G ++  P  A
Sbjct: 254 ILLWEIFS-------------LGLN-----PYPGIL---VNSKFYKLVKDGYQMAQPAFA 292

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* Length = 258

 Score = 46.2 bits (109), Expect = 6e-06
 Identities = 27/164 (16%), Positives = 58/164 (35%), Gaps = 12/164 (7%)

Query: 43  FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKG 102
            A KI+ ++    F ++ E       E   ++ +   +K       E   L++  +    
Sbjct: 77  MAVKIY-RIETSEFDKMDEY--LYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA--- 130

Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
           G    Q    + Y  ++ ++       L         R      V  I   ++E +  ++
Sbjct: 131 GVSVPQP---YTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLY 187

Query: 163 DLC-MIHTDLKPENVLLVSS-EYIKVPDYKSSLHTPKDSSYFKR 204
               ++H DL   N++ +    +I +    +  H P   SY +R
Sbjct: 188 QEAELVHADLSEYNIMYIDKVYFIDMGQAVTLRH-PMAESYLER 230

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 46.5 bits (111), Expect = 7e-06
 Identities = 50/252 (19%), Positives = 85/252 (33%), Gaps = 69/252 (27%)

Query: 46  KIHSKMGEGTFGQVLEC-----WDRERKEMVAIKIVRGIKKYREAA--MIEIEVLQQLAK 98
           K+   +G G FGQV+E              VA+K+++    + E    M E+++L  +  
Sbjct: 30  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89

Query: 99  HDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKN----NYRSFPIDLV 147
           H       G                + ++ E  K G +L  +LR             + +
Sbjct: 90  HLNVVNLLG---AC-----TKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPEDL 140

Query: 148 REIARQLLECIAFMHDLC--M--------IHTDLKPENVLLVSSEYIKVPDYKSSLHTPK 197
            +    L   I +   +   M        IH DL   N+ L+S + +             
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI-LLSEKNV------------- 186

Query: 198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR-----APEVILGLGWTYPCDI 252
                        +K+ DFG       D +Y+            APE I    +T   D+
Sbjct: 187 -------------VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 233

Query: 253 WSVGCILVELCT 264
           WS G +L E+ +
Sbjct: 234 WSFGVLLWEIFS 245

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 2e-05
 Identities = 56/432 (12%), Positives = 114/432 (26%), Gaps = 120/432 (27%)

Query: 1   MRMRGSSGILMVDMY-----ILLTMALRNRVLMCNMFNLITYIVFSAFADKIHSKMGE-G 54
           + +R +  +L+  +       +      +  + C M   I ++            +    
Sbjct: 145 LELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWL-----------NLKNCN 193

Query: 55  TFGQVLE-----CWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 109
           +   VLE      +  +            IK    +   E+  L +   +      C+ +
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY----ENCLLV 249

Query: 110 -RN-W-------FDYRNHIC-IVFEKLGSSLYDFLRKNNYRSFPID-----LVREIARQL 154
             N         F+     C I+       + DFL         +D     L  +  + L
Sbjct: 250 LLNVQNAKAWNAFNLS---CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306

Query: 155 LECIAFMHDLCMIHTDLKPE----NVLLVS--SEYIKVPDYKSSLHTPKDSSYFKRMPKS 208
           L        L     DL  E    N   +S  +E I+                +K +   
Sbjct: 307 LLKY-----LDCRPQDLPREVLTTNPRRLSIIAESIR--------DGLATWDNWKHVNCD 353

Query: 209 SAIKVIDFGSTTYERPDQNYIVSTRHYRA----------PEVILGLGWTYPCDIWSVGCI 258
               +I+  S     P +      + +            P ++L L W        V  +
Sbjct: 354 KLTTIIE-SSLNVLEPAEYR----KMFDRLSVFPPSAHIPTILLSLIWFDVIKS-DVMVV 407

Query: 259 LVELCTGEALFQTHEN----LEHLAMMERVLGPLPQHMLKRVDRHA---EKYVRRGRLDW 311
           + +L     + +  +     +  + +  +        +      H    + Y      D 
Sbjct: 408 VNKLHKYSLVEKQPKESTISIPSIYLELK------VKLENEYALHRSIVDHYNIPKTFDS 461

Query: 312 PEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
            +           +  P L      H+ H      HL       +  +R+      R  F
Sbjct: 462 DD-----------LIPPYLDQYFYSHIGH------HLKNI----EHPERM---TLFRMVF 497

Query: 372 ----FTRDHLRR 379
               F    +R 
Sbjct: 498 LDFRFLEQKIRH 509

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 44.9 bits (106), Expect = 2e-05
 Identities = 58/339 (17%), Positives = 105/339 (30%), Gaps = 91/339 (26%)

Query: 46  KIHSKMGEGTFGQVLEC-----WDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAK 98
           K+   +G G FGQV+E              VA+K+++         A M E+++L  +  
Sbjct: 25  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 84

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
           H    N    +         + ++ E     +L  +LR    R+  +    + AR     
Sbjct: 85  HL---NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK--RNEFVPYKTKGARFR--- 136

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSSA----- 210
                 +  I  DLK     + SS+      +  + SL   ++    + + K        
Sbjct: 137 -QGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHL 195

Query: 211 ------------------------------------IKVIDFGSTTYERPDQNYIVSTRH 234
                                               +K+ DFG       D +Y+     
Sbjct: 196 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255

Query: 235 YR-----APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLP 289
                  APE I    +T   D+WS G +L E+ +                    LG  P
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--------------------LGASP 295

Query: 290 -QHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSVMK 326
              +  ++D    + ++ G R+  P+       +   M 
Sbjct: 296 YPGV--KIDEEFCRRLKEGTRMRAPDYT--TPEMYQTML 330

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 23/155 (14%)

Query: 46  KIHSKMGEGTFGQVLEC---WDRERKEMVAIKIVRGIKKYREAA--MIEIEVLQQLAKHD 100
             +  +G G FG V       +  +K   A+K +  I    E +  + E  +++    H 
Sbjct: 28  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHP 86

Query: 101 K-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQ 153
                 G                  +V    K G  L +F+R   +     DL+     Q
Sbjct: 87  NVLSLLG---IC-----LRSEGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLIG-FGLQ 136

Query: 154 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD 188
           + + + ++     +H DL   N +L     +KV D
Sbjct: 137 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 171

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 44.4 bits (105), Expect = 4e-05
 Identities = 45/251 (17%), Positives = 84/251 (33%), Gaps = 58/251 (23%)

Query: 46  KIHSKMGEGTFGQVLE--CWDRERKEM-VAIKIVRGIKKYREAA--MIEIEVLQQLAKHD 100
             +  +G G FG V      D + K++  A+K +  I    E +  + E  +++    H 
Sbjct: 92  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHP 150

Query: 101 K-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQ 153
                 G                  +V    K G  L +F+R   +     DL+     Q
Sbjct: 151 NVLSLLG---IC-----LRSEGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLIG-FGLQ 200

Query: 154 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 213
           + + + F+     +H DL   N  ++  ++                           +KV
Sbjct: 201 VAKGMKFLASKKFVHRDLAARNC-MLDEKFT--------------------------VKV 233

Query: 214 IDFG-STTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-G 265
            DFG +      + + + +    +      A E +    +T   D+WS G +L EL T G
Sbjct: 234 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 293

Query: 266 EALFQTHENLE 276
              +      +
Sbjct: 294 APPYPDVNTFD 304

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 44.1 bits (105), Expect = 4e-05
 Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 37/121 (30%)

Query: 150 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 209
            A  +     F+H+   IH D+K  N+LL                   D ++     K S
Sbjct: 142 AANGI----NFLHENHHIHRDIKSANILL-------------------DEAF---TAKIS 175

Query: 210 AIKVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT 264
                DFG           ++++R      Y APE + G   T   DI+S G +L+E+ T
Sbjct: 176 -----DFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIIT 229

Query: 265 G 265
           G
Sbjct: 230 G 230

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 43.9 bits (104), Expect = 6e-05
 Identities = 50/254 (19%), Positives = 92/254 (36%), Gaps = 72/254 (28%)

Query: 46  KIHSKMGEGTFGQVLEC-------WDRERKEMVAIKIVRGIKKYREAA--MIEIEVLQQL 96
            +   +GEG FGQV+             R   VA+K+++     ++ +  + E+E+++ +
Sbjct: 72  VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 131

Query: 97  AKHDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKN----NYRSFPID 145
            KH       G   C Q          + ++ E    G +L ++L+         S+   
Sbjct: 132 GKHKNIINLLG--ACTQ-------DGPLYVIVEYASKG-NLREYLQARRPPGLEYSYNPS 181

Query: 146 LVREIARQLLECIAFMHDLC--M--------IHTDLKPENVLLVSSEYIKVPDYKSSLHT 195
              E      + ++  + +   M        IH DL   NV LV+ + +           
Sbjct: 182 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV-LVTEDNV----------- 229

Query: 196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPC 250
                          +K+ DFG          Y  +T       + APE +    +T+  
Sbjct: 230 ---------------MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 274

Query: 251 DIWSVGCILVELCT 264
           D+WS G +L E+ T
Sbjct: 275 DVWSFGVLLWEIFT 288

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 57/257 (22%), Positives = 90/257 (35%), Gaps = 83/257 (32%)

Query: 46  KIHSKMGEGTFGQVLEC-----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKH 99
            +  ++GEG FG+V           + K +VA+K ++   +  R+    E E+L  L +H
Sbjct: 44  VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-QH 102

Query: 100 DK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIAR 152
                  G   C +          + +VFE  + G  L  FLR +   +  +    ++A 
Sbjct: 103 QHIVRFFG--VCTE-------GRPLLMVFEYMRHG-DLNRFLRSHGPDAKLLAGGEDVAP 152

Query: 153 QLLECIAFMH-------------DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS 199
             L     +               L  +H DL   N  LV    +               
Sbjct: 153 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNC-LVGQGLV--------------- 196

Query: 200 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR------------APEVILGLGWT 247
                      +K+ DFG +   R     I ST +YR             PE IL   +T
Sbjct: 197 -----------VKIGDFGMS---R----DIYSTDYYRVGGRTMLPIRWMPPESILYRKFT 238

Query: 248 YPCDIWSVGCILVELCT 264
              D+WS G +L E+ T
Sbjct: 239 TESDVWSFGVVLWEIFT 255

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 44/255 (17%), Positives = 83/255 (32%), Gaps = 60/255 (23%)

Query: 50  KMGEGTFGQVLEC---WDRERKEMVAIKIVRGIKKYREAA--MIEIEVLQQLAKHDK--- 101
            +G+G FG V         + +   AIK +  I + ++    + E  +++ L  H     
Sbjct: 28  VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHPNVLA 86

Query: 102 --GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
             G    +             ++      G  L  F+R         DL+     Q+   
Sbjct: 87  LIG---IM-----LPPEGLPHVLLPYMCHGD-LLQFIRSPQRNPTVKDLI-SFGLQVARG 136

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + ++ +   +H DL   N  ++   +                           +KV DFG
Sbjct: 137 MEYLAEQKFVHRDLAARNC-MLDESFT--------------------------VKVADFG 169

Query: 218 STTYERPDQNYIVSTRHYR--------APEVILGLGWTYPCDIWSVGCILVELCT-GEAL 268
                  D+ Y    +H          A E +    +T   D+WS G +L EL T G   
Sbjct: 170 LARDIL-DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP 228

Query: 269 FQTHENLEHLAMMER 283
           ++  +  +    + +
Sbjct: 229 YRHIDPFDLTHFLAQ 243

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 51/256 (19%), Positives = 92/256 (35%), Gaps = 76/256 (29%)

Query: 46  KIHSKMGEGTFGQVLEC-------WDRERKEMVAIKIVRGIKKYREAA--MIEIEVLQQL 96
            +   +GEG FGQV+            +    VA+K+++     ++ +  + E+E+++ +
Sbjct: 38  TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97

Query: 97  AKHDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVRE 149
            KH       G   C Q          + ++ E    G +L ++LR    R   ++   +
Sbjct: 98  GKHKNIINLLG--ACTQ-------DGPLYVIVEYASKG-NLREYLRAR--RPPGMEYSYD 145

Query: 150 IARQLLECIAFMHDLCM----------------IHTDLKPENVLLVSSEYIKVPDYKSSL 193
           I R   E + F   +                  IH DL   NV LV+   +         
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV-LVTENNV--------- 195

Query: 194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTY 248
                            +K+ DFG          Y  +T       + APE +    +T+
Sbjct: 196 -----------------MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238

Query: 249 PCDIWSVGCILVELCT 264
             D+WS G ++ E+ T
Sbjct: 239 QSDVWSFGVLMWEIFT 254

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 40.7 bits (96), Expect = 5e-04
 Identities = 55/259 (21%), Positives = 89/259 (34%), Gaps = 77/259 (29%)

Query: 46  KIHSKMGEGTFGQVLEC-----WDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAK 98
           +    +G G FG+V+               VA+K+++       REA M E++++ QL  
Sbjct: 48  EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 107

Query: 99  HDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIA 151
           H+      G   C            I ++FE    G  L ++LR    +    ++  E  
Sbjct: 108 HENIVNLLGA--CTL-------SGPIYLIFEYCCYG-DLLNYLRSKREKFSEDEIEYENQ 157

Query: 152 RQLLECIAF----MHDLCM-----------------IHTDLKPENVLLVSSEYIKVPDYK 190
           ++L E          DL                   +H DL   NV LV+   +      
Sbjct: 158 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNV-LVTHGKV------ 210

Query: 191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR-----APEVILGLG 245
                               +K+ DFG       D NY+V           APE +    
Sbjct: 211 --------------------VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI 250

Query: 246 WTYPCDIWSVGCILVELCT 264
           +T   D+WS G +L E+ +
Sbjct: 251 YTIKSDVWSYGILLWEIFS 269

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 51/254 (20%), Positives = 92/254 (36%), Gaps = 72/254 (28%)

Query: 46  KIHSKMGEGTFGQVLEC-------WDRERKEMVAIKIVRGIKKYREAA--MIEIEVLQQL 96
            +   +GEG FGQV+            +    VA+K+++     ++ +  + E+E+++ +
Sbjct: 84  TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 143

Query: 97  AKHDKGGN---RCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIA 151
            KH    N    C Q          + ++ E    G +L ++LR    R   ++   +I 
Sbjct: 144 GKHKNIINLLGACTQ-------DGPLYVIVEYASKG-NLREYLRAR--RPPGMEYSYDIN 193

Query: 152 RQLLECIAFMHDLCM----------------IHTDLKPENVLLVSSEYIKVPDYKSSLHT 195
           R   E + F   +                  IH DL   NV LV+   +           
Sbjct: 194 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV-LVTENNV----------- 241

Query: 196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPC 250
                          +K+ DFG          Y  +T       + APE +    +T+  
Sbjct: 242 ---------------MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 286

Query: 251 DIWSVGCILVELCT 264
           D+WS G ++ E+ T
Sbjct: 287 DVWSFGVLMWEIFT 300

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 57/259 (22%), Positives = 93/259 (35%), Gaps = 86/259 (33%)

Query: 46  KIHSKMGEGTFGQVLEC-----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKH 99
            +  ++GEG FG+V           + K +VA+K ++      R+    E E+L  L +H
Sbjct: 18  VLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL-QH 76

Query: 100 DK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSF---------- 142
           +      G   C          + + +VFE  K G  L  FLR +   +           
Sbjct: 77  EHIVKFYG--VCGD-------GDPLIMVFEYMKHG-DLNKFLRAHGPDAMILVDGQPRQA 126

Query: 143 -----PIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK 197
                   ++  IA Q+   + ++     +H DL   N  LV +  +             
Sbjct: 127 KGELGLSQML-HIASQIASGMVYLASQHFVHRDLATRNC-LVGANLL------------- 171

Query: 198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR------------APEVILGLG 245
                        +K+ DFG +   R     + ST +YR             PE I+   
Sbjct: 172 -------------VKIGDFGMS---R----DVYSTDYYRVGGHTMLPIRWMPPESIMYRK 211

Query: 246 WTYPCDIWSVGCILVELCT 264
           +T   D+WS G IL E+ T
Sbjct: 212 FTTESDVWSFGVILWEIFT 230

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	379
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.96
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.92
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.89
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.83
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.68
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.25
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.03
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.92
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.88
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.61
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.37
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.35
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.02
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.02
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.87
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.7
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.45
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.42
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.18
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.16
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.15
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.07
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	96.95
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	96.94
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	96.43
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.14
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	96.1
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.02
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	95.72
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	95.43
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	94.09
3mes_A	424	Choline kinase; malaria, structural genomics, stru	91.85
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	89.7

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=4.8e-60  Score=439.49  Aligned_cols=253  Identities=26%  Similarity=0.434  Sum_probs=218.6

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ...|++.++||+|+||+||+|+++.+|+.||||+++.. ......+.+|+.++..+     .|+||+++++++.+++.+|
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-----~HpnIV~l~~~~~~~~~~~  147 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-----QHENVVEMYNSYLVGDELW  147 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHC-----CCTTBCCEEEEEEETTEEE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEECCEEE
Confidence            35689999999999999999999999999999999743 33455678899999998     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      |||||| ||+|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||+                     
T Consensus       148 ivmEy~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---------------------  203 (346)
T 4fih_A          148 VVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---------------------  203 (346)
T ss_dssp             EEECCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---------------------
T ss_pred             EEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE---------------------
Confidence            999999 99999999874   49999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            +.++.+||+|||+|+.....   ....+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+..+
T Consensus       204 ------~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~  277 (346)
T 4fih_A          204 ------THDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK  277 (346)
T ss_dssp             ------CTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             ------CCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH
Confidence                  55667888888888754333   245689999999999999999999999999999999999999999888777


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.....+...                                              .+...++++++||.+||+.|
T Consensus       278 ~~~~i~~~~~~~~~----------------------------------------------~~~~~s~~~~dli~~~L~~d  311 (346)
T 4fih_A          278 AMKMIRDNLPPRLK----------------------------------------------NLHKVSPSLKGFLDRLLVRD  311 (346)
T ss_dssp             HHHHHHHSSCCCCS----------------------------------------------CGGGSCHHHHHHHHHHSCSS
T ss_pred             HHHHHHcCCCCCCC----------------------------------------------ccccCCHHHHHHHHHHcCCC
Confidence            66655543222111                                              11246789999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~  375 (379)
                      |++||||+|+|+||||++.
T Consensus       312 P~~R~ta~e~l~Hp~~~~~  330 (346)
T 4fih_A          312 PAQRATAAELLKHPFLAKA  330 (346)
T ss_dssp             TTTSCCHHHHTTCGGGGGC
T ss_pred             hhHCcCHHHHhcCHhhcCC
Confidence            9999999999999999864

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=3.3e-60  Score=434.31  Aligned_cols=252  Identities=26%  Similarity=0.402  Sum_probs=218.7

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      ...|++.+.||+|+||+||+|+++.+|+.||+|+++..    ......+.+|+.++..+     +||||+++++++++++
T Consensus        31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~l~~~~~~~~  105 (311)
T 4aw0_A           31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-----DHPFFVKLYFTFQDDE  105 (311)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSS
T ss_pred             ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEEeCC
Confidence            34699999999999999999999999999999999742    23345677899998887     7899999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      .+|+||||| ||+|.+++.+.+  .+++..+..++.||+.||+|||++||+||||||+|||+                  
T Consensus       106 ~~yivmEy~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl------------------  165 (311)
T 4aw0_A          106 KLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL------------------  165 (311)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE------------------
T ss_pred             EEEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEE------------------
Confidence            999999999 999999998765  69999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                               +.++.+||+|||+|+.....     ..+.+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+
T Consensus       166 ---------~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~  236 (311)
T 4aw0_A          166 ---------NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA  236 (311)
T ss_dssp             ---------CTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ---------cCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                     56677888888888754332     2346899999999999999999999999999999999999999998


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .+..+....+.+....+|                                                 +..++++++||.+
T Consensus       237 ~~~~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~dli~~  267 (311)
T 4aw0_A          237 GNEGLIFAKIIKLEYDFP-------------------------------------------------EKFFPKARDLVEK  267 (311)
T ss_dssp             SSHHHHHHHHHHTCCCCC-------------------------------------------------TTCCHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCCCC-------------------------------------------------cccCHHHHHHHHH
Confidence            887777666554332222                                                 1357789999999


Q ss_pred             ccccCCCCCcCHHH------HhcCCCCCCCC
Q 017021          352 LLRYDPTDRLTARE------ALRHPFFTRDH  376 (379)
Q Consensus       352 ~L~~dP~~Rpta~e------~l~hp~f~~~~  376 (379)
                      ||+.||++|||++|      +++||||++.+
T Consensus       268 lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~id  298 (311)
T 4aw0_A          268 LLVLDATKRLGCEEMEGYGPLKAHPFFESVT  298 (311)
T ss_dssp             HSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             HccCCHhHCcChHHHcCCHHHHCCCCcCCCC
Confidence            99999999999988      58999999864

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=7.9e-60  Score=425.96  Aligned_cols=249  Identities=24%  Similarity=0.422  Sum_probs=203.9

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.+.||+|+||+||+|+++.+|+.||+|+++..    ......+.+|+.+++.+     .||||+++++++++++.+
T Consensus        14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~~~~~~~~~~~~   88 (275)
T 3hyh_A           14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-----RHPHIIKLYDVIKSKDEI   88 (275)
T ss_dssp             CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-----CCTTBCCEEEEEECSSEE
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-----CCCCCCeEEEEEEECCEE
Confidence            589999999999999999999999999999999642    23345678899999998     789999999999999999


Q ss_pred             EEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       120 ~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      |+||||++|+|.+.+.+.+  .+++..+..++.||+.||+|||++||+||||||+|||+                     
T Consensus        89 ~ivmEy~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl---------------------  145 (275)
T 3hyh_A           89 IMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---------------------  145 (275)
T ss_dssp             EEEEECCCEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE---------------------
T ss_pred             EEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEE---------------------
Confidence            9999999999999998865  69999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCC-CCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            +.++.+||+|||+|+......  ...+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+..+
T Consensus       146 ------~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~  219 (275)
T 3hyh_A          146 ------DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV  219 (275)
T ss_dssp             ------CTTCCEEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ------CCCCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH
Confidence                  556678888888886543332  34689999999999998886 589999999999999999999999877666


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.+...+.|                                                 ...++++++||.+||+.|
T Consensus       220 ~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~~L~~d  250 (275)
T 3hyh_A          220 LFKNISNGVYTLP-------------------------------------------------KFLSPGAAGLIKRMLIVN  250 (275)
T ss_dssp             HHHHHHHTCCCCC-------------------------------------------------TTSCHHHHHHHHHHSCSS
T ss_pred             HHHHHHcCCCCCC-------------------------------------------------CCCCHHHHHHHHHHccCC
Confidence            6555544322222                                                 135678999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~  375 (379)
                      |++|||++|+++||||+.+
T Consensus       251 P~~R~s~~eil~hpw~k~~  269 (275)
T 3hyh_A          251 PLNRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             GGGSCCHHHHHHCHHHHTT
T ss_pred             hhHCcCHHHHHcCcccccC
Confidence            9999999999999999754

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=4.2e-60  Score=440.56  Aligned_cols=252  Identities=25%  Similarity=0.373  Sum_probs=213.3

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|+++++||+|+||+||+|+++.+|+.||||++...   ......+.+|+.+++++     .|+||+++++++++++.+|
T Consensus        25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-----~HpnIV~~~~~~~~~~~~y   99 (350)
T 4b9d_A           25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-----KHPNIVQYRESFEENGSLY   99 (350)
T ss_dssp             CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETTEEE
T ss_pred             ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHC-----CCCCCCcEEEEEEECCEEE
Confidence            689999999999999999999999999999999743   33456778899999998     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||| ||+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||+                     
T Consensus       100 iVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---------------------  158 (350)
T 4b9d_A          100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---------------------  158 (350)
T ss_dssp             EEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEE---------------------
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---------------------
Confidence            999999 9999999987665568999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            +.++.+||+|||+|+......   ...+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+..+
T Consensus       159 ------~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~  232 (350)
T 4b9d_A          159 ------TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN  232 (350)
T ss_dssp             ------CTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             ------CCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH
Confidence                  566778889999887654332   23579999999999999999999999999999999999999999888777


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.+...+.                                                .+..+++++++||.+||+.|
T Consensus       233 ~~~~i~~~~~~~------------------------------------------------~~~~~s~~~~~li~~~L~~d  264 (350)
T 4b9d_A          233 LVLKIISGSFPP------------------------------------------------VSLHYSYDLRSLVSQLFKRN  264 (350)
T ss_dssp             HHHHHHHTCCCC------------------------------------------------CCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHcCCCCC------------------------------------------------CCccCCHHHHHHHHHHccCC
Confidence            666554432111                                                01246788999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~  375 (379)
                      |++|||++|+|+||||++.
T Consensus       265 P~~R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          265 PRDRPSVNSILEKGFIAKR  283 (350)
T ss_dssp             GGGSCCHHHHHTSHHHHTT
T ss_pred             hhHCcCHHHHhcCHHhhcC
Confidence            9999999999999999764

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.3e-58  Score=440.15  Aligned_cols=253  Identities=26%  Similarity=0.434  Sum_probs=218.7

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ...|++.++||+|+||.||+|+++.+|+.||||++... ......+.+|+.++..+     .|+||+++++++.+++.+|
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-----~HpnIV~l~~~~~~~~~~~  224 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-----QHENVVEMYNSYLVGDELW  224 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHC-----CCTTBCCEEEEEEETTEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhC-----CCCCCCceEEEEEECCEEE
Confidence            35689999999999999999999999999999999743 33455678899999998     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      |||||| ||+|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||+                     
T Consensus       225 iVmEy~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl---------------------  280 (423)
T 4fie_A          225 VVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---------------------  280 (423)
T ss_dssp             EEEECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEE---------------------
T ss_pred             EEEeCCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE---------------------
Confidence            999999 99999999765   49999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            +.++.+||+|||+|......   ....+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+..+
T Consensus       281 ------~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~  354 (423)
T 4fie_A          281 ------THDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK  354 (423)
T ss_dssp             ------CTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             ------cCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH
Confidence                  55667888888888754333   245689999999999999999999999999999999999999999888777


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.....+...                                              .+...++++++||.+||+.|
T Consensus       355 ~~~~i~~~~~~~~~----------------------------------------------~~~~~s~~~~dli~~~L~~d  388 (423)
T 4fie_A          355 AMKMIRDNLPPRLK----------------------------------------------NLHKVSPSLKGFLDRLLVRD  388 (423)
T ss_dssp             HHHHHHHSCCCCCS----------------------------------------------CTTSSCHHHHHHHHHHSCSS
T ss_pred             HHHHHHcCCCCCCc----------------------------------------------ccccCCHHHHHHHHHHcCCC
Confidence            66655543221110                                              11246789999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~  375 (379)
                      |++||||+|+|+||||++.
T Consensus       389 P~~R~ta~ell~Hp~~~~~  407 (423)
T 4fie_A          389 PAQRATAAELLKHPFLAKA  407 (423)
T ss_dssp             TTTSCCHHHHTTCGGGGGC
T ss_pred             hhHCcCHHHHhcCHHhcCC
Confidence            9999999999999999864

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=4.7e-58  Score=417.82  Aligned_cols=256  Identities=23%  Similarity=0.399  Sum_probs=207.8

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      ...+..|++.++||+|+||+||+|.++.+++.||+|++...   ......+.+|+.++.++     .||||+++++++++
T Consensus        22 ~~~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-----~HpnIV~~~~~~~~   96 (290)
T 3fpq_A           22 SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-----QHPNIVRFYDSWES   96 (290)
T ss_dssp             CTTSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEEE
T ss_pred             CCCCceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEee
Confidence            33445568888999999999999999999999999999642   23345678899999988     78999999999875


Q ss_pred             ----cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecccccccCC
Q 017021          116 ----RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPD  188 (379)
Q Consensus       116 ----~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--iiH~dlkp~Nili~~~~~~~~~~  188 (379)
                          ++.+|+||||| ||+|.+++.+..  .+++..+..++.||+.||+|||++|  |+||||||+|||++         
T Consensus        97 ~~~~~~~~~lvmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~---------  165 (290)
T 3fpq_A           97 TVKGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT---------  165 (290)
T ss_dssp             EETTEEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEES---------
T ss_pred             ccCCCcEEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEE---------
Confidence                45789999999 999999998765  6999999999999999999999998  99999999999993         


Q ss_pred             CccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCC
Q 017021          189 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                                       ..++.+||+|||+|+...... ...+||+.|+|||++.+ .|+.++|||||||++|+|++|+.
T Consensus       166 -----------------~~~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~  227 (290)
T 3fpq_A          166 -----------------GPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEY  227 (290)
T ss_dssp             -----------------STTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             -----------------CCCCCEEEEeCcCCEeCCCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCC
Confidence                             135678888888887543332 34689999999998865 69999999999999999999999


Q ss_pred             CCCCCchHHHH-HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          268 LFQTHENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       268 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      ||...+..... ..+..  +..|.                                             ..+...+++++
T Consensus       228 Pf~~~~~~~~~~~~i~~--~~~~~---------------------------------------------~~~~~~~~~~~  260 (290)
T 3fpq_A          228 PYSECQNAAQIYRRVTS--GVKPA---------------------------------------------SFDKVAIPEVK  260 (290)
T ss_dssp             TTTTCSSHHHHHHHHTT--TCCCG---------------------------------------------GGGGCCCHHHH
T ss_pred             CCCCCCcHHHHHHHHHc--CCCCC---------------------------------------------CCCccCCHHHH
Confidence            99765443322 21111  11111                                             01224567899


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +||.+||+.||++|||++|+|+||||++.
T Consensus       261 ~li~~~L~~dP~~R~s~~e~l~Hp~~~~~  289 (290)
T 3fpq_A          261 EIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             HHHHHHccCChhHCcCHHHHhcCccccCC
Confidence            99999999999999999999999999874

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.1e-58  Score=424.12  Aligned_cols=251  Identities=27%  Similarity=0.440  Sum_probs=209.7

Q ss_pred             hhhhhhhccccccceeEEEEEec---CCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           43 FADKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      ..|++.+.||+|+||+||+|++.   .+++.||+|+++..   ......+.+|+.++.++     +||||++++++++++
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~l~~~~~~~   98 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-----NHPFIVKLHYAFQTE   98 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCC-----CCTTEECEEEEEEET
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHC-----CCCCCCeEEEEEEEC
Confidence            46999999999999999999874   56889999999742   22234566788877776     789999999999999


Q ss_pred             ceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          117 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       117 ~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      +.+|+||||| ||+|.+++.+.+  .+++..+..++.||+.||+|||++||+||||||+|||+                 
T Consensus        99 ~~~~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl-----------------  159 (304)
T 3ubd_A           99 GKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL-----------------  159 (304)
T ss_dssp             TEEEEEECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE-----------------
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEE-----------------
Confidence            9999999999 999999998865  69999999999999999999999999999999999999                 


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                +.++.+||+|||+|+....   .....+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.
T Consensus       160 ----------~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~  229 (304)
T 3ubd_A          160 ----------DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK  229 (304)
T ss_dssp             ----------CTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ----------cCCCCEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc
Confidence                      5667788899998865322   224568999999999999999999999999999999999999999988


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+....+.+...+.|                                                 ...++++++||.+|
T Consensus       230 ~~~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~~  260 (304)
T 3ubd_A          230 DRKETMTMILKAKLGMP-------------------------------------------------QFLSPEAQSLLRML  260 (304)
T ss_dssp             SHHHHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCC-------------------------------------------------CcCCHHHHHHHHHH
Confidence            87777666654332222                                                 13677899999999


Q ss_pred             cccCCCCCcC-----HHHHhcCCCCCCCC
Q 017021          353 LRYDPTDRLT-----AREALRHPFFTRDH  376 (379)
Q Consensus       353 L~~dP~~Rpt-----a~e~l~hp~f~~~~  376 (379)
                      |+.||++|||     ++|+++||||++.+
T Consensus       261 L~~dP~~R~ta~~~~~~eil~Hp~f~~id  289 (304)
T 3ubd_A          261 FKRNPANRLGAGPDGVEEIKRHSFFSTID  289 (304)
T ss_dssp             TCSSGGGSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             cccCHHHCCCCCcCCHHHHHcCccccCCC
Confidence            9999999998     47999999999754

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=8.7e-57  Score=427.82  Aligned_cols=279  Identities=27%  Similarity=0.459  Sum_probs=223.6

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee-----
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-----  115 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~-----  115 (379)
                      .|+++++||+|+||+||+|+++.+|+.||||+++..   ......+.+|+.+++.+     .|+||+++++++..     
T Consensus        55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~l~~~~~~~~~~~  129 (398)
T 4b99_A           55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-----KHDNIIAIKDILRPTVPYG  129 (398)
T ss_dssp             SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCEEEECCCSSCTT
T ss_pred             CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhc-----CCCCcceEeeeeecccccc
Confidence            589999999999999999999999999999999643   23345677899999998     78999999998753     


Q ss_pred             -cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 -RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 -~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                       .+.+|+|||||+|+|.+++.+.+  .+++..+..++.||+.||.|||++||+||||||+|||+                
T Consensus       130 ~~~~~~ivmE~~~g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~----------------  191 (398)
T 4b99_A          130 EFKSVYVVLDLMESDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV----------------  191 (398)
T ss_dssp             TCCCEEEEEECCSEEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----------------
T ss_pred             cCCEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCcccccc----------------
Confidence             46799999999888999997754  79999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCC-------CCCcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERP-------DQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~-------~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~  266 (379)
                                 +.++.+||+|||+|+....       .....+||+.|+|||++.+. .++.++||||+||++|+|++|+
T Consensus       192 -----------~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~  260 (398)
T 4b99_A          192 -----------NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR  260 (398)
T ss_dssp             -----------CTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTS
T ss_pred             -----------CCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCC
Confidence                       4556677777777754322       12346899999999998875 4689999999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhh-hhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                      +||.+.+..+....+.+..+.++...+....... ..+... ......                  ..........++++
T Consensus       261 ~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~-~~~~~~------------------~~~~~~~~~~s~~~  321 (398)
T 4b99_A          261 QLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQS-LPPRQP------------------VPWETVYPGADRQA  321 (398)
T ss_dssp             CSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHS-SCCCCC------------------CCHHHHSTTCCHHH
T ss_pred             CCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhc-CCCcCC------------------CCHHHhCCCCCHHH
Confidence            9999999999999999999988876654432211 111111 000000                  00112234567899


Q ss_pred             HHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          346 THLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      .|||.+||++||++||||+|+|+||||++-
T Consensus       322 ~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  351 (398)
T 4b99_A          322 LSLLGRMLRFEPSARISAAAALRHPFLAKY  351 (398)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred             HHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence            999999999999999999999999999863

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=2.1e-57  Score=420.59  Aligned_cols=250  Identities=25%  Similarity=0.333  Sum_probs=207.4

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      ..|++.++||+|+||.||+|+++.+|+.||||+++...    ...+|+.+++.+     .||||+++++++++++.+|||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~----~~~~E~~il~~l-----~HpnIV~l~~~~~~~~~~~iv  128 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV----FRVEELVACAGL-----SSPRIVPLYGAVREGPWVNIF  128 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT----CCTHHHHTTTTC-----CCTTBCCEEEEEEETTEEEEE
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH----hHHHHHHHHHhC-----CCCCCCcEEEEEEECCEEEEE
Confidence            34778889999999999999999999999999997532    224588888777     789999999999999999999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      |||| ||+|.+++.+.+  .+++..+..++.||+.||+|||++||+||||||+|||++                      
T Consensus       129 mEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~----------------------  184 (336)
T 4g3f_A          129 MELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS----------------------  184 (336)
T ss_dssp             ECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEC----------------------
T ss_pred             EeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEe----------------------
Confidence            9999 999999998765  699999999999999999999999999999999999994                      


Q ss_pred             cccCCCCC-CeEEeecCcccccCCCC--------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          202 FKRMPKSS-AIKVIDFGSTTYERPDQ--------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       202 ~~~~~~~~-~~~l~Dfg~~~~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                           .++ .+||+|||+|+......        ...+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.
T Consensus       185 -----~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~  259 (336)
T 4g3f_A          185 -----SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY  259 (336)
T ss_dssp             -----TTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred             -----CCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence                 333 47888888886543321        2357999999999999999999999999999999999999999876


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+....+.....++                                              ...++.+++.+.+||.+|
T Consensus       260 ~~~~~~~~i~~~~~~~----------------------------------------------~~~~~~~s~~~~~li~~~  293 (336)
T 4g3f_A          260 FRGPLCLKIASEPPPI----------------------------------------------REIPPSCAPLTAQAIQEG  293 (336)
T ss_dssp             CCSCCHHHHHHSCCGG----------------------------------------------GGSCTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCc----------------------------------------------hhcCccCCHHHHHHHHHH
Confidence            5544443333311100                                              012235778999999999


Q ss_pred             cccCCCCCcCHHHH-------------hcCCCCCCCC
Q 017021          353 LRYDPTDRLTAREA-------------LRHPFFTRDH  376 (379)
Q Consensus       353 L~~dP~~Rpta~e~-------------l~hp~f~~~~  376 (379)
                      |+.||++||||+|+             ++|||+.+-+
T Consensus       294 L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~  330 (336)
T 4g3f_A          294 LRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYK  330 (336)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCC
T ss_pred             ccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCC
Confidence            99999999999997             6799998754

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2.2e-55  Score=413.77  Aligned_cols=309  Identities=24%  Similarity=0.354  Sum_probs=215.9

Q ss_pred             hhhhhhhccccccceeEEEEEec---CCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      -.|++.++||+|+||+||+|+++   .+++.||+|++... .......+|++++..+    .+|+||+++++++++.+++
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~-~~~~~~~~E~~~l~~~----~~h~nIv~l~~~~~~~~~~   95 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT-SHPIRIAAELQCLTVA----GGQDNVMGVKYCFRKNDHV   95 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT-SCHHHHHHHHHHHHHT----CSBTTBCCCSEEEEETTEE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc-cCHHHHHHHHHHHHHh----cCCCCCceEEEEEEECCEE
Confidence            45899999999999999999875   46889999998743 3355677888888876    3578999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecc-cccccCCCccCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSS-EYIKVPDYKSSLHTPK  197 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~-~~~~~~~~~~~~~~~~  197 (379)
                      |+||||+ +++|.+++.     .+++..++.++.||+.||+|||++||+||||||+|||++.+ +.+|++|||++.....
T Consensus        96 ~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~  170 (361)
T 4f9c_A           96 VIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD  170 (361)
T ss_dssp             EEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred             EEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence            9999999 899999983     48999999999999999999999999999999999999765 6777777777654322


Q ss_pred             CCcccccCCCCCCeEEeecCccc---------------ccCCCCCcccccCCccchhhhhCC-CCCCccchHhHHHHHHH
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTT---------------YERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVE  261 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~---------------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~  261 (379)
                      ...           .+.+|+.+.               .........+||+.|+|||++.+. .|+.++||||+||++|+
T Consensus       171 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~e  239 (361)
T 4f9c_A          171 TKI-----------ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLS  239 (361)
T ss_dssp             CSC-----------GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHH
T ss_pred             ccc-----------cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHH
Confidence            111           001111000               001111335799999999999875 48899999999999999


Q ss_pred             HHhCCCCCCC-CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhh----------ccchhh
Q 017021          262 LCTGEALFQT-HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSV----------MKLPRL  330 (379)
Q Consensus       262 l~~g~~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~  330 (379)
                      |++|+.||.. .++.+....+.+..|..+...+...  .........  ..+.. ..+......          ......
T Consensus       240 ll~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~--~~~~~~~~~--~~p~~-~~~~~~~~~~~~~~~~p~~~~~~~~  314 (361)
T 4f9c_A          240 LLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKT--FGKSILCSK--EVPAQ-DLRKLCERLRGMDSSTPKLTSDIQG  314 (361)
T ss_dssp             HHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHH--TTEEEEESS--CCCCC-CHHHHHHHHC---------------
T ss_pred             HHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhh--ccccccccc--cCcch-hhhHHHHhhcccccccccccccccc
Confidence            9999999854 4567777888887775433222111  000000000  01100 000000000          000001


Q ss_pred             HHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       331 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      .......+...++++.|||++||++||++||||+|+|+||||++.++
T Consensus       315 ~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~l  361 (361)
T 4f9c_A          315 HATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMSL  361 (361)
T ss_dssp             -------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC--
T ss_pred             ccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCCC
Confidence            11122335567889999999999999999999999999999998654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.3e-54  Score=396.47  Aligned_cols=265  Identities=24%  Similarity=0.287  Sum_probs=189.3

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc----
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN----  117 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~----  117 (379)
                      .|++++.||+|+||.||+|+++.+|+.||+|+++..  ......+.+|+.+++++     .||||+++++++.+.+    
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l-----~HpnIV~~~~~~~~~~~~~~   80 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-----EHPGIVRYFNAWLEKNTTEK   80 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEEEC----
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEEecCcccc
Confidence            488999999999999999999999999999999643  23345677899998887     7899999999987543    


Q ss_pred             --------eEEEEEeCC-CCCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccC
Q 017021          118 --------HICIVFEKL-GSSLYDFLRKNNY-RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  187 (379)
Q Consensus       118 --------~~~lv~e~~-~~sL~~~l~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~  187 (379)
                              ++|+||||| +++|.+++..... ...+...++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus        81 ~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~  160 (299)
T 4g31_A           81 LQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVG  160 (299)
T ss_dssp             ------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             ccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEc
Confidence                    479999999 9999999987541 124566788999999999999999999999999999999555544444


Q ss_pred             CCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCC
Q 017021          188 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                      |||++.....+.....        ...    ...........+||+.|+|||++.+..|+.++|||||||++|+|++   
T Consensus       161 DFGla~~~~~~~~~~~--------~~~----~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---  225 (299)
T 4g31_A          161 DFGLVTAMDQDEEEQT--------VLT----PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---  225 (299)
T ss_dssp             CCCCC--------------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---
T ss_pred             cCccceecCCCccccc--------ccc----ccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---
Confidence            4444433221110000        000    0000001123479999999999999999999999999999999995   


Q ss_pred             CCCCCchHHHHHHHHHHc-CCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          268 LFQTHENLEHLAMMERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      ||.+..  +....+.... ...|+.                                              ....++.+.
T Consensus       226 Pf~~~~--~~~~~~~~~~~~~~p~~----------------------------------------------~~~~~~~~~  257 (299)
T 4g31_A          226 PFSTQM--ERVRTLTDVRNLKFPPL----------------------------------------------FTQKYPCEY  257 (299)
T ss_dssp             CCSSHH--HHHHHHHHHHTTCCCHH----------------------------------------------HHHHCHHHH
T ss_pred             CCCCcc--HHHHHHHHHhcCCCCCC----------------------------------------------CcccCHHHH
Confidence            775422  2222222221 222211                                              112345678


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +||.+||+.||++|||+.|+++||||++-+
T Consensus       258 ~li~~~L~~dP~~Rps~~eil~h~~~~~~~  287 (299)
T 4g31_A          258 VMVQDMLSPSPMERPEAINIIENAVFEDLD  287 (299)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHTSGGGCCC-
T ss_pred             HHHHHHcCCChhHCcCHHHHhcCHhhCCCC
Confidence            999999999999999999999999998754

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2e-53  Score=423.38  Aligned_cols=258  Identities=28%  Similarity=0.434  Sum_probs=222.5

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ..|+|.+.||+|+||.||+|+++.+|+.||+|++... ......+.+|+.++..+     .|+||+++++++++++.+|+
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l-----~hpnIv~l~~~~~~~~~~~i  231 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-----RHPTLVNLHDAFEDDNEMVM  231 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHT-----CCTTBCCEEEEEECSSEEEE
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhC-----CCCCCCeEEEEEEECCEEEE
Confidence            3689999999999999999999999999999998743 33456677899999998     78999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      ||||| ||+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||+..                    
T Consensus       232 v~E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~--------------------  290 (573)
T 3uto_A          232 IYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT--------------------  290 (573)
T ss_dssp             EEECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS--------------------
T ss_pred             EEeecCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccC--------------------
Confidence            99999 999999986543 26999999999999999999999999999999999999943                    


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  278 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~  278 (379)
                           +..+.+||+|||+|.......  ...+||+.|+|||++.+..|+.++|||||||++|+|++|..||.+.+..+..
T Consensus       291 -----~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~  365 (573)
T 3uto_A          291 -----KRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL  365 (573)
T ss_dssp             -----SSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH
T ss_pred             -----CCCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH
Confidence                 234679999999998765544  3457999999999999999999999999999999999999999998887777


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCC
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  358 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  358 (379)
                      ..+.+....++..                                             .+...+.++++||.+||+.||.
T Consensus       366 ~~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~dli~~~L~~dp~  400 (573)
T 3uto_A          366 RNVKSCDWNMDDS---------------------------------------------AFSGISEDGKDFIRKLLLADPN  400 (573)
T ss_dssp             HHHHTTCCCCCSG---------------------------------------------GGTTSCHHHHHHHHTTSCSSGG
T ss_pred             HHHHhCCCCCCcc---------------------------------------------cccCCCHHHHHHHHHHccCChh
Confidence            6665544333322                                             1234678899999999999999


Q ss_pred             CCcCHHHHhcCCCCCCCC
Q 017021          359 DRLTAREALRHPFFTRDH  376 (379)
Q Consensus       359 ~Rpta~e~l~hp~f~~~~  376 (379)
                      +|||++|+|+||||+..+
T Consensus       401 ~R~t~~e~l~Hpw~~~~~  418 (573)
T 3uto_A          401 TRMTIHQALEHPWLTPGN  418 (573)
T ss_dssp             GSCCHHHHHHSTTTSCCC
T ss_pred             HCcCHHHHhcCcCcCCCC
Confidence            999999999999998754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=2.9e-53  Score=388.77  Aligned_cols=248  Identities=21%  Similarity=0.310  Sum_probs=203.3

Q ss_pred             echhhhhhhhccccccceeEEEEEec-----CCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      +....|.+.++||+|+||+||+|++.     .++..||||+++.. ......+.+|+.++.++     .||||+++++++
T Consensus        10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-----~HpnIV~l~g~~   84 (299)
T 4asz_A           10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-----QHEHIVKFYGVC   84 (299)
T ss_dssp             CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEE
T ss_pred             cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhC-----CCCCCccEEEEE
Confidence            45567888999999999999999865     45789999999743 33456788899999888     789999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecc
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNN-----------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSS  181 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~-----------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~  181 (379)
                      .+++..|+||||| +|+|.+++...+           ...+++..+..++.||+.||+|||+++|+||||||+|||+   
T Consensus        85 ~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl---  161 (299)
T 4asz_A           85 VEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---  161 (299)
T ss_dssp             CSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---
T ss_pred             eeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEE---
Confidence            9999999999999 999999997642           2368999999999999999999999999999999999999   


Q ss_pred             cccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHH
Q 017021          182 EYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVG  256 (379)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG  256 (379)
                                              +.+..+||+|||+|+......     ....||+.|+|||++.+..|+.++||||||
T Consensus       162 ------------------------~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~G  217 (299)
T 4asz_A          162 ------------------------GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLG  217 (299)
T ss_dssp             ------------------------CGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ------------------------CCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHH
Confidence                                    455667788888776433221     234689999999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHH
Q 017021          257 CILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM  335 (379)
Q Consensus       257 ~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (379)
                      |++|||+| |+.||.+.+..+....+.+...+                      ..                        
T Consensus       218 vvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~----------------------~~------------------------  251 (299)
T 4asz_A          218 VVLWEIFTYGKQPWYQLSNNEVIECITQGRVL----------------------QR------------------------  251 (299)
T ss_dssp             HHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCC----------------------CC------------------------
T ss_pred             HHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC----------------------CC------------------------
Confidence            99999998 89999987776666555442211                      11                        


Q ss_pred             HhhccchhHHHHHHhhccccCCCCCcCHHHHh
Q 017021          336 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL  367 (379)
Q Consensus       336 ~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l  367 (379)
                        +..+++++.+||.+||+.||++|||++|++
T Consensus       252 --p~~~~~~~~~li~~cl~~dP~~RPs~~~i~  281 (299)
T 4asz_A          252 --PRTCPQEVYELMLGCWQREPHMRKNIKGIH  281 (299)
T ss_dssp             --CTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             --CccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence              123667899999999999999999999985

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=4.2e-53  Score=419.87  Aligned_cols=258  Identities=26%  Similarity=0.399  Sum_probs=209.2

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      ....-.|++.+.||+|+||.||+|+++.+|+.||+|++++..    ........|..++..+..  .+||||++++++|+
T Consensus       185 ~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~--~~HP~IV~l~~~f~  262 (689)
T 3v5w_A          185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST--GDCPFIVCMSYAFH  262 (689)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSS--SCCTTBCCEEEEEE
T ss_pred             CCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhh--CCCCCEeEEEEEEE
Confidence            344456899999999999999999999999999999997421    223334445444444322  37899999999999


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      +.+.+|+||||| ||+|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||+               
T Consensus       263 ~~~~lylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILl---------------  325 (689)
T 3v5w_A          263 TPDKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---------------  325 (689)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE---------------
T ss_pred             ECCEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEE---------------
Confidence            999999999999 999999998865  69999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCC-CCcccccCCccchhhhh-CCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                  +.++.+||+|||+|...... ..+.+||+.|+|||++. +..|+.++|+|||||++|+|++|.+||.+
T Consensus       326 ------------d~~G~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~  393 (689)
T 3v5w_A          326 ------------DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ  393 (689)
T ss_dssp             ------------CTTSCEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCG
T ss_pred             ------------eCCCCEEecccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                        56677888888888754433 34568999999999996 46799999999999999999999999976


Q ss_pred             CchHH---HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          272 HENLE---HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       272 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      .+..+   ....+.......                                                 ++..++++++|
T Consensus       394 ~~~~~~~~i~~~i~~~~~~~-------------------------------------------------p~~~S~~a~dL  424 (689)
T 3v5w_A          394 HKTKDKHEIDRMTLTMAVEL-------------------------------------------------PDSFSPELRSL  424 (689)
T ss_dssp             GGCCCHHHHHHHHHHCCCCC-------------------------------------------------CTTSCHHHHHH
T ss_pred             CChHHHHHHHHhhcCCCCCC-------------------------------------------------CccCCHHHHHH
Confidence            43222   111111111111                                                 12467899999


Q ss_pred             HhhccccCCCCCcC-----HHHHhcCCCCCCCC
Q 017021          349 LQGLLRYDPTDRLT-----AREALRHPFFTRDH  376 (379)
Q Consensus       349 i~~~L~~dP~~Rpt-----a~e~l~hp~f~~~~  376 (379)
                      |.+||+.||.+|++     |+|+++||||++.+
T Consensus       425 I~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~id  457 (689)
T 3v5w_A          425 LEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD  457 (689)
T ss_dssp             HHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCC
T ss_pred             HHHHccCCHhHCCCCCCCCHHHHhcCccccCCC
Confidence            99999999999998     89999999999864

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.2e-52  Score=389.78  Aligned_cols=251  Identities=22%  Similarity=0.332  Sum_probs=201.2

Q ss_pred             eechhhhhhhhccccccceeEEEEEec-----CCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      .+....+.+.++||+|+||.||+|+++     .+++.||||+++.. ......+.+|+.++.++     .|+||++++++
T Consensus        37 ~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-----~HpnIV~l~g~  111 (329)
T 4aoj_A           37 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-----QHQHIVRFFGV  111 (329)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTC-----CCTTBCCEEEE
T ss_pred             ccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEE
Confidence            345567788899999999999999865     46889999999743 33456788899999888     78999999999


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNN-------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLL  178 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~-------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili  178 (379)
                      +.+++.+|+||||| +|+|.+++....             ...+++.++..++.||+.||.|||+.+|+||||||+|||+
T Consensus       112 ~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl  191 (329)
T 4aoj_A          112 CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV  191 (329)
T ss_dssp             ECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             EEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEE
Confidence            99999999999999 999999997642             1258999999999999999999999999999999999999


Q ss_pred             ecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchH
Q 017021          179 VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIW  253 (379)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvw  253 (379)
                      +                           .+..+||+|||+|+......     ....||+.|+|||++.+..++.++|||
T Consensus       192 ~---------------------------~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvw  244 (329)
T 4aoj_A          192 G---------------------------QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVW  244 (329)
T ss_dssp             E---------------------------TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHH
T ss_pred             C---------------------------CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCcccccc
Confidence            4                           45566777777765432221     235689999999999999999999999


Q ss_pred             hHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHH
Q 017021          254 SVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN  332 (379)
Q Consensus       254 SlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (379)
                      ||||++|||+| |+.||...+..+....+.+...+                      ..|                    
T Consensus       245 S~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~----------------------~~p--------------------  282 (329)
T 4aoj_A          245 SFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL----------------------ERP--------------------  282 (329)
T ss_dssp             HHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCC----------------------CCC--------------------
T ss_pred             chHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC----------------------CCc--------------------
Confidence            99999999999 89999987776665554432111                      111                    


Q ss_pred             HHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          333 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       333 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                            ..+++++.+||.+||+.||++|||++|++++
T Consensus       283 ------~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          283 ------RACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             ------TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             ------ccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence                  2366789999999999999999999999754

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=3e-52  Score=382.31  Aligned_cols=255  Identities=24%  Similarity=0.328  Sum_probs=196.9

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      .+....+++.++||+|+||+||+|+++.   .||||+++..   ......+.+|+.++.++     .|+||+++++++..
T Consensus        32 ei~~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l-----~HpNIV~l~g~~~~  103 (307)
T 3omv_A           32 EIEASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKT-----RHVNILLFMGYMTK  103 (307)
T ss_dssp             BCCTTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEECS
T ss_pred             EEcHHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEC
Confidence            4555677889999999999999998643   4999998632   33446678899999888     78999999998764


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                       +.+|+||||| +|+|.+++.... ..+++..+..++.||+.||+|||+++|+||||||+|||++.              
T Consensus       104 -~~~~iVmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~--------------  167 (307)
T 3omv_A          104 -DNLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHE--------------  167 (307)
T ss_dssp             -SSCEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEET--------------
T ss_pred             -CeEEEEEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECC--------------
Confidence             5689999999 999999997654 36999999999999999999999999999999999999954              


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhhC---CCCCCccchHhHHHHHHHHHhCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~il~~l~~g~  266 (379)
                                   ++.+||+|||+|+.....     ....+||+.|+|||++.+   .+|+.++|||||||++|||+||+
T Consensus       168 -------------~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~  234 (307)
T 3omv_A          168 -------------GLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE  234 (307)
T ss_dssp             -------------TEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             -------------CCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCC
Confidence                         455666777766543221     133579999999999964   35899999999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||...+..+....+.......|.                    .                       ...+..+++++.
T Consensus       235 ~Pf~~~~~~~~~~~~~~~~~~~p~--------------------~-----------------------~~~~~~~~~~l~  271 (307)
T 3omv_A          235 LPYSHINNRDQIIFMVGRGYASPD--------------------L-----------------------SKLYKNCPKAMK  271 (307)
T ss_dssp             CTTTTCCCHHHHHHHHHTTCCCCC--------------------S-----------------------TTSCTTSCHHHH
T ss_pred             CCCCCCChHHHHHHHHhcCCCCCC--------------------c-----------------------ccccccchHHHH
Confidence            999876654433322221111110                    0                       011234678899


Q ss_pred             HHHhhccccCCCCCcCHHHH------hcCCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREA------LRHPFFT  373 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~------l~hp~f~  373 (379)
                      +||.+||+.||++|||++|+      |+|++.+
T Consensus       272 ~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk  304 (307)
T 3omv_A          272 RLVADCVKKVKEERPLFPQILSSIELLQHSLPK  304 (307)
T ss_dssp             HHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHhccCCC
Confidence            99999999999999999976      5777754

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.3e-52  Score=386.03  Aligned_cols=251  Identities=20%  Similarity=0.238  Sum_probs=203.6

Q ss_pred             eechhhhhhhhccccccceeEEEEEec-----CCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      .+....+++.++||+|+||+||+|+..     .+++.||||+++..  ......+.+|+.++.++     .||||+++++
T Consensus        22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l-----~HpNIV~l~g   96 (308)
T 4gt4_A           22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-----QHPNVVCLLG   96 (308)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC-----CCTTBCCEEE
T ss_pred             cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhC-----CCCCCCCcce
Confidence            345566788899999999999999853     46789999999643  33456788999999998     8899999999


Q ss_pred             eeeecceEEEEEeCC-CCCHHHHHHhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcE
Q 017021          112 WFDYRNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENV  176 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~~sL~~~l~~~~--------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Ni  176 (379)
                      ++.+++.+++||||| +|+|.+++....              ...+++..+..++.||+.||+|||+++|+||||||+||
T Consensus        97 ~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NI  176 (308)
T 4gt4_A           97 VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNV  176 (308)
T ss_dssp             EECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             EEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccce
Confidence            999999999999999 999999996532              12589999999999999999999999999999999999


Q ss_pred             EEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhhCCCCCCccc
Q 017021          177 LLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCD  251 (379)
Q Consensus       177 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sD  251 (379)
                      |++                           .+..+||+|||+|+.....     .....||+.|+|||++.+..|+.++|
T Consensus       177 Ll~---------------------------~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksD  229 (308)
T 4gt4_A          177 LVY---------------------------DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSD  229 (308)
T ss_dssp             EEC---------------------------GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHH
T ss_pred             EEC---------------------------CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccch
Confidence            994                           4455677777776532221     13357899999999999999999999


Q ss_pred             hHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhh
Q 017021          252 IWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL  330 (379)
Q Consensus       252 vwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (379)
                      ||||||++|||+| |..||.+.+..+....+.+...                      ++.                   
T Consensus       230 VwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~----------------------~~~-------------------  268 (308)
T 4gt4_A          230 IWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV----------------------LPC-------------------  268 (308)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCC----------------------CCC-------------------
T ss_pred             hhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC----------------------CCC-------------------
Confidence            9999999999998 8999998777665554433211                      111                   


Q ss_pred             HHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          331 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       331 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                             ++.++..+.+|+.+||+.||++|||++||+++
T Consensus       269 -------p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          269 -------PDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             -------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------cccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                   12366789999999999999999999999875

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=2.4e-50  Score=389.46  Aligned_cols=310  Identities=35%  Similarity=0.611  Sum_probs=248.2

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcC-CCCCeeEEecceeeecceEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD-KGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~-~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ...|++.++||+|+||.||+|.+..+++.||+|+++........+..|+.++..+.+.. ..|+|++.+++.+...+..+
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  175 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC  175 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence            45699999999999999999999999999999999876666677788999999987654 35789999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +||||++++|.+++.......+++..+..++.||+.||+|||+.||+||||||+||+++.++                  
T Consensus       176 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~------------------  237 (429)
T 3kvw_A          176 MTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQG------------------  237 (429)
T ss_dssp             EEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTT------------------
T ss_pred             EEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCC------------------
Confidence            99999988999999887655699999999999999999999999999999999999994321                  


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                             ...++|+|||.+...........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....
T Consensus       238 -------~~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~  310 (429)
T 3kvw_A          238 -------RSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLAC  310 (429)
T ss_dssp             -------SCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             -------CcceEEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                   2238999999997766666667899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchh----------hhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRE----------SIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      +.+..+.++..++.............+...+.......+          ........+.............++.+.+||+
T Consensus       311 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~  390 (429)
T 3kvw_A          311 MIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLK  390 (429)
T ss_dssp             HHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHH
T ss_pred             HHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHH
Confidence            999999999988876655443333332222111000000          0000111122222333344456788999999


Q ss_pred             hccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          351 GLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +||++||++||||+|+|+||||++..
T Consensus       391 ~~L~~dP~~Rpta~e~L~Hpw~~~~~  416 (429)
T 3kvw_A          391 QCLEWDPAVRMTPGQALRHPWLRRRL  416 (429)
T ss_dssp             HHTCSSTTTSCCHHHHHTSTTTC---
T ss_pred             HHCCCChhhCCCHHHHhCChhhccCC
Confidence            99999999999999999999999764

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2.7e-50  Score=380.46  Aligned_cols=324  Identities=40%  Similarity=0.687  Sum_probs=250.0

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .-.|++.++||+|+||.||+|++..+++.||+|+++...........|..++..+......|+||+++++++...+..|+
T Consensus        34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~l  113 (360)
T 3llt_A           34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCL  113 (360)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEE
T ss_pred             cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEE
Confidence            34789999999999999999999999999999999866666677778999999987655568999999999999999999


Q ss_pred             EEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          122 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      ||||++++|.+++.......+++..+..++.||+.||.|||+.||+||||||+||+++.....+-. .... ........
T Consensus       114 v~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~-~~~~-~~~~~~~~  191 (360)
T 3llt_A          114 IFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSL-ITVR-RVTDGKKI  191 (360)
T ss_dssp             EECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEE-EEEE-CTTTCCEE
T ss_pred             EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccc-cchh-cccccccc
Confidence            999999999999988765569999999999999999999999999999999999999642210000 0000 00000000


Q ss_pred             cccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM  281 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~  281 (379)
                      .........++|+|||.+...........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+
T Consensus       192 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~  271 (360)
T 3llt_A          192 QIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMM  271 (360)
T ss_dssp             EEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHH
Confidence            00012367899999999987666666778999999999999999999999999999999999999999999988999999


Q ss_pred             HHHcCCCChhHHHhhhhhhh-hhhcc--CCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCC
Q 017021          282 ERVLGPLPQHMLKRVDRHAE-KYVRR--GRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  358 (379)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  358 (379)
                      ....++.|..++........ .+...  ....|++.............      .........++.+.+||.+||+.||+
T Consensus       272 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~li~~~L~~dP~  345 (360)
T 3llt_A          272 ESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKK------CLPLYKIIKHELFCDFLYSILQIDPT  345 (360)
T ss_dssp             HHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHT------CCCHHHHCCCHHHHHHHHHHCCSSGG
T ss_pred             HHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhh------cccccccchHHHHHHHHHHHhcCChh
Confidence            99999999887766443222 12111  12334443333322221111      01112233457899999999999999


Q ss_pred             CCcCHHHHhcCCCCC
Q 017021          359 DRLTAREALRHPFFT  373 (379)
Q Consensus       359 ~Rpta~e~l~hp~f~  373 (379)
                      +||||+|+|+||||+
T Consensus       346 ~Rpta~elL~hp~f~  360 (360)
T 3llt_A          346 LRPSPAELLKHKFLE  360 (360)
T ss_dssp             GSCCHHHHTTSGGGC
T ss_pred             hCCCHHHHhcCcccC
Confidence            999999999999996

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=4e-51  Score=382.55  Aligned_cols=252  Identities=22%  Similarity=0.296  Sum_probs=201.0

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCC-----CceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRER-----KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~-----~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      .++...|++.++||+|+||.||+|.+..+     ++.||+|.++..  ......+.+|+.++.++    .+||||+++++
T Consensus        60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l----~hhpnIV~l~g  135 (353)
T 4ase_A           60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI----GHHLNVVNLLG  135 (353)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHH----CCCTTBCCEEE
T ss_pred             EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHc----CCCCcEEEEEE
Confidence            35567899999999999999999987654     468999999743  23345678899999998    34589999999


Q ss_pred             eeee-cceEEEEEeCC-CCCHHHHHHhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCc
Q 017021          112 WFDY-RNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPEN  175 (379)
Q Consensus       112 ~~~~-~~~~~lv~e~~-~~sL~~~l~~~~--------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~N  175 (379)
                      ++.. ++.+|+||||| +|+|.+++....              ...+++..+..++.||+.||+|||+++|+||||||+|
T Consensus       136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~N  215 (353)
T 4ase_A          136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN  215 (353)
T ss_dssp             EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccc
Confidence            8865 46799999999 999999997632              2348899999999999999999999999999999999


Q ss_pred             EEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCcc
Q 017021          176 VLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPC  250 (379)
Q Consensus       176 ili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~s  250 (379)
                      ||++                           .++.+||+|||+|+......     ....||+.|+|||++.+..|+.++
T Consensus       216 ILl~---------------------------~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ks  268 (353)
T 4ase_A          216 ILLS---------------------------EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS  268 (353)
T ss_dssp             EEEC---------------------------GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHH
T ss_pred             eeeC---------------------------CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcc
Confidence            9994                           44566777777776433322     234689999999999999999999


Q ss_pred             chHhHHHHHHHHHh-CCCCCCCCchHHH-HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccch
Q 017021          251 DIWSVGCILVELCT-GEALFQTHENLEH-LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP  328 (379)
Q Consensus       251 DvwSlG~il~~l~~-g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (379)
                      |||||||++|||+| |..||.+.+..+. ...+.+...                      +..|                
T Consensus       269 DVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~----------------------~~~p----------------  310 (353)
T 4ase_A          269 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR----------------------MRAP----------------  310 (353)
T ss_dssp             HHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCC----------------------CCCC----------------
T ss_pred             cEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCC----------------------CCCC----------------
Confidence            99999999999998 9999987654332 222222111                      1111                


Q ss_pred             hhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          329 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                                +.+++++.++|.+||+.||++|||++|+++|
T Consensus       311 ----------~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          311 ----------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             ----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------ccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence                      2356789999999999999999999999987

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2.5e-49  Score=369.03  Aligned_cols=251  Identities=23%  Similarity=0.356  Sum_probs=213.5

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      .-.|++.+.||+|+||.||+|.+..+|+.||+|++....   .....+.+|+.++..+     .|+||+++++++...+.
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~l~~~~~~~~~   88 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-----NHPNIVKLFEVIETEKT   88 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEECSSE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEECCE
Confidence            346899999999999999999999999999999997432   2345567899988888     78999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .|+||||+ +++|.+++...+  .+++..+..++.|++.||.|||+.||+||||||+||++                   
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll-------------------  147 (328)
T 3fe3_A           89 LYLIMEYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL-------------------  147 (328)
T ss_dssp             EEEEECCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE-------------------
T ss_pred             EEEEEECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEE-------------------
Confidence            99999999 899999997765  69999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCC-CccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWT-YPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                              +.++.++|+|||.+.......  ...+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.+.
T Consensus       148 --------~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  219 (328)
T 3fe3_A          148 --------DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL  219 (328)
T ss_dssp             --------CTTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             --------cCCCCEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH
Confidence                    566678888888886544332  345799999999999988775 789999999999999999999998776


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .+....+.......|                                                 ...++++.+||++||+
T Consensus       220 ~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~~L~  250 (328)
T 3fe3_A          220 KELRERVLRGKYRIP-------------------------------------------------FYMSTDCENLLKRFLV  250 (328)
T ss_dssp             HHHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHHCC
T ss_pred             HHHHHHHHhCCCCCC-------------------------------------------------CCCCHHHHHHHHHHCC
Confidence            665554444222222                                                 1256789999999999


Q ss_pred             cCCCCCcCHHHHhcCCCCCCC
Q 017021          355 YDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      .||.+|||++|+++||||+..
T Consensus       251 ~dP~~R~t~~eil~h~~~~~~  271 (328)
T 3fe3_A          251 LNPIKRGTLEQIMKDRWINAG  271 (328)
T ss_dssp             SSTTTSCCHHHHTTCTTTTTT
T ss_pred             CChhHCcCHHHHhcCHhhcCC
Confidence            999999999999999999864

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=2.8e-49  Score=365.52  Aligned_cols=284  Identities=27%  Similarity=0.490  Sum_probs=224.4

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc------hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      ...|++.++||+|+||+||+|+++.+++.||+|++....      .......+|+.++..+...  .|+|++++++++..
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~h~niv~~~~~~~~   85 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAF--EHPNVVRLMDVCAT   85 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHH--CCTTBCCEEEEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhc--CCCCeEEeeeeeec
Confidence            346899999999999999999999999999999987322      1234566788888777432  47999999999876


Q ss_pred             cc-----eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCc
Q 017021          116 RN-----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       116 ~~-----~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                      ..     ..++|||+++++|.+++.......+++..+..++.||+.||.|||+.||+||||||+||++            
T Consensus        86 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~------------  153 (308)
T 3g33_A           86 SRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV------------  153 (308)
T ss_dssp             CCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEE------------
T ss_pred             cCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE------------
Confidence            54     6899999998899999988765569999999999999999999999999999999999999            


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCC
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                                     +.++.++|+|||.+.......  ....||+.|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       154 ---------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p  218 (308)
T 3g33_A          154 ---------------TSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL  218 (308)
T ss_dssp             ---------------CTTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCS
T ss_pred             ---------------cCCCCEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCC
Confidence                           555678888888886544332  345789999999999998999999999999999999999999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |.+.+..+....+.+..+.++...|+.........       ++               +.............+..+.+|
T Consensus       219 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-------~~---------------~~~~~~~~~~~~~~~~~~~~l  276 (308)
T 3g33_A          219 FCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGA-------FP---------------PRGPRPVQSVVPEMEESGAQL  276 (308)
T ss_dssp             CCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGG-------SC---------------CCCCCCHHHHSCSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHhCCCChhhccchhhccccc-------cC---------------CCCCCcHHHhCccccHHHHHH
Confidence            99988888888888888777665433211111000       00               000011123345678899999


Q ss_pred             HhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          349 LQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      |.+||+.||++|||++|+|+||||++++
T Consensus       277 i~~~L~~dP~~R~t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          277 LLEMLTFNPHKRISAFRALQHSYLHKDE  304 (308)
T ss_dssp             HHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred             HHHHhcCCCccCCCHHHHhcCccccCCC
Confidence            9999999999999999999999999764

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=2.5e-49  Score=373.52  Aligned_cols=258  Identities=26%  Similarity=0.434  Sum_probs=218.3

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch-------hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      -.|++.+.||+|+||.||+|.++.+|+.||+|+++....       ....+.+|+.++..+     .|+||+++++++.+
T Consensus        12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~l~~~~~~   86 (361)
T 2yab_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-----LHPNIITLHDVYEN   86 (361)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-----CCTTBCCEEEEEEC
T ss_pred             hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-----CCcCCCcEEEEEEe
Confidence            358899999999999999999999999999999974322       235667888888877     68999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+..|+||||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++...+            
T Consensus        87 ~~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~------------  152 (361)
T 2yab_A           87 RTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN------------  152 (361)
T ss_dssp             SSEEEEEEECCCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTT------------
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCC------------
Confidence            99999999999 999999997654  699999999999999999999999999999999999995332            


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                 .....++|+|||.+.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus       153 -----------~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~  221 (361)
T 2yab_A          153 -----------IPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD  221 (361)
T ss_dssp             -----------SSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred             -----------CCccCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence                       122368999999987544432  3457999999999999989999999999999999999999999988


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+....+.......+...                                             +...+..+++||.+|
T Consensus       222 ~~~~~~~~i~~~~~~~~~~~---------------------------------------------~~~~s~~~~~li~~~  256 (361)
T 2yab_A          222 TKQETLANITAVSYDFDEEF---------------------------------------------FSQTSELAKDFIRKL  256 (361)
T ss_dssp             SHHHHHHHHHTTCCCCCHHH---------------------------------------------HTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHhcCCCCCchh---------------------------------------------ccCCCHHHHHHHHHH
Confidence            77766665554433333322                                             234678899999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      |+.||.+|||++|+++||||+..
T Consensus       257 L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          257 LVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             SCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             CCCChhHCcCHHHHhcCcCcCCC
Confidence            99999999999999999999864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=1.3e-48  Score=359.40  Aligned_cols=254  Identities=26%  Similarity=0.391  Sum_probs=213.4

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ....|++.++||+|+||+||+|.+..+++.||+|++... ......+.+|+.++..+     .|+||+++++++..++..
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~   92 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-----KNPNIVNYLDSYLVGDEL   92 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETTEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcC-----CCCCCCeEeEEEEECCEE
Confidence            456799999999999999999999999999999998643 23345567788888887     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++...   .+++..+..++.|++.||.|||+.||+||||||+||++                    
T Consensus        93 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~--------------------  149 (297)
T 3fxz_A           93 WVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL--------------------  149 (297)
T ss_dssp             EEEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE--------------------
T ss_pred             EEEEECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEE--------------------
Confidence            9999999 99999999875   48999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                             +.++.++|+|||.+.......   ....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus       150 -------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  222 (297)
T 3fxz_A          150 -------GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL  222 (297)
T ss_dssp             -------CTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred             -------CCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                   555678888888776544332   3457999999999999999999999999999999999999999887665


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      .....+.....+...                                              .....+..+.+||.+||+.
T Consensus       223 ~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~li~~~l~~  256 (297)
T 3fxz_A          223 RALYLIATNGTPELQ----------------------------------------------NPEKLSAIFRDFLNRCLEM  256 (297)
T ss_dssp             HHHHHHHHHCSCCCS----------------------------------------------CGGGSCHHHHHHHHHHSCS
T ss_pred             HHHHHHHhCCCCCCC----------------------------------------------CccccCHHHHHHHHHHccC
Confidence            544433332211100                                              0123567899999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||++|||++|+++||||+..
T Consensus       257 dp~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          257 DVEKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             STTTSCCHHHHTTCGGGGGC
T ss_pred             ChhHCcCHHHHhhChhhccc
Confidence            99999999999999999864

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=8.1e-49  Score=363.14  Aligned_cols=281  Identities=28%  Similarity=0.423  Sum_probs=222.9

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ..|++.++||+|+||+||+|++. +++.||+|++....   .....+.+|+.++..+     .|+||+++++++.+++..
T Consensus        21 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~   94 (311)
T 3niz_A           21 EKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-----HHPNIVSLIDVIHSERCL   94 (311)
T ss_dssp             CEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHC-----CCTTBCCEEEEECCSSCE
T ss_pred             hhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHc-----CCCCEeeeeeEEccCCEE
Confidence            46889999999999999999985 48999999997432   2335677899999888     789999999999999999


Q ss_pred             EEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       120 ~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      ++||||+.++|.+.+.... ..+++..+..++.||+.||.|||+.||+||||||+||++                     
T Consensus        95 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~---------------------  152 (311)
T 3niz_A           95 TLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI---------------------  152 (311)
T ss_dssp             EEEEECCSEEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---------------------
T ss_pred             EEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEE---------------------
Confidence            9999999779999887754 358999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                            +.++.++|+|||.+.......   ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+....
T Consensus       153 ------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  226 (311)
T 3niz_A          153 ------NSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD  226 (311)
T ss_dssp             ------CTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT
T ss_pred             ------CCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH
Confidence                  555678888888886544322   33468999999999876 56899999999999999999999999988888


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+....+.++...|+.+..........  ....+.                 .......+..+.++.+||.+||+.
T Consensus       227 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----------------~~~~~~~~~~~~~~~~li~~~L~~  287 (311)
T 3niz_A          227 DQLPKIFSILGTPNPREWPQVQELPLWKQRT--FQVFEK-----------------KPWSSIIPGFCQEGIDLLSNMLCF  287 (311)
T ss_dssp             THHHHHHHHHCCCCTTTSGGGTTSHHHHSCC--CCCCCC-----------------CCHHHHSTTCCHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHHCCCChHHhhhhhccchhhhcc--cccccC-----------------CcHHHhCcccCHHHHHHHHHHcCC
Confidence            8888888877776655544433222111100  000000                 001122345678899999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ||++|||++|+++||||++.+
T Consensus       288 dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          288 DPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             CTTTSCCHHHHHTSGGGTTSC
T ss_pred             ChhHCCCHHHHhcCcccccCC
Confidence            999999999999999999754

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=6.4e-49  Score=382.83  Aligned_cols=290  Identities=25%  Similarity=0.410  Sum_probs=227.7

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec--
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--  116 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~--  116 (379)
                      ...|++.++||+|+||.||+|.+..+++.||+|++...   ......+.+|+.++..+     .|+||+++++++...  
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~l~~~~~~~~~  135 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-----NHKNIISLLNVFTPQKT  135 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHC-----CCTTBCCCSEEECSCCS
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEccCCc
Confidence            35689999999999999999999999999999999742   33455667888888887     789999999998654  


Q ss_pred             ----ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          117 ----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       117 ----~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                          ..+|+||||+.++|.+.+..    .+++..+..++.||+.||+|||+.||+||||||+||++              
T Consensus       136 ~~~~~~~~lv~E~~~~~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll--------------  197 (464)
T 3ttj_A          136 LEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--------------  197 (464)
T ss_dssp             TTTCCEEEEEEECCSEEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE--------------
T ss_pred             cccCCeEEEEEeCCCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEE--------------
Confidence                46799999997778887753    48999999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                                   +.++.++|+|||.+.......  ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus       198 -------------~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~  264 (464)
T 3ttj_A          198 -------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP  264 (464)
T ss_dssp             -------------CTTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             -------------eCCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCC
Confidence                         556678888888887554432  34579999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      +.+..+....+.+..|.++.+.++.+......+..+.. .+... ............     .........++++.+||.
T Consensus       265 g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~-----~~~~~~~~~s~~~~dLl~  337 (464)
T 3ttj_A          265 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRP-KYAGL-TFPKLFPDSLFP-----ADSEHNKLKASQARDLLS  337 (464)
T ss_dssp             CSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSC-CCCCC-CHHHHSCGGGSC-----CSSHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhccc-ccCCC-ChHHhCcccccc-----cccccccccCHHHHHHHH
Confidence            99999999999999999999988888777766655421 11110 000000000000     000111223678999999


Q ss_pred             hccccCCCCCcCHHHHhcCCCCCC
Q 017021          351 GLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      +||+.||++|||++|+|+||||+.
T Consensus       338 ~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          338 KMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             HHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             HHcCCChhhCCCHHHHhcChhhhh
Confidence            999999999999999999999974

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.8e-49  Score=367.81  Aligned_cols=257  Identities=22%  Similarity=0.379  Sum_probs=220.6

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      ..|++.+.||+|+||.||+|.++.+++.||+|++.........+.+|+.++..+     .|+|++++++++.+.+..++|
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~~~~~~~~lv   79 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-----RHRNILHLHESFESMEELVMI   79 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHS-----CCTTBCCEEEEEEETTEEEEE
T ss_pred             hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhC-----CCCCCCeEeEEEecCCEEEEE
Confidence            368899999999999999999999999999999986655566777899999887     789999999999999999999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      |||+ +++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||+++.                     
T Consensus        80 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~---------------------  137 (321)
T 1tki_A           80 FEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT---------------------  137 (321)
T ss_dssp             ECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS---------------------
T ss_pred             EEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcc---------------------
Confidence            9999 889999997643 35899999999999999999999999999999999999943                     


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  279 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~  279 (379)
                          ..++.++|+|||.+.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+...
T Consensus       138 ----~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  213 (321)
T 1tki_A          138 ----RRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIE  213 (321)
T ss_dssp             ----SSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred             ----CCCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHH
Confidence                125678999999887654433  33578999999999998888999999999999999999999999887776666


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                      .+.+....++...                                             +...+.++.+||.+||+.||.+
T Consensus       214 ~i~~~~~~~~~~~---------------------------------------------~~~~s~~~~~li~~~L~~dp~~  248 (321)
T 1tki_A          214 NIMNAEYTFDEEA---------------------------------------------FKEISIEAMDFVDRLLVKERKS  248 (321)
T ss_dssp             HHHHTCCCCCHHH---------------------------------------------HTTSCHHHHHHHHTTSCSSGGG
T ss_pred             HHHcCCCCCChhh---------------------------------------------hccCCHHHHHHHHHHcCCChhH
Confidence            6555444433322                                             2346788999999999999999


Q ss_pred             CcCHHHHhcCCCCCCC
Q 017021          360 RLTAREALRHPFFTRD  375 (379)
Q Consensus       360 Rpta~e~l~hp~f~~~  375 (379)
                      |||+.|+|+||||++.
T Consensus       249 Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          249 RMTASEALQHPWLKQK  264 (321)
T ss_dssp             SCCHHHHHHSHHHHSC
T ss_pred             CcCHHHHhcChhhccC
Confidence            9999999999999765

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1.2e-48  Score=365.57  Aligned_cols=252  Identities=25%  Similarity=0.415  Sum_probs=212.1

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      ...|++.+.||+|+||.||+|+++.+|+.||+|+++..    .........|..++..+     .|++++++++++.+.+
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~l~~~~~~~~   78 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-----RHPFLTALKYAFQTHD   78 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-----CCTTBCCEEEEEECSS
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-----CCCcCcceEEEEEeCC
Confidence            34688999999999999999999999999999999743    22345566788877766     7899999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..|+||||+ +++|.+++....  .+++..++.++.||+.||.|||+.||+||||||+||++                  
T Consensus        79 ~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll------------------  138 (337)
T 1o6l_A           79 RLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML------------------  138 (337)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE------------------
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEE------------------
Confidence            999999999 899999998754  68999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                               +.++.++|+|||++......   ....+||+.|+|||++.+..++.++|+|||||++|+|++|..||...+
T Consensus       139 ---------~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  209 (337)
T 1o6l_A          139 ---------DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD  209 (337)
T ss_dssp             ---------CTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ---------CCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC
Confidence                     55567888888877643222   234679999999999999899999999999999999999999998876


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.......|                                                 ...++++.+||.+||
T Consensus       210 ~~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~lL  240 (337)
T 1o6l_A          210 HERLFELILMEEIRFP-------------------------------------------------RTLSPEAKSLLAGLL  240 (337)
T ss_dssp             HHHHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCCCC-------------------------------------------------CCCCHHHHHHHHHHh
Confidence            6555544433211111                                                 135678999999999


Q ss_pred             ccCCCCCc-----CHHHHhcCCCCCCCC
Q 017021          354 RYDPTDRL-----TAREALRHPFFTRDH  376 (379)
Q Consensus       354 ~~dP~~Rp-----ta~e~l~hp~f~~~~  376 (379)
                      +.||.+||     +++|+++||||+..+
T Consensus       241 ~~dP~~R~g~~~~~~~ei~~h~~f~~~~  268 (337)
T 1o6l_A          241 KKDPKQRLGGGPSDAKEVMEHRFFLSIN  268 (337)
T ss_dssp             CSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             hcCHHHhcCCCCCCHHHHHcCCCcCCCC
Confidence            99999999     999999999998754

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=2.1e-48  Score=363.55  Aligned_cols=322  Identities=46%  Similarity=0.836  Sum_probs=247.6

Q ss_pred             hhhhhhhhccccccceeEEEEEe-cCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcC-CCCCeeEEecceeeecceE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWD-RERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD-KGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~-~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~-~~~~~i~~~~~~~~~~~~~  119 (379)
                      ...|++.+.||+|+||.||+|.+ +.+++.||+|+++...........|+.++..+.+.. ..+++++.+++++...+..
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~   92 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI   92 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence            34789999999999999999998 568899999999866666677888999999987653 3456799999999999999


Q ss_pred             EEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       120 ~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      ++||||++++|.+++.......+++..+..++.||+.||.|||+.||+||||||+||++...+.....+.+..       
T Consensus        93 ~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~-------  165 (339)
T 1z57_A           93 CIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIK-------  165 (339)
T ss_dssp             EEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC-----------
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccc-------
Confidence            9999999999999998876556899999999999999999999999999999999999965332111100000       


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  279 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~  279 (379)
                       .......+..++|+|||.+...........||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+...
T Consensus       166 -~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  244 (339)
T 1z57_A          166 -RDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA  244 (339)
T ss_dssp             -CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHH
T ss_pred             -cccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence             0000012567999999999876666666789999999999999899999999999999999999999999988888888


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                      .+.+..+++|..++......  .+......+|............... +.  .......+..+.++.+||.+||+.||.+
T Consensus       245 ~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~l~~li~~~L~~dP~~  319 (339)
T 1z57_A          245 MMERILGPLPKHMIQKTRKR--KYFHHDRLDWDEHSSAGRYVSRACK-PL--KEFMLSQDVEHERLFDLIQKMLEYDPAK  319 (339)
T ss_dssp             HHHHHHCSCCHHHHHHCSCG--GGEETTEECCCTTSHHHHHHHHHCC-CG--GGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred             HHHHHhCCCCHHHHhhccch--hHHhhccccccccccccchhhhcCc-ch--hhhcccchhhHHHHHHHHHHHhCcCccc
Confidence            89999999998887765432  2222233344432211111111100 00  0000112234678999999999999999


Q ss_pred             CcCHHHHhcCCCCCCCC
Q 017021          360 RLTAREALRHPFFTRDH  376 (379)
Q Consensus       360 Rpta~e~l~hp~f~~~~  376 (379)
                      |||++|+++||||++..
T Consensus       320 Rpt~~ell~hp~f~~~~  336 (339)
T 1z57_A          320 RITLREALKHPFFDLLK  336 (339)
T ss_dssp             SCCHHHHTTSGGGGGGG
T ss_pred             ccCHHHHhcCHHHHHHh
Confidence            99999999999998643

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=4.9e-49  Score=370.56  Aligned_cols=255  Identities=25%  Similarity=0.384  Sum_probs=210.7

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      +....|++.+.||+|+||.||+|+++.+++.||+|+++..    .........|..++..+    ..|++|+++++++.+
T Consensus        20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~----~~hp~Iv~l~~~~~~   95 (353)
T 3txo_A           20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA----RNHPFLTQLFCCFQT   95 (353)
T ss_dssp             ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHT----TTCTTBCCEEEEEEC
T ss_pred             CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhc----cCCCceeeEEEEEEe
Confidence            3345688999999999999999999999999999999743    22334455677777665    267999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+..|+||||+ +++|.+++....  .+++..++.++.||+.||.|||+.||+||||||+|||+                
T Consensus        96 ~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl----------------  157 (353)
T 3txo_A           96 PDRLFFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL----------------  157 (353)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----------------
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEE----------------
Confidence            99999999999 899999998764  69999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                 +.++.++|+|||++......   ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus       158 -----------~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~  226 (353)
T 3txo_A          158 -----------DHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA  226 (353)
T ss_dssp             -----------CTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -----------CCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC
Confidence                       55667888888887643222   2345799999999999988899999999999999999999999998


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .+..+....+.......|                                                 ...+..+.+||++
T Consensus       227 ~~~~~~~~~i~~~~~~~p-------------------------------------------------~~~~~~~~~li~~  257 (353)
T 3txo_A          227 ENEDDLFEAILNDEVVYP-------------------------------------------------TWLHEDATGILKS  257 (353)
T ss_dssp             SSHHHHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCCCC-------------------------------------------------CCCCHHHHHHHHH
Confidence            887776665554332222                                                 1256789999999


Q ss_pred             ccccCCCCCcCH------HHHhcCCCCCCCC
Q 017021          352 LLRYDPTDRLTA------REALRHPFFTRDH  376 (379)
Q Consensus       352 ~L~~dP~~Rpta------~e~l~hp~f~~~~  376 (379)
                      ||+.||.+||++      +|+++||||++.+
T Consensus       258 lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~  288 (353)
T 3txo_A          258 FMTKNPTMRLGSLTQGGEHAILRHPFFKEID  288 (353)
T ss_dssp             HTCSSGGGSTTSGGGTCTHHHHTSGGGTTCC
T ss_pred             HhhhCHHHccCCcccCCHHHHhhCCcccCCC
Confidence            999999999998      9999999998753

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-48  Score=363.15  Aligned_cols=253  Identities=26%  Similarity=0.400  Sum_probs=215.9

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      ....|++.+.||+|+||.||+|+++.+|+.||+|+++...    ........|..++..+     .|++|+++++++.+.
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~Iv~~~~~~~~~   78 (318)
T 1fot_A            4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-----THPFIIRMWGTFQDA   78 (318)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-----CBTTBCCEEEEEECS
T ss_pred             ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-----CCCCCceEeEEEEeC
Confidence            3456889999999999999999999999999999997432    2334556677777766     789999999999999


Q ss_pred             ceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          117 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       117 ~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      ...|+||||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++                 
T Consensus        79 ~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll-----------------  139 (318)
T 1fot_A           79 QQIFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL-----------------  139 (318)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE-----------------
T ss_pred             CEEEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEE-----------------
Confidence            9999999999 899999998765  68999999999999999999999999999999999999                 


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                                +.++.++|+|||.+...........||+.|+|||++.+..++.++|+|||||++|+|++|..||...+..
T Consensus       140 ----------~~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  209 (318)
T 1fot_A          140 ----------DKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM  209 (318)
T ss_dssp             ----------CTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             ----------cCCCCEEEeecCcceecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH
Confidence                      5566788888888876655555678999999999999999999999999999999999999999887766


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.+.....|                                                 ...+.++.++|.+||+.
T Consensus       210 ~~~~~i~~~~~~~p-------------------------------------------------~~~~~~~~~li~~lL~~  240 (318)
T 1fot_A          210 KTYEKILNAELRFP-------------------------------------------------PFFNEDVKDLLSRLITR  240 (318)
T ss_dssp             HHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHHhCCCCCC-------------------------------------------------CCCCHHHHHHHHHHhcc
Confidence            65554443222211                                                 13567899999999999


Q ss_pred             CCCCCc-----CHHHHhcCCCCCCCC
Q 017021          356 DPTDRL-----TAREALRHPFFTRDH  376 (379)
Q Consensus       356 dP~~Rp-----ta~e~l~hp~f~~~~  376 (379)
                      ||++||     +++|+++||||++..
T Consensus       241 dp~~R~~~~~~~~~~i~~hp~f~~~~  266 (318)
T 1fot_A          241 DLSQRLGNLQNGTEDVKNHPWFKEVV  266 (318)
T ss_dssp             CTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred             CHHHcCCCcCCCHHHHhcCccccCCC
Confidence            999999     999999999998753

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1.5e-48  Score=372.76  Aligned_cols=326  Identities=30%  Similarity=0.525  Sum_probs=238.9

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCC---CCCeeEEecceee----
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK---GGNRCVQIRNWFD----  114 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~---~~~~i~~~~~~~~----  114 (379)
                      ...|++.++||+|+||.||+|++..+++.||+|+++........+.+|+.++..+.+...   +|++++++++.+.    
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            356899999999999999999999999999999998766667788899999999976442   3677999999887    


Q ss_pred             ecceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      ...+.|+||||++++|.+.+.......+++..++.++.||+.||.|||++ ||+||||||+|||++.++.....+++...
T Consensus       116 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~  195 (397)
T 1wak_A          116 NGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEAT  195 (397)
T ss_dssp             TEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC
T ss_pred             CCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhH
Confidence            56689999999988888888776545799999999999999999999998 99999999999999765421111100000


Q ss_pred             CC------CCC-------------C---cccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccc
Q 017021          194 HT------PKD-------------S---SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCD  251 (379)
Q Consensus       194 ~~------~~~-------------~---~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sD  251 (379)
                      ..      +..             .   ...........++|+|||.+...........||+.|+|||++.+..++.++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  275 (397)
T 1wak_A          196 EWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPAD  275 (397)
T ss_dssp             ---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHH
T ss_pred             HHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHH
Confidence            00      000             0   0000001234799999999987666666678999999999999999999999


Q ss_pred             hHhHHHHHHHHHhCCCCCCCCc------hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhc
Q 017021          252 IWSVGCILVELCTGEALFQTHE------NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM  325 (379)
Q Consensus       252 vwSlG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (379)
                      ||||||++|+|++|..||...+      ..+....+.+..+.+|..++.........+...+................+ 
T Consensus       276 iwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  354 (397)
T 1wak_A          276 IWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL-  354 (397)
T ss_dssp             HHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHH-
T ss_pred             HHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhh-
Confidence            9999999999999999997654      455667778888988887765433322222222211111110000000000 


Q ss_pred             cchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          326 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                            ..........+..+.+||.+||+.||++|||++|+|+||||++
T Consensus       355 ------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          355 ------VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             ------HHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             ------hhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence                  0000112345678999999999999999999999999999974

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=9.4e-50  Score=367.29  Aligned_cols=192  Identities=23%  Similarity=0.275  Sum_probs=152.7

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc----e
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN----H  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~----~  118 (379)
                      ..|.+.++||+|+||+||+|++  +|+.||||+++...........|+..+..+     .|+||+++++++.+++    .
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l-----~HpNIv~l~g~~~~~~~~~~~   75 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVML-----RHENILGFIAADNKDNGTWTQ   75 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTC-----CCTTBCCEEEEEEEECSSSEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhhHHHHHHHHHHhcC-----CCCCCCcEEEEEEecCCCceE
Confidence            3578889999999999999986  589999999975433222222233333333     7899999999987653    6


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc--------CCcccCCCCCcEEEecccccccCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL--------CMIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~--------~iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                      +|+||||| +|+|.+++...   .+++.....++.|++.||+|||++        +|+||||||+|||+           
T Consensus        76 ~~lV~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl-----------  141 (303)
T 3hmm_A           76 LWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV-----------  141 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEE-----------
T ss_pred             EEEEecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEE-----------
Confidence            89999999 99999999875   489999999999999999999987        89999999999999           


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-------CcccccCCccchhhhhCC------CCCCccchHhHH
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGL------GWTYPCDIWSVG  256 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlG  256 (379)
                                      +.++.+||+|||+|+......       ...+||+.|+|||++.+.      .++.++||||||
T Consensus       142 ----------------~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~G  205 (303)
T 3hmm_A          142 ----------------KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG  205 (303)
T ss_dssp             ----------------CTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHH
T ss_pred             ----------------CCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHH
Confidence                            555667777777775433221       234799999999999764      366799999999


Q ss_pred             HHHHHHHhCCCCCCC
Q 017021          257 CILVELCTGEALFQT  271 (379)
Q Consensus       257 ~il~~l~~g~~pf~~  271 (379)
                      |++|||+||..||..
T Consensus       206 vvl~El~tg~~~~~~  220 (303)
T 3hmm_A          206 LVFWEIARRCSIGGI  220 (303)
T ss_dssp             HHHHHHHHTBCBTTB
T ss_pred             HHHHHHHHCCCCCCc
Confidence            999999999887754

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.1e-49  Score=371.36  Aligned_cols=279  Identities=27%  Similarity=0.491  Sum_probs=224.9

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec---
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---  116 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~---  116 (379)
                      ..|++.+.||+|+||.||+|.++.+|+.||+|++...   ......+.+|+.++..+     .|+||+.+++++...   
T Consensus        25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~l~~~~~~~~~~   99 (367)
T 1cm8_A           25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-----RHENVIGLLDVFTPDETL   99 (367)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-----CBTTBCCCSEEECSCSST
T ss_pred             ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-----CCcCCCCceeeEecCCcc
Confidence            4689999999999999999999999999999998532   23345677899999888     679999999998765   


Q ss_pred             ---ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          117 ---NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       117 ---~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                         ..+|+||||++++|.+++...   .+++..+..++.||+.||.|||+.||+||||||+||++               
T Consensus       100 ~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll---------------  161 (367)
T 1cm8_A          100 DDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---------------  161 (367)
T ss_dssp             TTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---------------
T ss_pred             ccCceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEE---------------
Confidence               346999999999999999874   48999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                  +.++.++|+|||.+...........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.
T Consensus       162 ------------~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  229 (367)
T 1cm8_A          162 ------------NEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS  229 (367)
T ss_dssp             ------------CTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ------------cCCCCEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCC
Confidence                        55667888999988776655566789999999999887 67899999999999999999999999999


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhh-hhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      +..+....+.+..+.++.+.+..+.... ..+... ....+.                  ..........++.+.+||.+
T Consensus       230 ~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------------~~~~~~~~~~~~~~~~ll~~  290 (367)
T 1cm8_A          230 DHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG-LPELEK------------------KDFASILTNASPLAVNLLEK  290 (367)
T ss_dssp             SHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHH-SCCCCC------------------CCGGGTCTTCCHHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHh-CCCCCC------------------CCHHHHCCCCCHHHHHHHHH
Confidence            9989999999999999988877654322 222211 000000                  00011223467889999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||+.||.+|||++|+|+||||++-
T Consensus       291 mL~~dP~~R~t~~e~l~hp~f~~~  314 (367)
T 1cm8_A          291 MLVLDAEQRVTAGEALAHPYFESL  314 (367)
T ss_dssp             HSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             HccCChhHCCCHHHHhcChHHHhh
Confidence            999999999999999999999864

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=2.5e-48  Score=370.07  Aligned_cols=308  Identities=35%  Similarity=0.647  Sum_probs=236.1

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCC-CCCeeEEecceeeecceEEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK-GGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~-~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ..|++.+.||+|+||+||+|.++.+++.||+|+++...........|+.++..+.++.. .+++++.+.+.+...+..|+
T Consensus        54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  133 (382)
T 2vx3_A           54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCL  133 (382)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEE
T ss_pred             eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEE
Confidence            57899999999999999999999999999999998665556677778888888865432 33468999999999999999


Q ss_pred             EEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH--HcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          122 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH--DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH--~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      ||||++++|.+++.......+++..+..++.|++.||.|||  +.||+||||||+||++..                   
T Consensus       134 v~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~-------------------  194 (382)
T 2vx3_A          134 VFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN-------------------  194 (382)
T ss_dssp             EEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS-------------------
T ss_pred             EEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec-------------------
Confidence            99999889999998865456999999999999999999999  579999999999999943                   


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  279 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~  279 (379)
                            +..+.++|+|||.+...........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+...
T Consensus       195 ------~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~  268 (382)
T 2vx3_A          195 ------PKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMN  268 (382)
T ss_dssp             ------TTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             ------CCCCcEEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                  23567899999999877666666789999999999999999999999999999999999999999999889888


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCC----------CCCchhhhhhhcc----chhhHH-HHHHhhccchhH
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE----------GAASRESIKSVMK----LPRLQN-LIMQHVDHSAGD  344 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~  344 (379)
                      .+.+..+.+|..+++........+.......|..          .......+...+.    .+.... ...........+
T Consensus       269 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (382)
T 2vx3_A          269 KIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLK  348 (382)
T ss_dssp             HHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHH
T ss_pred             HHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHH
Confidence            9999899988887765433221111110000000          0000000100000    000000 000000112357


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +.+||.+||+.||++||||+|+|+||||++.
T Consensus       349 ~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          349 FKDLILRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             HHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             HHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence            9999999999999999999999999999864

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.3e-48  Score=371.08  Aligned_cols=312  Identities=24%  Similarity=0.417  Sum_probs=211.7

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec--c
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--N  117 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~--~  117 (379)
                      ..|++.++||+|+||.||+|.++.+|+.||+|++...   ........+|+.++..+    .+|+||+++++++...  .
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l----~~h~niv~l~~~~~~~~~~   84 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTEL----SGHENIVNLLNVLRADNDR   84 (388)
T ss_dssp             TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHT----TTCTTBCCEEEEEECTTSS
T ss_pred             CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhc----cCCCCCCeeeeEEecCCCC
Confidence            4688999999999999999999999999999998532   33345566788888877    2489999999998754  4


Q ss_pred             eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          118 HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       118 ~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .+|+||||++++|.+++...   .++...+..++.||+.||.|||+.||+||||||+||+++.++.+|++|||++.....
T Consensus        85 ~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  161 (388)
T 3oz6_A           85 DVYLVFDYMETDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVN  161 (388)
T ss_dssp             CEEEEEECCSEEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSS
T ss_pred             EEEEEecccCcCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccc
Confidence            79999999988999999874   489999999999999999999999999999999999996655555555555432211


Q ss_pred             CCcccccCCCCCCeEEeecCcc-cccCCCCCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          198 DSSYFKRMPKSSAIKVIDFGST-TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~-~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                      ......    ............ ..........+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..
T Consensus       162 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~  237 (388)
T 3oz6_A          162 IRRVTN----NIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM  237 (388)
T ss_dssp             CCCCCC----CGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             cccccc----cccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            100000    000000000000 000011123579999999999976 67899999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhh-hhhhcc----CCCCCCCCCCchhhhhhhccchhhHHHHH--HhhccchhHHHHH
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHA-EKYVRR----GRLDWPEGAASRESIKSVMKLPRLQNLIM--QHVDHSAGDLTHL  348 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l  348 (379)
                      +....+....+.++.+.+..+.... ..+...    ............         +.......  ......++++.+|
T Consensus       238 ~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dl  308 (388)
T 3oz6_A          238 NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIF---------TKWKNLLLKINPKADCNEEALDL  308 (388)
T ss_dssp             HHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCH---------HHHHHHHHHHCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhC---------cchhhhcccccccccCCHHHHHH
Confidence            9999998888888877665432211 111100    000000000000         00011111  1122567899999


Q ss_pred             HhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          349 LQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      |.+||+.||++|||++|+|+||||+.
T Consensus       309 l~~~L~~dP~~R~t~~e~l~Hp~~~~  334 (388)
T 3oz6_A          309 LDKLLQFNPNKRISANDALKHPFVSI  334 (388)
T ss_dssp             HHHHCCSSGGGSCCHHHHTTSTTTTT
T ss_pred             HHHhhccCcccCCCHHHHhCCHHHHH
Confidence            99999999999999999999999875

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=8.5e-49  Score=359.55  Aligned_cols=279  Identities=28%  Similarity=0.473  Sum_probs=220.3

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.++||+|+||+||+|+++.+++.||+|++....   .....+.+|+.++.++     .|+|++++++++.+++..+
T Consensus         3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~   77 (292)
T 3o0g_A            3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-----KHKNIVRLHDVLHSDKKLT   77 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEETTEEE
T ss_pred             CceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcC-----CCCCEeeEEeEEEeCCEEE
Confidence            5889999999999999999999999999999997432   2335666788888777     6899999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +||||+++++.+.+.... ..+++..+..++.|++.||.|||+.||+||||||+||++                      
T Consensus        78 lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~----------------------  134 (292)
T 3o0g_A           78 LVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI----------------------  134 (292)
T ss_dssp             EEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----------------------
T ss_pred             EEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----------------------
Confidence            999999778888876643 369999999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCC-CCCccchHhHHHHHHHHHhCCCC-CCCCchH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEAL-FQTHENL  275 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~il~~l~~g~~p-f~~~~~~  275 (379)
                           +.++.++|+|||.+.......   ....||+.|+|||++.+.. ++.++|||||||++|+|++|..| |.+.+..
T Consensus       135 -----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~  209 (292)
T 3o0g_A          135 -----NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD  209 (292)
T ss_dssp             -----CTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHH
T ss_pred             -----cCCCCEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHH
Confidence                 556678888888886543222   3357899999999998765 79999999999999999987766 5666667


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.+..+.++...|+.........      ..+....              ...........+..+++||++||+.
T Consensus       210 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~--------------~~~~~~~~~~~~~~~~~li~~~L~~  269 (292)
T 3o0g_A          210 DQLKRIFRLLGTPTEEQWPSMTKLPDYK------PYPMYPA--------------TTSLVNVVPKLNATGRDLLQNLLKC  269 (292)
T ss_dssp             HHHHHHHHHHCCCCTTTCTTGGGSTTCC------CCCCCCT--------------TCCCTTTSTTCCHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHhCCCChhhhhhhccccccc------ccccccC--------------CcchhhcccccChHHHHHHHHHhcc
Confidence            7777888878777766555433321110      0000000              0000112234678899999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||++|||++|+++||||++-
T Consensus       270 dP~~R~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          270 NPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             SGGGSCCHHHHHTSGGGTTC
T ss_pred             ChhhCCCHHHHhcCcccccC
Confidence            99999999999999999863

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=4e-48  Score=360.88  Aligned_cols=259  Identities=24%  Similarity=0.435  Sum_probs=218.4

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch-------hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      ..|++.+.||+|+||.||+|.++.+|+.||+|+++....       ....+.+|+.++..+     .|+|++++++++.+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~   85 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-----QHPNVITLHEVYEN   85 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-----CCTTBCCEEEEEEC
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-----CCCCCCcEEEEEEe
Confidence            468899999999999999999999999999999974321       245677899999888     68999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      ....++||||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++..++            
T Consensus        86 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~------------  151 (326)
T 2y0a_A           86 KTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN------------  151 (326)
T ss_dssp             SSEEEEEEECCCSCBHHHHHTTSS--CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSS------------
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCC------------
Confidence            99999999999 899999997654  699999999999999999999999999999999999995432            


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCC--CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                 .....++|+|||.+......  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus       152 -----------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  220 (326)
T 2y0a_A          152 -----------VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD  220 (326)
T ss_dssp             -----------SSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred             -----------CCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence                       22347899999988755432  23457999999999999889999999999999999999999999887


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      ...+....+.......+..                                             .+...+..+.+||.+|
T Consensus       221 ~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~li~~~  255 (326)
T 2y0a_A          221 TKQETLANVSAVNYEFEDE---------------------------------------------YFSNTSALAKDFIRRL  255 (326)
T ss_dssp             SHHHHHHHHHHTCCCCCHH---------------------------------------------HHTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHhcCCCcCcc---------------------------------------------ccccCCHHHHHHHHHH
Confidence            7766665554443333322                                             1234677899999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      |+.||.+|||++|+++||||+...
T Consensus       256 L~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          256 LVKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             SCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             ccCChhhCCCHHHHhcCCCccCCc
Confidence            999999999999999999998754

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.3e-48  Score=362.69  Aligned_cols=287  Identities=29%  Similarity=0.467  Sum_probs=213.5

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ...|++.++||+|+||.||+|.++.+|+.||+|+++...  .....+.+|+.++..+     .|+||+++++++..++..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~   78 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-----KHENIVRLYDVIHTENKL   78 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTC-----CBTTBCCEEEEECCTTEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhc-----CCCCcceEEEEEEECCeE
Confidence            346899999999999999999999999999999997432  2335667888888877     679999999999999999


Q ss_pred             EEEEeCCCCCHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          120 CIVFEKLGSSLYDFLRKNN----YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       120 ~lv~e~~~~sL~~~l~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      |+||||+.++|.+++....    ...+++..+..++.||+.||.|||+.||+||||||+||++                 
T Consensus        79 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~-----------------  141 (317)
T 2pmi_A           79 TLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLI-----------------  141 (317)
T ss_dssp             EEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE-----------------
T ss_pred             EEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEE-----------------
Confidence            9999999889999987532    1358999999999999999999999999999999999999                 


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                +.++.++|+|||.+......   .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+
T Consensus       142 ----------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  211 (317)
T 2pmi_A          142 ----------NKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPG  211 (317)
T ss_dssp             ----------CTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ----------cCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                      55567888888887654332   233578999999999976 4689999999999999999999999999


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .+..+....+.+..+.+++..|+.+........     ..+...          ................+.++.+||.+
T Consensus       212 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~li~~  276 (317)
T 2pmi_A          212 TNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNP-----NIQQRP----------PRDLRQVLQPHTKEPLDGNLMDFLHG  276 (317)
T ss_dssp             SSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCT-----TCCCCC----------CCCSHHHHGGGCSSCCCHHHHHHHHH
T ss_pred             CChHHHHHHHHHHhCCCChhHhhhhhhhhhccc-----cccccc----------chhHHHhhcccccccCCHHHHHHHHH
Confidence            888888888888888877766655433211100     000000          00000011111223567889999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||+.||++|||++|+++||||++.
T Consensus       277 ~L~~dP~~Rpt~~e~l~hp~f~~~  300 (317)
T 2pmi_A          277 LLQLNPDMRLSAKQALHHPWFAEY  300 (317)
T ss_dssp             HSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             HCCCCcccCCCHHHHhCChhhhcc
Confidence            999999999999999999999863

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=3.9e-48  Score=374.75  Aligned_cols=256  Identities=24%  Similarity=0.395  Sum_probs=217.1

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ..|++.+.||+|+||.||+|.++.+|+.||+|++....   .....+.+|+.++..+     .|+||+++++++.+++..
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~l~~~~~~~~~~   85 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-----KHPNIVRLHDSISEEGHH   85 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHC-----CBTTBCCEEEEEECSSEE
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-----CCcCCCeEEEEEEECCEE
Confidence            46889999999999999999999999999999997432   2345567899998888     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+.+....  .+++..+..++.||+.||.|||+.||+||||||+||+++..                 
T Consensus        86 ~lv~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~-----------------  146 (444)
T 3soa_A           86 YLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASK-----------------  146 (444)
T ss_dssp             EEEECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBS-----------------
T ss_pred             EEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecc-----------------
Confidence            9999999 899999998765  69999999999999999999999999999999999999532                 


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                             ..++.++|+|||.+.......   ....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus       147 -------~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~  219 (444)
T 3soa_A          147 -------LKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH  219 (444)
T ss_dssp             -------STTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             -------CCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH
Confidence                   245679999999987654433   2357999999999999989999999999999999999999999988777


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.......+..                                             .++..++++.+||.+||+.
T Consensus       220 ~~~~~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~~li~~~L~~  254 (444)
T 3soa_A          220 RLYQQIKAGAYDFPSP---------------------------------------------EWDTVTPEAKDLINKMLTI  254 (444)
T ss_dssp             HHHHHHHHTCCCCCTT---------------------------------------------TTTTSCHHHHHHHHHHSCS
T ss_pred             HHHHHHHhCCCCCCcc---------------------------------------------ccccCCHHHHHHHHHHcCC
Confidence            7666665544333321                                             1234678899999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~  374 (379)
                      ||++|||++|+|+||||+.
T Consensus       255 dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          255 NPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             STTTSCCHHHHHHSCTTHH
T ss_pred             ChhHCCCHHHHhcCccccC
Confidence            9999999999999999964

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.6e-48  Score=357.16  Aligned_cols=279  Identities=29%  Similarity=0.461  Sum_probs=217.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.+.||+|+||.||+|++ .+++.||+|++....   .....+.+|+.++..+     .|+|++++++++...+..+
T Consensus         3 ~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~   76 (288)
T 1ob3_A            3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKEL-----KHSNIVKLYDVIHTKKRLV   76 (288)
T ss_dssp             SEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-----CCTTBCCEEEEEECSSCEE
T ss_pred             cchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhc-----CCCCEeeeeeEEccCCeEE
Confidence            588999999999999999998 678999999986432   2235566788888777     6899999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +||||+.++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||++                      
T Consensus        77 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~----------------------  133 (288)
T 1ob3_A           77 LVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI----------------------  133 (288)
T ss_dssp             EEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----------------------
T ss_pred             EEEEecCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----------------------
Confidence            999999779999998753 358999999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                           +.++.++|+|||.+.......   ....||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+
T Consensus       134 -----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  208 (288)
T 1ob3_A          134 -----NREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD  208 (288)
T ss_dssp             -----CTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             -----cCCCCEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                 556678888888876543221   334689999999999764 58999999999999999999999999988888


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.+..+.++...|+.+....... .  ......            ..+     ........+.++.+||.+||+.|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~------------~~~-----~~~~~~~~~~~~~~li~~~L~~d  268 (288)
T 1ob3_A          209 QLMRIFRILGTPNSKNWPNVTELPKYD-P--NFTVYE------------PLP-----WESFLKGLDESGIDLLSKMLKLD  268 (288)
T ss_dssp             HHHHHHHHHCCCCTTTSTTGGGSTTCC-T--TCCCCC------------CCC-----GGGTCCSCCHHHHHHHHHHTCSS
T ss_pred             HHHHHHHHHCCCChhhchhhhcccccc-c--cccccc------------Ccc-----HHHHhhhcCHHHHHHHHHHcCCC
Confidence            877777777766655444322211100 0  000000            000     01122356788999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~~  376 (379)
                      |++|||++|+++||||++.+
T Consensus       269 P~~Rpt~~e~l~hp~f~~~n  288 (288)
T 1ob3_A          269 PNQRITAKQALEHAYFKENN  288 (288)
T ss_dssp             TTTSCCHHHHHTSGGGGC--
T ss_pred             cccCCCHHHHhcCcchhhcC
Confidence            99999999999999998764

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1.7e-48  Score=365.57  Aligned_cols=255  Identities=25%  Similarity=0.387  Sum_probs=213.0

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      .....|++.+.||+|+||.||+|+++.+|+.||+|+++..    .........|..++..+    ..|++++++++++.+
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~----~~hp~iv~l~~~~~~   89 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA----WEHPFLTHMFCTFQT   89 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHH----TTCTTBCCEEEEEEC
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhc----CCCCCCCcEEEEEEe
Confidence            4456788999999999999999999999999999999743    22344556677777765    367999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+..|+||||+ |++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++                
T Consensus        90 ~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----------------  151 (345)
T 1xjd_A           90 KENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL----------------  151 (345)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----------------
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEE----------------
Confidence            99999999999 999999998754  69999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                 +.++.++|+|||.+.....   .....+||+.|+|||++.+..++.++|+|||||++|+|++|..||.+
T Consensus       152 -----------~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  220 (345)
T 1xjd_A          152 -----------DKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG  220 (345)
T ss_dssp             -----------CTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -----------CCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC
Confidence                       5556778888887764322   22446799999999999999999999999999999999999999998


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .+..+....+.......|                                                 ...+.++.+||.+
T Consensus       221 ~~~~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~  251 (345)
T 1xjd_A          221 QDEEELFHSIRMDNPFYP-------------------------------------------------RWLEKEAKDLLVK  251 (345)
T ss_dssp             SSHHHHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHhCCCCCC-------------------------------------------------cccCHHHHHHHHH
Confidence            777666555443221111                                                 1256789999999


Q ss_pred             ccccCCCCCcCHH-HHhcCCCCCCCC
Q 017021          352 LLRYDPTDRLTAR-EALRHPFFTRDH  376 (379)
Q Consensus       352 ~L~~dP~~Rpta~-e~l~hp~f~~~~  376 (379)
                      ||+.||++||++. |+++||||++.+
T Consensus       252 lL~~dp~~R~~~~~~i~~hp~f~~~~  277 (345)
T 1xjd_A          252 LFVREPEKRLGVRGDIRQHPLFREIN  277 (345)
T ss_dssp             HSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred             HhcCCHhHcCCChHHHHcCccccCCC
Confidence            9999999999998 999999998754

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=2e-48  Score=366.15  Aligned_cols=254  Identities=26%  Similarity=0.404  Sum_probs=217.7

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      .....|++.+.||+|+||.||+|+++.+|+.||+|+++...    .......+|+.++..+     .|++++++++++.+
T Consensus        38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~  112 (350)
T 1rdq_E           38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKD  112 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-----CCTTBCCEEEEEEC
T ss_pred             CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEEc
Confidence            34457889999999999999999999999999999997432    2334566777777766     78999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+..|+||||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++                
T Consensus       113 ~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----------------  174 (350)
T 1rdq_E          113 NSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI----------------  174 (350)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----------------
T ss_pred             CCEEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEE----------------
Confidence            99999999999 899999998765  59999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                                 +.++.++|+|||.+...........||+.|+|||++.+..++.++|||||||++|+|++|..||...+.
T Consensus       175 -----------~~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  243 (350)
T 1rdq_E          175 -----------DQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP  243 (350)
T ss_dssp             -----------CTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             -----------CCCCCEEEcccccceeccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH
Confidence                       566678889999887666655667899999999999999999999999999999999999999998776


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .+....+.......|                                                 ...+.++.++|.+||+
T Consensus       244 ~~~~~~i~~~~~~~p-------------------------------------------------~~~~~~~~~li~~lL~  274 (350)
T 1rdq_E          244 IQIYEKIVSGKVRFP-------------------------------------------------SHFSSDLKDLLRNLLQ  274 (350)
T ss_dssp             HHHHHHHHHCCCCCC-------------------------------------------------TTCCHHHHHHHHHHSC
T ss_pred             HHHHHHHHcCCCCCC-------------------------------------------------CCCCHHHHHHHHHHhh
Confidence            665555444222221                                                 1356789999999999


Q ss_pred             cCCCCCcC-----HHHHhcCCCCCCCC
Q 017021          355 YDPTDRLT-----AREALRHPFFTRDH  376 (379)
Q Consensus       355 ~dP~~Rpt-----a~e~l~hp~f~~~~  376 (379)
                      .||.+||+     ++|+++||||+..+
T Consensus       275 ~dp~~R~~~~~~~~~ei~~h~~f~~~~  301 (350)
T 1rdq_E          275 VDLTKRFGNLKNGVNDIKNHKWFATTD  301 (350)
T ss_dssp             SCTTTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred             cCHHhccCCccCCHHHHHhCcCcCCCC
Confidence            99999998     99999999998753

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=3.6e-48  Score=377.58  Aligned_cols=308  Identities=26%  Similarity=0.425  Sum_probs=211.5

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee----
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----  115 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~----  115 (379)
                      ..|++.+.||+|+||.||+|+++.+++.||||++...   ......+.+|+.++..+     .|+||+++++++..    
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~~~  127 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-----NHDHVVKVLDIVIPKDVE  127 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCEEEECCCSCTT
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC-----CCCCCCceEEEEecCCcc
Confidence            4689999999999999999999999999999998642   23345677899999888     78999999999843    


Q ss_pred             -cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 -RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 -~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                       ...+|+||||++++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..
T Consensus       128 ~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  205 (458)
T 3rp9_A          128 KFDELYVVLEIADSDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLART  205 (458)
T ss_dssp             TCCCEEEEECCCSEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred             cCceEEEEEeccccchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchh
Confidence             36799999999999999998754  699999999999999999999999999999999999998888888888887765


Q ss_pred             CCCCCccc---ccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhh-hCCCCCCccchHhHHHHHHHHHh------
Q 017021          195 TPKDSSYF---KRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVI-LGLGWTYPCDIWSVGCILVELCT------  264 (379)
Q Consensus       195 ~~~~~~~~---~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwSlG~il~~l~~------  264 (379)
                      ........   ..........+++|+............+||+.|+|||++ .+..++.++|||||||++|+|++      
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~  285 (458)
T 3rp9_A          206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV  285 (458)
T ss_dssp             TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTC
T ss_pred             ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccc
Confidence            43221110   000111223344444333323333456789999999986 45669999999999999999998      


Q ss_pred             -----CCCCCCCCc--------------------hHHHHHHHHHHcCCCChhHHHhhhhhh-hhhhccCCCCCCCCCCch
Q 017021          265 -----GEALFQTHE--------------------NLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEGAASR  318 (379)
Q Consensus       265 -----g~~pf~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  318 (379)
                           |+++|.+.+                    ..+....+.+..|.++.+.+..+.... ..+... ......     
T Consensus       286 ~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~-~~~~~~-----  359 (458)
T 3rp9_A          286 AYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRI-FPKREG-----  359 (458)
T ss_dssp             SSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTT-SCCCCC-----
T ss_pred             cccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHh-cCCCCC-----
Confidence                 677776543                    245667777888888888776654322 222111 000000     


Q ss_pred             hhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          319 ESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                                   ..........++++.+||++||+.||++|||++|+|+||||++.+
T Consensus       360 -------------~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~  404 (458)
T 3rp9_A          360 -------------TDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR  404 (458)
T ss_dssp             -------------CCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             -------------CCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence                         001122334678899999999999999999999999999998754

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=1.7e-48  Score=363.73  Aligned_cols=292  Identities=26%  Similarity=0.428  Sum_probs=222.3

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      .......|++.++||+|+||.||+|++..+++.||+|+++...   .....+.+|+.++..+     .|+|++++++++.
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~  103 (329)
T 3gbz_A           29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-----QHRNIIELKSVIH  103 (329)
T ss_dssp             ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGC-----CCTTBCCEEEEEE
T ss_pred             cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHc-----CCCCcceEEEEEe
Confidence            3344557899999999999999999999999999999996432   2234556788888777     7899999999999


Q ss_pred             ecceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          115 YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       115 ~~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      +++..++||||+.++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++..++.           
T Consensus       104 ~~~~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~-----------  170 (329)
T 3gbz_A          104 HNHRLHLIFEYAENDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDA-----------  170 (329)
T ss_dssp             ETTEEEEEEECCSEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC--------------
T ss_pred             cCCEEEEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCC-----------
Confidence            999999999999889999998865  5999999999999999999999999999999999999964321           


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                                 +....++|+|||.+......   .....||+.|+|||++.+. .++.++|||||||++|+|++|..||.
T Consensus       171 -----------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~  239 (329)
T 3gbz_A          171 -----------SETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFP  239 (329)
T ss_dssp             -------------CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             -----------CccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence                       34456999999988754432   2335689999999999874 48999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      +.+..+....+.+..+.++...++..........     .++..              .............+.++.+||.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--------------~~~~~~~~~~~~~~~~~~~li~  300 (329)
T 3gbz_A          240 GDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQ-----SFPKF--------------RGKTLKRVLGALLDDEGLDLLT  300 (329)
T ss_dssp             CSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT-----TCCCC--------------CCCCHHHHHGGGSCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhh-----hhhhh--------------ccccHhhhcccccCHHHHHHHH
Confidence            9888888888888777766554443222111100     00000              0001111223346788999999


Q ss_pred             hccccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          351 GLLRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      +||+.||.+|||++|+|+||||++...
T Consensus       301 ~~L~~dP~~R~t~~e~l~hp~f~~~~~  327 (329)
T 3gbz_A          301 AMLEMDPVKRISAKNALEHPYFSHNDF  327 (329)
T ss_dssp             HHTCSSGGGSCCHHHHHTSGGGSSSCS
T ss_pred             HHccCChhhCCCHHHHhCCcccCCCCC
Confidence            999999999999999999999998753

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.8e-49  Score=366.73  Aligned_cols=282  Identities=27%  Similarity=0.461  Sum_probs=220.8

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .|++.++||+|+||.||+|+++.+++.||+|++.....  ....+.+|+.++..+     .|+|++++++++..++..++
T Consensus         3 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~l   77 (324)
T 3mtl_A            3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-----KHANIVTLHDIIHTEKSLTL   77 (324)
T ss_dssp             SEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCC-----CCTTBCCEEEEEECSSCEEE
T ss_pred             ceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhc-----CCCCCCeeeeEEeeCCEEEE
Confidence            58899999999999999999999999999999974322  122344688887777     68999999999999999999


Q ss_pred             EEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          122 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      ||||++++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||++                       
T Consensus        78 v~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~-----------------------  133 (324)
T 3mtl_A           78 VFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI-----------------------  133 (324)
T ss_dssp             EEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEE-----------------------
T ss_pred             EecccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEE-----------------------
Confidence            99999889999998754 368999999999999999999999999999999999999                       


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                          +.++.++|+|||.+.......   ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus       134 ----~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~  209 (324)
T 3mtl_A          134 ----NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ  209 (324)
T ss_dssp             ----CTTCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ----CCCCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                455678888888876443322   23468999999999876 5689999999999999999999999999998888


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.+..+.++...|+...........    .++.               .............++++.+||.+||+.||
T Consensus       210 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---------------~~~~~~~~~~~~~~~~~~~li~~~L~~dP  270 (324)
T 3mtl_A          210 LHFIFRILGTPTEETWPGILSNEEFKTY----NYPK---------------YRAEALLSHAPRLDSDGADLLTKLLQFEG  270 (324)
T ss_dssp             HHHHHHHHCCCCTTTSTTGGGCHHHHHT----CCCC---------------CCCCCHHHHCTTSCHHHHHHHHHHSCSSG
T ss_pred             HHHHHHHhCCCChHhchhhhcchhhccc----cccc---------------ccchhhhhhcCCCCHHHHHHHHHHcCcCc
Confidence            8888888888776655543222111100    0110               00011122334577889999999999999


Q ss_pred             CCCcCHHHHhcCCCCCCCCc
Q 017021          358 TDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f~~~~~  377 (379)
                      .+|||++|+|+||||.+...
T Consensus       271 ~~R~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          271 RNRISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             GGSCCHHHHTTSGGGGGGCS
T ss_pred             ccCCCHHHHhcChhhhhccc
Confidence            99999999999999987643

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=2e-48  Score=368.53  Aligned_cols=279  Identities=26%  Similarity=0.470  Sum_probs=211.4

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec---
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---  116 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~---  116 (379)
                      ..|++.+.||+|+||.||+|.+..+|+.||+|++...   ......+.+|+.++..+     .|+|++.+++++...   
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~~~~~~~  103 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-----KHENVIGLLDVFTPARSL  103 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCCSEEECSCSSG
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEecCCcc
Confidence            5689999999999999999999999999999998642   23345667899988888     689999999988654   


Q ss_pred             ---ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          117 ---NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       117 ---~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                         ...|+|+|+++++|.+++...   .+++..+..++.||+.||.|||+.||+||||||+||++               
T Consensus       104 ~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---------------  165 (367)
T 2fst_X          104 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---------------  165 (367)
T ss_dssp             GGCCCCEEEEECCCEECC-----C---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---------------
T ss_pred             ccCCeEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEE---------------
Confidence               568999999999999998763   59999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                  +.++.++|+|||.+...........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.
T Consensus       166 ------------~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  233 (367)
T 2fst_X          166 ------------NEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT  233 (367)
T ss_dssp             ------------CTTCCEEECC---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ------------CCCCCEEEeeccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                        55667888888888765555555689999999999877 67899999999999999999999999999


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhh-hhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      +..+....+.+..+.++.+.++.+.... ..+... ....+.                  ..........++.+.+||.+
T Consensus       234 ~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~-~~~~~~------------------~~~~~~~~~~~~~~~dLl~~  294 (367)
T 2fst_X          234 DHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPK------------------MNFANVFIGANPLAVDLLEK  294 (367)
T ss_dssp             SHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHT-SCCCCC------------------CCHHHHTTTCCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhc-cCCCCC------------------CCHHHHCCCCCHHHHHHHHH
Confidence            9989999999999998888776653322 222221 111110                  00112223567889999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||+.||++|||++|+|+||||++-
T Consensus       295 mL~~dP~~R~t~~e~L~hp~~~~~  318 (367)
T 2fst_X          295 MLVLDSDKRITAAQALAHAYFAQY  318 (367)
T ss_dssp             HSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             hCCCCcccCcCHHHHhcChhhhhc
Confidence            999999999999999999999864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=4.9e-48  Score=363.61  Aligned_cols=256  Identities=23%  Similarity=0.331  Sum_probs=210.7

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      ......|++.+.||+|+||.||+|+++.+++.||+|+++...    ........|..++..+    ..|++++.+++++.
T Consensus        16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~----~~hp~iv~l~~~~~   91 (353)
T 2i0e_A           16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP----GKPPFLTQLHSCFQ   91 (353)
T ss_dssp             ---CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCT----TCCTTBCCEEEEEE
T ss_pred             CCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhc----CCCCEEeeEEEEEE
Confidence            345567899999999999999999999999999999997532    2233445565555443    36799999999999


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      +.+..|+||||+ |++|.+++...+  .+++..++.++.||+.||.|||+.||+||||||+||++               
T Consensus        92 ~~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---------------  154 (353)
T 2i0e_A           92 TMDRLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---------------  154 (353)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---------------
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---------------
Confidence            999999999999 899999998754  69999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                                  +.++.++|+|||++.....   .....+||+.|+|||++.+..++.++|+|||||++|+|++|+.||.
T Consensus       155 ------------~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~  222 (353)
T 2i0e_A          155 ------------DSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE  222 (353)
T ss_dssp             ------------CTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ------------cCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCC
Confidence                        5556788888887764322   2244679999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      +.+..+....+.......|                                                 ...+.++.+||.
T Consensus       223 ~~~~~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~  253 (353)
T 2i0e_A          223 GEDEDELFQSIMEHNVAYP-------------------------------------------------KSMSKEAVAICK  253 (353)
T ss_dssp             CSSHHHHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHH
T ss_pred             CCCHHHHHHHHHhCCCCCC-------------------------------------------------CCCCHHHHHHHH
Confidence            8777666655544222222                                                 135678999999


Q ss_pred             hccccCCCCCc-----CHHHHhcCCCCCCCC
Q 017021          351 GLLRYDPTDRL-----TAREALRHPFFTRDH  376 (379)
Q Consensus       351 ~~L~~dP~~Rp-----ta~e~l~hp~f~~~~  376 (379)
                      +||+.||.+||     +++|+++||||+..+
T Consensus       254 ~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~  284 (353)
T 2i0e_A          254 GLMTKHPGKRLGCGPEGERDIKEHAFFRYID  284 (353)
T ss_dssp             HHTCSCTTSCTTCSTTHHHHHHTSGGGTTCC
T ss_pred             HHhhcCHHHcCCCCCCCHHHHhcCccccCCC
Confidence            99999999999     479999999998643

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=3.8e-48  Score=366.01  Aligned_cols=256  Identities=25%  Similarity=0.398  Sum_probs=216.7

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ..|++.+.||+|+||.||+|.++.+++.||+|++....   .....+.+|+.++..+     .|+||+++++++.+++..
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~~~~~~~~~~~~  103 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-----QHPNIVRLHDSIQEESFH  103 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEECSSEE
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEEeCCEE
Confidence            46899999999999999999999999999999997432   2335567899998888     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+.+....  .+++..+..++.||+.||.|||+.||+||||||+||+++..                 
T Consensus       104 ~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~-----------------  164 (362)
T 2bdw_A          104 YLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASK-----------------  164 (362)
T ss_dssp             EEEECCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCS-----------------
T ss_pred             EEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecC-----------------
Confidence            9999999 889999987654  68999999999999999999999999999999999999543                 


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                             ..+..++|+|||.+.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+
T Consensus       165 -------~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~  237 (362)
T 2bdw_A          165 -------AKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR  237 (362)
T ss_dssp             -------STTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             -------CCCCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence                   234568999999987655433  34579999999999999899999999999999999999999998877766


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.......+..                                             .++..++++.+||.+||+.|
T Consensus       238 ~~~~i~~~~~~~~~~---------------------------------------------~~~~~~~~~~~li~~~L~~d  272 (362)
T 2bdw_A          238 LYAQIKAGAYDYPSP---------------------------------------------EWDTVTPEAKSLIDSMLTVN  272 (362)
T ss_dssp             HHHHHHHTCCCCCTT---------------------------------------------GGGGSCHHHHHHHHHHSCSS
T ss_pred             HHHHHHhCCCCCCcc---------------------------------------------cccCCCHHHHHHHHHHcCCC
Confidence            665554433332211                                             12346788999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTR  374 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~  374 (379)
                      |++|||++|+|+||||..
T Consensus       273 P~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          273 PKKRITADQALKVPWICN  290 (362)
T ss_dssp             GGGSCCHHHHTTSHHHHT
T ss_pred             hhhCcCHHHHhcCcccCC
Confidence            999999999999999964

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1e-47  Score=366.16  Aligned_cols=265  Identities=20%  Similarity=0.364  Sum_probs=208.5

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      .+....|++.++||+|+||.||+|+++.+++.||+|+++...    ........|..++.++    ..|++|+++++++.
T Consensus        48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~----~~hp~Iv~l~~~~~  123 (396)
T 4dc2_A           48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQA----SNHPFLVGLHSCFQ  123 (396)
T ss_dssp             -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHH----TTCTTBCCEEEEEE
T ss_pred             CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhc----CCCCCcCeeEEEEE
Confidence            345567899999999999999999999999999999997432    2234456788887776    36799999999999


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      +.+.+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+|||+               
T Consensus       124 ~~~~~~lV~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---------------  186 (396)
T 4dc2_A          124 TESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---------------  186 (396)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---------------
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---------------
Confidence            999999999999 899999998764  69999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                                  +.++.++|+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus       187 ------------~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~  254 (396)
T 4dc2_A          187 ------------DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD  254 (396)
T ss_dssp             ------------CTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSST
T ss_pred             ------------CCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCc
Confidence                        5566788888888764222   2245689999999999999999999999999999999999999997


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      .....+...              ..........+..+...+|                          ...+.++.+||+
T Consensus       255 ~~~~~~~~~--------------~~~~~~~~~~i~~~~~~~p--------------------------~~~s~~~~~li~  294 (396)
T 4dc2_A          255 IVGSSDNPD--------------QNTEDYLFQVILEKQIRIP--------------------------RSLSVKAASVLK  294 (396)
T ss_dssp             TTTC--------------------CCHHHHHHHHHHCCCCCC--------------------------TTSCHHHHHHHH
T ss_pred             ccccccccc--------------hhhHHHHHHHHhccccCCC--------------------------CcCCHHHHHHHH
Confidence            532211000              0000000011111111121                          236778999999


Q ss_pred             hccccCCCCCcCH------HHHhcCCCCCCCC
Q 017021          351 GLLRYDPTDRLTA------REALRHPFFTRDH  376 (379)
Q Consensus       351 ~~L~~dP~~Rpta------~e~l~hp~f~~~~  376 (379)
                      +||+.||.+||++      +|+++||||++.+
T Consensus       295 ~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~  326 (396)
T 4dc2_A          295 SFLNKDPKERLGCHPQTGFADIQGHPFFRNVD  326 (396)
T ss_dssp             HHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCC
T ss_pred             HHhcCCHhHcCCCCCCCCHHHHhcCccccCCC
Confidence            9999999999985      8999999998754

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=1.9e-47  Score=362.40  Aligned_cols=310  Identities=32%  Similarity=0.525  Sum_probs=237.4

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCC------CCCeeEEecc
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK------GGNRCVQIRN  111 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~------~~~~i~~~~~  111 (379)
                      ..+....|++.+.||+|+||.||+|++..+++.||+|++............|+.++.++.+...      .|+|++++++
T Consensus        14 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~   93 (373)
T 1q8y_A           14 EPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD   93 (373)
T ss_dssp             CEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred             CcccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence            3456678999999999999999999999999999999998666566777889999998865321      2678999999


Q ss_pred             eeeecc----eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEeccccccc
Q 017021          112 WFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKV  186 (379)
Q Consensus       112 ~~~~~~----~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~iiH~dlkp~Nili~~~~~~~~  186 (379)
                      ++...+    ..++|||+++++|.+++.......+++..+..++.||+.||.|||+. ||+||||||+||++...+..  
T Consensus        94 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~--  171 (373)
T 1q8y_A           94 HFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSP--  171 (373)
T ss_dssp             EEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETT--
T ss_pred             HhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCC--
Confidence            988654    89999999999999999886555699999999999999999999998 99999999999999643210  


Q ss_pred             CCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCC
Q 017021          187 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~  266 (379)
                                         +....++|+|||.+...........||+.|+|||++.+..++.++|||||||++|+|++|.
T Consensus       172 -------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~  232 (373)
T 1q8y_A          172 -------------------ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGD  232 (373)
T ss_dssp             -------------------TTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             -------------------cCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCC
Confidence                               2345689999999987666556668999999999999999999999999999999999999


Q ss_pred             CCCCCCc------hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc
Q 017021          267 ALFQTHE------NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  340 (379)
Q Consensus       267 ~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (379)
                      .||...+      ..+....+.+..+.+|..++.........+...+............ .      .............
T Consensus       233 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~  305 (373)
T 1q8y_A          233 FLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWP-L------EDVLTEKYKFSKD  305 (373)
T ss_dssp             CCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCC-H------HHHHHHTTCCCHH
T ss_pred             CCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccc-h------hhhhhhcccCCcc
Confidence            9998654      4556677778889999887765443322222222111111000000 0      0000000112234


Q ss_pred             chhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       341 ~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      .+.++.+||.+||+.||++|||++|+|+||||++.
T Consensus       306 ~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  340 (373)
T 1q8y_A          306 EAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  340 (373)
T ss_dssp             HHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             hHHHHHHHHHHHhccCccccCCHHHHhhChhhhcc
Confidence            56789999999999999999999999999999975

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=2.6e-47  Score=357.93  Aligned_cols=264  Identities=20%  Similarity=0.367  Sum_probs=206.9

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      +....|++.+.||+|+||.||+|+++.+++.||+|+++...    ........|..++..+    ..|++|+++++++.+
T Consensus         6 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~----~~hp~iv~l~~~~~~   81 (345)
T 3a8x_A            6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA----SNHPFLVGLHSCFQT   81 (345)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHT----TTCTTBCCEEEEEEC
T ss_pred             CchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhc----CCCCccCeEEEEEEe
Confidence            34557899999999999999999999999999999997432    2234455677777665    367999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+..|+||||+ +++|.+++....  .+++..++.++.||+.||.|||+.||+||||||+||++                
T Consensus        82 ~~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----------------  143 (345)
T 3a8x_A           82 ESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL----------------  143 (345)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----------------
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE----------------
Confidence            99999999999 899999998754  69999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                 +.++.++|+|||.+.....   .....+||+.|+|||++.+..++.++|+|||||++|+|++|+.||..
T Consensus       144 -----------~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  212 (345)
T 3a8x_A          144 -----------DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  212 (345)
T ss_dssp             -----------CTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             -----------CCCCCEEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence                       5566788888888764222   22345799999999999999999999999999999999999999975


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      ........              ..........+..+...+|                          ...+.++.+||.+
T Consensus       213 ~~~~~~~~--------------~~~~~~~~~~i~~~~~~~p--------------------------~~~s~~~~~li~~  252 (345)
T 3a8x_A          213 VGSSDNPD--------------QNTEDYLFQVILEKQIRIP--------------------------RSLSVKAASVLKS  252 (345)
T ss_dssp             TTC---------------------CHHHHHHHHHHCCCCCC--------------------------TTSCHHHHHHHHH
T ss_pred             cccccccc--------------cccHHHHHHHHHcCCCCCC--------------------------CCCCHHHHHHHHH
Confidence            32111000              0000000001111111111                          2366789999999


Q ss_pred             ccccCCCCCcCH------HHHhcCCCCCCCC
Q 017021          352 LLRYDPTDRLTA------REALRHPFFTRDH  376 (379)
Q Consensus       352 ~L~~dP~~Rpta------~e~l~hp~f~~~~  376 (379)
                      ||+.||.+||++      +|+++||||+..+
T Consensus       253 lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~  283 (345)
T 3a8x_A          253 FLNKDPKERLGCHPQTGFADIQGHPFFRNVD  283 (345)
T ss_dssp             HTCSSTTTSTTCCTTTHHHHHHTSGGGTTCC
T ss_pred             HhcCCHhHCCCCCCcCCHHHHhcCCccCCCC
Confidence            999999999996      8999999998753

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=3.1e-47  Score=358.00  Aligned_cols=321  Identities=44%  Similarity=0.821  Sum_probs=246.0

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCC-ceEEEEEeeccchhhHhHHHHHHHHHHHHhcCC-CCCeeEEecceeeecceE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK-GGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~-~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~-~~~~i~~~~~~~~~~~~~  119 (379)
                      ...|++.+.||+|+||.||+|.+..++ +.||+|+++........+..|+.++..+.+... .+.+++.+.+++...+..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~   97 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM   97 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence            357899999999999999999998776 789999998666667778889999999876542 334588889999999999


Q ss_pred             EEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       120 ~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      |+||||+++++.+.+.......+++..+..++.||+.||.|||+.||+||||||+||++...+...+.+..        .
T Consensus        98 ~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~--------~  169 (355)
T 2eu9_A           98 CIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEH--------K  169 (355)
T ss_dssp             EEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC---------
T ss_pred             EEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccc--------c
Confidence            99999998888888877655579999999999999999999999999999999999999654322221111        0


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  279 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~  279 (379)
                      ...........++|+|||.+...........||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+...
T Consensus       170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  249 (355)
T 2eu9_A          170 SCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV  249 (355)
T ss_dssp             CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             cccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            00111245678999999999876666666789999999999999899999999999999999999999999988888888


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                      .+.+..++.|..++.......  +...+...|+.................   .........+..+.+||.+||+.||++
T Consensus       250 ~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~L~~dP~~  324 (355)
T 2eu9_A          250 MMEKILGPIPSHMIHRTRKQK--YFYKGGLVWDENSSDGRYVKENCKPLK---SYMLQDSLEHVQLFDLMRRMLEFDPAQ  324 (355)
T ss_dssp             HHHHHHCCCCHHHHHHCSCGG--GEETTEECCCTTSHHHHHHHHHCCCGG---GGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred             HHHHHcCCCcHHHhhhccchh--hhcccccccccccchhccccccCCccc---ccccccchhHHHHHHHHHHHhcCChhh
Confidence            899999999998877643221  222222333332211111111110000   000011234568999999999999999


Q ss_pred             CcCHHHHhcCCCCCCC
Q 017021          360 RLTAREALRHPFFTRD  375 (379)
Q Consensus       360 Rpta~e~l~hp~f~~~  375 (379)
                      |||++|+++||||++.
T Consensus       325 Rpt~~e~l~hp~f~~~  340 (355)
T 2eu9_A          325 RITLAEALLHPFFAGL  340 (355)
T ss_dssp             SCCHHHHTTSGGGGGC
T ss_pred             CcCHHHHhcChhhcCC
Confidence            9999999999999864

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=2.5e-47  Score=368.85  Aligned_cols=299  Identities=27%  Similarity=0.406  Sum_probs=215.8

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec---
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---  116 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~---  116 (379)
                      ..|++.+.||+|+||.||+|+++.+++.||+|++...   ......+.+|+.++..+     .|+||+.+++++...   
T Consensus        26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~nIv~l~~~~~~~~~~  100 (432)
T 3n9x_A           26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-----KSDYIIRLYDLIIPDDLL  100 (432)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC-----CCTTBCCEEEECCCSCTT
T ss_pred             CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc-----CCCCcceEEEEEecCCCC
Confidence            4689999999999999999999999999999999742   23345677899999888     679999999998766   


Q ss_pred             --ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          117 --NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       117 --~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                        ...|+||||++++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||+++.++.+|++|||++..
T Consensus       101 ~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~  178 (432)
T 3n9x_A          101 KFDELYIVLEIADSDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLART  178 (432)
T ss_dssp             TCCCEEEEEECCSEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             cCCeEEEEEecCCcCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence              5799999999889999998754  699999999999999999999999999999999999996555555555554432


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcc-------cccCCCCCcccccCCccchhhh-hCCCCCCccchHhHHHHHHHHHhC-
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGST-------TYERPDQNYIVSTRHYRAPEVI-LGLGWTYPCDIWSVGCILVELCTG-  265 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~-------~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwSlG~il~~l~~g-  265 (379)
                      ........         ...+....       ..........+||+.|+|||++ .+..++.++|||||||++|+|++| 
T Consensus       179 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~  249 (432)
T 3n9x_A          179 INSEKDTN---------IVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNML  249 (432)
T ss_dssp             C----------------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTC
T ss_pred             cccccccc---------ccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcc
Confidence            21111000         00000000       0000011345789999999986 456699999999999999999984 


Q ss_pred             ----------CCCCCCCc-----------------hHHHHHHHHHHcCCCChhHHHhhhh-hhhhhhccCCCCCCCCCCc
Q 017021          266 ----------EALFQTHE-----------------NLEHLAMMERVLGPLPQHMLKRVDR-HAEKYVRRGRLDWPEGAAS  317 (379)
Q Consensus       266 ----------~~pf~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  317 (379)
                                .++|.+.+                 ..+....+.+..|.++.+.+..+.. .+..++.......+     
T Consensus       250 ~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~-----  324 (432)
T 3n9x_A          250 QSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKP-----  324 (432)
T ss_dssp             TTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCC-----
T ss_pred             cccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCC-----
Confidence                      44444432                 3556677788889988887765432 22222221110000     


Q ss_pred             hhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          318 RESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                                    ..........++++.+||.+||+.||++|||++|+|+||||++.+
T Consensus       325 --------------~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  369 (432)
T 3n9x_A          325 --------------INLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVR  369 (432)
T ss_dssp             --------------CCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTC
T ss_pred             --------------CCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhcc
Confidence                          001122345778999999999999999999999999999998754

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.8e-47  Score=352.42  Aligned_cols=281  Identities=31%  Similarity=0.535  Sum_probs=220.0

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.++||+|+||.||+|.+..+|+.||+|++....   .....+.+|+.++..+     .|+|++++++++...+..+
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~   78 (311)
T 4agu_A            4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-----KHPNLVNLLEVFRRKRRLH   78 (311)
T ss_dssp             CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETTEEE
T ss_pred             cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhC-----CCCCccchhheeecCCeEE
Confidence            5889999999999999999999999999999986432   2245566788888888     6899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||++                     
T Consensus        79 lv~e~~~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~---------------------  135 (311)
T 4agu_A           79 LVFEYCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI---------------------  135 (311)
T ss_dssp             EEEECCSEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---------------------
T ss_pred             EEEEeCCCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEE---------------------
Confidence            999999 777888776554  68999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                            +.++.++|+|||.+.......   ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..
T Consensus       136 ------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~  209 (311)
T 4agu_A          136 ------TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV  209 (311)
T ss_dssp             ------CTTSCEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             ------cCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence                  556678888888886544322   33478999999999976 56899999999999999999999999998888


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.+..+..++..........  +......+.+...                ..........+..+.+||.+||+.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~li~~~L~~  271 (311)
T 4agu_A          210 DQLYLIRKTLGDLIPRHQQVFSTNQ--YFSGVKIPDPEDM----------------EPLELKFPNISYPALGLLKGCLHM  271 (311)
T ss_dssp             HHHHHHHHHHCSCCHHHHHHHHTCG--GGTTCCCCCCSSC----------------CCHHHHCTTCCHHHHHHHHHHCCS
T ss_pred             HHHHHHHHHhccccccccccccccc--ccccCcCCCcccc----------------chhhhhcccccHHHHHHHHHHccC
Confidence            8888888888877765544322211  1111111111110                011112235778899999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ||++|||++|+++||||++..
T Consensus       272 dP~~Rpt~~ell~hp~f~~~~  292 (311)
T 4agu_A          272 DPTERLTCEQLLHHPYFENIR  292 (311)
T ss_dssp             STTTSCCHHHHHTSGGGTTCC
T ss_pred             ChhhcCCHHHHhcChHHHhcc
Confidence            999999999999999998753

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=1.7e-47  Score=362.86  Aligned_cols=278  Identities=27%  Similarity=0.480  Sum_probs=223.7

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ..|++.+.||+|+||.||+|.++.+|+.||+|++...   ......+.+|+.++..+     .|+|++.+++++...+..
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~  116 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-----QHENVIGLLDVFTPASSL  116 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCCSEEECSCSSS
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhc-----CCCCchhhhhheeccCCc
Confidence            4688999999999999999999999999999999742   23345667888888888     689999999999877654


Q ss_pred             ------EEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          120 ------CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       120 ------~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                            |+||||++++|.+.+..    .+++..+..++.||+.||.|||+.||+||||||+||++               
T Consensus       117 ~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll---------------  177 (371)
T 4exu_A          117 RNFYDFYLVMPFMQTDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---------------  177 (371)
T ss_dssp             TTCCCCEEEEECCCEEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---------------
T ss_pred             ccceeEEEEEccccccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEE---------------
Confidence                  99999998888887743    48999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                  +.++.++|+|||.+...........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.
T Consensus       178 ------------~~~~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  245 (371)
T 4exu_A          178 ------------NEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK  245 (371)
T ss_dssp             ------------CTTCCEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ------------CCCCCEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence                        55667888999988776666666788999999999987 67899999999999999999999999999


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+....+.+..+.++.+++..+...............+                  ...........++.+.+||.+|
T Consensus       246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~li~~~  307 (371)
T 4exu_A          246 DYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP------------------RKDFTQLFPRASPQAADLLEKM  307 (371)
T ss_dssp             SHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCC------------------CCCHHHHSTTSCHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCc------------------chhHHHhccccChHHHHHHHHH
Confidence            9889999999999998888776654332211111000000                  0011223345788999999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      |+.||++|||++|+|+||||+.
T Consensus       308 L~~dP~~Rpt~~ell~hp~f~~  329 (371)
T 4exu_A          308 LELDVDKRLTAAQALTHPFFEP  329 (371)
T ss_dssp             SCSCTTTSCCHHHHHTSGGGTT
T ss_pred             CCCChhhcCCHHHHhcCccccc
Confidence            9999999999999999999985

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-47  Score=365.54  Aligned_cols=258  Identities=26%  Similarity=0.459  Sum_probs=216.2

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ..|++.+.||+|+||.||+|.++.+|+.||+|++.... .....+.+|+.++..+     .|+||+++++++.+....++
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~~~~~~~~~~~~~l  125 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-----HHPKLINLHDAFEDKYEMVL  125 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-----CSTTBCCEEEEEECSSEEEE
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhC-----CCcCCCeEEEEEEeCCEEEE
Confidence            36899999999999999999999999999999997532 2344567788888777     78999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      ||||+ +++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||+++.                    
T Consensus       126 v~E~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~--------------------  184 (387)
T 1kob_A          126 ILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET--------------------  184 (387)
T ss_dssp             EEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS--------------------
T ss_pred             EEEcCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEec--------------------
Confidence            99999 899999987643 35899999999999999999999999999999999999943                    


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  278 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~  278 (379)
                           ...+.++|+|||.+.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+..
T Consensus       185 -----~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~  259 (387)
T 1kob_A          185 -----KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL  259 (387)
T ss_dssp             -----TTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH
T ss_pred             -----CCCCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHH
Confidence                 234568999999987655443  2357899999999999989999999999999999999999999987776665


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCC
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  358 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  358 (379)
                      ..+.......+..                                             .+...++++.+||.+||+.||.
T Consensus       260 ~~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~~li~~~L~~dP~  294 (387)
T 1kob_A          260 QNVKRCDWEFDED---------------------------------------------AFSSVSPEAKDFIKNLLQKEPR  294 (387)
T ss_dssp             HHHHHCCCCCCSS---------------------------------------------TTTTSCHHHHHHHHTTSCSSGG
T ss_pred             HHHHhCCCCCCcc---------------------------------------------ccccCCHHHHHHHHHHcCCChh
Confidence            5544432222110                                             1124677899999999999999


Q ss_pred             CCcCHHHHhcCCCCCCCC
Q 017021          359 DRLTAREALRHPFFTRDH  376 (379)
Q Consensus       359 ~Rpta~e~l~hp~f~~~~  376 (379)
                      +|||++|+++||||+...
T Consensus       295 ~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          295 KRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             GSCCHHHHHTSTTTSSCC
T ss_pred             HCcCHHHHhhCccccCCc
Confidence            999999999999998753

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.1e-47  Score=367.70  Aligned_cols=257  Identities=23%  Similarity=0.393  Sum_probs=215.4

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      .......|++.++||+|+||.||+|+++.+++.||+|+++...    .....+..|..++..+     +|++|+++++++
T Consensus        64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-----~hp~Iv~l~~~~  138 (410)
T 3v8s_A           64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-----NSPWVVQLFYAF  138 (410)
T ss_dssp             HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-----CCTTBCCEEEEE
T ss_pred             cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-----CCCCCCeEEEEE
Confidence            3455667899999999999999999999999999999997421    2234466788888887     789999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      .+++.+|+||||+ |++|.+++...   .+++..+..++.||+.||.|||+.||+||||||+||++              
T Consensus       139 ~~~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl--------------  201 (410)
T 3v8s_A          139 QDDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL--------------  201 (410)
T ss_dssp             ECSSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE--------------
T ss_pred             EECCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeE--------------
Confidence            9999999999999 99999999775   48999999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCC----CCCccchHhHHHHHHHHHh
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlG~il~~l~~  264 (379)
                                   +.++.++|+|||.+.......    ...+||+.|+|||++.+..    ++.++|||||||++|+|++
T Consensus       202 -------------~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~  268 (410)
T 3v8s_A          202 -------------DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV  268 (410)
T ss_dssp             -------------CTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHH
T ss_pred             -------------CCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHh
Confidence                         556678888888876544432    3467999999999998765    7899999999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHHc--CCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccch
Q 017021          265 GEALFQTHENLEHLAMMERVL--GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  342 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (379)
                      |..||.+.+..+....+.+..  ...|.                                               ....+
T Consensus       269 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-----------------------------------------------~~~~s  301 (410)
T 3v8s_A          269 GDTPFYADSLVGTYSKIMNHKNSLTFPD-----------------------------------------------DNDIS  301 (410)
T ss_dssp             SSCTTCCSSHHHHHHHHHTHHHHCCCCT-----------------------------------------------TCCCC
T ss_pred             CCCCCCCCChhhHHHHHHhccccccCCC-----------------------------------------------ccccc
Confidence            999999877766665554321  11110                                               12467


Q ss_pred             hHHHHHHhhccccCCCC--CcCHHHHhcCCCCCCCC
Q 017021          343 GDLTHLLQGLLRYDPTD--RLTAREALRHPFFTRDH  376 (379)
Q Consensus       343 ~~~~~li~~~L~~dP~~--Rpta~e~l~hp~f~~~~  376 (379)
                      .++++||.+||+.+|.+  ||+++|+++||||++.+
T Consensus       302 ~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~  337 (410)
T 3v8s_A          302 KEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ  337 (410)
T ss_dssp             HHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSS
T ss_pred             HHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCC
Confidence            89999999999999999  99999999999998754

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.3e-47  Score=362.32  Aligned_cols=260  Identities=26%  Similarity=0.397  Sum_probs=202.3

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .....|++.++||+|+||.||+|+++.+++.||+|++...........+|+.++..+     .|+||+++++++.+.+..
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~   91 (361)
T 3uc3_A           17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL-----RHPNIVRFKEVILTPTHL   91 (361)
T ss_dssp             CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHC-----CCTTBCCEEEEEECSSEE
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhC-----CCCCCCcEEEEEeeCCEE
Confidence            345679999999999999999999999999999999986666667778899998888     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||+++.+                 
T Consensus        92 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~-----------------  152 (361)
T 3uc3_A           92 AIIMEYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGS-----------------  152 (361)
T ss_dssp             EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSS-----------------
T ss_pred             EEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC-----------------
Confidence            9999999 899999997754  69999999999999999999999999999999999999432                 


Q ss_pred             CcccccCCCCCCeEEeecCcccccCC--CCCcccccCCccchhhhhCCCCCCc-cchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERP--DQNYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                              ....++|+|||.+.....  ......||+.|+|||++.+..++.+ +|||||||++|+|++|+.||......
T Consensus       153 --------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  224 (361)
T 3uc3_A          153 --------PAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP  224 (361)
T ss_dssp             --------SSCCEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C
T ss_pred             --------CCceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH
Confidence                    233489999998863322  2244579999999999988887644 89999999999999999999864432


Q ss_pred             HHHH-HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          276 EHLA-MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       276 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .... .+.+....                    ....+.                        ....++.+.+||.+||+
T Consensus       225 ~~~~~~~~~~~~~--------------------~~~~~~------------------------~~~~s~~~~~li~~~L~  260 (361)
T 3uc3_A          225 RDYRKTIQRILSV--------------------KYSIPD------------------------DIRISPECCHLISRIFV  260 (361)
T ss_dssp             CCHHHHHHHHHTT--------------------CCCCCT------------------------TSCCCHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHhcC--------------------CCCCCC------------------------cCCCCHHHHHHHHHHcc
Confidence            1111 11111110                    011110                        11356789999999999


Q ss_pred             cCCCCCcCHHHHhcCCCCCCC
Q 017021          355 YDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      .||.+|||+.|+++||||...
T Consensus       261 ~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          261 ADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             SCTTTSCCHHHHHTSHHHHTT
T ss_pred             CChhHCcCHHHHHhCcchhcC
Confidence            999999999999999999543

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=8e-49  Score=366.55  Aligned_cols=250  Identities=26%  Similarity=0.391  Sum_probs=205.6

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      -.|++.+.||+|+||.||+|.+..+++.||+|++....    .....+.+|+.++..+     .|+||+++++++.+.+.
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~l~~~~~~~~~   83 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-----RHPHIIKLYDVITTPTD   83 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-----CCTTBCCEEEEEECSSE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-----CCCCCCeEEEEEEeCCE
Confidence            36889999999999999999999999999999997432    2234567788888777     78999999999999999


Q ss_pred             EEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          119 ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       119 ~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      .++||||++++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++                    
T Consensus        84 ~~lv~E~~~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll--------------------  141 (336)
T 3h4j_B           84 IVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL--------------------  141 (336)
T ss_dssp             EEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEE--------------------
T ss_pred             EEEEEECCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEE--------------------
Confidence            99999999999999987764  69999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCC-CCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                             +.++.++|+|||.+.......  ...+||+.|+|||++.+..+ +.++|||||||++|+|++|..||......
T Consensus       142 -------~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~  214 (336)
T 3h4j_B          142 -------DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP  214 (336)
T ss_dssp             -------CTTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST
T ss_pred             -------cCCCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH
Confidence                   556678888888876543332  34579999999999988776 68999999999999999999999753321


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +..                       ..+..+....                          .+..++.+.+||++||+.
T Consensus       215 ~~~-----------------------~~i~~~~~~~--------------------------p~~~s~~~~~li~~~L~~  245 (336)
T 3h4j_B          215 NLF-----------------------KKVNSCVYVM--------------------------PDFLSPGAQSLIRRMIVA  245 (336)
T ss_dssp             TCB-----------------------CCCCSSCCCC--------------------------CTTSCHHHHHHHHTTSCS
T ss_pred             HHH-----------------------HHHHcCCCCC--------------------------cccCCHHHHHHHHHHcCC
Confidence            100                       0011111111                          123567899999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||.+|||++|+++||||+..
T Consensus       246 dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          246 DPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             SGGGSCCHHHHTTCHHHHTT
T ss_pred             ChhHCcCHHHHHhChhhccC
Confidence            99999999999999999754

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=7.9e-47  Score=351.23  Aligned_cols=259  Identities=26%  Similarity=0.440  Sum_probs=216.3

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch-------hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      -.|++.+.||+|+||.||+|+++.+|+.||+|++.....       ....+.+|+.++..+     .|+|++++++++.+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~   86 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-----LHHNVITLHDVYEN   86 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-----CCTTBCCEEEEEEC
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-----CCCCcceEEEEEec
Confidence            468899999999999999999999999999999974321       245677899999888     68999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+..++||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||++..++            
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~------------  152 (321)
T 2a2a_A           87 RTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN------------  152 (321)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHTCS--CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTT------------
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCC------------
Confidence            99999999999 899999998754  689999999999999999999999999999999999995432            


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                 .....++|+|||.+.......  ....||+.|+|||.+.+..++.++|||||||++|+|++|..||.+.
T Consensus       153 -----------~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  221 (321)
T 2a2a_A          153 -----------IPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD  221 (321)
T ss_dssp             -----------SSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred             -----------CCcCCEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC
Confidence                       112268999999887544332  3457899999999999989999999999999999999999999887


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+....+.......+..                                             .....+..+.+||.+|
T Consensus       222 ~~~~~~~~i~~~~~~~~~~---------------------------------------------~~~~~~~~~~~li~~~  256 (321)
T 2a2a_A          222 TKQETLANITSVSYDFDEE---------------------------------------------FFSHTSELAKDFIRKL  256 (321)
T ss_dssp             SHHHHHHHHHTTCCCCCHH---------------------------------------------HHTTCCHHHHHHHHTT
T ss_pred             CHHHHHHHHHhcccccChh---------------------------------------------hhcccCHHHHHHHHHH
Confidence            7666555444433232221                                             1234677899999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      |+.||++|||++|+++||||+...
T Consensus       257 l~~dp~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          257 LVKETRKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             SCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred             cCCChhhCcCHHHHhcCccccCCC
Confidence            999999999999999999998643

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=2.9e-47  Score=363.58  Aligned_cols=306  Identities=17%  Similarity=0.209  Sum_probs=210.3

Q ss_pred             eeeeeechhhhhhhhccccc--cceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEe
Q 017021           35 ITYIVFSAFADKIHSKMGEG--TFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQI  109 (379)
Q Consensus        35 ~~~~~~~~~~y~i~~~Lg~G--~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~  109 (379)
                      .+.+....-.|++.++||+|  +||.||+|+++.+++.||+|++....   .....+.+|+.++..+     .|+||+++
T Consensus        17 ~s~~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~   91 (389)
T 3gni_B           17 MSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF-----NHPNIVPY   91 (389)
T ss_dssp             -CCCCCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-----CCTTBCCE
T ss_pred             hhcccCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhC-----CCCCCCcE
Confidence            34456677789999999999  99999999999999999999997432   3345566799988888     78999999


Q ss_pred             cceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCC
Q 017021          110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD  188 (379)
Q Consensus       110 ~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~  188 (379)
                      ++++.+++..|+||||+ +++|.+++.......+++..+..++.||+.||.|||+.||+||||||+||+++.++      
T Consensus        92 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~------  165 (389)
T 3gni_B           92 RATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG------  165 (389)
T ss_dssp             EEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC------
T ss_pred             eEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC------
Confidence            99999999999999999 89999999886545799999999999999999999999999999999999995544      


Q ss_pred             CccCCCCCCCCcccccCCCCCCeEEeecCccccc----------CCCCCcccccCCccchhhhhC--CCCCCccchHhHH
Q 017021          189 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE----------RPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVG  256 (379)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~----------~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG  256 (379)
                                           .++|+|||.+...          ........||+.|+|||++.+  ..++.++||||||
T Consensus       166 ---------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG  224 (389)
T 3gni_B          166 ---------------------KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG  224 (389)
T ss_dssp             ---------------------CEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHH
T ss_pred             ---------------------CEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHH
Confidence                                 4555555544221          111233478999999999987  5789999999999


Q ss_pred             HHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccc-hhhHHHHH
Q 017021          257 CILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL-PRLQNLIM  335 (379)
Q Consensus       257 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  335 (379)
                      |++|+|++|+.||.+.+..+....+..  +..+. ................... .......+........ ........
T Consensus       225 ~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  300 (389)
T 3gni_B          225 ITACELANGHVPFKDMPATQMLLEKLN--GTVPC-LLDTSTIPAEELTMSPSRS-VANSGLSDSLTTSTPRPSNGDSPSH  300 (389)
T ss_dssp             HHHHHHHHSSCTTTTCCSTTHHHHC-------------------------------------------------------
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCc-ccccccccccccccccccc-ccccccccccccCccccccCCCCCC
Confidence            999999999999987655443322211  11110 0000000000000000000 0000000000000000 00111122


Q ss_pred             HhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          336 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       336 ~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ......++.+.+||++||+.||++|||++|+|+||||++..
T Consensus       301 ~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~  341 (389)
T 3gni_B          301 PYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  341 (389)
T ss_dssp             -----CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred             ccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence            23456788999999999999999999999999999998754

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=2.9e-47  Score=358.58  Aligned_cols=258  Identities=27%  Similarity=0.383  Sum_probs=211.4

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc------hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      ...|++.+.||+|+||.||+|.++.+++.||+|++....      .....+.+|+.++..+     .|+||+++++++.+
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~~~   97 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-----KHPHIVELLETYSS   97 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-----CCTTBCCEEEEEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-----CCCCCCcEEEEEEe
Confidence            346889999999999999999999999999999986321      1345677899999888     78999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      .+..|+||||+ +++|.+.+...  ....+++..+..++.||+.||.|||+.||+||||||+||+++.+           
T Consensus        98 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~-----------  166 (351)
T 3c0i_A           98 DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASK-----------  166 (351)
T ss_dssp             TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSS-----------
T ss_pred             CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecC-----------
Confidence            99999999999 89998887643  22358999999999999999999999999999999999999543           


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                                   .....++|+|||.+.......   ....||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       167 -------------~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  233 (351)
T 3c0i_A          167 -------------ENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF  233 (351)
T ss_dssp             -------------STTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             -------------CCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCC
Confidence                         233458999999887654432   3457999999999999989999999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      .+.. .+....+.+.....+..                                             .+...+.++.+||
T Consensus       234 ~~~~-~~~~~~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~~li  267 (351)
T 3c0i_A          234 YGTK-ERLFEGIIKGKYKMNPR---------------------------------------------QWSHISESAKDLV  267 (351)
T ss_dssp             CSSH-HHHHHHHHHTCCCCCHH---------------------------------------------HHTTSCHHHHHHH
T ss_pred             CCcH-HHHHHHHHcCCCCCCcc---------------------------------------------ccccCCHHHHHHH
Confidence            8743 23333332222121111                                             1234678899999


Q ss_pred             hhccccCCCCCcCHHHHhcCCCCCC
Q 017021          350 QGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      .+||+.||++|||+.|+++||||++
T Consensus       268 ~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          268 RRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             HHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             HHHCCCChhHCcCHHHHhcChhhcC
Confidence            9999999999999999999999976

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=5.2e-47  Score=353.45  Aligned_cols=256  Identities=23%  Similarity=0.383  Sum_probs=207.1

Q ss_pred             eeechhhhhhhhccccccceeEEEEEec---CCCceEEEEEeeccc-----hhhHhHHHHHHHHHHHHhcCCCCCeeEEe
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGIK-----KYREAAMIEIEVLQQLAKHDKGGNRCVQI  109 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~  109 (379)
                      ..+....|++.+.||+|+||.||+|++.   .+++.||+|+++...     .......+|+.++..+     .|+||+++
T Consensus        12 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~   86 (327)
T 3a62_A           12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-----KHPFIVDL   86 (327)
T ss_dssp             -CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHC-----CCTTBCCE
T ss_pred             CCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-----CCCCccce
Confidence            3455678999999999999999999985   689999999997431     2334556788888887     68999999


Q ss_pred             cceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCC
Q 017021          110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD  188 (379)
Q Consensus       110 ~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~  188 (379)
                      ++++...+..|+||||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++          
T Consensus        87 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill----------  154 (327)
T 3a62_A           87 IYAFQTGGKLYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML----------  154 (327)
T ss_dssp             EEEEECSSCEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE----------
T ss_pred             eEEEEcCCEEEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEE----------
Confidence            99999999999999999 899999998754  68999999999999999999999999999999999999          


Q ss_pred             CccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhC
Q 017021          189 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG  265 (379)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g  265 (379)
                                       +.++.++|+|||.+......   .....||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus       155 -----------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g  217 (327)
T 3a62_A          155 -----------------NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG  217 (327)
T ss_dssp             -----------------CTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHS
T ss_pred             -----------------CCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHC
Confidence                             45567788888877643222   2345799999999999998899999999999999999999


Q ss_pred             CCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          266 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       266 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                      ..||.+.+..+....+.+.....|                                                 ...+..+
T Consensus       218 ~~pf~~~~~~~~~~~i~~~~~~~p-------------------------------------------------~~~~~~~  248 (327)
T 3a62_A          218 APPFTGENRKKTIDKILKCKLNLP-------------------------------------------------PYLTQEA  248 (327)
T ss_dssp             SCSCCCSSHHHHHHHHHHTCCCCC-------------------------------------------------TTSCHHH
T ss_pred             CCCCCCCCHHHHHHHHHhCCCCCC-------------------------------------------------CCCCHHH
Confidence            999998776665554444322222                                                 1356789


Q ss_pred             HHHHhhccccCCCCCc-----CHHHHhcCCCCCCCC
Q 017021          346 THLLQGLLRYDPTDRL-----TAREALRHPFFTRDH  376 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rp-----ta~e~l~hp~f~~~~  376 (379)
                      .+||.+||+.||.+||     +++|+++||||+..+
T Consensus       249 ~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~  284 (327)
T 3a62_A          249 RDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHIN  284 (327)
T ss_dssp             HHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCC
T ss_pred             HHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCC
Confidence            9999999999999999     899999999998653

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=9.2e-48  Score=360.54  Aligned_cols=256  Identities=25%  Similarity=0.420  Sum_probs=207.4

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ...|++.+.||+|+||.||+|.++.+++.||+|+++....   ...+|++++.++    ..|+||+++++++.+++..|+
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~----~~hp~iv~~~~~~~~~~~~~l   93 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRY----GQHPNIITLKDVYDDGKYVYV   93 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHH----TTSTTBCCEEEEEECSSEEEE
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHh----cCCCCcCeEEEEEEcCCEEEE
Confidence            3468899999999999999999999999999999975432   344578887776    257999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      ||||+ +++|.+.+....  .+++..+..++.||+.||.|||+.||+||||||+||++....                  
T Consensus        94 v~E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~------------------  153 (342)
T 2qr7_A           94 VTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDES------------------  153 (342)
T ss_dssp             EECCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSS------------------
T ss_pred             EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCC------------------
Confidence            99999 899999998764  699999999999999999999999999999999999984321                  


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc---h
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE---N  274 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~---~  274 (379)
                           .....++|+|||.+.......   ....||+.|+|||++.+..++.++|||||||++|+|++|..||....   .
T Consensus       154 -----~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  228 (342)
T 2qr7_A          154 -----GNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP  228 (342)
T ss_dssp             -----CSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCH
T ss_pred             -----CCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCH
Confidence                 122458999999887543322   34578999999999988788999999999999999999999997632   2


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .+....+.......+.                                             ..+...+.++.+||++||+
T Consensus       229 ~~~~~~i~~~~~~~~~---------------------------------------------~~~~~~s~~~~~li~~~L~  263 (342)
T 2qr7_A          229 EEILARIGSGKFSLSG---------------------------------------------GYWNSVSDTAKDLVSKMLH  263 (342)
T ss_dssp             HHHHHHHHHCCCCCCS---------------------------------------------TTTTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHccCCcccCc---------------------------------------------cccccCCHHHHHHHHHHCC
Confidence            2333322221111110                                             1123467899999999999


Q ss_pred             cCCCCCcCHHHHhcCCCCCC
Q 017021          355 YDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f~~  374 (379)
                      .||++|||++|+++||||.+
T Consensus       264 ~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          264 VDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             SSTTTSCCHHHHTTSHHHHT
T ss_pred             CChhHCcCHHHHhcCCeecC
Confidence            99999999999999999954

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=2.8e-47  Score=361.42  Aligned_cols=289  Identities=27%  Similarity=0.438  Sum_probs=221.1

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc-
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN-  117 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~-  117 (379)
                      ...|++.+.||+|+||.||+|.+..+++.||+|++...   ......+.+|+.++..+     .|+|++++++++...+ 
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~   98 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-----NHKNIIGLLNVFTPQKS   98 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEECSCCS
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhc-----CCCCccceEEeeccccc
Confidence            35689999999999999999999999999999999742   23345667888888887     7899999999987654 


Q ss_pred             -----eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          118 -----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       118 -----~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                           ..|+||||+.++|.+.+..    .+++..+..++.||+.||.|||+.||+||||||+||++              
T Consensus        99 ~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~--------------  160 (371)
T 2xrw_A           99 LEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--------------  160 (371)
T ss_dssp             TTTCCEEEEEEECCSEEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE--------------
T ss_pred             cccccceEEEEEcCCCCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE--------------
Confidence                 7899999998889988863    48999999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                                   +.++.++|+|||.+.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       161 -------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~  227 (371)
T 2xrw_A          161 -------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP  227 (371)
T ss_dssp             -------------CTTSCEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             -------------cCCCCEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence                         455678888888876544332  33578999999999999899999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhh-hhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRES-IKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      +.+..+....+.+..+.++.+.++.+......+..+.. .+...  ..+. ...... +.    ........+..+.+||
T Consensus       228 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~-~~----~~~~~~~~~~~~~~li  299 (371)
T 2xrw_A          228 GTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRP-KYAGY--SFEKLFPDVLF-PA----DSEHNKLKASQARDLL  299 (371)
T ss_dssp             CSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSC-CCCCC--CHHHHSCGGGS-CC----SSHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCc-ccccc--chhhhcccccC-cc----cccccccccHHHHHHH
Confidence            98888888888888888888888777666655554421 11110  0010 000000 00    0011122467899999


Q ss_pred             hhccccCCCCCcCHHHHhcCCCCCC
Q 017021          350 QGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      .+||+.||++|||++|+|+||||+.
T Consensus       300 ~~mL~~dP~~R~t~~e~l~hp~~~~  324 (371)
T 2xrw_A          300 SKMLVIDASKRISVDEALQHPYINV  324 (371)
T ss_dssp             HHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             HHHCcCChhhCCCHHHHhCCcchhh
Confidence            9999999999999999999999964

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=6.4e-47  Score=356.16  Aligned_cols=286  Identities=26%  Similarity=0.443  Sum_probs=222.3

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee---
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY---  115 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~---  115 (379)
                      ...|++.++||+|+||.||+|+++.+|+.||+|++...   ......+.+|+.++..+     .|+|++++++++..   
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~   90 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-----KHENVVNLIEICRTKAS   90 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHC-----CCTTBCCEEEEEEEC--
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhc-----cCCCcccHhheeecccc
Confidence            35789999999999999999999999999999998633   22344667899999888     68999999998876   


Q ss_pred             -----cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCc
Q 017021          116 -----RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       116 -----~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                           .+..|+||||+.++|.+.+.... ..+++..+..++.||+.||.|||+.||+||||||+||++            
T Consensus        91 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~------------  157 (351)
T 3mi9_A           91 PYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI------------  157 (351)
T ss_dssp             ------CEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE------------
T ss_pred             ccccCCceEEEEEeccCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE------------
Confidence                 45789999999878888887654 358999999999999999999999999999999999999            


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCC-------CCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHH
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVEL  262 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l  262 (379)
                                     +.++.++|+|||.+......       .....||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus       158 ---------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el  222 (351)
T 3mi9_A          158 ---------------TRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM  222 (351)
T ss_dssp             ---------------CTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHH
T ss_pred             ---------------cCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHH
Confidence                           45556777788777543311       123468999999999876 4579999999999999999


Q ss_pred             HhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccch
Q 017021          263 CTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  342 (379)
Q Consensus       263 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (379)
                      ++|..||.+.+..+....+.+..+.++...++.+......    ..........           ........  ....+
T Consensus       223 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-----------~~~~~~~~--~~~~~  285 (351)
T 3mi9_A          223 WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY----EKLELVKGQK-----------RKVKDRLK--AYVRD  285 (351)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGG----TSSCCCSSCC-----------CCHHHHHH--HHHCC
T ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhh----cccccccccc-----------cCHHHHhh--hccCC
Confidence            9999999999888888888888888887766544322110    0000000000           00000000  01235


Q ss_pred             hHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       343 ~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      +.+.+||.+||+.||++|||++|+|+||||+....
T Consensus       286 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  320 (351)
T 3mi9_A          286 PYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPM  320 (351)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSC
T ss_pred             hHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCC
Confidence            77999999999999999999999999999987543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=3.3e-47  Score=354.50  Aligned_cols=251  Identities=29%  Similarity=0.538  Sum_probs=187.3

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-C
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-G  127 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~  127 (379)
                      +.||+|+||.||+|.++.+++.||+|++...  ......+|+.++..+.    +|+||+++++++.++...|+||||+ +
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~----~h~niv~~~~~~~~~~~~~lv~e~~~~   90 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCE----GHPNIVKLHEVFHDQLHTFLVMELLNG   90 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTT----TCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhc----CCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence            7899999999999999999999999999743  3456667888888772    4899999999999999999999999 8


Q ss_pred             CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCC
Q 017021          128 SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK  207 (379)
Q Consensus       128 ~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (379)
                      ++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++..+                        ..
T Consensus        91 ~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~------------------------~~  144 (325)
T 3kn6_A           91 GELFERIKKKK--HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDE------------------------ND  144 (325)
T ss_dssp             CBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC---------------------------
T ss_pred             CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecC------------------------CC
Confidence            89999998864  69999999999999999999999999999999999999543                        22


Q ss_pred             CCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH-------HH
Q 017021          208 SSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL-------EH  277 (379)
Q Consensus       208 ~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~-------~~  277 (379)
                      ...++|+|||.+.......   ....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..       +.
T Consensus       145 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~  224 (325)
T 3kn6_A          145 NLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEI  224 (325)
T ss_dssp             -CEEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHH
T ss_pred             cccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHH
Confidence            3468999999887543332   3456899999999999989999999999999999999999999764321       11


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+..                       +....+                      ...+...++++.+||.+||+.||
T Consensus       225 ~~~i~~-----------------------~~~~~~----------------------~~~~~~~s~~~~~li~~~L~~dP  259 (325)
T 3kn6_A          225 MKKIKK-----------------------GDFSFE----------------------GEAWKNVSQEAKDLIQGLLTVDP  259 (325)
T ss_dssp             HHHHTT-----------------------TCCCCC----------------------SHHHHTSCHHHHHHHHHHHCCCT
T ss_pred             HHHHHc-----------------------CCCCCC----------------------cccccCCCHHHHHHHHHHCCCCh
Confidence            111111                       111111                      01123467899999999999999


Q ss_pred             CCCcCHHHHhcCCCCCCCC
Q 017021          358 TDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f~~~~  376 (379)
                      .+|||++|+++||||++..
T Consensus       260 ~~Rpt~~ell~h~w~~~~~  278 (325)
T 3kn6_A          260 NKRLKMSGLRYNEWLQDGS  278 (325)
T ss_dssp             TTCCCTTTSTTCGGGCTTC
T ss_pred             hHCCCHHHHhcChhhccCc
Confidence            9999999999999998753

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=8.2e-47  Score=357.28  Aligned_cols=280  Identities=28%  Similarity=0.485  Sum_probs=225.1

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec---
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---  116 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~---  116 (379)
                      +..|++.+.||+|+||.||+|.+..+++.||+|++...  ......+.+|+.++..+     .|+|++.+++++...   
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~  100 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-----RHENIIGINDIIRAPTIE  100 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-----CCTTBCCCCEEECCSSTT
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-----CCCCCccceeEEecCCcc
Confidence            45799999999999999999999999999999999732  23346677899999888     689999999988654   


Q ss_pred             --ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          117 --NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       117 --~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                        ...|+|||+++++|.+++...   .+++..+..++.||+.||.|||+.||+||||||+||++                
T Consensus       101 ~~~~~~iv~e~~~~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~----------------  161 (364)
T 3qyz_A          101 QMKDVYIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------  161 (364)
T ss_dssp             TCCCEEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----------------
T ss_pred             ccceEEEEEcccCcCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEE----------------
Confidence              478999999988999999875   49999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                                 +.++.++|+|||.+.......      ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.
T Consensus       162 -----------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  230 (364)
T 3qyz_A          162 -----------NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP  230 (364)
T ss_dssp             -----------CTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSC
T ss_pred             -----------CCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCC
Confidence                       455667888888776443321      23478999999998754 458999999999999999999999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhh-hhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAE-KYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      ||.+.+..+....+....+.++.+.+..+..... .+....  ..+..                 ..........+.++.
T Consensus       231 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----------------~~~~~~~~~~~~~~~  291 (364)
T 3qyz_A          231 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL--PHKNK-----------------VPWNRLFPNADSKAL  291 (364)
T ss_dssp             SSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTS--CCCCC-----------------CCHHHHCTTSCHHHH
T ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhc--CCccC-----------------CCHHHhCCCCCHHHH
Confidence            9999988888888999889888877665332221 111100  00000                 001122335678899


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +||.+||+.||++|||++|+|+||||++.
T Consensus       292 ~li~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          292 DLLDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence            99999999999999999999999999864

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=4.1e-47  Score=357.27  Aligned_cols=257  Identities=25%  Similarity=0.417  Sum_probs=199.2

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      ..|++.+.||+|+||.||+|+++.+++.||+|+++... ....+.+|+.++..+     .|+||+++++++...+..++|
T Consensus        53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv  126 (349)
T 2w4o_A           53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRL-----SHPNIIKLKEIFETPTEISLV  126 (349)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHC-----CCTTBCCEEEEEECSSEEEEE
T ss_pred             CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhC-----CCCCCcceeeeEecCCeEEEE
Confidence            45899999999999999999999999999999998533 345667799999888     689999999999999999999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      |||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++...                    
T Consensus       127 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~--------------------  184 (349)
T 2w4o_A          127 LELVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATP--------------------  184 (349)
T ss_dssp             ECCCCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSS--------------------
T ss_pred             EEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecC--------------------
Confidence            9999 899999997754  68999999999999999999999999999999999999431                    


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH-HH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE-HL  278 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~-~~  278 (379)
                          +.++.++|+|||.+.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||......+ ..
T Consensus       185 ----~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  260 (349)
T 2w4o_A          185 ----APDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF  260 (349)
T ss_dssp             ----STTCCEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHH
T ss_pred             ----CCCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHH
Confidence                236678999999887544332  34578999999999999899999999999999999999999997655433 22


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCC
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  358 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  358 (379)
                      ..+.......+.                                             ..++..+.++.+||.+||+.||+
T Consensus       261 ~~i~~~~~~~~~---------------------------------------------~~~~~~~~~~~~li~~~L~~dP~  295 (349)
T 2w4o_A          261 RRILNCEYYFIS---------------------------------------------PWWDEVSLNAKDLVRKLIVLDPK  295 (349)
T ss_dssp             HHHHTTCCCCCT---------------------------------------------TTTTTSCHHHHHHHHTTSCSSGG
T ss_pred             HHHHhCCCccCC---------------------------------------------chhhhCCHHHHHHHHHHccCChh
Confidence            222221111110                                             01234677899999999999999


Q ss_pred             CCcCHHHHhcCCCCCCCC
Q 017021          359 DRLTAREALRHPFFTRDH  376 (379)
Q Consensus       359 ~Rpta~e~l~hp~f~~~~  376 (379)
                      +|||+.|+++||||++..
T Consensus       296 ~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          296 KRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             GSCCHHHHHHSTTTTSTT
T ss_pred             hCcCHHHHhcCcccCCCc
Confidence            999999999999998754

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.4e-47  Score=357.48  Aligned_cols=280  Identities=26%  Similarity=0.448  Sum_probs=219.0

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch------hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~------~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      ...|++.+.||+|+||.||+|.++.+|+.||+|++.....      ....+.+|+.++..+     .|+|++++++++..
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~   83 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-----SHPNIIGLLDAFGH   83 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-----CCTTBCCEEEEECC
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-----CCCCCCeEEEEEee
Confidence            4578999999999999999999999999999999874221      124567899999888     68999999999999


Q ss_pred             cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          116 RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       116 ~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      .+..++||||+.++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||++                 
T Consensus        84 ~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~-----------------  145 (346)
T 1ua2_A           84 KSNISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL-----------------  145 (346)
T ss_dssp             TTCCEEEEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE-----------------
T ss_pred             CCceEEEEEcCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEE-----------------
Confidence            99999999999779999887653 358889999999999999999999999999999999999                 


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                +.++.++|+|||.+.......   ....||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+
T Consensus       146 ----------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~  215 (346)
T 1ua2_A          146 ----------DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPG  215 (346)
T ss_dssp             ----------CTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ----------cCCCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence                      455678888888876543322   345789999999999764 588999999999999999999999999


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .+..+....+.+..+.++...|+......+.........                .     .........+.++.+||.+
T Consensus       216 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~-----~~~~~~~~~~~~~~~li~~  274 (346)
T 1ua2_A          216 DSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPG----------------I-----PLHHIFSAAGDDLLDLIQG  274 (346)
T ss_dssp             SSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCC----------------C-----CHHHHCTTCCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCC----------------C-----ChHHhhccCCHHHHHHHHH
Confidence            888888888877777766554443322111110000000                0     0112234567899999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||+.||++|||++|+++||||+..
T Consensus       275 ~L~~dP~~Rpt~~ell~h~~f~~~  298 (346)
T 1ua2_A          275 LFLFNPCARITATQALKMKYFSNR  298 (346)
T ss_dssp             HHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             HhccChhhCCCHHHHhcChhhhcC
Confidence            999999999999999999999864

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=6.5e-47  Score=358.45  Aligned_cols=255  Identities=25%  Similarity=0.376  Sum_probs=206.3

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchh----hHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY----REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~----~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      .....|++.+.||+|+||.||+|+++.+++.||+|+++.....    ......|..++    .....|++|+++++.+.+
T Consensus        35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~l----l~~~~hp~Iv~l~~~~~~  110 (373)
T 2r5t_A           35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVL----LKNVKHPFLVGLHFSFQT  110 (373)
T ss_dssp             CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CC----BCCCCCTTBCCEEEEEEC
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHH----HHhCCCCCCCCEEEEEEe
Confidence            4456789999999999999999999999999999999754321    12222232221    122478999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+..|+||||+ |++|.+++....  .+++..++.++.||+.||+|||+.||+||||||+||++                
T Consensus       111 ~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll----------------  172 (373)
T 2r5t_A          111 ADKLYFVLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL----------------  172 (373)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----------------
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE----------------
Confidence            99999999999 899999998754  68999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccC---CCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                 +.++.++|+|||++....   ......+||+.|+|||++.+..++.++|+|||||++|+|++|..||.+
T Consensus       173 -----------~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~  241 (373)
T 2r5t_A          173 -----------DSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS  241 (373)
T ss_dssp             -----------CTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             -----------CCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence                       556678888888876422   223456899999999999999999999999999999999999999998


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .+..+....+.......+                                                 ...+..+.+||.+
T Consensus       242 ~~~~~~~~~i~~~~~~~~-------------------------------------------------~~~~~~~~~li~~  272 (373)
T 2r5t_A          242 RNTAEMYDNILNKPLQLK-------------------------------------------------PNITNSARHLLEG  272 (373)
T ss_dssp             SBHHHHHHHHHHSCCCCC-------------------------------------------------SSSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcccCCC-------------------------------------------------CCCCHHHHHHHHH
Confidence            777666554443211111                                                 2356789999999


Q ss_pred             ccccCCCCCcCH----HHHhcCCCCCCCC
Q 017021          352 LLRYDPTDRLTA----REALRHPFFTRDH  376 (379)
Q Consensus       352 ~L~~dP~~Rpta----~e~l~hp~f~~~~  376 (379)
                      ||+.||.+||++    .++++||||+..+
T Consensus       273 lL~~dp~~R~~~~~~~~~i~~h~~f~~~~  301 (373)
T 2r5t_A          273 LLQKDRTKRLGAKDDFMEIKSHVFFSLIN  301 (373)
T ss_dssp             HTCSSGGGSTTTTTTHHHHHTSGGGTTCC
T ss_pred             HcccCHHhCCCCCCCHHHHhCCccccCCC
Confidence            999999999987    6999999998754

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=6e-47  Score=350.56  Aligned_cols=250  Identities=23%  Similarity=0.340  Sum_probs=197.3

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch---hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ..|++.++||+|+||+||+|+++.+++.||+|++.....   .......|+..+..+    ..|+|++++++++.+++..
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~----~~h~~iv~l~~~~~~~~~~  132 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKV----GQHPCCVRLEQAWEEGGIL  132 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHH----CCCTTBCCEEEEEEETTEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHh----cCCCcEEEEEEEEEeCCEE
Confidence            568999999999999999999999999999999864322   223333444444443    2679999999999999999


Q ss_pred             EEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          120 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       120 ~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      |+||||++++|.+++.... ..+++..+..++.||+.||+|||+.||+||||||+||+++                    
T Consensus       133 ~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~--------------------  191 (311)
T 3p1a_A          133 YLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG--------------------  191 (311)
T ss_dssp             EEEEECCCCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC--------------------
T ss_pred             EEEEeccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC--------------------
Confidence            9999999999999987754 3699999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                             .++.++|+|||.+.......  ....||+.|+|||++.+ .++.++|||||||++|+|++|..|+....... 
T Consensus       192 -------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-  262 (311)
T 3p1a_A          192 -------PRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQ-  262 (311)
T ss_dssp             -------GGGCEEECCCTTCEECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH-
T ss_pred             -------CCCCEEEccceeeeecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHH-
Confidence                   44567777777776543332  23468999999999876 78999999999999999999977665422211 


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                        .+.+  +..+.                                             ......+.++.++|.+||+.||
T Consensus       263 --~~~~--~~~~~---------------------------------------------~~~~~~~~~l~~li~~~L~~dP  293 (311)
T 3p1a_A          263 --QLRQ--GYLPP---------------------------------------------EFTAGLSSELRSVLVMMLEPDP  293 (311)
T ss_dssp             --HHTT--TCCCH---------------------------------------------HHHTTSCHHHHHHHHHHSCSST
T ss_pred             --HHhc--cCCCc---------------------------------------------ccccCCCHHHHHHHHHHcCCCh
Confidence              1100  11111                                             1223467889999999999999


Q ss_pred             CCCcCHHHHhcCCCCCCC
Q 017021          358 TDRLTAREALRHPFFTRD  375 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f~~~  375 (379)
                      ++|||++|+++||||+++
T Consensus       294 ~~Rpt~~ell~hp~~~~p  311 (311)
T 3p1a_A          294 KLRATAEALLALPVLRQP  311 (311)
T ss_dssp             TTSCCHHHHHTSGGGSCC
T ss_pred             hhCcCHHHHHhCccccCC
Confidence            999999999999999864

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=2e-47  Score=355.63  Aligned_cols=254  Identities=24%  Similarity=0.349  Sum_probs=204.3

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ..|++.+.||+|+||.||+|.++.+++.||+|++....  .....+.+|+.++..+     .|+||+++++++.+++..|
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~~~~~~~~   81 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNIQY   81 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHC-----CCTTBCCEEEEEECSSEEE
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhC-----CCCCCCeEEEEEecCCeEE
Confidence            46889999999999999999999999999999986432  2335667889888887     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++                     
T Consensus        82 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---------------------  138 (323)
T 3tki_A           82 LFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---------------------  138 (323)
T ss_dssp             EEEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---------------------
T ss_pred             EEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEE---------------------
Confidence            999999 889999887654  69999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhhCCCC-CCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                            +.++.++|+|||.+......     .....||+.|+|||++.+..+ +.++|||||||++|+|++|..||....
T Consensus       139 ------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  212 (323)
T 3tki_A          139 ------DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS  212 (323)
T ss_dssp             ------CTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSC
T ss_pred             ------eCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence                  55567888888887543221     134578999999999988775 688999999999999999999997654


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ................                                              ..+...+..+.+||.+||
T Consensus       213 ~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~~L  246 (323)
T 3tki_A          213 DSCQEYSDWKEKKTYL----------------------------------------------NPWKKIDSAPLALLHKIL  246 (323)
T ss_dssp             TTSHHHHHHHTTCTTS----------------------------------------------TTGGGSCHHHHHHHHHHS
T ss_pred             hHHHHHHHHhcccccC----------------------------------------------CccccCCHHHHHHHHHHc
Confidence            3211111000000000                                              011346778999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +.||++|||++|+++||||+...
T Consensus       247 ~~dP~~R~t~~eil~h~~~~~~~  269 (323)
T 3tki_A          247 VENPSARITIPDIKKDRWYNKPL  269 (323)
T ss_dssp             CSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             cCChhhCcCHHHHhhChhhcccc
Confidence            99999999999999999998654

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=7.4e-47  Score=364.69  Aligned_cols=259  Identities=23%  Similarity=0.357  Sum_probs=213.7

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      .+....|++.++||+|+||.||+|+++.+++.||+|+++...    .....+..|..++..+     .|++|+++++++.
T Consensus        70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-----~hp~Iv~l~~~~~  144 (437)
T 4aw2_A           70 RLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-----DSKWITTLHYAFQ  144 (437)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-----CTTTBCCEEEEEE
T ss_pred             cCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-----CCCCEEEEEEEEe
Confidence            344567899999999999999999999999999999997422    2223366788888776     7899999999999


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      +.+..|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||+.||+||||||+|||+               
T Consensus       145 ~~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---------------  208 (437)
T 4aw2_A          145 DDNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---------------  208 (437)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---------------
T ss_pred             eCCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeE---------------
Confidence            999999999999 999999998743 369999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhh-----CCCCCCccchHhHHHHHHHHHh
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~~l~~  264 (379)
                                  +.++.+||+|||++.......    ...+||+.|+|||++.     ...++.++|||||||++|+|++
T Consensus       209 ------------~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~ellt  276 (437)
T 4aw2_A          209 ------------DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLY  276 (437)
T ss_dssp             ------------CTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHH
T ss_pred             ------------cCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHh
Confidence                        556678888888776443332    2357999999999987     4568999999999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHHc--CCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccch
Q 017021          265 GEALFQTHENLEHLAMMERVL--GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  342 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (379)
                      |+.||.+.+..+....+....  ...|.                                              .....+
T Consensus       277 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~----------------------------------------------~~~~~s  310 (437)
T 4aw2_A          277 GETPFYAESLVETYGKIMNHKERFQFPT----------------------------------------------QVTDVS  310 (437)
T ss_dssp             SSCTTCCSSHHHHHHHHHTHHHHCCCCS----------------------------------------------SCCCSC
T ss_pred             CCCCCCCCChhHHHHhhhhccccccCCc----------------------------------------------ccccCC
Confidence            999999887766665553311  11111                                              012367


Q ss_pred             hHHHHHHhhccccCCCC--CcCHHHHhcCCCCCCCC
Q 017021          343 GDLTHLLQGLLRYDPTD--RLTAREALRHPFFTRDH  376 (379)
Q Consensus       343 ~~~~~li~~~L~~dP~~--Rpta~e~l~hp~f~~~~  376 (379)
                      +++++||++||+.+|++  |++++|+++||||++.+
T Consensus       311 ~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~  346 (437)
T 4aw2_A          311 ENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGID  346 (437)
T ss_dssp             HHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCC
Confidence            88999999999999988  99999999999998754

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=1.3e-46  Score=355.11  Aligned_cols=286  Identities=29%  Similarity=0.451  Sum_probs=215.0

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc-----
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN-----  117 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~-----  117 (379)
                      ..|++.+.||+|+||.||+|+++.+++.||+|++............++..+..+     .|+|++++++++...+     
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l-----~h~niv~~~~~~~~~~~~~~~   97 (360)
T 3e3p_A           23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL-----HHPNIVQLQSYFYTLGERDRR   97 (360)
T ss_dssp             TTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHH-----CCTTBCCEEEEEEEECSSCTT
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhc-----CCCCcccHHHhhhcccccccc
Confidence            468899999999999999999999999999999976555555666677777777     7899999999986533     


Q ss_pred             --eEEEEEeCCCCCHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHH--HcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          118 --HICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMH--DLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       118 --~~~lv~e~~~~sL~~~l~~--~~~~~l~~~~~~~~~~qi~~aL~~LH--~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                        ..++||||+.++|.+.+..  .....+++..+..++.|++.||.|||  +.||+||||||+||+++.           
T Consensus        98 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~-----------  166 (360)
T 3e3p_A           98 DIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE-----------  166 (360)
T ss_dssp             CEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEET-----------
T ss_pred             ceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeC-----------
Confidence              3899999997777766653  23346899999999999999999999  999999999999999952           


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCC-CCCccchHhHHHHHHHHHhCCCC
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                                     .++.++|+|||.+.......  ....||+.|+|||++.+.. ++.++|||||||++|+|++|+.|
T Consensus       167 ---------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~p  231 (360)
T 3e3p_A          167 ---------------ADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPI  231 (360)
T ss_dssp             ---------------TTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ---------------CCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                           25578888888886544332  3456899999999987654 89999999999999999999999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |.+.+..+....+.+..+.++.+.+..+..............                 ..............+.++.+|
T Consensus       232 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l  294 (360)
T 3e3p_A          232 FRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKG-----------------IPWSNVFSDHSLKDAKEAYDL  294 (360)
T ss_dssp             SCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCC-----------------CCHHHHTTTCCCTTHHHHHHH
T ss_pred             cCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhcccccccc-----------------CCcccccchhhccccHHHHHH
Confidence            999998888999999999999888776543322111100000                 001111112223467889999


Q ss_pred             HhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          349 LQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      |.+||+.||.+|||+.|+|+||||++..
T Consensus       295 i~~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          295 LSALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             HHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             HHHHhccCccccCCHHHHhcCccccccC
Confidence            9999999999999999999999998653

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.2e-47  Score=362.57  Aligned_cols=281  Identities=28%  Similarity=0.521  Sum_probs=221.4

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee----
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~----  115 (379)
                      .....|++.+.||+|+||.||+|.+..+|+.||+|++.....   ...+|+.++..+     .|+||+++++++..    
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l-----~hpnIv~l~~~~~~~~~~   75 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVL-----DHVNIIKLVDYFYTTGDE   75 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTC-----CCTTBCCEEEEEEEC---
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHc-----CCCCccchhheeeecCcc
Confidence            345579999999999999999999999999999999875432   234688888777     78999999998843    


Q ss_pred             ----------------------------------cceEEEEEeCCCCCHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHH
Q 017021          116 ----------------------------------RNHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIA  159 (379)
Q Consensus       116 ----------------------------------~~~~~lv~e~~~~sL~~~l~~--~~~~~l~~~~~~~~~~qi~~aL~  159 (379)
                                                        ..+.++||||+.++|.+.+..  .....+++..+..++.||+.||.
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~  155 (383)
T 3eb0_A           76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG  155 (383)
T ss_dssp             ----------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                                              345899999998888888764  23346999999999999999999


Q ss_pred             HHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC--CCcccccCCccc
Q 017021          160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRA  237 (379)
Q Consensus       160 ~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~--~~~~~gt~~y~a  237 (379)
                      |||+.||+||||||+||+++.                          .++.++|+|||.+......  .....||+.|+|
T Consensus       156 ~LH~~gi~H~Dikp~Nil~~~--------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~a  209 (383)
T 3eb0_A          156 FIHSLGICHRDIKPQNLLVNS--------------------------KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRA  209 (383)
T ss_dssp             HHHTTTEECSCCCGGGEEEET--------------------------TTTEEEECCCTTCEECCTTSCCCCCCCCSSCCC
T ss_pred             HHHHCcCccCccCHHHEEEcC--------------------------CCCcEEEEECCCCcccCCCCCCcCcccCCCccC
Confidence            999999999999999999942                          3457888888888754332  234578999999


Q ss_pred             hhhhhCCC-CCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCC
Q 017021          238 PEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  316 (379)
Q Consensus       238 PE~~~~~~-~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (379)
                      ||++.+.. ++.++|||||||++|+|++|+.||.+.+..+....+.+..+.++.+.+.........      ..++....
T Consensus       210 PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~------~~~~~~~~  283 (383)
T 3eb0_A          210 PELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTE------VRFPTLKA  283 (383)
T ss_dssp             HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--------CCCCCCCC
T ss_pred             HHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCccccc------ccCCccCc
Confidence            99987754 899999999999999999999999999999999999999998887766544322111      11111000


Q ss_pred             chhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          317 SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                                    ...........+.++.+||.+||+.||.+|||+.|+++||||++
T Consensus       284 --------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          284 --------------KDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH  327 (383)
T ss_dssp             --------------CCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred             --------------ccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence                          01111223456788999999999999999999999999999964

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=8.2e-47  Score=358.64  Aligned_cols=253  Identities=23%  Similarity=0.414  Sum_probs=208.9

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      ....|++.+.||+|+||.||+|.++.+++.||+|++....    .....+.+|+.++..+     .|+||+.+++++.+.
T Consensus        13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-----~hp~Iv~l~~~~~~~   87 (384)
T 4fr4_A           13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-----EHPFLVNLWYSFQDE   87 (384)
T ss_dssp             CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-----CCTTBCCEEEEEECS
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEeC
Confidence            3456889999999999999999999999999999997432    2335666788888877     789999999999999


Q ss_pred             ceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          117 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       117 ~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      +..|+||||+ |++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++                 
T Consensus        88 ~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll-----------------  148 (384)
T 4fr4_A           88 EDMFMVVDLLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL-----------------  148 (384)
T ss_dssp             SEEEEEECCCTTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE-----------------
T ss_pred             CEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE-----------------
Confidence            9999999999 999999998754  69999999999999999999999999999999999999                 


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhC---CCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                                +.++.++|+|||.+.......  ....||+.|+|||++.+   ..++.++|||||||++|+|++|..||.
T Consensus       149 ----------~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~  218 (384)
T 4fr4_A          149 ----------DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH  218 (384)
T ss_dssp             ----------CTTSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ----------CCCCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCC
Confidence                      566678888888886543322  45679999999999864   458899999999999999999999997


Q ss_pred             CCchH---HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          271 THENL---EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       271 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ..+..   +....+.......|                                                 ..++..+.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~p-------------------------------------------------~~~s~~~~~  249 (384)
T 4fr4_A          219 IRSSTSSKEIVHTFETTVVTYP-------------------------------------------------SAWSQEMVS  249 (384)
T ss_dssp             CCTTSCHHHHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHH
T ss_pred             CCCCccHHHHHHHHhhcccCCC-------------------------------------------------CcCCHHHHH
Confidence            54322   22222211111111                                                 235678999


Q ss_pred             HHhhccccCCCCCcC-HHHHhcCCCCCCCC
Q 017021          348 LLQGLLRYDPTDRLT-AREALRHPFFTRDH  376 (379)
Q Consensus       348 li~~~L~~dP~~Rpt-a~e~l~hp~f~~~~  376 (379)
                      ||.+||+.||.+||+ ++++++||||++.+
T Consensus       250 li~~lL~~dP~~R~s~~~~l~~hp~f~~~~  279 (384)
T 4fr4_A          250 LLKKLLEPNPDQRFSQLSDVQNFPYMNDIN  279 (384)
T ss_dssp             HHHHHSCSSGGGSCCSHHHHHTSGGGTTCC
T ss_pred             HHHHHhcCCHhHhcccHHHHHcChhhhcCC
Confidence            999999999999998 99999999998754

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=1.1e-46  Score=343.88  Aligned_cols=258  Identities=25%  Similarity=0.395  Sum_probs=216.2

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ..|++.+.||+|+||.||+|.++.+++.||+|++....   .....+.+|+.++..+     .|+|++++++++..++..
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   80 (284)
T 3kk8_A            6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-----QHPNIVRLHDSIQEESFH   80 (284)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEECSSEE
T ss_pred             hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHc-----CCCCcCeEEEEEEcCCEE
Confidence            46889999999999999999999999999999997432   2234566788888888     689999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      ++||||+ +++|.+.+....  .+++..+..++.|++.||.|||+.|++||||||+||+++.+                 
T Consensus        81 ~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~-----------------  141 (284)
T 3kk8_A           81 YLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASK-----------------  141 (284)
T ss_dssp             EEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSS-----------------
T ss_pred             EEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecC-----------------
Confidence            9999999 889999887764  68999999999999999999999999999999999999543                 


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                             .....++|+|||.+.......  ....||+.|+|||.+.+..++.++||||||+++|+|++|..||...+..+
T Consensus       142 -------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~  214 (284)
T 3kk8_A          142 -------AKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR  214 (284)
T ss_dssp             -------STTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             -------CCCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH
Confidence                   233558999999886554433  33578999999999999899999999999999999999999998877766


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.......+..                                             .+...++++.+||.+||+.|
T Consensus       215 ~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~li~~~l~~d  249 (284)
T 3kk8_A          215 LYAQIKAGAYDYPSP---------------------------------------------EWDTVTPEAKSLIDSMLTVN  249 (284)
T ss_dssp             HHHHHHHTCCCCCTT---------------------------------------------TTTTSCHHHHHHHHHHSCSS
T ss_pred             HHHHHHhccccCCch---------------------------------------------hhcccCHHHHHHHHHHcccC
Confidence            655554433322211                                             01235678999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~~  376 (379)
                      |++|||++|+++||||++.+
T Consensus       250 p~~Rps~~~~l~h~~~~~~~  269 (284)
T 3kk8_A          250 PKKRITADQALKVPWICNRE  269 (284)
T ss_dssp             TTTSCCHHHHTTSHHHHSCC
T ss_pred             hhhCCCHHHHhcCccccCCh
Confidence            99999999999999998764

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=4.7e-47  Score=368.47  Aligned_cols=252  Identities=25%  Similarity=0.407  Sum_probs=204.6

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      ...|++.++||+|+||.||+|.++.+|+.||+|+++...    ........|+.+++.+     .|+|++.+++++...+
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~l~~~~~~~~  221 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-----RHPFLTALKYSFQTHD  221 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCC-----SCTTSCCEEEEEEETT
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-----CCCeEeeEEEEEeeCC
Confidence            456899999999999999999999999999999997431    2223344565555554     6899999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      .+|+||||+ +++|.+++....  .+++..+..++.||+.||+|||+ .||+||||||+|||+                 
T Consensus       222 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll-----------------  282 (446)
T 4ejn_A          222 RLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML-----------------  282 (446)
T ss_dssp             EEEEEECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEE-----------------
T ss_pred             EEEEEEeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEE-----------------
Confidence            999999999 899999997754  68999999999999999999998 999999999999999                 


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                +.++.++|+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus       283 ----------~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  352 (446)
T 4ejn_A          283 ----------DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ  352 (446)
T ss_dssp             ----------CSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ----------CCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC
Confidence                      45567888888877643222   23467999999999999999999999999999999999999999887


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+....+.......|                                                 ...++++.+||.+|
T Consensus       353 ~~~~~~~~i~~~~~~~p-------------------------------------------------~~~~~~~~~li~~~  383 (446)
T 4ejn_A          353 DHEKLFELILMEEIRFP-------------------------------------------------RTLGPEAKSLLSGL  383 (446)
T ss_dssp             SHHHHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHhCCCCCC-------------------------------------------------ccCCHHHHHHHHHH
Confidence            76665554443222222                                                 13567899999999


Q ss_pred             cccCCCCCc-----CHHHHhcCCCCCCCC
Q 017021          353 LRYDPTDRL-----TAREALRHPFFTRDH  376 (379)
Q Consensus       353 L~~dP~~Rp-----ta~e~l~hp~f~~~~  376 (379)
                      |+.||.+||     |++|+++||||++..
T Consensus       384 L~~dP~~R~~~~~~t~~ell~hp~f~~~~  412 (446)
T 4ejn_A          384 LKKDPKQRLGGGSEDAKEIMQHRFFAGIV  412 (446)
T ss_dssp             TCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             cccCHHHhCCCCCCCHHHHHhCccccCCC
Confidence            999999999     999999999999754

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=1.3e-46  Score=342.19  Aligned_cols=256  Identities=25%  Similarity=0.421  Sum_probs=216.3

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ...|++.+.||+|+||.||+|.++.++..||+|++... ......+.+|+.++..+     .|+|++++++++.+.+..+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~   82 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-----DHPNIIRLYETFEDNTDIY   82 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSSEEE
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhC-----CCCCEeeEEEEEecCCeEE
Confidence            34689999999999999999999999999999998743 23345677888888887     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||++..+                  
T Consensus        83 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~------------------  142 (277)
T 3f3z_A           83 LVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD------------------  142 (277)
T ss_dssp             EEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS------------------
T ss_pred             EEEeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecC------------------
Confidence            999999 889999987754  68999999999999999999999999999999999999332                  


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                            +.+..++|+|||.+.......  ....||+.|+|||.+.+. ++.++||||||+++|+|++|..||...+..+.
T Consensus       143 ------~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~  215 (277)
T 3f3z_A          143 ------SPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV  215 (277)
T ss_dssp             ------STTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ------CCCCcEEEEecccceeccCccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHH
Confidence                  355678999999886544332  345789999999998764 89999999999999999999999998777776


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.+.....+...+                                             ...++.+.++|.+||+.||
T Consensus       216 ~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~li~~~l~~dp  250 (277)
T 3f3z_A          216 MLKIREGTFTFPEKDW---------------------------------------------LNVSPQAESLIRRLLTKSP  250 (277)
T ss_dssp             HHHHHHCCCCCCHHHH---------------------------------------------TTSCHHHHHHHHHHTCSST
T ss_pred             HHHHHhCCCCCCchhh---------------------------------------------hcCCHHHHHHHHHHccCCh
Confidence            6666554444443221                                             2356789999999999999


Q ss_pred             CCCcCHHHHhcCCCCCC
Q 017021          358 TDRLTAREALRHPFFTR  374 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f~~  374 (379)
                      .+|||+.|+++||||++
T Consensus       251 ~~R~s~~~~l~h~~~~~  267 (277)
T 3f3z_A          251 KQRITSLQALEHEWFEK  267 (277)
T ss_dssp             TTSCCHHHHTTSHHHHH
T ss_pred             hhCcCHHHHhcCHHHhc
Confidence            99999999999999975

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=5.7e-47  Score=363.45  Aligned_cols=293  Identities=26%  Similarity=0.469  Sum_probs=209.5

Q ss_pred             hhh-hhccccccceeEEEEEec--CCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee--ecceE
Q 017021           45 DKI-HSKMGEGTFGQVLECWDR--ERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD--YRNHI  119 (379)
Q Consensus        45 y~i-~~~Lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~--~~~~~  119 (379)
                      |++ .++||+|+||.||+|+++  .+++.||+|++... .....+.+|+.++..+     .|+||+++++++.  .....
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~~~   95 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT-GISMSACREIALLREL-----KHPNVISLQKVFLSHADRKV   95 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS-SCCHHHHHHHHHHHHC-----CCTTBCCCCEEEEETTTTEE
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC-CCCHHHHHHHHHHHhc-----CCCCeeeEeeEEecCCCCeE
Confidence            444 458999999999999965  56899999999743 3345677899999998     6899999999995  47789


Q ss_pred             EEEEeCCCCCHHHHHHhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          120 CIVFEKLGSSLYDFLRKNN-------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       120 ~lv~e~~~~sL~~~l~~~~-------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      |+||||++++|.+++....       ...+++..++.++.||+.||.|||+.||+||||||+||++...+          
T Consensus        96 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~----------  165 (405)
T 3rgf_A           96 WLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG----------  165 (405)
T ss_dssp             EEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSS----------
T ss_pred             EEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCC----------
Confidence            9999999889998886321       12489999999999999999999999999999999999994321          


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCC------CCcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTG  265 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g  265 (379)
                                   +..+.++|+|||.+......      .....||+.|+|||++.+. .++.++|||||||++|+|++|
T Consensus       166 -------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g  232 (405)
T 3rgf_A          166 -------------PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS  232 (405)
T ss_dssp             -------------TTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHS
T ss_pred             -------------CCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhC
Confidence                         35567899999988754432      1335789999999999874 489999999999999999999


Q ss_pred             CCCCCCCch---------HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHH
Q 017021          266 EALFQTHEN---------LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ  336 (379)
Q Consensus       266 ~~pf~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (379)
                      ..||.+...         .+....+.+.++.++...|..+.............           ................
T Consensus       233 ~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~  301 (405)
T 3rgf_A          233 EPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDF-----------RRNTYTNCSLIKYMEK  301 (405)
T ss_dssp             SCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHC-----------CGGGGTTCCHHHHHHT
T ss_pred             CCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhc-----------cccCCCcchhhhhHhh
Confidence            999976543         36667777778877766655443221111000000           0000001111122222


Q ss_pred             hhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       337 ~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      .....+..+.+||.+||+.||.+||||+|+|+||||++..+
T Consensus       302 ~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~  342 (405)
T 3rgf_A          302 HKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPL  342 (405)
T ss_dssp             TTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSC
T ss_pred             cCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCC
Confidence            33345778999999999999999999999999999987643

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=6.9e-47  Score=352.61  Aligned_cols=261  Identities=24%  Similarity=0.365  Sum_probs=213.3

Q ss_pred             hhhhh-hccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIH-SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~-~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|.+. +.||+|+||.||+|.++.+++.||+|++....   .....+.+|+.++..+    .+|++++++++++...+..
T Consensus        29 ~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l----~~~~~iv~~~~~~~~~~~~  104 (327)
T 3lm5_A           29 FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELA----KSCPRVINLHEVYENTSEI  104 (327)
T ss_dssp             HEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHT----TTCTTBCCEEEEEECSSEE
T ss_pred             EEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhc----cCCCCEEEEEEEEEeCCeE
Confidence            35555 88999999999999999999999999997432   2345667788888776    3568999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      ++||||+ +++|.+++.......+++..+..++.||+.||+|||+.|++||||||+||+++..                 
T Consensus       105 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~-----------------  167 (327)
T 3lm5_A          105 ILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSI-----------------  167 (327)
T ss_dssp             EEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCB-----------------
T ss_pred             EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecC-----------------
Confidence            9999999 8899999866544579999999999999999999999999999999999999431                 


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                             ...+.++|+|||.+.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+
T Consensus       168 -------~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~  240 (327)
T 3lm5_A          168 -------YPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE  240 (327)
T ss_dssp             -------TTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             -------CCCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH
Confidence                   125678999999887554432  34579999999999999899999999999999999999999999887776


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.+.....+...                                             ....+..+.++|.+||+.|
T Consensus       241 ~~~~i~~~~~~~~~~~---------------------------------------------~~~~~~~~~~li~~~L~~d  275 (327)
T 3lm5_A          241 TYLNISQVNVDYSEET---------------------------------------------FSSVSQLATDFIQSLLVKN  275 (327)
T ss_dssp             HHHHHHHTCCCCCTTT---------------------------------------------TTTSCHHHHHHHHHHSCSS
T ss_pred             HHHHHHhcccccCchh---------------------------------------------hcccCHHHHHHHHHHcCCC
Confidence            6665555443333211                                             1235678999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCCCc
Q 017021          357 PTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~~~  377 (379)
                      |.+|||++|+|+||||++.+.
T Consensus       276 P~~Rpt~~~ll~h~~~~~~~~  296 (327)
T 3lm5_A          276 PEKRPTAEICLSHSWLQQWDF  296 (327)
T ss_dssp             GGGSCCHHHHTTCGGGCCCCT
T ss_pred             hhhCcCHHHHhCCHhhccccc
Confidence            999999999999999987654

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.2e-47  Score=351.20  Aligned_cols=250  Identities=24%  Similarity=0.395  Sum_probs=199.5

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch---------------------------hhHhHHHHHHHHHH
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---------------------------YREAAMIEIEVLQQ   95 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---------------------------~~~~~~~e~~~l~~   95 (379)
                      ..|++.+.||+|+||.||+|++..+++.||+|++.....                           ....+.+|+.++..
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   92 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK   92 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence            468899999999999999999999999999999974321                           12456778888888


Q ss_pred             HHhcCCCCCeeEEecceeee--cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Q 017021           96 LAKHDKGGNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLK  172 (379)
Q Consensus        96 l~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlk  172 (379)
                      +     .|+|++++++++.+  .+..|+||||+ +++|.+++..   ..+++..+..++.||+.||.|||+.|++|||||
T Consensus        93 l-----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk  164 (298)
T 2zv2_A           93 L-----DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIK  164 (298)
T ss_dssp             C-----CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             C-----CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            7     78999999999986  57899999999 8888776433   359999999999999999999999999999999


Q ss_pred             CCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCC---C
Q 017021          173 PENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLG---W  246 (379)
Q Consensus       173 p~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~---~  246 (379)
                      |+||++                           +.++.++|+|||.+.......   ....||+.|+|||.+.+..   +
T Consensus       165 p~Nil~---------------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (298)
T 2zv2_A          165 PSNLLV---------------------------GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFS  217 (298)
T ss_dssp             GGGEEE---------------------------CTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEE
T ss_pred             HHHEEE---------------------------CCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCC
Confidence            999999                           455667888888776543322   3357899999999987655   3


Q ss_pred             CCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhcc
Q 017021          247 TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK  326 (379)
Q Consensus       247 ~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (379)
                      +.++|||||||++|+|++|..||...+.......+.......|                       .             
T Consensus       218 ~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-----------------------~-------------  261 (298)
T 2zv2_A          218 GKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFP-----------------------D-------------  261 (298)
T ss_dssp             SHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-----------------------S-------------
T ss_pred             CchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCC-----------------------C-------------
Confidence            6789999999999999999999987665444433332211111                       0             


Q ss_pred             chhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          327 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                                 ....+..+.++|.+||+.||++|||++|+++||||++
T Consensus       262 -----------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          262 -----------QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             -----------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred             -----------ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence                       1235678999999999999999999999999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-46  Score=360.76  Aligned_cols=257  Identities=25%  Similarity=0.355  Sum_probs=211.3

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      .....|++.+.||+|+||.||+|+++.+|+.||+|+++...    .....+..|..++..+     .|++|+++++++.+
T Consensus        58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-----~hp~Iv~l~~~~~~  132 (412)
T 2vd5_A           58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-----DRRWITQLHFAFQD  132 (412)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-----CTTTBCCEEEEEEC
T ss_pred             CChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-----CCCCeeeEEEEEee
Confidence            44567899999999999999999999999999999997422    2234456788888776     78999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+..|+||||+ +++|.+++.+.+ ..+++..++.++.||+.||.|||+.||+||||||+||++                
T Consensus       133 ~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl----------------  195 (412)
T 2vd5_A          133 ENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL----------------  195 (412)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----------------
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeee----------------
Confidence            99999999999 999999998753 258999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhh-------CCCCCCccchHhHHHHHHHHH
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVIL-------GLGWTYPCDIWSVGCILVELC  263 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~-------~~~~~~~sDvwSlG~il~~l~  263 (379)
                                 +.++.++|+|||++.......    ...+||+.|+|||++.       ...++.++|||||||++|+|+
T Consensus       196 -----------d~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyell  264 (412)
T 2vd5_A          196 -----------DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMF  264 (412)
T ss_dssp             -----------CTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHH
T ss_pred             -----------cCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHH
Confidence                       556678888888876544332    2357999999999987       356899999999999999999


Q ss_pred             hCCCCCCCCchHHHHHHHHHHc--CCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccc
Q 017021          264 TGEALFQTHENLEHLAMMERVL--GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  341 (379)
Q Consensus       264 ~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (379)
                      +|+.||.+.+..+....+....  ...|.                                              .....
T Consensus       265 tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~----------------------------------------------~~~~~  298 (412)
T 2vd5_A          265 YGQTPFYADSTAETYGKIVHYKEHLSLPL----------------------------------------------VDEGV  298 (412)
T ss_dssp             HSSCTTCCSSHHHHHHHHHTHHHHCCCC--------------------------------------------------CC
T ss_pred             hCCCCCCCCCHHHHHHHHHhcccCcCCCc----------------------------------------------cccCC
Confidence            9999999877766655443311  11110                                              01246


Q ss_pred             hhHHHHHHhhccccCCCCC---cCHHHHhcCCCCCCCC
Q 017021          342 AGDLTHLLQGLLRYDPTDR---LTAREALRHPFFTRDH  376 (379)
Q Consensus       342 ~~~~~~li~~~L~~dP~~R---pta~e~l~hp~f~~~~  376 (379)
                      +.++++||++||+ +|.+|   |+++|+++||||++.+
T Consensus       299 s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~  335 (412)
T 2vd5_A          299 PEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLD  335 (412)
T ss_dssp             CHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCC
T ss_pred             CHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCC
Confidence            7899999999999 99998   5999999999998754

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=1e-46  Score=370.06  Aligned_cols=257  Identities=30%  Similarity=0.497  Sum_probs=216.8

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ...|++.++||+|+||+||+|+++.+++.||+|++...   ......+.+|+.++.++     .|+||+++++++.+.+.
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~   95 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-----DHPNIMKLFEILEDSSS   95 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-----CCTTBCCEEEEEECSSE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhC-----CCCCcCeEEEEEEcCCE
Confidence            35689999999999999999999999999999998632   23456677899999998     78999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||+.||+||||||+||+++..                
T Consensus        96 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~----------------  157 (486)
T 3mwu_A           96 FYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK----------------  157 (486)
T ss_dssp             EEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSS----------------
T ss_pred             EEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecC----------------
Confidence            99999999 899999987754  69999999999999999999999999999999999999532                


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                              ..+..++|+|||.+.......  ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..
T Consensus       158 --------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  228 (486)
T 3mwu_A          158 --------EKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY  228 (486)
T ss_dssp             --------STTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             --------CCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                    345679999999887554433  34579999999999877 5899999999999999999999999988777


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.......+..                                             .+...++++.+||.+||+.
T Consensus       229 ~~~~~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~~li~~~L~~  263 (486)
T 3mwu_A          229 DILKRVETGKYAFDLP---------------------------------------------QWRTISDDAKDLIRKMLTF  263 (486)
T ss_dssp             HHHHHHHHTCCCSCSG---------------------------------------------GGGGSCHHHHHHHHHHTCS
T ss_pred             HHHHHHHhCCCCCCCc---------------------------------------------ccCCCCHHHHHHHHHHcCC
Confidence            7666555533322211                                             1234678899999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||.+|||+.|+|+||||+..
T Consensus       264 dp~~R~t~~~~l~hp~~~~~  283 (486)
T 3mwu_A          264 HPSLRITATQCLEHPWIQKY  283 (486)
T ss_dssp             STTTSCCHHHHHHCHHHHHT
T ss_pred             ChhhCcCHHHHhcCHhhccC
Confidence            99999999999999999753

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.9e-46  Score=348.83  Aligned_cols=254  Identities=25%  Similarity=0.418  Sum_probs=209.3

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ..|+..++||+|+||.||+|+++.+|+.||+|++.... .....+.+|+.++..+     .|+|++++++++...+..++
T Consensus        45 ~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~l  119 (321)
T 2c30_A           45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-----QHFNVVEMYKSYLVGEELWV  119 (321)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTC-----CCTTBCCEEEEEEETTEEEE
T ss_pred             hhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhC-----CCCCcceEEEEEEECCEEEE
Confidence            34666689999999999999999999999999997432 2345567788888777     78999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      ||||+ +++|.+++...   .+++..+..++.|++.||.|||+.|++||||||+||++                      
T Consensus       120 v~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll----------------------  174 (321)
T 2c30_A          120 LMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL----------------------  174 (321)
T ss_dssp             EECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----------------------
T ss_pred             EEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----------------------
Confidence            99999 89999998754   48999999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                           +.++.++|+|||.+......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+.
T Consensus       175 -----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~  249 (321)
T 2c30_A          175 -----TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA  249 (321)
T ss_dssp             -----CTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred             -----CCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                 45566888888877654332   2345799999999999998899999999999999999999999987766554


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.....+...                                              .....++.+.++|.+||+.||
T Consensus       250 ~~~~~~~~~~~~~----------------------------------------------~~~~~~~~l~~li~~~l~~dp  283 (321)
T 2c30_A          250 MKRLRDSPPPKLK----------------------------------------------NSHKVSPVLRDFLERMLVRDP  283 (321)
T ss_dssp             HHHHHHSSCCCCT----------------------------------------------TGGGSCHHHHHHHHHHSCSST
T ss_pred             HHHHhcCCCCCcC----------------------------------------------ccccCCHHHHHHHHHHccCCh
Confidence            4433332111100                                              012356789999999999999


Q ss_pred             CCCcCHHHHhcCCCCCCCCc
Q 017021          358 TDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f~~~~~  377 (379)
                      ++|||++|+++||||.+...
T Consensus       284 ~~Rps~~ell~hp~~~~~~~  303 (321)
T 2c30_A          284 QERATAQELLDHPFLLQTGL  303 (321)
T ss_dssp             TTSCCHHHHHTSGGGGGCCC
T ss_pred             hhCcCHHHHhcChhhccCCC
Confidence            99999999999999987543

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=3.1e-46  Score=346.15  Aligned_cols=273  Identities=24%  Similarity=0.398  Sum_probs=200.8

Q ss_pred             hhhhhh-hccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           43 FADKIH-SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        43 ~~y~i~-~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ..|++. +.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.++.++    ..|+||+++++++.+++..|
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~----~~h~~i~~~~~~~~~~~~~~   87 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQC----QGHRNVLELIEFFEEEDRFY   87 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHT----CCCTTBCCEEEEEEETTEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHh----cCCCCeeeEEEEEeeCCEEE
Confidence            457774 78999999999999999999999999997432 3355677888888775    26899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||+++.++                 
T Consensus        88 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~-----------------  148 (316)
T 2ac3_A           88 LVFEKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPN-----------------  148 (316)
T ss_dssp             EEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSS-----------------
T ss_pred             EEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCC-----------------
Confidence            999999 899999998754  689999999999999999999999999999999999995432                 


Q ss_pred             cccccCCCCCCeEEeecCcccccCCC----------CCcccccCCccchhhhhC-----CCCCCccchHhHHHHHHHHHh
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlG~il~~l~~  264 (379)
                             ....++|+|||.+......          .....||+.|+|||++.+     ..++.++|||||||++|+|++
T Consensus       149 -------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~  221 (316)
T 2ac3_A          149 -------QVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS  221 (316)
T ss_dssp             -------SSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHH
T ss_pred             -------CcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHH
Confidence                   2234788888877543211          123458999999999875     457899999999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |..||.+....+.....    ......    ........+..+...++                      ...+...+..
T Consensus       222 g~~pf~~~~~~~~~~~~----~~~~~~----~~~~~~~~i~~~~~~~~----------------------~~~~~~~~~~  271 (316)
T 2ac3_A          222 GYPPFVGRCGSDCGWDR----GEACPA----CQNMLFESIQEGKYEFP----------------------DKDWAHISCA  271 (316)
T ss_dssp             SSCSCCCCCCSCSCC--------CCHH----HHHHHHHHHHHCCCCCC----------------------HHHHTTSCHH
T ss_pred             CCCCCcccccccccccc----cccchh----HHHHHHHHHhccCcccC----------------------chhcccCCHH
Confidence            99999764321100000    000000    00000001111111111                      0112346788


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +.+||.+||+.||++|||++|+++||||++.
T Consensus       272 ~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  302 (316)
T 2ac3_A          272 AKDLISKLLVRDAKQRLSAAQVLQHPWVQGC  302 (316)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHHSTTCC--
T ss_pred             HHHHHHHHhhCChhhCCCHHHHhcChhhcCC
Confidence            9999999999999999999999999999864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=5.3e-47  Score=359.51  Aligned_cols=255  Identities=29%  Similarity=0.438  Sum_probs=207.7

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  123 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~  123 (379)
                      +...+.||+|+||.||+|.+..+|+.||+|+++... .....+.+|+.++..+     .|+||+++++++...+..++||
T Consensus        91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~~~~~~~~lv~  165 (373)
T 2x4f_A           91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-----DHANLIQLYDAFESKNDIVLVM  165 (373)
T ss_dssp             EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSSEEEEEE
T ss_pred             eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhC-----CCCCCCeEEEEEEECCEEEEEE
Confidence            334678999999999999999999999999997532 3455677888888877     7899999999999999999999


Q ss_pred             eCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          124 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       124 e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      ||+ +++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||++..                      
T Consensus       166 E~~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~----------------------  222 (373)
T 2x4f_A          166 EYVDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN----------------------  222 (373)
T ss_dssp             ECCTTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE----------------------
T ss_pred             eCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEec----------------------
Confidence            999 899999887643 35899999999999999999999999999999999999953                      


Q ss_pred             ccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          203 KRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                         +....++|+|||.+.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....
T Consensus       223 ---~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~  299 (373)
T 2x4f_A          223 ---RDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNN  299 (373)
T ss_dssp             ---TTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred             ---CCCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence               234568899999887554433  334699999999999988899999999999999999999999998877666655


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      +......++..                                             .+...++++.+||.+||+.||.+|
T Consensus       300 i~~~~~~~~~~---------------------------------------------~~~~~~~~~~~li~~~L~~dp~~R  334 (373)
T 2x4f_A          300 ILACRWDLEDE---------------------------------------------EFQDISEEAKEFISKLLIKEKSWR  334 (373)
T ss_dssp             HHHTCCCSCSG---------------------------------------------GGTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             HHhccCCCChh---------------------------------------------hhccCCHHHHHHHHHHcCCChhhC
Confidence            55433222211                                             112467789999999999999999


Q ss_pred             cCHHHHhcCCCCCCC
Q 017021          361 LTAREALRHPFFTRD  375 (379)
Q Consensus       361 pta~e~l~hp~f~~~  375 (379)
                      ||++|+++||||++.
T Consensus       335 ps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          335 ISASEALKHPWLSDH  349 (373)
T ss_dssp             CCHHHHHHSHHHHCH
T ss_pred             CCHHHHhcCcCcCCC
Confidence            999999999999864

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=1.2e-46  Score=351.54  Aligned_cols=283  Identities=27%  Similarity=0.441  Sum_probs=220.8

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ...|++.+.||+|+||.||+|++..+|+.||+|++....   .....+.+|+.++..+     .|+|++++++++...+.
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~   98 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-----RHENLVNLLEVCKKKKR   98 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETTE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhC-----CCCCEeeEEEEeecCCE
Confidence            456899999999999999999999999999999986432   2334566788888888     68999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .|+||||+ +++|.++.....  .+++..+..++.||+.||.|||+.|++||||||+||++                   
T Consensus        99 ~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~-------------------  157 (331)
T 4aaa_A           99 WYLVFEFVDHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV-------------------  157 (331)
T ss_dssp             EEEEEECCSEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE-------------------
T ss_pred             EEEEEecCCcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEE-------------------
Confidence            99999999 667776655443  59999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                              +.++.++|+|||.+.......   ....||+.|+|||.+.+. .++.++|||||||++|+|++|+.||...+
T Consensus       158 --------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  229 (331)
T 4aaa_A          158 --------SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS  229 (331)
T ss_dssp             --------CTTSCEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             --------cCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                    555678888888876433322   335689999999999875 68899999999999999999999999988


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+....+..++.....+......    .....+....              ...........+..+.+||.+||
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~li~~~L  291 (331)
T 4aaa_A          230 DIDQLYHIMMCLGNLIPRHQELFNKNPVF----AGVRLPEIKE--------------REPLERRYPKLSEVVIDLAKKCL  291 (331)
T ss_dssp             HHHHHHHHHHHHCSCCHHHHHHHHHCGGG----TTCCCCCCSS--------------CCCHHHHSTTSCHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHhCCCChhhhhHhhhcccc----ccccCccccc--------------cchhhhcccchhHHHHHHHHHHh
Confidence            88888888888887776654443322110    0011111000              00111223456789999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +.||++|||++|+|+||||+...
T Consensus       292 ~~dP~~Rpt~~ell~hp~f~~~~  314 (331)
T 4aaa_A          292 HIDPDKRPFCAELLHHDFFQMDG  314 (331)
T ss_dssp             CSSGGGSCCGGGGGGSHHHHGGG
T ss_pred             ccCcccCCCHHHHhcCchhccCC
Confidence            99999999999999999998754

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=6.5e-47  Score=371.25  Aligned_cols=256  Identities=30%  Similarity=0.487  Sum_probs=217.6

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      ...|++.+.||+|+||.||+|+++.+++.||+|++...    ......+.+|+.++.++     .|+||+++++++.+.+
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~   99 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-----DHPNIMKLYEFFEDKG   99 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSS
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEeCC
Confidence            45789999999999999999999999999999998642    23456677899888887     7899999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||+.||+||||||+||++...               
T Consensus       100 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~---------------  162 (484)
T 3nyv_A          100 YFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK---------------  162 (484)
T ss_dssp             EEEEEECCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS---------------
T ss_pred             EEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecC---------------
Confidence            999999999 999999998765  69999999999999999999999999999999999999432               


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                               ..++.++|+|||.+.......  ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.
T Consensus       163 ---------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~  232 (484)
T 3nyv_A          163 ---------SKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE  232 (484)
T ss_dssp             ---------STTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ---------CCCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH
Confidence                     355779999999987655443  23579999999999977 689999999999999999999999998887


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .+....+.+.....+..                                             .+...++.+.+||++||+
T Consensus       233 ~~~~~~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~~li~~~L~  267 (484)
T 3nyv_A          233 YDILKKVEKGKYTFELP---------------------------------------------QWKKVSESAKDLIRKMLT  267 (484)
T ss_dssp             HHHHHHHHHCCCCCCSG---------------------------------------------GGGGSCHHHHHHHHHHTC
T ss_pred             HHHHHHHHcCCCCCCCc---------------------------------------------ccccCCHHHHHHHHHHCC
Confidence            77666655533222211                                             123467889999999999


Q ss_pred             cCCCCCcCHHHHhcCCCCCC
Q 017021          355 YDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f~~  374 (379)
                      .||.+|||++|+|+||||+.
T Consensus       268 ~dp~~R~s~~e~l~h~~~~~  287 (484)
T 3nyv_A          268 YVPSMRISARDALDHEWIQT  287 (484)
T ss_dssp             SSGGGSCCHHHHHTSHHHHH
T ss_pred             CChhHCcCHHHHhhChhhcc
Confidence            99999999999999999964

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=1.3e-46  Score=342.56  Aligned_cols=254  Identities=24%  Similarity=0.425  Sum_probs=209.9

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      +....|++.+.||+|+||.||+|.+..+++.||+|++....    .....+.+|+.++..+     .|+|++++++++.+
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~   80 (279)
T 3fdn_A            6 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-----RHPNILRLYGYFHD   80 (279)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-----CCTTBCCEEEEEEC
T ss_pred             eecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-----CCCCCcchhheEec
Confidence            34457889999999999999999999999999999986432    2234456677777666     68999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+..++||||+ +++|.+.+....  .+++..+..++.||+.||.|||+.|++||||||+||++                
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili----------------  142 (279)
T 3fdn_A           81 ATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL----------------  142 (279)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEE----------------
T ss_pred             CCEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEE----------------
Confidence            99999999999 889999998764  68999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC-CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                 +.++.++|+|||.+....... ....||+.|+|||.+.+..++.++||||||+++|+|++|..||...+
T Consensus       143 -----------~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  211 (279)
T 3fdn_A          143 -----------GSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT  211 (279)
T ss_dssp             -----------CTTSCEEECSCCEESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             -----------cCCCCEEEEeccccccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc
Confidence                       555678888888775433332 34578999999999999889999999999999999999999998877


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.......|                                                 ...+..+.+||.+||
T Consensus       212 ~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~li~~~l  242 (279)
T 3fdn_A          212 YQETYKRISRVEFTFP-------------------------------------------------DFVTEGARDLISRLL  242 (279)
T ss_dssp             HHHHHHHHHHTCCCCC-------------------------------------------------TTSCHHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCC-------------------------------------------------CcCCHHHHHHHHHHh
Confidence            6665555544333322                                                 125678999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +.||.+|||++|+++||||+...
T Consensus       243 ~~~p~~Rps~~e~l~h~~~~~~~  265 (279)
T 3fdn_A          243 KHNPSQRPMLREVLEHPWITANS  265 (279)
T ss_dssp             CSSGGGSCCHHHHHHCHHHHHHC
T ss_pred             ccChhhCCCHHHHhhCccccCCc
Confidence            99999999999999999997643

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=1.1e-46  Score=370.56  Aligned_cols=255  Identities=28%  Similarity=0.476  Sum_probs=212.1

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ..|++.++||+|+||+||+|+++.++..||+|++...   ......+.+|+.++..+     .|+||+++++++.+.+..
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~  111 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-----DHPNIMKLYDFFEDKRNY  111 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTC-----CCTTBCCEEEEEECSSEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhC-----CCCCCCeEEEEEEeCCEE
Confidence            4699999999999999999999999999999999743   22345667788888777     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +++|.+.+....  .+++..+..++.||+.||.|||+.||+||||||+||++...                 
T Consensus       112 ~lv~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-----------------  172 (494)
T 3lij_A          112 YLVMECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESK-----------------  172 (494)
T ss_dssp             EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS-----------------
T ss_pred             EEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCC-----------------
Confidence            9999999 899999887754  68999999999999999999999999999999999999532                 


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                             .....++|+|||.+.......  ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+
T Consensus       173 -------~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~  244 (494)
T 3lij_A          173 -------EKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQE  244 (494)
T ss_dssp             -------STTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             -------CCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                   234568999999887544332  34579999999999864 68999999999999999999999999888777


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.+.....+..                                             .+...++.+.+||.+||+.|
T Consensus       245 ~~~~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~~li~~~L~~d  279 (494)
T 3lij_A          245 ILRKVEKGKYTFDSP---------------------------------------------EWKNVSEGAKDLIKQMLQFD  279 (494)
T ss_dssp             HHHHHHHTCCCCCSG---------------------------------------------GGTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHhCCCCCCch---------------------------------------------hcccCCHHHHHHHHHHCCCC
Confidence            766665544333221                                             12346778999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTR  374 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~  374 (379)
                      |.+|||+.|+|+||||++
T Consensus       280 p~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          280 SQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             TTTSCCHHHHHTCHHHHH
T ss_pred             hhhCccHHHHhcCccccc
Confidence            999999999999999965

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=2.4e-46  Score=368.97  Aligned_cols=256  Identities=26%  Similarity=0.436  Sum_probs=214.5

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--------------hhhHhHHHHHHHHHHHHhcCCCCCeeE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--------------KYREAAMIEIEVLQQLAKHDKGGNRCV  107 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--------------~~~~~~~~e~~~l~~l~~~~~~~~~i~  107 (379)
                      ...|++.++||+|+||+||+|+++.+++.||+|++....              .....+.+|+.++..+     .|+||+
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv  109 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-----DHPNII  109 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-----CCTTBC
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-----CCCCCC
Confidence            457999999999999999999999999999999997432              2345677888888887     789999


Q ss_pred             EecceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccccccc
Q 017021          108 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV  186 (379)
Q Consensus       108 ~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~  186 (379)
                      ++++++.+....|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||+.||+||||||+||++...     
T Consensus       110 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-----  182 (504)
T 3q5i_A          110 KLFDVFEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENK-----  182 (504)
T ss_dssp             CEEEEEECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESST-----
T ss_pred             eEEEEEEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecC-----
Confidence            9999999999999999999 899999987754  69999999999999999999999999999999999999543     


Q ss_pred             CCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh
Q 017021          187 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~  264 (379)
                                         .....++|+|||.+.......  ....||+.|+|||++.+ .++.++|||||||++|+|++
T Consensus       183 -------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~  242 (504)
T 3q5i_A          183 -------------------NSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLC  242 (504)
T ss_dssp             -------------------TCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHH
T ss_pred             -------------------CCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHh
Confidence                               123468999999987554432  34579999999999875 68999999999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |..||.+.+..+....+.+.....+...                                             +...+++
T Consensus       243 g~~pf~~~~~~~~~~~i~~~~~~~~~~~---------------------------------------------~~~~s~~  277 (504)
T 3q5i_A          243 GYPPFGGQNDQDIIKKVEKGKYYFDFND---------------------------------------------WKNISDE  277 (504)
T ss_dssp             SSCSSCCSSHHHHHHHHHHCCCCCCHHH---------------------------------------------HTTSCHH
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCCccc---------------------------------------------cCCCCHH
Confidence            9999998887777666655433333221                                             2346788


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      +.+||++||+.||.+|||++|+|+||||++
T Consensus       278 ~~~li~~~L~~dp~~R~t~~e~l~h~~~~~  307 (504)
T 3q5i_A          278 AKELIKLMLTYDYNKRCTAEEALNSRWIKK  307 (504)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             HHHHHHHHcCCChhHCCCHHHHhcCHhhhh
Confidence            999999999999999999999999999965

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=4.5e-46  Score=340.40  Aligned_cols=256  Identities=28%  Similarity=0.403  Sum_probs=206.3

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ..|++.++||+|+||.||+|.++.+++.||+|++....  .....+.+|+.++..+     .|+|++++++++.+....+
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~   96 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-----DHPNIIKIFEVFEDYHNMY   96 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSSEEE
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhC-----CCchHHhHHHheecCCeEE
Confidence            46889999999999999999999999999999997543  2345677888888887     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      +||||+ +++|.+.+...  ....+++..+..++.||+.||.|||+.|++||||||+||++...                
T Consensus        97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~----------------  160 (285)
T 3is5_A           97 IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDT----------------  160 (285)
T ss_dssp             EEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSS----------------
T ss_pred             EEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecC----------------
Confidence            999999 88999998542  22469999999999999999999999999999999999999432                


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCC--CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                              +....++|+|||.+......  .....||+.|+|||.+.+ .++.++|||||||++|+|++|..||.+.+..
T Consensus       161 --------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~il~~ll~g~~pf~~~~~~  231 (285)
T 3is5_A          161 --------SPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE  231 (285)
T ss_dssp             --------STTCCEEECCCCCCCC----------CTTGGGCCHHHHTT-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             --------CCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhcc-CCCcccCeehHHHHHHHHHhCCCCCCCCCHH
Confidence                    34567899999988654333  234578999999999864 6889999999999999999999999876655


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +............+.                                              .....++.+.+||.+||+.
T Consensus       232 ~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~li~~~L~~  265 (285)
T 3is5_A          232 EVQQKATYKEPNYAV----------------------------------------------ECRPLTPQAVDLLKQMLTK  265 (285)
T ss_dssp             HHHHHHHHCCCCCCC------------------------------------------------CCCCHHHHHHHHHHTCS
T ss_pred             HHHhhhccCCccccc----------------------------------------------ccCcCCHHHHHHHHHHccC
Confidence            544333221111110                                              0112567899999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~  374 (379)
                      ||++|||++|+++||||++
T Consensus       266 dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          266 DPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             CTTTSCCHHHHHTSGGGGC
T ss_pred             ChhhCcCHHHHhcCHHhhc
Confidence            9999999999999999986

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=8e-47  Score=368.03  Aligned_cols=250  Identities=27%  Similarity=0.389  Sum_probs=209.7

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      -.|++.+.||+|+||.||+|++..+|+.||+|++....    .....+.+|+.++..+     .|+||+++++++...+.
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-----~HpnIv~l~~~~~~~~~   90 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-----RHPHIIKLYQVISTPSD   90 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSSE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEECCE
Confidence            46889999999999999999999999999999997432    2234566788888776     78999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .|+||||+ +++|.+++...+  .+++..+..++.||+.||.|||+.||+||||||+||++                   
T Consensus        91 ~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll-------------------  149 (476)
T 2y94_A           91 IFMVMEYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL-------------------  149 (476)
T ss_dssp             EEEEEECCSSEEHHHHTTSSS--SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEE-------------------
T ss_pred             EEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEE-------------------
Confidence            99999999 899999997654  69999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCC-CCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                              +.++.++|+|||.+.......  ...+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+.
T Consensus       150 --------~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~  221 (476)
T 2y94_A          150 --------DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV  221 (476)
T ss_dssp             --------CTTCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS
T ss_pred             --------ecCCCeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH
Confidence                    556678888888886544332  34579999999999988765 6899999999999999999999987666


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .+....+.......|                                                 ...++++.+||.+||+
T Consensus       222 ~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~Li~~~L~  252 (476)
T 2y94_A          222 PTLFKKICDGIFYTP-------------------------------------------------QYLNPSVISLLKHMLQ  252 (476)
T ss_dssp             HHHHHHHHTTCCCCC-------------------------------------------------TTCCHHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCcCCC-------------------------------------------------ccCCHHHHHHHHHHcC
Confidence            554443332211111                                                 1256789999999999


Q ss_pred             cCCCCCcCHHHHhcCCCCCCC
Q 017021          355 YDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      .||.+|||++|+++||||++.
T Consensus       253 ~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          253 VDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             SSTTTSCCHHHHHTCHHHHTT
T ss_pred             CCchhCcCHHHHHhCHHhhhc
Confidence            999999999999999999764

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1.1e-45  Score=349.58  Aligned_cols=254  Identities=30%  Similarity=0.509  Sum_probs=209.3

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---------hhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      ..|++.+.||+|+||.||+|.++.+|+.||||++....         .....+..|+.++..+.    .|+|++.+++++
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~----~hp~iv~~~~~~  169 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVA----GHPHIITLIDSY  169 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHT----TCTTBCCEEEEE
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhc----CCCCEeEEEEEE
Confidence            35888899999999999999999999999999986432         12345567888888872    578999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      ...+..|+||||+ +++|.+++....  .+++..+..++.||+.||.|||+.|++||||||+||++              
T Consensus       170 ~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~--------------  233 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL--------------  233 (365)
T ss_dssp             EBSSEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE--------------
T ss_pred             eeCCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE--------------
Confidence            9999999999999 889999998754  69999999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhC------CCCCCccchHhHHHHHHHHHh
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG------LGWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~------~~~~~~sDvwSlG~il~~l~~  264 (379)
                                   +.++.++|+|||.+.......  ....||+.|+|||++.+      ..++.++|||||||++|+|++
T Consensus       234 -------------~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~  300 (365)
T 2y7j_A          234 -------------DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA  300 (365)
T ss_dssp             -------------CTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHH
T ss_pred             -------------CCCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHH
Confidence                         555678888888776544332  34579999999999863      357899999999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |..||...+.......+.......+..                                             .+...+..
T Consensus       301 g~~pf~~~~~~~~~~~i~~~~~~~~~~---------------------------------------------~~~~~~~~  335 (365)
T 2y7j_A          301 GSPPFWHRRQILMLRMIMEGQYQFSSP---------------------------------------------EWDDRSST  335 (365)
T ss_dssp             SSCSSCCSSHHHHHHHHHHTCCCCCHH---------------------------------------------HHSSSCHH
T ss_pred             CCCCCCCCCHHHHHHHHHhCCCCCCCc---------------------------------------------ccccCCHH
Confidence            999998766655554444332222211                                             12346678


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      +.++|.+||+.||++|||++|+++||||++
T Consensus       336 ~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          336 VKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             HHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            999999999999999999999999999974

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=1.9e-46  Score=353.26  Aligned_cols=278  Identities=28%  Similarity=0.489  Sum_probs=220.4

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce-
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH-  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~-  118 (379)
                      ..|++.+.||+|+||.||+|.++.+|+.||+|++...   ......+.+|+.++..+     .|+|++++++++..... 
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   98 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-----QHENVIGLLDVFTPASSL   98 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCCSEEECSCSSG
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhc-----CCCCcccHhheEeccccc
Confidence            4688999999999999999999999999999999642   22345667788888887     68999999999987653 


Q ss_pred             -----EEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          119 -----ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       119 -----~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                           .|+||||+.++|.+++..    .+++..+..++.||+.||.|||+.|++||||||+||++               
T Consensus        99 ~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~---------------  159 (353)
T 3coi_A           99 RNFYDFYLVMPFMQTDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---------------  159 (353)
T ss_dssp             GGCCCCEEEEECCSEEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---------------
T ss_pred             ccceeEEEEeccccCCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeE---------------
Confidence                 599999998888877643    48999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                  +.++.++|+|||.+...........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.
T Consensus       160 ------------~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  227 (353)
T 3coi_A          160 ------------NEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK  227 (353)
T ss_dssp             ------------CTTCCEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS
T ss_pred             ------------CCCCcEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                        55567888888888765555555678999999999877 67899999999999999999999999998


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhh-hhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEK-YVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      +..+....+.+..+.++.+++..+...... +... ....+.                  ..........+..+.+||.+
T Consensus       228 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------------~~~~~~~~~~~~~~~~li~~  288 (353)
T 3coi_A          228 DYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS-LPQTPR------------------KDFTQLFPRASPQAADLLEK  288 (353)
T ss_dssp             CHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHT-SCBCSS------------------CCTTTTCTTSCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHh-CcCCCC------------------ccHHHhcCCcCHHHHHHHHH
Confidence            888888888888888888877665433221 1111 000000                  00011123467899999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||+.||++|||++|+++||||+.-
T Consensus       289 ~L~~dp~~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          289 MLELDVDKRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             HSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             HcCCCcccCCCHHHHhcCcchhhc
Confidence            999999999999999999999853

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=2.5e-46  Score=360.41  Aligned_cols=280  Identities=28%  Similarity=0.487  Sum_probs=219.4

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee-----
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-----  115 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~-----  115 (379)
                      ....|++.+.||+|+||.||+|+++.+|+.||||++....   ....+|++++..+     .|+||+++++++..     
T Consensus        52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l-----~hpniv~l~~~~~~~~~~~  123 (420)
T 1j1b_A           52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKK  123 (420)
T ss_dssp             EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTC-----CCTTBCCEEEEEEEEETTT
T ss_pred             ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHc-----CCCCccceeeEEeccCCCC
Confidence            3457999999999999999999999999999999987543   2334688888887     78999999888743     


Q ss_pred             -cceEEEEEeCCCCCHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          116 -RNHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       116 -~~~~~lv~e~~~~sL~~~l~~--~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                       ..++++||||+.+++.+.+..  .....+++..+..++.||+.||.|||+.||+||||||+|||++.            
T Consensus       124 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~------------  191 (420)
T 1j1b_A          124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP------------  191 (420)
T ss_dssp             TEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEET------------
T ss_pred             cceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeC------------
Confidence             235789999997788877653  22346999999999999999999999999999999999999952            


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCC--CCcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                                    ....+||+|||.++.....  .....||+.|+|||++.+. .++.++|||||||++|+|++|+.||
T Consensus       192 --------------~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf  257 (420)
T 1j1b_A          192 --------------DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF  257 (420)
T ss_dssp             --------------TTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             --------------CCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCC
Confidence                          2345788888888653322  2345789999999999764 6899999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      .+.+..+....+.+..+.++.+.+.........      ..++...          ..+    ....+....+.++.+||
T Consensus       258 ~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~------~~~p~~~----------~~~----~~~~~~~~~~~~~~~Li  317 (420)
T 1j1b_A          258 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE------FKFPQIK----------AHP----WTKVFRPRTPPEAIALC  317 (420)
T ss_dssp             CCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCC------CCCCCCC----------CCC----HHHHSCTTSCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhh------hccCccC----------CCC----HHHhcCCCCCHHHHHHH
Confidence            998888888888888888887666543221111      1111100          000    01112234578899999


Q ss_pred             hhccccCCCCCcCHHHHhcCCCCCC
Q 017021          350 QGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      .+||+.||.+|||+.|+++||||++
T Consensus       318 ~~~L~~dP~~R~t~~e~l~hp~f~~  342 (420)
T 1j1b_A          318 SRLLEYTPTARLTPLEACAHSFFDE  342 (420)
T ss_dssp             HHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             HHhccCChhHCCCHHHHhCCHhhcc
Confidence            9999999999999999999999965

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=3.6e-46  Score=378.55  Aligned_cols=255  Identities=24%  Similarity=0.336  Sum_probs=212.3

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      +....|++.+.||+|+||.||+|+++.+++.||+|+++...    ........|..++..+    .+|++++.+++++++
T Consensus       338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~----~~~~~i~~l~~~~~~  413 (674)
T 3pfq_A          338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP----GKPPFLTQLHSCFQT  413 (674)
T ss_dssp             --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCT----TCCTTBCCEEEECBC
T ss_pred             ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhc----cCCCeEEEEEEEEEe
Confidence            34456899999999999999999999999999999997432    2233445565555443    367899999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+.+|+||||+ +++|.+++...+  .+++..++.++.||+.||.|||+.||+||||||+|||+                
T Consensus       414 ~~~~~lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl----------------  475 (674)
T 3pfq_A          414 MDRLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML----------------  475 (674)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEE----------------
T ss_pred             CCEEEEEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEE----------------
Confidence            99999999999 999999998765  69999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCC---CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                 +.++.++|+|||++.....   ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus       476 -----------~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~  544 (674)
T 3pfq_A          476 -----------DSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG  544 (674)
T ss_dssp             -----------CSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -----------cCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC
Confidence                       5566788888888764222   22446799999999999999999999999999999999999999998


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .+..+....+.+.....|                                                 ...+.++.+||++
T Consensus       545 ~~~~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~  575 (674)
T 3pfq_A          545 EDEDELFQSIMEHNVAYP-------------------------------------------------KSMSKEAVAICKG  575 (674)
T ss_dssp             SSHHHHHHHHHSSCCCCC-------------------------------------------------TTSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHhCCCCCC-------------------------------------------------ccCCHHHHHHHHH
Confidence            877766655544322222                                                 1367789999999


Q ss_pred             ccccCCCCCcCH-----HHHhcCCCCCCCC
Q 017021          352 LLRYDPTDRLTA-----REALRHPFFTRDH  376 (379)
Q Consensus       352 ~L~~dP~~Rpta-----~e~l~hp~f~~~~  376 (379)
                      ||+.||++||++     +|+++||||+..+
T Consensus       576 lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~  605 (674)
T 3pfq_A          576 LMTKHPGKRLGCGPEGERDIKEHAFFRYID  605 (674)
T ss_dssp             HSCSSSTTCTTCSTTHHHHHHSSGGGSSCC
T ss_pred             HccCCHHHCCCCCCCcHHHHhcCccccCCC
Confidence            999999999997     9999999998754

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=1.5e-45  Score=342.99  Aligned_cols=285  Identities=27%  Similarity=0.444  Sum_probs=223.1

Q ss_pred             chhhhhhhhccccccceeEEEEEec-CCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee--
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDR-ERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD--  114 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~-~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~--  114 (379)
                      ....|++.+.||+|+||.||+|++. .+++.||+|++....   .......+|+.++..+..  ..|+|++++++++.  
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~h~~i~~~~~~~~~~   86 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET--FEHPNVVRLFDVCTVS   86 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHH--TCCTTBCCEEEEEEEE
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhc--cCCCCeEeeeeeeeec
Confidence            3467899999999999999999985 678999999987432   223455678888877743  25799999999887  


Q ss_pred             ---ecceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          115 ---YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       115 ---~~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                         .....++||||+.++|.+++.......+++..+..++.||+.||.|||+.|++||||||+||++             
T Consensus        87 ~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili-------------  153 (326)
T 1blx_A           87 RTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV-------------  153 (326)
T ss_dssp             ECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE-------------
T ss_pred             ccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEE-------------
Confidence               5678999999998899999988765569999999999999999999999999999999999999             


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCC
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                                    +.++.++|+|||.+.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       154 --------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  219 (326)
T 1blx_A          154 --------------TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF  219 (326)
T ss_dssp             --------------CTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             --------------cCCCCEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence                          455667888888776543222  3356899999999999888999999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      .+.+..+....+.+..+.++...|.......+.....                 .     ............+..+.+||
T Consensus       220 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~-----~~~~~~~~~~~~~~~~~~li  277 (326)
T 1blx_A          220 RGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHS-----------------K-----SAQPIEKFVTDIDELGKDLL  277 (326)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCC-----------------C-----CCCCGGGTCCSCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcc-----------------c-----CcchhhhccccCCHHHHHHH
Confidence            9988877777777776665544332211100000000                 0     00011223345778899999


Q ss_pred             hhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          350 QGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      .+||+.||++|||+.|+++||||++.+
T Consensus       278 ~~~L~~dP~~Rpt~~e~l~hp~~~~~~  304 (326)
T 1blx_A          278 LKCLTFNPAKRISAYSALSHPYFQDLE  304 (326)
T ss_dssp             HHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHHcCCCcccCCCHHHHhcCccccccc
Confidence            999999999999999999999998754

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=2.9e-46  Score=369.49  Aligned_cols=256  Identities=26%  Similarity=0.407  Sum_probs=212.8

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      .....|++.+.||+|+||.||+|+++.+|+.||+|++...    ......+..|+.++..+     .|++|+++++++.+
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-----~hp~Iv~l~~~~~~  255 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-----NSRFVVSLAYAYET  255 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-----CCTTBCCEEEEEEC
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-----CCCCEeeEEEEEee
Confidence            4556788999999999999999999999999999999742    22345567899998887     78999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+..|+||||+ |++|.+++.......+++..+..++.||+.||.|||+.||+||||||+||++                
T Consensus       256 ~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILl----------------  319 (576)
T 2acx_A          256 KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL----------------  319 (576)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----------------
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEE----------------
Confidence            99999999999 9999999987654569999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                 +.++.++|+|||++.......  ...+||+.|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus       320 -----------d~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~  388 (576)
T 2acx_A          320 -----------DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR  388 (576)
T ss_dssp             -----------CTTSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCS
T ss_pred             -----------eCCCCeEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccc
Confidence                       556678888888876544332  3357999999999999988999999999999999999999999875


Q ss_pred             ch----HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          273 EN----LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       273 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      +.    .+....+......                                                 .....++++.+|
T Consensus       389 ~~~~~~~~i~~~i~~~~~~-------------------------------------------------~p~~~s~~~~dL  419 (576)
T 2acx_A          389 KKKIKREEVERLVKEVPEE-------------------------------------------------YSERFSPQARSL  419 (576)
T ss_dssp             SSCCCHHHHHHHHHHCCCC-------------------------------------------------CCTTSCHHHHHH
T ss_pred             ccchhHHHHHHHhhccccc-------------------------------------------------CCccCCHHHHHH
Confidence            32    1122111111111                                                 112467899999


Q ss_pred             HhhccccCCCCCc-----CHHHHhcCCCCCCCC
Q 017021          349 LQGLLRYDPTDRL-----TAREALRHPFFTRDH  376 (379)
Q Consensus       349 i~~~L~~dP~~Rp-----ta~e~l~hp~f~~~~  376 (379)
                      |.+||+.||.+||     +++|+++||||+..+
T Consensus       420 I~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~  452 (576)
T 2acx_A          420 CSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN  452 (576)
T ss_dssp             HHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCC
T ss_pred             HHHhccCCHHHcCCCCCCCHHHHHhChhhccCC
Confidence            9999999999999     899999999999754

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.2e-46  Score=360.25  Aligned_cols=255  Identities=26%  Similarity=0.470  Sum_probs=197.4

Q ss_pred             hhhhh-hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee----cce
Q 017021           44 ADKIH-SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----RNH  118 (379)
Q Consensus        44 ~y~i~-~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~----~~~  118 (379)
                      .|.+. +.||+|+||+||+|.++.+++.||+|+++..    ....+|+.++.++    ..|+||+++++++..    ..+
T Consensus        62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~----~~hp~iv~l~~~~~~~~~~~~~  133 (400)
T 1nxk_A           62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRA----SQCPHIVRIVDVYENLYAGRKC  133 (400)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHH----TTSTTBCCEEEEEEEEETTEEE
T ss_pred             cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHh----cCCCCcceEeEEEeecccCCcE
Confidence            35554 6899999999999999999999999999743    3455677776555    267899999998875    678


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      +|+||||+ +++|.+++.......+++..+..++.||+.||.|||+.||+||||||+||+++..                
T Consensus       134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~----------------  197 (400)
T 1nxk_A          134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK----------------  197 (400)
T ss_dssp             EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS----------------
T ss_pred             EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecC----------------
Confidence            99999999 8899999987654569999999999999999999999999999999999999532                


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                              ..++.++|+|||++.......  ...+||+.|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus       198 --------~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  269 (400)
T 1nxk_A          198 --------RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL  269 (400)
T ss_dssp             --------STTCCEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTC
T ss_pred             --------CCCccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccc
Confidence                    225778999999887544332  3457899999999998889999999999999999999999999765432


Q ss_pred             H----HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          276 E----HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       276 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      +    ....+..                       +....+.                      ..+...+.++.+||++
T Consensus       270 ~~~~~~~~~i~~-----------------------~~~~~~~----------------------~~~~~~s~~~~~li~~  304 (400)
T 1nxk_A          270 AISPGMKTRIRM-----------------------GQYEFPN----------------------PEWSEVSEEVKMLIRN  304 (400)
T ss_dssp             SSCCSHHHHHHH-----------------------TCCCCCT----------------------TTTTTSCHHHHHHHHT
T ss_pred             cccHHHHHHHHc-----------------------CcccCCC----------------------cccccCCHHHHHHHHH
Confidence            1    1111111                       1111110                      0123467889999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||+.||.+|||++|+++||||.+.
T Consensus       305 ~L~~dP~~Rpt~~eil~hp~~~~~  328 (400)
T 1nxk_A          305 LLKTEPTQRMTITEFMNHPWIMQS  328 (400)
T ss_dssp             TSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HCCCChhHCcCHHHHhcCccccCC
Confidence            999999999999999999999754

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=3.3e-46  Score=340.43  Aligned_cols=258  Identities=24%  Similarity=0.430  Sum_probs=212.6

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch-------hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      -.|++.+.||+|+||.||+|.++.+++.||+|+++....       ....+.+|+.++..+     .|+|++++++++..
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~   79 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-----RHPNIITLHDIFEN   79 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-----CCTTBCCEEEEEEC
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-----CCCCeeehhheecC
Confidence            468899999999999999999999999999999874321       245677899999888     68999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+..++||||+ +++|.+++....  .+++..+..++.||+.||.|||+.|++||||||+||+++.++            
T Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~------------  145 (283)
T 3bhy_A           80 KTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKN------------  145 (283)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS------------
T ss_pred             CCeEEEEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCC------------
Confidence            99999999999 899999997754  689999999999999999999999999999999999995432            


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                 .....++|+|||.+.......  ....||+.|+|||.+.+..++.++||||||+++|+|++|..||.+.
T Consensus       146 -----------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  214 (283)
T 3bhy_A          146 -----------VPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE  214 (283)
T ss_dssp             -----------SSSCCEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             -----------CCCCceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc
Confidence                       233478999999887544332  3346899999999999889999999999999999999999999887


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+....+.......+..                                             .....+..+.++|.+|
T Consensus       215 ~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~li~~~  249 (283)
T 3bhy_A          215 TKQETLTNISAVNYDFDEE---------------------------------------------YFSNTSELAKDFIRRL  249 (283)
T ss_dssp             SHHHHHHHHHTTCCCCCHH---------------------------------------------HHTTCCHHHHHHHHTT
T ss_pred             chHHHHHHhHhcccCCcch---------------------------------------------hcccCCHHHHHHHHHH
Confidence            6655544443322222211                                             1234567899999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      |+.||++|||++|+++||||+..
T Consensus       250 l~~dp~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          250 LVKDPKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             SCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             ccCCHhHCcCHHHHHhCHHHHHH
Confidence            99999999999999999999764

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=5.7e-46  Score=355.11  Aligned_cols=281  Identities=30%  Similarity=0.496  Sum_probs=219.1

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec---
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---  116 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~---  116 (379)
                      .....|++.+.||+|+||.||+|++..+++ ||+|++.....   ...+|+.++..+     .|+||+++++++...   
T Consensus        37 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~---~~~~E~~il~~l-----~h~niv~l~~~~~~~~~~  107 (394)
T 4e7w_A           37 QREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR---FKNRELQIMRIV-----KHPNVVDLKAFFYSNGDK  107 (394)
T ss_dssp             EEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT---SCCHHHHHHHTC-----CCTTBCCEEEEEEEESSS
T ss_pred             cccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc---hHHHHHHHHHhC-----CCCCcceEEEEEEecCCC
Confidence            345579999999999999999999888776 88888764332   223588888887     789999999998543   


Q ss_pred             ---ceEEEEEeCCCCCHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          117 ---NHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       117 ---~~~~lv~e~~~~sL~~~l~~--~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                         .+.++||||+.+++.+.+..  .....+++..+..++.||+.||.|||+.||+||||||+||+++            
T Consensus       108 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~------------  175 (394)
T 4e7w_A          108 KDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD------------  175 (394)
T ss_dssp             SSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE------------
T ss_pred             CCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEc------------
Confidence               34899999997666665542  1224699999999999999999999999999999999999994            


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCC--CCCcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCC
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP--DQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                                    ..++.++|+|||.+.....  ......||+.|+|||++.+. .++.++|||||||++|+|++|+.|
T Consensus       176 --------------~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~p  241 (394)
T 4e7w_A          176 --------------PPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPL  241 (394)
T ss_dssp             --------------TTTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             --------------CCCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                          1456788888888865332  22445789999999998765 589999999999999999999999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |.+.+..+....+.+..+.++.+.+.......   ..........                 ...........++++.+|
T Consensus       242 f~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~---~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l  301 (394)
T 4e7w_A          242 FPGESGIDQLVEIIKVLGTPSREQIKTMNPNY---MEHKFPQIRP-----------------HPFSKVFRPRTPPDAIDL  301 (394)
T ss_dssp             SCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGG---SSSCCCCCCC-----------------CCHHHHSCTTCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh---hhhccccccC-----------------CcHHHhccccCCHHHHHH
Confidence            99999989999999999988887666543221   1111111100                 011112233467899999


Q ss_pred             HhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          349 LQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      |.+||+.||.+|||+.|+++||||++-
T Consensus       302 i~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (394)
T 4e7w_A          302 ISRLLEYTPSARLTAIEALCHPFFDEL  328 (394)
T ss_dssp             HHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred             HHHHhCCChhhCCCHHHHhcChhhhhh
Confidence            999999999999999999999999864

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.5e-45  Score=348.20  Aligned_cols=281  Identities=24%  Similarity=0.407  Sum_probs=216.5

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch------------hhHhHHHHHHHHHHHHhcCCCCCeeEEec
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK------------YREAAMIEIEVLQQLAKHDKGGNRCVQIR  110 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~------------~~~~~~~e~~~l~~l~~~~~~~~~i~~~~  110 (379)
                      ..|++.+.||+|+||.||+|.+.. |+.||+|++.....            ....+.+|+.++.++     .|+|+++++
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~   95 (362)
T 3pg1_A           22 SPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-----HHPNILGLR   95 (362)
T ss_dssp             CSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-----CCTTBCCCS
T ss_pred             cceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-----CCcCcccee
Confidence            468889999999999999999865 89999999863211            125677899999888     689999999


Q ss_pred             ceeee-----cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccc
Q 017021          111 NWFDY-----RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK  185 (379)
Q Consensus       111 ~~~~~-----~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~  185 (379)
                      +++..     ....|+||||++++|.+.+.... ..+++..+..++.||+.||.|||+.|++||||||+||++       
T Consensus        96 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~-------  167 (362)
T 3pg1_A           96 DIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL-------  167 (362)
T ss_dssp             EEEEECCTTTCCEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE-------
T ss_pred             eeEEeccCCCcceEEEEEccCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEE-------
Confidence            99843     34789999999889999987643 368999999999999999999999999999999999999       


Q ss_pred             cCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHH
Q 017021          186 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVEL  262 (379)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l  262 (379)
                                          +.++.++|+|||.+.......  ....||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus       168 --------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l  227 (362)
T 3pg1_A          168 --------------------ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM  227 (362)
T ss_dssp             --------------------CTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHH
T ss_pred             --------------------cCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHH
Confidence                                555678888888886433322  34578999999999877 6789999999999999999


Q ss_pred             HhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhh-hhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccc
Q 017021          263 CTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVD-RHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  341 (379)
Q Consensus       263 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (379)
                      ++|+.||.+.+..+....+.+..+.++...+.... .....+........+..                  .........
T Consensus       228 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~  289 (362)
T 3pg1_A          228 FNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPAR------------------AWTAVVPTA  289 (362)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCC------------------CHHHHSTTS
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChh------------------hHHhhCCCC
Confidence            99999999998888888888888877765544322 22222222222222110                  011223456


Q ss_pred             hhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       342 ~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ++.+.+||.+||+.||.+|||++|+++||||++.
T Consensus       290 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  323 (362)
T 3pg1_A          290 DPVALDLIAKMLEFNPQRRISTEQALRHPYFESL  323 (362)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhc
Confidence            7889999999999999999999999999999864

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=4.2e-46  Score=340.17  Aligned_cols=255  Identities=25%  Similarity=0.419  Sum_probs=211.7

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      +....|++.+.||+|+||.||+|.+..+++.||+|++....    .....+.+|+.++..+     .|+|++++++++.+
T Consensus        11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~   85 (284)
T 2vgo_A           11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-----RHPNILRMYNYFHD   85 (284)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-----CCTTBCCEEEEEEC
T ss_pred             hhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-----CCCCEeeEEEEEEc
Confidence            34457889999999999999999999999999999996432    2234566788888777     68999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+..++||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||++                
T Consensus        86 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~----------------  147 (284)
T 2vgo_A           86 RKRIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM----------------  147 (284)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE----------------
T ss_pred             CCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE----------------
Confidence            99999999999 889999998764  68999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCC-CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                 +.++.++|+|||.+...... .....||+.|+|||.+.+..++.++||||||+++|+|++|..||...+
T Consensus       148 -----------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  216 (284)
T 2vgo_A          148 -----------GYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS  216 (284)
T ss_dssp             -----------CTTCCEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             -----------cCCCCEEEecccccccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC
Confidence                       45566888888877543332 234578999999999999889999999999999999999999998766


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.......|                                                 ...+..+.++|.+||
T Consensus       217 ~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~li~~~l  247 (284)
T 2vgo_A          217 HTETHRRIVNVDLKFP-------------------------------------------------PFLSDGSKDLISKLL  247 (284)
T ss_dssp             HHHHHHHHHTTCCCCC-------------------------------------------------TTSCHHHHHHHHHHS
T ss_pred             HhHHHHHHhccccCCC-------------------------------------------------CcCCHHHHHHHHHHh
Confidence            5554433322111111                                                 135678999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          354 RYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      +.||.+|||++|+++||||+....
T Consensus       248 ~~~p~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          248 RYHPPQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             CSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred             hcCHhhCCCHHHHhhCHHHHhhcc
Confidence            999999999999999999986543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=4.4e-46  Score=343.48  Aligned_cols=258  Identities=23%  Similarity=0.389  Sum_probs=212.4

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch-hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ...|++.+.||+|+||.||+|+++.+|+.||+|+++.... ....+.+|+.++..+     .|+|++++++++.+.+..|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   82 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI-----KHENIVTLEDIYESTTHYY   82 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHC-----CCTTBCCEEEEEECSSEEE
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhC-----CCCCeeehhhhcccCCEEE
Confidence            3468899999999999999999999999999999975432 334567789988888     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||++...                  
T Consensus        83 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~------------------  142 (304)
T 2jam_A           83 LVMQLVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTP------------------  142 (304)
T ss_dssp             EEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSS------------------
T ss_pred             EEEEcCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecC------------------
Confidence            999999 889999987754  58999999999999999999999999999999999999321                  


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC-CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  278 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~  278 (379)
                            +.+..++|+|||.+....... ....||+.|+|||.+.+..++.++|||||||++|+|++|..||......+..
T Consensus       143 ------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  216 (304)
T 2jam_A          143 ------EENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLF  216 (304)
T ss_dssp             ------STTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             ------CCCCCEEEccCCcceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence                  345668888888876543322 2346899999999999888999999999999999999999999887666555


Q ss_pred             HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCC
Q 017021          279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  358 (379)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  358 (379)
                      ..+.+.....+..                                             .+...+..+.++|.+||+.||+
T Consensus       217 ~~i~~~~~~~~~~---------------------------------------------~~~~~~~~~~~li~~~l~~dp~  251 (304)
T 2jam_A          217 EKIKEGYYEFESP---------------------------------------------FWDDISESAKDFICHLLEKDPN  251 (304)
T ss_dssp             HHHHHCCCCCCTT---------------------------------------------TTTTSCHHHHHHHHHHHCSSTT
T ss_pred             HHHHcCCCCCCcc---------------------------------------------ccccCCHHHHHHHHHHcCCChh
Confidence            5444432222110                                             1124667899999999999999


Q ss_pred             CCcCHHHHhcCCCCCCC
Q 017021          359 DRLTAREALRHPFFTRD  375 (379)
Q Consensus       359 ~Rpta~e~l~hp~f~~~  375 (379)
                      +|||++|+++||||+..
T Consensus       252 ~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          252 ERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             TSCCHHHHHTSHHHHSS
T ss_pred             HCcCHHHHhcCccccCC
Confidence            99999999999999765

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.3e-45  Score=363.79  Aligned_cols=256  Identities=22%  Similarity=0.340  Sum_probs=211.0

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      .....|++.+.||+|+||.||+|+++.+|+.||+|++....    .....+..|..++..+     +|++|+.+++++.+
T Consensus       182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-----~hp~Iv~l~~~~~~  256 (543)
T 3c4z_A          182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-----HSRFIVSLAYAFET  256 (543)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-----CCTTBCCEEEEEEC
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-----CCCCEeeEEEEEee
Confidence            44567888899999999999999999999999999997432    2335567789988887     78999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNN--YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      .+..|+||||+ |++|.+++....  ...+++..+..++.||+.||.|||+.||+||||||+||++              
T Consensus       257 ~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl--------------  322 (543)
T 3c4z_A          257 KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL--------------  322 (543)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE--------------
T ss_pred             CCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEE--------------
Confidence            99999999999 899999997643  3468999999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                                   +.++.++|+|||++.......   ...+||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       323 -------------~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF  389 (543)
T 3c4z_A          323 -------------DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF  389 (543)
T ss_dssp             -------------CTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             -------------eCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCC
Confidence                         556678888888886543332   2347999999999999999999999999999999999999999


Q ss_pred             CCCch----HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          270 QTHEN----LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       270 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                      .+.+.    .+....+.......                                                 ....+..+
T Consensus       390 ~~~~~~~~~~~~~~~i~~~~~~~-------------------------------------------------p~~~s~~~  420 (543)
T 3c4z_A          390 RARGEKVENKELKQRVLEQAVTY-------------------------------------------------PDKFSPAS  420 (543)
T ss_dssp             CCTTCCCCHHHHHHHHHHCCCCC-------------------------------------------------CTTSCHHH
T ss_pred             CCCccchhHHHHHHHHhhcccCC-------------------------------------------------CcccCHHH
Confidence            86532    22222222111111                                                 12367889


Q ss_pred             HHHHhhccccCCCCCcC-----HHHHhcCCCCCCCC
Q 017021          346 THLLQGLLRYDPTDRLT-----AREALRHPFFTRDH  376 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rpt-----a~e~l~hp~f~~~~  376 (379)
                      .+||++||+.||.+||+     ++++++||||++..
T Consensus       421 ~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~  456 (543)
T 3c4z_A          421 KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS  456 (543)
T ss_dssp             HHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCC
T ss_pred             HHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCC
Confidence            99999999999999995     69999999999753

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=1.5e-45  Score=337.53  Aligned_cols=262  Identities=22%  Similarity=0.373  Sum_probs=207.9

Q ss_pred             eeeeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEec
Q 017021           34 LITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIR  110 (379)
Q Consensus        34 ~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~  110 (379)
                      ....+...+..|++.+.||+|+||.||+|.+..++..||+|++...   ......+.+|+.++..+     .|+|+++++
T Consensus        17 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~   91 (290)
T 1t4h_A           17 KAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-----QHPNIVRFY   91 (290)
T ss_dssp             -CCEECTTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-----CCTTBCCEE
T ss_pred             hhhhcccCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhC-----CCCCeeeee
Confidence            3444566677799999999999999999999999999999998743   23345566788887777     789999999


Q ss_pred             ceeee----cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecccc
Q 017021          111 NWFDY----RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEY  183 (379)
Q Consensus       111 ~~~~~----~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--iiH~dlkp~Nili~~~~~  183 (379)
                      +++..    ....++||||+ +++|.+++....  .+++..+..++.||+.||.|||+.|  ++||||||+||+++    
T Consensus        92 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~----  165 (290)
T 1t4h_A           92 DSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT----  165 (290)
T ss_dssp             EEEEEESSSCEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES----
T ss_pred             eeeccccCCCceEEEEEEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE----
Confidence            98865    46799999999 889999998754  6899999999999999999999999  99999999999993    


Q ss_pred             cccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-CcccccCCccchhhhhCCCCCCccchHhHHHHHHHH
Q 017021          184 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL  262 (379)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l  262 (379)
                                            ..++.++|+|||.+....... ....||+.|+|||++.+ .++.++|||||||++|+|
T Consensus       166 ----------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l  222 (290)
T 1t4h_A          166 ----------------------GPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEM  222 (290)
T ss_dssp             ----------------------STTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHH
T ss_pred             ----------------------CCCCCEEEeeCCCcccccccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHH
Confidence                                  145678888998886544433 33568999999998875 589999999999999999


Q ss_pred             HhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccch
Q 017021          263 CTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  342 (379)
Q Consensus       263 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (379)
                      ++|+.||.............. .+..+.                                             ......+
T Consensus       223 ~~g~~pf~~~~~~~~~~~~~~-~~~~~~---------------------------------------------~~~~~~~  256 (290)
T 1t4h_A          223 ATSEYPYSECQNAAQIYRRVT-SGVKPA---------------------------------------------SFDKVAI  256 (290)
T ss_dssp             HHSSCTTTTCSSHHHHHHHHT-TTCCCG---------------------------------------------GGGGCCC
T ss_pred             HhCCCCCCCcCcHHHHHHHHh-ccCCcc---------------------------------------------ccCCCCC
Confidence            999999987544332211110 011110                                             1122355


Q ss_pred             hHHHHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       343 ~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +++.++|.+||+.||.+|||++|+++||||+++
T Consensus       257 ~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          257 PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence            789999999999999999999999999999986

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=6.9e-46  Score=348.68  Aligned_cols=255  Identities=26%  Similarity=0.360  Sum_probs=209.0

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      ....|++.+.||+|+||.||+|++..+++.||+|++....    .....+.+|+.++..+     .|+|++++++++..+
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~  126 (348)
T 1u5q_A           52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-----RHPNTIQYRGCYLRE  126 (348)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEET
T ss_pred             hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEEC
Confidence            3456888999999999999999999999999999997432    2234567899998888     789999999999999


Q ss_pred             ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          117 NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       117 ~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      +..++||||+.++|.+++.... ..+++..+..++.|++.||.|||+.||+||||||+||+++                 
T Consensus       127 ~~~~lv~e~~~g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-----------------  188 (348)
T 1u5q_A          127 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS-----------------  188 (348)
T ss_dssp             TEEEEEEECCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE-----------------
T ss_pred             CeEEEEEecCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC-----------------
Confidence            9999999999888988886543 3689999999999999999999999999999999999994                 


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhh---CCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                .++.++|+|||.+...... ....||+.|+|||++.   +..++.++|||||||++|+|++|+.||...+
T Consensus       189 ----------~~~~~kL~DfG~a~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~  257 (348)
T 1u5q_A          189 ----------EPGLVKLGDFGSASIMAPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  257 (348)
T ss_dssp             ----------TTTEEEECCCTTCBSSSSB-CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             ----------CCCCEEEeeccCceecCCC-CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                      4556788888877654432 3457899999999985   4568899999999999999999999998776


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.+...+..                                               ....++..+.+||.+||
T Consensus       258 ~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~l~~li~~~l  290 (348)
T 1u5q_A          258 AMSALYHIAQNESPAL-----------------------------------------------QSGHWSEYFRNFVDSCL  290 (348)
T ss_dssp             HHHHHHHHHHSCCCCC-----------------------------------------------CCTTSCHHHHHHHHHHT
T ss_pred             hHHHHHHHHhcCCCCC-----------------------------------------------CCCCCCHHHHHHHHHHc
Confidence            6554443333211110                                               01135678999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +.||++|||++|+++||||....
T Consensus       291 ~~dP~~Rps~~~ll~h~~~~~~~  313 (348)
T 1u5q_A          291 QKIPQDRPTSEVLLKHRFVLRER  313 (348)
T ss_dssp             CSSGGGSCCHHHHTTCHHHHSCC
T ss_pred             ccChhhCcCHHHHhhChhhhccC
Confidence            99999999999999999997653

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.5e-46  Score=339.51  Aligned_cols=252  Identities=24%  Similarity=0.423  Sum_probs=183.9

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch----hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ..|++.+.||+|+||.||+|++..+++.||+|++.....    ....+.+|+.++..+     .|+|++++++++.+.+.
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   85 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-----KHPSILELYNYFEDSNY   85 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-----CCTTBCCEEEEEECSSE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-----CCCCeEeEEEEEccCCe
Confidence            468899999999999999999999999999999974321    234566788777776     68999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||++                   
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili-------------------  145 (278)
T 3cok_A           86 VYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL-------------------  145 (278)
T ss_dssp             EEEEEECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEE-------------------
T ss_pred             EEEEEecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE-------------------
Confidence            99999999 889999998753 368999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                              +.++.++|+|||.+.......   ....||+.|+|||.+.+..++.++||||||+++|+|++|+.||.....
T Consensus       146 --------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  217 (278)
T 3cok_A          146 --------TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTV  217 (278)
T ss_dssp             --------CTTCCEEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSC
T ss_pred             --------cCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhH
Confidence                    455678888888776543222   235689999999999988899999999999999999999999976443


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .+....+   .                    ......                          ....+.++.++|.+||+
T Consensus       218 ~~~~~~~---~--------------------~~~~~~--------------------------~~~~~~~~~~li~~~l~  248 (278)
T 3cok_A          218 KNTLNKV---V--------------------LADYEM--------------------------PSFLSIEAKDLIHQLLR  248 (278)
T ss_dssp             C-----C---C--------------------SSCCCC--------------------------CTTSCHHHHHHHHHHSC
T ss_pred             HHHHHHH---h--------------------hcccCC--------------------------ccccCHHHHHHHHHHcc
Confidence            2211100   0                    000000                          12356789999999999


Q ss_pred             cCCCCCcCHHHHhcCCCCCCCC
Q 017021          355 YDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      .||++|||++|+++||||.+..
T Consensus       249 ~dp~~Rps~~~~l~h~~~~~~~  270 (278)
T 3cok_A          249 RNPADRLSLSSVLDHPFMSRNS  270 (278)
T ss_dssp             SSGGGSCCHHHHTTSTTTC---
T ss_pred             cCHhhCCCHHHHhcCccccCCC
Confidence            9999999999999999998754

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=1.5e-46  Score=361.97  Aligned_cols=259  Identities=29%  Similarity=0.450  Sum_probs=201.1

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---------hhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      ..|++.+.||+|+||.||+|.++.+++.||+|++....         .....+.+|+.++.++     .|+|++++++++
T Consensus       135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~l~~~~  209 (419)
T 3i6u_A          135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-----NHPCIIKIKNFF  209 (419)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-----CCTTBCCCCEEE
T ss_pred             ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-----CCCCEeeEEEEE
Confidence            46889999999999999999999999999999997432         1123466799999988     789999999998


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      ..+ ..|+||||+ +++|.+++....  .+++..+..++.|++.||+|||+.||+||||||+||+++..           
T Consensus       210 ~~~-~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~-----------  275 (419)
T 3i6u_A          210 DAE-DYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ-----------  275 (419)
T ss_dssp             ESS-EEEEEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS-----------
T ss_pred             ecC-ceEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecC-----------
Confidence            654 579999999 889988886654  69999999999999999999999999999999999999532           


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhC---CCCCCccchHhHHHHHHHHHhCCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                                   ..+..++|+|||.+.......  ....||+.|+|||++.+   ..++.++|||||||++|+|++|..
T Consensus       276 -------------~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~  342 (419)
T 3i6u_A          276 -------------EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP  342 (419)
T ss_dssp             -------------SSSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSC
T ss_pred             -------------CCcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence                         234568999999987654433  34579999999999853   567889999999999999999999


Q ss_pred             CCCCCchH-HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          268 LFQTHENL-EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       268 pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      ||...... .....+.......+                                             ...+...+..+.
T Consensus       343 pf~~~~~~~~~~~~i~~~~~~~~---------------------------------------------~~~~~~~~~~~~  377 (419)
T 3i6u_A          343 PFSEHRTQVSLKDQITSGKYNFI---------------------------------------------PEVWAEVSEKAL  377 (419)
T ss_dssp             SSCCCSSSCCHHHHHHTTCCCCC---------------------------------------------HHHHTTSCHHHH
T ss_pred             CCCCCcchHHHHHHHhcCCCCCC---------------------------------------------chhhcccCHHHH
Confidence            99764332 11111111111111                                             112334678899


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCCCCCCcC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFFTRDHLR  378 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~~  378 (379)
                      +||.+||+.||.+|||++|+|+||||++.+.+
T Consensus       378 ~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~~  409 (419)
T 3i6u_A          378 DLVKKLLVVDPKARFTTEEALRHPWLQDEDMK  409 (419)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHHSGGGCCHHHH
T ss_pred             HHHHHHccCChhHCcCHHHHhCCcccCChhHH
Confidence            99999999999999999999999999986543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=3.3e-45  Score=336.29  Aligned_cols=257  Identities=29%  Similarity=0.481  Sum_probs=211.6

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----------hhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      ...|++.+.||+|+||.||+|.++.+++.||+|++....          .....+.+|+.++.++.    +|+|++++++
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~----~h~~i~~~~~   91 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS----GHPNIIQLKD   91 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHT----TCTTBCCEEE
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhc----CCCCEeeeee
Confidence            356889999999999999999999999999999996432          22355667888888872    4789999999


Q ss_pred             eeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCc
Q 017021          112 WFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                      ++...+..++||||+ +++|.+++....  .+++..+..++.||+.||.|||+.|++||||||+||++            
T Consensus        92 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~------------  157 (298)
T 1phk_A           92 TYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL------------  157 (298)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE------------
T ss_pred             eeccCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE------------
Confidence            999999999999999 889999998754  68999999999999999999999999999999999999            


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhh------CCCCCCccchHhHHHHHHHH
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVIL------GLGWTYPCDIWSVGCILVEL  262 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~------~~~~~~~sDvwSlG~il~~l  262 (379)
                                     +.++.++|+|||.+.......  ....||+.|+|||++.      ...++.++||||||+++|+|
T Consensus       158 ---------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l  222 (298)
T 1phk_A          158 ---------------DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL  222 (298)
T ss_dssp             ---------------CTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHH
T ss_pred             ---------------cCCCcEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHH
Confidence                           455668888888776544332  3356899999999985      45678999999999999999


Q ss_pred             HhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccch
Q 017021          263 CTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  342 (379)
Q Consensus       263 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (379)
                      ++|..||...+..+....+.......+..                                             .+...+
T Consensus       223 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~  257 (298)
T 1phk_A          223 LAGSPPFWHRKQMLMLRMIMSGNYQFGSP---------------------------------------------EWDDYS  257 (298)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHTCCCCCTT---------------------------------------------TGGGSC
T ss_pred             HHCCCCCcCccHHHHHHHHhcCCcccCcc---------------------------------------------cccccC
Confidence            99999998776655544443322221110                                             112466


Q ss_pred             hHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       343 ~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ..+.++|.+||+.||.+|||++|+++||||++..
T Consensus       258 ~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          258 DTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            7899999999999999999999999999998754

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.1e-45  Score=342.59  Aligned_cols=281  Identities=25%  Similarity=0.416  Sum_probs=214.6

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee-------
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD-------  114 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~-------  114 (379)
                      ..|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.++..+     .|+|++++++++.       
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~~   85 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL-----DHDNIVKVFEILGPSGSQLT   85 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEECTTSCBCC
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhc-----CCCCeeEEEEeccccccccc
Confidence            46899999999999999999999999999999987432 3345667888888887     7899999988763       


Q ss_pred             -------ecceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccC
Q 017021          115 -------YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  187 (379)
Q Consensus       115 -------~~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~  187 (379)
                             .....|+||||++++|.+++...   .+++..+..++.|++.||+|||+.|++||||||+||+++.       
T Consensus        86 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~-------  155 (320)
T 2i6l_A           86 DDVGSLTELNSVYIVQEYMETDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT-------  155 (320)
T ss_dssp             C----CCSCSEEEEEEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET-------
T ss_pred             cccccccccCceeEEeeccCCCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC-------
Confidence                   44689999999988999998653   5899999999999999999999999999999999999952       


Q ss_pred             CCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC------CCcccccCCccchhhhhC-CCCCCccchHhHHHHHH
Q 017021          188 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILV  260 (379)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~  260 (379)
                                         .+..++|+|||.+......      .....+|..|+|||.+.+ ..++.++|||||||++|
T Consensus       156 -------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~  216 (320)
T 2i6l_A          156 -------------------EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFA  216 (320)
T ss_dssp             -------------------TTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHH
T ss_pred             -------------------CCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHH
Confidence                               3356778888877654322      123457899999999876 67899999999999999


Q ss_pred             HHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc
Q 017021          261 ELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  340 (379)
Q Consensus       261 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (379)
                      +|++|+.||.+.+..+....+.+..+......+.........+...... .+                  ..........
T Consensus       217 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------------~~~~~~~~~~  277 (320)
T 2i6l_A          217 EMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMT-EP------------------HKPLTQLLPG  277 (320)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTT-SC------------------CCCHHHHSTT
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCccccccccc-CC------------------CCChhHhcch
Confidence            9999999999988888777777777666665554433322222111000 00                  0001122345


Q ss_pred             chhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       341 ~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      .+.++.+||.+||+.||++|||++|+++||||+...
T Consensus       278 ~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (320)
T 2i6l_A          278 ISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS  313 (320)
T ss_dssp             CCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred             hhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence            788999999999999999999999999999998653

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.5e-46  Score=350.03  Aligned_cols=261  Identities=24%  Similarity=0.355  Sum_probs=209.2

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc------chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI------KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      -...|++.+.||+|+||.||+|.+..+++.||+|++...      ......+.+|+.++..+     .|+||+++++++.
T Consensus        24 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~   98 (345)
T 3hko_A           24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-----HHPNIARLYEVYE   98 (345)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-----CCTTBCCEEEEEE
T ss_pred             hhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-----CCCCcceeehhhc
Confidence            345789999999999999999999999999999998642      23346677899999888     6899999999999


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCC--------------------------------------CCCCCHHHHHHHHHHHH
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNN--------------------------------------YRSFPIDLVREIARQLL  155 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~--------------------------------------~~~l~~~~~~~~~~qi~  155 (379)
                      +.+..++||||+ +++|.+++....                                      ...+++..+..++.||+
T Consensus        99 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~  178 (345)
T 3hko_A           99 DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF  178 (345)
T ss_dssp             CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred             cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence            999999999999 999999985210                                      11246778889999999


Q ss_pred             HHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC-------CCc
Q 017021          156 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNY  228 (379)
Q Consensus       156 ~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-------~~~  228 (379)
                      .||+|||+.||+||||||+||+++.+                         ....++|+|||.+......       ...
T Consensus       179 ~~l~~LH~~~ivH~Dlkp~NIll~~~-------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  233 (345)
T 3hko_A          179 SALHYLHNQGICHRDIKPENFLFSTN-------------------------KSFEIKLVDFGLSKEFYKLNNGEYYGMTT  233 (345)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEESCS-------------------------SSCCEEECCCTTCEEGGGTTCC-------
T ss_pred             HHHHHHHHCCccccCCChhhEEEecC-------------------------CCceEEEeeccccccccccCccccccccc
Confidence            99999999999999999999999432                         2236889999988643221       134


Q ss_pred             ccccCCccchhhhhC--CCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhcc
Q 017021          229 IVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR  306 (379)
Q Consensus       229 ~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (379)
                      ..||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+....+.......+..               
T Consensus       234 ~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------  298 (345)
T 3hko_A          234 KAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENP---------------  298 (345)
T ss_dssp             -CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSG---------------
T ss_pred             cCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCc---------------
Confidence            568999999999975  678899999999999999999999998877766555444432222111               


Q ss_pred             CCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          307 GRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                                                    .....++.+.+||.+||+.||.+|||+.|+++||||++..
T Consensus       299 ------------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          299 ------------------------------NYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             ------------------------------GGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             ------------------------------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence                                          1123567899999999999999999999999999998653

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=2e-45  Score=342.74  Aligned_cols=286  Identities=24%  Similarity=0.473  Sum_probs=211.1

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee--cceE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--RNHI  119 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~--~~~~  119 (379)
                      ...|++.++||+|+||.||+|.+..+++.||+|+++..  ....+.+|+.++..+.    +|+|++.+++++..  ....
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~----~~~~i~~~~~~~~~~~~~~~  108 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR----GGPNIITLADIVKDPVSRTP  108 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHT----TSTTBCCEEEEEECTTTCCE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcC----CCCCEEEeeeeeccCCCCce
Confidence            45789999999999999999999999999999999743  3456778999999983    47899999999987  6789


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      ++||||+ +++|.+++..     +++..+..++.||+.||.|||+.||+||||||+||+++.                  
T Consensus       109 ~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~------------------  165 (330)
T 3nsz_A          109 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH------------------  165 (330)
T ss_dssp             EEEEECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET------------------
T ss_pred             EEEEeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcC------------------
Confidence            9999999 8899988743     889999999999999999999999999999999999953                  


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCCC-Cch
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQT-HEN  274 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~~-~~~  274 (379)
                              .+..++|+|||.+.......  ....||..|+|||.+.+ ..++.++|||||||++|+|++|..||.. ...
T Consensus       166 --------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~  237 (330)
T 3nsz_A          166 --------EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN  237 (330)
T ss_dssp             --------TTTEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred             --------CCCEEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch
Confidence                    22368888888886543322  34578999999999877 6689999999999999999999999954 344


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .+....+.+..+..  .....+.        .........  ..+......................++++.+||.+||+
T Consensus       238 ~~~l~~~~~~~~~~--~~~~~~~--------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  305 (330)
T 3nsz_A          238 YDQLVRIAKVLGTE--DLYDYID--------KYNIELDPR--FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR  305 (330)
T ss_dssp             HHHHHHHHHHHCHH--HHHHHHH--------HTTCCCCTH--HHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSC
T ss_pred             HHHHHHHHHhcCCc--hhhhHHH--------Hhccccccc--hhhhhhhccccchhhhccccccccCCHHHHHHHHHHhc
Confidence            44444444444421  1111111        000000000  00000000000000000011123367899999999999


Q ss_pred             cCCCCCcCHHHHhcCCCCCCCC
Q 017021          355 YDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      .||.+||||+|+|+||||++..
T Consensus       306 ~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          306 YDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             SSGGGSCCHHHHHTSGGGTTCC
T ss_pred             CCcccCCCHHHHhcCccHhhhc
Confidence            9999999999999999999764

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.6e-45  Score=345.67  Aligned_cols=257  Identities=28%  Similarity=0.448  Sum_probs=201.0

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      +.+.+..|++.+.||+|+||.||+|.+ .+++.||+|++....   .....+.+|+.++..+.+   ++++++++++++.
T Consensus         4 i~~~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~~~iv~~~~~~~   79 (343)
T 3dbq_A            4 ISVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---HSDKIIRLYDYEI   79 (343)
T ss_dssp             EESSSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT---TCTTBCCEEEEEE
T ss_pred             eeeecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhh---cCCceEEEeeeEe
Confidence            456677899999999999999999997 458899999997432   233566789999999854   3488999999999


Q ss_pred             ecceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          115 YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       115 ~~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .++..|+|||+.+++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++.               
T Consensus        80 ~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~---------------  142 (343)
T 3dbq_A           80 TDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV---------------  142 (343)
T ss_dssp             CSSEEEEEECCCSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE---------------
T ss_pred             eCCEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE---------------
Confidence            999999999977999999998865  689999999999999999999999999999999999993               


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhC-----------CCCCCccchHhHHHH
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILG-----------LGWTYPCDIWSVGCI  258 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwSlG~i  258 (379)
                                   ++.++|+|||.+.......     ....||+.|+|||++.+           ..++.++|||||||+
T Consensus       143 -------------~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~i  209 (343)
T 3dbq_A          143 -------------DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI  209 (343)
T ss_dssp             -------------TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHH
T ss_pred             -------------CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHH
Confidence                         2347888888876543332     23579999999999865           568899999999999


Q ss_pred             HHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhh
Q 017021          259 LVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV  338 (379)
Q Consensus       259 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (379)
                      +|+|++|..||.......  ..+.....+.                  ....++                          
T Consensus       210 l~ell~g~~pf~~~~~~~--~~~~~~~~~~------------------~~~~~~--------------------------  243 (343)
T 3dbq_A          210 LYYMTYGKTPFQQIINQI--SKLHAIIDPN------------------HEIEFP--------------------------  243 (343)
T ss_dssp             HHHHHHSSCTTTTCCSHH--HHHHHHHCTT------------------SCCCCC--------------------------
T ss_pred             HHHHHhCCCcchhhhhHH--HHHHHHhcCC------------------cccCCc--------------------------
Confidence            999999999997543211  1111111100                  001111                          


Q ss_pred             ccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       339 ~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      ...+..+.+||.+||+.||.+|||++|+++||||+.
T Consensus       244 ~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~  279 (343)
T 3dbq_A          244 DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  279 (343)
T ss_dssp             CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             ccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence            124467899999999999999999999999999964

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=2.9e-45  Score=341.46  Aligned_cols=249  Identities=26%  Similarity=0.329  Sum_probs=193.0

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc---
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN---  117 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~---  117 (379)
                      ..|++.+.||+|+||.||+|+++.+|+.||+|+++..  ......+.+|+.++..+     .|+||+++++++.+..   
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~~   80 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-----EHPGIVRYFNAWLETPPEK   80 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSC-----CCTTBCCEEEEEEECCSCH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEEeccch
Confidence            3588899999999999999999999999999999732  33456677898888887     7899999999875432   


Q ss_pred             ------------------------------------------------------eEEEEEeCC-CCCHHHHHHhCCC-CC
Q 017021          118 ------------------------------------------------------HICIVFEKL-GSSLYDFLRKNNY-RS  141 (379)
Q Consensus       118 ------------------------------------------------------~~~lv~e~~-~~sL~~~l~~~~~-~~  141 (379)
                                                                            +.++||||+ +++|.+++..... ..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~  160 (332)
T 3qd2_B           81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED  160 (332)
T ss_dssp             HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGG
T ss_pred             hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccc
Confidence                                                                  489999999 8999999987542 13


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccc
Q 017021          142 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY  221 (379)
Q Consensus       142 l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~  221 (379)
                      .+...+..++.||+.||.|||+.||+||||||+||+++.                           ++.++|+|||.+..
T Consensus       161 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~---------------------------~~~~kL~DfG~a~~  213 (332)
T 3qd2_B          161 REHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTM---------------------------DDVVKVGDFGLVTA  213 (332)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---------------------------TCCEEECCCTTCEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeC---------------------------CCCEEEeecCcccc
Confidence            456678999999999999999999999999999999954                           44566666666543


Q ss_pred             cCCC---------------CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHH-c
Q 017021          222 ERPD---------------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV-L  285 (379)
Q Consensus       222 ~~~~---------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~-~  285 (379)
                      ....               .....||+.|+|||++.+..++.++|||||||++|+|++|..|+.     +....+... .
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~-----~~~~~~~~~~~  288 (332)
T 3qd2_B          214 MDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM-----ERVRIITDVRN  288 (332)
T ss_dssp             CSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH-----HHHHHHHHHHT
T ss_pred             cccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh-----HHHHHHHHhhc
Confidence            3322               123468999999999999999999999999999999999866542     111111111 1


Q ss_pred             CCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHH
Q 017021          286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  365 (379)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e  365 (379)
                      +..|..                                              ....++.+.+||.+||+.||.+|||++|
T Consensus       289 ~~~~~~----------------------------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~  322 (332)
T 3qd2_B          289 LKFPLL----------------------------------------------FTQKYPQEHMMVQDMLSPSPTERPEATD  322 (332)
T ss_dssp             TCCCHH----------------------------------------------HHHHCHHHHHHHHHHHCSSGGGSCCHHH
T ss_pred             cCCCcc----------------------------------------------cccCChhHHHHHHHHccCCCCcCCCHHH
Confidence            111111                                              1124567899999999999999999999


Q ss_pred             HhcCCCCCC
Q 017021          366 ALRHPFFTR  374 (379)
Q Consensus       366 ~l~hp~f~~  374 (379)
                      +++||||++
T Consensus       323 ~l~~~~f~~  331 (332)
T 3qd2_B          323 IIENAIFEN  331 (332)
T ss_dssp             HHHSTTCCC
T ss_pred             Hhhchhhhc
Confidence            999999986

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=6.7e-46  Score=347.06  Aligned_cols=245  Identities=26%  Similarity=0.430  Sum_probs=204.7

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch---------hhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---------~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      ...|++.+.||+|+||.||+|+++.+++.||+|+++....         ....+.+|+.++..+     .|+||++++++
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~Iv~~~~~   97 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-----EHANIIKVLDI   97 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-----CCTTBCCEEEE
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-----CCCCEeeEEEE
Confidence            3478899999999999999999999999999999975321         234566799988887     78999999999


Q ss_pred             eeecceEEEEEeCC-CC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCc
Q 017021          113 FDYRNHICIVFEKL-GS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~-sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                      +.+.+..++||||+ ++ +|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++            
T Consensus        98 ~~~~~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll------------  163 (335)
T 3dls_A           98 FENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI------------  163 (335)
T ss_dssp             EECSSEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE------------
T ss_pred             EeeCCEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEE------------
Confidence            99999999999998 44 9999998765  69999999999999999999999999999999999999            


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCC-CCccchHhHHHHHHHHHhCCC
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~~l~~g~~  267 (379)
                                     +.++.++|+|||.+.......  ....||+.|+|||++.+..+ +.++|||||||++|+|++|..
T Consensus       164 ---------------~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~  228 (335)
T 3dls_A          164 ---------------AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEEN  228 (335)
T ss_dssp             ---------------CTTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSC
T ss_pred             ---------------cCCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCC
Confidence                           556678888888887544433  34568999999999988776 789999999999999999999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ||.......                             ......                          ....+.++.+
T Consensus       229 pf~~~~~~~-----------------------------~~~~~~--------------------------~~~~~~~l~~  253 (335)
T 3dls_A          229 PFCELEETV-----------------------------EAAIHP--------------------------PYLVSKELMS  253 (335)
T ss_dssp             SCSSGGGGT-----------------------------TTCCCC--------------------------SSCCCHHHHH
T ss_pred             chhhHHHHH-----------------------------hhccCC--------------------------CcccCHHHHH
Confidence            996422100                             000000                          1135678999


Q ss_pred             HHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          348 LLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||.+||+.||.+|||++|+++||||++.
T Consensus       254 li~~~L~~dP~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          254 LVSGLLQPVPERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred             HHHHHccCChhhCcCHHHHhcCccccCC
Confidence            9999999999999999999999999874

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=1.5e-45  Score=336.36  Aligned_cols=273  Identities=20%  Similarity=0.255  Sum_probs=201.8

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ...|++.+.||+|+||.||+|.++.+++.||+|++...   ........+|+..+..+    ..|+|++++++++.+.+.
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l----~~h~~iv~~~~~~~~~~~   85 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL----GQHSHVVRYFSAWAEDDH   85 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHS----CSCTTBCCEEEEEEETTE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHh----CCCCCeeeeeeeeecCCe
Confidence            34688999999999999999999999999999999743   23345556677666665    367899999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNN--YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      .++||||+ +++|.+++....  ...+++..+..++.||+.||.|||+.||+||||||+||+++..+.....+.....  
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~--  163 (289)
T 1x8b_A           86 MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDE--  163 (289)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC----------------
T ss_pred             EEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccc--
Confidence            99999999 889999997642  1358999999999999999999999999999999999999766544332222110  


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                            .........++|+|||.+....... ...||+.|+|||.+.+. .++.++|||||||++|+|++|.+|+.....
T Consensus       164 ------~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~  236 (289)
T 1x8b_A          164 ------DDWASNKVMFKIGDLGHVTRISSPQ-VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ  236 (289)
T ss_dssp             ------------CCCEEECCCTTCEETTCSC-CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH
T ss_pred             ------ccccCCceEEEEcccccccccCCcc-ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH
Confidence                  0111355679999999987655433 34689999999999775 456899999999999999999887754322


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      ..   .+.+  +..                    ..                          .....+..+.++|.+||+
T Consensus       237 ~~---~~~~--~~~--------------------~~--------------------------~~~~~~~~~~~li~~~l~  265 (289)
T 1x8b_A          237 WH---EIRQ--GRL--------------------PR--------------------------IPQVLSQEFTELLKVMIH  265 (289)
T ss_dssp             HH---HHHT--TCC--------------------CC--------------------------CSSCCCHHHHHHHHHHTC
T ss_pred             HH---HHHc--CCC--------------------CC--------------------------CCcccCHHHHHHHHHHhC
Confidence            11   1111  000                    00                          112356789999999999


Q ss_pred             cCCCCCcCHHHHhcCCCCCCCCcC
Q 017021          355 YDPTDRLTAREALRHPFFTRDHLR  378 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f~~~~~~  378 (379)
                      .||++|||++|+++||||++...|
T Consensus       266 ~dp~~Rps~~~ll~h~~~~~~~~k  289 (289)
T 1x8b_A          266 PDPERRPSAMALVKHSVLLSASRK  289 (289)
T ss_dssp             SSGGGSCCHHHHHTCTTC------
T ss_pred             CCcccCCCHHHHhhChHhhhhccC
Confidence            999999999999999999986543

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=1.8e-45  Score=337.65  Aligned_cols=253  Identities=29%  Similarity=0.424  Sum_probs=210.5

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      .....|++.+.||+|+||.||+|.++.+++.||+|++....    .....+.+|+.++..+     .|+|++++++++.+
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~   86 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-----AHQHVVGFHGFFED   86 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEEC
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-----CCCCEeeeeeeecc
Confidence            34567889999999999999999999999999999987432    2345566788888777     78999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+..++||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||++                
T Consensus        87 ~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~----------------  148 (294)
T 2rku_A           87 NDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL----------------  148 (294)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----------------
T ss_pred             CCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEE----------------
Confidence            99999999999 899999987754  68999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                 +.++.++|+|||.+......   .....||+.|+|||.+.+..++.++||||||+++|+|++|..||..
T Consensus       149 -----------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  217 (294)
T 2rku_A          149 -----------NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET  217 (294)
T ss_dssp             -----------CTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             -----------cCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                       45566788888877654322   2335689999999999988899999999999999999999999987


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      ....+....+.......|                                                 ...+..+.++|.+
T Consensus       218 ~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~li~~  248 (294)
T 2rku_A          218 SCLKETYLRIKKNEYSIP-------------------------------------------------KHINPVAASLIQK  248 (294)
T ss_dssp             SSHHHHHHHHHTTCCCCC-------------------------------------------------TTSCHHHHHHHHH
T ss_pred             CCHHHHHHHHhhccCCCc-------------------------------------------------cccCHHHHHHHHH
Confidence            665544433322111111                                                 1355688999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||+.||++|||++|+++||||++.
T Consensus       249 ~l~~~p~~Rps~~~ll~~~~~~~~  272 (294)
T 2rku_A          249 MLQTDPTARPTINELLNDEFFTSG  272 (294)
T ss_dssp             HTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred             HcccChhhCcCHHHHhhChheecC
Confidence            999999999999999999999765

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=1.9e-45  Score=344.06  Aligned_cols=253  Identities=29%  Similarity=0.424  Sum_probs=211.9

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      .....|++.+.||+|+||.||++.+..+++.||+|++....    .....+.+|+.++..+     .|+|++++++++.+
T Consensus        38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~  112 (335)
T 2owb_A           38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-----AHQHVVGFHGFFED  112 (335)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEEC
T ss_pred             ccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEec
Confidence            44567899999999999999999999999999999987432    3345666788888777     78999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+..|+||||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++                
T Consensus       113 ~~~~~lv~e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~----------------  174 (335)
T 2owb_A          113 NDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL----------------  174 (335)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----------------
T ss_pred             CCeEEEEEecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEE----------------
Confidence            99999999999 899999987754  68999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                                 +.++.++|+|||.+......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus       175 -----------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  243 (335)
T 2owb_A          175 -----------NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET  243 (335)
T ss_dssp             -----------CTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             -----------cCCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCC
Confidence                       45566888888887654322   2335689999999999998899999999999999999999999987


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      ....+....+.......|                                                 ...+..+.+||.+
T Consensus       244 ~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~li~~  274 (335)
T 2owb_A          244 SCLKETYLRIKKNEYSIP-------------------------------------------------KHINPVAASLIQK  274 (335)
T ss_dssp             SSHHHHHHHHHHTCCCCC-------------------------------------------------TTSCHHHHHHHHH
T ss_pred             CCHHHHHHHHhcCCCCCC-------------------------------------------------ccCCHHHHHHHHH
Confidence            665554443333221111                                                 1355688999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||+.||++|||++|+++||||...
T Consensus       275 ~l~~dp~~Rps~~ell~~~~~~~~  298 (335)
T 2owb_A          275 MLQTDPTARPTINELLNDEFFTSG  298 (335)
T ss_dssp             HTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred             HccCChhHCcCHHHHhcCccccCC
Confidence            999999999999999999999764

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=3.1e-45  Score=344.68  Aligned_cols=279  Identities=29%  Similarity=0.457  Sum_probs=213.0

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec----
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR----  116 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~----  116 (379)
                      ..|++.+.||+|+||.||+|.+..+|+.||+|++...  ......+.+|+.++..+     .|+|++++++++...    
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~   85 (353)
T 2b9h_A           11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-----KHENIITIFNIQRPDSFEN   85 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC-----CCTTBCCEEEECCCSCSTT
T ss_pred             cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhC-----cCCCcCCeeeeecccccCc
Confidence            4688999999999999999999999999999999632  23345566899988888     689999999877654    


Q ss_pred             -ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          117 -NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       117 -~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                       ...|+||||++++|.+++...   .+++..+..++.|++.||.|||+.|++||||||+||+++.               
T Consensus        86 ~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~---------------  147 (353)
T 2b9h_A           86 FNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS---------------  147 (353)
T ss_dssp             CCCEEEEECCCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT---------------
T ss_pred             cceEEEEEeccCccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcC---------------
Confidence             679999999988999999874   4999999999999999999999999999999999999954               


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCC-------------CCcccccCCccchhhhhC-CCCCCccchHhHHHHHHH
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------------QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVE  261 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-------------~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~  261 (379)
                                  ++.++|+|||.+......             .....||+.|+|||++.+ ..++.++|||||||++|+
T Consensus       148 ------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~  215 (353)
T 2b9h_A          148 ------------NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE  215 (353)
T ss_dssp             ------------TCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHH
T ss_pred             ------------CCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHH
Confidence                        445666666665433221             122468999999998765 678999999999999999


Q ss_pred             HHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHh-hh-hhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhc
Q 017021          262 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKR-VD-RHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD  339 (379)
Q Consensus       262 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (379)
                      |++|+.||.+.+..+....+....+.++...... .. .....+.                 ......+  .........
T Consensus       216 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~--~~~~~~~~~  276 (353)
T 2b9h_A          216 LFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYI-----------------KSLPMYP--AAPLEKMFP  276 (353)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHH-----------------HTSCCCC--CCCHHHHST
T ss_pred             HHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHh-----------------hcccCCC--Ccchhhhcc
Confidence            9999999999887777777777666554221100 00 0000000                 0000000  001122334


Q ss_pred             cchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       340 ~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ..++++.+||.+||+.||++|||++|+++||||+..
T Consensus       277 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  312 (353)
T 2b9h_A          277 RVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTY  312 (353)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             cCCHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence            678899999999999999999999999999999864

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=1.5e-45  Score=334.85  Aligned_cols=251  Identities=26%  Similarity=0.386  Sum_probs=201.2

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      .-.|++.+.||+|+||.||+|.++.+++.||+|++....    .....+.+|+..+..+     .|+|++++++++...+
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   84 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-----RHPHIIKLYQVISTPT   84 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSS
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-----CCCCEeEEEEEEecCC
Confidence            346889999999999999999999999999999997432    2234566788887776     6899999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..++||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||++                  
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~------------------  144 (276)
T 2h6d_A           85 DFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL------------------  144 (276)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEE------------------
T ss_pred             eEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEE------------------
Confidence            999999999 889999998764  68999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCC-CCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                               +.++.++|+|||.+.......  ....||+.|+|||.+.+..+ +.++||||||+++|+|++|..||....
T Consensus       145 ---------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  215 (276)
T 2h6d_A          145 ---------DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH  215 (276)
T ss_dssp             ---------CTTSCEEECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ---------CCCCCEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence                     455668888888776544332  33468999999999988765 589999999999999999999998766


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.......|                                                 ...+..+.++|.+||
T Consensus       216 ~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~l~~li~~~l  246 (276)
T 2h6d_A          216 VPTLFKKIRGGVFYIP-------------------------------------------------EYLNRSVATLLMHML  246 (276)
T ss_dssp             HHHHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHHT
T ss_pred             HHHHHHHhhcCcccCc-------------------------------------------------hhcCHHHHHHHHHHc
Confidence            5544443333221111                                                 124568899999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +.||++|||++|+++||||++.
T Consensus       247 ~~~p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          247 QVDPLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             CSSGGGSCCHHHHHHSHHHHTT
T ss_pred             cCChhhCCCHHHHHhChhhccC
Confidence            9999999999999999999865

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.4e-45  Score=341.63  Aligned_cols=258  Identities=22%  Similarity=0.375  Sum_probs=206.0

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee----
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----  115 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~----  115 (379)
                      ...-.|++.+.||+|+||.||+|++..+++.||+|++.........+.+|+.++..+    ..|+|++++++++..    
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l----~~h~~i~~~~~~~~~~~~~   96 (326)
T 2x7f_A           21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKY----SHHRNIATYYGAFIKKNPP   96 (326)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHH----CCSTTBCCEEEEEEECC--
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhc----cCCCCeeeeeeEEeeccCc
Confidence            345678999999999999999999999999999999986655667788899988887    257899999999876    


Q ss_pred             --cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          116 --RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       116 --~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                        .+..++||||+ +++|.+++.......+++..+..++.||+.||.|||+.|++||||||+||++              
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~--------------  162 (326)
T 2x7f_A           97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL--------------  162 (326)
T ss_dssp             CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE--------------
T ss_pred             cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEE--------------
Confidence              56899999999 7899999987644468999999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhh-----CCCCCCccchHhHHHHHHHHHh
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~~l~~  264 (379)
                                   +.++.++|+|||.+......   .....||+.|+|||++.     +..++.++|||||||++|+|++
T Consensus       163 -------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~  229 (326)
T 2x7f_A          163 -------------TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE  229 (326)
T ss_dssp             -------------CTTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHH
T ss_pred             -------------cCCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHh
Confidence                         45566788888877654322   23456899999999986     4568899999999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |..||...+.......+.+...+..                                               ....++..
T Consensus       230 g~~p~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~  262 (326)
T 2x7f_A          230 GAPPLCDMHPMRALFLIPRNPAPRL-----------------------------------------------KSKKWSKK  262 (326)
T ss_dssp             SSCTTTTSCHHHHHHHHHHSCCCCC-----------------------------------------------SCSCSCHH
T ss_pred             CCCCCCCCcHHHHHHHhhcCccccC-----------------------------------------------CccccCHH
Confidence            9999987665544333222111100                                               01235678


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +.++|.+||+.||.+|||++|+++||||++.
T Consensus       263 l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          263 FQSFIESCLVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             HHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             HHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence            9999999999999999999999999999864

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=7.5e-46  Score=350.05  Aligned_cols=298  Identities=21%  Similarity=0.308  Sum_probs=210.4

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      .+....|++.+.||+|+||.||+|.+..+++.||+|++...  ......+.+|+.++..+     .|+|++++++++..+
T Consensus        29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~  103 (360)
T 3eqc_A           29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-----NSPYIVGFYGAFYSD  103 (360)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC-----CCTTBCCEEEEEEET
T ss_pred             ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHC-----CCCCEEEEeEEEEEC
Confidence            34456789999999999999999999999999999999743  23345566777777766     789999999999999


Q ss_pred             ceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          117 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       117 ~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      +..++||||+ +++|.+++....  .+++..+..++.|++.||.|||+. ||+||||||+||++                
T Consensus       104 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~----------------  165 (360)
T 3eqc_A          104 GEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV----------------  165 (360)
T ss_dssp             TEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE----------------
T ss_pred             CEEEEEEECCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEE----------------
Confidence            9999999999 889999998765  689999999999999999999986 99999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCC-CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERP-DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                 +.++.++|+|||.+..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+
T Consensus       166 -----------~~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  234 (360)
T 3eqc_A          166 -----------NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD  234 (360)
T ss_dssp             -----------CTTCCEEECCCCCCHHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred             -----------CCCCCEEEEECCCCcccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                       5566788899988753221 2234578999999999999899999999999999999999999998876


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.......+.................+....+ .....+........+.    ........+.++.+||++||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~L  309 (360)
T 3eqc_A          235 AKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRP-PMAIFELLDYIVNEPP----PKLPSGVFSLEFQDFVNKCL  309 (360)
T ss_dssp             HHHHHHHHC-------------------------------CCCHHHHHHHHHHSCC----CCCCTTTSCHHHHHHHHHHH
T ss_pred             HHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCC-cccchhhhhHHhccCC----CCCCcccccHHHHHHHHHHh
Confidence            655433322211111110000000000000000000000 0000000000000000    00001235778999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +.||++|||++|+++||||++.
T Consensus       310 ~~dP~~Rpt~~ell~hp~~~~~  331 (360)
T 3eqc_A          310 IKNPAERADLKQLMVHAFIKRS  331 (360)
T ss_dssp             CSSTTTSCCHHHHHTSHHHHHH
T ss_pred             hcChhhCCCHHHHhhChHhhcc
Confidence            9999999999999999999753

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=3e-45  Score=349.57  Aligned_cols=257  Identities=27%  Similarity=0.444  Sum_probs=202.9

Q ss_pred             eeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           37 YIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        37 ~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      .+......|++.+.||+|+||.||+|.+.. ++.||+|++...   ......+.+|+.++..+.+   +|+||+++++++
T Consensus        50 ~~~~~~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~---~~~~iv~~~~~~  125 (390)
T 2zmd_A           50 CISVKGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---HSDKIIRLYDYE  125 (390)
T ss_dssp             CEEETTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT---TCTTBCCEEEEE
T ss_pred             cccccCCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHccc---CCCeEEEEEEEE
Confidence            345556679999999999999999999765 899999999643   2334567789999998854   468999999999


Q ss_pred             eecceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          114 DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       114 ~~~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      ..++.+|+|||+.+++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++.              
T Consensus       126 ~~~~~~~lv~E~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~--------------  189 (390)
T 2zmd_A          126 ITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV--------------  189 (390)
T ss_dssp             ECSSEEEEEEECCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES--------------
T ss_pred             ecCCEEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE--------------
Confidence            9999999999966999999998865  689999999999999999999999999999999999992              


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhC-----------CCCCCccchHhHHH
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILG-----------LGWTYPCDIWSVGC  257 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwSlG~  257 (379)
                                    ++.++|+|||++.......     ....||+.|+|||++.+           ..++.++|||||||
T Consensus       190 --------------~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGv  255 (390)
T 2zmd_A          190 --------------DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC  255 (390)
T ss_dssp             --------------SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHH
T ss_pred             --------------CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHH
Confidence                          2457888888876543322     23579999999999875           35889999999999


Q ss_pred             HHHHHHhCCCCCCCCchH-HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHH
Q 017021          258 ILVELCTGEALFQTHENL-EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ  336 (379)
Q Consensus       258 il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (379)
                      ++|+|++|..||...... ...   .....+.                  ....++                        
T Consensus       256 il~ell~G~~Pf~~~~~~~~~~---~~~~~~~------------------~~~~~~------------------------  290 (390)
T 2zmd_A          256 ILYYMTYGKTPFQQIINQISKL---HAIIDPN------------------HEIEFP------------------------  290 (390)
T ss_dssp             HHHHHHHSSCTTTTCCCHHHHH---HHHHCTT------------------SCCCCC------------------------
T ss_pred             HHHHHHHCCCcchhhhHHHHHH---HHHhCcc------------------ccCCCC------------------------
Confidence            999999999999764321 111   1111110                  001111                        


Q ss_pred             hhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       337 ~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                        ...+.++.+||.+||+.||.+|||+.|+++||||+.
T Consensus       291 --~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  326 (390)
T 2zmd_A          291 --DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  326 (390)
T ss_dssp             --CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             --ccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccc
Confidence              123567899999999999999999999999999964

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=2.2e-45  Score=333.72  Aligned_cols=255  Identities=24%  Similarity=0.365  Sum_probs=204.8

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ..|++.+.||+|+||.||+|.++.+++.||+|++....  .....+.+|+.++..+     .|+|++++++++.+++..|
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   81 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNIQY   81 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTC-----CCTTBCCEEEEEEETTEEE
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhc-----CCCCceeeeeEEEcCCEEE
Confidence            46889999999999999999999999999999997432  3345667788887776     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||++                     
T Consensus        82 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~---------------------  138 (276)
T 2yex_A           82 LFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---------------------  138 (276)
T ss_dssp             EEEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---------------------
T ss_pred             EEEEecCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEE---------------------
Confidence            999999 789999886543  68999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhhCCCC-CCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                            +.++.++|+|||.+......     .....||+.|+|||.+.+..+ +.++||||||+++|+|++|..||....
T Consensus       139 ------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  212 (276)
T 2yex_A          139 ------DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS  212 (276)
T ss_dssp             ------CTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSC
T ss_pred             ------ccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCc
Confidence                  45566788888877543221     133568999999999987665 688999999999999999999998654


Q ss_pred             hHHH-HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          274 NLEH-LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       274 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      .... ...........                                               ..+...+..+.++|.+|
T Consensus       213 ~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~li~~~  245 (276)
T 2yex_A          213 DSCQEYSDWKEKKTYL-----------------------------------------------NPWKKIDSAPLALLHKI  245 (276)
T ss_dssp             TTSHHHHHHHTTCTTS-----------------------------------------------TTGGGSCHHHHHHHHHH
T ss_pred             hHHHHHHHhhhccccc-----------------------------------------------CchhhcCHHHHHHHHHH
Confidence            3211 11110000000                                               01124667899999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCCCCcC
Q 017021          353 LRYDPTDRLTAREALRHPFFTRDHLR  378 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~~~~~  378 (379)
                      |+.||++|||++|+++||||++...+
T Consensus       246 l~~~p~~Rps~~~il~~~~~~~~~~~  271 (276)
T 2yex_A          246 LVENPSARITIPDIKKDRWYNKPLKK  271 (276)
T ss_dssp             SCSSTTTSCCHHHHTTCTTTTCCCC-
T ss_pred             CCCCchhCCCHHHHhcCccccChhhc
Confidence            99999999999999999999987554

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=2.9e-45  Score=335.28  Aligned_cols=259  Identities=23%  Similarity=0.399  Sum_probs=190.5

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhh--HhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR--EAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      .+....|++.+.||+|+||.||+|.+..+++.||+|++.......  .....|...+    .....|+|++++++++.++
T Consensus         3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~----~~~~~h~~iv~~~~~~~~~   78 (290)
T 3fme_A            3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS----MRTVDCPFTVTFYGALFRE   78 (290)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHH----HTTCCCTTBCCEEEEEECS
T ss_pred             cccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHH----HHhCCCCeEEEEeeeeecc
Confidence            345667899999999999999999999999999999997432222  1222222221    1223789999999999999


Q ss_pred             ceEEEEEeCCCCCHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEecccccccCCCccCC
Q 017021          117 NHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       117 ~~~~lv~e~~~~sL~~~l~~--~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      +..++||||+.++|.+++..  .....+++..+..++.|++.||.|||+. |++||||||+||++               
T Consensus        79 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~---------------  143 (290)
T 3fme_A           79 GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI---------------  143 (290)
T ss_dssp             SSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEE---------------
T ss_pred             CCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---------------
Confidence            99999999997799888764  1234699999999999999999999998 99999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhh----hCCCCCCccchHhHHHHHHHHHhCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~----~~~~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                                  +.++.++|+|||.+.......  ....||+.|+|||.+    .+..++.++|||||||++|+|++|..
T Consensus       144 ------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~  211 (290)
T 3fme_A          144 ------------NALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRF  211 (290)
T ss_dssp             ------------CTTCCEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSC
T ss_pred             ------------CCCCCEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCC
Confidence                        455567778888775433332  234689999999996    45568899999999999999999999


Q ss_pred             CCCCCch-HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          268 LFQTHEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       268 pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      ||..... ............+                      ..+                         ....+.++.
T Consensus       212 p~~~~~~~~~~~~~~~~~~~~----------------------~~~-------------------------~~~~~~~~~  244 (290)
T 3fme_A          212 PYDSWGTPFQQLKQVVEEPSP----------------------QLP-------------------------ADKFSAEFV  244 (290)
T ss_dssp             SSCCCSCHHHHHHHHHHSCCC----------------------CCC-------------------------TTTSCHHHH
T ss_pred             CccccCchHHHHHHHhccCCC----------------------Ccc-------------------------cccCCHHHH
Confidence            9976332 2222211111100                      000                         123567899


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ++|.+||+.||++|||++|+++||||+..
T Consensus       245 ~li~~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          245 DFTSQCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence            99999999999999999999999999754

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=2.7e-46  Score=354.60  Aligned_cols=265  Identities=14%  Similarity=0.093  Sum_probs=192.3

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEec----
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIR----  110 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~----  110 (379)
                      ......|++.+.||+|+||.||+|+++.+++.||+|++....    .....+.+|+.++..+..   .|+|+++++    
T Consensus        58 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~---~hp~iv~~~~~~~  134 (371)
T 3q60_A           58 SQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG---ESPEEARDRRRLL  134 (371)
T ss_dssp             TCCEEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-------------CBC
T ss_pred             CCCceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc---cChhhhhhceeEE
Confidence            334556899999999999999999999999999999998632    334555677777777754   578877654    


Q ss_pred             ---ceeeec-----------------ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHH------HHHHHHHHHHHHHHHHc
Q 017021          111 ---NWFDYR-----------------NHICIVFEKLGSSLYDFLRKNNYRSFPIDLV------REIARQLLECIAFMHDL  164 (379)
Q Consensus       111 ---~~~~~~-----------------~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~------~~~~~qi~~aL~~LH~~  164 (379)
                         +.+...                 ...|+||||+.++|.+++...+ ..++....      ..++.||+.||+|||++
T Consensus       135 ~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~  213 (371)
T 3q60_A          135 LPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSK  213 (371)
T ss_dssp             CCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eeehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHC
Confidence               333222                 4489999999999999998642 12444444      67779999999999999


Q ss_pred             CCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC-
Q 017021          165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-  243 (379)
Q Consensus       165 ~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-  243 (379)
                      ||+||||||+|||+                           +.++.++|+|||.+...........+|+.|+|||++.+ 
T Consensus       214 ~ivHrDikp~NIll---------------------------~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~  266 (371)
T 3q60_A          214 GLVHGHFTPDNLFI---------------------------MPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNAS  266 (371)
T ss_dssp             TEEETTCSGGGEEE---------------------------CTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCS
T ss_pred             CCccCcCCHHHEEE---------------------------CCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCC
Confidence            99999999999999                           55667899999988766554435567899999999987 


Q ss_pred             -CCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhh
Q 017021          244 -LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIK  322 (379)
Q Consensus       244 -~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (379)
                       ..++.++|||||||++|+|++|+.||.........                .+..............++          
T Consensus       267 ~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~----------  320 (371)
T 3q60_A          267 TATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKG----------------SWKRPSLRVPGTDSLAFG----------  320 (371)
T ss_dssp             EEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTT----------------CCCBCCTTSCCCCSCCCT----------
T ss_pred             CCCcCccccHHHHHHHHHHHHhCCCCCCCcCccccc----------------chhhhhhhhccccccchh----------
Confidence             67999999999999999999999999764321000                000000000000000000          


Q ss_pred             hhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          323 SVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                                    .....++.+.+||.+||+.||++|||++|+++||||++
T Consensus       321 --------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  358 (371)
T 3q60_A          321 --------------SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ  358 (371)
T ss_dssp             --------------TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred             --------------hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence                          11246788999999999999999999999999999975

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=2.2e-45  Score=341.53  Aligned_cols=258  Identities=29%  Similarity=0.449  Sum_probs=204.5

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---------hhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      ..|++.+.||+|+||.||+|.++.+++.||+|++....         .....+.+|+.++..+     .|+|++++++++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~   84 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-----NHPCIIKIKNFF   84 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-----CCTTBCCEEEEE
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-----CCCCCceEeeEE
Confidence            46889999999999999999999999999999986421         1223466799998888     789999999998


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      ..+. .|+||||+ +++|.+++....  .+++..+..++.||+.||.|||+.|++||||||+||+++.+           
T Consensus        85 ~~~~-~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~-----------  150 (322)
T 2ycf_A           85 DAED-YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ-----------  150 (322)
T ss_dssp             ESSS-EEEEEECCTTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS-----------
T ss_pred             cCCc-eEEEEecCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecC-----------
Confidence            7665 89999999 889999987654  68999999999999999999999999999999999999532           


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhh---CCCCCCccchHhHHHHHHHHHhCCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                                   .....++|+|||.+.......  ....||+.|+|||++.   ...++.++|||||||++|+|++|..
T Consensus       151 -------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~  217 (322)
T 2ycf_A          151 -------------EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP  217 (322)
T ss_dssp             -------------SSSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSC
T ss_pred             -------------CCCCeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence                         233459999999987654432  2346899999999974   4568899999999999999999999


Q ss_pred             CCCCCchH-HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          268 LFQTHENL-EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       268 pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      ||...... .....+........                                             ...+...+..+.
T Consensus       218 pf~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~  252 (322)
T 2ycf_A          218 PFSEHRTQVSLKDQITSGKYNFI---------------------------------------------PEVWAEVSEKAL  252 (322)
T ss_dssp             SSCSTTCSSCHHHHHHHTCCCCC---------------------------------------------HHHHTTSCHHHH
T ss_pred             CCcccchHHHHHHHHHhCccccC---------------------------------------------chhhhhcCHHHH
Confidence            99764321 11222221111111                                             112234678899


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      +||.+||+.||++|||++|+++||||++...
T Consensus       253 ~li~~~l~~dP~~Rps~~~~l~h~~~~~~~~  283 (322)
T 2ycf_A          253 DLVKKLLVVDPKARFTTEEALRHPWLQDEDM  283 (322)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHTSGGGCCHHH
T ss_pred             HHHHHHcccCHhhCCCHHHHhhCcCcCCHHH
Confidence            9999999999999999999999999987543

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=5.1e-45  Score=336.20  Aligned_cols=252  Identities=24%  Similarity=0.446  Sum_probs=204.0

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-----hhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee--eec
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF--DYR  116 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~--~~~  116 (379)
                      .|++.+.||+|+||.||+|.+..+++.||+|+++...     .....+.+|+.++..+     .|+|++++++++  ...
T Consensus         6 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~   80 (305)
T 2wtk_C            6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-----RHKNVIQLVDVLYNEEK   80 (305)
T ss_dssp             CBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-----CCTTBCCEEEEEECC--
T ss_pred             ceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-----CCCCeeEEEEEEEcCCC
Confidence            5889999999999999999999999999999997432     2345667788888777     689999999988  455


Q ss_pred             ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          117 NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       117 ~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ...|+||||+.++|.+++.......+++..+..++.||+.||.|||+.|++||||||+||++                  
T Consensus        81 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~------------------  142 (305)
T 2wtk_C           81 QKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL------------------  142 (305)
T ss_dssp             -CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE------------------
T ss_pred             CeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE------------------
Confidence            68999999996668888887655679999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCC--CCCccchHhHHHHHHHHHhCCCCC
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLG--WTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                               +.++.++|+|||.+.......     ....||+.|+|||++.+..  ++.++||||||+++|+|++|..||
T Consensus       143 ---------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~  213 (305)
T 2wtk_C          143 ---------TTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF  213 (305)
T ss_dssp             ---------CTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ---------cCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCC
Confidence                     455667777887776443221     2346899999999997654  367999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      ...+..+....+.+.....+                                                 ...+..+.++|
T Consensus       214 ~~~~~~~~~~~i~~~~~~~~-------------------------------------------------~~~~~~l~~li  244 (305)
T 2wtk_C          214 EGDNIYKLFENIGKGSYAIP-------------------------------------------------GDCGPPLSDLL  244 (305)
T ss_dssp             CCSSHHHHHHHHHHCCCCCC-------------------------------------------------SSSCHHHHHHH
T ss_pred             CCchHHHHHHHHhcCCCCCC-------------------------------------------------CccCHHHHHHH
Confidence            88766555444433211111                                                 13567899999


Q ss_pred             hhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          350 QGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      .+||+.||.+|||++|+++||||++..
T Consensus       245 ~~~l~~dp~~Rps~~~ll~~~~~~~~~  271 (305)
T 2wtk_C          245 KGMLEYEPAKRFSIRQIRQHSWFRKKH  271 (305)
T ss_dssp             HHHTCSSTTTSCCHHHHHHSHHHHSCC
T ss_pred             HHHccCChhhCCCHHHHhcCcccccCC
Confidence            999999999999999999999997653

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=6.9e-45  Score=332.69  Aligned_cols=256  Identities=30%  Similarity=0.496  Sum_probs=211.5

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ..|++.+.||+|+||.||+|+++.+++.||+|++....   .....+.+|+.++.++     .|++++++++++...+..
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   96 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-----DHPNIMKLFEILEDSSSF   96 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSSEE
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-----cCCCccEEEEEEeCCCeE
Confidence            47889999999999999999999999999999986432   2345677888888887     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      ++|||++ +++|.+.+....  .+++..+..++.||+.||.|||+.|++||||||+||+++..                 
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~-----------------  157 (287)
T 2wei_A           97 YIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK-----------------  157 (287)
T ss_dssp             EEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCS-----------------
T ss_pred             EEEEEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecC-----------------
Confidence            9999999 899999887654  68999999999999999999999999999999999999542                 


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                             .....++|+|||.+.......  ....||+.|+|||.+.+ .++.++||||||+++|+|++|..||...+..+
T Consensus       158 -------~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~  229 (287)
T 2wei_A          158 -------EKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD  229 (287)
T ss_dssp             -------STTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             -------CCcccEEEeccCcceeecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH
Confidence                   234578999999887554433  33468999999999876 48899999999999999999999998877665


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.......+.                                             ..+...+.++.++|++||+.|
T Consensus       230 ~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~li~~~l~~d  264 (287)
T 2wei_A          230 ILKRVETGKYAFDL---------------------------------------------PQWRTISDDAKDLIRKMLTFH  264 (287)
T ss_dssp             HHHHHHHCCCCCCS---------------------------------------------GGGTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHcCCCCCCc---------------------------------------------hhhhhcCHHHHHHHHHHcccC
Confidence            55444332211110                                             011235678999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~  375 (379)
                      |++|||++|+++||||++.
T Consensus       265 p~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          265 PSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             GGGSCCHHHHHHSHHHHHH
T ss_pred             hhhCcCHHHHhcCHHHhcc
Confidence            9999999999999999753

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=8.7e-45  Score=336.12  Aligned_cols=259  Identities=25%  Similarity=0.402  Sum_probs=205.1

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      .......|++.+.||+|+||.||+|.++.+|+.||+|++... .....+.+|+.++..+     .|+|++++++++...+
T Consensus        24 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   97 (314)
T 3com_A           24 TKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE-SDLQEIIKEISIMQQC-----DSPHVVKYYGSYFKNT   97 (314)
T ss_dssp             ------CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT-SCCHHHHHHHHHHHTC-----CCTTBCCEEEEEEETT
T ss_pred             hhcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch-HHHHHHHHHHHHHHhC-----CCCCCccEEEEEEeCC
Confidence            344566789999999999999999999999999999999753 3345677888888887     7899999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..|+||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||++                  
T Consensus        98 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~------------------  158 (314)
T 3com_A           98 DLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL------------------  158 (314)
T ss_dssp             EEEEEEECCTTEEHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE------------------
T ss_pred             EEEEEeecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEE------------------
Confidence            999999999 789999997533 368999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                               +.++.++|+|||.+......   .....||+.|+|||.+.+..++.++||||||+++|+|++|..||...+
T Consensus       159 ---------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  229 (314)
T 3com_A          159 ---------NTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH  229 (314)
T ss_dssp             ---------CTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             ---------CCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence                     45566788888877543322   233568999999999999889999999999999999999999998766


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      .......+.....+..                      .                        ....++..+.++|.+||
T Consensus       230 ~~~~~~~~~~~~~~~~----------------------~------------------------~~~~~~~~l~~li~~~l  263 (314)
T 3com_A          230 PMRAIFMIPTNPPPTF----------------------R------------------------KPELWSDNFTDFVKQCL  263 (314)
T ss_dssp             HHHHHHHHHHSCCCCC----------------------S------------------------SGGGSCHHHHHHHHHHT
T ss_pred             hHHHHHHHhcCCCccc----------------------C------------------------CcccCCHHHHHHHHHHc
Confidence            5443332222111000                      0                        01235678999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +.||.+|||++|+++||||+...
T Consensus       264 ~~dp~~Rpt~~~ll~~~~~~~~~  286 (314)
T 3com_A          264 VKSPEQRATATQLLQHPFVRSAK  286 (314)
T ss_dssp             CSCTTTSCCHHHHTTSHHHHTCC
T ss_pred             cCChhhCcCHHHHHhCHHHhcCC
Confidence            99999999999999999998753

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=7.5e-45  Score=334.97  Aligned_cols=254  Identities=28%  Similarity=0.405  Sum_probs=210.3

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      .....|++.+.||+|+||.||+|.+..+++.||+|++...  ......+.+|+.++..+     .|++++++++++....
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   93 (303)
T 3a7i_A           19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYVTKYYGSYLKDT   93 (303)
T ss_dssp             CGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETT
T ss_pred             ChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhC-----CCCCEeEEEEEEecCC
Confidence            3456689999999999999999999999999999999743  23346677888888887     7799999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..++||||+ +++|.+++...   .+++..+..++.|++.||.|||+.|++||||||+||++                  
T Consensus        94 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~------------------  152 (303)
T 3a7i_A           94 KLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL------------------  152 (303)
T ss_dssp             EEEEEEECCTTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE------------------
T ss_pred             eEEEEEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEE------------------
Confidence            999999999 78999998754   58999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                               +.++.++|+|||.+......   .....||+.|+|||.+.+..++.++||||||+++|+|++|..||....
T Consensus       153 ---------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  223 (303)
T 3a7i_A          153 ---------SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH  223 (303)
T ss_dssp             ---------CTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             ---------CCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC
Confidence                     45566788888877543332   234568999999999999889999999999999999999999998766


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.+...+                                                .....++..+.++|.+||
T Consensus       224 ~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~l~~li~~~l  255 (303)
T 3a7i_A          224 PMKVLFLIPKNNPP------------------------------------------------TLEGNYSKPLKEFVEACL  255 (303)
T ss_dssp             HHHHHHHHHHSCCC------------------------------------------------CCCSSCCHHHHHHHHHHC
T ss_pred             HHHHHHHhhcCCCC------------------------------------------------CCccccCHHHHHHHHHHc
Confidence            55443333221100                                                001235678999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +.||.+|||++|+++||||....
T Consensus       256 ~~dp~~Rps~~~ll~~~~~~~~~  278 (303)
T 3a7i_A          256 NKEPSFRPTAKELLKHKFILRNA  278 (303)
T ss_dssp             CSSGGGSCCHHHHTTCHHHHHHC
T ss_pred             CCChhhCcCHHHHhhChhhhcCC
Confidence            99999999999999999996543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=7.7e-45  Score=334.50  Aligned_cols=258  Identities=24%  Similarity=0.398  Sum_probs=206.5

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      .....|++.+.||+|+||.||+|.++.+++.||+|++... ......+..|+.++..+     .|+|++++++++...+.
T Consensus        16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   90 (302)
T 2j7t_A           16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-----DHPYIVKLLGAYYHDGK   90 (302)
T ss_dssp             CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHC-----CCTTBCCEEEEEECC-C
T ss_pred             CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcC-----CCCCEeeeeeeeeeCCe
Confidence            4556799999999999999999999999999999998643 23345677788888887     78999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .++||||+ +++|.+++.... ..+++..+..++.||+.||.|||+.|++||||||+||++                   
T Consensus        91 ~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~-------------------  150 (302)
T 2j7t_A           91 LWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM-------------------  150 (302)
T ss_dssp             EEEEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE-------------------
T ss_pred             EEEEEEeCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE-------------------
Confidence            99999999 889999987643 358999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccC---CCCCcccccCCccchhhhh-----CCCCCCccchHhHHHHHHHHHhCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~---~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                              +.++.++|+|||.+....   .......||+.|+|||.+.     +..++.++|||||||++|+|++|..||
T Consensus       151 --------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~  222 (302)
T 2j7t_A          151 --------TLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH  222 (302)
T ss_dssp             --------CTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             --------CCCCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCC
Confidence                    555678888888764211   1123346899999999984     567889999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      ...+..+....+.....+..                                              .....++..+.++|
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~l~~li  256 (302)
T 2j7t_A          223 HELNPMRVLLKIAKSDPPTL----------------------------------------------LTPSKWSVEFRDFL  256 (302)
T ss_dssp             TTSCHHHHHHHHHHSCCCCC----------------------------------------------SSGGGSCHHHHHHH
T ss_pred             ccCCHHHHHHHHhccCCccc----------------------------------------------CCccccCHHHHHHH
Confidence            87766554433332211100                                              00123567899999


Q ss_pred             hhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          350 QGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      .+||+.||.+|||++|+++||||++..
T Consensus       257 ~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          257 KIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             HHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             HHHcccChhhCCCHHHHhcChHHhhhc
Confidence            999999999999999999999999764

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=4e-47  Score=361.11  Aligned_cols=252  Identities=17%  Similarity=0.232  Sum_probs=194.8

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEec-----
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIR-----  110 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~-----  110 (379)
                      .....|++.+.||+|+||.||+|+++.+|+.||+|++...    ......+.+|+.++..+..  ..|+||++++     
T Consensus        70 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~--l~hpniv~~~~~~~~  147 (377)
T 3byv_A           70 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG--IKNQKQAKVHLRFIF  147 (377)
T ss_dssp             CCCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTT--CCSHHHHHHHHCBCC
T ss_pred             CCCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccc--cCCHHHHHHHhhhhh
Confidence            3456799999999999999999999999999999999632    2334566678765555432  2689998887     


Q ss_pred             --ceeeecc-----------------eEEEEEeCCCCCHHHHHHhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 017021          111 --NWFDYRN-----------------HICIVFEKLGSSLYDFLRKNNY-----RSFPIDLVREIARQLLECIAFMHDLCM  166 (379)
Q Consensus       111 --~~~~~~~-----------------~~~lv~e~~~~sL~~~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~i  166 (379)
                        ++++..+                 ..|+||||++|+|.+++.....     ..+++..+..++.||+.||+|||+.||
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  227 (377)
T 3byv_A          148 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGL  227 (377)
T ss_dssp             CSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCe
Confidence              5554442                 3899999998899999986420     123347888899999999999999999


Q ss_pred             cccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCC--
Q 017021          167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL--  244 (379)
Q Consensus       167 iH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~--  244 (379)
                      +||||||+||++                           +.++.+||+|||++...........| +.|+|||++.+.  
T Consensus       228 vHrDikp~NIll---------------------------~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~  279 (377)
T 3byv_A          228 VHTYLRPVDIVL---------------------------DQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRAT  279 (377)
T ss_dssp             ECSCCCGGGEEE---------------------------CTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTS
T ss_pred             ecCCCCHHHEEE---------------------------cCCCCEEEEechhheecCCcccCCCC-cCccChhhhccccc
Confidence            999999999999                           55567888888888765554445567 999999999887  


Q ss_pred             ---------CCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCC
Q 017021          245 ---------GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  315 (379)
Q Consensus       245 ---------~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (379)
                               .++.++|||||||++|+|++|+.||...+..+...                      .             
T Consensus       280 ~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~----------------------~-------------  324 (377)
T 3byv_A          280 ISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSE----------------------W-------------  324 (377)
T ss_dssp             THHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSG----------------------G-------------
T ss_pred             ccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchh----------------------h-------------
Confidence                     79999999999999999999999996533211000                      0             


Q ss_pred             CchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          316 ASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                                        ........++++.+||.+||+.||++|||+.|+++||||++
T Consensus       325 ------------------~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          325 ------------------IFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             ------------------GGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             ------------------hhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence                              00001246778999999999999999999999999999975

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-44  Score=341.04  Aligned_cols=255  Identities=24%  Similarity=0.389  Sum_probs=203.9

Q ss_pred             echhhhhhhhccccccceeEEEEEec---CCCceEEEEEeecc-----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGI-----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      .....|++.+.||+|+||.||+|++.   .+++.||+|+++..     ......+..|+.++..+.    +|++++.+++
T Consensus        51 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~  126 (355)
T 1vzo_A           51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR----QSPFLVTLHY  126 (355)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHH----TCTTBCCEEE
T ss_pred             ccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHcc----CCCceeEEEE
Confidence            34468999999999999999999984   58999999998642     223455667899988884    4688999999


Q ss_pred             eeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCc
Q 017021          112 WFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                      ++...+..++||||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||++            
T Consensus       127 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll------------  192 (355)
T 1vzo_A          127 AFQTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL------------  192 (355)
T ss_dssp             EEEETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE------------
T ss_pred             EEeeCceEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE------------
Confidence            999999999999999 889999998754  68999999999999999999999999999999999999            


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhC--CCCCCccchHhHHHHHHHHHh
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~~l~~  264 (379)
                                     +.++.++|+|||.+.......    ....||+.|+|||++.+  ..++.++|||||||++|+|++
T Consensus       193 ---------------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~  257 (355)
T 1vzo_A          193 ---------------DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT  257 (355)
T ss_dssp             ---------------CTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHH
T ss_pred             ---------------CCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHH
Confidence                           555678888888776433221    23579999999999985  347899999999999999999


Q ss_pred             CCCCCCCCchH----HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc
Q 017021          265 GEALFQTHENL----EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  340 (379)
Q Consensus       265 g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (379)
                      |..||......    +....+.....+.                                                 ...
T Consensus       258 g~~pf~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~  288 (355)
T 1vzo_A          258 GASPFTVDGEKNSQAEISRRILKSEPPY-------------------------------------------------PQE  288 (355)
T ss_dssp             SSCTTSCTTSCCCHHHHHHHHHHCCCCC-------------------------------------------------CTT
T ss_pred             CCCCCccCCccchHHHHHHHHhccCCCC-------------------------------------------------Ccc
Confidence            99999754321    1111111111111                                                 123


Q ss_pred             chhHHHHHHhhccccCCCCCc-----CHHHHhcCCCCCCCC
Q 017021          341 SAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFFTRDH  376 (379)
Q Consensus       341 ~~~~~~~li~~~L~~dP~~Rp-----ta~e~l~hp~f~~~~  376 (379)
                      .+..+.+||.+||+.||.+||     |++|+++||||+..+
T Consensus       289 ~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~  329 (355)
T 1vzo_A          289 MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN  329 (355)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             cCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCC
Confidence            567899999999999999999     999999999998753

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=1.4e-45  Score=341.32  Aligned_cols=253  Identities=22%  Similarity=0.298  Sum_probs=199.1

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch----hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      ...|++.+.||+|+||.||+|++..+++.||+|++.....    ....+.+|+.++..+     .|+||+++++++....
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~   85 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-----NHPAIVAVYDTGEAET   85 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-----CCTTBCCEEEEEEEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-----CCCCcceEEEeeeccC
Confidence            3468999999999999999999999999999999975322    223445566655555     7899999999987654


Q ss_pred             ----eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          118 ----HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       118 ----~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                          ..|+||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||+++             
T Consensus        86 ~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~-------------  150 (311)
T 3ork_A           86 PAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS-------------  150 (311)
T ss_dssp             TTEEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-------------
T ss_pred             CCCcccEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEc-------------
Confidence                459999999 899999998765  699999999999999999999999999999999999994             


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~  266 (379)
                                    .++.++|+|||.+.......      ....||+.|+|||++.+..++.++|||||||++|+|++|+
T Consensus       151 --------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~  216 (311)
T 3ork_A          151 --------------ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE  216 (311)
T ss_dssp             --------------TTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             --------------CCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence                          44567777777775433221      2346899999999999999999999999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||.+.+..+...........++.                                             ......+.++.
T Consensus       217 ~pf~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~l~  251 (311)
T 3ork_A          217 PPFTGDSPVSVAYQHVREDPIPPS---------------------------------------------ARHEGLSADLD  251 (311)
T ss_dssp             CSCCCSSHHHHHHHHHHCCCCCHH---------------------------------------------HHSTTCCHHHH
T ss_pred             CCCCCCChHHHHHHHhcCCCCCcc---------------------------------------------cccCCCCHHHH
Confidence            999887765554433332211111                                             11234678899


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFFT  373 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f~  373 (379)
                      ++|.+||+.||.+||++.+++.|+|++
T Consensus       252 ~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          252 AVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             HHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence            999999999999999999999999975

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.7e-44  Score=333.82  Aligned_cols=282  Identities=21%  Similarity=0.326  Sum_probs=208.1

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      .....|++.+.||+|+||.||+|++..+++.||+|+++...  .......+|+.++..+     .|+|++++++++....
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~   80 (319)
T 4euu_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-----NHKNIVKLFAIEEETT   80 (319)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-----CCTTBCCEEEEEECTT
T ss_pred             CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-----CCCCcceEEEEeecCC
Confidence            34557899999999999999999999999999999997432  2345667899999888     6899999999987654


Q ss_pred             --eEEEEEeCC-CCCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          118 --HICIVFEKL-GSSLYDFLRKNNY-RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       118 --~~~lv~e~~-~~sL~~~l~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                        ..++||||+ +++|.+++..... ..+++..+..++.||+.||.|||+.||+||||||+||++....           
T Consensus        81 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-----------  149 (319)
T 4euu_A           81 TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE-----------  149 (319)
T ss_dssp             TCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECT-----------
T ss_pred             CceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccC-----------
Confidence              889999999 8999999986432 2389999999999999999999999999999999999983321           


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhh--------CCCCCCccchHhHHHHHHHHH
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVIL--------GLGWTYPCDIWSVGCILVELC  263 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~--------~~~~~~~sDvwSlG~il~~l~  263 (379)
                                  +....++|+|||.+.......  ....||+.|+|||++.        +..++.++|||||||++|+|+
T Consensus       150 ------------~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~  217 (319)
T 4euu_A          150 ------------DGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAA  217 (319)
T ss_dssp             ------------TSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHH
T ss_pred             ------------CCCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHH
Confidence                        345668999999887654433  3457899999999986        467899999999999999999


Q ss_pred             hCCCCCCCCch-HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccch
Q 017021          264 TGEALFQTHEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  342 (379)
Q Consensus       264 ~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (379)
                      +|..||..... ......+.+.....|...+..+...     .++...|....            +.    ........+
T Consensus       218 ~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-----~~~~~~~~~~~------------~~----~~~~~~~~~  276 (319)
T 4euu_A          218 TGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKA-----ENGPIDWSGDM------------PV----SCSLSRGLQ  276 (319)
T ss_dssp             HSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECS-----TTCCEEEESSC------------CT----TCSSCHHHH
T ss_pred             hCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcc-----cCCccccCccC------------Cc----ccccchhHH
Confidence            99999975332 1112222222222222111111100     00011111000            00    001123456


Q ss_pred             hHHHHHHhhccccCCCCCcCHHHHhcCC
Q 017021          343 GDLTHLLQGLLRYDPTDRLTAREALRHP  370 (379)
Q Consensus       343 ~~~~~li~~~L~~dP~~Rpta~e~l~hp  370 (379)
                      ..+.++|++||+.||++|||++|+|+||
T Consensus       277 ~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          277 VLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             HHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             HHhHHHHHHhccCChhhhccHHHhhhcc
Confidence            7899999999999999999999999997

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=1.4e-44  Score=328.98  Aligned_cols=256  Identities=22%  Similarity=0.335  Sum_probs=208.5

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee--e
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD--Y  115 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~--~  115 (379)
                      ....|++.+.||+|+||.||+|.++.+++.||+|++...   ......+.+|+.++..+     .|+|++++++++.  .
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   78 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-----KHPNIVRYYDRIIDRT   78 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEEGG
T ss_pred             chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-----CCCCCCeEEEEEecCC
Confidence            345789999999999999999999999999999999743   23445677888888888     6899999999774  4


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcC-----CcccCCCCCcEEEecccccccC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLC-----MIHTDLKPENVLLVSSEYIKVP  187 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-----iiH~dlkp~Nili~~~~~~~~~  187 (379)
                      ....|+||||+ +++|.+++...  ....+++..++.++.|++.||.|||+.|     ++||||||+||++         
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~---------  149 (279)
T 2w5a_A           79 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---------  149 (279)
T ss_dssp             GTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEE---------
T ss_pred             CceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEE---------
Confidence            67899999999 78999999763  2234899999999999999999999999     9999999999999         


Q ss_pred             CCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh
Q 017021          188 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~  264 (379)
                                        +.++.++|+|||.+.......   ....||+.|+|||.+.+..++.++||||||+++|+|++
T Consensus       150 ------------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  211 (279)
T 2w5a_A          150 ------------------DGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA  211 (279)
T ss_dssp             ------------------CSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHH
T ss_pred             ------------------cCCCCEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHH
Confidence                              556678899999886554432   23468999999999999889999999999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |..||...+..+....+.....+.                                                ....++..
T Consensus       212 g~~p~~~~~~~~~~~~i~~~~~~~------------------------------------------------~~~~~~~~  243 (279)
T 2w5a_A          212 LMPPFTAFSQKELAGKIREGKFRR------------------------------------------------IPYRYSDE  243 (279)
T ss_dssp             SSCSSCCSSHHHHHHHHHHTCCCC------------------------------------------------CCTTSCHH
T ss_pred             CCCCCcccCHHHHHHHHhhccccc------------------------------------------------CCcccCHH
Confidence            999998776655444333321100                                                01135678


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +.++|.+||+.||.+|||++|+++|+|+.++.
T Consensus       244 l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  275 (279)
T 2w5a_A          244 LNEIITRMLNLKDYHRPSVEEILENPLILEHH  275 (279)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred             HHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence            99999999999999999999999999999864

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=1.7e-44  Score=331.52  Aligned_cols=251  Identities=22%  Similarity=0.313  Sum_probs=198.9

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ..|++.+.||+|+||.||+|++..+++.||+|++...    ......+.+|+.++..+     .|+|++++++++..++.
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~hp~iv~~~~~~~~~~~   85 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-----SHQNIVSMIDVDEEDDC   85 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-----CBTTBCCEEEEEECSSE
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-----CCCCCceEEEeeeeCCe
Confidence            4689999999999999999999999999999998532    22234566777777776     68999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .|+||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||++                   
T Consensus        86 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~-------------------  144 (294)
T 4eqm_A           86 YYLVMEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI-------------------  144 (294)
T ss_dssp             EEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE-------------------
T ss_pred             EEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE-------------------
Confidence            99999999 889999998765  69999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                              +.++.++|+|||.+.......    ....||+.|+|||.+.+..++.++|||||||++|+|++|+.||.+.+
T Consensus       145 --------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~  216 (294)
T 4eqm_A          145 --------DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET  216 (294)
T ss_dssp             --------CTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC
T ss_pred             --------CCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence                    555678888888876543322    23568999999999999999999999999999999999999998876


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+......  ....+..                                          ........+..+.++|.+||
T Consensus       217 ~~~~~~~~~--~~~~~~~------------------------------------------~~~~~~~~~~~l~~li~~~l  252 (294)
T 4eqm_A          217 AVSIAIKHI--QDSVPNV------------------------------------------TTDVRKDIPQSLSNVILRAT  252 (294)
T ss_dssp             HHHHHHHHH--SSCCCCH------------------------------------------HHHSCTTSCHHHHHHHHHHS
T ss_pred             hHHHHHHHh--hccCCCc------------------------------------------chhcccCCCHHHHHHHHHHh
Confidence            544432221  1111110                                          01122346788999999999


Q ss_pred             ccCCCCCcCHHHHhcCCC
Q 017021          354 RYDPTDRLTAREALRHPF  371 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~  371 (379)
                      +.||.+||+..+.+.++|
T Consensus       253 ~~dp~~R~~~~~~l~~~l  270 (294)
T 4eqm_A          253 EKDKANRYKTIQEMKDDL  270 (294)
T ss_dssp             CSSGGGSCSSHHHHHHHH
T ss_pred             cCCHhHccccHHHHHHHH
Confidence            999999996555555554

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=3.1e-44  Score=330.07  Aligned_cols=270  Identities=23%  Similarity=0.337  Sum_probs=191.5

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee-------
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-------  115 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~-------  115 (379)
                      ..|++.+.||+|+||.||+|++..+++.||+|++.........+.+|+.++..+     .|+|++++++.+..       
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~~~   80 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-----NHQYVVRYYAAWLERRNFVKP   80 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEECCCCCC-
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhc-----CchHHHHHHHHHHhhcchhhh
Confidence            468899999999999999999999999999999986655566777888888877     68999999887754       


Q ss_pred             ------cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCC
Q 017021          116 ------RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD  188 (379)
Q Consensus       116 ------~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~  188 (379)
                            .+..|+||||+ +++|.+++.... ..+++..++.++.|++.||.|||+.|++||||||+||+++.++.++++|
T Consensus        81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~d  159 (303)
T 1zy4_A           81 MTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGD  159 (303)
T ss_dssp             -----CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred             hcccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEee
Confidence                  46789999999 889999998754 3578899999999999999999999999999999999995555444444


Q ss_pred             CccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCC
Q 017021          189 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                      ||++...........         + +-..............||+.|+|||.+.+. .++.++|||||||++|+|++   
T Consensus       160 fg~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---  226 (303)
T 1zy4_A          160 FGLAKNVHRSLDILK---------L-DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---  226 (303)
T ss_dssp             CCCCSCTTC-----------------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---
T ss_pred             Ccchhhcccccchhc---------c-ccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---
Confidence            444322211100000         0 000000000111234689999999999865 68899999999999999998   


Q ss_pred             CCCCCch-HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          268 LFQTHEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       268 pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      ||..... .+....+.......|                       .                      ......+..+.
T Consensus       227 p~~~~~~~~~~~~~~~~~~~~~~-----------------------~----------------------~~~~~~~~~~~  261 (303)
T 1zy4_A          227 PFSTGMERVNILKKLRSVSIEFP-----------------------P----------------------DFDDNKMKVEK  261 (303)
T ss_dssp             CCSSHHHHHHHHHHHHSTTCCCC-----------------------T----------------------TCCTTTSHHHH
T ss_pred             ccCCchhHHHHHHhccccccccC-----------------------c----------------------cccccchHHHH
Confidence            5543221 122211111111111                       0                      01123456789


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ++|++||+.||.+|||++|+++||||+...
T Consensus       262 ~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (303)
T 1zy4_A          262 KIIRLLIDHDPNKRPGARTLLNSGWLPVKH  291 (303)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHSSCSCCCC
T ss_pred             HHHHHHHhcCcccCcCHHHHhCCCCcCCCC
Confidence            999999999999999999999999998754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2.8e-44  Score=325.54  Aligned_cols=249  Identities=26%  Similarity=0.379  Sum_probs=206.5

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      .+....|++.+.||+|+||.||+|.+. +++.||+|++.........+.+|+.++.++     .|+|++++++++.+++.
T Consensus         6 ~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~   79 (269)
T 4hcu_A            6 VIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKL-----SHPKLVQLYGVCLEQAP   79 (269)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTC-----CCTTBCCEEEEECSSSS
T ss_pred             EeChhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhC-----CCCCEeeEEEEEecCCc
Confidence            456678999999999999999999986 467799999986655567788899999888     68999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++                  
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~------------------  140 (269)
T 4hcu_A           80 ICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG------------------  140 (269)
T ss_dssp             EEEEEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC------------------
T ss_pred             eEEEEEeCCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEc------------------
Confidence            99999999 889999997654 3589999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH  272 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~  272 (379)
                               .++.++|+|||.+.......    ....+|+.|+|||.+.+..++.++||||||+++|+|++ |..||...
T Consensus       141 ---------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~  211 (269)
T 4hcu_A          141 ---------ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR  211 (269)
T ss_dssp             ---------GGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             ---------CCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC
Confidence                     44567888888776443321    23356778999999998899999999999999999999 99999887


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      ...+....+........                                                ....+..+.+++.+|
T Consensus       212 ~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~li~~~  243 (269)
T 4hcu_A          212 SNSEVVEDISTGFRLYK------------------------------------------------PRLASTHVYQIMNHC  243 (269)
T ss_dssp             CHHHHHHHHHTTCCCCC------------------------------------------------CTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHhcCccCCC------------------------------------------------CCcCCHHHHHHHHHH
Confidence            76655544433211111                                                112467899999999


Q ss_pred             cccCCCCCcCHHHHhcC
Q 017021          353 LRYDPTDRLTAREALRH  369 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~h  369 (379)
                      |+.||.+|||++|+++|
T Consensus       244 l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          244 WRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             ccCCcccCcCHHHHHHH
Confidence            99999999999999975

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=3.3e-45  Score=342.58  Aligned_cols=260  Identities=28%  Similarity=0.475  Sum_probs=179.8

Q ss_pred             hhhhhhh-ccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee----cc
Q 017021           43 FADKIHS-KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----RN  117 (379)
Q Consensus        43 ~~y~i~~-~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~----~~  117 (379)
                      -.|++.+ .||+|+||.||+|.++.+++.||+|++.....    ...|+..+.+.    ..|+|++.+++++..    ..
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~e~~~~~~~----~~h~~i~~~~~~~~~~~~~~~   99 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQA----SGGPHIVCILDVYENMHHGKR   99 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH----HHHHHHHHHHH----TTSTTBCCEEEEEEEEETTEE
T ss_pred             ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH----HHHHHHHHHHh----cCCCChHHHHHHHhhccCCCc
Confidence            3567744 69999999999999999999999999975432    22333333332    267899999998876    55


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..++||||+ +++|.+++.......+++..++.++.||+.||.|||+.|++||||||+||+++.+               
T Consensus       100 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~---------------  164 (336)
T 3fhr_A          100 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSK---------------  164 (336)
T ss_dssp             EEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS---------------
T ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEec---------------
Confidence            699999999 8899999988765679999999999999999999999999999999999999542               


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC-CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                               .....++|+|||.+....... ....||+.|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus       165 ---------~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  235 (336)
T 3fhr_A          165 ---------EKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQ  235 (336)
T ss_dssp             ---------STTCCEEECCCTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred             ---------CCCceEEEeccccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccch
Confidence                     235569999999987544332 3457899999999998888899999999999999999999999765433


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      .......+..                   ..+....+.                      ..+...+..+.+||.+||+.
T Consensus       236 ~~~~~~~~~~-------------------~~~~~~~~~----------------------~~~~~~~~~~~~li~~~L~~  274 (336)
T 3fhr_A          236 AISPGMKRRI-------------------RLGQYGFPN----------------------PEWSEVSEDAKQLIRLLLKT  274 (336)
T ss_dssp             ----------------------------------CCCT----------------------TTSTTCCHHHHHHHHHHSCS
T ss_pred             hhhhhHHHhh-------------------hccccccCc----------------------hhhccCCHHHHHHHHHHCCC
Confidence            2211110000                   000000000                      01234678899999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ||.+|||++|+++||||++.
T Consensus       275 dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          275 DPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             SGGGSCCHHHHHHSHHHHTG
T ss_pred             ChhHCcCHHHHhcCcccccc
Confidence            99999999999999999764

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=5.9e-45  Score=335.18  Aligned_cols=268  Identities=25%  Similarity=0.382  Sum_probs=186.6

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      ..+....|++.+.||+|+||.||+|.+..+++.||+|++....  .....+.+|+.++..+     .|+|++++++++..
T Consensus        10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~   84 (303)
T 2vwi_A           10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC-----HHPNIVSYYTSFVV   84 (303)
T ss_dssp             ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCC-----CCTTBCCEEEEEES
T ss_pred             cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhc-----CCCCEeeEEEEEee
Confidence            3455667899999999999999999999999999999986432  2234455566665555     68999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhC------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKN------NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD  188 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~------~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~  188 (379)
                      .+..++||||+ +++|.+++...      ....+++..+..++.||+.||.|||+.|++||||||+||++          
T Consensus        85 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~----------  154 (303)
T 2vwi_A           85 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL----------  154 (303)
T ss_dssp             SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE----------
T ss_pred             cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEE----------
Confidence            99999999999 89999999741      22358999999999999999999999999999999999999          


Q ss_pred             CccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC--------CCcccccCCccchhhhhC-CCCCCccchHhHHHHH
Q 017021          189 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--------QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCIL  259 (379)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il  259 (379)
                                       +.++.++|+|||.+......        .....||+.|+|||.+.+ ..++.++|||||||++
T Consensus       155 -----------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il  217 (303)
T 2vwi_A          155 -----------------GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA  217 (303)
T ss_dssp             -----------------CTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHH
T ss_pred             -----------------cCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHH
Confidence                             44556777777766433221        123468999999999875 5689999999999999


Q ss_pred             HHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhc
Q 017021          260 VELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD  339 (379)
Q Consensus       260 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (379)
                      |+|++|..||.................+....                                       .........
T Consensus       218 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~  258 (303)
T 2vwi_A          218 IELATGAAPYHKYPPMKVLMLTLQNDPPSLET---------------------------------------GVQDKEMLK  258 (303)
T ss_dssp             HHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC--------------------------------------------CCCC
T ss_pred             HHHHhCCCCCccCchhhHHHHHhccCCCcccc---------------------------------------ccccchhhh
Confidence            99999999998765443322111110000000                                       000011123


Q ss_pred             cchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       340 ~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      .++..+.++|.+||+.||.+|||++|+++||||+...
T Consensus       259 ~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  295 (303)
T 2vwi_A          259 KYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK  295 (303)
T ss_dssp             CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred             hhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence            4677899999999999999999999999999998754

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1.1e-43  Score=328.39  Aligned_cols=250  Identities=22%  Similarity=0.282  Sum_probs=197.3

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      ..+....|++.++||+|+||.||+|++  +++.||+|++....   .....+.+|+.++.++     .|+|++++++++.
T Consensus        32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~  104 (309)
T 3p86_A           32 MDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-----RHPNIVLFMGAVT  104 (309)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEC
T ss_pred             ccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEE
Confidence            445667889999999999999999976  57889999987432   2334567899999888     6899999999999


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecccccccCCCc
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNY-RSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~--iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                      ..+..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||+.|  |+||||||+||++            
T Consensus       105 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll------------  172 (309)
T 3p86_A          105 QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV------------  172 (309)
T ss_dssp             STTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEE------------
T ss_pred             ECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEE------------
Confidence            999999999999 8899999986531 13899999999999999999999999  9999999999999            


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCC
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                                     +.++.++|+|||.+......   .....||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus       173 ---------------~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~  237 (309)
T 3p86_A          173 ---------------DKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQ  237 (309)
T ss_dssp             ---------------CTTCCEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCC
T ss_pred             ---------------eCCCcEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence                           55567888888877643332   234578999999999999999999999999999999999999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ||...+..+....+.......                     ..                          ....++.+.+
T Consensus       238 Pf~~~~~~~~~~~~~~~~~~~---------------------~~--------------------------~~~~~~~l~~  270 (309)
T 3p86_A          238 PWGNLNPAQVVAAVGFKCKRL---------------------EI--------------------------PRNLNPQVAA  270 (309)
T ss_dssp             TTTTSCHHHHHHHHHHSCCCC---------------------CC--------------------------CTTSCHHHHH
T ss_pred             CCCCCCHHHHHHHHHhcCCCC---------------------CC--------------------------CccCCHHHHH
Confidence            998776655443332211111                     11                          1235678999


Q ss_pred             HHhhccccCCCCCcCHHHHhc
Q 017021          348 LLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~  368 (379)
                      +|.+||+.||.+|||++|+++
T Consensus       271 li~~~l~~dP~~Rps~~~ll~  291 (309)
T 3p86_A          271 IIEGCWTNEPWKRPSFATIMD  291 (309)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHHH
Confidence            999999999999999999986

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=5.1e-44  Score=323.47  Aligned_cols=249  Identities=21%  Similarity=0.288  Sum_probs=206.0

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      .+....|++.+.||+|+||.||+|.++ ++..||+|+++........+.+|+.++..+     .|+|++++++++..++.
T Consensus         4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~   77 (268)
T 3sxs_A            4 ELKREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKL-----SHPKLVKFYGVCSKEYP   77 (268)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSSS
T ss_pred             EechhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhC-----CCCCEeeEEEEEccCCc
Confidence            456678999999999999999999876 467799999986665667788899999988     67999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||++                   
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~-------------------  137 (268)
T 3sxs_A           78 IYIVTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV-------------------  137 (268)
T ss_dssp             EEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEE-------------------
T ss_pred             eEEEEEccCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEE-------------------
Confidence            99999999 899999997753 358999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH  272 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~  272 (379)
                              +.++.++|+|||.+.......    ....+|+.|+|||.+.+..++.++||||||+++|+|++ |..||...
T Consensus       138 --------~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~  209 (268)
T 3sxs_A          138 --------DRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY  209 (268)
T ss_dssp             --------CTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             --------CCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCcccc
Confidence                    455667888888776443332    22345678999999998889999999999999999999 99999877


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+....+........                                                ....++.+.++|.+|
T Consensus       210 ~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~l~~li~~~  241 (268)
T 3sxs_A          210 TNSEVVLKVSQGHRLYR------------------------------------------------PHLASDTIYQIMYSC  241 (268)
T ss_dssp             CHHHHHHHHHTTCCCCC------------------------------------------------CTTSCHHHHHHHHHT
T ss_pred             ChHHHHHHHHcCCCCCC------------------------------------------------CCcChHHHHHHHHHH
Confidence            66554443332211111                                                012456899999999


Q ss_pred             cccCCCCCcCHHHHhcC
Q 017021          353 LRYDPTDRLTAREALRH  369 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~h  369 (379)
                      |+.||++|||++|+++|
T Consensus       242 l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          242 WHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             cCCChhhCcCHHHHHHH
Confidence            99999999999999975

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=1.5e-43  Score=330.37  Aligned_cols=255  Identities=21%  Similarity=0.247  Sum_probs=202.4

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .+..|++.+.||+|+||.||+|++..+++.||+|++.... ....+..|+.++..+.    .|++++.+++++..++..+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~----~h~~i~~~~~~~~~~~~~~   81 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLG----SGDGIPQVYYFGPCGKYNA   81 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHC----SCTTSCCEEEEEEETTEEE
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhh----CCCCCCEEEEEEecCCccE
Confidence            3467899999999999999999999999999999997432 3456778999998883    5688999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +||||++++|.+++.... ..+++..+..++.|++.||+|||+.||+||||||+||+++.++.                 
T Consensus        82 lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~-----------------  143 (330)
T 2izr_A           82 MVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGN-----------------  143 (330)
T ss_dssp             EEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGG-----------------
T ss_pred             EEEEeCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCC-----------------
Confidence            999999999999998753 36999999999999999999999999999999999999965432                 


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC----------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ----------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                           .....++|+|||.+.......          ....||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       144 -----~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~  218 (330)
T 2izr_A          144 -----KTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ  218 (330)
T ss_dssp             -----TCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             -----CCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcc
Confidence                 122338888888876432221          34579999999999999999999999999999999999999998


Q ss_pred             CCchH---HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          271 THENL---EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       271 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      +.+..   +....+.....+.+.                                            .......+ ++.+
T Consensus       219 ~~~~~~~~~~~~~i~~~~~~~~~--------------------------------------------~~~~~~~p-~~~~  253 (330)
T 2izr_A          219 GLKADTLKERYQKIGDTKRATPI--------------------------------------------EVLCENFP-EMAT  253 (330)
T ss_dssp             TCCCSSHHHHHHHHHHHHHHSCH--------------------------------------------HHHTTTCH-HHHH
T ss_pred             ccccccHHHHHHHHHhhhccCCH--------------------------------------------HHHhccCh-HHHH
Confidence            74332   222222111111111                                            01112234 8999


Q ss_pred             HHhhccccCCCCCcCHHHHhc
Q 017021          348 LLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~  368 (379)
                      +|..||+.||.+||+++++++
T Consensus       254 li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          254 YLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCCHHHHHH
Confidence            999999999999999999876

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=8.1e-44  Score=326.45  Aligned_cols=254  Identities=25%  Similarity=0.372  Sum_probs=197.6

Q ss_pred             hhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC
Q 017021           48 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  126 (379)
Q Consensus        48 ~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~  126 (379)
                      ...||+|+||.||+|.+..+++.||+|++.... .....+.+|+.++..+     .|+|++++++++...+..++||||+
T Consensus        27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~  101 (295)
T 2clq_A           27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL-----KHKNIVQYLGSFSENGFIKIFMEQV  101 (295)
T ss_dssp             BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTC-----CCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhC-----CCCCEeeEeeEEEeCCcEEEEEEeC
Confidence            358999999999999999999999999987532 3345667788888877     7899999999999999999999999


Q ss_pred             -CCCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccccc
Q 017021          127 -GSSLYDFLRKNNY-RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR  204 (379)
Q Consensus       127 -~~sL~~~l~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (379)
                       +++|.+++..... ..+++..+..++.|++.||.|||+.|++||||||+||+++.                        
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~------------------------  157 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT------------------------  157 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET------------------------
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC------------------------
Confidence             8999999987532 24678899999999999999999999999999999999953                        


Q ss_pred             CCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhhCCC--CCCccchHhHHHHHHHHHhCCCCCCCCchHHHHH
Q 017021          205 MPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLG--WTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  279 (379)
Q Consensus       205 ~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~  279 (379)
                        .++.++|+|||.+......   .....||+.|+|||++.+..  ++.++||||||+++|+|++|..||..........
T Consensus       158 --~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  235 (295)
T 2clq_A          158 --YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM  235 (295)
T ss_dssp             --TTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHH
T ss_pred             --CCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHH
Confidence              2456788888877654332   23456899999999987643  7899999999999999999999997543322111


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                      .........+                                              ......+..+.++|.+||+.||++
T Consensus       236 ~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~~l~~dp~~  269 (295)
T 2clq_A          236 FKVGMFKVHP----------------------------------------------EIPESMSAEAKAFILKCFEPDPDK  269 (295)
T ss_dssp             HHHHHHCCCC----------------------------------------------CCCTTSCHHHHHHHHHTTCSSTTT
T ss_pred             Hhhccccccc----------------------------------------------cccccCCHHHHHHHHHHccCChhh
Confidence            0000000000                                              011235678999999999999999


Q ss_pred             CcCHHHHhcCCCCCCCCcC
Q 017021          360 RLTAREALRHPFFTRDHLR  378 (379)
Q Consensus       360 Rpta~e~l~hp~f~~~~~~  378 (379)
                      |||++|+++||||+....+
T Consensus       270 Rps~~~ll~~~~~~~~~~~  288 (295)
T 2clq_A          270 RACANDLLVDEFLKVSSKK  288 (295)
T ss_dssp             SCCHHHHHTSGGGCC----
T ss_pred             CCCHHHHhcChhhhhcccc
Confidence            9999999999999876543

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=1.1e-43  Score=324.53  Aligned_cols=250  Identities=20%  Similarity=0.299  Sum_probs=209.3

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      .+....|++.++||+|+||.||+|.++.+++.||+|++.........+.+|+.++..+     .|+|++++++++.+++.
T Consensus         9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~   83 (288)
T 3kfa_A            9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-----KHPNLVQLLGVCTREPP   83 (288)
T ss_dssp             BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSSS
T ss_pred             cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEccCCC
Confidence            3456778999999999999999999999999999999987666667788899999998     68999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .++||||+ +++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||+++                  
T Consensus        84 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~------------------  145 (288)
T 3kfa_A           84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG------------------  145 (288)
T ss_dssp             EEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEEC------------------
T ss_pred             EEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEc------------------
Confidence            99999999 79999999886656799999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH  272 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~  272 (379)
                               .++.++|+|||.+.......    ....+|+.|+|||.+.+..++.++||||||+++|+|++ |..||...
T Consensus       146 ---------~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~  216 (288)
T 3kfa_A          146 ---------ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI  216 (288)
T ss_dssp             ---------GGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ---------CCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                     44567788888776544333    22356788999999998899999999999999999999 99999876


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+....+.......                                                .....++.+.++|.+|
T Consensus       217 ~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~l~~li~~~  248 (288)
T 3kfa_A          217 DLSQVYELLEKDYRME------------------------------------------------RPEGCPEKVYELMRAC  248 (288)
T ss_dssp             CGGGHHHHHHTTCCCC------------------------------------------------CCTTCCHHHHHHHHHH
T ss_pred             CHHHHHHHHhccCCCC------------------------------------------------CCCCCCHHHHHHHHHH
Confidence            6544433332211110                                                0123567899999999


Q ss_pred             cccCCCCCcCHHHHhc
Q 017021          353 LRYDPTDRLTAREALR  368 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~  368 (379)
                      |+.||.+|||++|+++
T Consensus       249 l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          249 WQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             hCCChhhCcCHHHHHH
Confidence            9999999999999975

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1.1e-44  Score=340.19  Aligned_cols=271  Identities=20%  Similarity=0.359  Sum_probs=208.3

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhh------------------HhHHHHHHHHHHHHhcCCCC
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR------------------EAAMIEIEVLQQLAKHDKGG  103 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~------------------~~~~~e~~~l~~l~~~~~~~  103 (379)
                      ...|++.+.||+|+||.||+|.+  +++.||+|++.......                  ..+.+|+.++..+     .|
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h  102 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-----KN  102 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-----CC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-----CC
Confidence            34789999999999999999998  89999999997432211                  6677888888887     68


Q ss_pred             CeeEEecceeeecceEEEEEeCC-CCCHHHH------HHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCc
Q 017021          104 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDF------LRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPEN  175 (379)
Q Consensus       104 ~~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~------l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~N  175 (379)
                      +|++++++++.+.+..++||||+ +++|.++      +.......+++..+..++.|++.||.|||+ .|++||||||+|
T Consensus       103 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~N  182 (348)
T 2pml_X          103 EYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSN  182 (348)
T ss_dssp             TTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGG
T ss_pred             CCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHh
Confidence            99999999999999999999999 7899998      655434579999999999999999999999 999999999999


Q ss_pred             EEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC-CCcccccCCccchhhhhCC-CCCC-ccch
Q 017021          176 VLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVILGL-GWTY-PCDI  252 (379)
Q Consensus       176 ili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~-~sDv  252 (379)
                      |++                           +.++.++|+|||.+...... .....||..|+|||.+.+. .++. ++||
T Consensus       183 il~---------------------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di  235 (348)
T 2pml_X          183 ILM---------------------------DKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDI  235 (348)
T ss_dssp             EEE---------------------------CTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHH
T ss_pred             EEE---------------------------cCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhH
Confidence            999                           55567888888887653322 2345789999999999877 5665 9999


Q ss_pred             HhHHHHHHHHHhCCCCCCCCch-HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhH
Q 017021          253 WSVGCILVELCTGEALFQTHEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ  331 (379)
Q Consensus       253 wSlG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (379)
                      |||||++|+|++|..||..... .+....+.......|                       .......  .     +...
T Consensus       236 ~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~-----------------------~~~~~~~--~-----~~~~  285 (348)
T 2pml_X          236 WSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYP-----------------------LDRNHFL--Y-----PLTN  285 (348)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCC-----------------------CSSSSST--T-----TTCC
T ss_pred             HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCc-----------------------cchhhhh--c-----cccc
Confidence            9999999999999999987655 443333322211111                       1000000  0     0000


Q ss_pred             HHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          332 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       332 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ..........+..+.+||.+||+.||.+|||++|+++||||++..
T Consensus       286 ~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~  330 (348)
T 2pml_X          286 KKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTN  330 (348)
T ss_dssp             --------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             cccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCC
Confidence            001112245778999999999999999999999999999999764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=2.7e-43  Score=323.42  Aligned_cols=256  Identities=20%  Similarity=0.246  Sum_probs=204.0

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ....|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+|+..+..+.    +|++++.+++++......+
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~e~~~~~~l~----~~~~i~~~~~~~~~~~~~~   82 (298)
T 1csn_A            8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR-SDAPQLRDEYRTYKLLA----GCTGIPNVYYFGQEGLHNV   82 (298)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC-TTSCCHHHHHHHHHHTT----TCTTCCCEEEEEEETTEEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC-CccHHHHHHHHHHHHHh----cCCCCCeEEeecCCCceeE
Confidence            345689999999999999999999999999999998743 33456677888888873    4577888889999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +||||++++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.                 
T Consensus        83 lv~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~-----------------  144 (298)
T 1csn_A           83 LVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNS-----------------  144 (298)
T ss_dssp             EEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSS-----------------
T ss_pred             EEEEecCCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCC-----------------
Confidence            999999999999998754 35899999999999999999999999999999999999965431                 


Q ss_pred             ccccCCCCCCeEEeecCcccccCCC----------CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                           .....++|+|||.+......          .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus       145 -----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~  219 (298)
T 1csn_A          145 -----KNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ  219 (298)
T ss_dssp             -----TTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred             -----CCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcc
Confidence                 23345888888887643322          234568999999999999899999999999999999999999998


Q ss_pred             CCch---HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          271 THEN---LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       271 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ..+.   .+....+.......+                                            .......++.++.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~l~~  255 (298)
T 1csn_A          220 GLKAATNKQKYERIGEKKQSTP--------------------------------------------LRELCAGFPEEFYK  255 (298)
T ss_dssp             SCCSCCHHHHHHHHHHHHHHSC--------------------------------------------HHHHTTTSCHHHHH
T ss_pred             hhhccccHHHHHHHHhhccCcc--------------------------------------------HHHHHhhCcHHHHH
Confidence            7432   222222221111111                                            11122346789999


Q ss_pred             HHhhccccCCCCCcCHHHHhc
Q 017021          348 LLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~  368 (379)
                      +|.+||+.||++|||++++++
T Consensus       256 li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          256 YMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             HHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHhcCCcccCCCHHHHHH
Confidence            999999999999999999874

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=1.2e-43  Score=328.42  Aligned_cols=262  Identities=26%  Similarity=0.419  Sum_probs=202.7

Q ss_pred             eeeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           35 ITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        35 ~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      .+.+.+....|++.+.||+|+||.||+|.+. +++.||+|++...   ......+.+|+.++..+.+   ++++++++++
T Consensus        20 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~~~iv~~~~   95 (313)
T 3cek_A           20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---HSDKIIRLYD   95 (313)
T ss_dssp             CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGG---GCTTBCCEEE
T ss_pred             eeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccc---cCCceEEEEE
Confidence            3446677788999999999999999999985 4889999999643   2334566789999999854   3588999999


Q ss_pred             eeeecceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          112 WFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                      ++...+..++|||+.+++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||+++.           
T Consensus        96 ~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-----------  162 (313)
T 3cek_A           96 YEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-----------  162 (313)
T ss_dssp             EEECSSEEEEEECCCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-----------
T ss_pred             EeecCCEEEEEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-----------
Confidence            999999999999977999999998764  6899999999999999999999999999999999999932           


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhC-----------CCCCCccchHhH
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILG-----------LGWTYPCDIWSV  255 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwSl  255 (379)
                                       +.++|+|||.+.......     ....||+.|+|||.+.+           ..++.++|||||
T Consensus       163 -----------------~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~sl  225 (313)
T 3cek_A          163 -----------------GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL  225 (313)
T ss_dssp             -----------------TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHH
T ss_pred             -----------------CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHH
Confidence                             457777887776543322     23468999999999875           467889999999


Q ss_pred             HHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHH
Q 017021          256 GCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM  335 (379)
Q Consensus       256 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (379)
                      ||++|+|++|..||........  .+.....+.                  .....                        
T Consensus       226 G~il~el~~g~~pf~~~~~~~~--~~~~~~~~~------------------~~~~~------------------------  261 (313)
T 3cek_A          226 GCILYYMTYGKTPFQQIINQIS--KLHAIIDPN------------------HEIEF------------------------  261 (313)
T ss_dssp             HHHHHHHHHSSCTTTTCCSHHH--HHHHHHCTT------------------SCCCC------------------------
T ss_pred             HHHHHHHHhCCCchhhHHHHHH--HHHHHHhcc------------------cccCC------------------------
Confidence            9999999999999976432111  111111000                  00011                        


Q ss_pred             HhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          336 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       336 ~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                        ....+..+.++|.+||+.||.+|||++|+++||||+...
T Consensus       262 --~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          262 --PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             --CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             --cccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence              112456799999999999999999999999999998653

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.9e-43  Score=325.48  Aligned_cols=251  Identities=18%  Similarity=0.254  Sum_probs=198.7

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeec-cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG-IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      .+....|++.++||+|+||.||+|.+..+++.||+|++.. .......+.+|+.++.++     .|+||+++++++.+++
T Consensus         6 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~   80 (310)
T 3s95_A            6 IFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-----EHPNVLKFIGVLYKDK   80 (310)
T ss_dssp             EECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEETT
T ss_pred             eeChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-----CCcCcccEEEEEecCC
Confidence            3556678899999999999999999999999999998854 334456677888888877     6899999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+.|++||||||+||+++.+               
T Consensus        81 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~---------------  144 (310)
T 3s95_A           81 RLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVREN---------------  144 (310)
T ss_dssp             EEEEEEECCTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTT---------------
T ss_pred             eeEEEEEecCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCC---------------
Confidence            999999999 889999998753 368999999999999999999999999999999999999544               


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC-----------------CcccccCCccchhhhhCCCCCCccchHhHHHHH
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----------------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL  259 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----------------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il  259 (379)
                                  +.++|+|||.+.......                 ....||+.|+|||++.+..++.++|||||||++
T Consensus       145 ------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l  212 (310)
T 3s95_A          145 ------------KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVL  212 (310)
T ss_dssp             ------------SCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred             ------------CCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHH
Confidence                        445556665554322211                 145789999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhc
Q 017021          260 VELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD  339 (379)
Q Consensus       260 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (379)
                      |+|++|..|+.........         ..                                     .............
T Consensus       213 ~el~~g~~~~~~~~~~~~~---------~~-------------------------------------~~~~~~~~~~~~~  246 (310)
T 3s95_A          213 CEIIGRVNADPDYLPRTMD---------FG-------------------------------------LNVRGFLDRYCPP  246 (310)
T ss_dssp             HHHHHTCCSSTTTSCBCTT---------SS-------------------------------------BCHHHHHHHTCCT
T ss_pred             HHHhcCCCCCcchhhhHHH---------Hh-------------------------------------hhhhccccccCCC
Confidence            9999999988642210000         00                                     0000000111123


Q ss_pred             cchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          340 HSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       340 ~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      .+++.+.++|.+||+.||++|||++|+++
T Consensus       247 ~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          247 NCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             TCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            56778999999999999999999999975

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=8.8e-44  Score=331.37  Aligned_cols=249  Identities=22%  Similarity=0.266  Sum_probs=201.9

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCc---eEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKE---MVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~---~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      .+....|++.+.||+|+||.||+|+++.+++   .||+|+++..  ......+.+|+.++..+     .|+||+++++++
T Consensus        45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~  119 (325)
T 3kul_A           45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-----DHPNIIRLEGVV  119 (325)
T ss_dssp             BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEE
T ss_pred             ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEE
Confidence            4556789999999999999999999986654   4999999743  33445677888888877     789999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      .+++..|+||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.||+||||||+||++              
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll--------------  184 (325)
T 3kul_A          120 TRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV--------------  184 (325)
T ss_dssp             CGGGCCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE--------------
T ss_pred             EeCCccEEEeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE--------------
Confidence            9999999999999 889999997653 368999999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-C
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-G  265 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g  265 (379)
                                   +.++.++|+|||.+.......      ....+|+.|+|||++.+..++.++|||||||++|+|++ |
T Consensus       185 -------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g  251 (325)
T 3kul_A          185 -------------DSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG  251 (325)
T ss_dssp             -------------CTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred             -------------CCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCC
Confidence                         455667888888776543322      11235678999999998889999999999999999999 9


Q ss_pred             CCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          266 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       266 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                      ..||......+....+.......                      .                          ...++..+
T Consensus       252 ~~p~~~~~~~~~~~~~~~~~~~~----------------------~--------------------------~~~~~~~l  283 (325)
T 3kul_A          252 ERPYWNMTNRDVISSVEEGYRLP----------------------A--------------------------PMGCPHAL  283 (325)
T ss_dssp             CCTTTTSCHHHHHHHHHTTCCCC----------------------C--------------------------CTTCCHHH
T ss_pred             CCCcccCCHHHHHHHHHcCCCCC----------------------C--------------------------CCCcCHHH
Confidence            99998876665554433321111                      0                          12356789


Q ss_pred             HHHHhhccccCCCCCcCHHHHhc
Q 017021          346 THLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      .++|.+||+.||.+|||++|+++
T Consensus       284 ~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          284 HQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHH
Confidence            99999999999999999999985

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=1.2e-43  Score=323.72  Aligned_cols=249  Identities=20%  Similarity=0.312  Sum_probs=204.5

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      .+....|++.+.||+|+||.||+|.+. ++..||+|++.........+.+|+.++..+     .|+|++++++++.+.+.
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~   93 (283)
T 3gen_A           20 EIDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-----SHEKLVQLYGVCTKQRP   93 (283)
T ss_dssp             BCCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTC-----CCTTBCCEEEEECSSSS
T ss_pred             cCCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcC-----CCCCEeeEEEEEecCCC
Confidence            456678999999999999999999876 577899999986655667788899998888     68999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||++                   
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili-------------------  153 (283)
T 3gen_A           94 IFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV-------------------  153 (283)
T ss_dssp             EEEEECCCTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE-------------------
T ss_pred             eEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEE-------------------
Confidence            99999999 899999997633 258999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH  272 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~  272 (379)
                              +.++.++|+|||.+.......    ....+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||...
T Consensus       154 --------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~  225 (283)
T 3gen_A          154 --------NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF  225 (283)
T ss_dssp             --------CTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             --------cCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence                    555678888888876543321    22346778999999998889999999999999999998 99999887


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+....+.+......                                                ....++.+.++|.+|
T Consensus       226 ~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~l~~li~~~  257 (283)
T 3gen_A          226 TNSETAEHIAQGLRLYR------------------------------------------------PHLASEKVYTIMYSC  257 (283)
T ss_dssp             CHHHHHHHHHTTCCCCC------------------------------------------------CTTCCHHHHHHHHHT
T ss_pred             ChhHHHHHHhcccCCCC------------------------------------------------CCcCCHHHHHHHHHH
Confidence            76655554443221111                                                012456899999999


Q ss_pred             cccCCCCCcCHHHHhcC
Q 017021          353 LRYDPTDRLTAREALRH  369 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~h  369 (379)
                      |+.||++|||++|+++|
T Consensus       258 l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          258 WHEKADERPTFKILLSN  274 (283)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             ccCChhHCcCHHHHHHH
Confidence            99999999999999975

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=5.4e-44  Score=338.30  Aligned_cols=258  Identities=19%  Similarity=0.253  Sum_probs=207.9

Q ss_pred             eeechhhhhhhhccccccceeEEEEE-----ecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEec
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECW-----DRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIR  110 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~-----~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~  110 (379)
                      ..+....|++.++||+|+||.||+|.     +..+++.||+|+++..  ......+.+|+.++..+     .|+||++++
T Consensus        66 ~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~  140 (367)
T 3l9p_A           66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-----NHQNIVRCI  140 (367)
T ss_dssp             CBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-----CCTTBCCEE
T ss_pred             hhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhC-----CCCCCCeEE
Confidence            34566789999999999999999999     4567889999998642  33445677788888887     789999999


Q ss_pred             ceeeecceEEEEEeCC-CCCHHHHHHhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccccc
Q 017021          111 NWFDYRNHICIVFEKL-GSSLYDFLRKNNY-----RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI  184 (379)
Q Consensus       111 ~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~  184 (379)
                      +++......++||||+ +++|.+++.....     ..+++..++.++.||+.||.|||+.||+||||||+||+++.++  
T Consensus       141 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~--  218 (367)
T 3l9p_A          141 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG--  218 (367)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS--
T ss_pred             EEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCC--
Confidence            9999999999999999 8899999986431     2488999999999999999999999999999999999995332  


Q ss_pred             ccCCCccCCCCCCCCcccccCCCCCCeEEeecCccccc-----CCCCCcccccCCccchhhhhCCCCCCccchHhHHHHH
Q 017021          185 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE-----RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL  259 (379)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il  259 (379)
                                            .+..++|+|||.+...     ........||+.|+|||++.+..++.++|||||||++
T Consensus       219 ----------------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il  276 (367)
T 3l9p_A          219 ----------------------PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL  276 (367)
T ss_dssp             ----------------------TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             ----------------------CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHH
Confidence                                  3446899999988632     1222345678999999999988999999999999999


Q ss_pred             HHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhh
Q 017021          260 VELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV  338 (379)
Q Consensus       260 ~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (379)
                      |+|++ |..||...+..+....+.......+                                                .
T Consensus       277 ~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~------------------------------------------------~  308 (367)
T 3l9p_A          277 WEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP------------------------------------------------P  308 (367)
T ss_dssp             HHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC------------------------------------------------C
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC------------------------------------------------C
Confidence            99998 9999988776655544333221111                                                1


Q ss_pred             ccchhHHHHHHhhccccCCCCCcCHHHHhcCCCC
Q 017021          339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       339 ~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      ...+..+.+||.+||+.||.+|||++|+++|.++
T Consensus       309 ~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~  342 (367)
T 3l9p_A          309 KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  342 (367)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            2356789999999999999999999999988654

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=3.1e-44  Score=333.67  Aligned_cols=253  Identities=25%  Similarity=0.431  Sum_probs=206.0

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch-------hhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-------YREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      ......|++.+.||+|+||.||+|.+..+++.||+|++.....       ....+..|+.++..+.+   .|++++++++
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~~~i~~~~~  115 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS---GFSGVIRLLD  115 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS---SSCSBCCEEE
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhcc---CCCCceEEEE
Confidence            3445679999999999999999999999999999999974321       22456679999988843   4689999999


Q ss_pred             eeeecceEEEEEeCC-C-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCC
Q 017021          112 WFDYRNHICIVFEKL-G-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~-~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                      ++..++..++|+|++ + ++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||+++.         
T Consensus       116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~---------  184 (320)
T 3a99_A          116 WFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL---------  184 (320)
T ss_dssp             EEECSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET---------
T ss_pred             EEecCCcEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeC---------
Confidence            999999999999999 4 89999998754  6899999999999999999999999999999999999951         


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-CcccccCCccchhhhhCCCC-CCccchHhHHHHHHHHHhCCC
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~~l~~g~~  267 (379)
                                       .++.++|+|||.+....... ....||+.|+|||++.+..+ +.++|||||||++|+|++|..
T Consensus       185 -----------------~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~  247 (320)
T 3a99_A          185 -----------------NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI  247 (320)
T ss_dssp             -----------------TTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             -----------------CCCCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCC
Confidence                             34567888888776544332 33568999999999887665 688999999999999999999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ||.....      +..  +.                     ...                          ....+.++.+
T Consensus       248 pf~~~~~------~~~--~~---------------------~~~--------------------------~~~~~~~~~~  272 (320)
T 3a99_A          248 PFEHDEE------IIR--GQ---------------------VFF--------------------------RQRVSSECQH  272 (320)
T ss_dssp             SCCSHHH------HHH--CC---------------------CCC--------------------------SSCCCHHHHH
T ss_pred             CCCChhh------hhc--cc---------------------ccc--------------------------cccCCHHHHH
Confidence            9964221      000  00                     000                          1235678999


Q ss_pred             HHhhccccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          348 LLQGLLRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      ||.+||+.||++|||++|+++||||++...
T Consensus       273 li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  302 (320)
T 3a99_A          273 LIRWCLALRPSDRPTFEEIQNHPWMQDVLL  302 (320)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             HHHHHccCChhhCcCHHHHhcCHhhcCccC
Confidence            999999999999999999999999987643

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=8e-44  Score=331.06  Aligned_cols=261  Identities=16%  Similarity=0.214  Sum_probs=189.6

Q ss_pred             eeeeeechhhhhhhhccccccceeEEEEEecCCCc---eEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEE
Q 017021           35 ITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKE---MVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQ  108 (379)
Q Consensus        35 ~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~---~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~  108 (379)
                      ..-..+....|++.+.||+|+||.||+|+++.+++   .||+|+++..   ......+.+|+.++..+     .|+|+++
T Consensus        15 ~~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~   89 (323)
T 3qup_A           15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF-----DHPHVAK   89 (323)
T ss_dssp             -CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTC-----CCTTBCC
T ss_pred             hhhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHC-----CCCceeh
Confidence            34455667789999999999999999999887775   8999999742   33445677788888777     7899999


Q ss_pred             ecceeeecceE------EEEEeCC-CCCHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEE
Q 017021          109 IRNWFDYRNHI------CIVFEKL-GSSLYDFLRKNN----YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL  177 (379)
Q Consensus       109 ~~~~~~~~~~~------~lv~e~~-~~sL~~~l~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nil  177 (379)
                      +++++......      ++||||+ +++|.+++....    ...+++..+..++.||+.||.|||+.|++||||||+||+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIl  169 (323)
T 3qup_A           90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCM  169 (323)
T ss_dssp             CCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             hhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEE
Confidence            99999876554      9999999 889999996532    114899999999999999999999999999999999999


Q ss_pred             EecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccch
Q 017021          178 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDI  252 (379)
Q Consensus       178 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDv  252 (379)
                      +                           +.++.++|+|||.+.......     ....+|+.|+|||.+.+..++.++||
T Consensus       170 i---------------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  222 (323)
T 3qup_A          170 L---------------------------AEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDV  222 (323)
T ss_dssp             E---------------------------CTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHH
T ss_pred             E---------------------------cCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccch
Confidence            9                           455667888888776433322     22346778999999999899999999


Q ss_pred             HhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhH
Q 017021          253 WSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ  331 (379)
Q Consensus       253 wSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (379)
                      |||||++|+|++ |..||.+.+..+....+......                      ..                    
T Consensus       223 ~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~----------------------~~--------------------  260 (323)
T 3qup_A          223 WAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRL----------------------KQ--------------------  260 (323)
T ss_dssp             HHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC----------------------CC--------------------
T ss_pred             hhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCC----------------------CC--------------------
Confidence            999999999999 99999876665544333221100                      00                    


Q ss_pred             HHHHHhhccchhHHHHHHhhccccCCCCCcC-------HHHHhcCCCCCCC
Q 017021          332 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT-------AREALRHPFFTRD  375 (379)
Q Consensus       332 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-------a~e~l~hp~f~~~  375 (379)
                            ....+..+.++|.+||+.||.+|||       ++++++|||+...
T Consensus       261 ------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~  305 (323)
T 3qup_A          261 ------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST  305 (323)
T ss_dssp             ------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred             ------CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence                  1235678999999999999999999       8899999999764

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=2.5e-43  Score=333.98  Aligned_cols=252  Identities=19%  Similarity=0.290  Sum_probs=201.8

Q ss_pred             eechhhhhhhhccccccceeEEEEEec-------CCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEe
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDR-------ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQI  109 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~-------~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~  109 (379)
                      .+....|++.+.||+|+||.||+|++.       .++..||+|+++..  ......+.+|+.++..+    ..|+||+++
T Consensus        77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l----~~hpnIv~~  152 (370)
T 2psq_A           77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI----GKHKNIINL  152 (370)
T ss_dssp             BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHS----CCCTTBCCE
T ss_pred             cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHh----cCCCCEeeE
Confidence            345567899999999999999999874       34568999999743  22345677888888887    257899999


Q ss_pred             cceeeecceEEEEEeCC-CCCHHHHHHhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCC
Q 017021          110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPE  174 (379)
Q Consensus       110 ~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~--------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~  174 (379)
                      ++++...+..|+||||+ +++|.+++....              ...++...+..++.||+.||.|||+.||+||||||+
T Consensus       153 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~  232 (370)
T 2psq_A          153 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR  232 (370)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGG
T ss_pred             EEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchh
Confidence            99999999999999999 889999998753              124789999999999999999999999999999999


Q ss_pred             cEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCc
Q 017021          175 NVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYP  249 (379)
Q Consensus       175 Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~  249 (379)
                      ||++                           +.++.++|+|||.+.......     ....+|+.|+|||++.+..++.+
T Consensus       233 NIll---------------------------~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  285 (370)
T 2psq_A          233 NVLV---------------------------TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ  285 (370)
T ss_dssp             GEEE---------------------------CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHH
T ss_pred             hEEE---------------------------CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcH
Confidence            9999                           455667888888776433321     22356788999999999999999


Q ss_pred             cchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccch
Q 017021          250 CDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP  328 (379)
Q Consensus       250 sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (379)
                      +|||||||++|+|++ |..||.+....+....+.....                      ...                 
T Consensus       286 ~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~----------------------~~~-----------------  326 (370)
T 2psq_A          286 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR----------------------MDK-----------------  326 (370)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC----------------------CCC-----------------
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC----------------------CCC-----------------
Confidence            999999999999999 9999987655444333222110                      000                 


Q ss_pred             hhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          329 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                               ...++.++.++|.+||+.||++|||+.|++++
T Consensus       327 ---------~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          327 ---------PANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             ---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                     12356789999999999999999999999864

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=2.3e-43  Score=332.71  Aligned_cols=253  Identities=21%  Similarity=0.284  Sum_probs=199.7

Q ss_pred             eechhhhhhhhccccccceeEEEEE-----ecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECW-----DRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~-----~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      .+....|++.+.||+|+||.||+|+     +..+++.||+|+++...  .....+.+|+.++.++    .+|+||+++++
T Consensus        18 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l----~~hpniv~~~~   93 (359)
T 3vhe_A           18 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI----GHHLNVVNLLG   93 (359)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHH----CCCTTBCCEEE
T ss_pred             cccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhh----cCCcceeeeee
Confidence            4566789999999999999999998     56678999999997532  2345677899999888    35689999999


Q ss_pred             eeeecc-eEEEEEeCC-CCCHHHHHHhCCC--------------------------------------------------
Q 017021          112 WFDYRN-HICIVFEKL-GSSLYDFLRKNNY--------------------------------------------------  139 (379)
Q Consensus       112 ~~~~~~-~~~lv~e~~-~~sL~~~l~~~~~--------------------------------------------------  139 (379)
                      ++...+ ..++||||+ +++|.+++.....                                                  
T Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (359)
T 3vhe_A           94 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSL  173 (359)
T ss_dssp             EECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------
T ss_pred             eeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccccc
Confidence            987754 599999999 8899999987542                                                  


Q ss_pred             --------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccC
Q 017021          140 --------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  205 (379)
Q Consensus       140 --------------~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (379)
                                    ..+++..+..++.||+.||+|||+.||+||||||+||+++.                         
T Consensus       174 ~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~-------------------------  228 (359)
T 3vhe_A          174 SDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE-------------------------  228 (359)
T ss_dssp             ----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG-------------------------
T ss_pred             chhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC-------------------------
Confidence                          12889999999999999999999999999999999999944                         


Q ss_pred             CCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHHHH
Q 017021          206 PKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  279 (379)
Q Consensus       206 ~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~  279 (379)
                        ++.++|+|||.+.......     ....||+.|+|||++.+..++.++|||||||++|+|++ |..||.+....+...
T Consensus       229 --~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~  306 (359)
T 3vhe_A          229 --KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC  306 (359)
T ss_dssp             --GGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH
T ss_pred             --CCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHH
Confidence              4456777777665432221     23467889999999999899999999999999999998 999998765433322


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                      .........                     ..                          ....++++.++|.+||+.||++
T Consensus       307 ~~~~~~~~~---------------------~~--------------------------~~~~~~~l~~li~~~l~~dP~~  339 (359)
T 3vhe_A          307 RRLKEGTRM---------------------RA--------------------------PDYTTPEMYQTMLDCWHGEPSQ  339 (359)
T ss_dssp             HHHHHTCCC---------------------CC--------------------------CTTCCHHHHHHHHHHTCSSGGG
T ss_pred             HHHHcCCCC---------------------CC--------------------------CCCCCHHHHHHHHHHccCChhh
Confidence            221111100                     00                          1235678999999999999999


Q ss_pred             CcCHHHHhcC
Q 017021          360 RLTAREALRH  369 (379)
Q Consensus       360 Rpta~e~l~h  369 (379)
                      |||++|+++|
T Consensus       340 Rps~~ell~~  349 (359)
T 3vhe_A          340 RPTFSELVEH  349 (359)
T ss_dssp             SCCHHHHHHH
T ss_pred             CCCHHHHHHH
Confidence            9999999976

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.3e-43  Score=342.35  Aligned_cols=265  Identities=20%  Similarity=0.272  Sum_probs=197.6

Q ss_pred             eeeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           35 ITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        35 ~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      .....+....|++.+.||+|+||+|+. ....+++.||||++....  .....+|+.++..+    ..|+||+++++++.
T Consensus        16 ~~~~~i~~~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l----~~HpnIv~l~~~~~   88 (432)
T 3p23_A           16 TSVVIVGKISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPEC--FSFADREVQLLRES----DEHPNVIRYFCTEK   88 (432)
T ss_dssp             --CEEETTEEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTT--EEECHHHHHHHHHS----CCCTTBCCEEEEEE
T ss_pred             CCcEEEccEEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhc----cCCCCcCeEEEEEe
Confidence            334566777899999999999999764 335678999999996432  23456788888776    26899999999999


Q ss_pred             ecceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          115 YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       115 ~~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      +....|+||||++++|.+++..... ......+..++.||+.||.|||+.||+||||||+||++...+.           
T Consensus        89 ~~~~~~lv~E~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~-----------  156 (432)
T 3p23_A           89 DRQFQYIAIELCAATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNA-----------  156 (432)
T ss_dssp             ETTEEEEEEECCSEEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBT-----------
T ss_pred             cCCEEEEEEECCCCCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCC-----------
Confidence            9999999999998899999987542 3445566789999999999999999999999999999953221           


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhh---CCCCCCccchHhHHHHHHHHHh-
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCT-  264 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~~l~~-  264 (379)
                                 +....++|+|||.+.......      ....||+.|+|||++.   ...++.++|||||||++|+|++ 
T Consensus       157 -----------~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~  225 (432)
T 3p23_A          157 -----------HGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISE  225 (432)
T ss_dssp             -----------TTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTT
T ss_pred             -----------CCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcC
Confidence                       334567899999887544321      2356999999999997   3567789999999999999999 


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |..||..........    ..+....                   ....                       .....+..
T Consensus       226 g~~pf~~~~~~~~~~----~~~~~~~-------------------~~~~-----------------------~~~~~~~~  259 (432)
T 3p23_A          226 GSHPFGKSLQRQANI----LLGACSL-------------------DCLH-----------------------PEKHEDVI  259 (432)
T ss_dssp             SCBTTBSTTTHHHHH----HTTCCCC-------------------TTSC-----------------------TTCHHHHH
T ss_pred             CCCCcchhhHHHHHH----HhccCCc-------------------cccC-----------------------ccccccHH
Confidence            999996543322111    1111000                   0000                       00123456


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +.+||.+||+.||.+|||++|+++||||+..
T Consensus       260 ~~~li~~~L~~dP~~Rps~~evl~hp~f~~~  290 (432)
T 3p23_A          260 ARELIEKMIAMDPQKRPSAKHVLKHPFFWSL  290 (432)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred             HHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence            8899999999999999999999999999863

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.4e-42  Score=330.31  Aligned_cols=252  Identities=18%  Similarity=0.250  Sum_probs=204.3

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCC-------CceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEe
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRER-------KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQI  109 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~-------~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~  109 (379)
                      .+....|++.++||+|+||.||+|++..+       +..||+|+++..  ......+.+|+.++..+    ..|+||+++
T Consensus        65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l----~~hpnIv~~  140 (382)
T 3tt0_A           65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI----GKHKNIINL  140 (382)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHH----CCCTTBCCE
T ss_pred             ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHh----cCCchhhhh
Confidence            45567899999999999999999997543       367999999753  23335677899988887    357899999


Q ss_pred             cceeeecceEEEEEeCC-CCCHHHHHHhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCC
Q 017021          110 RNWFDYRNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPE  174 (379)
Q Consensus       110 ~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~--------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~  174 (379)
                      ++++..++..++||||+ +++|.+++....              ...+++..++.++.||+.||.|||+.||+||||||+
T Consensus       141 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~  220 (382)
T 3tt0_A          141 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR  220 (382)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             eeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcc
Confidence            99999999999999999 889999998754              135899999999999999999999999999999999


Q ss_pred             cEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCc
Q 017021          175 NVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYP  249 (379)
Q Consensus       175 Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~  249 (379)
                      ||++                           +.++.++|+|||.+.......     ....+|+.|+|||++.+..++.+
T Consensus       221 NIll---------------------------~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  273 (382)
T 3tt0_A          221 NVLV---------------------------TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ  273 (382)
T ss_dssp             GEEE---------------------------CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHH
T ss_pred             eEEE---------------------------cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCch
Confidence            9999                           455667888888776443321     23356789999999999999999


Q ss_pred             cchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccch
Q 017021          250 CDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP  328 (379)
Q Consensus       250 sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (379)
                      +|||||||++|+|++ |..||...+..+....+.+.....                      .                 
T Consensus       274 ~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~----------------------~-----------------  314 (382)
T 3tt0_A          274 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD----------------------K-----------------  314 (382)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC----------------------C-----------------
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC----------------------C-----------------
Confidence            999999999999999 999998776655444333221110                      0                 


Q ss_pred             hhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          329 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                               ...++.++.++|.+||+.||++|||++|++++
T Consensus       315 ---------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          315 ---------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             ---------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                     12356789999999999999999999999865

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=3.1e-43  Score=321.76  Aligned_cols=255  Identities=23%  Similarity=0.346  Sum_probs=202.4

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCC-------ceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEec
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERK-------EMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIR  110 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~-------~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~  110 (379)
                      .+....|++.+.||+|+||.||+|.++.++       ..||+|++... ......+.+|+.++..+     .|+|+++++
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~   78 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL-----SHKHLVLNY   78 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTS-----CCTTBCCEE
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhC-----CCCCEeEEE
Confidence            355678899999999999999999998877       46999998643 33456677888888887     689999999


Q ss_pred             ceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCC
Q 017021          111 NWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       111 ~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                      +++..++..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||+.|++||||||+||+++.++..++.+ 
T Consensus        79 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~-  156 (289)
T 4fvq_A           79 GVCVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGN-  156 (289)
T ss_dssp             EEECCTTCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTB-
T ss_pred             EEEEeCCCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccc-
Confidence            9999999999999999 899999998754 2489999999999999999999999999999999999997765433322 


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCC-C
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGE-A  267 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~-~  267 (379)
                                        ...++|+|||.+...... ....||+.|+|||.+.+ ..++.++|||||||++|+|++|. +
T Consensus       157 ------------------~~~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~  217 (289)
T 4fvq_A          157 ------------------PPFIKLSDPGISITVLPK-DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDK  217 (289)
T ss_dssp             ------------------CCEEEECCCCSCTTTSCH-HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ------------------cceeeeccCcccccccCc-cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCC
Confidence                              234899999988654332 23468899999999987 66899999999999999999954 5


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ||......... .........+                                                 ...+.++.+
T Consensus       218 ~~~~~~~~~~~-~~~~~~~~~~-------------------------------------------------~~~~~~l~~  247 (289)
T 4fvq_A          218 PLSALDSQRKL-QFYEDRHQLP-------------------------------------------------APKAAELAN  247 (289)
T ss_dssp             TTTTSCHHHHH-HHHHTTCCCC-------------------------------------------------CCSSCTTHH
T ss_pred             CccccchHHHH-HHhhccCCCC-------------------------------------------------CCCCHHHHH
Confidence            55443332222 1111111111                                                 124567899


Q ss_pred             HHhhccccCCCCCcCHHHHhcC
Q 017021          348 LLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      +|.+||+.||++|||++|+++|
T Consensus       248 li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          248 LINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHHH
Confidence            9999999999999999999875

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=6.2e-43  Score=315.95  Aligned_cols=249  Identities=25%  Similarity=0.363  Sum_probs=204.4

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      .+....|++.+.||+|+||.||+|.+. +++.||+|++.........+.+|+.++..+     .|+|++++++++.+++.
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   77 (267)
T 3t9t_A            4 VIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKL-----SHPKLVQLYGVCLEQAP   77 (267)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTC-----CCTTBCCEEEEECSSSS
T ss_pred             EEchhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhC-----CCCCEeeEEEEEccCCC
Confidence            355667899999999999999999986 577899999986655567788899988887     68999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++                  
T Consensus        78 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~------------------  138 (267)
T 3t9t_A           78 ICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG------------------  138 (267)
T ss_dssp             CEEEECCCTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC------------------
T ss_pred             eEEEEeCCCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEC------------------
Confidence            99999999 889999998754 3589999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCC----CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH  272 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~  272 (379)
                               .++.++|+|||.+......    .....+|..|+|||.+.+..++.++||||||+++|+|++ |+.||...
T Consensus       139 ---------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~  209 (267)
T 3t9t_A          139 ---------ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR  209 (267)
T ss_dssp             ---------GGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             ---------CCCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC
Confidence                     4456777888777644322    123356778999999998889999999999999999999 89999876


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+....+........                                                ....+..+.++|.+|
T Consensus       210 ~~~~~~~~i~~~~~~~~------------------------------------------------~~~~~~~l~~li~~~  241 (267)
T 3t9t_A          210 SNSEVVEDISTGFRLYK------------------------------------------------PRLASTHVYQIMNHC  241 (267)
T ss_dssp             CHHHHHHHHHTTCCCCC------------------------------------------------CTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHhcCCcCCC------------------------------------------------CccCcHHHHHHHHHH
Confidence            66554443322211100                                                012457899999999


Q ss_pred             cccCCCCCcCHHHHhcC
Q 017021          353 LRYDPTDRLTAREALRH  369 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~h  369 (379)
                      |+.||++|||++|++++
T Consensus       242 l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          242 WRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             ccCChhhCcCHHHHHHH
Confidence            99999999999999864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=1.9e-43  Score=335.84  Aligned_cols=249  Identities=22%  Similarity=0.375  Sum_probs=202.6

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      .+....|++.+.||+|+||.||+|.++.+++.||+|+++..  ......+.+|+.++..+     .|+|++++++++..+
T Consensus       110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~  184 (377)
T 3cbl_A          110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-----SHPNIVRLIGVCTQK  184 (377)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTC-----CCTTBCCEEEEECSS
T ss_pred             EEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhC-----CCCCEEEEEEEEecC
Confidence            45667889999999999999999999999999999998743  22345677899988887     789999999999999


Q ss_pred             ceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          117 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       117 ~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      +..|+||||+ +++|.+++...+ ..++...+..++.|++.||+|||+.|++||||||+||++                 
T Consensus       185 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~-----------------  246 (377)
T 3cbl_A          185 QPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV-----------------  246 (377)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE-----------------
T ss_pred             CCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEE-----------------
Confidence            9999999999 899999997653 358999999999999999999999999999999999999                 


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALF  269 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf  269 (379)
                                +.++.++|+|||.+.......     ....++..|+|||.+.+..++.++|||||||++|+|++ |..||
T Consensus       247 ----------~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~  316 (377)
T 3cbl_A          247 ----------TEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY  316 (377)
T ss_dssp             ----------CTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             ----------cCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence                      445567777777765433221     12235778999999998889999999999999999998 99999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      ...+..+....+.+..                      .++.|                          ..++..+.++|
T Consensus       317 ~~~~~~~~~~~~~~~~----------------------~~~~~--------------------------~~~~~~l~~li  348 (377)
T 3cbl_A          317 PNLSNQQTREFVEKGG----------------------RLPCP--------------------------ELCPDAVFRLM  348 (377)
T ss_dssp             TTSCHHHHHHHHHTTC----------------------CCCCC--------------------------TTCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHcCC----------------------CCCCC--------------------------CCCCHHHHHHH
Confidence            8766554443332211                      01111                          13567899999


Q ss_pred             hhccccCCCCCcCHHHHhc
Q 017021          350 QGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~  368 (379)
                      .+||+.||++|||++++++
T Consensus       349 ~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          349 EQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHcCCCchhCcCHHHHHH
Confidence            9999999999999999975

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=5.2e-43  Score=317.29  Aligned_cols=255  Identities=24%  Similarity=0.316  Sum_probs=194.6

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-----hhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      .+....|++.+.||+|+||.||+|.+.  ++.||+|++....     .....+.+|+.++..+     .|+|++++++++
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~   75 (271)
T 3dtc_A            3 EIDFAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-----KHPNIIALRGVC   75 (271)
T ss_dssp             BCCTTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHC-----CCTTBCCEEEEE
T ss_pred             ccchhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-----CCCCEeeEEEEE
Confidence            345567899999999999999999864  7889999986432     2235567788888887     689999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC---CcccCCCCCcEEEecccccccCCC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC---MIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                      ..++..++||||+ +++|.+++...   .+++..+..++.|++.||.|||+.|   ++||||||+||+++....      
T Consensus        76 ~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~------  146 (271)
T 3dtc_A           76 LKEPNLCLVMEFARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVE------  146 (271)
T ss_dssp             CCC--CEEEEECCTTEEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCS------
T ss_pred             ecCCceEEEEEcCCCCCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccc------
Confidence            9999999999999 89999998643   5999999999999999999999999   899999999999954211      


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCC
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                                   .....++.++|+|||.+....... ....||+.|+|||.+.+..++.++||||||+++|+|++|+.|
T Consensus       147 -------------~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p  213 (271)
T 3dtc_A          147 -------------NGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP  213 (271)
T ss_dssp             -------------SSCCSSCCEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCT
T ss_pred             -------------cccccCcceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                         001246779999999987544332 345789999999999998899999999999999999999999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |.+.+.......+.......+                                               .....++.+.++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~l  246 (271)
T 3dtc_A          214 FRGIDGLAVAYGVAMNKLALP-----------------------------------------------IPSTCPEPFAKL  246 (271)
T ss_dssp             TTTSCHHHHHHHHHTSCCCCC-----------------------------------------------CCTTCCHHHHHH
T ss_pred             CCCCCHHHHHHhhhcCCCCCC-----------------------------------------------CCcccCHHHHHH
Confidence            987665544332222111100                                               012356789999


Q ss_pred             HhhccccCCCCCcCHHHHhcC
Q 017021          349 LQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~h  369 (379)
                      |.+||+.||.+|||++|+++|
T Consensus       247 i~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          247 MEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhcCCcccCcCHHHHHHH
Confidence            999999999999999999865

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=4.2e-43  Score=344.74  Aligned_cols=251  Identities=20%  Similarity=0.303  Sum_probs=207.7

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      ..+....|++.++||+|+||.||+|.++.++..||+|+++........+.+|+.++.++     .|+||+++++++...+
T Consensus       215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~l~~~~~~~~  289 (495)
T 1opk_A          215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-----KHPNLVQLLGVCTREP  289 (495)
T ss_dssp             CBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSS
T ss_pred             cccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhc-----CCCCEeeEEEEEecCC
Confidence            34566778999999999999999999999999999999986655667888999999998     7899999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..|+||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+||+++                 
T Consensus       290 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~-----------------  352 (495)
T 1opk_A          290 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG-----------------  352 (495)
T ss_dssp             SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------
T ss_pred             cEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEC-----------------
Confidence            999999999 89999999876555689999999999999999999999999999999999994                 


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCC
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQT  271 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~  271 (379)
                                .++.+||+|||++.......    ....++..|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus       353 ----------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~  422 (495)
T 1opk_A          353 ----------ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG  422 (495)
T ss_dssp             ----------GGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             ----------CCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCC
Confidence                      44556777777765443222    12345678999999998889999999999999999999 9999987


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .+..+....+.+...                      +..                          ...++..+.+||.+
T Consensus       423 ~~~~~~~~~~~~~~~----------------------~~~--------------------------~~~~~~~l~~li~~  454 (495)
T 1opk_A          423 IDLSQVYELLEKDYR----------------------MER--------------------------PEGCPEKVYELMRA  454 (495)
T ss_dssp             CCGGGHHHHHHTTCC----------------------CCC--------------------------CTTCCHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCC----------------------CCC--------------------------CCCCCHHHHHHHHH
Confidence            665444333222110                      000                          12356789999999


Q ss_pred             ccccCCCCCcCHHHHhc
Q 017021          352 LLRYDPTDRLTAREALR  368 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~  368 (379)
                      ||+.||++|||++++++
T Consensus       455 cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          455 CWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HcCcChhHCcCHHHHHH
Confidence            99999999999999975

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.6e-43  Score=324.37  Aligned_cols=251  Identities=23%  Similarity=0.433  Sum_probs=196.4

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch-------hhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      ...|++.+.||+|+||.||+|++..+++.||+|++.....       .......|+.++.++.... .|+|++++++++.
T Consensus        30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-~h~~i~~~~~~~~  108 (312)
T 2iwi_A           30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGG-GHPGVIRLLDWFE  108 (312)
T ss_dssp             ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSC-CCSSBCCEEEEC-
T ss_pred             hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccC-CCCCeeeEEEEEe
Confidence            3468999999999999999999999999999999964321       2344556888888885433 6799999999999


Q ss_pred             ecceEEEEEeC-C-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          115 YRNHICIVFEK-L-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       115 ~~~~~~lv~e~-~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      ..+..++|+|+ + +++|.+++....  .+++..+..++.||+.||.|||+.|++||||||+||+++.            
T Consensus       109 ~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~------------  174 (312)
T 2iwi_A          109 TQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL------------  174 (312)
T ss_dssp             ----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEET------------
T ss_pred             cCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeC------------
Confidence            99999999999 5 889999998754  6899999999999999999999999999999999999951            


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC-CcccccCCccchhhhhCCCCC-CccchHhHHHHHHHHHhCCCCCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWT-YPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                                    .++.++|+|||.+....... ....||..|+|||++.+..+. .++|||||||++|+|++|+.||.
T Consensus       175 --------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  240 (312)
T 2iwi_A          175 --------------RRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE  240 (312)
T ss_dssp             --------------TTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             --------------CCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCC
Confidence                          44567888888776544332 345689999999998776654 68999999999999999999997


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      ....      +....                       ..+                          ....+..+.++|.
T Consensus       241 ~~~~------~~~~~-----------------------~~~--------------------------~~~~~~~~~~li~  265 (312)
T 2iwi_A          241 RDQE------ILEAE-----------------------LHF--------------------------PAHVSPDCCALIR  265 (312)
T ss_dssp             SHHH------HHHTC-----------------------CCC--------------------------CTTSCHHHHHHHH
T ss_pred             ChHH------Hhhhc-----------------------cCC--------------------------cccCCHHHHHHHH
Confidence            4221      00100                       001                          1235678999999


Q ss_pred             hccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          351 GLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +||+.||++|||++|+++||||+...
T Consensus       266 ~~l~~~p~~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          266 RCLAPKPSSRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             HHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred             HHccCChhhCcCHHHHhcChhhcCch
Confidence            99999999999999999999998754

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=8.7e-43  Score=323.02  Aligned_cols=258  Identities=24%  Similarity=0.381  Sum_probs=185.3

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchh--hHhHHHHHHH-HHHHHhcCCCCCeeEEecceee
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY--REAAMIEIEV-LQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~e~~~-l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      .......|++.+.||+|+||.||+|.++.+|+.||+|++......  ......|... +..     ..|+|++++++++.
T Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~-----~~h~~i~~~~~~~~   94 (318)
T 2dyl_A           20 YQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKS-----HDCPYIVQCFGTFI   94 (318)
T ss_dssp             EECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHT-----TTCTTBCCEEEEEE
T ss_pred             hhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHh-----cCCCceeeEEEEEe
Confidence            344556788899999999999999999999999999999753221  1222223322 222     27899999999999


Q ss_pred             ecceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      .++..++||||+++.+..+..... ..+++..+..++.|++.||.|||+. |++||||||+||++               
T Consensus        95 ~~~~~~lv~e~~~~~~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~---------------  158 (318)
T 2dyl_A           95 TNTDVFIAMELMGTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---------------  158 (318)
T ss_dssp             CSSEEEEEECCCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEE---------------
T ss_pred             cCCcEEEEEeccCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEE---------------
Confidence            999999999999777776665432 3689999999999999999999995 99999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhh-----CCCCCCccchHhHHHHHHHHHhCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~~l~~g~  266 (379)
                                  +.++.++|+|||.+.......  ....||+.|+|||.+.     ...++.++|||||||++|+|++|+
T Consensus       159 ------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~  226 (318)
T 2dyl_A          159 ------------DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ  226 (318)
T ss_dssp             ------------CTTSCEEECCCTTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSS
T ss_pred             ------------CCCCCEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCC
Confidence                        455667888888775433322  2346899999999984     456889999999999999999999


Q ss_pred             CCCCCCc-hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          267 ALFQTHE-NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       267 ~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                      .||.... ..+....+.+...+.                      .+.                        ....+.++
T Consensus       227 ~pf~~~~~~~~~~~~~~~~~~~~----------------------~~~------------------------~~~~~~~l  260 (318)
T 2dyl_A          227 FPYKNCKTDFEVLTKVLQEEPPL----------------------LPG------------------------HMGFSGDF  260 (318)
T ss_dssp             CTTTTCCSHHHHHHHHHHSCCCC----------------------CCS------------------------SSCCCHHH
T ss_pred             CCCCCCCccHHHHHHHhccCCCC----------------------CCc------------------------cCCCCHHH
Confidence            9998643 333332222211110                      000                        11356789


Q ss_pred             HHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          346 THLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      .++|.+||+.||.+|||++|+++||||++
T Consensus       261 ~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          261 QSFVKDCLTKDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             HHHHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred             HHHHHHHccCChhHCcCHHHHhhCHHHHh
Confidence            99999999999999999999999999975

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=6.4e-43  Score=320.50  Aligned_cols=253  Identities=23%  Similarity=0.264  Sum_probs=193.0

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ...|++.+.||+|+||.||+|++..+++.||+|++... .....+..|..++..+.+    ++++..+..++...+..++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~e~~~l~~l~~----~~~i~~~~~~~~~~~~~~l   82 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK-TKHPQLHIESKIYKMMQG----GVGIPTIRWCGAEGDYNVM   82 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTT----STTCCCEEEEEEETTEEEE
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccc-ccchHHHHHHHHHHHhcC----CCCCCeeeeecCCCCceEE
Confidence            34689999999999999999999999999999997643 234457779999988832    3445555666678889999


Q ss_pred             EEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          122 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      ||||++++|.+++.... ..+++..+..++.||+.||.|||+.|++||||||+||++...                    
T Consensus        83 v~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~--------------------  141 (296)
T 4hgt_A           83 VMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG--------------------  141 (296)
T ss_dssp             EEECCCCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCG--------------------
T ss_pred             EEEccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeecc--------------------
Confidence            99999999999998643 359999999999999999999999999999999999999321                    


Q ss_pred             cccCCCCCCeEEeecCcccccCCC----------CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                          +.++.++|+|||.+......          .....||+.|+|||.+.+..++.++|||||||++|+|++|+.||..
T Consensus       142 ----~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  217 (296)
T 4hgt_A          142 ----KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG  217 (296)
T ss_dssp             ----GGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             ----CCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcc
Confidence                23455777777776543322          1245789999999999999999999999999999999999999976


Q ss_pred             CchHH---HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          272 HENLE---HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       272 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      .+...   ....+.......+                                            .......+++++.++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~l~~l  253 (296)
T 4hgt_A          218 LKAATKRQKYERISEKKMSTP--------------------------------------------IEVLCKGYPSEFATY  253 (296)
T ss_dssp             CCCSSSSSHHHHHHHHHHHSC--------------------------------------------HHHHTTTSCHHHHHH
T ss_pred             cchhhhhhhhhhhhcccccch--------------------------------------------hhhhhccCCHHHHHH
Confidence            43211   1111111000000                                            111223467889999


Q ss_pred             HhhccccCCCCCcCHHHHhc
Q 017021          349 LQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~  368 (379)
                      |.+||+.||++|||++++++
T Consensus       254 i~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          254 LNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHhcCCCCCCCHHHHHH
Confidence            99999999999999999985

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=2.2e-42  Score=317.11  Aligned_cols=253  Identities=23%  Similarity=0.265  Sum_probs=195.9

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ...|++.+.||+|+||.||+|++..+++.||+|++.... ....+..|+.++..+.+    ++++..+..+....+..++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~----~~~i~~~~~~~~~~~~~~l   82 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQG----GVGIPTIRWCGAEGDYNVM   82 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTT----STTCCCEEEEEEETTEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhc----CCCCCccccccCCCCceEE
Confidence            457899999999999999999999999999999987433 34567789999998843    2334455555667888999


Q ss_pred             EEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          122 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      ||||++++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||++...                    
T Consensus        83 v~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~--------------------  141 (296)
T 3uzp_A           83 VMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG--------------------  141 (296)
T ss_dssp             EEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCG--------------------
T ss_pred             EEEecCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecC--------------------
Confidence            99999999999998543 369999999999999999999999999999999999999421                    


Q ss_pred             cccCCCCCCeEEeecCcccccCCC----------CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                          +.++.++|+|||.+......          .....||+.|+|||.+.+..++.++|||||||++|+|++|+.||..
T Consensus       142 ----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  217 (296)
T 3uzp_A          142 ----KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG  217 (296)
T ss_dssp             ----GGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             ----CCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence                23455777777776543322          1345789999999999998999999999999999999999999976


Q ss_pred             Cch---HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          272 HEN---LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       272 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      .+.   .+....+.......+                                            .......+++++.++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~l~~l  253 (296)
T 3uzp_A          218 LKAATKRQKYERISEKKMSTP--------------------------------------------IEVLCKGYPSEFATY  253 (296)
T ss_dssp             CCCSSSSSHHHHHHHHHHHSC--------------------------------------------HHHHTTTSCHHHHHH
T ss_pred             cCchhhhhhhhhhcccccCCc--------------------------------------------hHHHHhhCCHHHHHH
Confidence            332   111111111100000                                            111223467889999


Q ss_pred             HhhccccCCCCCcCHHHHhc
Q 017021          349 LQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~  368 (379)
                      |.+||+.||++|||++++++
T Consensus       254 i~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          254 LNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHhcCcCcCCCHHHHHH
Confidence            99999999999999999875

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=4.6e-43  Score=324.33  Aligned_cols=251  Identities=19%  Similarity=0.302  Sum_probs=201.1

Q ss_pred             eechhhhhhhhccccccceeEEEEEec-----CCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      .+....|++.+.||+|+||.||+|.+.     .+++.||+|++...  ......+.+|+.++..+     .|+|++++++
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~   93 (314)
T 2ivs_A           19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-----NHPHVIKLYG   93 (314)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEE
T ss_pred             ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-----CCCceeeEEE
Confidence            455678999999999999999999873     45689999999743  23345667788888777     7899999999


Q ss_pred             eeeecceEEEEEeCC-CCCHHHHHHhCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcc
Q 017021          112 WFDYRNHICIVFEKL-GSSLYDFLRKNNY----------------------RSFPIDLVREIARQLLECIAFMHDLCMIH  168 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~~sL~~~l~~~~~----------------------~~l~~~~~~~~~~qi~~aL~~LH~~~iiH  168 (379)
                      ++...+..++||||+ +++|.+++.....                      ..+++..+..++.||+.||.|||+.|++|
T Consensus        94 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH  173 (314)
T 2ivs_A           94 ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH  173 (314)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             EEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence            999999999999999 8999999987532                      24889999999999999999999999999


Q ss_pred             cCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhC
Q 017021          169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILG  243 (379)
Q Consensus       169 ~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~  243 (379)
                      |||||+||+++                           .++.++|+|||.+.......     ....+|+.|+|||.+.+
T Consensus       174 ~dikp~NIli~---------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  226 (314)
T 2ivs_A          174 RDLAARNILVA---------------------------EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFD  226 (314)
T ss_dssp             CCCSGGGEEEE---------------------------TTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHH
T ss_pred             cccchheEEEc---------------------------CCCCEEEccccccccccccccceeccCCCCcccccChhhhcC
Confidence            99999999995                           44557777777765433322     22356788999999998


Q ss_pred             CCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhh
Q 017021          244 LGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIK  322 (379)
Q Consensus       244 ~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (379)
                      ..++.++|||||||++|+|++ |..||.+....+....+......                      .            
T Consensus       227 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------------------~------------  272 (314)
T 2ivs_A          227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM----------------------E------------  272 (314)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC----------------------C------------
T ss_pred             CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcC----------------------C------------
Confidence            889999999999999999999 99999876554433322221100                      0            


Q ss_pred             hhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          323 SVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                                    .....+..+.++|.+||+.||++|||++|++++
T Consensus       273 --------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          273 --------------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             --------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                          012356789999999999999999999999864

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.1e-43  Score=330.34  Aligned_cols=268  Identities=21%  Similarity=0.226  Sum_probs=194.7

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      +.+....|++.++||+|+||.||+|++.  ++.||+|++............|+.++..+     .|+||+++++++....
T Consensus        19 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~   91 (322)
T 3soc_A           19 LYFQSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGM-----KHENILQFIGAEKRGT   91 (322)
T ss_dssp             EEETTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTC-----CCTTBCCEEEEEEEEC
T ss_pred             cccchhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcC-----CCCCchhhcceeccCC
Confidence            4466778999999999999999999865  78999999986555555555566666665     7899999999998744


Q ss_pred             ----eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc----------CCcccCCCCCcEEEeccc
Q 017021          118 ----HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL----------CMIHTDLKPENVLLVSSE  182 (379)
Q Consensus       118 ----~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~----------~iiH~dlkp~Nili~~~~  182 (379)
                          ..++||||+ +++|.+++...   .+++..+..++.|++.||+|||+.          ||+||||||+||++    
T Consensus        92 ~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill----  164 (322)
T 3soc_A           92 SVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL----  164 (322)
T ss_dssp             SSSEEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEE----
T ss_pred             CCCceEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEE----
Confidence                479999999 88999999875   499999999999999999999999          99999999999999    


Q ss_pred             ccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCC-----CCCCccch
Q 017021          183 YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGL-----GWTYPCDI  252 (379)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~-----~~~~~sDv  252 (379)
                                             +.++.++|+|||.+.......     ....||+.|+|||++.+.     .++.++||
T Consensus       165 -----------------------~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Di  221 (322)
T 3soc_A          165 -----------------------KNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDM  221 (322)
T ss_dssp             -----------------------CTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHH
T ss_pred             -----------------------CCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchh
Confidence                                   455678888888875433221     235789999999999863     45678899


Q ss_pred             HhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHH
Q 017021          253 WSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN  332 (379)
Q Consensus       253 wSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (379)
                      |||||++|+|++|+.||.+................+....+.      .........+..                  ..
T Consensus       222 wslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~------------------~~  277 (322)
T 3soc_A          222 YAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQ------EVVVHKKKRPVL------------------RD  277 (322)
T ss_dssp             HHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHH------HHHTTSCCCCCC------------------CG
T ss_pred             HHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhh------hhhhcccCCCCc------------------cc
Confidence            999999999999999997643311110001111111110000      000000000000                  00


Q ss_pred             HHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          333 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       333 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      .  ......+..+.+||.+||+.||++|||++|+++
T Consensus       278 ~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          278 Y--WQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             G--GGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             c--ccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            0  000123456999999999999999999999985

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.5e-42  Score=337.07  Aligned_cols=247  Identities=23%  Similarity=0.306  Sum_probs=201.1

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc-
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN-  117 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~-  117 (379)
                      .+....|++.+.||+|+||.||+|.+.  ++.||+|+++... ....+.+|+.++.++     .|+|++++++++.... 
T Consensus       189 ~i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~  260 (450)
T 1k9a_A          189 ALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQL-----RHSNLVQLLGVIVEEKG  260 (450)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-TSHHHHHHHHHHHTC-----CCTTBCCEEEEEECTTS
T ss_pred             ccChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-HHHHHHHHHHHHHhc-----cCCCEEEEEEEEEcCCC
Confidence            355667899999999999999999875  7799999998543 566788899999888     7899999999876654 


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..|+||||+ +++|.+++.......++...+..++.||+.||+|||+.|++||||||+||++                  
T Consensus       261 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill------------------  322 (450)
T 1k9a_A          261 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV------------------  322 (450)
T ss_dssp             CEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE------------------
T ss_pred             ceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE------------------
Confidence            799999999 8899999988664457999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchH
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  275 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~  275 (379)
                               +.++.+||+|||++...........++..|+|||++.+..++.++|||||||++|+|++ |..||...+..
T Consensus       323 ---------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~  393 (450)
T 1k9a_A          323 ---------SEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK  393 (450)
T ss_dssp             ---------CTTSCEEECCCTTCEECC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT
T ss_pred             ---------CCCCCEEEeeCCCcccccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence                     55667888888888754444344467889999999999999999999999999999998 99999876554


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.+...                      +..                          ...+++.+.++|.+||+.
T Consensus       394 ~~~~~i~~~~~----------------------~~~--------------------------p~~~~~~l~~li~~cl~~  425 (450)
T 1k9a_A          394 DVVPRVEKGYK----------------------MDA--------------------------PDGCPPAVYDVMKNCWHL  425 (450)
T ss_dssp             THHHHHHTTCC----------------------CCC--------------------------CTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHHcCCC----------------------CCC--------------------------CCcCCHHHHHHHHHHcCC
Confidence            44333322110                      111                          124677899999999999


Q ss_pred             CCCCCcCHHHHhc
Q 017021          356 DPTDRLTAREALR  368 (379)
Q Consensus       356 dP~~Rpta~e~l~  368 (379)
                      ||++|||+.++++
T Consensus       426 dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          426 DAATRPTFLQLRE  438 (450)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             ChhHCcCHHHHHH
Confidence            9999999999874

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=1.1e-42  Score=317.97  Aligned_cols=253  Identities=20%  Similarity=0.244  Sum_probs=200.2

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchh--------hHhHHHHHHHHHHHHhcCCCCCeeEEec
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY--------REAAMIEIEVLQQLAKHDKGGNRCVQIR  110 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--------~~~~~~e~~~l~~l~~~~~~~~~i~~~~  110 (379)
                      .+....|++.+.||+|+||.||+|++..+++.||+|++......        ...+.+|+.++..+     .|+|+++++
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~   89 (287)
T 4f0f_A           15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-----NHPNIVKLY   89 (287)
T ss_dssp             BCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-----CCTTBCCEE
T ss_pred             hhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-----CCCCchhhh
Confidence            35566789999999999999999999999999999998643211        14566788888777     689999999


Q ss_pred             ceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecccccccC
Q 017021          111 NWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVP  187 (379)
Q Consensus       111 ~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--iiH~dlkp~Nili~~~~~~~~~  187 (379)
                      +++.+..  ++||||+ +++|.+.+.... ..+++..+..++.|++.||.|||+.|  ++||||||+||+++..+.    
T Consensus        90 ~~~~~~~--~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~----  162 (287)
T 4f0f_A           90 GLMHNPP--RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE----  162 (287)
T ss_dssp             EEETTTT--EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCT----
T ss_pred             eeecCCC--eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCC----
Confidence            9987665  6999999 899999887654 36899999999999999999999999  999999999999954321    


Q ss_pred             CCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhh--CCCCCCccchHhHHHHHHHHHhC
Q 017021          188 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL--GLGWTYPCDIWSVGCILVELCTG  265 (379)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwSlG~il~~l~~g  265 (379)
                                        .....++|+|||.+...........||+.|+|||.+.  ...++.++|||||||++|+|++|
T Consensus       163 ------------------~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g  224 (287)
T 4f0f_A          163 ------------------NAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG  224 (287)
T ss_dssp             ------------------TCSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHS
T ss_pred             ------------------CCceeEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcC
Confidence                              2233489999999886665555568999999999984  44578999999999999999999


Q ss_pred             CCCCCCCchHHH--HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchh
Q 017021          266 EALFQTHENLEH--LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  343 (379)
Q Consensus       266 ~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (379)
                      ..||......+.  ...+.. .+..+                    .                          .....++
T Consensus       225 ~~pf~~~~~~~~~~~~~~~~-~~~~~--------------------~--------------------------~~~~~~~  257 (287)
T 4f0f_A          225 EGPFDEYSYGKIKFINMIRE-EGLRP--------------------T--------------------------IPEDCPP  257 (287)
T ss_dssp             SCTTTTCCCCHHHHHHHHHH-SCCCC--------------------C--------------------------CCTTSCH
T ss_pred             CCCCccccccHHHHHHHHhc-cCCCC--------------------C--------------------------CCcccCH
Confidence            999976543222  111111 11100                    0                          1124567


Q ss_pred             HHHHHHhhccccCCCCCcCHHHHhc
Q 017021          344 DLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       344 ~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      .+.++|.+||+.||.+|||++|+++
T Consensus       258 ~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          258 RLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHH
Confidence            8999999999999999999999985

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=9.5e-43  Score=326.29  Aligned_cols=252  Identities=20%  Similarity=0.286  Sum_probs=203.1

Q ss_pred             eeechhhhhhhhccccccceeEEEEEec-----CCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEec
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIR  110 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~  110 (379)
                      ..+....|++.+.||+|+||.||+|++.     .+++.||+|+++..  ......+.+|+.++..+     .|+|+++++
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~  116 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-----DNPNIVKLL  116 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-----CCTTBCCEE
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC-----CCCCEEEEE
Confidence            3556678899999999999999999987     45689999999743  23345677888888887     789999999


Q ss_pred             ceeeecceEEEEEeCC-CCCHHHHHHhCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 017021          111 NWFDYRNHICIVFEKL-GSSLYDFLRKNNY----------------------RSFPIDLVREIARQLLECIAFMHDLCMI  167 (379)
Q Consensus       111 ~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~----------------------~~l~~~~~~~~~~qi~~aL~~LH~~~ii  167 (379)
                      +++..++..|+||||+ +++|.+++.....                      ..+++..++.++.||+.||.|||+.||+
T Consensus       117 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iv  196 (343)
T 1luf_A          117 GVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFV  196 (343)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             EEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            9999999999999999 8899999987421                      3689999999999999999999999999


Q ss_pred             ccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhh
Q 017021          168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVIL  242 (379)
Q Consensus       168 H~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~  242 (379)
                      ||||||+||+++                           .++.++|+|||.+......     .....+|+.|+|||.+.
T Consensus       197 H~Dlkp~NIl~~---------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  249 (343)
T 1luf_A          197 HRDLATRNCLVG---------------------------ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF  249 (343)
T ss_dssp             CSCCSGGGEEEC---------------------------GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH
T ss_pred             cCCCCcceEEEC---------------------------CCCeEEEeecCCCcccccCccccccCCCcccceecChhhhc
Confidence            999999999994                           4556778888877543221     12346788999999999


Q ss_pred             CCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhh
Q 017021          243 GLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESI  321 (379)
Q Consensus       243 ~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (379)
                      +..++.++|||||||++|+|++ |..||.+.+..+....+.+....                      ..          
T Consensus       250 ~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------------------~~----------  297 (343)
T 1luf_A          250 YNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNIL----------------------AC----------  297 (343)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC----------------------CC----------
T ss_pred             cCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcC----------------------CC----------
Confidence            8889999999999999999999 99999876665544333221100                      00          


Q ss_pred             hhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          322 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                                      ...++..+.++|.+||+.||++|||+.+++++
T Consensus       298 ----------------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          298 ----------------PENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             ----------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence                            12356789999999999999999999999853

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=6.3e-43  Score=325.71  Aligned_cols=264  Identities=19%  Similarity=0.228  Sum_probs=207.2

Q ss_pred             eeeeeeeeechhhhhhhhccccccceeEEEEE-----ecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCC
Q 017021           32 FNLITYIVFSAFADKIHSKMGEGTFGQVLECW-----DRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGN  104 (379)
Q Consensus        32 ~~~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~-----~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~  104 (379)
                      .+......+....|++.+.||+|+||.||+|+     +..+++.||+|++...  ......+.+|+.++..+     .|+
T Consensus        19 ss~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~   93 (327)
T 2yfx_A           19 SSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-----NHQ   93 (327)
T ss_dssp             ECGGGSCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-----CCT
T ss_pred             cchhhcccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhC-----CCC
Confidence            33344455677889999999999999999998     5567889999999632  33445677788888887     789


Q ss_pred             eeEEecceeeecceEEEEEeCC-CCCHHHHHHhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE
Q 017021          105 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNY-----RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLL  178 (379)
Q Consensus       105 ~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili  178 (379)
                      |++++++++......|+||||+ +++|.+++.....     ..+++..+..++.||+.||.|||+.|++||||||+||++
T Consensus        94 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli  173 (327)
T 2yfx_A           94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL  173 (327)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             CCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEE
Confidence            9999999999999999999999 8999999987532     248899999999999999999999999999999999999


Q ss_pred             ecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhhCCCCCCccchH
Q 017021          179 VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIW  253 (379)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvw  253 (379)
                      +.+                        ..+..++|+|||.+......     .....||+.|+|||.+.+..++.++|||
T Consensus       174 ~~~------------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  229 (327)
T 2yfx_A          174 TCP------------------------GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW  229 (327)
T ss_dssp             SCS------------------------STTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHH
T ss_pred             ecC------------------------CCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHH
Confidence            532                        23456899999987633221     2334678899999999888899999999


Q ss_pred             hHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHH
Q 017021          254 SVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN  332 (379)
Q Consensus       254 SlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (379)
                      ||||++|+|++ |..||......+....+.......                      .                     
T Consensus       230 slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~----------------------~---------------------  266 (327)
T 2yfx_A          230 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD----------------------P---------------------  266 (327)
T ss_dssp             HHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC----------------------C---------------------
T ss_pred             HHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCC----------------------C---------------------
Confidence            99999999998 999998766554443332211110                      0                     


Q ss_pred             HHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCC
Q 017021          333 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       333 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                           ...++..+.++|.+||+.||.+|||++|+++|.|+
T Consensus       267 -----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          267 -----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  301 (327)
T ss_dssp             -----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence                 12356789999999999999999999999998764

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=7.3e-43  Score=325.19  Aligned_cols=269  Identities=22%  Similarity=0.322  Sum_probs=184.9

Q ss_pred             eeeeeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEec
Q 017021           33 NLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIR  110 (379)
Q Consensus        33 ~~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~  110 (379)
                      +......+....|++.+.||+|+||.||+|.++.+|+.||+|++.....  .......|...+.    ....|+|+++++
T Consensus        12 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~----~~~~h~niv~~~   87 (327)
T 3aln_A           12 SPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVM----RSSDCPYIVQFY   87 (327)
T ss_dssp             CCCEEECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHH----SSCCCTTBCCEE
T ss_pred             ChHHhcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHH----HcCCCCcEeeee
Confidence            3445556777889999999999999999999999999999999975322  2223333433222    123789999999


Q ss_pred             ceeeecceEEEEEeCCCCCHHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEeccccccc
Q 017021          111 NWFDYRNHICIVFEKLGSSLYDFLRK---NNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKV  186 (379)
Q Consensus       111 ~~~~~~~~~~lv~e~~~~sL~~~l~~---~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~iiH~dlkp~Nili~~~~~~~~  186 (379)
                      +++..++..++||||+.++|.+++..   .....+++..+..++.|++.||.|||+. |++||||||+||+++       
T Consensus        88 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~-------  160 (327)
T 3aln_A           88 GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD-------  160 (327)
T ss_dssp             EEEECSSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEE-------
T ss_pred             eEEEeCCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEc-------
Confidence            99999999999999997788888864   2234689999999999999999999998 999999999999994       


Q ss_pred             CCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhh----hCCCCCCccchHhHHHHHH
Q 017021          187 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILV  260 (379)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~----~~~~~~~~sDvwSlG~il~  260 (379)
                                          .++.++|+|||.+.......  ....||+.|+|||++    .+..++.++|||||||++|
T Consensus       161 --------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~  220 (327)
T 3aln_A          161 --------------------RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLY  220 (327)
T ss_dssp             --------------------TTTEEEECCCSSSCC------------------------------CCSHHHHHHHHHHHH
T ss_pred             --------------------CCCCEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHH
Confidence                                44567777777775433322  223689999999998    4556899999999999999


Q ss_pred             HHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc
Q 017021          261 ELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  340 (379)
Q Consensus       261 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (379)
                      +|++|..||.......  ..+.+..                   .......+.                      .....
T Consensus       221 ~l~~g~~pf~~~~~~~--~~~~~~~-------------------~~~~~~~~~----------------------~~~~~  257 (327)
T 3aln_A          221 ELATGRFPYPKWNSVF--DQLTQVV-------------------KGDPPQLSN----------------------SEERE  257 (327)
T ss_dssp             HHHHSCCCSSCC---------CCCC-------------------CSCCCCCCC----------------------CSSCC
T ss_pred             HHHHCCCCCCCcchHH--HHHHHHh-------------------cCCCCCCCC----------------------ccccc
Confidence            9999999997543211  0000000                   000000000                      01124


Q ss_pred             chhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       341 ~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      .+..+.+||.+||+.||++|||++|+++||||...
T Consensus       258 ~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          258 FSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             CCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence            66789999999999999999999999999999653

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=9.1e-43  Score=324.75  Aligned_cols=249  Identities=20%  Similarity=0.241  Sum_probs=194.1

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCce----EEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEM----VAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~----vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      .+....|++.++||+|+||.||+|++..+++.    ||+|.+...  ......+.+|+.++.++     .|+|+++++++
T Consensus        11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~   85 (327)
T 3poz_A           11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-----DNPHVCRLLGI   85 (327)
T ss_dssp             ECCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHC-----CBTTBCCEEEE
T ss_pred             hcCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhC-----CCCCEeEEEEE
Confidence            35567789999999999999999998877765    588877532  23456778899999888     67999999999


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                      +..+. .+++++++ +++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||+++.           
T Consensus        86 ~~~~~-~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~-----------  152 (327)
T 3poz_A           86 CLTST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT-----------  152 (327)
T ss_dssp             EESSS-EEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE-----------
T ss_pred             EecCC-eEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECC-----------
Confidence            98765 77888998 999999998754 36899999999999999999999999999999999999954           


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-C
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-G  265 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g  265 (379)
                                      ++.++|+|||.+.......     ....+|..|+|||.+.+..++.++|||||||++|+|++ |
T Consensus       153 ----------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g  216 (327)
T 3poz_A          153 ----------------PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG  216 (327)
T ss_dssp             ----------------TTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             ----------------CCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcC
Confidence                            4557777777775433322     12346779999999999999999999999999999999 9


Q ss_pred             CCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          266 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       266 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                      ..||.+.+..+....+.......                      .                          ...++..+
T Consensus       217 ~~p~~~~~~~~~~~~~~~~~~~~----------------------~--------------------------~~~~~~~~  248 (327)
T 3poz_A          217 SKPYDGIPASEISSILEKGERLP----------------------Q--------------------------PPICTIDV  248 (327)
T ss_dssp             CCTTTTCCGGGHHHHHHTTCCCC----------------------C--------------------------CTTBCHHH
T ss_pred             CCCccCCCHHHHHHHHHcCCCCC----------------------C--------------------------CccCCHHH
Confidence            99998766544433332211110                      0                          12356789


Q ss_pred             HHHHhhccccCCCCCcCHHHHhcC
Q 017021          346 THLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      .+++.+||+.||.+|||+.|++++
T Consensus       249 ~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          249 YMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHHHHcCCChhhCCCHHHHHHH
Confidence            999999999999999999999865

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=2.8e-42  Score=318.89  Aligned_cols=254  Identities=23%  Similarity=0.324  Sum_probs=202.0

Q ss_pred             eeechhhhhhhhccccccceeEEEEEe-----cCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEec
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWD-----RERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIR  110 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~-----~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~  110 (379)
                      ..+..-.|++.+.||+|+||.||+|++     ..+++.||+|++....  .....+.+|+.++.++    ..|+|+++++
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l----~~h~~i~~~~   93 (313)
T 1t46_A           18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL----GNHMNIVNLL   93 (313)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHH----CCCTTBCCEE
T ss_pred             cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhc----ccCCCeeeEE
Confidence            345667889999999999999999984     4678899999997432  2346677899988888    3578999999


Q ss_pred             ceeeecceEEEEEeCC-CCCHHHHHHhCCCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCC
Q 017021          111 NWFDYRNHICIVFEKL-GSSLYDFLRKNNYR----------------SFPIDLVREIARQLLECIAFMHDLCMIHTDLKP  173 (379)
Q Consensus       111 ~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~----------------~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp  173 (379)
                      +++..++..++||||+ +++|.+++......                .+++..+..++.||+.||.|||+.|++||||||
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp  173 (313)
T 1t46_A           94 GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAA  173 (313)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCcc
Confidence            9999999999999999 88999999875421                489999999999999999999999999999999


Q ss_pred             CcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCC
Q 017021          174 ENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTY  248 (379)
Q Consensus       174 ~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~  248 (379)
                      +||+++.                           ++.++|+|||.+.......     ....||+.|+|||.+.+..++.
T Consensus       174 ~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  226 (313)
T 1t46_A          174 RNILLTH---------------------------GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF  226 (313)
T ss_dssp             GGEEEET---------------------------TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCH
T ss_pred             ceEEEcC---------------------------CCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCCh
Confidence            9999954                           4556777777665443332     2235678899999999889999


Q ss_pred             ccchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccc
Q 017021          249 PCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL  327 (379)
Q Consensus       249 ~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (379)
                      ++|||||||++|+|++ |..||.+....+............+                                      
T Consensus       227 ~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------------------  268 (313)
T 1t46_A          227 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML--------------------------------------  268 (313)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCC--------------------------------------
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCC--------------------------------------
Confidence            9999999999999998 9999987554333222211110000                                      


Q ss_pred             hhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          328 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                               .....+..+.++|.+||+.||.+|||++|++++
T Consensus       269 ---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          269 ---------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             ---------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence                     012356789999999999999999999999864

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=6.8e-43  Score=325.29  Aligned_cols=248  Identities=22%  Similarity=0.249  Sum_probs=196.3

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCce----EEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEM----VAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~----vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      +....|++.+.||+|+||.||+|.+..+++.    ||+|.+...  ......+.+|+.++..+     .|+||+++++++
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~   84 (325)
T 3kex_A           10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-----DHAHIVRLLGLC   84 (325)
T ss_dssp             CCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTC-----CCTTBCCEEEEE
T ss_pred             cCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcC-----CCCCcCeEEEEE
Confidence            4556789999999999999999999888776    777776532  22234556788888777     789999999988


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      . ++..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||++              
T Consensus        85 ~-~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~--------------  148 (325)
T 3kex_A           85 P-GSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL--------------  148 (325)
T ss_dssp             C-BSSEEEEEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEE--------------
T ss_pred             c-CCccEEEEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEE--------------
Confidence            6 45689999999 899999997653 368899999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GE  266 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~  266 (379)
                                   +.++.++|+|||.+.......     ....||..|+|||.+.+..++.++|||||||++|+|++ |.
T Consensus       149 -------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~  215 (325)
T 3kex_A          149 -------------KSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGA  215 (325)
T ss_dssp             -------------SSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             -------------CCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCC
Confidence                         455668888888876543332     23457789999999998899999999999999999999 99


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||.+....+....+.......                      .                          ....+.++.
T Consensus       216 ~p~~~~~~~~~~~~~~~~~~~~----------------------~--------------------------~~~~~~~~~  247 (325)
T 3kex_A          216 EPYAGLRLAEVPDLLEKGERLA----------------------Q--------------------------PQICTIDVY  247 (325)
T ss_dssp             CTTTTSCTTHHHHHHHTTCBCC----------------------C--------------------------CTTBCTTTT
T ss_pred             CCccccCHHHHHHHHHcCCCCC----------------------C--------------------------CCcCcHHHH
Confidence            9998766554443332211100                      0                          112456788


Q ss_pred             HHHhhccccCCCCCcCHHHHhcC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      ++|.+||+.||.+|||++|+++|
T Consensus       248 ~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          248 MVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             HHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999999875

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=4.3e-43  Score=339.29  Aligned_cols=270  Identities=24%  Similarity=0.285  Sum_probs=195.5

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      -...|.+.+.||+|+||+||.+. ..+|+.||+|++...  ......+|+.++..+    ..|+||+++++.+.+++..|
T Consensus        13 l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l----~~HpnIv~~~~~~~~~~~~~   85 (434)
T 2rio_A           13 LKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLID--FCDIALMEIKLLTES----DDHPNVIRYYCSETTDRFLY   85 (434)
T ss_dssp             CSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGG--GHHHHHHHHHHHHHH----TTSTTBCCEEEEEECSSEEE
T ss_pred             hhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHH--HHHHHHHHHHHHHhc----cCCCCcCeEEEEEecCCeEE
Confidence            33446667899999999998754 567999999998743  234567788888776    26799999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCC-----CCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          121 IVFEKLGSSLYDFLRKNNYRS-----FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~-----l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      +||||++++|.+++.......     .++..+..++.||+.||+|||+.||+||||||+||+++..+......       
T Consensus        86 lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~-------  158 (434)
T 2rio_A           86 IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQ-------  158 (434)
T ss_dssp             EEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCC-------
T ss_pred             EEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCccccccc-------
Confidence            999999889999998754111     12234567999999999999999999999999999997543211000       


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCC-------CcccccCCccchhhhhC-------CCCCCccchHhHHHHHHH
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILG-------LGWTYPCDIWSVGCILVE  261 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlG~il~~  261 (379)
                             ........++|+|||.+.......       ....||+.|+|||++.+       ..++.++|||||||++|+
T Consensus       159 -------~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~e  231 (434)
T 2rio_A          159 -------QTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYY  231 (434)
T ss_dssp             -------TTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHH
T ss_pred             -------ccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHH
Confidence                   001345679999999987654432       23479999999999975       568899999999999999


Q ss_pred             HHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc
Q 017021          262 LCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  340 (379)
Q Consensus       262 l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (379)
                      |++ |..||......+.  .+.+.....+                       ...             .      .....
T Consensus       232 llt~g~~Pf~~~~~~~~--~i~~~~~~~~-----------------------~~~-------------~------~~~~~  267 (434)
T 2rio_A          232 ILSKGKHPFGDKYSRES--NIIRGIFSLD-----------------------EMK-------------C------LHDRS  267 (434)
T ss_dssp             HHTTSCCTTCSTTTHHH--HHHHTCCCCC-----------------------CCT-------------T------CCCHH
T ss_pred             HHhCCCCCCCCchhhHH--HHhcCCCCcc-----------------------ccc-------------c------ccccc
Confidence            998 9999976443221  1111111100                       000             0      00112


Q ss_pred             chhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       341 ~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      .+.++.+||.+||+.||.+|||+.|+++||||+..
T Consensus       268 ~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~~  302 (434)
T 2rio_A          268 LIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK  302 (434)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSCH
T ss_pred             chHHHHHHHHHHhhCChhhCCCHHHHHhCCccCCc
Confidence            45789999999999999999999999999999754

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=1.3e-42  Score=329.40  Aligned_cols=249  Identities=22%  Similarity=0.315  Sum_probs=192.9

Q ss_pred             eechhhhhhhhccccccceeEEEEEec---CCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      .+....|++.+.||+|+||.||+|+++   .++..||+|+++..  ......+.+|+.++.++     .|+||+++++++
T Consensus        41 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~  115 (373)
T 2qol_A           41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-----DHPNIIRLEGVV  115 (373)
T ss_dssp             BCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEE
T ss_pred             hcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEE
Confidence            345567899999999999999999887   56788999999743  33455677888888877     789999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      ...+..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||++              
T Consensus       116 ~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll--------------  180 (373)
T 2qol_A          116 TKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI--------------  180 (373)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE--------------
T ss_pred             eeCCceEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE--------------
Confidence            9999999999999 899999998654 358999999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-C
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-G  265 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g  265 (379)
                                   +.++.++|+|||.+.......      ....+|..|+|||++.+..++.++|||||||++|+|++ |
T Consensus       181 -------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g  247 (373)
T 2qol_A          181 -------------NSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG  247 (373)
T ss_dssp             -------------CTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC
T ss_pred             -------------cCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCC
Confidence                         455567777777776443322      11234678999999999899999999999999999998 9


Q ss_pred             CCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          266 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       266 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                      +.||...+..+....+.......+                                                ...++..+
T Consensus       248 ~~P~~~~~~~~~~~~i~~~~~~~~------------------------------------------------~~~~~~~l  279 (373)
T 2qol_A          248 ERPYWEMSNQDVIKAVDEGYRLPP------------------------------------------------PMDCPAAL  279 (373)
T ss_dssp             -CTTTTCCHHHHHHHHHTTEECCC------------------------------------------------CTTCBHHH
T ss_pred             CCCCCCCCHHHHHHHHHcCCCCCC------------------------------------------------CccccHHH
Confidence            999987666554433322211100                                                11356789


Q ss_pred             HHHHhhccccCCCCCcCHHHHhc
Q 017021          346 THLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      .++|.+||+.||.+|||++|+++
T Consensus       280 ~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          280 YQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHhCcChhhCcCHHHHHH
Confidence            99999999999999999999875

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.3e-42  Score=318.72  Aligned_cols=265  Identities=23%  Similarity=0.305  Sum_probs=197.2

Q ss_pred             eechhhhhhhhccccccceeEEEEE----ecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~----~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      .+....|++.++||+|+||.||+|+    +..+++.||+|++.... .....+.+|+.++..+     .|+|++++++++
T Consensus         6 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~   80 (295)
T 3ugc_A            6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-----QHDNIVKYKGVC   80 (295)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEE
T ss_pred             cCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEE
Confidence            4567789999999999999999998    66789999999997433 3345677899888888     689999999988


Q ss_pred             ee--cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCc
Q 017021          114 DY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       114 ~~--~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                      ..  ....++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++.+         
T Consensus        81 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~---------  150 (295)
T 3ugc_A           81 YSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE---------  150 (295)
T ss_dssp             CHHHHTSCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---------
T ss_pred             ecCCCCceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCC---------
Confidence            54  45689999999 899999998754 258999999999999999999999999999999999999554         


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~  264 (379)
                                        +.++|+|||.+.......      ....+|..|+|||.+.+..++.++|||||||++|+|++
T Consensus       151 ------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~  212 (295)
T 3ugc_A          151 ------------------NRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT  212 (295)
T ss_dssp             ------------------TEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ------------------CeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHh
Confidence                              456666666665433221      12346778999999999899999999999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |..|+......     .....+..+..... .....+..........                          ...++++
T Consensus       213 g~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------------------------~~~~~~~  260 (295)
T 3ugc_A          213 YIEKSKSPPAE-----FMRMIGNDKQGQMI-VFHLIELLKNNGRLPR--------------------------PDGCPDE  260 (295)
T ss_dssp             TTCTTCSHHHH-----HHHHHCTTCCTHHH-HHHHHHHHHTTCCCCC--------------------------CTTCCHH
T ss_pred             cccccCCChHH-----HHhhhcCccccchh-HHHHHHHHhccCcCCC--------------------------CcCcCHH
Confidence            99998753221     11111211111100 0011111111111111                          1246788


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhc
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      +.++|.+||+.||++|||++|+++
T Consensus       261 l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          261 IYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCChhhCCCHHHHHH
Confidence            999999999999999999999985

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=1.2e-42  Score=316.81  Aligned_cols=250  Identities=24%  Similarity=0.287  Sum_probs=190.8

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCC---CceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRER---KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      ..+....|++.+.||+|+||.||+|.+..+   +..||+|++...  ......+.+|+.++..+     .|+|+++++++
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~   84 (281)
T 1mp8_A           10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-----DHPHIVKLIGV   84 (281)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-----CCTTBCCEEEE
T ss_pred             eEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCccceEEEE
Confidence            345667899999999999999999998654   457999998642  23345667788888777     78999999998


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                      +. ++..|+||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++.+          
T Consensus        85 ~~-~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~----------  152 (281)
T 1mp8_A           85 IT-ENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN----------  152 (281)
T ss_dssp             EC-SSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET----------
T ss_pred             Ec-cCccEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCC----------
Confidence            84 46789999999 789999998654 358999999999999999999999999999999999999544          


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CC
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GE  266 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~  266 (379)
                                       +.++|+|||.+.......    ....+|+.|+|||.+.+..++.++|||||||++|+|++ |.
T Consensus       153 -----------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~  215 (281)
T 1mp8_A          153 -----------------DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV  215 (281)
T ss_dssp             -----------------TEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSC
T ss_pred             -----------------CCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCC
Confidence                             456677777665433221    22346778999999998899999999999999999996 99


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||......+....+.....                      ...                          ....++.+.
T Consensus       216 ~pf~~~~~~~~~~~i~~~~~----------------------~~~--------------------------~~~~~~~l~  247 (281)
T 1mp8_A          216 KPFQGVKNNDVIGRIENGER----------------------LPM--------------------------PPNCPPTLY  247 (281)
T ss_dssp             CTTTTCCGGGHHHHHHTTCC----------------------CCC--------------------------CTTCCHHHH
T ss_pred             CCCCcCCHHHHHHHHHcCCC----------------------CCC--------------------------CCCCCHHHH
Confidence            99987665444333322110                      000                          123567899


Q ss_pred             HHHhhccccCCCCCcCHHHHhcC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      ++|.+||+.||++|||+.|++++
T Consensus       248 ~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          248 SLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHHH
Confidence            99999999999999999999864

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.4e-42  Score=323.87  Aligned_cols=254  Identities=20%  Similarity=0.273  Sum_probs=199.3

Q ss_pred             eechhhhhhhhccccccceeEEEEEe-----cCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWD-----RERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~-----~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      .+....|++.+.||+|+||.||+|.+     ..++..||+|++...  ......+.+|+.++.++    ..|+||+++++
T Consensus        41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l----~~hp~iv~~~~  116 (344)
T 1rjb_A           41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL----GSHENIVNLLG  116 (344)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHH----CCCTTBCCEEE
T ss_pred             ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhh----cCCCCeeeEEE
Confidence            34566889999999999999999997     346778999999742  23446677899998888    35789999999


Q ss_pred             eeeecceEEEEEeCC-CCCHHHHHHhCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCccc
Q 017021          112 WFDYRNHICIVFEKL-GSSLYDFLRKNNY---------------------RSFPIDLVREIARQLLECIAFMHDLCMIHT  169 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~~sL~~~l~~~~~---------------------~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~  169 (379)
                      ++...+..++||||+ +++|.+++.....                     ..+++..+..++.||+.||.|||+.||+||
T Consensus       117 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~  196 (344)
T 1rjb_A          117 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR  196 (344)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred             EEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence            999999999999999 8899999987542                     237899999999999999999999999999


Q ss_pred             CCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCC
Q 017021          170 DLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGL  244 (379)
Q Consensus       170 dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~  244 (379)
                      ||||+||+++                           .++.++|+|||.+.......     ....||+.|+|||.+.+.
T Consensus       197 Dikp~NIll~---------------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  249 (344)
T 1rjb_A          197 DLAARNVLVT---------------------------HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEG  249 (344)
T ss_dssp             TCSGGGEEEE---------------------------TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHC
T ss_pred             CCChhhEEEc---------------------------CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccC
Confidence            9999999994                           44567777777765433222     234577899999999988


Q ss_pred             CCCCccchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhh
Q 017021          245 GWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS  323 (379)
Q Consensus       245 ~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (379)
                      .++.++|||||||++|+|++ |..||.+....+...........                     ...            
T Consensus       250 ~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~~------------  296 (344)
T 1rjb_A          250 IYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFK---------------------MDQ------------  296 (344)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCC---------------------CCC------------
T ss_pred             CCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCC---------------------CCC------------
Confidence            99999999999999999998 99999876543332222111000                     000            


Q ss_pred             hccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCC
Q 017021          324 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP  370 (379)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp  370 (379)
                                    ....+..+.++|.+||+.||.+|||+.|+++|.
T Consensus       297 --------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l  329 (344)
T 1rjb_A          297 --------------PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL  329 (344)
T ss_dssp             --------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             --------------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence                          113567899999999999999999999999763

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=1.5e-42  Score=337.35  Aligned_cols=249  Identities=24%  Similarity=0.347  Sum_probs=204.5

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      ..+....|++.++||+|+||.||+|.+.. +..||+|+++........+.+|+.++..+     .|+|++++++++. .+
T Consensus       183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~l~~~~~-~~  255 (454)
T 1qcf_A          183 WEIPRESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSMSVEAFLAEANVMKTL-----QHDKLVKLHAVVT-KE  255 (454)
T ss_dssp             SBCCGGGEEEEEEEECCSSEEEEEEEETT-TEEEEEEEECTTSBCHHHHHHHHHHHTTC-----CCTTBCCEEEEEC-SS
T ss_pred             eeechHHeEEEEEcccCCceEEEEEEECC-ccEEEEEEecCCCccHHHHHHHHHHHhhC-----CCCCEeeEEEEEe-CC
Confidence            34566788999999999999999999754 67899999986655667888899998887     7899999999886 56


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..|+||||+ +++|.+++.......++...+..++.||+.||.|||+.||+||||||+|||+                  
T Consensus       256 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill------------------  317 (454)
T 1qcf_A          256 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV------------------  317 (454)
T ss_dssp             SCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE------------------
T ss_pred             ccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE------------------
Confidence            789999999 8999999976433358899999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCC
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQT  271 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~  271 (379)
                               +.++.+||+|||++.......    ....+|..|+|||++....++.++|||||||++|+|++ |..||.+
T Consensus       318 ---------~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~  388 (454)
T 1qcf_A          318 ---------SASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG  388 (454)
T ss_dssp             ---------CTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             ---------CCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCC
Confidence                     555678888888886543321    22345778999999998899999999999999999999 9999988


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .+..+....+.+....+                      .                          ...++..+.++|.+
T Consensus       389 ~~~~~~~~~i~~~~~~~----------------------~--------------------------~~~~~~~l~~li~~  420 (454)
T 1qcf_A          389 MSNPEVIRALERGYRMP----------------------R--------------------------PENCPEELYNIMMR  420 (454)
T ss_dssp             CCHHHHHHHHHHTCCCC----------------------C--------------------------CTTSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCCC----------------------C--------------------------CCCCCHHHHHHHHH
Confidence            77666555444321111                      0                          11356789999999


Q ss_pred             ccccCCCCCcCHHHHhc
Q 017021          352 LLRYDPTDRLTAREALR  368 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~  368 (379)
                      ||+.||++|||++++++
T Consensus       421 cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          421 CWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HccCChhHCcCHHHHHH
Confidence            99999999999999874

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=1.2e-42  Score=326.44  Aligned_cols=258  Identities=16%  Similarity=0.217  Sum_probs=190.4

Q ss_pred             eechhhhhhhhccccccceeEEEEEecC---CCceEEEEEeeccchh------------hHhHHHHHHHHHHHHhcCCCC
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRE---RKEMVAIKIVRGIKKY------------REAAMIEIEVLQQLAKHDKGG  103 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~---~~~~vAiK~~~~~~~~------------~~~~~~e~~~l~~l~~~~~~~  103 (379)
                      .+....|++.+.||+|+||.||+|.+..   ++..||+|++......            ...+.+|+..+..+     .|
T Consensus        33 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-----~h  107 (345)
T 2v62_A           33 DMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-----DY  107 (345)
T ss_dssp             CTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-----SC
T ss_pred             cccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-----cc
Confidence            3455679999999999999999999987   7899999998754221            11122333333333     78


Q ss_pred             CeeEEecceeee----cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEe
Q 017021          104 NRCVQIRNWFDY----RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV  179 (379)
Q Consensus       104 ~~i~~~~~~~~~----~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~  179 (379)
                      +|++++++++..    ....|+||||++++|.+++....  .+++..+..++.||+.||+|||+.||+||||||+||+++
T Consensus       108 ~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~  185 (345)
T 2v62_A          108 LGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLG  185 (345)
T ss_dssp             CCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE
T ss_pred             cCcceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEc
Confidence            999999999887    78999999999999999997755  699999999999999999999999999999999999996


Q ss_pred             cccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC----------CCcccccCCccchhhhhCCCCCCc
Q 017021          180 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILGLGWTYP  249 (379)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~  249 (379)
                      .++                         ...++|+|||.+......          .....||+.|+|||++.+..++.+
T Consensus       186 ~~~-------------------------~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  240 (345)
T 2v62_A          186 YKN-------------------------PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRR  240 (345)
T ss_dssp             SSS-------------------------TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHH
T ss_pred             cCC-------------------------CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCch
Confidence            432                         236788888877543221          123468999999999999899999


Q ss_pred             cchHhHHHHHHHHHhCCCCCCCC--chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccc
Q 017021          250 CDIWSVGCILVELCTGEALFQTH--ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL  327 (379)
Q Consensus       250 sDvwSlG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (379)
                      +|||||||++|+|++|..||...  +...............|......                                
T Consensus       241 ~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------  288 (345)
T 2v62_A          241 SDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKW--------------------------------  288 (345)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHH--------------------------------
T ss_pred             hhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhh--------------------------------
Confidence            99999999999999999999642  22222222222222333221110                                


Q ss_pred             hhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          328 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                              ......+.++.++|.+||+.||++|||++++++
T Consensus       289 --------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          289 --------APSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             --------SCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             --------ccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence                    000146778999999999999999999999875

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=2.9e-42  Score=326.13  Aligned_cols=259  Identities=15%  Similarity=0.206  Sum_probs=194.6

Q ss_pred             echhhhhhhhccccccceeEEEEEecCC-----CceEEEEEeeccchhhHhHHHHHHHHHHHHh----------cCCCCC
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRER-----KEMVAIKIVRGIKKYREAAMIEIEVLQQLAK----------HDKGGN  104 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~-----~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~----------~~~~~~  104 (379)
                      .....|++.++||+|+||.||+|.++.+     ++.||+|++....   .....|+.++..+.+          ....|+
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~  108 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN---GPLFTELKFYQRAAKPEQIQKWIRTRKLKYL  108 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC---HHHHHHHHHHHHHCCHHHHHHHHHHTTCSCC
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccc---hhHHHHHHHHHhhhhhHHHHHHHHHhhccCC
Confidence            3455799999999999999999998765     5889999987543   234445555555432          234689


Q ss_pred             eeEEecceeeec----ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEec
Q 017021          105 RCVQIRNWFDYR----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  180 (379)
Q Consensus       105 ~i~~~~~~~~~~----~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~  180 (379)
                      ||+++++++...    .+.|+||||++++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||+++.
T Consensus       109 ~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~  187 (364)
T 3op5_A          109 GVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY  187 (364)
T ss_dssp             CSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES
T ss_pred             CCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec
Confidence            999999998764    5689999999999999998753 36999999999999999999999999999999999999952


Q ss_pred             ccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC----------CCcccccCCccchhhhhCCCCCCcc
Q 017021          181 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILGLGWTYPC  250 (379)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~s  250 (379)
                                               ..++.++|+|||.+......          .....||+.|+|||++.+..++.++
T Consensus       188 -------------------------~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  242 (364)
T 3op5_A          188 -------------------------KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRG  242 (364)
T ss_dssp             -------------------------SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHH
T ss_pred             -------------------------CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchh
Confidence                                     14456777777777533221          1234599999999999998999999


Q ss_pred             chHhHHHHHHHHHhCCCCCCCCchHHHH-HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchh
Q 017021          251 DIWSVGCILVELCTGEALFQTHENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR  329 (379)
Q Consensus       251 DvwSlG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (379)
                      |||||||++|+|++|+.||.+....... ..........                                         
T Consensus       243 Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~-----------------------------------------  281 (364)
T 3op5_A          243 DLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYREN-----------------------------------------  281 (364)
T ss_dssp             HHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHC-----------------------------------------
T ss_pred             hHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhh-----------------------------------------
Confidence            9999999999999999999853222111 1111100000                                         


Q ss_pred             hHHHHHHhh--ccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          330 LQNLIMQHV--DHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       330 ~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      .........  ...+.++.++|..||+.||.+||+++++++
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          282 IASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            000111111  346788999999999999999999999874

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.4e-42  Score=317.57  Aligned_cols=246  Identities=23%  Similarity=0.322  Sum_probs=190.3

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch----hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      -.|++.+.||+|+||.||+|.+..+++.||+|++.....    ....+.+|+.++..+     .|+|++++++++..++.
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~hp~iv~~~~~~~~~~~  108 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-----QEPHVVPIHDFGEIDGQ  108 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEETTE
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-----CCCCeeEEEEEEeeCCe
Confidence            468899999999999999999999999999999974322    235566777777766     77999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .|+||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||++                   
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~-------------------  167 (309)
T 2h34_A          109 LYVDMRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV-------------------  167 (309)
T ss_dssp             EEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE-------------------
T ss_pred             EEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEE-------------------
Confidence            99999999 789999998764  68999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                              +.++.++|+|||.+.......    ....||+.|+|||.+.+..++.++||||||+++|+|++|+.||...+
T Consensus       168 --------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  239 (309)
T 2h34_A          168 --------SADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ  239 (309)
T ss_dssp             --------CTTSCEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH
T ss_pred             --------cCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch
Confidence                    455667788888775443322    23468999999999998889999999999999999999999998765


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      .......+.. ..+.+                                             .......+..+.++|.+||
T Consensus       240 ~~~~~~~~~~-~~~~~---------------------------------------------~~~~~~~~~~l~~li~~~l  273 (309)
T 2h34_A          240 LSVMGAHINQ-AIPRP---------------------------------------------STVRPGIPVAFDAVIARGM  273 (309)
T ss_dssp             HHHHHHHHHS-CCCCG---------------------------------------------GGTSTTCCTHHHHHHHHHT
T ss_pred             HHHHHHHhcc-CCCCc---------------------------------------------cccCCCCCHHHHHHHHHhc
Confidence            4322221111 11110                                             0112346778999999999


Q ss_pred             ccCCCCCc-CHHHHhc
Q 017021          354 RYDPTDRL-TAREALR  368 (379)
Q Consensus       354 ~~dP~~Rp-ta~e~l~  368 (379)
                      +.||++|| |++++++
T Consensus       274 ~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          274 AKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             CSSGGGSCSSHHHHHH
T ss_pred             cCCHHHHHHhHHHHHH
Confidence            99999999 8888763

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=1.6e-42  Score=315.94  Aligned_cols=245  Identities=26%  Similarity=0.319  Sum_probs=197.3

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee-------
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-------  115 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~-------  115 (379)
                      ..|++.+.||+|+||.||+|.+..+++.||+|++....   ..+.+|+.++..+     .|+|++++++++..       
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~~~   82 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKL-----DHVNIVHYNGCWDGFDYDPET   82 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHC-----CCTTBCCEEEEEEEEEEC---
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhC-----CCCCEEEEeeeEeccccCccc
Confidence            46889999999999999999999999999999997543   3566799998888     78999999988754       


Q ss_pred             ---------cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccc
Q 017021          116 ---------RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK  185 (379)
Q Consensus       116 ---------~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~  185 (379)
                               ....++||||+ +++|.+++.......+++..+..++.||+.||.|||+.|++||||||+||+++.     
T Consensus        83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~-----  157 (284)
T 2a19_B           83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD-----  157 (284)
T ss_dssp             ------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE-----
T ss_pred             ccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcC-----
Confidence                     45689999999 789999998764457999999999999999999999999999999999999954     


Q ss_pred             cCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC--CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHH
Q 017021          186 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC  263 (379)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~  263 (379)
                                            ++.++|+|||.+......  .....||+.|+|||.+.+..++.++||||||+++|+|+
T Consensus       158 ----------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  215 (284)
T 2a19_B          158 ----------------------TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL  215 (284)
T ss_dssp             ----------------------TTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHH
T ss_pred             ----------------------CCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHH
Confidence                                  445777777776543332  23346899999999999989999999999999999999


Q ss_pred             hCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchh
Q 017021          264 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  343 (379)
Q Consensus       264 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (379)
                      +|..|+....  .....+..  +.                                                 .....+.
T Consensus       216 ~~~~~~~~~~--~~~~~~~~--~~-------------------------------------------------~~~~~~~  242 (284)
T 2a19_B          216 HVCDTAFETS--KFFTDLRD--GI-------------------------------------------------ISDIFDK  242 (284)
T ss_dssp             SCCSSHHHHH--HHHHHHHT--TC-------------------------------------------------CCTTSCH
T ss_pred             hcCCcchhHH--HHHHHhhc--cc-------------------------------------------------ccccCCH
Confidence            9988774211  11100000  00                                                 0123567


Q ss_pred             HHHHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          344 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       344 ~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      .+.++|.+||+.||.+|||+.|+++|.+.-..
T Consensus       243 ~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          243 KEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence            78999999999999999999999999765443

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=4.8e-42  Score=310.49  Aligned_cols=247  Identities=15%  Similarity=0.120  Sum_probs=197.3

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      .+....|++.+.||+|+||.||+|++.  ++.||+|++....   .....+.+|+.++.++     .|+|++++++++.+
T Consensus         6 ~i~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~   78 (271)
T 3kmu_A            6 GIDFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-----SHPNVLPVLGACQS   78 (271)
T ss_dssp             CCCGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCC-----SCTTEECEEEEECT
T ss_pred             CCCHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhc-----CCCchhheEEEEcc
Confidence            455667899999999999999999875  7889999997432   2334566677766665     68999999999987


Q ss_pred             c--ceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecccccccCCCc
Q 017021          116 R--NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       116 ~--~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                      .  +..++||||+ +++|.+++.......+++..+..++.|++.||.|||+.|  ++||||||+||++            
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~------------  146 (271)
T 3kmu_A           79 PPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMI------------  146 (271)
T ss_dssp             TTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEE------------
T ss_pred             CCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEE------------
Confidence            7  7899999999 889999998866456899999999999999999999999  9999999999999            


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCC---ccchHhHHHHHHHHHhCCC
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTY---PCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDvwSlG~il~~l~~g~~  267 (379)
                                     +.++.++|+|||++.....  ....||+.|+|||.+.+..++.   ++|||||||++|+|++|+.
T Consensus       147 ---------------~~~~~~~l~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~  209 (271)
T 3kmu_A          147 ---------------DEDMTARISMADVKFSFQS--PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREV  209 (271)
T ss_dssp             ---------------CTTSCEEEEGGGSCCTTSC--TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSC
T ss_pred             ---------------cCCcceeEEeccceeeecc--cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence                           4555677777776543222  3346899999999998765544   7999999999999999999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ||...+..+....+......+                     .                          .....++.+.+
T Consensus       210 p~~~~~~~~~~~~~~~~~~~~---------------------~--------------------------~~~~~~~~~~~  242 (271)
T 3kmu_A          210 PFADLSNMEIGMKVALEGLRP---------------------T--------------------------IPPGISPHVSK  242 (271)
T ss_dssp             TTTTSCHHHHHHHHHHSCCCC---------------------C--------------------------CCTTCCHHHHH
T ss_pred             CccccChHHHHHHHHhcCCCC---------------------C--------------------------CCCCCCHHHHH
Confidence            998766655443332211110                     0                          01235678999


Q ss_pred             HHhhccccCCCCCcCHHHHhc
Q 017021          348 LLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~  368 (379)
                      +|.+||+.||++|||++|+++
T Consensus       243 li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          243 LMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999985

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.4e-42  Score=322.38  Aligned_cols=254  Identities=26%  Similarity=0.355  Sum_probs=181.9

Q ss_pred             eeeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           35 ITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        35 ~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      .+.+.+....|++.++||+|+||.||+|++..+++.||+|++... ......+.+|+.++.++.    +|+|++++++++
T Consensus        20 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~----~h~~iv~~~~~~   95 (337)
T 3ll6_A           20 GQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS----GHPNIVQFCSAA   95 (337)
T ss_dssp             TCEEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHT----TSTTBCCEEEEE
T ss_pred             cceeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhc----cCCChhhccccc
Confidence            455677788999999999999999999999999999999998543 333456678888888882    478999999888


Q ss_pred             --------eecceEEEEEeCCCCCHHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEeccc
Q 017021          114 --------DYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSE  182 (379)
Q Consensus       114 --------~~~~~~~lv~e~~~~sL~~~l~~-~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--iiH~dlkp~Nili~~~~  182 (379)
                              ......+++|||++++|.+++.. .....+++..+..++.||+.||.|||+.|  ++||||||+||+++.++
T Consensus        96 ~~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~  175 (337)
T 3ll6_A           96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQG  175 (337)
T ss_dssp             EECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTS
T ss_pred             cccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCC
Confidence                    34556899999998899999865 22236999999999999999999999999  99999999999995555


Q ss_pred             ccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC---------------CCcccccCCccchhhh---hCC
Q 017021          183 YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---------------QNYIVSTRHYRAPEVI---LGL  244 (379)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~---------------~~~~~gt~~y~aPE~~---~~~  244 (379)
                      .                           ++|+|||.+......               .....||+.|+|||++   .+.
T Consensus       176 ~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  228 (337)
T 3ll6_A          176 T---------------------------IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNF  228 (337)
T ss_dssp             C---------------------------EEBCCCTTCBCCSSCC-------------------------------CCTTS
T ss_pred             C---------------------------EEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccC
Confidence            4                           555555554432221               1134689999999998   456


Q ss_pred             CCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhh
Q 017021          245 GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSV  324 (379)
Q Consensus       245 ~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (379)
                      .++.++|||||||++|+|++|..||..........   ..                        ...+            
T Consensus       229 ~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~---~~------------------------~~~~------------  269 (337)
T 3ll6_A          229 PIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVN---GK------------------------YSIP------------  269 (337)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHSSCCC---------------------------------------CCCC------------
T ss_pred             CCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhc---Cc------------------------ccCC------------
Confidence            68899999999999999999999996533221110   00                        0000            


Q ss_pred             ccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCC
Q 017021          325 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP  370 (379)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp  370 (379)
                                  .....+..+.+||.+||+.||.+|||++|+++|-
T Consensus       270 ------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l  303 (337)
T 3ll6_A          270 ------------PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQL  303 (337)
T ss_dssp             ------------TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             ------------cccccchHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence                        0123456788999999999999999999999763

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=3.3e-42  Score=313.41  Aligned_cols=247  Identities=26%  Similarity=0.358  Sum_probs=199.9

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .....|++.+.||+|+||.||+|.+. +++.||+|++.........+.+|+.++..+     .|+|++++++++.. +..
T Consensus        10 v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~-~~~   82 (279)
T 1qpc_A           10 VPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQL-----QHQRLVRLYAVVTQ-EPI   82 (279)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECS-SSC
T ss_pred             cCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhC-----CCcCcceEEEEEcC-CCc
Confidence            34567899999999999999999975 567899999986655567788899999988     67999999998764 458


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      ++||||+ +++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||++                    
T Consensus        83 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~--------------------  142 (279)
T 1qpc_A           83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--------------------  142 (279)
T ss_dssp             EEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE--------------------
T ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEE--------------------
Confidence            9999999 8999999875432358999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCc
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  273 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~  273 (379)
                             +.++.++|+|||.+.......    ....+|..|+|||.+.+..++.++||||||+++|+|++ |..||.+.+
T Consensus       143 -------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~  215 (279)
T 1qpc_A          143 -------SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT  215 (279)
T ss_dssp             -------CTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             -------cCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC
Confidence                   455667888888776543322    22346778999999988889999999999999999999 999998766


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.+.....                                                .....+..+.++|.+||
T Consensus       216 ~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~l~~li~~~l  247 (279)
T 1qpc_A          216 NPEVIQNLERGYRMV------------------------------------------------RPDNCPEELYQLMRLCW  247 (279)
T ss_dssp             HHHHHHHHHTTCCCC------------------------------------------------CCTTCCHHHHHHHHHHT
T ss_pred             HHHHHHHHhcccCCC------------------------------------------------CcccccHHHHHHHHHHh
Confidence            655443332211100                                                01235678999999999


Q ss_pred             ccCCCCCcCHHHHhc
Q 017021          354 RYDPTDRLTAREALR  368 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~  368 (379)
                      +.||++|||++++++
T Consensus       248 ~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          248 KERPEDRPTFDYLRS  262 (279)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             ccChhhCCCHHHHHH
Confidence            999999999999875

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=8.8e-42  Score=318.96  Aligned_cols=253  Identities=19%  Similarity=0.267  Sum_probs=201.9

Q ss_pred             eeechhhhhhhhccccccceeEEEEEec-------CCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEE
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDR-------ERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQ  108 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~-------~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~  108 (379)
                      ..+....|++.+.||+|+||.||+|++.       .++..||+|+++...  .....+.+|+.++..+    ..|+||++
T Consensus        30 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l----~~hp~iv~  105 (334)
T 2pvf_A           30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI----GKHKNIIN  105 (334)
T ss_dssp             TBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHH----CCCTTBCC
T ss_pred             ccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHh----hcCCCEee
Confidence            3456678999999999999999999975       457789999997432  3345667888888887    35789999


Q ss_pred             ecceeeecceEEEEEeCC-CCCHHHHHHhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCC
Q 017021          109 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNY--------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKP  173 (379)
Q Consensus       109 ~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~--------------~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp  173 (379)
                      +++++...+..|+||||+ +++|.+++.....              ..+++..++.++.||+.||.|||+.|++||||||
T Consensus       106 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp  185 (334)
T 2pvf_A          106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA  185 (334)
T ss_dssp             EEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             EEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCcc
Confidence            999999999999999999 8899999986531              2488999999999999999999999999999999


Q ss_pred             CcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCC
Q 017021          174 ENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTY  248 (379)
Q Consensus       174 ~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~  248 (379)
                      +||++                           +.++.++|+|||.+.......     ....+|+.|+|||++.+..++.
T Consensus       186 ~NIll---------------------------~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  238 (334)
T 2pvf_A          186 RNVLV---------------------------TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH  238 (334)
T ss_dssp             GGEEE---------------------------CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECH
T ss_pred             ceEEE---------------------------cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcCh
Confidence            99999                           455667778888776443322     2234678899999998888999


Q ss_pred             ccchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccc
Q 017021          249 PCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL  327 (379)
Q Consensus       249 ~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (379)
                      ++|||||||++|+|++ |..||.+....+....+.......                      .                
T Consensus       239 ~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~----------------------~----------------  280 (334)
T 2pvf_A          239 QSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD----------------------K----------------  280 (334)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCC----------------------C----------------
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCC----------------------C----------------
Confidence            9999999999999999 999998766655444333321110                      0                


Q ss_pred             hhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          328 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                                ...++..+.++|.+||+.||.+|||++|++++
T Consensus       281 ----------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          281 ----------PANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             ----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                      11356789999999999999999999999864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=6.3e-42  Score=316.94  Aligned_cols=252  Identities=21%  Similarity=0.290  Sum_probs=198.7

Q ss_pred             eechhhhhhhhccccccceeEEEEEe-----cCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWD-----RERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~-----~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      .+....|++.+.||+|+||.||+|.+     ..+++.||+|++....  .....+.+|+.++..+    .+|+|++++++
T Consensus        23 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l----~~hp~iv~~~~   98 (316)
T 2xir_A           23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI----GHHLNVVNLLG   98 (316)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHH----CCCTTBCCEEE
T ss_pred             ecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhc----ccCCCeeeEEE
Confidence            45667899999999999999999984     4677999999997532  2345677888888888    35689999999


Q ss_pred             eeeec-ceEEEEEeCC-CCCHHHHHHhCCCC--------------CCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCc
Q 017021          112 WFDYR-NHICIVFEKL-GSSLYDFLRKNNYR--------------SFPIDLVREIARQLLECIAFMHDLCMIHTDLKPEN  175 (379)
Q Consensus       112 ~~~~~-~~~~lv~e~~-~~sL~~~l~~~~~~--------------~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~N  175 (379)
                      ++... ...++||||+ +++|.+++......              .+++..+..++.|++.||.|||+.|++||||||+|
T Consensus        99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~N  178 (316)
T 2xir_A           99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN  178 (316)
T ss_dssp             EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccce
Confidence            98765 4599999999 88999999875421              28899999999999999999999999999999999


Q ss_pred             EEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCcc
Q 017021          176 VLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPC  250 (379)
Q Consensus       176 ili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~s  250 (379)
                      |+++                           .++.++|+|||.+.......     ....||+.|+|||++.+..++.++
T Consensus       179 il~~---------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~  231 (316)
T 2xir_A          179 ILLS---------------------------EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS  231 (316)
T ss_dssp             EEEC---------------------------GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHH
T ss_pred             EEEC---------------------------CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchh
Confidence            9994                           44557777777765443322     234578899999999998999999


Q ss_pred             chHhHHHHHHHHHh-CCCCCCCCchHHHH-HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccch
Q 017021          251 DIWSVGCILVELCT-GEALFQTHENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP  328 (379)
Q Consensus       251 DvwSlG~il~~l~~-g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (379)
                      |||||||++|+|++ |..||.+....+.. ..+......                      ..                 
T Consensus       232 Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~----------------------~~-----------------  272 (316)
T 2xir_A          232 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM----------------------RA-----------------  272 (316)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCC----------------------CC-----------------
T ss_pred             HHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccC----------------------CC-----------------
Confidence            99999999999998 99999875533222 222111100                      00                 


Q ss_pred             hhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          329 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                               ....++.+.++|.+||+.||.+|||++|+++|
T Consensus       273 ---------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          273 ---------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             ---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                     11356789999999999999999999999976

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=2.5e-42  Score=321.62  Aligned_cols=261  Identities=22%  Similarity=0.266  Sum_probs=201.7

Q ss_pred             ceeeeeeeeeechhhhhhhhccccccceeEEEEEecCCCceE--EEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCe
Q 017021           30 NMFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMV--AIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNR  105 (379)
Q Consensus        30 ~~~~~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~v--AiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~  105 (379)
                      +--+...|..+....|++.+.||+|+||.||+|+++.++..+  |+|.++..  ......+.+|+.++.++    ..|+|
T Consensus        12 ~~~~~~~~p~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l----~~hp~   87 (327)
T 1fvr_A           12 NNPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL----GHHPN   87 (327)
T ss_dssp             ----CCCSSBCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTC----CCCTT
T ss_pred             CCCCCcccccccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhc----cCCCc
Confidence            333445566677778999999999999999999999888865  99998742  22344566777777665    36789


Q ss_pred             eEEecceeeecceEEEEEeCC-CCCHHHHHHhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccC
Q 017021          106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTD  170 (379)
Q Consensus       106 i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~--------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~d  170 (379)
                      ++++++++.+.+..|+||||+ +++|.+++....              ...+++..++.++.||+.||.|||+.|++|||
T Consensus        88 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~d  167 (327)
T 1fvr_A           88 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRD  167 (327)
T ss_dssp             BCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             hhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence            999999999999999999999 889999997643              23689999999999999999999999999999


Q ss_pred             CCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC--CCcccccCCccchhhhhCCCCCC
Q 017021          171 LKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTY  248 (379)
Q Consensus       171 lkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~  248 (379)
                      |||+||+++                           .++.++|+|||.+......  .....+|+.|+|||.+.+..++.
T Consensus       168 lkp~NIl~~---------------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  220 (327)
T 1fvr_A          168 LAARNILVG---------------------------ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTT  220 (327)
T ss_dssp             CSGGGEEEC---------------------------GGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECH
T ss_pred             CccceEEEc---------------------------CCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCc
Confidence            999999994                           4456777777776532221  12235678899999999888999


Q ss_pred             ccchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccc
Q 017021          249 PCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL  327 (379)
Q Consensus       249 ~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (379)
                      ++|||||||++|+|++ |..||.+.+..+....+.....                      ...                
T Consensus       221 ~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~----------------------~~~----------------  262 (327)
T 1fvr_A          221 NSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR----------------------LEK----------------  262 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC----------------------CCC----------------
T ss_pred             hhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCC----------------------CCC----------------
Confidence            9999999999999998 9999987665444332211100                      000                


Q ss_pred             hhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          328 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                                ....+..+.++|.+||+.||.+|||++|+++|
T Consensus       263 ----------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          263 ----------PLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             ----------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                      11356789999999999999999999999875

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=8.4e-42  Score=333.23  Aligned_cols=256  Identities=20%  Similarity=0.275  Sum_probs=198.5

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ...|++.++||+|+||.||+|++..+++.||||++.... ....+..|..++..+.+    ++++..+..+....+..++
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~----~~~i~~i~~~~~~~~~~~l   80 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQG----GTGIPNVRWFGVEGDYNVL   80 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTT----STTCCCEEEEEEETTEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcC----CCCCCeEEEEEeeCCEEEE
Confidence            456899999999999999999999999999999987433 34456778998888743    3456666666778889999


Q ss_pred             EEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          122 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      ||||++++|.+++.... ..+++..++.++.||+.||.|||+.||+||||||+|||+...                    
T Consensus        81 vme~~g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~--------------------  139 (483)
T 3sv0_A           81 VMDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG--------------------  139 (483)
T ss_dssp             EEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCG--------------------
T ss_pred             EEECCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecC--------------------
Confidence            99999999999998643 369999999999999999999999999999999999999421                    


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC----------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ----------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                          +..+.++|+|||++.......          ....||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus       140 ----~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~  215 (483)
T 3sv0_A          140 ----RRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG  215 (483)
T ss_dssp             ----GGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             ----CCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence                244567777777775433222          245799999999999999999999999999999999999999987


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .........+.+...                                         .............++.++.++|..
T Consensus       216 ~~~~~~~~~~~~i~~-----------------------------------------~~~~~~~~~l~~~~p~~l~~li~~  254 (483)
T 3sv0_A          216 LKAGTKKQKYEKISE-----------------------------------------KKVATSIEALCRGYPTEFASYFHY  254 (483)
T ss_dssp             CCCSSHHHHHHHHHH-----------------------------------------HHHHSCHHHHHTTSCHHHHHHHHH
T ss_pred             ccchhHHHHHHHHhh-----------------------------------------ccccccHHHHhcCCcHHHHHHHHH
Confidence            443221111111000                                         000011122234567899999999


Q ss_pred             ccccCCCCCcCHHHHhc
Q 017021          352 LLRYDPTDRLTAREALR  368 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~  368 (379)
                      ||+.||++||+++++++
T Consensus       255 cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          255 CRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHTCCTTCCCCHHHHHH
T ss_pred             HhcCChhhCcCHHHHHH
Confidence            99999999999998864

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1e-41  Score=318.46  Aligned_cols=250  Identities=20%  Similarity=0.273  Sum_probs=196.3

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCC----ceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERK----EMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~----~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      .+....|++.+.||+|+||.||+|.++.++    ..||+|++...  ......+.+|+.++..+     .|+|+++++++
T Consensus        40 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~  114 (333)
T 1mqb_A           40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-----SHHNIIRLEGV  114 (333)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEE
T ss_pred             cCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEE
Confidence            456677889999999999999999987654    45999999743  23345567788888877     78999999999


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                      +...+..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||+.|++||||||+||++             
T Consensus       115 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~-------------  180 (333)
T 1mqb_A          115 ISKYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV-------------  180 (333)
T ss_dssp             ECSSSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE-------------
T ss_pred             EecCCCcEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEE-------------
Confidence            99999999999999 889999998753 368999999999999999999999999999999999999             


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-  264 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-  264 (379)
                                    +.++.++|+|||.+.......      ....+|..|+|||.+.+..++.++|||||||++|+|++ 
T Consensus       181 --------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~  246 (333)
T 1mqb_A          181 --------------NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTY  246 (333)
T ss_dssp             --------------CTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             --------------CCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcC
Confidence                          455667777777776443321      11235778999999999899999999999999999998 


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |..||...+..+....+.......                      .                          ....+..
T Consensus       247 g~~pf~~~~~~~~~~~~~~~~~~~----------------------~--------------------------~~~~~~~  278 (333)
T 1mqb_A          247 GERPYWELSNHEVMKAINDGFRLP----------------------T--------------------------PMDCPSA  278 (333)
T ss_dssp             SCCTTTTCCHHHHHHHHHTTCCCC----------------------C--------------------------CTTCBHH
T ss_pred             CCCCcccCCHHHHHHHHHCCCcCC----------------------C--------------------------cccCCHH
Confidence            999998766555443332211100                      0                          1135678


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhcC
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      +.++|.+||+.||++|||+++++++
T Consensus       279 l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          279 IYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999999864

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=3.3e-42  Score=334.76  Aligned_cols=254  Identities=26%  Similarity=0.336  Sum_probs=201.2

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      .+....|++.++||+|+||.||+|.+.. +..||+|+++........+.+|+.++.++     .|+|++++++++.. +.
T Consensus       180 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~-~~  252 (452)
T 1fmk_A          180 EIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEKLVQLYAVVSE-EP  252 (452)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECS-SS
T ss_pred             ccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhC-----CCCCEeeEEEEEcC-Cc
Confidence            4566778999999999999999999875 45699999986555567788999999998     78999999998876 67


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .++||||+ +++|.+++.......+++..+..++.||+.||+|||++|++||||||+||+++.                 
T Consensus       253 ~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~-----------------  315 (452)
T 1fmk_A          253 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE-----------------  315 (452)
T ss_dssp             CEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG-----------------
T ss_pred             eEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECC-----------------
Confidence            89999999 899999997643345899999999999999999999999999999999999944                 


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH  272 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~  272 (379)
                                ++.++|+|||.+.......    ....+|..|+|||.+.+..++.++|||||||++|+|++ |..||.+.
T Consensus       316 ----------~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~  385 (452)
T 1fmk_A          316 ----------NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM  385 (452)
T ss_dssp             ----------GGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             ----------CCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC
Confidence                      4556777777665433221    12346778999999998899999999999999999999 99999887


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      ...+....+.+....                      +.                          ...++..+.++|.+|
T Consensus       386 ~~~~~~~~i~~~~~~----------------------~~--------------------------~~~~~~~l~~li~~c  417 (452)
T 1fmk_A          386 VNREVLDQVERGYRM----------------------PC--------------------------PPECPESLHDLMCQC  417 (452)
T ss_dssp             CHHHHHHHHHTTCCC----------------------CC--------------------------CTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCC----------------------CC--------------------------CCCCCHHHHHHHHHH
Confidence            665555443322111                      00                          123567899999999


Q ss_pred             cccCCCCCcCHHHHhc--CCCCCC
Q 017021          353 LRYDPTDRLTAREALR--HPFFTR  374 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~--hp~f~~  374 (379)
                      |+.||++|||++++++  ..++..
T Consensus       418 l~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          418 WRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             TCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             ccCChhhCcCHHHHHHHHHHHhcc
Confidence            9999999999999986  345543

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.7e-42  Score=312.88  Aligned_cols=249  Identities=24%  Similarity=0.311  Sum_probs=197.3

Q ss_pred             echhhhhhhh-ccccccceeEEEEEec--CCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           40 FSAFADKIHS-KMGEGTFGQVLECWDR--ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        40 ~~~~~y~i~~-~Lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      +....|.+.+ .||+|+||.||+|.++  .++..||+|+++..  ......+.+|+.++..+     .|+|++++++++ 
T Consensus         6 ~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~-   79 (287)
T 1u59_A            6 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-----DNPYIVRLIGVC-   79 (287)
T ss_dssp             CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEE-
T ss_pred             ccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhC-----CCCCEeEEEEEe-
Confidence            4455677776 9999999999999864  46788999999753  33456677899999888     689999999998 


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      ..+..++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++.+            
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~------------  146 (287)
T 1u59_A           80 QAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR------------  146 (287)
T ss_dssp             ESSSEEEEEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEET------------
T ss_pred             cCCCcEEEEEeCCCCCHHHHHHhCC-ccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCC------------
Confidence            456699999999 889999997543 358999999999999999999999999999999999999544            


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GE  266 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~  266 (379)
                                     +.++|+|||.+.......      ....+|+.|+|||.+.+..++.++|||||||++|+|++ |.
T Consensus       147 ---------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  211 (287)
T 1u59_A          147 ---------------HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ  211 (287)
T ss_dssp             ---------------TEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             ---------------CCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCC
Confidence                           456666666665433221      12346788999999988889999999999999999998 99


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||...+..+....+.+...                      ...                          ....++.+.
T Consensus       212 ~p~~~~~~~~~~~~i~~~~~----------------------~~~--------------------------~~~~~~~l~  243 (287)
T 1u59_A          212 KPYKKMKGPEVMAFIEQGKR----------------------MEC--------------------------PPECPPELY  243 (287)
T ss_dssp             CTTTTCCTHHHHHHHHTTCC----------------------CCC--------------------------CTTCCHHHH
T ss_pred             CCcccCCHHHHHHHHhcCCc----------------------CCC--------------------------CCCcCHHHH
Confidence            99987666554433322110                      000                          123567899


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHP  370 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp  370 (379)
                      ++|.+||+.||.+|||+.|+++|.
T Consensus       244 ~li~~~l~~~p~~Rps~~~l~~~l  267 (287)
T 1u59_A          244 ALMSDCWIYKWEDRPDFLTVEQRM  267 (287)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHH
Confidence            999999999999999999999764

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=1.7e-42  Score=315.24  Aligned_cols=247  Identities=22%  Similarity=0.307  Sum_probs=191.2

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee-ecc
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD-YRN  117 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~-~~~  117 (379)
                      .+....|++.+.||+|+||.||+|.+.  |+.||+|+++.. .....+.+|+.++..+     .|+|++++++++. ..+
T Consensus        17 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~   88 (278)
T 1byg_A           17 ALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-ATAQAFLAEASVMTQL-----RHSNLVQLLGVIVEEKG   88 (278)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC-C--HHHHHTHHHHTTC-----CCTTBCCEEEEECCC--
T ss_pred             cCChhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecch-hHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEcCCC
Confidence            455678899999999999999999864  789999999753 3456677888888877     6899999999864 445


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..++||||+ +++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||++                  
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~------------------  150 (278)
T 1byg_A           89 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV------------------  150 (278)
T ss_dssp             CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE------------------
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEE------------------
Confidence            799999999 7799999987542347899999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchH
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  275 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~  275 (379)
                               +.++.++|+|||.+...........+++.|+|||.+.+..++.++||||||+++|+|++ |..||...+..
T Consensus       151 ---------~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~  221 (278)
T 1byg_A          151 ---------SEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK  221 (278)
T ss_dssp             ---------CTTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG
T ss_pred             ---------eCCCcEEEeeccccccccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence                     55567888888887765554445567889999999998899999999999999999998 99999865543


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.+...                      ..                          .....++.+.++|.+||+.
T Consensus       222 ~~~~~~~~~~~----------------------~~--------------------------~~~~~~~~l~~li~~~l~~  253 (278)
T 1byg_A          222 DVVPRVEKGYK----------------------MD--------------------------APDGCPPAVYEVMKNCWHL  253 (278)
T ss_dssp             GHHHHHTTTCC----------------------CC--------------------------CCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHhcCCC----------------------CC--------------------------CcccCCHHHHHHHHHHhcC
Confidence            33322211100                      00                          0123567899999999999


Q ss_pred             CCCCCcCHHHHhc
Q 017021          356 DPTDRLTAREALR  368 (379)
Q Consensus       356 dP~~Rpta~e~l~  368 (379)
                      ||++|||+.|+++
T Consensus       254 ~p~~Rps~~~l~~  266 (278)
T 1byg_A          254 DAAMRPSFLQLRE  266 (278)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             ChhhCCCHHHHHH
Confidence            9999999999975

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=5.6e-42  Score=319.44  Aligned_cols=247  Identities=20%  Similarity=0.241  Sum_probs=192.8

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceE----EEEEeec--cchhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMV----AIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~v----AiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      +....|++.++||+|+||.||+|++..+++.+    |+|.+..  .......+.+|+.++..+     .|+|++++++++
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~   86 (327)
T 3lzb_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-----DNPHVCRLLGIC   86 (327)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTC-----CBTTBCCCCEEE
T ss_pred             cCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhC-----CCCCeeEEEEEE
Confidence            45677899999999999999999998888765    6666642  233456677888888877     689999999999


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      ..+. .+++++++ +++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||+++.+           
T Consensus        87 ~~~~-~~~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~-----------  153 (327)
T 3lzb_A           87 LTST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-----------  153 (327)
T ss_dssp             ESSS-EEEEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET-----------
T ss_pred             ecCC-ceEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCC-----------
Confidence            8765 77888888 999999998754 358999999999999999999999999999999999999544           


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GE  266 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~  266 (379)
                                      +.++|+|||.+.......     ....+|+.|+|||.+.+..++.++|||||||++|+|++ |.
T Consensus       154 ----------------~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~  217 (327)
T 3lzb_A          154 ----------------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS  217 (327)
T ss_dssp             ----------------TEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             ----------------CCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCC
Confidence                            456677777665433222     12346778999999999999999999999999999999 99


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||.+....+....+.......                      .                          ....+.++.
T Consensus       218 ~p~~~~~~~~~~~~~~~~~~~~----------------------~--------------------------~~~~~~~l~  249 (327)
T 3lzb_A          218 KPYDGIPASEISSILEKGERLP----------------------Q--------------------------PPICTIDVY  249 (327)
T ss_dssp             CTTTTCCGGGHHHHHHTTCCCC----------------------C--------------------------CTTBCHHHH
T ss_pred             CCCCCCCHHHHHHHHHcCCCCC----------------------C--------------------------CccCCHHHH
Confidence            9998766555443332221110                      0                          123567899


Q ss_pred             HHHhhccccCCCCCcCHHHHhc
Q 017021          347 HLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      ++|.+||+.||.+|||+.|+++
T Consensus       250 ~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          250 MIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHH
Confidence            9999999999999999999985

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=1e-41  Score=310.61  Aligned_cols=249  Identities=22%  Similarity=0.293  Sum_probs=196.5

Q ss_pred             eechhhhhhhhccccccceeEEEEEecC---CCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRE---RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~---~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      .+....|++.+.||+|+||.||+|.+..   ++..||+|++...  ......+.+|+.++..+     .|+|++++++++
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~   82 (281)
T 3cc6_A            8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-----DHPHIVKLIGII   82 (281)
T ss_dssp             SCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-----CCTTBCCEEEEE
T ss_pred             eecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhC-----CCCCcceEEEEE
Confidence            4556788999999999999999998654   3456999998743  23456677899999998     689999999988


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      ..+ ..|+||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++.+           
T Consensus        83 ~~~-~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~-----------  149 (281)
T 3cc6_A           83 EEE-PTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASP-----------  149 (281)
T ss_dssp             CSS-SCEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEET-----------
T ss_pred             cCC-CCEEEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCC-----------
Confidence            754 568999999 899999997754 358999999999999999999999999999999999999544           


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEA  267 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~  267 (379)
                                      +.++|+|||.+.......    ....+|+.|+|||.+.+..++.++|||||||++|+|++ |+.
T Consensus       150 ----------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~  213 (281)
T 3cc6_A          150 ----------------ECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQ  213 (281)
T ss_dssp             ----------------TEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ----------------CcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCC
Confidence                            456777777665433322    22346788999999998899999999999999999998 999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ||......+....+.......                      .                          ....++.+.+
T Consensus       214 p~~~~~~~~~~~~~~~~~~~~----------------------~--------------------------~~~~~~~l~~  245 (281)
T 3cc6_A          214 PFFWLENKDVIGVLEKGDRLP----------------------K--------------------------PDLCPPVLYT  245 (281)
T ss_dssp             TTTTSCGGGHHHHHHHTCCCC----------------------C--------------------------CTTCCHHHHH
T ss_pred             CcccCChHHHHHHHhcCCCCC----------------------C--------------------------CCCCCHHHHH
Confidence            998655544443332221110                      0                          1135678999


Q ss_pred             HHhhccccCCCCCcCHHHHhcC
Q 017021          348 LLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      +|.+||+.||++|||++|++++
T Consensus       246 li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          246 LMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHccCCchhCcCHHHHHHH
Confidence            9999999999999999999864

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=3.4e-42  Score=319.82  Aligned_cols=251  Identities=22%  Similarity=0.297  Sum_probs=201.3

Q ss_pred             eechhhhhhhhccccccceeEEEEEec-----CCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      ......|++.+.||+|+||.||+|.++     .+++.||+|++....  .....+.+|+.++..+     .|+|++++++
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~   95 (322)
T 1p4o_A           21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-----NCHHVVRLLG   95 (322)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-----CCTTBCCEEE
T ss_pred             cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhc-----CCCCEeeeEE
Confidence            455678999999999999999999876     467889999997432  2334566788877776     7899999999


Q ss_pred             eeeecceEEEEEeCC-CCCHHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccc
Q 017021          112 WFDYRNHICIVFEKL-GSSLYDFLRKNN--------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE  182 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~~sL~~~l~~~~--------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~  182 (379)
                      ++.+.+..++||||+ +++|.+++....        ...+++..+..++.||+.||.|||+.|++||||||+||++    
T Consensus        96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli----  171 (322)
T 1p4o_A           96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV----  171 (322)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE----
T ss_pred             EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEE----
Confidence            999999999999999 889999997532        1246899999999999999999999999999999999999    


Q ss_pred             ccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHH
Q 017021          183 YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGC  257 (379)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~  257 (379)
                                             +.++.++|+|||.+.......     ....+|+.|+|||.+.+..++.++|||||||
T Consensus       172 -----------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  228 (322)
T 1p4o_A          172 -----------------------AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV  228 (322)
T ss_dssp             -----------------------CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             -----------------------cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHH
Confidence                                   455667888888776433221     2235688899999999888999999999999


Q ss_pred             HHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHH
Q 017021          258 ILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ  336 (379)
Q Consensus       258 il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (379)
                      ++|+|++ |..||...+..+....+.+...                      ...                         
T Consensus       229 il~el~~~g~~p~~~~~~~~~~~~~~~~~~----------------------~~~-------------------------  261 (322)
T 1p4o_A          229 VLWEIATLAEQPYQGLSNEQVLRFVMEGGL----------------------LDK-------------------------  261 (322)
T ss_dssp             HHHHHHHTSCCTTTTSCHHHHHHHHHTTCC----------------------CCC-------------------------
T ss_pred             HHHHHHhcCCCccccCCHHHHHHHHHcCCc----------------------CCC-------------------------
Confidence            9999999 8999987665444333222110                      000                         


Q ss_pred             hhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       337 ~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                       ....+..+.++|.+||+.||.+|||+.|+++|
T Consensus       262 -~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          262 -PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             -CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence             12356789999999999999999999999987

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=8.6e-42  Score=312.77  Aligned_cols=248  Identities=22%  Similarity=0.314  Sum_probs=196.1

Q ss_pred             eeechhhhhhhh-ccccccceeEEEEE--ecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           38 IVFSAFADKIHS-KMGEGTFGQVLECW--DRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        38 ~~~~~~~y~i~~-~Lg~G~~g~V~~~~--~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      ..+....|++.+ .||+|+||.||+|.  +..+++.||+|+++...   .....+.+|+.++..+     .|+|++++++
T Consensus        11 ~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~   85 (291)
T 1xbb_A           11 VYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-----DNPYIVRMIG   85 (291)
T ss_dssp             CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-----CCTTBCCEEE
T ss_pred             eeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-----CCCCEEEEEE
Confidence            345567788888 99999999999994  45678999999997432   2345677788888887     6899999999


Q ss_pred             eeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCc
Q 017021          112 WFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                      ++ ..+..++||||+ +++|.+++....  .+++..+..++.||+.||.|||+.|++||||||+||+++.+         
T Consensus        86 ~~-~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~---------  153 (291)
T 1xbb_A           86 IC-EAESWMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ---------  153 (291)
T ss_dssp             EE-ESSSEEEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET---------
T ss_pred             EE-CCCCcEEEEEeCCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCC---------
Confidence            98 566789999999 899999998764  68999999999999999999999999999999999999544         


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCC------cccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN------YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~  264 (379)
                                        +.++|+|||.+........      ...+|+.|+|||.+.+..++.++||||||+++|+|++
T Consensus       154 ------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  215 (291)
T 1xbb_A          154 ------------------HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS  215 (291)
T ss_dssp             ------------------TEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT
T ss_pred             ------------------CcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHh
Confidence                              4566666666654333221      1235678999999988888999999999999999999


Q ss_pred             -CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchh
Q 017021          265 -GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  343 (379)
Q Consensus       265 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (379)
                       |..||...+..+....+.....+                      ..                          ...++.
T Consensus       216 ~g~~p~~~~~~~~~~~~~~~~~~~----------------------~~--------------------------~~~~~~  247 (291)
T 1xbb_A          216 YGQKPYRGMKGSEVTAMLEKGERM----------------------GC--------------------------PAGCPR  247 (291)
T ss_dssp             TTCCSSTTCCHHHHHHHHHTTCCC----------------------CC--------------------------CTTCCH
T ss_pred             cCCCCCCCCCHHHHHHHHHcCCCC----------------------CC--------------------------CCCCCH
Confidence             99999877665544333221100                      00                          123567


Q ss_pred             HHHHHHhhccccCCCCCcCHHHHhc
Q 017021          344 DLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       344 ~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      .+.++|.+||+.||.+|||+.++++
T Consensus       248 ~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          248 EMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHH
Confidence            8999999999999999999999974

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.1e-43  Score=334.96  Aligned_cols=279  Identities=20%  Similarity=0.323  Sum_probs=204.5

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc-
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN-  117 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~-  117 (379)
                      .+..|++.++||+|+||.||+|+++.+++.||+|+++...  .....+.+|+.++..+     .|+|++++++++...+ 
T Consensus         7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~~~~~~   81 (396)
T 4eut_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-----NHKNIVKLFAIEEETTT   81 (396)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-----CCTTBCCEEEEEECTTT
T ss_pred             CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-----CCCCCCeEEEeeccCCC
Confidence            4567999999999999999999999999999999997432  2345667899999888     6899999999988654 


Q ss_pred             -eEEEEEeCC-CCCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          118 -HICIVFEKL-GSSLYDFLRKNN-YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       118 -~~~lv~e~~-~~sL~~~l~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                       ..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+.||+||||||+||++....            
T Consensus        82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~------------  149 (396)
T 4eut_A           82 RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE------------  149 (396)
T ss_dssp             CCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECT------------
T ss_pred             CeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecC------------
Confidence             789999999 899999997643 12389999999999999999999999999999999999983321            


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhC--------CCCCCccchHhHHHHHHHHHh
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG--------LGWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~--------~~~~~~sDvwSlG~il~~l~~  264 (379)
                                 +....++|+|||.+.......  ....||+.|+|||++.+        ..++.++|||||||++|+|++
T Consensus       150 -----------~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~t  218 (396)
T 4eut_A          150 -----------DGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT  218 (396)
T ss_dssp             -----------TSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCceeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHH
Confidence                       345568999999887544432  34578999999999865        457789999999999999999


Q ss_pred             CCCCCCCCch-HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchh
Q 017021          265 GEALFQTHEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  343 (379)
Q Consensus       265 g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (379)
                      |+.||..... ......+.+.....|...+..+...     .++...|......                ........+.
T Consensus       219 g~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-----~~~~~~~~~~~~~----------------~~~l~~~~~~  277 (396)
T 4eut_A          219 GSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKA-----ENGPIDWSGDMPV----------------SCSLSRGLQV  277 (396)
T ss_dssp             SSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECS-----TTCCEEEESSCCT----------------TCSSCHHHHH
T ss_pred             CCCCCCCCCcccchHHHHHHHhcCCCcccchhheec-----cCCCcccCccCCc----------------ccccchHHHh
Confidence            9999975322 1111222222222222211111110     0111111110000                0011223567


Q ss_pred             HHHHHHhhccccCCCCCcCHHHHhc
Q 017021          344 DLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       344 ~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      .+.++|++||+.||++|||++|+++
T Consensus       278 ~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          278 LLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             HHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             hchHHHHHhhccChhhhccHHHHHH
Confidence            8999999999999999999999864

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.4e-41  Score=310.49  Aligned_cols=248  Identities=19%  Similarity=0.250  Sum_probs=193.1

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCc---eEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKE---MVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~---~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      .....|++.++||+|+||.||+|.+..+++   .||+|++....  .....+.+|+.++..+     .|+|++++++++.
T Consensus        18 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~   92 (298)
T 3pls_A           18 HERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-----NHPNVLALIGIML   92 (298)
T ss_dssp             GGGEEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-----CCTTBCCCCEEEC
T ss_pred             ccceEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhC-----CCCCeeeEEEEEe
Confidence            444566777999999999999999765544   79999987432  2345667788888887     7899999999998


Q ss_pred             ecceE-EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          115 YRNHI-CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       115 ~~~~~-~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      +.+.. +++|||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||++              
T Consensus        93 ~~~~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili--------------  157 (298)
T 3pls_A           93 PPEGLPHVLLPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML--------------  157 (298)
T ss_dssp             CSSSCCEEEECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE--------------
T ss_pred             cCCCCcEEEEecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE--------------
Confidence            66554 9999999 999999997743 468999999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCC-------CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-------DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG  265 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g  265 (379)
                                   +.++.++|+|||.+.....       ......+|+.|+|||.+.+..++.++|||||||++|+|++|
T Consensus       158 -------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  224 (298)
T 3pls_A          158 -------------DESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTR  224 (298)
T ss_dssp             -------------CTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHT
T ss_pred             -------------cCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhC
Confidence                         4455677777777653322       12334678899999999998999999999999999999995


Q ss_pred             -CCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          266 -EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       266 -~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                       .+||...+..+....+........                                                ....+..
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~  256 (298)
T 3pls_A          225 GAPPYRHIDPFDLTHFLAQGRRLPQ------------------------------------------------PEYCPDS  256 (298)
T ss_dssp             SCCTTTTSCGGGHHHHHHTTCCCCC------------------------------------------------CTTCCHH
T ss_pred             CCCCCccCCHHHHHHHhhcCCCCCC------------------------------------------------CccchHH
Confidence             555555444443332222111100                                                1235678


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhc
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      +.++|.+||+.||.+|||++++++
T Consensus       257 l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          257 LYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHH
Confidence            999999999999999999999875

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=1e-41  Score=313.14  Aligned_cols=250  Identities=17%  Similarity=0.211  Sum_probs=193.6

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCC---CceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRER---KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      +......|++.+.||+|+||.||+|.+..+   +..+|+|.++..  ......+.+|+.++.++     .|+|+++++++
T Consensus        20 i~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~   94 (298)
T 3f66_A           20 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-----SHPNVLSLLGI   94 (298)
T ss_dssp             CCGGGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-----CCTTBCCCCEE
T ss_pred             cCccceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhC-----CCCCEeeeeeE
Confidence            344566789999999999999999987544   346899998742  23345667788888877     68999999998


Q ss_pred             -eeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCc
Q 017021          113 -FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       113 -~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                       +..++..++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||++            
T Consensus        95 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~------------  161 (298)
T 3f66_A           95 CLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML------------  161 (298)
T ss_dssp             ECCSSSCCEEEEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE------------
T ss_pred             EEcCCCceEEEEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE------------
Confidence             45667899999999 889999997644 358999999999999999999999999999999999999            


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCC-------CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHH
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC  263 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~  263 (379)
                                     +.++.++|+|||.+......       .....+|+.|+|||.+.+..++.++|||||||++|+|+
T Consensus       162 ---------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  226 (298)
T 3f66_A          162 ---------------DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM  226 (298)
T ss_dssp             ---------------CTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             ---------------CCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHH
Confidence                           44556777777776543222       12245778899999999989999999999999999999


Q ss_pred             h-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccch
Q 017021          264 T-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  342 (379)
Q Consensus       264 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (379)
                      + |.+||...+..+....+.+......                                                ....+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~  258 (298)
T 3f66_A          227 TRGAPPYPDVNTFDITVYLLQGRRLLQ------------------------------------------------PEYCP  258 (298)
T ss_dssp             TTSCCSSTTSCTTTHHHHHHTTCCCCC------------------------------------------------CTTCC
T ss_pred             hCCCCCCccCCHHHHHHHHhcCCCCCC------------------------------------------------CccCC
Confidence            9 6677766554443333222111110                                                11356


Q ss_pred             hHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          343 GDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       343 ~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      ..+.++|.+||+.||.+|||++|+++
T Consensus       259 ~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          259 DPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            78999999999999999999999985

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-41  Score=313.84  Aligned_cols=247  Identities=25%  Similarity=0.376  Sum_probs=188.6

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      +....|++.+.||+|+||.||+|.+.  ++.||+|++.. ......+.+|+.++.++     .|+|++++++++.+  ..
T Consensus         5 i~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~-~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~--~~   74 (307)
T 2eva_A            5 IDYKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIES-ESERKAFIVELRQLSRV-----NHPNIVKLYGACLN--PV   74 (307)
T ss_dssp             CCGGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSS-TTHHHHHHHHHHHHHHC-----CCTTBCCEEEBCTT--TT
T ss_pred             CCHhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecC-hhHHHHHHHHHHHHhcC-----CCCCcCeEEEEEcC--Cc
Confidence            34567889999999999999999864  68899999974 34456778899999888     78999999998864  47


Q ss_pred             EEEEeCC-CCCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHH---cCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNY-RSFPIDLVREIARQLLECIAFMHD---LCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~---~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      ++||||+ +++|.+++..... ..++...+..++.|++.||.|||+   .|++||||||+||+++.++            
T Consensus        75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~------------  142 (307)
T 2eva_A           75 CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG------------  142 (307)
T ss_dssp             EEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTT------------
T ss_pred             EEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCC------------
Confidence            9999999 8999999986531 136889999999999999999999   8999999999999995322            


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                                    ..++|+|||.+...........||+.|+|||++.+..++.++|||||||++|+|++|+.||.....
T Consensus       143 --------------~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~  208 (307)
T 2eva_A          143 --------------TVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG  208 (307)
T ss_dssp             --------------TEEEECCCCC------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS
T ss_pred             --------------CEEEEcccccccccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc
Confidence                          237888888887655544455799999999999998999999999999999999999999975432


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      ...........+..+                    .                          .....+..+.++|.+||+
T Consensus       209 ~~~~~~~~~~~~~~~--------------------~--------------------------~~~~~~~~l~~li~~~l~  242 (307)
T 2eva_A          209 PAFRIMWAVHNGTRP--------------------P--------------------------LIKNLPKPIESLMTRCWS  242 (307)
T ss_dssp             SHHHHHHHHHTTCCC--------------------C--------------------------CBTTCCHHHHHHHHHHTC
T ss_pred             cHHHHHHHHhcCCCC--------------------C--------------------------cccccCHHHHHHHHHHhc
Confidence            211110000001100                    0                          012356789999999999


Q ss_pred             cCCCCCcCHHHHhc
Q 017021          355 YDPTDRLTAREALR  368 (379)
Q Consensus       355 ~dP~~Rpta~e~l~  368 (379)
                      .||++|||++|+++
T Consensus       243 ~dp~~Rps~~ell~  256 (307)
T 2eva_A          243 KDPSQRPSMEEIVK  256 (307)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999987

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=6.2e-42  Score=315.11  Aligned_cols=267  Identities=24%  Similarity=0.330  Sum_probs=200.1

Q ss_pred             eeeeechhhhhhhhccccccceeEEEEE----ecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEe
Q 017021           36 TYIVFSAFADKIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQI  109 (379)
Q Consensus        36 ~~~~~~~~~y~i~~~Lg~G~~g~V~~~~----~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~  109 (379)
                      ....+....|++.++||+|+||.||+|+    +..+++.||+|++....  .....+.+|+.++..+     .|+|++++
T Consensus        14 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~   88 (302)
T 4e5w_A           14 DPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-----YHENIVKY   88 (302)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTC-----CCTTBCCE
T ss_pred             ChhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhC-----CCCCeeee
Confidence            3344556779999999999999999998    67789999999997432  2345677888888887     68999999


Q ss_pred             cceeeec--ceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccccccc
Q 017021          110 RNWFDYR--NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV  186 (379)
Q Consensus       110 ~~~~~~~--~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~  186 (379)
                      ++++...  ...++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++.      
T Consensus        89 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~------  161 (302)
T 4e5w_A           89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES------  161 (302)
T ss_dssp             EEEEEC---CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE------
T ss_pred             eeEEecCCCceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcC------
Confidence            9998876  6789999999 889999996643 35899999999999999999999999999999999999954      


Q ss_pred             CCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHH
Q 017021          187 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILV  260 (379)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~  260 (379)
                                           ++.++|+|||.+.......      ....||..|+|||.+.+..++.++|||||||++|
T Consensus       162 ---------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  220 (302)
T 4e5w_A          162 ---------------------EHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLH  220 (302)
T ss_dssp             ---------------------TTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHH
T ss_pred             ---------------------CCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHH
Confidence                                 4456777777765443322      2345788899999999888999999999999999


Q ss_pred             HHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc
Q 017021          261 ELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  340 (379)
Q Consensus       261 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (379)
                      +|++|..|+....     .......++.......  ...............                          ...
T Consensus       221 ~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--------------------------~~~  267 (302)
T 4e5w_A          221 ELLTYCDSDSSPM-----ALFLKMIGPTHGQMTV--TRLVNTLKEGKRLPC--------------------------PPN  267 (302)
T ss_dssp             HHHTTTCGGGSHH-----HHHHHHHCSCCGGGHH--HHHHHHHHTTCCCCC--------------------------CTT
T ss_pred             HHHHccCCCcchh-----hHHhhccCCcccccCH--HHHHHHHhccCCCCC--------------------------CCC
Confidence            9999999875321     1122222232222111  011111111111111                          124


Q ss_pred             chhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          341 SAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       341 ~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      +++.+.++|.+||+.||.+|||++|+++
T Consensus       268 ~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          268 CPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             CCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            6788999999999999999999999985

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=1.4e-41  Score=314.59  Aligned_cols=261  Identities=17%  Similarity=0.220  Sum_probs=196.4

Q ss_pred             cceeeeeeeeeechhhhhhhhccccccceeEEEEEecC---CCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCC
Q 017021           29 CNMFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRE---RKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKG  102 (379)
Q Consensus        29 ~~~~~~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~---~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~  102 (379)
                      .+..+......+....|++.+.||+|+||.||+|.+..   ++..||+|+++..   ......+.+|+.++..+     .
T Consensus        20 eel~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~   94 (313)
T 3brb_A           20 EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-----S   94 (313)
T ss_dssp             ----CCTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC-----C
T ss_pred             HhhhhhHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcC-----C
Confidence            44555566677788899999999999999999998765   5668999998743   22335567788888877     6


Q ss_pred             CCeeEEecceeeecc-----eEEEEEeCC-CCCHHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Q 017021          103 GNRCVQIRNWFDYRN-----HICIVFEKL-GSSLYDFLRKN----NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLK  172 (379)
Q Consensus       103 ~~~i~~~~~~~~~~~-----~~~lv~e~~-~~sL~~~l~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlk  172 (379)
                      |+|++++++++....     ..++||||+ +++|.+++...    ....+++..++.++.||+.||.|||+.|++|||||
T Consensus        95 h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dik  174 (313)
T 3brb_A           95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLA  174 (313)
T ss_dssp             CTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCS
T ss_pred             CCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            899999999987654     469999999 88999998542    22468999999999999999999999999999999


Q ss_pred             CCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCC
Q 017021          173 PENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWT  247 (379)
Q Consensus       173 p~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~  247 (379)
                      |+||++                           +.++.++|+|||.+.......     ....+++.|+|||.+.+..++
T Consensus       175 p~NIli---------------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  227 (313)
T 3brb_A          175 ARNCML---------------------------RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYT  227 (313)
T ss_dssp             GGGEEE---------------------------CTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCC
T ss_pred             cceEEE---------------------------cCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCcc
Confidence            999999                           455567777777775433221     223567889999999999999


Q ss_pred             CccchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhcc
Q 017021          248 YPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK  326 (379)
Q Consensus       248 ~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (379)
                      .++|||||||++|+|++ |..||......+....+......                      ..               
T Consensus       228 ~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------~~---------------  270 (313)
T 3brb_A          228 SKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRL----------------------KQ---------------  270 (313)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC----------------------CC---------------
T ss_pred             chhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCC----------------------CC---------------
Confidence            99999999999999999 89999876654443322221100                      00               


Q ss_pred             chhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          327 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                                 ....+..+.++|.+||+.||.+|||+++++++
T Consensus       271 -----------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          271 -----------PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             -----------BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             -----------CccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                       12356789999999999999999999999864

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=6.1e-42  Score=318.21  Aligned_cols=265  Identities=22%  Similarity=0.241  Sum_probs=197.7

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      ....|++.+.||+|+||.||+|+++ +++.||+|++.... .....+.+|+.++..+     .|+|++++++++...+..
T Consensus        37 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~  110 (321)
T 2qkw_B           37 ATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFC-----RHPHLVSLIGFCDERNEM  110 (321)
T ss_dssp             CCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSC-----CCTTBCCEEEECCCTTCC
T ss_pred             HHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEcCCCeE
Confidence            3457899999999999999999964 68899999987432 2345566787777666     689999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNY--RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ++||||+ +++|.+++.....  ..+++..+..++.|++.||.|||+.|++||||||+||++                  
T Consensus       111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~------------------  172 (321)
T 2qkw_B          111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL------------------  172 (321)
T ss_dssp             EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEE------------------
T ss_pred             EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEE------------------
Confidence            9999999 8999999865432  248999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                               +.++.++|+|||.+......     .....||+.|+|||.+.+..++.++|||||||++|+|++|+.||..
T Consensus       173 ---------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~  243 (321)
T 2qkw_B          173 ---------DENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ  243 (321)
T ss_dssp             ---------CTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSC
T ss_pred             ---------CCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccc
Confidence                     45567788888877543221     1234689999999999888899999999999999999999999976


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      ....+......                ........+.+...            +. +..   ........+..+.+++.+
T Consensus       244 ~~~~~~~~~~~----------------~~~~~~~~~~~~~~------------~~-~~~---~~~~~~~~~~~l~~li~~  291 (321)
T 2qkw_B          244 SLPREMVNLAE----------------WAVESHNNGQLEQI------------VD-PNL---ADKIRPESLRKFGDTAVK  291 (321)
T ss_dssp             SSSSSCCCHHH----------------HTHHHHTTTCCCSS------------SS-SSC---TTCSCHHHHHHHHHHHHH
T ss_pred             cCcHHHHHHHH----------------HhhhccccccHHHh------------cC-hhh---ccccCHHHHHHHHHHHHH
Confidence            43211100000                00000000000000            00 000   000112356789999999


Q ss_pred             ccccCCCCCcCHHHHhcCC
Q 017021          352 LLRYDPTDRLTAREALRHP  370 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp  370 (379)
                      ||+.||++|||++|+++|.
T Consensus       292 ~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          292 CLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             HTCSSGGGSCCHHHHHHHH
T ss_pred             HcCCCcccCcCHHHHHHHH
Confidence            9999999999999999763

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=2.2e-41  Score=312.74  Aligned_cols=248  Identities=26%  Similarity=0.390  Sum_probs=188.3

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ..|++.+.||+|+||.||+|.+..+|+.||+|++...    ......+.+|+.++..+     .|+|++++++++...+.
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~  106 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-----NHPNVIKYYASFIEDNE  106 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEEETTE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEcCCc
Confidence            4689999999999999999999999999999998742    23445667788888877     68999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      .++||||+ +++|.+++...  ....+++..+..++.|++.||.|||+.|++||||||+||++                 
T Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~-----------------  169 (310)
T 2wqm_A          107 LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI-----------------  169 (310)
T ss_dssp             EEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE-----------------
T ss_pred             EEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEE-----------------
Confidence            99999999 88999998752  23468999999999999999999999999999999999999                 


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                +.++.++|+|||.+.......   ....||+.|+|||.+.+..++.++||||||+++|+|++|..||.+.
T Consensus       170 ----------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  239 (310)
T 2wqm_A          170 ----------TATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  239 (310)
T ss_dssp             ----------CTTSCEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred             ----------cCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence                      455667788888775433322   2346899999999999989999999999999999999999999754


Q ss_pred             ch--HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          273 EN--LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       273 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      ..  .+....+...  ..+                    ..+                         ....+.++.++|.
T Consensus       240 ~~~~~~~~~~~~~~--~~~--------------------~~~-------------------------~~~~~~~l~~li~  272 (310)
T 2wqm_A          240 KMNLYSLCKKIEQC--DYP--------------------PLP-------------------------SDHYSEELRQLVN  272 (310)
T ss_dssp             -CCHHHHHHHHHTT--CSC--------------------CCC-------------------------TTTSCHHHHHHHH
T ss_pred             chhHHHHHHHhhcc--cCC--------------------CCc-------------------------ccccCHHHHHHHH
Confidence            22  1111111110  000                    000                         1235678999999


Q ss_pred             hccccCCCCCcCHHHHhcC
Q 017021          351 GLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~h  369 (379)
                      +||+.||++|||+++++++
T Consensus       273 ~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          273 MCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCChhhCCCHHHHHHH
Confidence            9999999999999999853

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=3e-42  Score=324.53  Aligned_cols=254  Identities=15%  Similarity=0.136  Sum_probs=191.8

Q ss_pred             chhhhhhhhccccccceeEEEEEecCC--------CceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEE----
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRER--------KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ----  108 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~--------~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~----  108 (379)
                      ....|++.+.||+|+||.||+|++..+        ++.||+|++...    ..+.+|+.++.++     .|+|+++    
T Consensus        40 ~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l-----~h~niv~~~~~  110 (352)
T 2jii_A           40 SGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRA-----AKPLQVNKWKK  110 (352)
T ss_dssp             TSCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHH-----CCHHHHHHHHH
T ss_pred             cCCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHh-----cccchhhhhhh
Confidence            356899999999999999999999874        889999999743    3566789998888     4566655    


Q ss_pred             -----------ecceeee-cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcE
Q 017021          109 -----------IRNWFDY-RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENV  176 (379)
Q Consensus       109 -----------~~~~~~~-~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Ni  176 (379)
                                 +++++.. ++..|+||||++++|.+++.......+++..+..++.||+.||.|||+.||+||||||+||
T Consensus       111 ~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NI  190 (352)
T 2jii_A          111 LYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENI  190 (352)
T ss_dssp             HTTCTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGE
T ss_pred             hccCCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHE
Confidence                       5566655 6789999999999999999876334699999999999999999999999999999999999


Q ss_pred             EEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC----------CCcccccCCccchhhhhCCCC
Q 017021          177 LLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILGLGW  246 (379)
Q Consensus       177 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~  246 (379)
                      +++.++                         ...++|+|||.+......          .....||+.|+|||++.+..+
T Consensus       191 l~~~~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  245 (352)
T 2jii_A          191 FVDPED-------------------------QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGP  245 (352)
T ss_dssp             EEETTE-------------------------EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCC
T ss_pred             EEcCCC-------------------------CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCC
Confidence            996443                         015666666666432221          123478999999999999899


Q ss_pred             CCccchHhHHHHHHHHHhCCCCCCCCc--hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhh
Q 017021          247 TYPCDIWSVGCILVELCTGEALFQTHE--NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSV  324 (379)
Q Consensus       247 ~~~sDvwSlG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (379)
                      +.++|||||||++|+|++|..||....  ...............+..                    ...          
T Consensus       246 ~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~----------  295 (352)
T 2jii_A          246 SRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPF--------------------VGP----------  295 (352)
T ss_dssp             CHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCE--------------------ECT----------
T ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhh--------------------hhh----------
Confidence            999999999999999999999997643  222222211111111100                    000          


Q ss_pred             ccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          325 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                                ...+...+..+.++|.+||+.||.+|||++++++
T Consensus       296 ----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          296 ----------CGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             ----------TSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ----------ccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence                      0001235788999999999999999999999974

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=7.7e-42  Score=319.01  Aligned_cols=254  Identities=21%  Similarity=0.281  Sum_probs=198.0

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCc-----eEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEec
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKE-----MVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIR  110 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~-----~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~  110 (379)
                      ..+....|++.+.||+|+||.||+|.+..+++     .||+|++....  .....+.+|+.++..+    ..|+|+++++
T Consensus        41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l----~~h~~iv~~~  116 (333)
T 2i1m_A           41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL----GQHENIVNLL  116 (333)
T ss_dssp             GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHH----CCCTTBCCEE
T ss_pred             ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhh----cCCCCeeeEE
Confidence            44556678999999999999999999877664     79999997432  3345677899998888    2578999999


Q ss_pred             ceeeecceEEEEEeCC-CCCHHHHHHhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEE
Q 017021          111 NWFDYRNHICIVFEKL-GSSLYDFLRKNN------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL  177 (379)
Q Consensus       111 ~~~~~~~~~~lv~e~~-~~sL~~~l~~~~------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nil  177 (379)
                      +++..++..++||||+ +++|.+++....            ...+++..+..++.||+.||.|||+.|++||||||+||+
T Consensus       117 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl  196 (333)
T 2i1m_A          117 GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL  196 (333)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCE
T ss_pred             EEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEE
Confidence            9999999999999999 889999997532            235799999999999999999999999999999999999


Q ss_pred             EecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccch
Q 017021          178 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDI  252 (379)
Q Consensus       178 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDv  252 (379)
                      ++.++.                           ++|+|||.+.......     ....||+.|+|||.+.+..++.++||
T Consensus       197 ~~~~~~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  249 (333)
T 2i1m_A          197 LTNGHV---------------------------AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV  249 (333)
T ss_dssp             EEGGGE---------------------------EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHH
T ss_pred             ECCCCe---------------------------EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHH
Confidence            966554                           4555555554322111     22356788999999998899999999


Q ss_pred             HhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhH
Q 017021          253 WSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ  331 (379)
Q Consensus       253 wSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (379)
                      |||||++|+|++ |..||.+....+....+.......+                     .                    
T Consensus       250 ~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---------------------~--------------------  288 (333)
T 2i1m_A          250 WSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMA---------------------Q--------------------  288 (333)
T ss_dssp             HHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCC---------------------C--------------------
T ss_pred             HHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCC---------------------C--------------------
Confidence            999999999998 9999987554333322222111100                     0                    


Q ss_pred             HHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          332 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       332 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                            ....+..+.++|.+||+.||.+|||++|++++
T Consensus       289 ------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          289 ------PAFAPKNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             ------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------CCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence                  11245689999999999999999999999863

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=5.8e-42  Score=314.99  Aligned_cols=252  Identities=22%  Similarity=0.278  Sum_probs=186.0

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee----cc
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----RN  117 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~----~~  117 (379)
                      ...|++.+.||+|+||.||+|++  +++.||+|++....  ......|.+++....   ..|+|++++++.+..    ..
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~e~~~~~~~~---l~h~niv~~~~~~~~~~~~~~   79 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD--EKSWFRETELYNTVM---LRHENILGFIASDMTSRHSST   79 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHHHHTC---CCCTTBCCEEEEEEEEETTEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc--chhhHHHHHHHHHhh---ccCcCeeeEEEeeccccCCCc
Confidence            45788999999999999999986  68999999997432  344555666665532   278999999988543    45


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH--------HcCCcccCCCCCcEEEecccccccCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH--------DLCMIHTDLKPENVLLVSSEYIKVPD  188 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH--------~~~iiH~dlkp~Nili~~~~~~~~~~  188 (379)
                      ..++||||+ +++|.+++...   .+++..+..++.|++.||+|||        +.|++||||||+||++          
T Consensus        80 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill----------  146 (301)
T 3q4u_A           80 QLWLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV----------  146 (301)
T ss_dssp             EEEEEECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEE----------
T ss_pred             eeEEehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEE----------
Confidence            689999999 88999999654   5999999999999999999999        9999999999999999          


Q ss_pred             CccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-------CcccccCCccchhhhhCC------CCCCccchHhH
Q 017021          189 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGL------GWTYPCDIWSV  255 (379)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~------~~~~~sDvwSl  255 (379)
                                       +.++.++|+|||.+.......       ....||+.|+|||++.+.      .++.++|||||
T Consensus       147 -----------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvwsl  209 (301)
T 3q4u_A          147 -----------------KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAF  209 (301)
T ss_dssp             -----------------CTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHH
T ss_pred             -----------------cCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHH
Confidence                             455667778887775332222       224789999999999876      34578999999


Q ss_pred             HHHHHHHHhC----------CCCCCCCchH-HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhh
Q 017021          256 GCILVELCTG----------EALFQTHENL-EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSV  324 (379)
Q Consensus       256 G~il~~l~~g----------~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (379)
                      ||++|+|++|          ..||...... .....+.+....                 .......+.           
T Consensus       210 G~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~-----------  261 (301)
T 3q4u_A          210 GLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCV-----------------DQQRPNIPN-----------  261 (301)
T ss_dssp             HHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT-----------------SCCCCCCCG-----------
T ss_pred             HHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhc-----------------cCCCCCCCh-----------
Confidence            9999999999          7777542210 000111110000                 000000000           


Q ss_pred             ccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          325 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                                .......+..+.++|.+||+.||++|||++|+++
T Consensus       262 ----------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          262 ----------RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             ----------GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             ----------hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence                      0112235678999999999999999999999985

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=9.3e-42  Score=313.87  Aligned_cols=240  Identities=26%  Similarity=0.478  Sum_probs=185.6

Q ss_pred             hhhhh-hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee----cce
Q 017021           44 ADKIH-SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----RNH  118 (379)
Q Consensus        44 ~y~i~-~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~----~~~  118 (379)
                      .|.+. +.||+|+||.||+|.++.+++.||+|+++..    ....+|+.++.+.    ..|+|++++++++..    ...
T Consensus        18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~----~~h~~i~~~~~~~~~~~~~~~~   89 (299)
T 3m2w_A           18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRA----SQCPHIVRIVDVYENLYAGRKC   89 (299)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHH----TTSTTBCCEEEEEEEEETTEEE
T ss_pred             chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHh----ccCCCchhHHhhhhhhcCCCce
Confidence            35555 7799999999999999999999999999743    3455677777554    267899999999887    778


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .++||||+ +++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||+++..                
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~----------------  153 (299)
T 3m2w_A           90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK----------------  153 (299)
T ss_dssp             EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS----------------
T ss_pred             EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecC----------------
Confidence            99999999 8899999988765579999999999999999999999999999999999999432                


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                              ..+..++|+|||.+....                   +..++.++|||||||++|+|++|..||......+.
T Consensus       154 --------~~~~~~kl~Dfg~a~~~~-------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~  206 (299)
T 3m2w_A          154 --------RPNAILKLTDFGFAKETT-------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI  206 (299)
T ss_dssp             --------STTCCEEECCCTTCEECT-------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------
T ss_pred             --------CCCCcEEEeccccccccc-------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh
Confidence                    225779999999875322                   23467899999999999999999999976443221


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+                   ......+....                      ....+...+.++.++|.+||+.||
T Consensus       207 ~~~~-------------------~~~~~~~~~~~----------------------~~~~~~~~~~~~~~li~~~l~~dP  245 (299)
T 3m2w_A          207 SPGM-------------------KTRIRMGQYEF----------------------PNPEWSEVSEEVKMLIRNLLKTEP  245 (299)
T ss_dssp             -CCS-------------------CCSSCTTCCSS----------------------CHHHHTTSCHHHHHHHHHHTCSST
T ss_pred             hHHH-------------------HHHHhhccccC----------------------CchhcccCCHHHHHHHHHHcccCh
Confidence            1000                   00000000000                      011223567899999999999999


Q ss_pred             CCCcCHHHHhcCCCCCCC
Q 017021          358 TDRLTAREALRHPFFTRD  375 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f~~~  375 (379)
                      .+|||++|+++||||++.
T Consensus       246 ~~Rps~~e~l~hp~~~~~  263 (299)
T 3m2w_A          246 TQRMTITEFMNHPWIMQS  263 (299)
T ss_dssp             TTSCCHHHHHTSHHHHTG
T ss_pred             hhCCCHHHHhcChhhccc
Confidence            999999999999999765

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=3.3e-42  Score=320.89  Aligned_cols=265  Identities=23%  Similarity=0.278  Sum_probs=198.2

Q ss_pred             eechhhhhhhhccccccceeEEEEE----ecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  113 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~----~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~  113 (379)
                      .+....|++.+.||+|+||.||+|+    +..+++.||+|++.... .....+.+|+.++..+     .|+|++.+++++
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~   93 (327)
T 3lxl_A           19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-----HSDFIVKYRGVS   93 (327)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEE
T ss_pred             hhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhc-----CCCceeEEEEEE
Confidence            4567788999999999999999998    57789999999997442 3345577899888887     779999999887


Q ss_pred             e--ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCc
Q 017021          114 D--YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       114 ~--~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                      .  .....++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+.|++||||||+||+++.+         
T Consensus        94 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~---------  163 (327)
T 3lxl_A           94 YGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESE---------  163 (327)
T ss_dssp             ECSSSCEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET---------
T ss_pred             ecCCCceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCC---------
Confidence            6  456799999999 999999997743 258999999999999999999999999999999999999544         


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~  264 (379)
                                        +.++|+|||.+.......      ....||..|+|||.+.+..++.++|||||||++|+|++
T Consensus       164 ------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~  225 (327)
T 3lxl_A          164 ------------------AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT  225 (327)
T ss_dssp             ------------------TEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHT
T ss_pred             ------------------CCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHh
Confidence                              456666776665433222      22357888999999998889999999999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |..||...........  ......+.  .   ...............                          ...+++.
T Consensus       226 g~~p~~~~~~~~~~~~--~~~~~~~~--~---~~~~~~~~~~~~~~~--------------------------~~~~~~~  272 (327)
T 3lxl_A          226 YCDKSCSPSAEFLRMM--GCERDVPA--L---SRLLELLEEGQRLPA--------------------------PPACPAE  272 (327)
T ss_dssp             TTCGGGSHHHHHHHHC--C----CCH--H---HHHHHHHHTTCCCCC--------------------------CTTCCHH
T ss_pred             CCCCCccccchhhhhc--cccccccc--H---HHHHHHhhcccCCCC--------------------------CCcccHH
Confidence            9999875332111100  00000000  0   000011111111111                          1246788


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhcC
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      +.++|.+||+.||.+|||++|++++
T Consensus       273 l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          273 VHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999999643

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=1.8e-41  Score=315.62  Aligned_cols=269  Identities=19%  Similarity=0.201  Sum_probs=198.1

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch--hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      ....-.|++.+.||+|+||.||+|++. +++.||+|++.....  ....+.+|+.++..+     .|+|++++++++...
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~   99 (326)
T 3uim_A           26 QVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMA-----VHRNLLRLRGFCMTP   99 (326)
T ss_dssp             HTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTC-----CCTTBCCCCEEECCS
T ss_pred             HHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhc-----cCCCccceEEEEecC
Confidence            345567899999999999999999854 588999999874321  223566787777666     689999999999999


Q ss_pred             ceEEEEEeCC-CCCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHc---CCcccCCCCCcEEEecccccccCCCc
Q 017021          117 NHICIVFEKL-GSSLYDFLRKNN--YRSFPIDLVREIARQLLECIAFMHDL---CMIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       117 ~~~~lv~e~~-~~sL~~~l~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                      +..++||||+ +++|.+++....  ...+++..+..++.|++.||.|||+.   |++||||||+||++            
T Consensus       100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~------------  167 (326)
T 3uim_A          100 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL------------  167 (326)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE------------
T ss_pred             CceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE------------
Confidence            9999999999 889999998653  22489999999999999999999999   99999999999999            


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCC
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~  266 (379)
                                     +.++.++|+|||.+.......    ....||+.|+|||++.+..++.++|||||||++|+|++|.
T Consensus       168 ---------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  232 (326)
T 3uim_A          168 ---------------DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ  232 (326)
T ss_dssp             ---------------CTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCC
T ss_pred             ---------------CCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCC
Confidence                           555678888888876543322    2245899999999998888999999999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||......          .......    .................            . .   ..........+..+.
T Consensus       233 ~pf~~~~~~----------~~~~~~~----~~~~~~~~~~~~~~~~~------------~-~---~~~~~~~~~~~~~l~  282 (326)
T 3uim_A          233 RAFDLARLA----------NDDDVML----LDWVKGLLKEKKLEALV------------D-V---DLQGNYKDEEVEQLI  282 (326)
T ss_dssp             CSBCHHHHT----------TTSCSBH----HHHHTTTTSSCCSTTSS------------C-T---TCTTSCCHHHHHHHH
T ss_pred             Ccccccccc----------cccchhH----HHHHHHHhhchhhhhhc------------C-h---hhccccCHHHHHHHH
Confidence            999621100          0000000    00000000000000000            0 0   000011223567899


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHP  370 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp  370 (379)
                      +++.+||+.||.+|||++|+++|-
T Consensus       283 ~li~~cl~~dP~~Rps~~ell~~L  306 (326)
T 3uim_A          283 QVALLCTQSSPMERPKMSEVVRML  306 (326)
T ss_dssp             HHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred             HHHHHHhCcCCccCCCHHHHHHHh
Confidence            999999999999999999999874

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=2.2e-41  Score=313.69  Aligned_cols=261  Identities=19%  Similarity=0.253  Sum_probs=200.4

Q ss_pred             cceeeeeeeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeE
Q 017021           29 CNMFNLITYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCV  107 (379)
Q Consensus        29 ~~~~~~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~  107 (379)
                      .+.......+.+....|++.+.||+|+||.||+|++..+++.||+|++... ......+.+|+.++..+     .|+|++
T Consensus        15 ~~~~~~g~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv   89 (317)
T 2buj_A           15 ENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF-----NHPNIL   89 (317)
T ss_dssp             -CCSEEEEEEEETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTC-----CCTTBC
T ss_pred             cceeecccEEEECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhc-----CCCCee
Confidence            344455677778888999999999999999999999999999999998643 33455667788888877     789999


Q ss_pred             Eecceee----ecceEEEEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEec
Q 017021          108 QIRNWFD----YRNHICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  180 (379)
Q Consensus       108 ~~~~~~~----~~~~~~lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~  180 (379)
                      ++++++.    .....++||||+ +++|.+++...  ....+++..+..++.||+.||.|||+.|++||||||+||++  
T Consensus        90 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~--  167 (317)
T 2buj_A           90 RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL--  167 (317)
T ss_dssp             CCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE--
T ss_pred             eEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE--
Confidence            9999886    345789999999 88999999762  22468999999999999999999999999999999999999  


Q ss_pred             ccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC------------CcccccCCccchhhhhCCC---
Q 017021          181 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------------NYIVSTRHYRAPEVILGLG---  245 (379)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------------~~~~gt~~y~aPE~~~~~~---  245 (379)
                                               +.++.++|+|||.+.......            ....||+.|+|||.+.+..   
T Consensus       168 -------------------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  222 (317)
T 2buj_A          168 -------------------------GDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCV  222 (317)
T ss_dssp             -------------------------CTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEE
T ss_pred             -------------------------cCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcC
Confidence                                     455667888888765433211            1234689999999987654   


Q ss_pred             CCCccchHhHHHHHHHHHhCCCCCCCCchH--HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhh
Q 017021          246 WTYPCDIWSVGCILVELCTGEALFQTHENL--EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS  323 (379)
Q Consensus       246 ~~~~sDvwSlG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (379)
                      ++.++|||||||++|+|++|..||......  .....+.                       . ....+           
T Consensus       223 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-----------------------~-~~~~~-----------  267 (317)
T 2buj_A          223 IDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ-----------------------N-QLSIP-----------  267 (317)
T ss_dssp             ECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH-----------------------C-C--CC-----------
T ss_pred             CCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh-----------------------c-cCCCC-----------
Confidence            689999999999999999999999531100  0000000                       0 00000           


Q ss_pred             hccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          324 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                                   .....+..+.++|.+||+.||.+|||+++++++
T Consensus       268 -------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          268 -------------QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             -------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------------ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence                         012356789999999999999999999999975

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=2.5e-41  Score=309.45  Aligned_cols=251  Identities=23%  Similarity=0.319  Sum_probs=186.4

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      ..+..-.|++.++||+|+||.||+|++..   .||+|+++..   ......+.+|+.++..+     .|+|++.++++. 
T Consensus        19 ~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~-   89 (289)
T 3og7_A           19 WEIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-----RHVNILLFMGYS-   89 (289)
T ss_dssp             CBCCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEE-
T ss_pred             CccCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhC-----CCCcEEEEEeec-
Confidence            34566789999999999999999998643   4999998643   23345567788888777     789999999854 


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      .....++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++.             
T Consensus        90 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~-------------  155 (289)
T 3og7_A           90 TAPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHE-------------  155 (289)
T ss_dssp             CSSSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET-------------
T ss_pred             cCCccEEEEEecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECC-------------
Confidence            556789999999 899999996543 36899999999999999999999999999999999999954             


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhh---CCCCCCccchHhHHHHHHHHHhC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTG  265 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~~l~~g  265 (379)
                                    ++.++|+|||.+......     .....||+.|+|||.+.   +..++.++|||||||++|+|++|
T Consensus       156 --------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g  221 (289)
T 3og7_A          156 --------------DNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG  221 (289)
T ss_dssp             --------------TTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHS
T ss_pred             --------------CCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHC
Confidence                          455777777776533221     12346899999999986   55688899999999999999999


Q ss_pred             CCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHH
Q 017021          266 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  345 (379)
Q Consensus       266 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (379)
                      +.||......+............+.                    .                       ......++..+
T Consensus       222 ~~p~~~~~~~~~~~~~~~~~~~~~~--------------------~-----------------------~~~~~~~~~~l  258 (289)
T 3og7_A          222 QLPYSNINNRDQIIEMVGRGSLSPD--------------------L-----------------------SKVRSNCPKRM  258 (289)
T ss_dssp             SCTTSSCCCHHHHHHHHHHTSCCCC--------------------T-----------------------TSSCTTSCHHH
T ss_pred             CCCccccchHHHHHHHhcccccCcc--------------------h-----------------------hhccccCCHHH
Confidence            9999876554433322221111000                    0                       00112456789


Q ss_pred             HHHHhhccccCCCCCcCHHHHhc
Q 017021          346 THLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       346 ~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      .++|.+||+.||.+|||++|+++
T Consensus       259 ~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          259 KRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHccCChhhCCCHHHHHH
Confidence            99999999999999999999985

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=2.1e-42  Score=345.50  Aligned_cols=278  Identities=24%  Similarity=0.302  Sum_probs=204.1

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee-----
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-----  115 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~-----  115 (379)
                      ..|++.++||+|+||.||+|.+..+|+.||+|++...  ......+.+|+.++..+     .|+|++.+++++..     
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-----~HpnIV~l~~v~~~~~~~~   88 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-----NHPNVVSAREVPDGLQKLA   88 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-----CBTTBCCEEECCTTTCCCC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-----CCCCCCceeeeeccccccc
Confidence            4689999999999999999999999999999998642  33455677899999988     68999999888765     


Q ss_pred             -cceEEEEEeCC-CCCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          116 -RNHICIVFEKL-GSSLYDFLRKNN-YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       116 -~~~~~lv~e~~-~~sL~~~l~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                       ++..|+||||+ +++|.+++.... ...+++..+..++.|++.||.|||+.||+||||||+||+++.++          
T Consensus        89 ~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g----------  158 (676)
T 3qa8_A           89 PNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGP----------  158 (676)
T ss_dssp             TTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCS----------
T ss_pred             CCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCC----------
Confidence             67889999999 999999998743 23588999999999999999999999999999999999996432          


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                                    ....++|+|||.+.......  ....||+.|+|||.+.+..++.++|||||||++|+|++|..||.
T Consensus       159 --------------~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~  224 (676)
T 3qa8_A          159 --------------QRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL  224 (676)
T ss_dssp             --------------SSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCC
T ss_pred             --------------CceeEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence                          23458899999887654433  34578999999999998899999999999999999999999997


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      .......      ...........   .........+...+....          ..      ........+..+.++|.
T Consensus       225 ~~~~~~~------~~~~i~~~~~~---~~~~~~~l~g~~~~~~~l----------p~------p~~l~~~ls~~L~dLI~  279 (676)
T 3qa8_A          225 PNWQPVQ------WHGKVREKSNE---HIVVYDDLTGAVKFSSVL----------PT------PNHLSGILAGKLERWLQ  279 (676)
T ss_dssp             SSCHHHH------SSTTCC---------CCSCCCCSSSCCCCSSS----------CC------SCCCCGGGHHHHHHHHH
T ss_pred             cccchhh------hhhhhhcccch---hhhhhhhhcccccccccc----------CC------chhhchhhhHHHHHHHH
Confidence            6433211      00000000000   000000001111111100          00      01122346788999999


Q ss_pred             hccccCCCCCcCHHHHhcCCCCCC
Q 017021          351 GLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      +||+.||++|||++|+++||||++
T Consensus       280 ~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          280 CMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             HHSCSSCC---CCTTCCCCTTHHH
T ss_pred             HHccCCHhhCcCHHHHhcCHHHHH
Confidence            999999999999999999999964

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=2.1e-41  Score=314.29  Aligned_cols=266  Identities=26%  Similarity=0.328  Sum_probs=199.3

Q ss_pred             eeeeeeechhhhhhhhccccccceeEEEEE----ecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeE
Q 017021           34 LITYIVFSAFADKIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCV  107 (379)
Q Consensus        34 ~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~----~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~  107 (379)
                      +.....+....|++.++||+|+||.||++.    +..+++.||+|+++...  .....+.+|+.++..+     .|+|++
T Consensus        22 pg~~~~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv   96 (318)
T 3lxp_A           22 PGDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-----YHEHII   96 (318)
T ss_dssp             --CCCBCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-----CCTTBC
T ss_pred             CCCCceecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhC-----CCcchh
Confidence            344556777777999999999999997764    45678999999997532  3345677899999888     689999


Q ss_pred             Eecceeee--cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccccc
Q 017021          108 QIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI  184 (379)
Q Consensus       108 ~~~~~~~~--~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~  184 (379)
                      ++++++.+  ...+++||||+ +++|.+++....   +++..+..++.||+.||.|||+.|++||||||+||++      
T Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~------  167 (318)
T 3lxp_A           97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL------  167 (318)
T ss_dssp             CEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSC---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE------
T ss_pred             hEEEEEecCCCceEEEEEecccCCcHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE------
Confidence            99999987  46899999999 889999997754   8999999999999999999999999999999999999      


Q ss_pred             ccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHH
Q 017021          185 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCI  258 (379)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~i  258 (379)
                                           +.++.++|+|||.+.......      ....+|..|+|||.+.+..++.++|||||||+
T Consensus       168 ---------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  226 (318)
T 3lxp_A          168 ---------------------DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT  226 (318)
T ss_dssp             ---------------------CTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHH
T ss_pred             ---------------------cCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHH
Confidence                                 455667888888776544332      22357788999999998889999999999999


Q ss_pred             HHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccC-CCCCCCCCCchhhhhhhccchhhHHHHHHh
Q 017021          259 LVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSVMKLPRLQNLIMQH  337 (379)
Q Consensus       259 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (379)
                      +|+|++|..||.......     ....+...... .. .. .......+ ...                          .
T Consensus       227 l~~ll~g~~p~~~~~~~~-----~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~--------------------------~  272 (318)
T 3lxp_A          227 LYELLTHCDSSQSPPTKF-----LELIGIAQGQM-TV-LR-LTELLERGERLP--------------------------R  272 (318)
T ss_dssp             HHHHHTTTCGGGSHHHHH-----HHHHCSCCHHH-HH-HH-HHHHHHTTCCCC--------------------------C
T ss_pred             HHHHHhCCCcccccchhh-----hhhhcccccch-hH-HH-HHHHHhcccCCC--------------------------C
Confidence            999999999997532211     00111111000 00 00 00011110 111                          1


Q ss_pred             hccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       338 ~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      ...++..+.+||.+||+.||.+|||++|+++
T Consensus       273 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          273 PDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            1246788999999999999999999999984

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.2e-41  Score=315.01  Aligned_cols=250  Identities=21%  Similarity=0.271  Sum_probs=184.8

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec----c
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR----N  117 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~----~  117 (379)
                      ...|++.++||+|+||.||+|++.  ++.||+|++....  ......|.+++...   ...|+|++++++++...    .
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~e~~~~~~~---~~~h~~i~~~~~~~~~~~~~~~  108 (337)
T 3mdy_A           36 AKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE--EASWFRETEIYQTV---LMRHENILGFIAADIKGTGSWT  108 (337)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG--HHHHHHHHHHHTST---TCCCTTBCCEEEEEEESCGGGC
T ss_pred             ccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc--cchhhhHHHHHHHH---hhcCCCeeeEEEEEccCCCCCC
Confidence            357899999999999999999875  8999999997443  23334444444332   13789999999998876    7


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc--------CCcccCCCCCcEEEecccccccCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL--------CMIHTDLKPENVLLVSSEYIKVPD  188 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~--------~iiH~dlkp~Nili~~~~~~~~~~  188 (379)
                      ..++||||+ +++|.+++...   .+++..+..++.|++.||+|||+.        |++||||||+||++          
T Consensus       109 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill----------  175 (337)
T 3mdy_A          109 QLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV----------  175 (337)
T ss_dssp             EEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE----------
T ss_pred             ceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE----------
Confidence            899999999 88999999775   499999999999999999999998        99999999999999          


Q ss_pred             CccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-------CcccccCCccchhhhhCCCCCCc------cchHhH
Q 017021          189 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGLGWTYP------CDIWSV  255 (379)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~------sDvwSl  255 (379)
                                       +.++.++|+|||.+.......       ....||+.|+|||++.+...+..      +|||||
T Consensus       176 -----------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diwsl  238 (337)
T 3mdy_A          176 -----------------KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSF  238 (337)
T ss_dssp             -----------------CTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHH
T ss_pred             -----------------CCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHH
Confidence                             455567777887775433222       23478999999999988776655      999999


Q ss_pred             HHHHHHHHhC----------CCCCCCCch----HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhh
Q 017021          256 GCILVELCTG----------EALFQTHEN----LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESI  321 (379)
Q Consensus       256 G~il~~l~~g----------~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (379)
                      ||++|+|++|          ..||.....    ............                    .....+.        
T Consensus       239 G~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~--------  290 (337)
T 3mdy_A          239 GLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKK--------------------LRPSFPN--------  290 (337)
T ss_dssp             HHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC--------------------CCCCCCG--------
T ss_pred             HHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhc--------------------cCccccc--------
Confidence            9999999999          555543211    000000000000                    0000000        


Q ss_pred             hhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          322 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                                   ....+.++..+.++|.+||+.||++|||++|+++|
T Consensus       291 -------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          291 -------------RWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             -------------GGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             -------------cchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence                         00112356789999999999999999999999875

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.7e-41  Score=336.23  Aligned_cols=254  Identities=26%  Similarity=0.336  Sum_probs=204.7

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      .+....|++.++||+|+||.||+|.+.. +..||||+++........+.+|+.++..+     .|+||+++++++.. +.
T Consensus       263 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~-~~  335 (535)
T 2h8h_A          263 EIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEKLVQLYAVVSE-EP  335 (535)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECS-SS
T ss_pred             ecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhC-----CCCCEeeEEEEEee-cc
Confidence            4566788999999999999999999875 45699999986555567788999999998     78999999998876 67


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .|+||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++                  
T Consensus       336 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~------------------  397 (535)
T 2h8h_A          336 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG------------------  397 (535)
T ss_dssp             CEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC------------------
T ss_pred             ceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEc------------------
Confidence            89999999 88999999764334589999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCC----CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH  272 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~  272 (379)
                               .+..+||+|||++......    .....++..|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus       398 ---------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~  468 (535)
T 2h8h_A          398 ---------ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM  468 (535)
T ss_dssp             ---------GGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC
T ss_pred             ---------CCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                     4456777777777644321    122346778999999998899999999999999999999 99999887


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      ...+....+.+....                      ..                          ...++..+.+||.+|
T Consensus       469 ~~~~~~~~i~~~~~~----------------------~~--------------------------~~~~~~~l~~li~~c  500 (535)
T 2h8h_A          469 VNREVLDQVERGYRM----------------------PC--------------------------PPECPESLHDLMCQC  500 (535)
T ss_dssp             CHHHHHHHHHTTCCC----------------------CC--------------------------CTTCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCC----------------------CC--------------------------CCCCCHHHHHHHHHH
Confidence            665554443322110                      00                          123567899999999


Q ss_pred             cccCCCCCcCHHHHhcC--CCCCC
Q 017021          353 LRYDPTDRLTAREALRH--PFFTR  374 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~h--p~f~~  374 (379)
                      |+.||++|||++++++.  .+|..
T Consensus       501 l~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          501 WRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             TCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             cCCChhHCcCHHHHHHHHHHHhhc
Confidence            99999999999999864  45543

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=4.4e-41  Score=310.26  Aligned_cols=257  Identities=24%  Similarity=0.336  Sum_probs=194.4

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc-----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      .|...++||+|+||.||+|.+  +++.||+|++...     ......+.+|+.++..+     .|+|++++++++...+.
T Consensus        32 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~  104 (307)
T 2nru_A           32 ISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-----QHENLVELLGFSSDGDD  104 (307)
T ss_dssp             TTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSSS
T ss_pred             ccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-----CCCCeEEEEEEEecCCc
Confidence            455668999999999999985  5789999998642     23345677899998888     68999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKN-NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      .++||||+ +++|.+++... ....+++..+..++.|++.||.|||+.|++||||||+||++                  
T Consensus       105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili------------------  166 (307)
T 2nru_A          105 LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL------------------  166 (307)
T ss_dssp             CEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE------------------
T ss_pred             eEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE------------------
Confidence            99999999 99999999753 22358999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                               +.++.++|+|||.+.......     ....||+.|+|||.+.+ .++.++||||||+++|+|++|..||..
T Consensus       167 ---------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~  236 (307)
T 2nru_A          167 ---------DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDE  236 (307)
T ss_dssp             ---------CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCT
T ss_pred             ---------cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCccc
Confidence                     455667788888775433321     23468999999999876 478999999999999999999999986


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .........+.+........        ...+.....                          .......+..+.+++.+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~--------------------------~~~~~~~~~~l~~li~~  282 (307)
T 2nru_A          237 HREPQLLLDIKEEIEDEEKT--------IEDYIDKKM--------------------------NDADSTSVEAMYSVASQ  282 (307)
T ss_dssp             TBSSSBTTHHHHHHHTTSCC--------HHHHSCSSC--------------------------SCCCHHHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHhhhhhhh--------hhhhccccc--------------------------cccchHHHHHHHHHHHH
Confidence            54322221111111000000        000000000                          00112345679999999


Q ss_pred             ccccCCCCCcCHHHHhcC
Q 017021          352 LLRYDPTDRLTAREALRH  369 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~h  369 (379)
                      ||+.||.+|||+++++++
T Consensus       283 cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          283 CLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HTCSSTTTSCCHHHHHHH
T ss_pred             HcCCCcccCcCHHHHHHH
Confidence            999999999999999864

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-41  Score=321.73  Aligned_cols=249  Identities=17%  Similarity=0.197  Sum_probs=187.1

Q ss_pred             echhhhhhhhccccccceeEEEEEecCC---CceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEeccee-
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRER---KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF-  113 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~-  113 (379)
                      .....|++.+.||+|+||.||+|.+..+   +..||+|.++..  ......+.+|+.++.++     .|+|++++++++ 
T Consensus        86 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~~~~~~~  160 (373)
T 3c1x_A           86 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-----SHPNVLSLLGICL  160 (373)
T ss_dssp             STTEEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTC-----CCTTBCCCCEEEC
T ss_pred             hhhceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEE
Confidence            3445678889999999999999987543   346899998642  23345667788877776     789999999975 


Q ss_pred             eecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          114 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       114 ~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                      ..++..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||++              
T Consensus       161 ~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll--------------  225 (373)
T 3c1x_A          161 RSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML--------------  225 (373)
T ss_dssp             CCSSCCEEEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE--------------
T ss_pred             cCCCCeEEEEECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEE--------------
Confidence            4567889999999 889999997654 358899999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC-------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-  264 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-  264 (379)
                                   +.++.++|+|||.+.......       ....+|+.|+|||.+.+..++.++|||||||++|+|++ 
T Consensus       226 -------------~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~  292 (373)
T 3c1x_A          226 -------------DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR  292 (373)
T ss_dssp             -------------CTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             -------------CCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhC
Confidence                         445567777777765432221       22356788999999999899999999999999999999 


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |.+||...+..+....+.+....                      ..                          ...++..
T Consensus       293 ~~~p~~~~~~~~~~~~~~~~~~~----------------------~~--------------------------p~~~~~~  324 (373)
T 3c1x_A          293 GAPPYPDVNTFDITVYLLQGRRL----------------------LQ--------------------------PEYCPDP  324 (373)
T ss_dssp             SCCSCTTSCSSCHHHHHHTTCCC----------------------CC--------------------------CTTCCHH
T ss_pred             cCCCCCCCCHHHHHHHHHcCCCC----------------------CC--------------------------CCCCCHH
Confidence            78888765543333222211100                      00                          1135678


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhcC
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      +.++|.+||+.||++|||++|++++
T Consensus       325 l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          325 LYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999999864

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=6.4e-42  Score=319.84  Aligned_cols=275  Identities=20%  Similarity=0.211  Sum_probs=186.2

Q ss_pred             eechhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee----
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD----  114 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~----  114 (379)
                      .+....|++.+.||+|+||.||+|++  +++.||+|++.....  .....|.++...   ....|+|++++++.+.    
T Consensus         9 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~e~~~~~~---~~~~h~~i~~~~~~~~~~~~   81 (336)
T 3g2f_A            9 SLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR--QNFINEKNIYRV---PLMEHDNIARFIVGDERVTA   81 (336)
T ss_dssp             CCCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH--HHHHHHHHHHTS---TTCCCTTBCCEEEEEEEECT
T ss_pred             CcChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccch--hhHHHHHHHHHH---HhccCcchhhheeccccccc
Confidence            45566789999999999999999975  689999999974432  233333333221   1237899999987443    


Q ss_pred             -ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc---------CCcccCCCCCcEEEecccc
Q 017021          115 -YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL---------CMIHTDLKPENVLLVSSEY  183 (379)
Q Consensus       115 -~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---------~iiH~dlkp~Nili~~~~~  183 (379)
                       .....++||||+ +++|.+++....   .++..+..++.||+.||.|||+.         ||+||||||+||+++    
T Consensus        82 ~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~----  154 (336)
T 3g2f_A           82 DGRMEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVK----  154 (336)
T ss_dssp             TSCEEEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEEC----
T ss_pred             CCCceEEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEc----
Confidence             334689999999 899999998764   68899999999999999999999         999999999999994    


Q ss_pred             cccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC-----------CCcccccCCccchhhhhC-------CC
Q 017021          184 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----------QNYIVSTRHYRAPEVILG-------LG  245 (379)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~~-------~~  245 (379)
                                             .++.++|+|||.+......           .....||+.|+|||++.+       ..
T Consensus       155 -----------------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  211 (336)
T 3g2f_A          155 -----------------------NDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXES  211 (336)
T ss_dssp             -----------------------TTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHH
T ss_pred             -----------------------CCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccc
Confidence                                   4456777777776543221           123468999999999976       34


Q ss_pred             CCCccchHhHHHHHHHHHhCCCCCCCCch-HHHHHHHHHHcCCCChh-HHHhhhhhhhhhhccCCCCCCCCCCchhhhhh
Q 017021          246 WTYPCDIWSVGCILVELCTGEALFQTHEN-LEHLAMMERVLGPLPQH-MLKRVDRHAEKYVRRGRLDWPEGAASRESIKS  323 (379)
Q Consensus       246 ~~~~sDvwSlG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (379)
                      ++.++|||||||++|+|++|..||..... .+.........+..|.. ....   ...  .......+++...       
T Consensus       212 ~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~-------  279 (336)
T 3g2f_A          212 ALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQV---LVS--REKQRPKFPEAWK-------  279 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHH---HHT--TSCCCCCCCTTCC-------
T ss_pred             cccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHh---hhc--ccccCCCCCcccc-------
Confidence            66789999999999999999766643221 11111111111111111 0000   000  0001111111100       


Q ss_pred             hccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHH------hcCCCCCCC
Q 017021          324 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA------LRHPFFTRD  375 (379)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~------l~hp~f~~~  375 (379)
                                   .....+..+.+||.+||+.||++|||++|+      +.++|-+++
T Consensus       280 -------------~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~  324 (336)
T 3g2f_A          280 -------------ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNK  324 (336)
T ss_dssp             -------------CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC--
T ss_pred             -------------cccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcc
Confidence                         011245679999999999999999999999      556776654

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=3.9e-41  Score=308.02  Aligned_cols=251  Identities=21%  Similarity=0.261  Sum_probs=190.7

Q ss_pred             eeechhhhhhhhccccccceeEEEEEecC-CC--ceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEec
Q 017021           38 IVFSAFADKIHSKMGEGTFGQVLECWDRE-RK--EMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIR  110 (379)
Q Consensus        38 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~-~~--~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~  110 (379)
                      ..+....|++.+.||+|+||.||+|.+.. ++  ..||+|+++..    ......+.+|+.++..+     .|+|+++++
T Consensus        13 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~   87 (291)
T 1u46_A           13 CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-----DHRNLIRLY   87 (291)
T ss_dssp             EECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-----CCTTBCCEE
T ss_pred             cccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-----CCCCcccEE
Confidence            34566789999999999999999998643 33  36999998742    23445677888888887     689999999


Q ss_pred             ceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCC
Q 017021          111 NWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       111 ~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                      +++..+. .++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++.+        
T Consensus        88 ~~~~~~~-~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~--------  157 (291)
T 1u46_A           88 GVVLTPP-MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR--------  157 (291)
T ss_dssp             EEECSSS-CEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET--------
T ss_pred             EEEccCC-ceeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCC--------
Confidence            9998765 88999999 899999997643 258999999999999999999999999999999999999544        


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHH
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC  263 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~  263 (379)
                                         +.++|+|||.+.......      ....+|..|+|||.+.+..++.++||||||+++|+|+
T Consensus       158 -------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  218 (291)
T 1u46_A          158 -------------------DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF  218 (291)
T ss_dssp             -------------------TEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH
T ss_pred             -------------------CCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHH
Confidence                               456667777665433322      1235677899999999888899999999999999999


Q ss_pred             h-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccch
Q 017021          264 T-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  342 (379)
Q Consensus       264 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (379)
                      + |..||...+..+....+.......+                                               .....+
T Consensus       219 ~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~  251 (291)
T 1u46_A          219 TYGQEPWIGLNGSQILHKIDKEGERLP-----------------------------------------------RPEDCP  251 (291)
T ss_dssp             TTSCCTTTTCCHHHHHHHHHTSCCCCC-----------------------------------------------CCTTCC
T ss_pred             hCCCCCcccCCHHHHHHHHHccCCCCC-----------------------------------------------CCcCcC
Confidence            9 9999988766554443322111111                                               012356


Q ss_pred             hHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          343 GDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       343 ~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      ..+.++|.+||+.||++|||+++++++
T Consensus       252 ~~l~~li~~~l~~~p~~Rps~~~l~~~  278 (291)
T 1u46_A          252 QDIYNVMVQCWAHKPEDRPTFVALRDF  278 (291)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            789999999999999999999999863

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=2.3e-42  Score=332.07  Aligned_cols=253  Identities=17%  Similarity=0.184  Sum_probs=186.4

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCC-----------CCCe
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDK-----------GGNR  105 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~-----------~~~~  105 (379)
                      ....|++.+.||+|+||.||+|++..+|+.||||++....    .....+.+|..++..+.+...           ....
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence            3445778899999999999999999999999999987322    223455667776665533110           0001


Q ss_pred             eEEe------cceeee-----cceEEEEEeCCCCCHHHHHHh-----CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCccc
Q 017021          106 CVQI------RNWFDY-----RNHICIVFEKLGSSLYDFLRK-----NNYRSFPIDLVREIARQLLECIAFMHDLCMIHT  169 (379)
Q Consensus       106 i~~~------~~~~~~-----~~~~~lv~e~~~~sL~~~l~~-----~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~  169 (379)
                      ++.+      ...+..     ....+++|++++++|.+++..     .....+++..+..++.||+.||+|||+.||+||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr  235 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT  235 (413)
T ss_dssp             EEECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             hcccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence            1111      111111     234788999999999999852     222357788999999999999999999999999


Q ss_pred             CCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhh--------
Q 017021          170 DLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVI--------  241 (379)
Q Consensus       170 dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~--------  241 (379)
                      ||||+|||+                           +.++.+||+|||++...........| +.|+|||++        
T Consensus       236 DiKp~NILl---------------------------~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~  287 (413)
T 3dzo_A          236 YLRPVDIVL---------------------------DQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFG  287 (413)
T ss_dssp             CCCGGGEEE---------------------------CTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTG
T ss_pred             CcccceEEE---------------------------ecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccc
Confidence            999999999                           55566888888888765555455677 999999999        


Q ss_pred             --hCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchh
Q 017021          242 --LGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRE  319 (379)
Q Consensus       242 --~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (379)
                        .+..++.++|||||||++|+|++|+.||...+..+...                      ..                
T Consensus       288 ~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~----------------------~~----------------  329 (413)
T 3dzo_A          288 QHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSE----------------------WI----------------  329 (413)
T ss_dssp             GGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSG----------------------GG----------------
T ss_pred             cccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHH----------------------HH----------------
Confidence              44457889999999999999999999997644311000                      00                


Q ss_pred             hhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          320 SIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                                     .......+..+.+||.+||+.||++|||+.|+++||||++
T Consensus       330 ---------------~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~  369 (413)
T 3dzo_A          330 ---------------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  369 (413)
T ss_dssp             ---------------GSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             ---------------HhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence                           0001135678999999999999999999999999999964

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=1.8e-41  Score=320.78  Aligned_cols=217  Identities=21%  Similarity=0.265  Sum_probs=172.9

Q ss_pred             eeeeeechhhhhhhhccccccceeEEEE-----EecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEe
Q 017021           35 ITYIVFSAFADKIHSKMGEGTFGQVLEC-----WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI  109 (379)
Q Consensus        35 ~~~~~~~~~~y~i~~~Lg~G~~g~V~~~-----~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~  109 (379)
                      ..-+.+....|++.++||+|+||.||+|     .+..+++.||+|+++..  ....+..|..++..+..  ..|++++.+
T Consensus        57 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~--~~~~~iv~~  132 (365)
T 3e7e_A           57 KTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKP--SMQHMFMKF  132 (365)
T ss_dssp             SCEEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCG--GGGGGBCCE
T ss_pred             ceeEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhh--hhhhhhhhh
Confidence            3445667788999999999999999999     46778999999999744  34456778888887742  247899999


Q ss_pred             cceeeecceEEEEEeCC-CCCHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccc
Q 017021          110 RNWFDYRNHICIVFEKL-GSSLYDFLRKN---NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK  185 (379)
Q Consensus       110 ~~~~~~~~~~~lv~e~~-~~sL~~~l~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~  185 (379)
                      ++.+...+..|+||||+ +++|.+++...   ....+++..+..++.||+.||+|||++||+||||||+|||++......
T Consensus       133 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~  212 (365)
T 3e7e_A          133 YSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQ  212 (365)
T ss_dssp             EEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC
T ss_pred             heeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCc
Confidence            99999999999999999 89999999752   234699999999999999999999999999999999999995421000


Q ss_pred             cCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCC-----CCCcccccCCccchhhhhCCCCCCccchHhHHHHHH
Q 017021          186 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-----DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILV  260 (379)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~  260 (379)
                                  .    ......+.++|+|||.+.....     ......||+.|+|||++.+..++.++|||||||++|
T Consensus       213 ------------~----~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  276 (365)
T 3e7e_A          213 ------------D----DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVY  276 (365)
T ss_dssp             ----------------------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHH
T ss_pred             ------------c----ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHH
Confidence                        0    0013367899999999854321     113457999999999999999999999999999999


Q ss_pred             HHHhCCCCCCC
Q 017021          261 ELCTGEALFQT  271 (379)
Q Consensus       261 ~l~~g~~pf~~  271 (379)
                      +|++|+.||..
T Consensus       277 elltg~~pf~~  287 (365)
T 3e7e_A          277 CMLFGTYMKVK  287 (365)
T ss_dssp             HHHHSSCCCEE
T ss_pred             HHHhCCCcccc
Confidence            99999999964

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.9e-40  Score=307.60  Aligned_cols=274  Identities=23%  Similarity=0.298  Sum_probs=197.1

Q ss_pred             cceeeeeeeeeechhhhhhhhccccccceeEEEEE----ecCCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCC
Q 017021           29 CNMFNLITYIVFSAFADKIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGG  103 (379)
Q Consensus        29 ~~~~~~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~----~~~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~  103 (379)
                      ...+.......+....|++.+.||+|+||.||+|+    +..+++.||+|++... ......+.+|+.++..+     .|
T Consensus        27 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h  101 (326)
T 2w1i_A           27 GSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-----QH  101 (326)
T ss_dssp             ----------CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTC-----CC
T ss_pred             HHHhcccCccccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhC-----CC
Confidence            33444445566778889999999999999999998    5678999999999743 23345677888888887     67


Q ss_pred             CeeEEecceeeec--ceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEec
Q 017021          104 NRCVQIRNWFDYR--NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  180 (379)
Q Consensus       104 ~~i~~~~~~~~~~--~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~  180 (379)
                      +|++++++++...  ...++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++.
T Consensus       102 ~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~  180 (326)
T 2w1i_A          102 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN  180 (326)
T ss_dssp             TTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE
T ss_pred             CCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcC
Confidence            9999999987654  3789999999 889999998764 35899999999999999999999999999999999999954


Q ss_pred             ccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHh
Q 017021          181 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWS  254 (379)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwS  254 (379)
                      +                           +.++|+|||.+.......      ....++..|+|||.+.+..++.++||||
T Consensus       181 ~---------------------------~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  233 (326)
T 2w1i_A          181 E---------------------------NRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWS  233 (326)
T ss_dssp             T---------------------------TEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHH
T ss_pred             C---------------------------CcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHH
Confidence            4                           456666666665433322      1234677899999999888999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCCh-hHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHH
Q 017021          255 VGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQ-HMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL  333 (379)
Q Consensus       255 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (379)
                      |||++|+|++|..|+..... +    ..+..+..+. ....  ....+........+.                      
T Consensus       234 lG~il~el~tg~~~~~~~~~-~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----------------------  284 (326)
T 2w1i_A          234 FGVVLYELFTYIEKSKSPPA-E----FMRMIGNDKQGQMIV--FHLIELLKNNGRLPR----------------------  284 (326)
T ss_dssp             HHHHHHHHHHTTCGGGSHHH-H----HHHHHCTTCCTHHHH--HHHHHHHHTTCCCCC----------------------
T ss_pred             HHHHHHHHHhcCCCCCCCHH-H----HHHhhccccchhhhH--HHHHHHhhcCCCCCC----------------------
Confidence            99999999999998864211 1    1111111111 1100  000000111111111                      


Q ss_pred             HHHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          334 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       334 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                          ...++..+.++|.+||+.||++|||+.|+++
T Consensus       285 ----~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          285 ----PDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             ----CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ----CCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                1246678999999999999999999999985

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1.9e-40  Score=334.31  Aligned_cols=237  Identities=23%  Similarity=0.325  Sum_probs=190.3

Q ss_pred             hccccccceeEEEEEe--cCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEE
Q 017021           49 SKMGEGTFGQVLECWD--RERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  123 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~--~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~  123 (379)
                      ++||+|+||.||+|.+  +.+++.||+|+++...   .....+.+|+.++..+     .|+||++++++++. +..++||
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~l~~~~~~-~~~~lv~  448 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-----DNPYIVRMIGICEA-ESWMLVM  448 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC-----CCTTBCCEEEEEES-SSEEEEE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEec-CCEEEEE
Confidence            3799999999999954  4667899999997432   2346778899999998     78999999999865 4588999


Q ss_pred             eCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          124 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       124 e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      ||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||+++.                      
T Consensus       449 E~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~----------------------  504 (635)
T 4fl3_A          449 EMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT----------------------  504 (635)
T ss_dssp             ECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE----------------------
T ss_pred             EccCCCCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeC----------------------
Confidence            999 899999998754  6899999999999999999999999999999999999954                      


Q ss_pred             ccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchH
Q 017021          203 KRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  275 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~  275 (379)
                           ++.+||+|||++.......      ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..
T Consensus       505 -----~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~  579 (635)
T 4fl3_A          505 -----QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS  579 (635)
T ss_dssp             -----TTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             -----CCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence                 4456777777765433221      12246788999999999899999999999999999998 99999987776


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.+.....                      .                          ...++.++.+||.+||+.
T Consensus       580 ~~~~~i~~~~~~~----------------------~--------------------------p~~~~~~l~~li~~cl~~  611 (635)
T 4fl3_A          580 EVTAMLEKGERMG----------------------C--------------------------PAGCPREMYDLMNLCWTY  611 (635)
T ss_dssp             HHHHHHHTTCCCC----------------------C--------------------------CTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHHcCCCCC----------------------C--------------------------CCCCCHHHHHHHHHHcCC
Confidence            6555443321110                      0                          123567899999999999


Q ss_pred             CCCCCcCHHHHhc
Q 017021          356 DPTDRLTAREALR  368 (379)
Q Consensus       356 dP~~Rpta~e~l~  368 (379)
                      ||++|||++++++
T Consensus       612 dP~~RPs~~~l~~  624 (635)
T 4fl3_A          612 DVENRPGFAAVEL  624 (635)
T ss_dssp             STTTSCCHHHHHH
T ss_pred             CHhHCcCHHHHHH
Confidence            9999999999974

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.9e-40  Score=331.14  Aligned_cols=244  Identities=24%  Similarity=0.316  Sum_probs=191.0

Q ss_pred             hhhhhhh-ccccccceeEEEEEec--CCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           43 FADKIHS-KMGEGTFGQVLECWDR--ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        43 ~~y~i~~-~Lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      ..+.+.+ +||+|+||.||+|.++  .++..||||+++..  ......+.+|+.++..+     .|+||+++++++.. +
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-----~hpniv~l~~~~~~-~  408 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-----DNPYIVRLIGVCQA-E  408 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTC-----CCTTBCCEEEEEES-S
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhC-----CCCCEeeEEEEecc-C
Confidence            3344445 7999999999999876  45677999999753  23456778899988887     78999999999876 5


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..++||||+ +++|.+++.... ..+++..+..++.||+.||+|||+.||+||||||+||+++.++              
T Consensus       409 ~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~--------------  473 (613)
T 2ozo_A          409 ALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRH--------------  473 (613)
T ss_dssp             SEEEEEECCTTCBHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT--------------
T ss_pred             CeEEEEEeCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCC--------------
Confidence            699999999 899999997653 3689999999999999999999999999999999999995544              


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCC
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALF  269 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf  269 (379)
                                   .+||+|||++.......      ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||
T Consensus       474 -------------~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf  540 (613)
T 2ozo_A          474 -------------YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY  540 (613)
T ss_dssp             -------------EEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             -------------cEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence                         56666666665432221      11235678999999998899999999999999999998 99999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  349 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  349 (379)
                      .+.+..+....+.+...                      +..                          ...++.++.++|
T Consensus       541 ~~~~~~~~~~~i~~~~~----------------------~~~--------------------------p~~~~~~l~~li  572 (613)
T 2ozo_A          541 KKMKGPEVMAFIEQGKR----------------------MEC--------------------------PPECPPELYALM  572 (613)
T ss_dssp             TTCCSHHHHHHHHTTCC----------------------CCC--------------------------CTTCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHcCCC----------------------CCC--------------------------CCcCCHHHHHHH
Confidence            88776655544333211                      011                          123667899999


Q ss_pred             hhccccCCCCCcCHHHHhc
Q 017021          350 QGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       350 ~~~L~~dP~~Rpta~e~l~  368 (379)
                      .+||+.||++|||++++++
T Consensus       573 ~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          573 SDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             HHTTCSSTTTSCCHHHHHH
T ss_pred             HHHcCCChhHCcCHHHHHH
Confidence            9999999999999999863

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=1.6e-41  Score=317.54  Aligned_cols=271  Identities=19%  Similarity=0.203  Sum_probs=190.5

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---------hhhHhHHHHHHHHHHHHhcCC----C-----
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---------KYREAAMIEIEVLQQLAKHDK----G-----  102 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---------~~~~~~~~e~~~l~~l~~~~~----~-----  102 (379)
                      ....|++.++||+|+||.||+|++  +|+.||+|++....         .....+.+|+.++..+.....    .     
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv   95 (336)
T 2vuw_A           18 PTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI   95 (336)
T ss_dssp             CHHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred             ccccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence            456799999999999999999987  68999999997432         122667889999998863211    1     


Q ss_pred             ------------CCeeEEecceeee-------------cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 017021          103 ------------GNRCVQIRNWFDY-------------RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE  156 (379)
Q Consensus       103 ------------~~~i~~~~~~~~~-------------~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~  156 (379)
                                  |+||+++++++.+             .+..|+||||+ ++++.+.+..   ..+++..+..++.||+.
T Consensus        96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~  172 (336)
T 2vuw_A           96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTA  172 (336)
T ss_dssp             CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHH
T ss_pred             hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHH
Confidence                        5666666666665             78999999999 7766555543   25899999999999999


Q ss_pred             HHHHHH-HcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCc
Q 017021          157 CIAFMH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHY  235 (379)
Q Consensus       157 aL~~LH-~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y  235 (379)
                      ||+||| +.||+||||||+|||++.++... .++++.      ............+||+|||+|+....  ....||+.|
T Consensus       173 aL~~lH~~~~ivHrDlKp~NILl~~~~~~~-~~~~~~------~~~~~~~~~~~~vkL~DFG~a~~~~~--~~~~gt~~y  243 (336)
T 2vuw_A          173 SLAVAEASLRFEHRDLHWGNVLLKKTSLKK-LHYTLN------GKSSTIPSCGLQVSIIDYTLSRLERD--GIVVFCDVS  243 (336)
T ss_dssp             HHHHHHHHHCCBCSCCCGGGEEEEECSCSE-EEEEET------TEEEEEECTTEEEEECCCTTCBEEET--TEEECCCCT
T ss_pred             HHHHHHHhCCEeECCCCHHHEEEeccCCcc-eeeecc------CccccccCCCceEEEeeccccEecCC--CcEEEeecc
Confidence            999999 99999999999999997654110 000000      00000001234799999999976543  345899999


Q ss_pred             cchhhhhCCCCCCccchHhHHHH-HHHHHhCCCCCCCCch-HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCC
Q 017021          236 RAPEVILGLGWTYPCDIWSVGCI-LVELCTGEALFQTHEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  313 (379)
Q Consensus       236 ~aPE~~~~~~~~~~sDvwSlG~i-l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (379)
                      +|||++.+.. +.++||||||++ .+++++|..||..... ......+.+......                      ..
T Consensus       244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------~~  300 (336)
T 2vuw_A          244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKT----------------------KC  300 (336)
T ss_dssp             TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSS----------------------CC
T ss_pred             cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCc----------------------cc
Confidence            9999998766 899999998777 6778889888842110 001111111000000                      00


Q ss_pred             CCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHh-cCCCCC
Q 017021          314 GAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL-RHPFFT  373 (379)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l-~hp~f~  373 (379)
                                          ....+...++++.+||++||++|     ||+|+| +||||+
T Consensus       301 --------------------~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          301 --------------------NTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             --------------------CSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             --------------------chhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence                                00112346789999999999987     999999 999995

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=2e-40  Score=307.36  Aligned_cols=249  Identities=20%  Similarity=0.251  Sum_probs=193.7

Q ss_pred             eeeeechhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           36 TYIVFSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        36 ~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      +...+....|++.+.||+|+||.||+|.+..   .||+|+++..   ......+.+|+.++.++     .|+|+++++++
T Consensus        26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~   97 (319)
T 2y4i_B           26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQT-----RHENVVLFMGA   97 (319)
T ss_dssp             GGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTC-----CCTTBCCCCEE
T ss_pred             ccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcC-----CCCCEeEEEEE
Confidence            3345566778999999999999999998754   4999998632   22234455677777776     78999999999


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                      +...+..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||+.|++||||||+||+++            
T Consensus        98 ~~~~~~~~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~------------  164 (319)
T 2y4i_B           98 CMSPPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD------------  164 (319)
T ss_dssp             EECSSCEEEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC------------
T ss_pred             EecCCceEEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe------------
Confidence            99999999999999 899999997643 3589999999999999999999999999999999999994            


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCC--------CCCcccccCCccchhhhhC---------CCCCCccchHh
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP--------DQNYIVSTRHYRAPEVILG---------LGWTYPCDIWS  254 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~--------~~~~~~gt~~y~aPE~~~~---------~~~~~~sDvwS  254 (379)
                                      ++.++|+|||.+.....        ......||+.|+|||++.+         ..++.++||||
T Consensus       165 ----------------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~s  228 (319)
T 2y4i_B          165 ----------------NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFA  228 (319)
T ss_dssp             ------------------CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHH
T ss_pred             ----------------CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHH
Confidence                            23567777776543221        1123458999999999864         34788999999


Q ss_pred             HHHHHHHHHhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHH
Q 017021          255 VGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI  334 (379)
Q Consensus       255 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (379)
                      |||++|+|++|..||......+....+.....+...                                            
T Consensus       229 lG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------  264 (319)
T 2y4i_B          229 LGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLS--------------------------------------------  264 (319)
T ss_dssp             HHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCC--------------------------------------------
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCC--------------------------------------------
Confidence            999999999999999876665544433222111100                                            


Q ss_pred             HHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       335 ~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                         ....+.++.++|.+||+.||.+|||++++++
T Consensus       265 ---~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          265 ---QIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             ---CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             ---cCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence               0135678999999999999999999999985

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=3.9e-40  Score=308.37  Aligned_cols=251  Identities=21%  Similarity=0.272  Sum_probs=188.3

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc----e
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN----H  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~----~  118 (379)
                      ..|++.+.||+|+||.||+|++  +++.||+|++...  ....+..|.+++....   ..|+|++++++++....    .
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~e~~~~~~~~---l~h~ni~~~~~~~~~~~~~~~~  114 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR--EERSWFREAEIYQTVM---LRHENILGFIAADNKDNGTWTQ  114 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG--GHHHHHHHHHHHHHSC---CCCTTBCCEEEEEECCCSSCCC
T ss_pred             ccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch--hHHHHHHHHHHHHHhh---cCCCcEEEEEeeecccCCccce
Confidence            5789999999999999999987  5899999999743  2445666777776632   27899999999998775    8


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH--------HcCCcccCCCCCcEEEecccccccCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH--------DLCMIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH--------~~~iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                      .++||||+ +++|.+++...   .+++..+..++.|++.||.|||        +.|++||||||+||++           
T Consensus       115 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll-----------  180 (342)
T 1b6c_B          115 LWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV-----------  180 (342)
T ss_dssp             EEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE-----------
T ss_pred             eEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE-----------
Confidence            99999999 88999999875   4899999999999999999999        8999999999999999           


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-------CcccccCCccchhhhhCCC------CCCccchHhHH
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGLG------WTYPCDIWSVG  256 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~------~~~~sDvwSlG  256 (379)
                                      +.++.++|+|||.+.......       ....||+.|+|||++.+..      ++.++||||||
T Consensus       181 ----------------~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG  244 (342)
T 1b6c_B          181 ----------------KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG  244 (342)
T ss_dssp             ----------------CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHH
T ss_pred             ----------------CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHH
Confidence                            455667888888775433322       3346899999999997753      33689999999


Q ss_pred             HHHHHHHhC----------CCCCCCCchHH-HHHHHHHHcCCCChhHHHhhhhhhhhhhccC-CCCCCCCCCchhhhhhh
Q 017021          257 CILVELCTG----------EALFQTHENLE-HLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSV  324 (379)
Q Consensus       257 ~il~~l~~g----------~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  324 (379)
                      |++|+|++|          ..||....... ....+.+..                  .... ....+..          
T Consensus       245 ~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~----------  296 (342)
T 1b6c_B          245 LVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV------------------CEQKLRPNIPNR----------  296 (342)
T ss_dssp             HHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH------------------TTSCCCCCCCGG----------
T ss_pred             HHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHH------------------HHHHhCCCCccc----------
Confidence            999999999          67775432100 000000000                  0000 0000000          


Q ss_pred             ccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          325 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                                 ......+..+.++|.+||+.||++|||+.|+++|
T Consensus       297 -----------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          297 -----------WQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             -----------GGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             -----------ccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence                       0012345679999999999999999999999875

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=2.5e-39  Score=327.32  Aligned_cols=247  Identities=23%  Similarity=0.283  Sum_probs=195.8

Q ss_pred             echhhhhhhhccccccceeEEEEEecCC---CceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRER---KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      +....|++.+.||+|+||.||+|.+..+   +..||+|+++..  ......+.+|+.++..+     .|+||+++++++.
T Consensus       387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~l~~~~~  461 (656)
T 2j0j_A          387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-----DHPHIVKLIGVIT  461 (656)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEC
T ss_pred             cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEe
Confidence            4456788999999999999999998654   467999998642  23346677899988888     7899999999885


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                       ++..|+||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.||+||||||+||+++.+            
T Consensus       462 -~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~------------  527 (656)
T 2j0j_A          462 -ENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN------------  527 (656)
T ss_dssp             -SSSCEEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET------------
T ss_pred             -cCceEEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCC------------
Confidence             45689999999 899999998654 358999999999999999999999999999999999999544            


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL  268 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~p  268 (379)
                                     +.++|+|||.+.......    ....+|+.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus       528 ---------------~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~P  592 (656)
T 2j0j_A          528 ---------------DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP  592 (656)
T ss_dssp             ---------------TEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ---------------CCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCC
Confidence                           456666666665433222    12346778999999998899999999999999999997 9999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |.+.+..+....+......                      +.                          ...+++.+.++
T Consensus       593 f~~~~~~~~~~~i~~~~~~----------------------~~--------------------------~~~~~~~l~~l  624 (656)
T 2j0j_A          593 FQGVKNNDVIGRIENGERL----------------------PM--------------------------PPNCPPTLYSL  624 (656)
T ss_dssp             TTTCCHHHHHHHHHHTCCC----------------------CC--------------------------CTTCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCC----------------------CC--------------------------CccccHHHHHH
Confidence            9887766555444332111                      01                          12356789999


Q ss_pred             HhhccccCCCCCcCHHHHhc
Q 017021          349 LQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~  368 (379)
                      |.+||+.||++|||+.|+++
T Consensus       625 i~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          625 MTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999985

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=1.3e-38  Score=291.07  Aligned_cols=222  Identities=14%  Similarity=0.006  Sum_probs=173.0

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch----hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      -.|++.+.||+|+||.||+|++..+++.||+|++.....    ....+.+|...+..+     .|+|++++++++..++.
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~hp~iv~~~~~~~~~~~  105 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-----DKPGVARVLDVVHTRAG  105 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEEETTE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-----CCCCcceeeEEEEECCc
Confidence            468999999999999999999999999999999975422    235667788877666     78999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .|+||||+ |++|.+++...    .....+..++.|++.||.|||++||+||||||+||+++                  
T Consensus       106 ~~lv~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~------------------  163 (286)
T 3uqc_A          106 GLVVAEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVS------------------  163 (286)
T ss_dssp             EEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE------------------
T ss_pred             EEEEEEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEc------------------
Confidence            99999999 88999998542    45567888999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                               .++.++|++++                 |++       +++.++|||||||++|+|++|+.||.+.+..+.
T Consensus       164 ---------~~g~~kl~~~~-----------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~  210 (286)
T 3uqc_A          164 ---------IDGDVVLAYPA-----------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSG  210 (286)
T ss_dssp             ---------TTSCEEECSCC-----------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC
T ss_pred             ---------CCCCEEEEecc-----------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh
Confidence                     44556665332                 333       368999999999999999999999986443110


Q ss_pred             HHHHHH-HcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          278 LAMMER-VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       278 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      .....+ ..+..                                           ..........+.++.++|.+||+.|
T Consensus       211 ~~~~~~~~~~~~-------------------------------------------~~~~~~~~~~~~~l~~li~~~l~~d  247 (286)
T 3uqc_A          211 LAPAERDTAGQP-------------------------------------------IEPADIDRDIPFQISAVAARSVQGD  247 (286)
T ss_dssp             SEECCBCTTSCB-------------------------------------------CCHHHHCTTSCHHHHHHHHHHHCTT
T ss_pred             hHHHHHHhccCC-------------------------------------------CChhhcccCCCHHHHHHHHHHcccC
Confidence            000000 00000                                           0011223456788999999999999


Q ss_pred             CCCCcCHHHHhc
Q 017021          357 PTDRLTAREALR  368 (379)
Q Consensus       357 P~~Rpta~e~l~  368 (379)
                      |++| |++|+++
T Consensus       248 P~~R-s~~el~~  258 (286)
T 3uqc_A          248 GGIR-SASTLLN  258 (286)
T ss_dssp             SSCC-CHHHHHH
T ss_pred             CccC-CHHHHHH
Confidence            9999 9999985

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=9.2e-39  Score=325.60  Aligned_cols=236  Identities=24%  Similarity=0.341  Sum_probs=188.6

Q ss_pred             hhhhhhhccccccceeEEEEEecC-CCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce-
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRE-RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH-  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~-~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~-  118 (379)
                      -.|++.++||+|+||.||+|++.. +++.||||++...  ......+..|+.++..+     .|+||+++++++...+. 
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~  154 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV-----VHPSIVQIFNFVEHTDRH  154 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGC-----CCTTBCCEEEEEEEECTT
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhc-----CCCCcCeEeeeEeecCCC
Confidence            579999999999999999999976 7899999998632  23344566788877776     78999999999987655 


Q ss_pred             ----EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          119 ----ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       119 ----~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                          .|+||||+ +++|.+++..    .+++..+..++.||+.||.|||+.||+||||||+||+++              
T Consensus       155 ~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~--------------  216 (681)
T 2pzi_A          155 GDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT--------------  216 (681)
T ss_dssp             SCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC--------------
T ss_pred             CCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEe--------------
Confidence                79999999 8899887654    589999999999999999999999999999999999993              


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                   . ..++|+|||.+...... ....||+.|+|||++.+.. +.++|||||||++|+|++|..||.+..
T Consensus       217 -------------~-~~~kl~DFG~a~~~~~~-~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~  280 (681)
T 2pzi_A          217 -------------E-EQLKLIDLGAVSRINSF-GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRY  280 (681)
T ss_dssp             -------------S-SCEEECCCTTCEETTCC-SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEE
T ss_pred             -------------C-CcEEEEecccchhcccC-CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccc
Confidence                         3 26899999988765443 4557999999999987754 899999999999999999988886421


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..           ..+..                                   .+         ....++.+.++|.+||
T Consensus       281 ~~-----------~~~~~-----------------------------------~~---------~~~~~~~l~~li~~~l  305 (681)
T 2pzi_A          281 VD-----------GLPED-----------------------------------DP---------VLKTYDSYGRLLRRAI  305 (681)
T ss_dssp             CS-----------SCCTT-----------------------------------CH---------HHHHCHHHHHHHHHHT
T ss_pred             cc-----------ccccc-----------------------------------cc---------ccccCHHHHHHHhhhc
Confidence            10           00000                                   00         0013467899999999


Q ss_pred             ccCCCCCcCHHHHhcCCCC
Q 017021          354 RYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f  372 (379)
                      +.||.+||++.+.+.|+|+
T Consensus       306 ~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          306 DPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             CSSGGGSCSSHHHHHHHHH
T ss_pred             cCChhhCCCHHHHHHHHHH
Confidence            9999999999888888775

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.96  E-value=1.2e-31  Score=266.66  Aligned_cols=181  Identities=19%  Similarity=0.119  Sum_probs=124.8

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeecc-----------chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGI-----------KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-----------~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      ..++.|+.|....++....|+.||+|++...           ......+.+|+++|.++    ..|+|++++++++++++
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~----~~~~~i~~~~~~~ed~~  315 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQP----PAGFDAPAVLAHGENAQ  315 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSC----CTTCCCCCEEEEEECSS
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhc----CCCCCeeEEEEEEEECC
Confidence            3457788888888887888999999999632           12334566788887776    46789999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      ..||||||+ |++|.+++...+  .++..   .++.||+.||+|+|++||+||||||+|||+                  
T Consensus       316 ~~yLVMEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL------------------  372 (569)
T 4azs_A          316 SGWLVMEKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMV------------------  372 (569)
T ss_dssp             EEEEEEECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEE------------------
T ss_pred             EEEEEEecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEE------------------
Confidence            999999999 999999998765  56654   478999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCC
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~  266 (379)
                               +.++.+||+|||+|+......   ...+||+.|+|||++.+. +..++|+||+|++++++.++.
T Consensus       373 ---------~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          373 ---------DARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPW  435 (569)
T ss_dssp             ---------CTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred             ---------CCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCCC-CCCcccccccccchhhhcccc
Confidence                     556678888888886544332   345799999999998774 567899999999988765543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.92  E-value=1.2e-25  Score=222.17  Aligned_cols=176  Identities=19%  Similarity=0.184  Sum_probs=137.4

Q ss_pred             hhccccccceeEEEEEecCCCceEEEEEeeccc---------hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           48 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        48 ~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      .+.||+|+||.||+|  ...++.+|+|+.....         .....+.+|+.++.++     .|+|++.+..+....+.
T Consensus       341 ~~~LG~G~fg~Vy~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-----~h~nIv~~~~~~~~~~~  413 (540)
T 3en9_A          341 EHLIGKGAEADIKRD--SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-----KDFGIPAPYIFDVDLDN  413 (540)
T ss_dssp             -------CCEEEEEE--ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-----GGGTCCCCCEEEEETTT
T ss_pred             CCEEeeCCCEEEEEE--EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-----CCCCcCceEEEEEeCCc
Confidence            468999999999999  4557889999864321         1134467899999998     66888855555556777


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .|+||||+ +++|.+++..          +..++.|++.||.|||++||+||||||+|||+                   
T Consensus       414 ~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl-------------------  464 (540)
T 3en9_A          414 KRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF-------------------  464 (540)
T ss_dssp             TEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEE-------------------
T ss_pred             cEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEE-------------------
Confidence            89999999 8999999865          45889999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC----------CcccccCCccchhhhhC--CCCCCccchHhHHHHHHHHHhC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ----------NYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTG  265 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----------~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~~l~~g  265 (379)
                              +.  .++|+|||+++......          ....||+.|+|||++..  ..|+..+|+||..+-..+-..+
T Consensus       465 --------~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~  534 (540)
T 3en9_A          465 --------DK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVER  534 (540)
T ss_dssp             --------SS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHT
T ss_pred             --------CC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence                    44  78999999998765532          24579999999999976  5678889999999888887777


Q ss_pred             CCCC
Q 017021          266 EALF  269 (379)
Q Consensus       266 ~~pf  269 (379)
                      +.+|
T Consensus       535 r~rY  538 (540)
T 3en9_A          535 RARY  538 (540)
T ss_dssp             CSCC
T ss_pred             cccc
Confidence            6665

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.89  E-value=9.8e-24  Score=191.79  Aligned_cols=154  Identities=24%  Similarity=0.326  Sum_probs=117.0

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccch-------------------hhHhHHHHHHHHHHHHhcCCCCC
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-------------------YREAAMIEIEVLQQLAKHDKGGN  104 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------------------~~~~~~~e~~~l~~l~~~~~~~~  104 (379)
                      .|++.+.||+|+||.||+|.+ .+|+.||+|+++....                   ....+.+|+.++..+.       
T Consensus        91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-------  162 (282)
T 1zar_A           91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-------  162 (282)
T ss_dssp             CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-------
T ss_pred             EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-------
Confidence            445669999999999999999 8899999999963211                   2445778999998883       


Q ss_pred             eeEEecceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccc
Q 017021          105 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEY  183 (379)
Q Consensus       105 ~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~  183 (379)
                      | +.+.+.+.. +..|+||||+ |++|.+ +..        .....++.|++.||.|||+.||+||||||+|||+     
T Consensus       163 ~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl-----  226 (282)
T 1zar_A          163 G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV-----  226 (282)
T ss_dssp             T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE-----
T ss_pred             C-CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEE-----
Confidence            2 344444433 5569999999 889987 321        1244689999999999999999999999999999     


Q ss_pred             cccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC----------CCCCCccchH
Q 017021          184 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG----------LGWTYPCDIW  253 (379)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~sDvw  253 (379)
                                            + ++.++|+|||.+.          .+..+.|||.+..          ..++..+|+|
T Consensus       227 ----------------------~-~~~vkl~DFG~a~----------~~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~  273 (282)
T 1zar_A          227 ----------------------S-EEGIWIIDFPQSV----------EVGEEGWREILERDVRNIITYFSRTYRTEKDIN  273 (282)
T ss_dssp             ----------------------E-TTEEEECCCTTCE----------ETTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_pred             ----------------------E-CCcEEEEECCCCe----------ECCCCCHHHHHHHHHHHHHHHHHHhcCCCCChH
Confidence                                  4 5678999999885          3455789998853          3355555665


Q ss_pred             h
Q 017021          254 S  254 (379)
Q Consensus       254 S  254 (379)
                      .
T Consensus       274 ~  274 (282)
T 1zar_A          274 S  274 (282)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.83  E-value=1.7e-20  Score=168.32  Aligned_cols=139  Identities=16%  Similarity=0.163  Sum_probs=105.8

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCce--EEEEEeeccch-------------------------hhHhHHHHHHHHH
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEM--VAIKIVRGIKK-------------------------YREAAMIEIEVLQ   94 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~--vAiK~~~~~~~-------------------------~~~~~~~e~~~l~   94 (379)
                      +..|++.+.||+|+||.||+|.+..+|+.  ||||+++....                         ....+.+|..++.
T Consensus        46 ~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~  125 (258)
T 1zth_A           46 GYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLE  125 (258)
T ss_dssp             TSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHH
T ss_pred             CCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHH
Confidence            34467889999999999999998778999  99999753211                         0125678999999


Q ss_pred             HHHhcCCCCCeeEEecceeeecceEEEEEeCCC--C----CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCCc
Q 017021           95 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--S----SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-DLCMI  167 (379)
Q Consensus        95 ~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~--~----sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~ii  167 (379)
                      .+.+.....|.+..   .    +..++||||++  +    +|.++...     .++..+..++.|++.||.+|| +.||+
T Consensus       126 ~l~~~~i~~p~~~~---~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~giv  193 (258)
T 1zth_A          126 RAKEAGVSVPQPYT---Y----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELV  193 (258)
T ss_dssp             HHHHTTCCCCCEEE---E----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEE
T ss_pred             HHHhCCCCCCeEEE---c----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEE
Confidence            98765333333332   1    35689999994  3    77766432     234567789999999999999 99999


Q ss_pred             ccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccc
Q 017021          168 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY  221 (379)
Q Consensus       168 H~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~  221 (379)
                      ||||||+|||+                           +.  .++|+|||.|..
T Consensus       194 HrDlkp~NILl---------------------------~~--~~~liDFG~a~~  218 (258)
T 1zth_A          194 HADLSEYNIMY---------------------------ID--KVYFIDMGQAVT  218 (258)
T ss_dssp             CSSCSTTSEEE---------------------------SS--SEEECCCTTCEE
T ss_pred             eCCCCHHHEEE---------------------------cC--cEEEEECccccc
Confidence            99999999999                           44  789999999864

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.68  E-value=6.9e-17  Score=151.10  Aligned_cols=148  Identities=16%  Similarity=0.149  Sum_probs=99.8

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccch-----------------------hhHhHHHHHHHHHHHH
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-----------------------YREAAMIEIEVLQQLA   97 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-----------------------~~~~~~~e~~~l~~l~   97 (379)
                      .+..|+|..+||+|++|.||+|.+. +|+.||||+++....                       .+..+.+|...+.++.
T Consensus        93 rg~iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~  171 (397)
T 4gyi_A           93 RKDVYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALY  171 (397)
T ss_dssp             TTSCSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH
Confidence            3445889999999999999999975 589999999752100                       0112235677777775


Q ss_pred             hcCCCCCeeEEecceeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcE
Q 017021           98 KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENV  176 (379)
Q Consensus        98 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Ni  176 (379)
                      .....   ++..+.   . ...++||||+ |.+|.++..        ......++.||+.+|.+||+.||+||||||.||
T Consensus       172 ~~gv~---vp~p~~---~-~~~~LVME~i~G~~L~~l~~--------~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NI  236 (397)
T 4gyi_A          172 EEGFP---VPEPIA---Q-SRHTIVMSLVDALPMRQVSS--------VPDPASLYADLIALILRLAKHGLIHGDFNEFNI  236 (397)
T ss_dssp             HTTCS---CCCEEE---E-ETTEEEEECCSCEEGGGCCC--------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSE
T ss_pred             hcCCC---CCeeee---c-cCceEEEEecCCccHhhhcc--------cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHE
Confidence            43221   222111   1 1237999999 777754321        123456789999999999999999999999999


Q ss_pred             EEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccc
Q 017021          177 LLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY  221 (379)
Q Consensus       177 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~  221 (379)
                      |+..++...-+                 ......+.||||+.+..
T Consensus       237 Ll~~dgd~~d~-----------------~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          237 LIREEKDAEDP-----------------SSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             EEEEEECSSCT-----------------TSEEEEEEECCCTTCEE
T ss_pred             EEeCCCCcccc-----------------cccccceEEEEeCCccc
Confidence            99766521100                 01122488999998764

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.25  E-value=2.1e-11  Score=108.97  Aligned_cols=107  Identities=10%  Similarity=0.048  Sum_probs=80.0

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      .|++...++.|+.+.||++...  ++.+++|+..... .....+..|..++..+..    +..+++++++....+..|+|
T Consensus        15 ~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~----~~~vP~v~~~~~~~~~~~lv   88 (263)
T 3tm0_A           15 KYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEG----KLPVPKVLHFERHDGWSNLL   88 (263)
T ss_dssp             TSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT----TSCCCCEEEEEEETTEEEEE
T ss_pred             cceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhc----CCCCCeEEEEEecCCceEEE
Confidence            3667788888889999999743  6789999987421 223457789999988854    34577788888888899999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD  163 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~  163 (379)
                      ||++ |.+|.+.+.       +......++.++..+|..||+
T Consensus        89 ~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           89 MSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             EECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhC
Confidence            9999 778876531       112234677889999999998

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.03  E-value=4.8e-10  Score=99.57  Aligned_cols=97  Identities=13%  Similarity=0.109  Sum_probs=65.5

Q ss_pred             ccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-CCCH
Q 017021           52 GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSL  130 (379)
Q Consensus        52 g~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~sL  130 (379)
                      +.|..+.||++.. .+|..+++|+....  .......|..++..+...   ...+++++.+...++..++|||++ |.+|
T Consensus        29 ~gg~~~~v~~~~~-~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~---~~~vP~~~~~~~~~~~~~~v~e~i~G~~l  102 (264)
T 1nd4_A           29 IGCSDAAVFRLSA-QGRPVLFVKTDLSG--ALNELQDEAARLSWLATT---GVPCAAVLDVVTEAGRDWLLLGEVPGQDL  102 (264)
T ss_dssp             CTTSSCEEEEEEC-TTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTT---TCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             cCCCCceEEEEec-CCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhC---CCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence            3556699999964 45778999997643  234566799999888653   233666777777777899999999 7676


Q ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 017021          131 YDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL  164 (379)
Q Consensus       131 ~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~  164 (379)
                      .  ..     ....   ..++.+++..|..||+.
T Consensus       103 ~--~~-----~~~~---~~~~~~l~~~l~~lh~~  126 (264)
T 1nd4_A          103 L--SS-----HLAP---AEKVSIMADAMRRLHTL  126 (264)
T ss_dssp             T--TS-----CCCH---HHHHHHHHHHHHHHTTS
T ss_pred             C--cC-----cCCH---hHHHHHHHHHHHHHhCC
Confidence            3  11     1221   24556667777777754

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.92  E-value=3.7e-09  Score=98.79  Aligned_cols=106  Identities=15%  Similarity=0.136  Sum_probs=73.6

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEee--ccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec---ceEEE
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVR--GIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---NHICI  121 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~--~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~---~~~~l  121 (379)
                      +.|+.|.++.||++...  +..+++|+..  ...  ........|..++..+...   +..+++++..+.+.   +..|+
T Consensus        44 ~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~---~vpvP~~~~~~~~~~~~g~~~~  118 (359)
T 3dxp_A           44 EQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGT---DVPVAKMYALCEDESVIGRAFY  118 (359)
T ss_dssp             EECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTS---SSCCCCEEEEECCTTTTSSCEE
T ss_pred             EEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcC---CCCCCcEEEECCCCCccCCeEE
Confidence            67889999999999754  4678999876  322  1234667799999998652   34466676666655   45899


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD  163 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~  163 (379)
                      |||++ |..+.+..    ...++......++.+++.+|..||+
T Consensus       119 vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          119 IMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             EEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhC
Confidence            99999 65653311    1236788888899999999999997

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.88  E-value=3.4e-09  Score=96.73  Aligned_cols=103  Identities=16%  Similarity=0.117  Sum_probs=69.0

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec---ceEEEEEeC
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---NHICIVFEK  125 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~---~~~~lv~e~  125 (379)
                      +.++.|....||++.     ..+++|+.... ........|..++..+....  ...++..+......   ...|+||++
T Consensus        26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~--~v~vP~~~~~~~~~~~~~~~~~vm~~   97 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN-----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKL--PLPIPEVVFTGMPSETYQMSFAGFTK   97 (304)
T ss_dssp             CEEEECSSEEEEEST-----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSS--SSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred             EecCCCCcceEEEEC-----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcC--CCCCCceEeecCCCCCCCcceEEEcc
Confidence            558899999999874     45899987533 33556778999988874421  11234443333322   246899999


Q ss_pred             C-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017021          126 L-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD  163 (379)
Q Consensus       126 ~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~  163 (379)
                      + |.++.+....    .++..+...++.+++..|..||+
T Consensus        98 i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~  132 (304)
T 3sg8_A           98 IKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHS  132 (304)
T ss_dssp             CCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHc
Confidence            9 7677643322    36777778888888888888885

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.37  E-value=3.7e-06  Score=76.55  Aligned_cols=102  Identities=18%  Similarity=0.106  Sum_probs=63.4

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee-ecceEEEEEeCC-
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD-YRNHICIVFEKL-  126 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~-  126 (379)
                      +.++.|....||+.     +..+++|+.. ..........|..++..+..+..  ..++..+.+.. ..+..|++|+++ 
T Consensus        25 ~~l~~G~~n~v~~v-----g~~~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~~--v~VP~~~~~~~~~~g~~~~v~e~i~   96 (306)
T 3tdw_A           25 ESLGEGFRNYAILV-----NGDWVFRFPK-SQQGADELNKEIQLLPLLVGCVK--VNIPQYVYIGKRSDGNPFVGYRKVQ   96 (306)
T ss_dssp             EEEEECSSEEEEEE-----TTTEEEEEES-SHHHHHHHHHHHHHHHHHTTTCS--SBCCCEEEEEECTTSCEEEEEECCC
T ss_pred             eecCCCcceeEEEE-----CCEEEEEecC-CchHHHHHHHHHHHHHHHHhcCC--CCCCCeEeecccCCCceEEEEeccC
Confidence            45677888899988     4668999854 23345567789999999865321  23444444442 456688999999 


Q ss_pred             CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 017021          127 GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH  162 (379)
Q Consensus       127 ~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH  162 (379)
                      |.++.+..-.    .++......+..++...|..||
T Consensus        97 G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH  128 (306)
T 3tdw_A           97 GQILGEDGMA----VLPDDAKDRLALQLAEFMNELS  128 (306)
T ss_dssp             SEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CeECchhhhh----hCCHHHHHHHHHHHHHHHHHHh
Confidence            7677653211    2344444455555555555555

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.35  E-value=2.7e-06  Score=75.76  Aligned_cols=101  Identities=14%  Similarity=0.182  Sum_probs=69.3

Q ss_pred             cccccce-eEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-CC
Q 017021           51 MGEGTFG-QVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GS  128 (379)
Q Consensus        51 Lg~G~~g-~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~  128 (379)
                      +..|..| .||+......+..+++|+-...  ....+..|...+..+..    +..+++++.+..+++..|+|||++ |.
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~----~vPVP~v~~~~~~~~~~~lvme~l~G~  105 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTA----FMPLPTIKHFIRTPDDAWLLTTAIPGK  105 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTT----TSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhcc----CCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence            3445444 6899887777788999987633  23456678888888743    234777888888889999999999 77


Q ss_pred             CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017021          129 SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD  163 (379)
Q Consensus       129 sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~  163 (379)
                      ++.+......      .....+..++...|..||+
T Consensus       106 ~~~~~~~~~~------~~~~~~~~~l~~~L~~Lh~  134 (272)
T 4gkh_A          106 TAFQVLEEYP------DSGENIVDALAVFLRRLHS  134 (272)
T ss_dssp             EHHHHHHHCG------GGHHHHHHHHHHHHHHHHT
T ss_pred             cccccccCCH------HHHHHHHHHHHHHHHHhcC
Confidence            8777654421      1223455566677777774

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.02  E-value=2.8e-05  Score=73.37  Aligned_cols=75  Identities=20%  Similarity=0.235  Sum_probs=47.1

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccc--------hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      +.||.|..+.||++....+++.+++|......        ........|..++..+....  ...++.++.+  +....+
T Consensus        36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~--~~~vP~~~~~--d~~~~~  111 (397)
T 2olc_A           36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHV--PHLVPRVFYS--DTEMAV  111 (397)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTC--GGGSCCEEEE--ETTTTE
T ss_pred             EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhC--CCCcCeEEEE--cCCccE
Confidence            67899999999999876667889999864211        11234567888888875432  1234444433  344568


Q ss_pred             EEEeCCC
Q 017021          121 IVFEKLG  127 (379)
Q Consensus       121 lv~e~~~  127 (379)
                      +|||++.
T Consensus       112 lvmE~l~  118 (397)
T 2olc_A          112 TVMEDLS  118 (397)
T ss_dssp             EEECCCT
T ss_pred             EEEEeCC
Confidence            9999993

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.87  E-value=0.00024  Score=65.10  Aligned_cols=76  Identities=13%  Similarity=0.184  Sum_probs=42.6

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEec-c--eeeecceEEEEEeC
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR-N--WFDYRNHICIVFEK  125 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~-~--~~~~~~~~~lv~e~  125 (379)
                      +.|+.|..+.||++...  +..+++|+....   ......|..++..+.......|.++... +  +....+..+++|++
T Consensus        38 ~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~  112 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTD--SGAVCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW  112 (346)
T ss_dssp             EECC----CEEEEEEET--TEEEEEEEECSC---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred             eeccccccCcEEEEEeC--CCCEEEEecCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence            45666778899998743  345999998752   2233446677777765432223332211 1  12346778999999


Q ss_pred             C-CCC
Q 017021          126 L-GSS  129 (379)
Q Consensus       126 ~-~~s  129 (379)
                      + |.+
T Consensus       113 i~G~~  117 (346)
T 2q83_A          113 IEGRP  117 (346)
T ss_dssp             CCCBC
T ss_pred             ecCcc
Confidence            9 543

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.70  E-value=7e-05  Score=69.44  Aligned_cols=79  Identities=9%  Similarity=0.068  Sum_probs=51.3

Q ss_pred             hcc-ccccceeEEEEEec--C----CCceEEEEEeeccc---h-hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec-
Q 017021           49 SKM-GEGTFGQVLECWDR--E----RKEMVAIKIVRGIK---K-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR-  116 (379)
Q Consensus        49 ~~L-g~G~~g~V~~~~~~--~----~~~~vAiK~~~~~~---~-~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~-  116 (379)
                      +.| +.|....+|+....  .    +++.+++|+.....   . .......|..++..+....  ...+++++.+..+. 
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~--~vpvP~v~~~~~~~~  103 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELT--DVPVPRVRWIETTGD  103 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHC--CSCCCCEEEEECSST
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcC--CCCCCcEEEEccCCC
Confidence            567 77888999988643  1    15678999875432   1 1245677899998887651  12355555555444 


Q ss_pred             --ceEEEEEeCC-CCC
Q 017021          117 --NHICIVFEKL-GSS  129 (379)
Q Consensus       117 --~~~~lv~e~~-~~s  129 (379)
                        +..|+|||++ |.+
T Consensus       104 ~~g~~~~v~e~l~G~~  119 (357)
T 3ats_A          104 VLGTPFFLMDYVEGVV  119 (357)
T ss_dssp             TTSSCEEEEECCCCBC
T ss_pred             ccCCceEEEEecCCCC
Confidence              4578999999 544

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.42  E-value=0.001  Score=59.97  Aligned_cols=69  Identities=12%  Similarity=-0.036  Sum_probs=43.1

Q ss_pred             hhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-
Q 017021           48 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-  126 (379)
Q Consensus        48 ~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-  126 (379)
                      .+.|+.|....+|++      +.+++|+.............|..++..+...... |.+   +...  .+.-+++++++ 
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~-P~~---~~~~--~~~~~~v~e~i~   90 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVS-PEV---LHVD--PATGVMVTRYIA   90 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHTTSS-CCE---EEEC--TTTCCEEEECCT
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCC-Cce---EEEE--CCCCEEEEeecC
Confidence            377888999999999      4589998864322222334588888888765433 333   3322  33346889998 


Q ss_pred             CC
Q 017021          127 GS  128 (379)
Q Consensus       127 ~~  128 (379)
                      ++
T Consensus        91 ~g   92 (301)
T 3dxq_A           91 GA   92 (301)
T ss_dssp             TC
T ss_pred             CC
Confidence            54

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.18  E-value=0.0029  Score=57.39  Aligned_cols=75  Identities=23%  Similarity=0.240  Sum_probs=56.0

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-C
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-G  127 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~  127 (379)
                      +.|+.|....+|+...  ++..+++|+....  ....+..|...+..+....  ...+++.+.+....+..|+|||++ |
T Consensus        42 ~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~--~v~VP~vl~~~~~~g~~~lvme~l~G  115 (312)
T 3jr1_A           42 EKLYSGEMNEIWLIND--EVQTVFVKINERS--YRSMFRAEADQLALLAKTN--SINVPLVYGIGNSQGHSFLLLEALNK  115 (312)
T ss_dssp             EEECCSSSSEEEEEES--SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTT--SSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred             EEeCCccceeeeEEEE--CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhC--CCCcceEEEEeecCCceEEEEEeccC
Confidence            6788899999999974  4677899987633  2455677899998886631  245677777777778899999999 5


Q ss_pred             CC
Q 017021          128 SS  129 (379)
Q Consensus       128 ~s  129 (379)
                      ..
T Consensus       116 ~~  117 (312)
T 3jr1_A          116 SK  117 (312)
T ss_dssp             CC
T ss_pred             CC
Confidence            44

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.16  E-value=0.0015  Score=61.96  Aligned_cols=74  Identities=16%  Similarity=0.181  Sum_probs=43.1

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeec-----cch---hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRG-----IKK---YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~---~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      +.||.|..+.||++..  +++.+++|....     ...   .......|.+++..+....  ...+++++.+.  .+..+
T Consensus        40 ~~l~~G~~n~vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~--~~~vP~v~~~~--~~~~~  113 (420)
T 2pyw_A           40 KEVGDGNLNFVFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLS--PDHVPEVYHFD--RTMAL  113 (420)
T ss_dssp             EECCCSSSCEEEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHS--GGGSCCEEEEE--TTTTE
T ss_pred             EEccCCCcEEEEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhC--CCCCCeEEEEC--CCccE
Confidence            6788899999999963  467899994321     111   0122333555544443221  12345554443  46678


Q ss_pred             EEEeCC-CC
Q 017021          121 IVFEKL-GS  128 (379)
Q Consensus       121 lv~e~~-~~  128 (379)
                      +|||++ ++
T Consensus       114 lv~e~l~~g  122 (420)
T 2pyw_A          114 IGMRYLEPP  122 (420)
T ss_dssp             EEECCCCTT
T ss_pred             EEEeecCCc
Confidence            999999 65

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.15  E-value=0.0023  Score=54.31  Aligned_cols=98  Identities=13%  Similarity=0.017  Sum_probs=59.0

Q ss_pred             CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCC
Q 017021          128 SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP  206 (379)
Q Consensus       128 ~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (379)
                      .||.+++...+ .++++++++.++.|.+.+|.-+- ...-..+=+.|..|++..+|                        
T Consensus        33 vSL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG------------------------   87 (229)
T 2yle_A           33 LSLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDG------------------------   87 (229)
T ss_dssp             EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTS------------------------
T ss_pred             ccHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCC------------------------
Confidence            47999998866 47999999999999999887662 11112333456777774443                        


Q ss_pred             CCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh
Q 017021          207 KSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       207 ~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~  264 (379)
                         .+.+.+ ..+.         .....+.|||... ...+.+.=|||||+++|..+-
T Consensus        88 ---~V~f~~-~~s~---------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A           88 ---AVTLAP-AADD---------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             ---CEEECC-C---------------------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred             ---ceeccc-cccc---------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence               343321 1100         1123466787653 234567789999999999886

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.07  E-value=0.0068  Score=55.07  Aligned_cols=74  Identities=15%  Similarity=0.196  Sum_probs=47.0

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecce-----eeecceEEEEE
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW-----FDYRNHICIVF  123 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~-----~~~~~~~~lv~  123 (379)
                      ..|+ |....||++.. .+|+.+++|+.............|..++..+......   ++..+..     ...++..+++|
T Consensus        32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~---vp~~~~~~g~~~~~~~g~~~~l~  106 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVP---VAAPVAFNGQTLLNHQGFYFAVF  106 (328)
T ss_dssp             EEEC-CSSSEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCS---BCCCCCBTTBSCEEETTEEEEEE
T ss_pred             Eeec-CcccceEEEEc-CCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCe---ecceeecCCcEEEEECCEEEEEE
Confidence            3456 77788998863 3456799999863322345566788888888764322   3333322     22356778999


Q ss_pred             eCCC
Q 017021          124 EKLG  127 (379)
Q Consensus       124 e~~~  127 (379)
                      +++.
T Consensus       107 ~~i~  110 (328)
T 1zyl_A          107 PSVG  110 (328)
T ss_dssp             ECCC
T ss_pred             EecC
Confidence            9993

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=96.95  E-value=0.0046  Score=56.46  Aligned_cols=78  Identities=9%  Similarity=0.019  Sum_probs=39.5

Q ss_pred             hcccccccee-EEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-
Q 017021           49 SKMGEGTFGQ-VLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-  126 (379)
Q Consensus        49 ~~Lg~G~~g~-V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-  126 (379)
                      +.|+.|+... +|+... .+++.+++|......  ......|..++..+....   ..+++++......+  +++||++ 
T Consensus        24 ~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g---~~vP~v~~~d~~~g--~ll~e~l~   95 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLD---ISAPEIYAEEHARG--LLLIEDLG   95 (333)
T ss_dssp             CC--------CCEEEEC-TTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTT---CBCCCEEEEETTTT--EEEECCCC
T ss_pred             eECCCCCCCceEEEEEc-CCCCeEEEEECCCCC--CccccHHHHHHHHHHhCC---CCCCceeeecCCCC--EEEEeeCC
Confidence            4555554443 667753 225667787654321  134456788888886643   23444444322333  6899998 


Q ss_pred             CCCHHHHH
Q 017021          127 GSSLYDFL  134 (379)
Q Consensus       127 ~~sL~~~l  134 (379)
                      +.++.+.+
T Consensus        96 ~~~l~~~l  103 (333)
T 3csv_A           96 DALFTEVI  103 (333)
T ss_dssp             SCBHHHHH
T ss_pred             CcchHHHh
Confidence            55665443

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=96.94  E-value=0.0066  Score=55.01  Aligned_cols=77  Identities=10%  Similarity=0.067  Sum_probs=44.2

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEec-c--eeeecceEEEEEeC
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR-N--WFDYRNHICIVFEK  125 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~-~--~~~~~~~~~lv~e~  125 (379)
                      +.|+.|....+|++...  +..+++|+.... ........|..++..+.......|.++... +  +....+..++++++
T Consensus        28 ~~i~~G~~n~~~~v~~~--~g~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~  104 (322)
T 2ppq_A           28 KGIAEGVENSNFLLHTT--KDPLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF  104 (322)
T ss_dssp             EEECC---EEEEEEEES--SCCEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred             eccCCCcccceEEEEeC--CccEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence            56677888899998743  336899998742 123345568888888876543223332211 1  11234667999999


Q ss_pred             C-CC
Q 017021          126 L-GS  128 (379)
Q Consensus       126 ~-~~  128 (379)
                      + |.
T Consensus       105 l~G~  108 (322)
T 2ppq_A          105 LEGM  108 (322)
T ss_dssp             CCCB
T ss_pred             CCCc
Confidence            9 53

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=96.43  E-value=0.0063  Score=56.76  Aligned_cols=70  Identities=14%  Similarity=0.171  Sum_probs=41.3

Q ss_pred             hccccccceeEEEEEecC-------CCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           49 SKMGEGTFGQVLECWDRE-------RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~-------~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      +.|..|-...+|++....       +++.+++|+.-..........+|..+++.+..... .   ++++..+..    .+
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv-~---P~ll~~~~~----g~  127 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSL-G---PQLYGVFPE----GR  127 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTS-S---CCEEEEETT----EE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCC-C---CeEEEEcCC----cc
Confidence            456668888899998642       35789999974322234455579999988877553 2   344444433    28


Q ss_pred             EEeCC
Q 017021          122 VFEKL  126 (379)
Q Consensus       122 v~e~~  126 (379)
                      ||||+
T Consensus       128 v~e~i  132 (379)
T 3feg_A          128 LEQYI  132 (379)
T ss_dssp             EEECC
T ss_pred             EEEEe
Confidence            99998

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.14  E-value=0.056  Score=49.41  Aligned_cols=70  Identities=13%  Similarity=0.107  Sum_probs=43.2

Q ss_pred             ccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecce------eeecceEEEEEeC
Q 017021           52 GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW------FDYRNHICIVFEK  125 (379)
Q Consensus        52 g~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~------~~~~~~~~lv~e~  125 (379)
                      |.|....||++... +| .+++|+.....     ...|..++..+......  .++..+..      ....+..+++|++
T Consensus        32 G~g~~N~vy~v~~~-~g-~~vLK~~~~~~-----~~~E~~~l~~L~~~g~~--~vp~pi~~~~G~~~~~~~g~~~~l~~~  102 (339)
T 3i1a_A           32 GADTNAFAYQADSE-SK-SYFIKLKYGYH-----DEINLSIIRLLHDSGIK--EIIFPIHTLEAKLFQQLKHFKIIAYPF  102 (339)
T ss_dssp             TSCSSCEEEEEECS-SC-EEEEEEEECSS-----CCHHHHHHHHHHHTTCC--SSCCCCCCTTSCSSEECSSEEEEEEEC
T ss_pred             cCccccceEEEEeC-CC-CEEEEEecCcc-----chHHHHHHHHHHhcCCc--ccccceecCCCCEEEEECCEEEEEEec
Confidence            44446789999743 34 89999876433     14577788877664322  13333321      2345788999999


Q ss_pred             C-CCCH
Q 017021          126 L-GSSL  130 (379)
Q Consensus       126 ~-~~sL  130 (379)
                      + |..+
T Consensus       103 i~G~~~  108 (339)
T 3i1a_A          103 IHAPNG  108 (339)
T ss_dssp             CCCCBT
T ss_pred             cCCCcC
Confidence            9 5443

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=96.10  E-value=0.015  Score=53.76  Aligned_cols=70  Identities=21%  Similarity=0.137  Sum_probs=40.1

Q ss_pred             hccccccceeEEEEEecC--------CCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           49 SKMGEGTFGQVLECWDRE--------RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~--------~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      +.|+.|....+|++....        .++.+++|+.............|..++..+..... .|   +++...  .  -+
T Consensus        39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~-~P---~~~~~~--~--~~  110 (369)
T 3c5i_A           39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKI-AP---QLLNTF--N--GG  110 (369)
T ss_dssp             EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTS-SC---CEEEEE--T--TE
T ss_pred             EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCC-CC---ceEEec--C--Cc
Confidence            566778888999987543        13678999876432221223568888888866432 23   333322  2  26


Q ss_pred             EEEeCC
Q 017021          121 IVFEKL  126 (379)
Q Consensus       121 lv~e~~  126 (379)
                      +||+++
T Consensus       111 ~v~e~i  116 (369)
T 3c5i_A          111 RIEEWL  116 (369)
T ss_dssp             EEEECC
T ss_pred             EEEEEe
Confidence            899998

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.02  E-value=0.042  Score=48.87  Aligned_cols=71  Identities=13%  Similarity=0.086  Sum_probs=47.1

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccch-hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  126 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~  126 (379)
                      +.+|.|..+.||+++. .+|+.|++|+...... ....+..|...|..+....  ...+++.+..    +..++|||+.
T Consensus        21 ~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~--~vpvP~v~~~----~~~~lv~e~l   92 (288)
T 3f7w_A           21 AERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSF--GSPVPQVAGW----DDRTLAMEWV   92 (288)
T ss_dssp             EEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCST--TCCSCCEEEE----ETTEEEEECC
T ss_pred             EecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhC--CCCcceEEec----cCceEEEEee
Confidence            6789999999999984 5688999998753322 2234556889888885432  1223444332    2247889998

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=95.72  E-value=0.11  Score=49.61  Aligned_cols=70  Identities=11%  Similarity=0.056  Sum_probs=42.7

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  126 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~  126 (379)
                      +.|+.|-...+|++....++..+++|+.............|..++..+....    ..++++..+. +   .+|++|+
T Consensus       114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~g----l~P~ll~~~~-~---G~v~e~I  183 (458)
T 2qg7_A          114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKN----IAKKIYVFFT-N---GRIEEFM  183 (458)
T ss_dssp             EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSS----SBCCEEEEET-T---EEEEECC
T ss_pred             EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcC----CCCCEEEEeC-C---eEEEEee
Confidence            5677788899999986554578999987532211112246888888885533    2344555442 2   2589998

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=95.43  E-value=0.12  Score=48.86  Aligned_cols=69  Identities=14%  Similarity=0.178  Sum_probs=44.5

Q ss_pred             hccccccceeEEEEEecC-------CCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           49 SKMGEGTFGQVLECWDRE-------RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~-------~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      +.|+.|....+|++....       +++.+++|+..... .......|..++..+..... .   +++++.+..    .+
T Consensus        79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~li~E~~~l~~L~~~g~-~---P~l~~~~~~----g~  149 (429)
T 1nw1_A           79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-TESHLVAESVIFTLLSERHL-G---PKLYGIFSG----GR  149 (429)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-CHHHHHHHHHHHHHHHHTTS-S---SCEEEEETT----EE
T ss_pred             EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC-cHHHHHHHHHHHHHHHhCCC-C---CcEEEEeCC----CE
Confidence            567778889999997643       25789999984321 11344578898888876542 2   333443332    37


Q ss_pred             EEeCC
Q 017021          122 VFEKL  126 (379)
Q Consensus       122 v~e~~  126 (379)
                      |++|+
T Consensus       150 v~e~l  154 (429)
T 1nw1_A          150 LEEYI  154 (429)
T ss_dssp             EECCC
T ss_pred             EEEEe
Confidence            88988

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=91.85  E-value=0.43  Score=44.95  Aligned_cols=73  Identities=14%  Similarity=0.095  Sum_probs=44.8

Q ss_pred             hccccccceeEEEEEecCC-------CceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           49 SKMGEGTFGQVLECWDRER-------KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~-------~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      +.+..|-...+|++.....       ++.+++|+............+|..++..+..... .|   ++++.+  .+  ++
T Consensus        76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi-~P---~l~~~~--~~--~~  147 (424)
T 3mes_A           76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINI-AP---NIIADF--PE--GR  147 (424)
T ss_dssp             EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTS-SC---CEEEEE--TT--EE
T ss_pred             EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCC-CC---CEEEEc--CC--CE
Confidence            4566677888999876521       5779999975332222233568888888876543 23   333322  22  68


Q ss_pred             EEeCC-CCC
Q 017021          122 VFEKL-GSS  129 (379)
Q Consensus       122 v~e~~-~~s  129 (379)
                      |++|+ |.+
T Consensus       148 I~efI~G~~  156 (424)
T 3mes_A          148 IEEFIDGEP  156 (424)
T ss_dssp             EEECCCSEE
T ss_pred             EEEEeCCcc
Confidence            89999 533

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=89.70  E-value=1.1  Score=41.83  Aligned_cols=34  Identities=24%  Similarity=0.431  Sum_probs=25.1

Q ss_pred             CcccCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCccc
Q 017021          166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT  220 (379)
Q Consensus       166 iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~  220 (379)
                      ++|+|+.+.||++.+...                     .+....+.++||..|.
T Consensus       246 fcHnDl~~gNil~~~~~~---------------------~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRE---------------------NSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EECSCCCGGGEEEETTGG---------------------GCSSCCEEECCCTTCE
T ss_pred             eEEecCCCCeEEEecCcc---------------------cCcCCeEEEechHhcc
Confidence            689999999999954210                     0345678999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	379
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-52
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-50
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-49
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-49
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-48
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	7e-48
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-47
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	6e-47
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	8e-47
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-46
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-46
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	5e-46
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	9e-46
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-45
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-45
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-44
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-43
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-42
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-42
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-42
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-42
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-42
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-42
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	9e-41
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-40
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-39
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	9e-39
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-38
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	6e-38
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	8e-38
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	9e-38
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-36
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	7e-35
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-34
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-34
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-34
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-33
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	9e-32
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-31
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-31
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	7e-31
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-30
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	9e-29
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-28
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-28
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	8e-28
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-27
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	6e-27
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-27
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	7e-27
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	9e-27
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-26
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-26
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	7e-26
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-25
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-24
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-24
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	7e-24
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-23
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-23
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-23
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-21
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-12
d1nw1a_	395	d.144.1.8 (A:) Choline kinase {Caenorhabditis eleg	3e-05

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (445), Expect = 1e-52
 Identities = 66/334 (19%), Positives = 116/334 (34%), Gaps = 44/334 (13%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGG 103
           +  S++G G  G V +   +    ++A K++        R   + E++VL +        
Sbjct: 9   EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSP--- 64

Query: 104 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
              V     F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ 
Sbjct: 65  -YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLR 121

Query: 163 DLC-MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 220
           +   ++H D+KP N+L+ S                              IK+ DFG S  
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGE---------------------------IKLCDFGVSGQ 154

Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                 N  V TR Y +PE + G  ++   DIWS+G  LVE+  G       +  E   M
Sbjct: 155 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
               +         R           G    P  A        V + P            
Sbjct: 215 FGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPK-----LPSGV 269

Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
            + +    +   L  +P +R   ++ + H F  R
Sbjct: 270 FSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  170 bits (432), Expect = 2e-50
 Identities = 70/335 (20%), Positives = 127/335 (37%), Gaps = 80/335 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHDKGGN 104
            I  ++G G FG V  C ++    +   K +       +     EI ++ QL  H     
Sbjct: 32  DILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHP---- 86

Query: 105 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
           + + + + F+ +  + ++ E L G  L+D +   +Y+      V    RQ  E +  MH+
Sbjct: 87  KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMHE 145

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             ++H D+KPEN++                             K+S++K+IDFG  T   
Sbjct: 146 HSIVHLDIKPENIMC-------------------------ETKKASSVKIIDFGLATKLN 180

Query: 224 PDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
           PD+      +T  + APE++      +  D+W++G +   L +G + F   ++LE L  +
Sbjct: 181 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV 240

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
           +R      +     V   A+                                        
Sbjct: 241 KRCDWEFDEDAFSSVSPEAK---------------------------------------- 260

Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                  ++ LL+ +P  RLT  +AL HP+   DH
Sbjct: 261 -----DFIKNLLQKEPRKRLTVHDALEHPWLKGDH 290

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  167 bits (424), Expect = 3e-49
 Identities = 74/336 (22%), Positives = 126/336 (37%), Gaps = 80/336 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHDKGGN 104
            IH ++G G FG V    +R      A K V    +  +E    EI+ +  L +H     
Sbjct: 29  DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHP---- 83

Query: 105 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             V + + F+  N + +++E + G  L++ +   + +    D   E  RQ+ + +  MH+
Sbjct: 84  TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMHE 142

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              +H DLKPEN++  +                          +S+ +K+IDFG T +  
Sbjct: 143 NNYVHLDLKPENIMFTT-------------------------KRSNELKLIDFGLTAHLD 177

Query: 224 PDQNYIVST--RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
           P Q+  V+T    + APEV  G    Y  D+WSVG +   L +G + F    + E L  +
Sbjct: 178 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 237

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
           +     +       +                                             
Sbjct: 238 KSCDWNMDDSAFSGISE------------------------------------------- 254

Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
             D    ++ LL  DP  R+T  +AL HP+ T  + 
Sbjct: 255 --DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 288

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (422), Expect = 4e-49
 Identities = 71/332 (21%), Positives = 132/332 (39%), Gaps = 80/332 (24%)

Query: 52  GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN 111
           G G  G+VL+ +++  +E  A+K+++   K R     E+E+  + ++        V+I +
Sbjct: 21  GLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCP----HIVRIVD 72

Query: 112 WFDY----RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 166
            ++     R  + IV E L G  L+  ++    ++F      EI + + E I ++H + +
Sbjct: 73  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 132

Query: 167 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 226
            H D+KPEN+L  S                           ++ +K+ DFG         
Sbjct: 133 AHRDVKPENLLYTS------------------------KRPNAILKLTDFGFAKETTSHN 168

Query: 227 NY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
           +      T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L     M+  
Sbjct: 169 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT- 227

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
                              +R G+ ++P    S  S                       +
Sbjct: 228 ------------------RIRMGQYEFPNPEWSEVS----------------------EE 247

Query: 345 LTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
           +  L++ LL+ +PT R+T  E + HP+  +  
Sbjct: 248 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 279

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (415), Expect = 2e-48
 Identities = 75/339 (22%), Positives = 144/339 (42%), Gaps = 45/339 (13%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKG 102
           +  +K+G+GTFG+V +   R+  + VA+K V      + +   A+ EI++LQ L   +  
Sbjct: 13  EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVV 72

Query: 103 GNRCV---QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
               +   +   +   +  I +VF+     L   L  N    F +  ++ + + LL  + 
Sbjct: 73  NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG-LLSNVLVKFTLSEIKRVMQMLLNGLY 131

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   ++H D+K  NVL+     +K+ D+  +                   +       
Sbjct: 132 YIHRNKILHRDMKAANVLITRDGVLKLADFGLA-------------------RAFSLAKN 172

Query: 220 TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
           +      N  V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +     L
Sbjct: 173 SQPNRYTNR-VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 231

Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
           A++ ++ G +   +   VD +  +   +  L   +    ++ +K+ ++ P   +LI +  
Sbjct: 232 ALISQLCGSITPEVWPNVDNY--ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDK-- 287

Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
                        LL  DP  R+ + +AL H FF  D +
Sbjct: 288 -------------LLVLDPAQRIDSDDALNHDFFWSDPM 313

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  164 bits (415), Expect = 7e-48
 Identities = 101/345 (29%), Positives = 159/345 (46%), Gaps = 45/345 (13%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK---- 101
            +  K+G G F  V    D      VA+KIVRG K Y EAA  EI++LQ++   D     
Sbjct: 16  ILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKED 75

Query: 102 --GGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 155
             G N  +++ + F+++     H+ +VFE LG +L   ++K  +R  P+  V++I++QLL
Sbjct: 76  SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLL 135

Query: 156 ECIAFMHDLCMI-HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
             + +MH  C I HTD+KPENVL+   +                            IK+ 
Sbjct: 136 LGLDYMHRRCGIIHTDIKPENVLMEIVDS---------------------PENLIQIKIA 174

Query: 215 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE- 273
           D G+  +        + TR YR+PEV+LG  W    DIWS  C++ EL TG+ LF+  E 
Sbjct: 175 DLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEG 234

Query: 274 -----NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 328
                + +H+A +  +LG LP ++L+        +  RG L          S      L 
Sbjct: 235 HSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLR-------NISKLKFWPLE 287

Query: 329 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
            +     +     A +++  L  +L+ DP  R  A   + HP+  
Sbjct: 288 DVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK 332

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (412), Expect = 1e-47
 Identities = 82/334 (24%), Positives = 138/334 (41%), Gaps = 45/334 (13%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGG 103
              S +GEG +G V   +D   K  VAIK +   +   Y +  + EI++L +    +  G
Sbjct: 11  TNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 70

Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
              +      +    + +V   +G+ LY  L+    +    D +     Q+L  + ++H 
Sbjct: 71  INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHS 127

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             ++H DLKP N+LL ++  +K+ D+  +     D  +   +                  
Sbjct: 128 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL------------------ 169

Query: 224 PDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
                 V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+ L  + 
Sbjct: 170 ---TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 226

Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
            +LG   Q  L  +        R   L  P             K     N +  + D  A
Sbjct: 227 GILGSPSQEDLNCIIN---LKARNYLLSLPH------------KNKVPWNRLFPNADSKA 271

Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
            D   LL  +L ++P  R+   +AL HP+  + +
Sbjct: 272 LD---LLDKMLTFNPHKRIEVEQALAHPYLEQYY 302

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  160 bits (404), Expect = 6e-47
 Identities = 82/334 (24%), Positives = 138/334 (41%), Gaps = 54/334 (16%)

Query: 46  KIHSKMGEGTFGQVLECWDRE-RKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDK 101
           +  +++GEG +G+V +  D +     VA+K VR   G +    + + E+ VL+ L   + 
Sbjct: 10  ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 69

Query: 102 GGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
                   V   +  D    + +VFE +   L  +L K      P + ++++  QLL  +
Sbjct: 70  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 129

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            F+H   ++H DLKP+N+L+ SS  IK+ D                              
Sbjct: 130 DFLHSHRVVHRDLKPQNILVTSSGQIKLAD-------------------------FGLAR 164

Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
               +     +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF+   +++ L
Sbjct: 165 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 224

Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
             +  V+G   +                   DWP   A             ++  +   +
Sbjct: 225 GKILDVIGLPGEE------------------DWPRDVALPRQAFHSKSAQPIEKFV-TDI 265

Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
           D    D   LL   L ++P  R++A  AL HP+F
Sbjct: 266 DELGKD---LLLKCLTFNPAKRISAYSALSHPYF 296

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (401), Expect = 8e-47
 Identities = 62/331 (18%), Positives = 120/331 (36%), Gaps = 79/331 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           +I   +G+G FG V    +++ K ++A+K++   +  +     ++    ++  H +  N 
Sbjct: 9   EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN- 67

Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            +++  +F     + ++ E     ++Y  L+K     F          +L   +++ H  
Sbjct: 68  ILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSK 125

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +IH D+KPEN+LL S+  +K+ D+  S+H P                            
Sbjct: 126 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----------------------- 162

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
               +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    + RV
Sbjct: 163 ---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 219

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
               P  + +                                                  
Sbjct: 220 EFTFPDFVTE-------------------------------------------------G 230

Query: 345 LTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
              L+  LL+++P+ R   RE L HP+ T +
Sbjct: 231 ARDLISRLLKHNPSQRPMLREVLEHPWITAN 261

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (400), Expect = 2e-46
 Identities = 73/335 (21%), Positives = 138/335 (41%), Gaps = 58/335 (17%)

Query: 50  KMGEGTFGQVLECWDRERKEMVAIKIVRGIKK------YREAAMIEIEVLQQLAKHDKGG 103
            +GEG F  V +  D+   ++VAIK ++   +          A+ EI++LQ+L  H    
Sbjct: 5   FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHP--- 60

Query: 104 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
              + + + F ++++I +VF+ + + L   ++ N+    P   ++      L+ + ++H 
Sbjct: 61  -NIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTP-SHIKAYMLMTLQGLEYLHQ 118

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             ++H DLKP N+LL  +  +K+ D+  +      +  +                     
Sbjct: 119 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--------------------- 157

Query: 224 PDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
               + V TR YRAPE++ G   +    D+W+VGCIL EL           +L+ L  + 
Sbjct: 158 ---THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIF 214

Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
             LG   +                    WP+  +  + +          + I        
Sbjct: 215 ETLGTPTEE------------------QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDL 256

Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 377
            DL   +QGL  ++P  R+TA +AL+  +F+    
Sbjct: 257 LDL---IQGLFLFNPCARITATQALKMKYFSNRPG 288

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (399), Expect = 3e-46
 Identities = 89/331 (26%), Positives = 145/331 (43%), Gaps = 53/331 (16%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKG 102
           +   K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +  
Sbjct: 5   QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-- 62

Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
               V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H
Sbjct: 63  ---IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              ++H DLKP+N+L+ +   IK+ D+  +         +                    
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-------------------- 159

Query: 223 RPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
                + V T  YRAPE++LG   ++   DIWS+GCI  E+ T  ALF     ++ L  +
Sbjct: 160 ----THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            R LG   + +                  WP   +  +   S  K  R      + V   
Sbjct: 216 FRTLGTPDEVV------------------WPGVTSMPDYKPSFPKWARQD--FSKVVPPL 255

Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 256 DEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  159 bits (402), Expect = 5e-46
 Identities = 80/342 (23%), Positives = 145/342 (42%), Gaps = 65/342 (19%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
                +G G+FG V +    +  E+VAIK V   K+++     E++++++L  H      
Sbjct: 23  TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-DHC----N 74

Query: 106 CVQIRNWF------DYRNHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLEC 157
            V++R +F          ++ +V + +  ++Y   R      ++ P+  V+    QL   
Sbjct: 75  IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           +A++H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 168

Query: 218 STTYERPDQNY--IVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           S       +     + +R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     
Sbjct: 169 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228

Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           ++ L  + +VLG   +  ++ ++ +  ++       +P+           +K      + 
Sbjct: 229 VDQLVEIIKVLGTPTREQIREMNPNYTEF------KFPQ-----------IKAHPWTKVF 271

Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                  A     L   LL Y PT RLT  EA  H FF    
Sbjct: 272 RPRTPPEAIA---LCSRLLEYTPTARLTPLEACAHSFFDELR 310

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  156 bits (395), Expect = 9e-46
 Identities = 68/340 (20%), Positives = 117/340 (34%), Gaps = 81/340 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----------GIKKYREAAMIEIEVLQQ 95
           +    +G G    V  C  +   +  A+KI+            +++ REA + E+++L++
Sbjct: 6   EPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRK 65

Query: 96  LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 154
           ++ H       +Q+++ ++      +VF+ +    L+D+L +    +      R+I R L
Sbjct: 66  VSGHP----NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRAL 119

Query: 155 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 214
           LE I  +H L ++H DLKPEN+LL     IK+ D+  S                     +
Sbjct: 120 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-------------------CQL 160

Query: 215 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
           D G    E       ++             G+    D+WS G I+  L  G   F   + 
Sbjct: 161 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ 220

Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
           +  L M+                                                     
Sbjct: 221 MLMLRMIMSGNYQFGSPEWDDYSD------------------------------------ 244

Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 374
                     +  L+   L   P  R TA EAL HPFF +
Sbjct: 245 ---------TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (396), Expect = 2e-45
 Identities = 58/336 (17%), Positives = 113/336 (33%), Gaps = 79/336 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
            I   +G G FG V  C +   K+    K V+     +     EI +L    +H      
Sbjct: 8   MIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-RHR----N 62

Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            + +   F+    + ++FE + G  +++ +  + +       +     Q+ E + F+H  
Sbjct: 63  ILHLHESFESMEELVMIFEFISGLDIFERINTSAFE-LNEREIVSYVHQVCEALQFLHSH 121

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            + H D++PEN++  +     +                         K+I+FG     +P
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTI-------------------------KIIEFGQARQLKP 156

Query: 225 DQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 282
             N+  + +   Y APEV      +   D+WS+G ++  L +G   F    N + +  + 
Sbjct: 157 GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM 216

Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 342
                  +   K +                                              
Sbjct: 217 NAEYTFDEEAFKEISI-------------------------------------------- 232

Query: 343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 378
            +    +  LL  +   R+TA EAL+HP+  +   R
Sbjct: 233 -EAMDFVDRLLVKERKSRMTASEALQHPWLKQKIER 267

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  154 bits (391), Expect = 4e-45
 Identities = 66/336 (19%), Positives = 122/336 (36%), Gaps = 81/336 (24%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHDKGGN 104
           +I  ++G+G FG+V +  ++E   + A K++    ++  E  M+EI++L     H     
Sbjct: 15  EIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC-DHPN--- 70

Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
             V++ + F Y N++ I+ E       D +     R      ++ + +Q L+ + ++HD 
Sbjct: 71  -IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 129

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +IH DLK  N+L      IK+ D+  S    +                           
Sbjct: 130 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR---------------------- 167

Query: 225 DQNYIVSTRHYRAPEVILGL-----GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 279
             +  + T ++ APEV++        + Y  D+WS+G  L+E+   E        +  L 
Sbjct: 168 --DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 225

Query: 280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 339
            + +   P                     L  P   +S                      
Sbjct: 226 KIAKSEPP--------------------TLAQPSRWSS---------------------- 243

Query: 340 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
               +    L+  L  +   R T  + L+HPF T D
Sbjct: 244 ----NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 275

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  154 bits (390), Expect = 1e-44
 Identities = 70/335 (20%), Positives = 137/335 (40%), Gaps = 56/335 (16%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++  K+G G + +V E  +    E V +KI++     ++    EI++L+ L         
Sbjct: 38  QLVRKLGRGKYSEVFEAINITNNEKVVVKILK--PVKKKKIKREIKILENLRGGP----N 91

Query: 106 CVQIRNWF--DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
            + + +           +VFE +  +      +           +R    ++L+ + + H
Sbjct: 92  IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCH 146

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
            + ++H D+KP NV++                            +   +++ID+G   + 
Sbjct: 147 SMGIMHRDVKPHNVMIDH--------------------------EHRKLRLIDWGLAEFY 180

Query: 223 RPDQ--NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGE-ALFQTHENLEHL 278
            P Q  N  V++R+++ PE+++    + Y  D+WS+GC+L  +   +   F  H+N + L
Sbjct: 181 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 240

Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
             + +VLG                Y+ +  ++            S  +  R  +   QH+
Sbjct: 241 VRIAKVLGT----------EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHL 290

Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 373
                +    L  LLRYD   RLTAREA+ HP+F 
Sbjct: 291 VSP--EALDFLDKLLRYDHQSRLTAREAMEHPYFY 323

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  150 bits (381), Expect = 2e-43
 Identities = 65/335 (19%), Positives = 120/335 (35%), Gaps = 81/335 (24%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGG 103
                +G G F +V+   D+  +++VAIK +    ++    +   EI VL ++ KH    
Sbjct: 12  DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI-KHP--- 67

Query: 104 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
              V + + ++   H+ ++ + + G  L+D + +  +  +       +  Q+L+ + ++H
Sbjct: 68  -NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYLH 124

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
           DL ++H DLKPEN+L  S                        + + S I + DFG +  E
Sbjct: 125 DLGIVHRDLKPENLLYYS------------------------LDEDSKIMISDFGLSKME 160

Query: 223 RPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
            P         T  Y APEV+    ++   D WS+G I   L  G   F    + +    
Sbjct: 161 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 220

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
           + +            +                                            
Sbjct: 221 ILKAEYEFDSPYWDDISD------------------------------------------ 238

Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                   ++ L+  DP  R T  +AL+HP+   D
Sbjct: 239 ---SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 270

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (372), Expect = 2e-42
 Identities = 59/334 (17%), Positives = 112/334 (33%), Gaps = 79/334 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGG 103
            +   +GEG +G+V    +R  +E VA+KIV         E    EI + + L  H+   
Sbjct: 8   DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHE--- 63

Query: 104 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
              V+        N   +  E   G  L+D +  +     P    +    QL+  + ++H
Sbjct: 64  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH 120

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
            + + H D+KPEN+LL   + +K+ D+  +     ++                       
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN----------------------R 158

Query: 223 RPDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
               N +  T  Y APE++    +   P D+WS G +L  +  GE  +    +       
Sbjct: 159 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YS 217

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
           +        +  K++D                                            
Sbjct: 218 DWKEKKTYLNPWKKIDSAPL---------------------------------------- 237

Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 375
                 LL  +L  +P+ R+T  +  +  ++ + 
Sbjct: 238 -----ALLHKILVENPSARITIPDIKKDRWYNKP 266

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (376), Expect = 2e-42
 Identities = 81/336 (24%), Positives = 140/336 (41%), Gaps = 53/336 (15%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLA-KHDK 101
           +    +G G +G V    D      VAIK +      + + + A  E+ +L+ +  ++  
Sbjct: 21  RDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVI 80

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           G           D      +V   +G+ L   ++         D ++ +  Q+L+ + ++
Sbjct: 81  GLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYI 137

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH DLKP N+ +                            +   +K++DFG    
Sbjct: 138 HAAGIIHRDLKPGNLAV---------------------------NEDCELKILDFGLARQ 170

Query: 222 ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
              +    V TR YRAPEVIL  + +T   DIWSVGCI+ E+ TG+ LF+  ++L+ L  
Sbjct: 171 ADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKE 230

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
           + +V G  P   ++R+     K   +G  +  +   +                I+ +   
Sbjct: 231 IMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFAS---------------ILTNASP 275

Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
            A +   LL+ +L  D   R+TA EAL HP+F   H
Sbjct: 276 LAVN---LLEKMLVLDAEQRVTAGEALAHPYFESLH 308

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (376), Expect = 2e-42
 Identities = 73/335 (21%), Positives = 129/335 (38%), Gaps = 40/335 (11%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKG 102
           +    +G G  G V   +D      VAIK +      + + + A  E+ +++ +   +  
Sbjct: 20  QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 79

Query: 103 GNR-CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
                   +   +    + +V E + ++L   ++         + +  +  Q+L  I  +
Sbjct: 80  SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 135

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH DLKP N+++ S   +K+ D                              T  
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDCTLKILD-------------------------FGLARTAG 170

Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
                   V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    +
Sbjct: 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 230

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
              LG      +K++      YV       P+ A           L    +   +     
Sbjct: 231 IEQLGTPCPEFMKKLQPTVRNYVEN----RPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 286

Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
           A D   LL  +L  DP  R++  +AL+HP+    +
Sbjct: 287 ARD---LLSKMLVIDPAKRISVDDALQHPYINVWY 318

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (376), Expect = 3e-42
 Identities = 75/336 (22%), Positives = 143/336 (42%), Gaps = 53/336 (15%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLA-KHDK 101
           +  S +G G +G V   +D +    VA+K +        + +    E+ +L+ +  ++  
Sbjct: 21  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
           G           +  N + +V   +G+ L + ++    +    D V+ +  Q+L  + ++
Sbjct: 81  GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYI 137

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +IH DLKP N+                            + +   +K++DFG   +
Sbjct: 138 HSADIIHRDLKPSNLA---------------------------VNEDCELKILDFGLARH 170

Query: 222 ERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
              +    V+TR YRAPE++L    +    DIWSVGCI+ EL TG  LF   ++++ L +
Sbjct: 171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
           + R++G     +LK++   + +   +     P+   +                +    + 
Sbjct: 231 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFAN---------------VFIGANP 275

Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
            A D   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 276 LAVD---LLEKMLVLDSDKRITAAQALAHAYFAQYH 308

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  147 bits (373), Expect = 3e-42
 Identities = 68/338 (20%), Positives = 115/338 (34%), Gaps = 88/338 (26%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHDK 101
               ++G G+FG V    D    E+VAIK +        +  +  + E+  LQ+L +H  
Sbjct: 18  SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHP- 75

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
                +Q R  +   +   +V E    S  D L  +  +      +  +    L+ +A++
Sbjct: 76  ---NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYL 131

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   MIH D+K  N+LL                                +K+ DFGS + 
Sbjct: 132 HSHNMIHRDVKAGNILLSEPGL---------------------------VKLGDFGSASI 164

Query: 222 ERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
             P  ++ V T ++ APEVIL +    +    D+WS+G   +EL   +        +  L
Sbjct: 165 MAPANSF-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL 223

Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
             + +   P  Q                    W E                         
Sbjct: 224 YHIAQNESPALQSG-----------------HWSE------------------------- 241

Query: 339 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                   + +   L+  P DR T+   L+H F  R+ 
Sbjct: 242 -----YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (371), Expect = 4e-42
 Identities = 66/333 (19%), Positives = 115/333 (34%), Gaps = 80/333 (24%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGN 104
               K+G+G  G V    D    + VAI+ +   +   +E  + EI V+++  K+     
Sbjct: 23  TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNP---- 77

Query: 105 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
             V   + +   + + +V E L G SL D + +          +  + R+ L+ + F+H 
Sbjct: 78  NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHS 134

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
             +IH D+K +N+LL     +K+ D+        + S    M                  
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM------------------ 176

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
                 V T ++ APEV+    +    DIWS+G + +E+  GE  +     L  L ++  
Sbjct: 177 ------VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT 230

Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
              P                     L  PE  ++                          
Sbjct: 231 NGTP--------------------ELQNPEKLSA-------------------------- 244

Query: 344 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
                L   L  D   R +A+E L+H F     
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAK 277

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (360), Expect = 9e-41
 Identities = 60/338 (17%), Positives = 123/338 (36%), Gaps = 91/338 (26%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKG 102
           K   ++G G+F  V +  D E    VA   ++     K  R+    E E+L+ L +H   
Sbjct: 12  KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHP-- 68

Query: 103 GNRCVQIRNWF----DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
               V+  + +      +  I +V E +   +L  +L++   +   I ++R   RQ+L+ 
Sbjct: 69  --NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKG 124

Query: 158 IAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 215
           + F+H     +IH DLK +N+ +                             + ++K+ D
Sbjct: 125 LQFLHTRTPPIIHRDLKCDNIFITG--------------------------PTGSVKIGD 158

Query: 216 FGSTTYERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
            G  T +R      ++ T  + APE+     +    D+++ G  ++E+ T E  +   +N
Sbjct: 159 LGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN 217

Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
              +                   R     V+    D                        
Sbjct: 218 AAQIY------------------RRVTSGVKPASFD------------------------ 235

Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                 +  ++  +++G +R +  +R + ++ L H FF
Sbjct: 236 ----KVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 269

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (359), Expect = 2e-40
 Identities = 66/337 (19%), Positives = 119/337 (35%), Gaps = 85/337 (25%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-------KYREAAMIEIEVLQQLAK 98
               ++G G F  V +C ++      A K ++  +         RE    E+ +L+++ +
Sbjct: 13  DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-Q 71

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
           H       + +   ++ +  + ++ E + G  L+DFL +    S   +   E  +Q+L  
Sbjct: 72  HP----NVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNG 125

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + ++H L + H DLKPEN++L+                        R      IK+IDFG
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLD-----------------------RNVPKPRIKIIDFG 162

Query: 218 STTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
                        I  T  + APE++         D+WS+G I   L +G + F      
Sbjct: 163 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 222

Query: 276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 335
           E LA +  V               A+                                  
Sbjct: 223 ETLANVSAVNYEFEDEYFSNTSALAK---------------------------------- 248

Query: 336 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                        ++ LL  DP  R+T +++L+HP+ 
Sbjct: 249 -----------DFIRRLLVKDPKKRMTIQDSLQHPWI 274

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (354), Expect = 1e-39
 Identities = 61/334 (18%), Positives = 109/334 (32%), Gaps = 81/334 (24%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K    +GEG+F  V+   +       AIKI+      +E  +  +   + +         
Sbjct: 11  KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF- 69

Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++   F     +           L  ++RK    SF     R    +++  + ++H  
Sbjct: 70  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 127

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
            +IH DLKPEN+LL    +I++ D+ ++     +S   +                     
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-------------------- 167

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
             N  V T  Y +PE++         D+W++GCI+ +L  G   F+          + ++
Sbjct: 168 --NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 225

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
               P+                    +P+                               
Sbjct: 226 EYDFPEKF------------------FPK------------------------------- 236

Query: 345 LTHLLQGLLRYDPTDRLTAREA------LRHPFF 372
              L++ LL  D T RL   E         HPFF
Sbjct: 237 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 270

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (350), Expect = 9e-39
 Identities = 63/333 (18%), Positives = 112/333 (33%), Gaps = 85/333 (25%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHDK 101
            +H  +G+G+FG+V     ++  +  AIK ++     +    E  M+E  VL    +H  
Sbjct: 5   ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP- 63

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                  +   F  + ++  V E L G  L   ++      F +      A +++  + F
Sbjct: 64  ---FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQF 118

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   +++ DLK +N+LL    +IK+ D+          +                    
Sbjct: 119 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT------------------ 160

Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                 N    T  Y APE++LG  + +  D WS G +L E+  G++ F   +  E    
Sbjct: 161 ------NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF-- 212

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
                                  +R     +P                            
Sbjct: 213 ---------------------HSIRMDNPFYPRWLEK----------------------- 228

Query: 341 SAGDLTHLLQGLLRYDPTDRLTAR-EALRHPFF 372
              +   LL  L   +P  RL  R +  +HP F
Sbjct: 229 ---EAKDLLVKLFVREPEKRLGVRGDIRQHPLF 258

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  136 bits (344), Expect = 3e-38
 Identities = 79/331 (23%), Positives = 130/331 (39%), Gaps = 55/331 (16%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKG 102
               K+GEGT+G V +  +    E  A+K +R  K         + EI +L++L   +  
Sbjct: 5   HGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSN-- 61

Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
               V++ +    +  + +VFE L   L   L             +    QLL  IA+ H
Sbjct: 62  ---IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCH 117

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
           D  ++H DLKP+N+L+     +K+ D+  +         +                    
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY-------------------- 157

Query: 223 RPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
                + + T  YRAP+V++G   ++   DIWSVGCI  E+  G  LF      + L  +
Sbjct: 158 ----THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI 213

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
            R+LG         V                     +      +  P      ++ +D S
Sbjct: 214 FRILGTPNSKNWPNVTELP-----------------KYDPNFTVYEPLPWESFLKGLDES 256

Query: 342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
             DL   L  +L+ DP  R+TA++AL H +F
Sbjct: 257 GIDL---LSKMLKLDPNQRITAKQALEHAYF 284

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (341), Expect = 6e-38
 Identities = 61/336 (18%), Positives = 112/336 (33%), Gaps = 93/336 (27%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-------GIKKYREAAMIEIEVLQQLAK 98
           ++   +G G FG V           VAIK V        G         +E+ +L++++ 
Sbjct: 7   QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
              G    +++ +WF+  +   ++ E+       F       +   +L R    Q+LE +
Sbjct: 67  GFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 217
              H+  ++H D+K EN+L+  +                             +K+IDFG 
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGE--------------------------LKLIDFGS 157

Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLE 276
               +         TR Y  PE I           +WS+G +L ++  G+  F+  E   
Sbjct: 158 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-- 215

Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
                                      + RG++ + +  +S                   
Sbjct: 216 ---------------------------IIRGQVFFRQRVSS------------------- 229

Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 372
                  +  HL++  L   P+DR T  E   HP+ 
Sbjct: 230 -------ECQHLIRWCLALRPSDRPTFEEIQNHPWM 258

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (341), Expect = 8e-38
 Identities = 80/336 (23%), Positives = 141/336 (41%), Gaps = 55/336 (16%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKG 102
           +   K+GEGT+G V +  +RE  E+VA+K VR     +    +A+ EI +L++L   +  
Sbjct: 5   EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN-- 62

Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
               V++ +       + +VFE     L  +    N    P ++V+    QLL+ + F H
Sbjct: 63  ---IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGFCH 118

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 222
              ++H DLKP+N+L+  +  +K+ ++  +         +                    
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY-------------------- 158

Query: 223 RPDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEA-LFQTHENLEHLAM 280
               +  V T  YR P+V+ G    +   D+WS GCI  EL      LF  ++  + L  
Sbjct: 159 ----SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR 214

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
           + R+LG   +     + +  +                    K     P   +L+      
Sbjct: 215 IFRLLGTPTEEQWPSMTKLPD-------------------YKPYPMYPATTSLVNVVPKL 255

Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 376
           +A     LLQ LL+ +P  R++A EAL+HP+F+   
Sbjct: 256 NA-TGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (340), Expect = 9e-38
 Identities = 61/342 (17%), Positives = 110/342 (32%), Gaps = 96/342 (28%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKG 102
           ++   +G G++G+  +   +   +++  K +      +  ++  + E+ +L++L KH   
Sbjct: 7   EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPN- 64

Query: 103 GNRCVQIRNWFDYR--NHICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLEC 157
               V+  +    R    + IV E   G  L   + K     +    + V  +  QL   
Sbjct: 65  ---IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 121

Query: 158 IAFMHDL-----CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 212
           +   H        ++H DLKP NV L   +                            +K
Sbjct: 122 LKECHRRSDGGHTVLHRDLKPANVFLDGKQN---------------------------VK 154

Query: 213 VIDFGSTTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
           + DFG       D ++    V T +Y +PE +  + +    DIWS+GC+L ELC     F
Sbjct: 155 LGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 214

Query: 270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 329
                 E                           +R G+        S E          
Sbjct: 215 TAFSQKELAGK-----------------------IREGKFRRIPYRYSDE---------- 241

Query: 330 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 371
                          L  ++  +L      R +  E L +P 
Sbjct: 242 ---------------LNEIITRMLNLKDYHRPSVEEILENPL 268

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  133 bits (334), Expect = 1e-36
 Identities = 58/334 (17%), Positives = 106/334 (31%), Gaps = 64/334 (19%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++  K+G G+FG +    D    E VAIK+   +K       IE ++ + +         
Sbjct: 10  RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLEC-VKTKHPQLHIESKIYKMMQGG----VG 64

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
              IR      ++  +V E LG SL D     + R F +  V  +A Q++  I ++H   
Sbjct: 65  IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKN 123

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
            IH D+KP+N L+   +   +           D    K+   +   + I +         
Sbjct: 124 FIHRDVKPDNFLMGLGKKGNLVYII-------DFGLAKKYRDARTHQHIPYRENKN---- 172

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
              +  T  Y +    LG+  +   D+ S+G +L+    G   +Q  +        ER  
Sbjct: 173 ---LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYER-- 227

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                                                  +   ++   I         + 
Sbjct: 228 ---------------------------------------ISEKKMSTPIEVLCKGYPSEF 248

Query: 346 THLLQGLLRYDPTDRLTA---REALRHPFFTRDH 376
              L         D+      R+  R+ F  +  
Sbjct: 249 ATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 282

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  128 bits (322), Expect = 7e-35
 Identities = 62/336 (18%), Positives = 109/336 (32%), Gaps = 91/336 (27%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHDK 101
           +I   +G G+FG+V     R      A+K+++       K  E    E  +L  +  H  
Sbjct: 7   QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THP- 64

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
                +++   F     I ++ + +       L + + R FP  + +  A ++   + ++
Sbjct: 65  ---FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEYL 120

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H   +I+ DLKPEN+LL  + +                           IK+ DFG   Y
Sbjct: 121 HSKDIIYRDLKPENILLDKNGH---------------------------IKITDFGFAKY 153

Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
                  +  T  Y APEV+    +    D WS G ++ E+  G   F            
Sbjct: 154 VPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY----------- 202

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
                       ++        +    L +P                             
Sbjct: 203 ----DSNTMKTYEK--------ILNAELRFPPFFNE------------------------ 226

Query: 342 AGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
             D+  LL  L+  D + RL        +   HP+F
Sbjct: 227 --DVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 260

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  126 bits (318), Expect = 1e-34
 Identities = 49/250 (19%), Positives = 91/250 (36%), Gaps = 38/250 (15%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++GEG+FG + E  +    + VAIK     +        E    + LA        
Sbjct: 8   KVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEP-RRSDAPQLRDEYRTYKLLAGC----TG 62

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
              +  +     H  +V + LG SL D L     R F +  V   A+Q+L  +  +H+  
Sbjct: 63  IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKS 121

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-------- 217
           +++ D+KP+N L+                             ++ I V+DFG        
Sbjct: 122 LVYRDIKPDNFLIGR----------------------PNSKNANMIYVVDFGMVKFYRDP 159

Query: 218 --STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 275
                    ++  +  T  Y +    LG   +   D+ ++G + +    G   +Q  +  
Sbjct: 160 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA 219

Query: 276 EHLAMMERVL 285
            +    ER+ 
Sbjct: 220 TNKQKYERIG 229

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  128 bits (322), Expect = 2e-34
 Identities = 67/339 (19%), Positives = 127/339 (37%), Gaps = 89/339 (26%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHDK 101
            +H  +G G FG+V  C   +  +M A+K +      +K+    A+ E  +L  ++  D 
Sbjct: 7   SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC 66

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                V +   F   + +  + + + G  L+  L ++    F    +R  A +++  +  
Sbjct: 67  --PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEH 122

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 219
           MH+  +++ DLKP N+LL    +                           +++ D G + 
Sbjct: 123 MHNRFVVYRDLKPANILLDEHGH---------------------------VRISDLGLAC 155

Query: 220 TYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 278
            + +   +  V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+  +  
Sbjct: 156 DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH 215

Query: 279 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 338
            +    L                       ++ P+  +                      
Sbjct: 216 EIDRMTLTM--------------------AVELPDSFSP--------------------- 234

Query: 339 DHSAGDLTHLLQGLLRYDPTDRLT-----AREALRHPFF 372
                +L  LL+GLL+ D   RL      A+E    PFF
Sbjct: 235 -----ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 268

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (318), Expect = 5e-34
 Identities = 62/337 (18%), Positives = 112/337 (33%), Gaps = 90/337 (26%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHDK 101
                +G+GTFG+V+   ++      A+KI+R      K      + E  VLQ   +H  
Sbjct: 8   DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RH-- 64

Query: 102 GGNRCVQIRNWFDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                  ++  F   + +C V E   G  L+  L +     F  +  R    +++  + +
Sbjct: 65  --PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEY 120

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +H   +++ D+K EN++L    +IK+ D+        D +                    
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM------------------ 162

Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                      T  Y APEV+    +    D W +G ++ E+  G   F   ++     +
Sbjct: 163 ------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
                                  +    + +P   +                        
Sbjct: 217 -----------------------ILMEEIRFPRTLSP----------------------- 230

Query: 341 SAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
              +   LL GLL+ DP  RL      A+E + H FF
Sbjct: 231 ---EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (308), Expect = 2e-33
 Identities = 57/326 (17%), Positives = 108/326 (33%), Gaps = 84/326 (25%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+   +G+G FG V+    R  K  VA+K ++      +A + E  V+ QL +H      
Sbjct: 10  KLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKN-DATAQAFLAEASVMTQL-RHS----N 61

Query: 106 CVQIRNWF-DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 163
            VQ+     + +  + IV E +   SL D+LR         D + + +  + E + ++  
Sbjct: 62  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 121

Query: 164 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 223
              +H DL   NVL+                            + +  KV DFG T    
Sbjct: 122 NNFVHRDLAARNVLV---------------------------SEDNVAKVSDFGLTKEAS 154

Query: 224 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 283
             Q+       + APE +    ++   D+WS G +L E+ +   +      L+ +     
Sbjct: 155 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV----- 209

Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
                             +  +  ++D P+G                             
Sbjct: 210 ----------------VPRVEKGYKMDAPDGCPP-------------------------- 227

Query: 344 DLTHLLQGLLRYDPTDRLTAREALRH 369
            +  +++     D   R +  +    
Sbjct: 228 AVYEVMKNCWHLDAAMRPSFLQLREQ 253

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  120 bits (302), Expect = 9e-32
 Identities = 66/336 (19%), Positives = 109/336 (32%), Gaps = 91/336 (27%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDK 101
                +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +     
Sbjct: 44  DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFP- 101

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 161
                    ++ D  N   ++    G  ++  LR+     F     R  A Q++    ++
Sbjct: 102 --FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYL 157

Query: 162 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 221
           H L +I+ DLKPEN+L+    Y                           I+V DFG    
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGY---------------------------IQVTDFGFAKR 190

Query: 222 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 281
            +     +  T    APE+IL  G+    D W++G ++ E+  G   F   + ++    +
Sbjct: 191 VKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250

Query: 282 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 341
                  P H                                                  
Sbjct: 251 VSGKVRFPSHFSS----------------------------------------------- 263

Query: 342 AGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
             DL  LL+ LL+ D T R         +   H +F
Sbjct: 264 --DLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 2e-31
 Identities = 62/333 (18%), Positives = 117/333 (35%), Gaps = 86/333 (25%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKG 102
            +  ++G G+FG V +    +    VA+K++       +  +A   E+ VL++       
Sbjct: 11  TVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT------ 61

Query: 103 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 159
             R V I  +  Y     + IV +   GSSLY  L     + F +  + +IARQ  + + 
Sbjct: 62  --RHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 118

Query: 160 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 219
           ++H   +IH DLK  N+ L     +K+ D+  +    + S   +                
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--------------- 163

Query: 220 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                    +  +  + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 164 -------EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 216

Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
            +  M                      V RG L                        + +
Sbjct: 217 QIIFM----------------------VGRGYLSPD---------------------LSK 233

Query: 337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 369
              +    +  L+   L+    +R    + L  
Sbjct: 234 VRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  117 bits (294), Expect = 3e-31
 Identities = 48/270 (17%), Positives = 91/270 (33%), Gaps = 37/270 (13%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHDK 101
           ++   +G G   +V    D      VA+K++R        +      E +    L  H  
Sbjct: 10  ELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHP- 67

Query: 102 GGNRCVQIRNWFDYRNH----ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
                V + +  +          IV E + G +L D +              E+     +
Sbjct: 68  ---AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQ 122

Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            + F H   +IH D+KP N+++ ++  +KV D+  +       +   +            
Sbjct: 123 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT----------- 171

Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 276
                       ++ T  Y +PE   G       D++S+GC+L E+ TGE  F     + 
Sbjct: 172 ----------AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 221

Query: 277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRR 306
                 R     P    + +    +  V +
Sbjct: 222 VAYQHVREDPIPPSARHEGLSADLDAVVLK 251

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (292), Expect = 7e-31
 Identities = 62/331 (18%), Positives = 115/331 (34%), Gaps = 80/331 (24%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL +H     R
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQL-QHQ----R 69

Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 70  LVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH DL+  N+L+  +   K+ D+  +     +    +                     
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG------------------- 169

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
                     + APE I    +T   D+WS G +L E+ T   +         +      
Sbjct: 170 ----AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV------ 219

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
                           +   R  R+  P+                              +
Sbjct: 220 ---------------IQNLERGYRMVRPDNCPE--------------------------E 238

Query: 345 LTHLLQGLLRYDPTDRLTAREALR--HPFFT 373
           L  L++   +  P DR T          FFT
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 1e-30
 Identities = 59/330 (17%), Positives = 109/330 (33%), Gaps = 78/330 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++  K+G+G FG+V           VAIK ++      EA + E +V+++L        +
Sbjct: 20  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHE-----K 73

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            VQ+           +       SL DFL+    +   +  + ++A Q+   +A++  + 
Sbjct: 74  LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 133

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
            +H DL+  N+L+  +   KV D+  +     +    ++                     
Sbjct: 134 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-------------------- 173

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
                    + APE  L   +T   D+WS G +L EL T   +                 
Sbjct: 174 ---AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV----------- 219

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
               + +L +V+R         R+  P                                L
Sbjct: 220 ---NREVLDQVERGY-------RMPCPPECPE--------------------------SL 243

Query: 346 THLLQGLLRYDPTDRLTAREALR--HPFFT 373
             L+    R +P +R T          +FT
Sbjct: 244 HDLMCQCWRKEPEERPTFEYLQAFLEDYFT 273

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (277), Expect = 9e-29
 Identities = 60/332 (18%), Positives = 119/332 (35%), Gaps = 85/332 (25%)

Query: 50  KMGEGTFGQVLECWDRERK--EMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGN 104
           ++G G FG V + + + +K  + VA+KI++        ++  + E  V+QQL  +     
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNP---- 68

Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
             V++    +  + + ++       L  +L++N  R      + E+  Q+   + ++ + 
Sbjct: 69  YIVRMIGICEAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES 126

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             +H DL   NVLLV+  Y K+ D+  S     D +Y+K                     
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ------------------- 167

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLAMMER 283
              +      + APE I    ++   D+WS G ++ E    G+  ++  +  E  AM+E+
Sbjct: 168 --THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 225

Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
                                   R+  P G                             
Sbjct: 226 GE----------------------RMGCPAGCPR-------------------------- 237

Query: 344 DLTHLLQGLLRYDPTDRLTARE---ALRHPFF 372
           ++  L+     YD  +R         LR+ ++
Sbjct: 238 EMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 269

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (274), Expect = 2e-28
 Identities = 57/324 (17%), Positives = 104/324 (32%), Gaps = 76/324 (23%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
               ++G G FG V   +    K+ VAIK +R      E  + E EV+ +L  H     +
Sbjct: 8   TFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHP----K 61

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            VQ+      +  IC+VFE +         +     F  + +  +   + E +A++ + C
Sbjct: 62  LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 121

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
           +IH DL   N L+  ++ IKV D+  +     D                           
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-------------------- 161

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 285
                    + +PEV     ++   D+WS G ++ E+ +   +   + +   +       
Sbjct: 162 ---TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV------- 211

Query: 286 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 345
                          E      RL  P  A++                           +
Sbjct: 212 --------------VEDISTGFRLYKPRLAST--------------------------HV 231

Query: 346 THLLQGLLRYDPTDRLTAREALRH 369
             ++    +  P DR      LR 
Sbjct: 232 YQIMNHCWKERPEDRPAFSRLLRQ 255

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  109 bits (274), Expect = 3e-28
 Identities = 51/294 (17%), Positives = 110/294 (37%), Gaps = 31/294 (10%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
            +  K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH      
Sbjct: 20  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----N 74

Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            VQ+           I+ E +   +L D+LR+ N +     ++  +A Q+   + ++   
Sbjct: 75  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 134

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             IH DL   N L+  +  +KV D+  S     D+                         
Sbjct: 135 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT----------------------- 171

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL--AMME 282
                     + APE +    ++   D+W+ G +L E+ T         +L  +   + +
Sbjct: 172 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 231

Query: 283 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 336
                 P+   ++V        +    D P  A   ++ +++ +   + + + +
Sbjct: 232 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEK 285

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (272), Expect = 8e-28
 Identities = 57/343 (16%), Positives = 103/343 (30%), Gaps = 95/343 (27%)

Query: 46  KIHSKMGEGTFGQVLECWDRE--RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 101
           K    +GEG FGQVL+   ++   +   AIK ++    K        E+EVL +L  H  
Sbjct: 13  KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP- 71

Query: 102 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNY--------------RSFPIDL 146
                + +    ++R ++ +  E     +L DFLRK+                 +     
Sbjct: 72  ---NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 128

Query: 147 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 206
           +   A  +   + ++     IH DL   N+L+  +   K+ D+  S              
Sbjct: 129 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK------ 182

Query: 207 KSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 266
                              +        + A E +    +T   D+WS G +L E+ +  
Sbjct: 183 -------------------KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 223

Query: 267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 326
                      L                      EK  +  RL+ P              
Sbjct: 224 GTPYCGMTCAEL---------------------YEKLPQGYRLEKPLNCDD--------- 253

Query: 327 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 369
                            ++  L++   R  P +R +  + L  
Sbjct: 254 -----------------EVYDLMRQCWREKPYERPSFAQILVS 279

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 2e-27
 Identities = 57/355 (16%), Positives = 110/355 (30%), Gaps = 105/355 (29%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKE-----MVAIKIVR--GIKKYREAAMIEIEVLQQLAK 98
           +    +G G FG+V+        +      VA+K+++       REA M E++++ QL  
Sbjct: 40  EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 99

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYR----------------- 140
           H+      V +         I ++FE      L ++LR    +                 
Sbjct: 100 HE----NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 155

Query: 141 ----SFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP 196
                   + +   A Q+ + + F+     +H DL   NVL+   + +K+ D+  +    
Sbjct: 156 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 215

Query: 197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVG 256
            DS+Y  R                              + APE +    +T   D+WS G
Sbjct: 216 SDSNYVVRG----------------------NARLPVKWMAPESLFEGIYTIKSDVWSYG 253

Query: 257 CILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEG 314
            +L E+ + G   +       +                        K ++ G ++D P  
Sbjct: 254 ILLWEIFSLGVNPYPGIPVDANF----------------------YKLIQNGFKMDQPFY 291

Query: 315 AASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 369
           A                            ++  ++Q    +D   R +       
Sbjct: 292 ATE--------------------------EIYIIMQSCWAFDSRKRPSFPNLTSF 320

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  106 bits (265), Expect = 6e-27
 Identities = 49/250 (19%), Positives = 97/250 (38%), Gaps = 30/250 (12%)

Query: 46  KIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHD 100
           KI   +G G FG+V     +   +R+  VAIK ++    +K R   + E  ++ Q   H 
Sbjct: 29  KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DHP 87

Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                 + +         + I+ E + +   D   + N   F +  +  + R +   + +
Sbjct: 88  N----VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKY 143

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           + D+  +H DL   N+L+ S+   KV D+  S                   + ++  ++ 
Sbjct: 144 LADMNYVHRDLAARNILVNSNLVCKVSDFGLS-------------------RFLEDDTSD 184

Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA 279
                         + APE I    +T   D+WS G ++ E+ + GE  +    N + + 
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN 244

Query: 280 MMERVLGPLP 289
            +E+     P
Sbjct: 245 AIEQDYRLPP 254

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 6e-27
 Identities = 58/334 (17%), Positives = 111/334 (33%), Gaps = 62/334 (18%)

Query: 47  IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRC 106
           +   +G+G FG+V     + R E VA+KI    ++       EI     L +H+      
Sbjct: 7   LQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVML-RHENILGFI 63

Query: 107 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNY-----RSFPIDLVREIARQLLECIAF 160
                       + +V +     SL+D+L +            +     +A   +E +  
Sbjct: 64  AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 123

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
                + H DLK +N+L+  +    + D                      + V    +T 
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADL--------------------GLAVRHDSATD 163

Query: 221 YERPDQNYIVSTRHYRAPEVILG------LGWTYPCDIWSVGCILVELCTGEALFQTHEN 274
                 N+ V T+ Y APEV+               DI+++G +  E+    ++   HE+
Sbjct: 164 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 223

Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
            +          P  + M K V        ++ R + P    S E+++ + K        
Sbjct: 224 YQLPYYDLVPSDPSVEEMRKVVCE------QKLRPNIPNRWQSCEALRVMAK-------- 269

Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 368
                        +++     +   RLTA    +
Sbjct: 270 -------------IMRECWYANGAARLTALRIKK 290

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (264), Expect = 7e-27
 Identities = 66/333 (19%), Positives = 115/333 (34%), Gaps = 85/333 (25%)

Query: 50  KMGEGTFGQVLECWDRERKE--MVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGGNR 105
           ++G G FG V +   R RK+   VAIK+++    K   E  M E +++ QL  +      
Sbjct: 16  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNP----Y 70

Query: 106 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
            V++         + +V E   G  L+ FL        P+  V E+  Q+   + ++ + 
Sbjct: 71  IVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK 128

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             +H DL   NVLLV+  Y K+ D+  S     D SY+                      
Sbjct: 129 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR------------------- 169

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLAMMER 283
             +       + APE I    ++   D+WS G  + E L  G+  ++  +  E +A +E+
Sbjct: 170 --SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 227

Query: 284 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 343
                                   R++ P                               
Sbjct: 228 GK----------------------RMECPPECPP-------------------------- 239

Query: 344 DLTHLLQGLLRYDPTDRLTARE---ALRHPFFT 373
           +L  L+     Y   DR         +R  +++
Sbjct: 240 ELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 272

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 9e-27
 Identities = 61/348 (17%), Positives = 114/348 (32%), Gaps = 98/348 (28%)

Query: 46  KIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAK 98
                +G G FG+V+E         +    VA+K+++       REA M E++VL  L  
Sbjct: 26  SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRK----------------NNYRS 141
           H       V +           ++ E      L +FLR+                ++  +
Sbjct: 86  HM----NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141

Query: 142 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 201
             ++ +   + Q+ + +AF+     IH DL   N+LL      K+ D+  +     DS+Y
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201

Query: 202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 261
                                   +        + APE I    +T+  D+WS G  L E
Sbjct: 202 VV----------------------KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 239

Query: 262 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEGAASRES 320
           L +  +       ++                         K ++ G R+  PE       
Sbjct: 240 LFSLGSSPYPGMPVDSKFY---------------------KMIKEGFRMLSPE------- 271

Query: 321 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 368
                              H+  ++  +++     DP  R T ++ ++
Sbjct: 272 -------------------HAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (260), Expect = 2e-26
 Identities = 51/325 (15%), Positives = 104/325 (32%), Gaps = 78/325 (24%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 105
               ++G G FG V     R + + VAIK+++      +  + E +V+  L  H+    +
Sbjct: 7   TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNL-SHE----K 60

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            VQ+      +  I I+ E + +       +     F    + E+ + + E + ++    
Sbjct: 61  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 120

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
            +H DL   N L+     +KV D+  S +   D                           
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG-------------------- 160

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERV 284
                    +  PEV++   ++   DIW+ G ++ E+ + G+  ++   N E    + + 
Sbjct: 161 ---SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 217

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
           L                      RL  P  A+                            
Sbjct: 218 L----------------------RLYRPHLASE--------------------------K 229

Query: 345 LTHLLQGLLRYDPTDRLTAREALRH 369
           +  ++         +R T +  L +
Sbjct: 230 VYTIMYSCWHEKADERPTFKILLSN 254

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (260), Expect = 4e-26
 Identities = 62/343 (18%), Positives = 115/343 (33%), Gaps = 90/343 (26%)

Query: 46  KIHSKMGEGTFGQVLECWD---RERKEMVAIKIVRGIK-----KYREAAMIEIEVLQQLA 97
           ++   +G G +G+V         +  ++ A+K+++        K  E    E +VL+ + 
Sbjct: 27  ELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR 86

Query: 98  KHDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 156
           +        V +   F     + ++ +   G  L+  L +     F    V+    +++ 
Sbjct: 87  QS----PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVL 140

Query: 157 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 216
            +  +H L +I+ D+K EN+LL S+ ++ + D+  S                        
Sbjct: 141 ALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF--------------------- 179

Query: 217 GSTTYERPDQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHEN 274
                E         T  Y AP+++ G   G     D WS+G ++ EL TG + F     
Sbjct: 180 --VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE 237

Query: 275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 334
               A + R                    + +    +P+  ++                 
Sbjct: 238 KNSQAEISR-------------------RILKSEPPYPQEMSA----------------- 261

Query: 335 MQHVDHSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 372
                        L+Q LL  DP  RL      A E   H FF
Sbjct: 262 ---------LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 295

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (257), Expect = 7e-26
 Identities = 44/253 (17%), Positives = 91/253 (35%), Gaps = 34/253 (13%)

Query: 52  GEGTFGQVLECWDR----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNR 105
           G G FG+V +   +    +++  VAIK ++    +K R   + E  ++ Q + H      
Sbjct: 16  GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH-----N 70

Query: 106 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 165
            +++         + I+ E + +   D   +     F +  +  + R +   + ++ ++ 
Sbjct: 71  IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 130

Query: 166 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 225
            +H DL   N+L+ S+   KV D+  S     D                           
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT-------------------- 170

Query: 226 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL--AMMER 283
            +       + APE I    +T   D+WS G ++ E+ T         +   +  A+ + 
Sbjct: 171 -SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG 229

Query: 284 VLGPLPQHMLKRV 296
              P P      +
Sbjct: 230 FRLPTPMDCPSAI 242

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 4e-25
 Identities = 44/325 (13%), Positives = 83/325 (25%), Gaps = 76/325 (23%)

Query: 50  KMGEGTFGQVLECWDRE---RKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGN 104
            +G G FG V      +   +K   A+K +  I         + E  +++    H    N
Sbjct: 34  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHP---N 89

Query: 105 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 164
               +           +V   +         +N   +  +  +     Q+ + + F+   
Sbjct: 90  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 149

Query: 165 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 224
             +H DL   N +L     +KV D+  +                +               
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA--------------- 194

Query: 225 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 284
                     + A E +    +T   D+WS G +L EL T  A      N   +      
Sbjct: 195 -----KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI------ 243

Query: 285 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 344
                              ++  RL  PE                          +    
Sbjct: 244 ---------------TVYLLQGRRLLQPE--------------------------YCPDP 262

Query: 345 LTHLLQGLLRYDPTDRLTAREALRH 369
           L  ++          R +  E +  
Sbjct: 263 LYEVMLKCWHPKAEMRPSFSELVSR 287

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.4 bits (244), Expect = 5e-24
 Identities = 53/348 (15%), Positives = 105/348 (30%), Gaps = 97/348 (27%)

Query: 46  KIHSKMGEGTFGQVLECWDR-------ERKEMVAIKIVR--GIKKYREAAMIEIEVLQQL 96
            +   +GEG FGQV+             R   VA+K+++    +K     + E+E+++ +
Sbjct: 16  VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 75

Query: 97  AKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLR--------------KNNYRS 141
            KH       + +         + ++ E     +L ++L+               N    
Sbjct: 76  GKH----KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 131

Query: 142 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 201
                +   A Q+   + ++     IH DL   NVL+     +K+ D+  +        Y
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191

Query: 202 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 261
            K                               + APE +    +T+  D+WS G +L E
Sbjct: 192 KKTT----------------------NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE 229

Query: 262 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESI 321
           + T          +E L                      +      R+D P    +    
Sbjct: 230 IFTLGGSPYPGVPVEEL---------------------FKLLKEGHRMDKPSNCTN---- 264

Query: 322 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 369
                                 +L  +++      P+ R T ++ +  
Sbjct: 265 ----------------------ELYMMMRDCWHAVPSQRPTFKQLVED 290

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 98.4 bits (244), Expect = 6e-24
 Identities = 53/353 (15%), Positives = 99/353 (28%), Gaps = 104/353 (29%)

Query: 46  KIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAK 98
           +    +GEG FG+V +         E   MVA+K+++       +     E  ++ +   
Sbjct: 16  EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN 75

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRS---------------- 141
                   V++         +C++FE +    L +FLR  +  +                
Sbjct: 76  P-----NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 130

Query: 142 ------FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT 195
                         IARQ+   +A++ +   +H DL   N L+  +  +K+ D+  S + 
Sbjct: 131 SPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 190

Query: 196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSV 255
                Y                                 +  PE I    +T   D+W+ 
Sbjct: 191 YSADYYKADGN----------------------DAIPIRWMPPESIFYNRYTTESDVWAY 228

Query: 256 GCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA 315
           G +L E+ +           E +                              L  PE  
Sbjct: 229 GVVLWEIFSYGLQPYYGMAHEEV---------------------IYYVRDGNILACPENC 267

Query: 316 ASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 368
                                       +L +L++      P DR +     R
Sbjct: 268 PL--------------------------ELYNLMRLCWSKLPADRPSFCSIHR 294

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.0 bits (243), Expect = 7e-24
 Identities = 55/349 (15%), Positives = 110/349 (31%), Gaps = 96/349 (27%)

Query: 46  KIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAK 98
            +  ++G+G+FG V E   +     E +  VAIK V      + R   + E  V+++   
Sbjct: 23  TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC 82

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRS--------FPIDLVRE 149
           H       V++           ++ E +    L  +LR                +  + +
Sbjct: 83  H-----HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 137

Query: 150 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 209
           +A ++ + +A+++    +H DL   N ++     +K+ D+  +    +   Y K      
Sbjct: 138 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK--- 194

Query: 210 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 269
                               +    + +PE +    +T   D+WS G +L E+ T     
Sbjct: 195 -------------------GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 235

Query: 270 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 329
               + E +                         +  G LD P                 
Sbjct: 236 YQGLSNEQV---------------------LRFVMEGGLLDKP----------------- 257

Query: 330 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR------HPFF 372
                    D+    L  L++   +Y+P  R +  E +        P F
Sbjct: 258 ---------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 297

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.4 bits (239), Expect = 2e-23
 Identities = 42/253 (16%), Positives = 93/253 (36%), Gaps = 35/253 (13%)

Query: 46  KIHSKMGEGTFGQVLECWDRE---RKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAK 98
           ++  K+G+G+FG V          +   VA+K ++       +  +  + E+  +  L  
Sbjct: 11  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-D 69

Query: 99  HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 158
           H       +++         + +V E           + +   F +  +   A Q+ E +
Sbjct: 70  HRN----LIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 124

Query: 159 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 218
            ++     IH DL   N+LL + + +K+ D+      P++  ++                
Sbjct: 125 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM-------------- 170

Query: 219 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH 277
                  Q +      + APE +    +++  D W  G  L E+ T G+  +      + 
Sbjct: 171 -------QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 223

Query: 278 LAMMERVLGPLPQ 290
           L  +++    LP+
Sbjct: 224 LHKIDKEGERLPR 236

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.4 bits (239), Expect = 2e-23
 Identities = 53/329 (16%), Positives = 91/329 (27%), Gaps = 81/329 (24%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKE---MVAIKIVRGI--KKYREAAMIEIEVLQQLAKHD 100
           ++   +GEG FG V +      +     VAIK  +       RE  + E   ++Q   H 
Sbjct: 10  ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHP 68

Query: 101 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 160
                 V++       N + I+ E           +    S  +  +   A QL   +A+
Sbjct: 69  ----HIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 123

Query: 161 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 220
           +     +H D+   NVL+ S++ +K+ D+  S +    + Y                   
Sbjct: 124 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK--------------- 168

Query: 221 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 280
                         + APE I    +T   D+W  G  + E+               +  
Sbjct: 169 --------GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-- 218

Query: 281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 340
                                +     RL  P                            
Sbjct: 219 -------------------IGRIENGERLPMPPNCPP----------------------- 236

Query: 341 SAGDLTHLLQGLLRYDPTDRLTAREALRH 369
               L  L+     YDP+ R    E    
Sbjct: 237 ---TLYSLMTKCWAYDPSRRPRFTELKAQ 262

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.8 bits (240), Expect = 3e-23
 Identities = 50/332 (15%), Positives = 96/332 (28%), Gaps = 85/332 (25%)

Query: 46  KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA--------MIEIEVLQQLA 97
           K    +G G FG V +       E V I +   IK+ REA         + E  V+  + 
Sbjct: 12  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA--IKELREATSPKANKEILDEAYVMASV- 68

Query: 98  KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 157
            +        ++           I        L D++R++   +     +     Q+ + 
Sbjct: 69  DNP----HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKG 123

Query: 158 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 217
           + ++ D  ++H DL   NVL+ + +++K+ D+  +     +   +               
Sbjct: 124 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------------- 170

Query: 218 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 277
                            + A E IL   +T+  D+WS G  + EL T  +          
Sbjct: 171 ---------EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 221

Query: 278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 337
           +                     +    +  RL  P                         
Sbjct: 222 I---------------------SSILEKGERLPQPPICTI-------------------- 240

Query: 338 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 369
                 D+  ++      D   R   RE +  
Sbjct: 241 ------DVYMIMVKCWMIDADSRPKFRELIIE 266

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.1 bits (225), Expect = 2e-21
 Identities = 55/347 (15%), Positives = 107/347 (30%), Gaps = 95/347 (27%)

Query: 46  KIHSKMGEGTFGQVLECWDRERK-----EMVAIKIVR--GIKKYREAAMIEIEVLQQLAK 98
           K+   +G G FGQV+E              VA+K+++         A M E+++L  +  
Sbjct: 16  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 75

Query: 99  HDKGGNRCVQIRN-WFDYRNHICIVFEKL-GSSLYDFLRKNNY--------------RSF 142
           H       V +          + ++ E     +L  +LR                     
Sbjct: 76  H----LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 131

Query: 143 PIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF 202
            ++ +   + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD  Y 
Sbjct: 132 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 191

Query: 203 KRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 262
           ++                              + APE I    +T   D+WS G +L E+
Sbjct: 192 RK----------------------GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 229

Query: 263 CTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIK 322
            +  A                    + +   +R+                          
Sbjct: 230 FSLGASPYPGVK-------------IDEEFCRRLK------------------------- 251

Query: 323 SVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 369
                   +   M+  D++  ++   +      +P+ R T  E + H
Sbjct: 252 --------EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 64.0 bits (155), Expect = 1e-12
 Identities = 34/223 (15%), Positives = 64/223 (28%), Gaps = 39/223 (17%)

Query: 45  DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHDKGG 103
           D I   MGEG    V  C+  +  E   +K  + G   +++            +      
Sbjct: 2   DAIGKLMGEGKESAVFNCYSEKFGE-CVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS 60

Query: 104 NR-CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
            R   +            +   +  + L + +         ++   E+   +LE +A  +
Sbjct: 61  ARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFY 120

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTY 221
              ++H DL   NVL+                                I +IDF  S   
Sbjct: 121 HRGIVHGDLSQYNVLVSEEG----------------------------IWIIDFPQSVEV 152

Query: 222 ERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVE 261
                  I+     R    I+      +    DI S    +++
Sbjct: 153 GEEGWREIL----ERDVRNIITYFSRTYRTEKDINSAIDRILQ 191

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} Length = 395

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 43.3 bits (101), Expect = 3e-05
 Identities = 24/175 (13%), Positives = 49/175 (28%), Gaps = 10/175 (5%)

Query: 43  FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKG 102
              K++     G   + +        E+    +       + A  +      ++    + 
Sbjct: 106 LGPKLYGIFSGGRLEEYIPSRPLSCHEISLAHMST-----KIAKRVAKVHQLEVPIWKEP 160

Query: 103 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 162
              C  ++ W            +        +   N     +DL RE+            
Sbjct: 161 DYLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNC----LDLARELEFLRAHISLSKS 216

Query: 163 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK-DSSYFKRMPKSSAIKVIDF 216
            +   H DL+  N+LL  +    +     S  T    +S     P    + +IDF
Sbjct: 217 PVTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDF 271

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	379
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.89
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.27
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.58
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.58
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.05
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.16
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.09

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-58  Score=415.65  Aligned_cols=250  Identities=25%  Similarity=0.426  Sum_probs=214.0

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ..|++.+.||+|+||+||+|+++.+++.||+|++...    ......+.+|+.+++.+     .||||+++++++.+++.
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~~~~~~~~~~~   80 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-----RHPNILRLYGYFHDATR   80 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSSE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhc-----CCCCCCeEEEEEEECCE
Confidence            3588999999999999999999999999999998632    23345667899988887     78999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      +|+||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||+                   
T Consensus        81 ~~ivmEy~~~g~L~~~l~~~~--~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill-------------------  139 (263)
T d2j4za1          81 VYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-------------------  139 (263)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE-------------------
T ss_pred             EEEEEeecCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeeeecccccee-------------------
Confidence            99999999 899999998765  69999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC-CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                              +.++.+||+|||.|....... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+
T Consensus       140 --------~~~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~  211 (263)
T d2j4za1         140 --------GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE  211 (263)
T ss_dssp             --------CTTSCEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             --------cCCCCEeecccceeeecCCCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHH
Confidence                    455667888888876544332 34579999999999999999999999999999999999999998877666


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.+.....|                                                 +..++++++||.+||+.|
T Consensus       212 ~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~~L~~d  242 (263)
T d2j4za1         212 TYKRISRVEFTFP-------------------------------------------------DFVTEGARDLISRLLKHN  242 (263)
T ss_dssp             HHHHHHTTCCCCC-------------------------------------------------TTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHcCCCCCC-------------------------------------------------ccCCHHHHHHHHHHccCC
Confidence            5554433222222                                                 135678999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~  375 (379)
                      |++|||++|+|+||||+++
T Consensus       243 p~~R~t~~eil~hp~~~~~  261 (263)
T d2j4za1         243 PSQRPMLREVLEHPWITAN  261 (263)
T ss_dssp             GGGSCCHHHHHTCHHHHHH
T ss_pred             HhHCcCHHHHHcCcCcCCc
Confidence            9999999999999999753

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-57  Score=413.96  Aligned_cols=252  Identities=26%  Similarity=0.393  Sum_probs=214.7

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      ...|++.++||+|+||+||+|.++.+|+.||+|+++.. ......+.+|+.+++++     .|+||+++++++.+++.+|
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~~~   93 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-----KNPNIVNYLDSYLVGDELW   93 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETTEEE
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhC-----CCCCEeeEeEEEEECCEEE
Confidence            35699999999999999999999999999999998743 23456678899999988     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ |++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||+                     
T Consensus        94 ivmEy~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl---------------------  149 (293)
T d1yhwa1          94 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---------------------  149 (293)
T ss_dssp             EEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---------------------
T ss_pred             EEEEecCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEE---------------------
Confidence            999999 99999988765   49999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                            +.++.+||+|||+|.......   ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus       150 ------~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~  223 (293)
T d1yhwa1         150 ------GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR  223 (293)
T ss_dssp             ------CTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             ------CCCCcEeeccchhheeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH
Confidence                  555678888888887543322   34579999999999999999999999999999999999999998877665


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.....+...                                              .+...++++++||.+||+.|
T Consensus       224 ~~~~~~~~~~~~~~----------------------------------------------~~~~~s~~~~~li~~~L~~d  257 (293)
T d1yhwa1         224 ALYLIATNGTPELQ----------------------------------------------NPEKLSAIFRDFLNRCLDMD  257 (293)
T ss_dssp             HHHHHHHHCSCCCS----------------------------------------------SGGGSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHhCCCCCCC----------------------------------------------CcccCCHHHHHHHHHHccCC
Confidence            55444332211110                                              11246788999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTR  374 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~  374 (379)
                      |.+|||++|+|+||||+.
T Consensus       258 P~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         258 VEKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             TTTSCCHHHHTTCGGGGG
T ss_pred             hhHCcCHHHHhcCHhhCC
Confidence            999999999999999964

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-58  Score=413.59  Aligned_cols=254  Identities=24%  Similarity=0.351  Sum_probs=206.8

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      .|++.++||+|+||+||+|+++.+|+.||+|+++...  .....+.+|+.+++++     .|+||+++++++.+++.+|+
T Consensus         6 dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l-----~HpnIv~~~~~~~~~~~~~i   80 (271)
T d1nvra_           6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNIQYL   80 (271)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTC-----CCTTBCCEEEEEEETTEEEE
T ss_pred             ceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhC-----CCCCEeeEeeeeccCceeEE
Confidence            5899999999999999999999999999999986432  2345677899999888     78999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      ||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||+                      
T Consensus        81 vmEy~~gg~L~~~l~~~~--~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl----------------------  136 (271)
T d1nvra_          81 FLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL----------------------  136 (271)
T ss_dssp             EEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----------------------
T ss_pred             EEeccCCCcHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEE----------------------
Confidence            99999 889999986654  69999999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCcccccCCC-----CCcccccCCccchhhhhCCCC-CCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                           +.++.+||+|||+|......     ....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...+.
T Consensus       137 -----~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~  211 (271)
T d1nvra_         137 -----DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD  211 (271)
T ss_dssp             -----CTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSST
T ss_pred             -----CCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCCh
Confidence                 45566888888887643222     134579999999999988876 5789999999999999999999976543


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      ..............+                                              ..+...++++.+||.+||+
T Consensus       212 ~~~~~~~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~L~  245 (271)
T d1nvra_         212 SCQEYSDWKEKKTYL----------------------------------------------NPWKKIDSAPLALLHKILV  245 (271)
T ss_dssp             TSHHHHHHHTTCTTS----------------------------------------------TTGGGSCHHHHHHHHHHSC
T ss_pred             HHHHHHHHhcCCCCC----------------------------------------------CccccCCHHHHHHHHHHcC
Confidence            222211111111100                                              0123467889999999999


Q ss_pred             cCCCCCcCHHHHhcCCCCCCCCc
Q 017021          355 YDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      .||++|||++|+|+||||++...
T Consensus       246 ~dP~~R~t~~eil~hpwf~~~l~  268 (271)
T d1nvra_         246 ENPSARITIPDIKKDRWYNKPLK  268 (271)
T ss_dssp             SSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             CChhHCcCHHHHhcCHhhCcCCC
Confidence            99999999999999999986543

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.3e-57  Score=415.18  Aligned_cols=257  Identities=25%  Similarity=0.430  Sum_probs=204.7

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      -.|++.+.||+|+||+||+|+++.+|+.||+|++....  .....+.+|+.++..+     .||||+++++++++++.+|
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~l~~~~~~~~~~~   83 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI-----KHPNIVALDDIYESGGHLY   83 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTC-----CCTTBCCEEEEEECSSEEE
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEECCEEE
Confidence            34899999999999999999999999999999997432  2345566799999887     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||| |++|.+++...+  .+++..+..++.||+.||+|||+.||+||||||+||++...                  
T Consensus        84 lvmE~~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~------------------  143 (307)
T d1a06a_          84 LIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL------------------  143 (307)
T ss_dssp             EEECCCCSCBHHHHHHTCS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS------------------
T ss_pred             EEEeccCCCcHHHhhhccc--CCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeeccc------------------
Confidence            999999 899999998754  69999999999999999999999999999999999999432                  


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                            +.++.+||+|||+|.......  ...+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus       144 ------~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~  217 (307)
T d1a06a_         144 ------DEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL  217 (307)
T ss_dssp             ------STTCCEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ------CCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHH
Confidence                  356778999999987654433  346799999999999999999999999999999999999999998777666


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.+....++..                                             .++..++++.+||.+||+.||
T Consensus       218 ~~~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~~li~~~L~~dP  252 (307)
T d1a06a_         218 FEQILKAEYEFDSP---------------------------------------------YWDDISDSAKDFIRHLMEKDP  252 (307)
T ss_dssp             HHHHHTTCCCCCTT---------------------------------------------TTTTSCHHHHHHHHHHSCSSG
T ss_pred             HHHHhccCCCCCCc---------------------------------------------cccCCCHHHHHHHHHHccCCH
Confidence            55554432222211                                             123467889999999999999


Q ss_pred             CCCcCHHHHhcCCCCCCC
Q 017021          358 TDRLTAREALRHPFFTRD  375 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f~~~  375 (379)
                      ++|||++|+++||||++.
T Consensus       253 ~~R~s~~eil~hp~~~~~  270 (307)
T d1a06a_         253 EKRFTCEQALQHPWIAGD  270 (307)
T ss_dssp             GGSCCHHHHHHSTTTTSS
T ss_pred             hHCcCHHHHhcCHhhCCC
Confidence            999999999999999864

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-57  Score=410.13  Aligned_cols=256  Identities=25%  Similarity=0.435  Sum_probs=214.1

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .-.|++++.||+|+||+||+|+++.+|+.||+|+++.. ......+.+|+.+++++     .||||+++++++.+++..|
T Consensus        11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l-----~HpnIv~l~~~~~~~~~~~   85 (288)
T d2jfla1          11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC-----DHPNIVKLLDAFYYENNLW   85 (288)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHC-----CCTTBCCEEEEEEETTEEE
T ss_pred             ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEeeCCeEE
Confidence            34689999999999999999999999999999999743 34456788899999998     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|.+++.+.. ..+++..+..++.||+.||.|||++||+||||||+|||+                     
T Consensus        86 lvmEy~~~g~L~~~~~~~~-~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll---------------------  143 (288)
T d2jfla1          86 ILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF---------------------  143 (288)
T ss_dssp             EEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---------------------
T ss_pred             EEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeE---------------------
Confidence            999999 899999976643 369999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCC---CCcccccCCccchhhhh-----CCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                            +.++.+||+|||+|......   .....||+.|+|||++.     +..|+.++|||||||++|+|++|+.||.+
T Consensus       144 ------~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~  217 (288)
T d2jfla1         144 ------TLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE  217 (288)
T ss_dssp             ------CTTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ------CCCCCEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCC
Confidence                  55667888888887543221   13457999999999984     45688999999999999999999999988


Q ss_pred             CchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhh
Q 017021          272 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  351 (379)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  351 (379)
                      .+..+....+.+...+...                                              .+...++++.+||.+
T Consensus       218 ~~~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~s~~~~~li~~  251 (288)
T d2jfla1         218 LNPMRVLLKIAKSEPPTLA----------------------------------------------QPSRWSSNFKDFLKK  251 (288)
T ss_dssp             SCGGGHHHHHHHSCCCCCS----------------------------------------------SGGGSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCCCCC----------------------------------------------ccccCCHHHHHHHHH
Confidence            7766655544432211110                                              012467889999999


Q ss_pred             ccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          352 LLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       352 ~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ||+.||++|||++|+++||||+.+.
T Consensus       252 ~L~~dp~~R~t~~ell~hp~~~~~~  276 (288)
T d2jfla1         252 CLEKNVDARWTTSQLLQHPFVTVDS  276 (288)
T ss_dssp             HSCSSTTTSCCHHHHTTSGGGCCCC
T ss_pred             HccCChhHCcCHHHHhcCcccCCCC
Confidence            9999999999999999999998653

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-57  Score=409.91  Aligned_cols=251  Identities=25%  Similarity=0.406  Sum_probs=213.7

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ..|++.+.||+|+||+||+|+++.+|+.||+|+++..    ......+.+|+.++.++     .|+||+++++++.+++.
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~l~~~~~~~~~   82 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-----DHPFFVKLYFTFQDDEK   82 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-----CSTTBCCEEEEEECSSE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHc-----CCCCeeEEEEEEEECCE
Confidence            3589999999999999999999999999999999732    23345677899999888     78999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      +|+||||+ +++|.+++...+  .+++..++.++.|++.||+|||+.||+||||||+|||+                   
T Consensus        83 ~~ivmEy~~gg~L~~~~~~~~--~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll-------------------  141 (288)
T d1uu3a_          83 LYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL-------------------  141 (288)
T ss_dssp             EEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE-------------------
T ss_pred             EEEEEEccCCCCHHHhhhccC--CCCHHHHHHHHHHHHHHHHhhccccEEcCcCCcccccc-------------------
Confidence            99999999 899999988765  69999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                              +.++.++|+|||.|.......     ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus       142 --------~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~  213 (288)
T d1uu3a_         142 --------NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG  213 (288)
T ss_dssp             --------CTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             --------CCCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCc
Confidence                    555678888888886543221     2357999999999999999999999999999999999999999987


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+....+.+.....|                                                 ...++++++||++|
T Consensus       214 ~~~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~~  244 (288)
T d1uu3a_         214 NEYLIFQKIIKLEYDFP-------------------------------------------------EKFFPKARDLVEKL  244 (288)
T ss_dssp             SHHHHHHHHHTTCCCCC-------------------------------------------------TTCCHHHHHHHHTT
T ss_pred             CHHHHHHHHHcCCCCCC-------------------------------------------------ccCCHHHHHHHHHH
Confidence            77666555443222221                                                 13567899999999


Q ss_pred             cccCCCCCcCHHH------HhcCCCCCCCC
Q 017021          353 LRYDPTDRLTARE------ALRHPFFTRDH  376 (379)
Q Consensus       353 L~~dP~~Rpta~e------~l~hp~f~~~~  376 (379)
                      |+.||++|||++|      +++||||++.+
T Consensus       245 L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~  274 (288)
T d1uu3a_         245 LVLDATKRLGCEEMEGYGPLKAHPFFESVT  274 (288)
T ss_dssp             SCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             ccCCHhHCcCHHHHcCCHHHHcCCccCCCC
Confidence            9999999999998      58999998865

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-56  Score=407.72  Aligned_cols=260  Identities=24%  Similarity=0.434  Sum_probs=220.6

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-------hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      -.|++.++||+|+||+||+|+++.+|+.||+|+++...       .....+.+|+.+++++     .|+||+++++++++
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~   84 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-----QHPNVITLHEVYEN   84 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-----CCTTBCCEEEEEEC
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEE
Confidence            35899999999999999999999999999999986321       2345678899999998     78999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      ++.+|+||||| +++|.+++....  .+++..++.++.||+.||+|||+.||+||||||+||+++.++            
T Consensus        85 ~~~~~iv~E~~~gg~L~~~i~~~~--~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~------------  150 (293)
T d1jksa_          85 KTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN------------  150 (293)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSS------------
T ss_pred             CCEEEEEEEcCCCccccchhcccc--ccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCC------------
Confidence            99999999999 899999998765  699999999999999999999999999999999999996543            


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                 .....+||+|||.+.......  ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus       151 -----------~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~  219 (293)
T d1jksa_         151 -----------VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD  219 (293)
T ss_dssp             -----------SSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             -----------CcccceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCC
Confidence                       234569999999987654432  4467999999999999989999999999999999999999999988


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+....+.+.....+..                                             .+...+..+++||.+|
T Consensus       220 ~~~~~~~~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~~li~~~  254 (293)
T d1jksa_         220 TKQETLANVSAVNYEFEDE---------------------------------------------YFSNTSALAKDFIRRL  254 (293)
T ss_dssp             SHHHHHHHHHTTCCCCCHH---------------------------------------------HHTTSCHHHHHHHHTT
T ss_pred             CHHHHHHHHHhcCCCCCch---------------------------------------------hcCCCCHHHHHHHHHH
Confidence            7777666554443333322                                             1234678899999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCCCCc
Q 017021          353 LRYDPTDRLTAREALRHPFFTRDHL  377 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~~~~  377 (379)
                      |+.||++|||++|+++||||+..+.
T Consensus       255 L~~dP~~R~s~~eil~hp~~~~~~~  279 (293)
T d1jksa_         255 LVKDPKKRMTIQDSLQHPWIKPKDT  279 (293)
T ss_dssp             SCSSGGGSCCHHHHHHSTTTCC---
T ss_pred             ccCChhHCcCHHHHhcCcccCCCCh
Confidence            9999999999999999999987543

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.8e-56  Score=415.93  Aligned_cols=257  Identities=28%  Similarity=0.441  Sum_probs=220.7

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc-chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      .|+|.+.||+|+||.||+|+++.+|+.||+|++... ......+.+|+.+++++     .|+||+++++++.+++.+|+|
T Consensus        27 ~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~~~iv  101 (350)
T d1koaa2          27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-----RHPTLVNLHDAFEDDNEMVMI  101 (350)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHT-----CCTTBCCEEEEEEETTEEEEE
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhC-----CCCCCCcEEEEEEECCEEEEE
Confidence            589999999999999999999999999999999743 23345677899999998     789999999999999999999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      |||| |++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||+..                     
T Consensus       102 mE~~~gg~L~~~l~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~---------------------  159 (350)
T d1koaa2         102 YEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT---------------------  159 (350)
T ss_dssp             ECCCCSCBHHHHHTCTT-SCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS---------------------
T ss_pred             EEcCCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeecc---------------------
Confidence            9999 999999986543 25999999999999999999999999999999999999943                     


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  279 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~  279 (379)
                          +.++.+||+|||++.......  ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+...
T Consensus       160 ----~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~  235 (350)
T d1koaa2         160 ----KRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR  235 (350)
T ss_dssp             ----TTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             ----CCCCeEEEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHH
Confidence                234679999999987655444  34679999999999999999999999999999999999999999888777776


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                      .+.......+..                                             .....++++++||.+||+.||++
T Consensus       236 ~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~~li~~~L~~dP~~  270 (350)
T d1koaa2         236 NVKSCDWNMDDS---------------------------------------------AFSGISEDGKDFIRKLLLADPNT  270 (350)
T ss_dssp             HHHHTCCCSCCG---------------------------------------------GGGGCCHHHHHHHHHHCCSSGGG
T ss_pred             HHHhCCCCCCcc---------------------------------------------cccCCCHHHHHHHHHHccCChhH
Confidence            665544333221                                             11246778999999999999999


Q ss_pred             CcCHHHHhcCCCCCCCC
Q 017021          360 RLTAREALRHPFFTRDH  376 (379)
Q Consensus       360 Rpta~e~l~hp~f~~~~  376 (379)
                      |||++|+|+||||++.+
T Consensus       271 R~t~~eil~hp~~~~~~  287 (350)
T d1koaa2         271 RMTIHQALEHPWLTPGN  287 (350)
T ss_dssp             SCCHHHHHHSTTTSCTT
T ss_pred             CcCHHHHhcCcccCCCC
Confidence            99999999999998754

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=2.9e-56  Score=416.08  Aligned_cols=257  Identities=26%  Similarity=0.466  Sum_probs=220.5

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      .|++.++||+|+||.||+|+++.+|+.||+|+++... .....+.+|+.++.++     .|+||+++++++++++.+|+|
T Consensus        30 ~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~~~~~~~~~~~~~iv  104 (352)
T d1koba_          30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-----HHPKLINLHDAFEDKYEMVLI  104 (352)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-----CSTTBCCEEEEEECSSEEEEE
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEECCEEEEE
Confidence            4899999999999999999999999999999997543 2345566799888887     789999999999999999999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      |||| |++|.+.+.... ..+++..++.++.||+.||+|||++||+||||||+|||++.                     
T Consensus       105 mE~~~gg~L~~~~~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~---------------------  162 (352)
T d1koba_         105 LEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET---------------------  162 (352)
T ss_dssp             EECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS---------------------
T ss_pred             EEcCCCChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccc---------------------
Confidence            9999 999998876543 35999999999999999999999999999999999999942                     


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  279 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~  279 (379)
                          ...+.+||+|||+|.......  ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+...
T Consensus       163 ----~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~  238 (352)
T d1koba_         163 ----KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQ  238 (352)
T ss_dssp             ----TTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH
T ss_pred             ----cCCCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                245679999999998766544  33579999999999999999999999999999999999999999888877776


Q ss_pred             HHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCC
Q 017021          280 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  359 (379)
                      .+.+....++..                                             .+...++++.+||.+||+.||.+
T Consensus       239 ~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~~li~~~L~~dp~~  273 (352)
T d1koba_         239 NVKRCDWEFDED---------------------------------------------AFSSVSPEAKDFIKNLLQKEPRK  273 (352)
T ss_dssp             HHHHCCCCCCSS---------------------------------------------TTTTSCHHHHHHHHTTSCSSGGG
T ss_pred             HHHhCCCCCCcc---------------------------------------------cccCCCHHHHHHHHHHccCChhH
Confidence            666544443321                                             11246788999999999999999


Q ss_pred             CcCHHHHhcCCCCCCCC
Q 017021          360 RLTAREALRHPFFTRDH  376 (379)
Q Consensus       360 Rpta~e~l~hp~f~~~~  376 (379)
                      |||++|+|+||||++..
T Consensus       274 R~s~~eil~Hp~~~~~~  290 (352)
T d1koba_         274 RLTVHDALEHPWLKGDH  290 (352)
T ss_dssp             SCCHHHHHTSTTTSSCC
T ss_pred             CcCHHHHhcCHhhCCCc
Confidence            99999999999998653

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-57  Score=416.78  Aligned_cols=295  Identities=22%  Similarity=0.330  Sum_probs=211.4

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      +..-.|++.++||+|+||+||+|+++.+|+.||+|+++..  ......+.+|+.++.++     .||||+++++++.+++
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~l~~~~~~~~   77 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-----NSPYIVGFYGAFYSDG   77 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGC-----CCTTBCCEEEEEECSS
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEECC
Confidence            3455789999999999999999999999999999999743  33345677898888877     7899999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      ++|+||||+ +++|.+++.+.+  .+++..+..++.||+.||.|||+ .||+||||||+|||+                 
T Consensus        78 ~~~iVmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl-----------------  138 (322)
T d1s9ja_          78 EISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV-----------------  138 (322)
T ss_dssp             EEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE-----------------
T ss_pred             EEEEEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeE-----------------
Confidence            999999999 899999998765  69999999999999999999997 599999999999999                 


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCC-CCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCch
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERP-DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  274 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~  274 (379)
                                +.++.+||+|||+|..... .....+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+.
T Consensus       139 ----------~~~~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~  208 (322)
T d1s9ja_         139 ----------NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA  208 (322)
T ss_dssp             ----------CTTCCEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCT
T ss_pred             ----------CCCCCEEEeeCCCccccCCCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence                      5566788888888864322 23456899999999999999999999999999999999999999987665


Q ss_pred             HHHHHHHHH-HcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          275 LEHLAMMER-VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       275 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      .+....... ..+...... .............. ..........+........+.    ........+.++.|||.+||
T Consensus       209 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~dli~~~L  282 (322)
T d1s9ja_         209 KELELMFGCQVEGDAAETP-PRPRTPGRPLSSYG-MDSRPPMAIFELLDYIVNEPP----PKLPSGVFSLEFQDFVNKCL  282 (322)
T ss_dssp             THHHHHC--------------------------------CCCCHHHHHHHHHTSCC----CCCCBTTBCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCCcccCC-cccccccccccccc-cccccchhHHHHHhhhhccCC----ccCccccCCHHHHHHHHHHc
Confidence            443222111 111111100 00000000000000 000000000000000000000    00001235788999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      +.||.+||||+|+|+||||++
T Consensus       283 ~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         283 IKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             CSSTTTSCCHHHHHTSHHHHH
T ss_pred             CCChhHCcCHHHHhhCHhhCc
Confidence            999999999999999999975

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-56  Score=398.33  Aligned_cols=252  Identities=23%  Similarity=0.406  Sum_probs=205.9

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee--
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--  115 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~--  115 (379)
                      .+..|++.++||+|+||+||+|+++.+++.||+|++...   ......+.+|+++++++     +||||+++++++++  
T Consensus         7 ~gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~   81 (270)
T d1t4ha_           7 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-----QHPNIVRFYDSWESTV   81 (270)
T ss_dssp             TSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEEES
T ss_pred             CCCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-----CCCCeeeEEEEEeecc
Confidence            444567888999999999999999999999999998743   23345667899988887     78999999999875  


Q ss_pred             --cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecccccccCCCc
Q 017021          116 --RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       116 --~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                        +..+|+||||+ +++|.+++.+..  .+++..+..++.||+.||+|||+++  |+||||||+|||++           
T Consensus        82 ~~~~~~~ivmE~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~-----------  148 (270)
T d1t4ha_          82 KGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT-----------  148 (270)
T ss_dssp             SSCEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES-----------
T ss_pred             ccCCEEEEEEeCCCCCcHHHHHhccc--cccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceee-----------
Confidence              45789999999 999999998764  6999999999999999999999998  99999999999993           


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCC
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                                     +.++.+||+|||+|....... ....||+.|+|||++.+ .++.++|||||||++|+|++|+.||
T Consensus       149 ---------------~~~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf  212 (270)
T d1t4ha_         149 ---------------GPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPY  212 (270)
T ss_dssp             ---------------STTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ---------------CCCCCEEEeecCcceeccCCccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCC
Confidence                           235678999999887544433 34679999999999876 6999999999999999999999999


Q ss_pred             CCCchHHHH-HHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          270 QTHENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       270 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      ......+.. ..+..  +..|.                                             ..+...++++.+|
T Consensus       213 ~~~~~~~~~~~~i~~--~~~~~---------------------------------------------~~~~~~~~~~~~l  245 (270)
T d1t4ha_         213 SECQNAAQIYRRVTS--GVKPA---------------------------------------------SFDKVAIPEVKEI  245 (270)
T ss_dssp             TTCSSHHHHHHHHTT--TCCCG---------------------------------------------GGGGCCCHHHHHH
T ss_pred             CCcccHHHHHHHHHc--CCCCc---------------------------------------------ccCccCCHHHHHH
Confidence            765443322 22111  11111                                             1123466789999


Q ss_pred             HhhccccCCCCCcCHHHHhcCCCCC
Q 017021          349 LQGLLRYDPTDRLTAREALRHPFFT  373 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~hp~f~  373 (379)
                      |.+||+.||++|||++|+|+||||+
T Consensus       246 i~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         246 IEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHHccCCHhHCcCHHHHhCCcccC
Confidence            9999999999999999999999996

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-55  Score=408.17  Aligned_cols=250  Identities=26%  Similarity=0.422  Sum_probs=216.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++++.||+|+||.||+|+++.+|+.||+|+++..    ......+.+|+.+++.+     .||||+++++++++++.+
T Consensus         6 dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-----~hp~Iv~l~~~~~~~~~~   80 (337)
T d1o6la_           6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-----RHPFLTALKYAFQTHDRL   80 (337)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-----CCTTBCCEEEEEECSSEE
T ss_pred             hcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhC-----CCCCEEEEEeeecccccc
Confidence            588999999999999999999999999999999743    22345677888888887     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ ||+|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||+                    
T Consensus        81 ~iv~ey~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl--------------------  138 (337)
T d1o6la_          81 CFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML--------------------  138 (337)
T ss_dssp             EEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE--------------------
T ss_pred             ccceeccCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEe--------------------
Confidence            9999999 999999998865  68999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                             +.++.+||+|||.|+......   ...+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+..
T Consensus       139 -------~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~  211 (337)
T d1o6la_         139 -------DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE  211 (337)
T ss_dssp             -------CTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             -------cCCCCEEEeecccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHH
Confidence                   566678888888887543322   3468999999999999999999999999999999999999999988877


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.......|                                                 ...++++++||++||++
T Consensus       212 ~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~dli~~~L~~  242 (337)
T d1o6la_         212 RLFELILMEEIRFP-------------------------------------------------RTLSPEAKSLLAGLLKK  242 (337)
T ss_dssp             HHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHhcCCCCCC-------------------------------------------------ccCCHHHHHHHHhhccC
Confidence            66655544332222                                                 23678899999999999


Q ss_pred             CCCCCcC-----HHHHhcCCCCCCCC
Q 017021          356 DPTDRLT-----AREALRHPFFTRDH  376 (379)
Q Consensus       356 dP~~Rpt-----a~e~l~hp~f~~~~  376 (379)
                      ||.+|++     ++|+++||||++.+
T Consensus       243 dP~~R~~~~~~~~~eil~Hp~f~~i~  268 (337)
T d1o6la_         243 DPKQRLGGGPSDAKEVMEHRFFLSIN  268 (337)
T ss_dssp             STTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             CchhhcccccccHHHHHcCcccccCC
Confidence            9999994     99999999998753

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.4e-55  Score=406.03  Aligned_cols=251  Identities=25%  Similarity=0.402  Sum_probs=219.1

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      ..|++.++||+|+||+||+|+++.+|+.||+|+++..    ......+.+|+.+++.+     .||||+++++++.+++.
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~   78 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-----THPFIIRMWGTFQDAQQ   78 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-----CBTTBCCEEEEEECSSE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhc-----cCcChhheeeeEeeCCe
Confidence            4689999999999999999999999999999999742    23345667888888887     78999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .|+||||+ |++|..++....  .+++..++.++.||+.||+|||++||+||||||+|||+                   
T Consensus        79 ~~ivmE~~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl-------------------  137 (316)
T d1fota_          79 IFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL-------------------  137 (316)
T ss_dssp             EEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE-------------------
T ss_pred             eeeEeeecCCccccccccccc--cccccHHHHHHHHHHHhhhhhccCcEEccccCchheeE-------------------
Confidence            99999999 899999988765  68899999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                              +.++.+||+|||.|..........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus       138 --------~~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  209 (316)
T d1fota_         138 --------DKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT  209 (316)
T ss_dssp             --------CTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             --------cCCCCEEEecCccceEeccccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH
Confidence                    566778999999888766666677899999999999999999999999999999999999999998877776


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.+.....|                                                 ...++++.++|.+||+.||
T Consensus       210 ~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~~L~~dp  240 (316)
T d1fota_         210 YEKILNAELRFP-------------------------------------------------PFFNEDVKDLLSRLITRDL  240 (316)
T ss_dssp             HHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHHTCSCT
T ss_pred             HHHHHcCCCCCC-------------------------------------------------CCCCHHHHHHHHHHhhhCH
Confidence            665544332222                                                 1356789999999999999


Q ss_pred             CCCc-----CHHHHhcCCCCCCCC
Q 017021          358 TDRL-----TAREALRHPFFTRDH  376 (379)
Q Consensus       358 ~~Rp-----ta~e~l~hp~f~~~~  376 (379)
                      .+|+     |++|+++||||++..
T Consensus       241 ~~R~~~~r~t~~~il~Hp~f~~i~  264 (316)
T d1fota_         241 SQRLGNLQNGTEDVKNHPWFKEVV  264 (316)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred             HhccccchhhHHHHHcCcccccCC
Confidence            9996     999999999998753

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-55  Score=407.90  Aligned_cols=256  Identities=22%  Similarity=0.386  Sum_probs=223.0

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  123 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~  123 (379)
                      .|++.+.||+|+||+||+|.++.+|+.||+|+++........+.+|+.++..+     .|+||+++++++++++.+|+||
T Consensus         6 rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l-----~HpnIv~~~~~~~~~~~~~lvm   80 (321)
T d1tkia_           6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-----RHRNILHLHESFESMEELVMIF   80 (321)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHS-----CCTTBCCEEEEEEETTEEEEEE
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhC-----CCCCCCeEEEEEEECCEEEEEE
Confidence            48899999999999999999999999999999986665566778899999888     7899999999999999999999


Q ss_pred             eCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          124 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       124 e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      ||| |++|.+++...+ ..+++..+..++.||+.||+|||+.||+||||||+|||++.                      
T Consensus        81 E~~~gg~L~~~i~~~~-~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~----------------------  137 (321)
T d1tkia_          81 EFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT----------------------  137 (321)
T ss_dssp             CCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS----------------------
T ss_pred             ecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecC----------------------
Confidence            999 899999997654 35899999999999999999999999999999999999953                      


Q ss_pred             ccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHHHHH
Q 017021          203 KRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  280 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~~~~  280 (379)
                         +....++|+|||.+.......  ....||+.|+|||.+.+..++.++|||||||++|+|++|+.||...+..+....
T Consensus       138 ---~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~  214 (321)
T d1tkia_         138 ---RRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN  214 (321)
T ss_dssp             ---SSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred             ---CCceEEEEcccchhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence               244578999999987654433  345789999999999999999999999999999999999999998888777777


Q ss_pred             HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCC
Q 017021          281 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  360 (379)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  360 (379)
                      +.+....++...                                             +...++++++||.+||+.||.+|
T Consensus       215 i~~~~~~~~~~~---------------------------------------------~~~~s~~~~~li~~~L~~dp~~R  249 (321)
T d1tkia_         215 IMNAEYTFDEEA---------------------------------------------FKEISIEAMDFVDRLLVKERKSR  249 (321)
T ss_dssp             HHHTCCCCCHHH---------------------------------------------HTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             HHhCCCCCChhh---------------------------------------------ccCCCHHHHHHHHHHccCChhHC
Confidence            666554444432                                             23467889999999999999999


Q ss_pred             cCHHHHhcCCCCCCC
Q 017021          361 LTAREALRHPFFTRD  375 (379)
Q Consensus       361 pta~e~l~hp~f~~~  375 (379)
                      ||++|+++||||++.
T Consensus       250 ~s~~eil~hp~~~~~  264 (321)
T d1tkia_         250 MTASEALQHPWLKQK  264 (321)
T ss_dssp             CCHHHHHHSHHHHSC
T ss_pred             cCHHHHhcCHhhccC
Confidence            999999999999754

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-56  Score=398.92  Aligned_cols=250  Identities=22%  Similarity=0.332  Sum_probs=198.8

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee--cc
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--RN  117 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~--~~  117 (379)
                      ..|++.+.||+|+||+||+|+++.+|+.||+|++...   +.....+.+|+.++.++     .||||+++++++.+  ++
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~~   78 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-----KHPNIVRYYDRIIDRTNT   78 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSC-----CCTTBCCEEEEEEC----
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHC-----CCCCEeeEEEEEEeCCCC
Confidence            4689999999999999999999999999999998643   23345567788887777     78999999998854  56


Q ss_pred             eEEEEEeCC-CCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcC-----CcccCCCCCcEEEecccccccCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLC-----MIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-----iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                      .+|+||||| +|+|.+++.+.  ....+++..++.++.||+.||.|||++|     |+||||||+|||+           
T Consensus        79 ~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll-----------  147 (269)
T d2java1          79 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL-----------  147 (269)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEE-----------
T ss_pred             EEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCc-----------
Confidence            789999999 89999998642  2246999999999999999999999977     9999999999999           


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCC
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE  266 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~  266 (379)
                                      +.++.+||+|||.|.......   ....||+.|+|||++.+..++.++|||||||++|+|++|+
T Consensus       148 ----------------~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~  211 (269)
T d2java1         148 ----------------DGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM  211 (269)
T ss_dssp             ----------------CTTSCEEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             ----------------CCCCcEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCC
Confidence                            556778888888887544332   3467999999999999999999999999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||.+.+..+....+.....+.                                                .+..+++++.
T Consensus       212 ~Pf~~~~~~~~~~~i~~~~~~~------------------------------------------------~~~~~s~~l~  243 (269)
T d2java1         212 PPFTAFSQKELAGKIREGKFRR------------------------------------------------IPYRYSDELN  243 (269)
T ss_dssp             CSCCCSSHHHHHHHHHHTCCCC------------------------------------------------CCTTSCHHHH
T ss_pred             CCCCCCCHHHHHHHHHcCCCCC------------------------------------------------CCcccCHHHH
Confidence            9998877666555443321110                                                0123677899


Q ss_pred             HHHhhccccCCCCCcCHHHHhcCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREALRHPFF  372 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~l~hp~f  372 (379)
                      +||++||+.||.+|||++|+++|||+
T Consensus       244 ~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         244 EIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            99999999999999999999999996

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.6e-55  Score=408.59  Aligned_cols=251  Identities=26%  Similarity=0.406  Sum_probs=219.2

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      -.|+++++||+|+||.||+|+++.+|+.||||++...    ......+.+|+.++..+     .|+||+++++++.+...
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~~~~~~~~~~~  115 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSN  115 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSSE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHc-----CCCcEeecccccccccc
Confidence            3689999999999999999999999999999999632    22345567888888877     78999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      .++||||+ +++|.+.+...+  .+++..++.++.||+.||.|||++||+||||||+|||+                   
T Consensus       116 ~~~v~e~~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl-------------------  174 (350)
T d1rdqe_         116 LYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-------------------  174 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE-------------------
T ss_pred             cccccccccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHccc-------------------
Confidence            99999999 999999998765  69999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                              +.++.+||+|||+|+..........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.
T Consensus       175 --------~~~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  246 (350)
T d1rdqe_         175 --------DQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI  246 (350)
T ss_dssp             --------CTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             --------CCCCCEEeeeceeeeecccccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHH
Confidence                    566778999999988776666677899999999999999999999999999999999999999998777666


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.......|                                                 ...++++.+||++||+.||
T Consensus       247 ~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~~L~~dP  277 (350)
T d1rdqe_         247 YEKIVSGKVRFP-------------------------------------------------SHFSSDLKDLLRNLLQVDL  277 (350)
T ss_dssp             HHHHHHCCCCCC-------------------------------------------------TTCCHHHHHHHHHHSCSCT
T ss_pred             HHHHhcCCCCCC-------------------------------------------------ccCCHHHHHHHHHHhhhCH
Confidence            665544332222                                                 1367789999999999999


Q ss_pred             CCCc-----CHHHHhcCCCCCCCC
Q 017021          358 TDRL-----TAREALRHPFFTRDH  376 (379)
Q Consensus       358 ~~Rp-----ta~e~l~hp~f~~~~  376 (379)
                      .+|+     |++|+++||||+..+
T Consensus       278 ~kR~~~~r~t~~ell~Hp~f~~~~  301 (350)
T d1rdqe_         278 TKRFGNLKNGVNDIKNHKWFATTD  301 (350)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred             HhccccccccHHHHHcCccccCCC
Confidence            9995     999999999998754

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.3e-55  Score=404.72  Aligned_cols=252  Identities=26%  Similarity=0.356  Sum_probs=208.4

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  117 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~  117 (379)
                      ...|++.++||+|+||+||+|+++.+|+.||||+++...    .....+.+|+.++.++     .|+||+++++++.+++
T Consensus        14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~~~~~~~~~~   88 (309)
T d1u5ra_          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-----RHPNTIQYRGCYLREH   88 (309)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEETT
T ss_pred             HHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHC-----CCCCEeeEEEEEEECC
Confidence            456888999999999999999999999999999997432    2234567788888887     7899999999999999


Q ss_pred             eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 ~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                      .+|+||||| +++|..++....  .+++..++.++.||+.||.|||++||+||||||+|||++                 
T Consensus        89 ~~~iv~E~~~~g~l~~~~~~~~--~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~-----------------  149 (309)
T d1u5ra_          89 TAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS-----------------  149 (309)
T ss_dssp             EEEEEEECCSEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE-----------------
T ss_pred             EEEEEEEecCCCchHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEC-----------------
Confidence            999999999 777766655543  699999999999999999999999999999999999994                 


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhC---CCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                                .++.+||+|||.|..... .....||+.|+|||++.+   ..|+.++|||||||++|+|++|..||.+.+
T Consensus       150 ----------~~~~~Kl~DFG~a~~~~~-~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~  218 (309)
T d1u5ra_         150 ----------EPGLVKLGDFGSASIMAP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  218 (309)
T ss_dssp             ----------TTTEEEECCCTTCBSSSS-BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             ----------CCCCEEEeecccccccCC-CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCC
Confidence                      455677888887765433 234579999999999864   358899999999999999999999998877


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.+...+.+.                                               ...+++.+.+||++||
T Consensus       219 ~~~~~~~i~~~~~~~~~-----------------------------------------------~~~~s~~~~~li~~~L  251 (309)
T d1u5ra_         219 AMSALYHIAQNESPALQ-----------------------------------------------SGHWSEYFRNFVDSCL  251 (309)
T ss_dssp             HHHHHHHHHHSCCCCCS-----------------------------------------------CTTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCC-----------------------------------------------CCCCCHHHHHHHHHHC
Confidence            66655444432211110                                               1236778999999999


Q ss_pred             ccCCCCCcCHHHHhcCCCCCCC
Q 017021          354 RYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +.||.+|||++|+|+||||.+.
T Consensus       252 ~~dP~~Rpt~~ell~Hp~~~~~  273 (309)
T d1u5ra_         252 QKIPQDRPTSEVLLKHRFVLRE  273 (309)
T ss_dssp             CSSGGGSCCHHHHTTCHHHHSC
T ss_pred             cCChhHCcCHHHHHhCHHhcCC
Confidence            9999999999999999999764

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-55  Score=398.39  Aligned_cols=281  Identities=32%  Similarity=0.501  Sum_probs=226.3

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|+++++||+|+||+||+|+++.+|+.||+|+++...   .....+.+|+.+++++     +|+||+++++++.+++.+|
T Consensus         3 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-----~Hp~Iv~~~~~~~~~~~~~   77 (298)
T d1gz8a_           3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHPNIVKLLDVIHTENKLY   77 (298)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTC-----CCTTBCCEEEEEEETTEEE
T ss_pred             CCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhC-----CCCcEEEecccccccccee
Confidence            5889999999999999999999999999999996432   2356677899998887     7899999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      +||||+++++.+.+.......+++..+..++.||+.||+|||++||+||||||+|||+                      
T Consensus        78 iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~----------------------  135 (298)
T d1gz8a_          78 LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----------------------  135 (298)
T ss_dssp             EEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----------------------
T ss_pred             EEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheee----------------------
Confidence            9999997777777766655679999999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCC-CCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                           +.+..+||+|||.|.......   ....||+.|+|||.+.... ++.++|||||||++|+|++|+.||.+.+..+
T Consensus       136 -----~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~  210 (298)
T d1gz8a_         136 -----NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID  210 (298)
T ss_dssp             -----CTTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             -----cccCcceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHH
Confidence                 566678888998886544332   3457999999999987766 4789999999999999999999999988888


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.+..+.+.+..++.+.......     ...+...               ...........+.++.+||.+||+.|
T Consensus       211 ~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---------------~~~~~~~~~~~s~~~~dll~~mL~~d  270 (298)
T d1gz8a_         211 QLFRIFRTLGTPDEVVWPGVTSMPDYK-----PSFPKWA---------------RQDFSKVVPPLDEDGRSLLSQMLHYD  270 (298)
T ss_dssp             HHHHHHHHHCCCCTTTSTTGGGSTTCC-----TTSCCCC---------------CCCHHHHSTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHHHHhcCCCchhhccccccccccc-----ccccccc---------------ccchhhhccCCCHHHHHHHHHHccCC
Confidence            888888888777665544322211100     0011000               01111223457789999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~~~  376 (379)
                      |++||||+|+|+||||++..
T Consensus       271 P~~R~t~~ell~H~ff~~~~  290 (298)
T d1gz8a_         271 PNKRISAKAALAHPFFQDVT  290 (298)
T ss_dssp             TTTSCCHHHHHTSGGGTTCC
T ss_pred             hhHCcCHHHHhCCHhhccCC
Confidence            99999999999999998643

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-55  Score=401.31  Aligned_cols=275  Identities=26%  Similarity=0.469  Sum_probs=214.9

Q ss_pred             hhccccccceeEEEEEecCCCceEEEEEeeccc------hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           48 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        48 ~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ++.||+|+||+||+|+++.+|+.||||+++...      .....+.+|+.+++++     .|+||+++++++.+++++|+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l-----~hpnIv~~~~~~~~~~~~~i   77 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-----SHPNIIGLLDAFGHKSNISL   77 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-----CCTTBCCEEEEECCTTCCEE
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhC-----CCCCEeEEEeeeccCCceee
Confidence            478999999999999999999999999986332      1234577899999998     78999999999999999999


Q ss_pred             EEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          122 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      ||||+.+++...+.... ..+++..+..++.||+.||+|||++||+||||||+|||+                       
T Consensus        78 vmE~~~~~~~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli-----------------------  133 (299)
T d1ua2a_          78 VFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL-----------------------  133 (299)
T ss_dssp             EEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE-----------------------
T ss_pred             hhhhhcchHHhhhhhcc-cCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEe-----------------------
Confidence            99999444444443322 368999999999999999999999999999999999999                       


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCchHHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEH  277 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~~  277 (379)
                          +..+.+||+|||.+.......   ...+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.
T Consensus       134 ----~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~  209 (299)
T d1ua2a_         134 ----DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ  209 (299)
T ss_dssp             ----CTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ----cCCCccccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHH
Confidence                566678888888886544332   345799999999998654 579999999999999999999999999999998


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.+..+.++...+............   ...+             ..     .........++++.+||.+||+.||
T Consensus       210 l~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------~~-----~~~~~~~~~s~~~~dll~~~L~~dP  268 (299)
T d1ua2a_         210 LTRIFETLGTPTEEQWPDMCSLPDYVTF---KSFP-------------GI-----PLHHIFSAAGDDLLDLIQGLFLFNP  268 (299)
T ss_dssp             HHHHHHHHCCCCTTTSSSTTSSTTCCCC---CCCC-------------CC-----CHHHHCTTCCHHHHHHHHHHHCSST
T ss_pred             HHHHHHhcCCCChhhccchhccchhhhh---ccCC-------------CC-----ChHHhcccCCHHHHHHHHHHccCCh
Confidence            8888888887776543322111100000   0000             00     0112234567899999999999999


Q ss_pred             CCCcCHHHHhcCCCCCCCC
Q 017021          358 TDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       358 ~~Rpta~e~l~hp~f~~~~  376 (379)
                      ++||||+|+|+||||++..
T Consensus       269 ~~R~sa~e~L~Hp~f~~~p  287 (299)
T d1ua2a_         269 CARITATQALKMKYFSNRP  287 (299)
T ss_dssp             TTSCCHHHHHTSGGGTSSS
T ss_pred             hhCcCHHHHhCCHhhCCCC
Confidence            9999999999999998753

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=2.4e-54  Score=390.43  Aligned_cols=254  Identities=29%  Similarity=0.494  Sum_probs=213.4

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----------hhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      ..|++.+.||+|+||+||+|+++.+|+.||+|+++...          .....+.+|+.+++++    ..|+||++++++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l----~~hpnIv~~~~~   78 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV----SGHPNIIQLKDT   78 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHH----TTCTTBCCEEEE
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEEee
Confidence            36889999999999999999999999999999986432          1234577899999998    237999999999


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCcc
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  191 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~  191 (379)
                      +.+++.+|+||||+ +++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+||++             
T Consensus        79 ~~~~~~~~ivmE~~~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill-------------  143 (277)
T d1phka_          79 YETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL-------------  143 (277)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE-------------
T ss_pred             cccCcceEEEEEcCCCchHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEE-------------
Confidence            99999999999999 899999998765  69999999999999999999999999999999999999             


Q ss_pred             CCCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhC------CCCCCccchHhHHHHHHHHH
Q 017021          192 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG------LGWTYPCDIWSVGCILVELC  263 (379)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~------~~~~~~sDvwSlG~il~~l~  263 (379)
                                    +.++.+||+|||.+.......  ....||+.|+|||.+.+      ..++.++||||+||++|+|+
T Consensus       144 --------------~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml  209 (277)
T d1phka_         144 --------------DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL  209 (277)
T ss_dssp             --------------CTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHH
T ss_pred             --------------cCCCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhc
Confidence                          566678888888887544432  34579999999999853      34788999999999999999


Q ss_pred             hCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchh
Q 017021          264 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  343 (379)
Q Consensus       264 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (379)
                      +|+.||.+.+..+....+.+....++..                                             .....++
T Consensus       210 ~g~~Pf~~~~~~~~~~~i~~~~~~~~~~---------------------------------------------~~~~~s~  244 (277)
T d1phka_         210 AGSPPFWHRKQMLMLRMIMSGNYQFGSP---------------------------------------------EWDDYSD  244 (277)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHTCCCCCTT---------------------------------------------TGGGSCH
T ss_pred             cCCCCCCCCCHHHHHHHHHhCCCCCCCc---------------------------------------------ccccCCH
Confidence            9999999877766655554432221110                                             1224678


Q ss_pred             HHHHHHhhccccCCCCCcCHHHHhcCCCCCC
Q 017021          344 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       344 ~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      ++++||.+||+.||++|||++|+|+||||++
T Consensus       245 ~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         245 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence            9999999999999999999999999999975

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-54  Score=394.42  Aligned_cols=284  Identities=27%  Similarity=0.449  Sum_probs=221.8

Q ss_pred             hhhhhhhhccccccceeEEEEEecCC-CceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee--
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--  115 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~-~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~--  115 (379)
                      ...|+++++||+|+||+||+|++..+ ++.||||+++..   ........+|+.+++.+..  .+|+||+++++++..  
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~--~~HpnIv~~~~~~~~~~   83 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET--FEHPNVVRLFDVCTVSR   83 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHH--TCCTTBCCEEEEEEEEE
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhh--cCCCCcceeeeeecccc
Confidence            45799999999999999999999765 678999998642   2233456678888887754  267999999998853  


Q ss_pred             ---cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccC
Q 017021          116 ---RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  192 (379)
Q Consensus       116 ---~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~  192 (379)
                         ....+++||++.+++...........+++..++.++.|++.||+|||++||+||||||+|||+              
T Consensus        84 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi--------------  149 (305)
T d1blxa_          84 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV--------------  149 (305)
T ss_dssp             CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE--------------
T ss_pred             cccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEE--------------
Confidence               457999999995555555555544579999999999999999999999999999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          193 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                                   +..+.++|+|||.+.......  ....||+.|+|||++.+..|+.++|||||||++|+|++|+.||.
T Consensus       150 -------------~~~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~  216 (305)
T d1blxa_         150 -------------TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR  216 (305)
T ss_dssp             -------------CTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             -------------cCCCCeeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCC
Confidence                         455667777777765433222  34679999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      +.+..+....+.+..+.++...++.............                 ..     ..........++.+.+||+
T Consensus       217 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~-----~~~~~~~~~~s~~~~dli~  274 (305)
T d1blxa_         217 GSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSK-----------------SA-----QPIEKFVTDIDELGKDLLL  274 (305)
T ss_dssp             CSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCC-----------------CC-----CCGGGTCCSCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhhCCCchhcccccccchhhhhccc-----------------cc-----cchhhccccCCHHHHHHHH
Confidence            9998888888888888776654432211111110000                 00     0112233456788999999


Q ss_pred             hccccCCCCCcCHHHHhcCCCCCCCC
Q 017021          351 GLLRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +||++||++||||+|+|+||||++.+
T Consensus       275 ~mL~~dP~~R~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         275 KCLTFNPAKRISAYSALSHPYFQDLE  300 (305)
T ss_dssp             HHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHCcCChhHCcCHHHHhcChhhcCch
Confidence            99999999999999999999998764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-54  Score=398.11  Aligned_cols=251  Identities=25%  Similarity=0.397  Sum_probs=211.1

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.++||+|+||+||+|+++.+|+.||+|+++..    .........|..++.+.    ..||||+++++++.+++.+
T Consensus         3 dy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~----~~hp~Iv~~~~~~~~~~~~   78 (320)
T d1xjda_           3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA----WEHPFLTHMFCTFQTKENL   78 (320)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHH----TTCTTBCCEEEEEECSSEE
T ss_pred             CeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHh----CCCCcEEEEEEEEccCCce
Confidence            588999999999999999999999999999999742    22234455566655432    2789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +|+|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||+                    
T Consensus        79 yivmEy~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~--------------------  136 (320)
T d1xjda_          79 FFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL--------------------  136 (320)
T ss_dssp             EEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE--------------------
T ss_pred             eEEEeecCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceee--------------------
Confidence            9999999 999999998765  68999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                             +..+.++|+|||.+.......   ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..
T Consensus       137 -------~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~  209 (320)
T d1xjda_         137 -------DKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE  209 (320)
T ss_dssp             -------CTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             -------cCCCceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHH
Confidence                   566677888888876443322   3357999999999999999999999999999999999999999988777


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.......|                                                 ...++++.+||++||+.
T Consensus       210 ~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~dli~~~L~~  240 (320)
T d1xjda_         210 ELFHSIRMDNPFYP-------------------------------------------------RWLEKEAKDLLVKLFVR  240 (320)
T ss_dssp             HHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHHSCS
T ss_pred             HHHHHHHcCCCCCC-------------------------------------------------ccCCHHHHHHHHHhccc
Confidence            76655544322222                                                 13567899999999999


Q ss_pred             CCCCCcCHH-HHhcCCCCCCCC
Q 017021          356 DPTDRLTAR-EALRHPFFTRDH  376 (379)
Q Consensus       356 dP~~Rpta~-e~l~hp~f~~~~  376 (379)
                      ||++|||+. |+++||||++.+
T Consensus       241 dP~~R~s~~~~l~~hpff~~~~  262 (320)
T d1xjda_         241 EPEKRLGVRGDIRQHPLFREIN  262 (320)
T ss_dssp             SGGGSBTTBSCGGGSGGGTTCC
T ss_pred             CCCCCcCHHHHHHhCchhccCC
Confidence            999999995 899999998753

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=9e-54  Score=401.19  Aligned_cols=256  Identities=25%  Similarity=0.406  Sum_probs=206.2

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc----hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      .|++.++||+|+||.||+|+++.+|+.||+|++....    .....+.+|...+..+.+  .+||||+++++++.+++.+
T Consensus         5 dy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~--~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST--GDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSS--SCCTTBCCEEEEEECSSEE
T ss_pred             hCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhc--CCCCcEEEEEEEEEECCEE
Confidence            5889999999999999999999999999999986321    222334455554544422  2689999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ |++|.+++.+..  .+++..+..++.||+.||.|||++||+||||||+|||+                    
T Consensus        83 ~ivmE~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl--------------------  140 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL--------------------  140 (364)
T ss_dssp             EEEECCCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE--------------------
T ss_pred             EEEEEecCCCcHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEE--------------------
Confidence            9999999 899999998765  68999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCC-CCcccccCCccchhhhh-CCCCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                             +.++.+||+|||+|...... .....||+.|+|||++. +..++.++|||||||++|+|++|+.||...+..+
T Consensus       141 -------~~~g~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~  213 (364)
T d1omwa3         141 -------DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD  213 (364)
T ss_dssp             -------CSSSCEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSC
T ss_pred             -------cCCCcEEEeeeceeeecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHH
Confidence                   55667888888888754433 34467999999999986 4568999999999999999999999998754433


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ............+                    .                          .++..++++++||.+||+.|
T Consensus       214 ~~~~~~~~~~~~~--------------------~--------------------------~~~~~s~~~~~li~~~L~~d  247 (364)
T d1omwa3         214 KHEIDRMTLTMAV--------------------E--------------------------LPDSFSPELRSLLEGLLQRD  247 (364)
T ss_dssp             HHHHHHHSSSCCC--------------------C--------------------------CCSSSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHhcccCCC--------------------C--------------------------CCCCCCHHHHHHHHHHcccC
Confidence            2222222111111                    1                          11246788999999999999


Q ss_pred             CCCCcC-----HHHHhcCCCCCCCC
Q 017021          357 PTDRLT-----AREALRHPFFTRDH  376 (379)
Q Consensus       357 P~~Rpt-----a~e~l~hp~f~~~~  376 (379)
                      |.+|||     |+|+++||||++.+
T Consensus       248 P~~R~t~~~~~a~eil~Hp~f~~i~  272 (364)
T d1omwa3         248 VNRRLGCLGRGAQEVKESPFFRSLD  272 (364)
T ss_dssp             TTTSTTTSSSTHHHHHTSGGGTTCC
T ss_pred             HHHhCCCcccCHHHHHcCccccCCC
Confidence            999999     89999999998753

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-53  Score=399.00  Aligned_cols=279  Identities=28%  Similarity=0.484  Sum_probs=226.2

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc--
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN--  117 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~--  117 (379)
                      ..|+++++||+|+||+||+|.++.+|+.||||+++..   ......+.+|+.++.++     .|+|++++++++...+  
T Consensus        18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-----~hpniv~l~~~~~~~~~~   92 (346)
T d1cm8a_          18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-----RHENVIGLLDVFTPDETL   92 (346)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-----CBTTBCCCSEEECSCSST
T ss_pred             CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhc-----CCCCeeEEEEEeccCccc
Confidence            4789999999999999999999999999999999742   23345677899999888     7899999999987654  


Q ss_pred             ----eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          118 ----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       118 ----~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                          ++|+||||++.+|..++...   .+++..++.++.||+.||+|||++||+||||||+|||+               
T Consensus        93 ~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~---------------  154 (346)
T d1cm8a_          93 DDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---------------  154 (346)
T ss_dssp             TTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---------------
T ss_pred             cccceEEEEEecccccHHHHHHhc---cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhc---------------
Confidence                57999999998998888764   49999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                  +.++.++++|||.|...........||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.
T Consensus       155 ------------~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~  222 (346)
T d1cm8a_         155 ------------NEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS  222 (346)
T ss_dssp             ------------CTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ------------ccccccccccccceeccCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCC
Confidence                        666778899999988777776777899999999998764 5689999999999999999999999999


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +..+....+....+.+|...+.............+.......                  .........++.+.+||.+|
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~s~~~~dli~~m  284 (346)
T d1cm8a_         223 DHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKK------------------DFASILTNASPLAVNLLEKM  284 (346)
T ss_dssp             SHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCC------------------CGGGTCTTCCHHHHHHHHHH
T ss_pred             ChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCccccc------------------chHHhccCCCHHHHHHHHHH
Confidence            988888899999999998877664433322222211111110                  01112235678899999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      |+.||++||||+|+|+||||++
T Consensus       285 L~~dP~~R~ta~eiL~Hp~f~~  306 (346)
T d1cm8a_         285 LVLDAEQRVTAGEALAHPYFES  306 (346)
T ss_dssp             SCSSTTTSCCHHHHHHSGGGTT
T ss_pred             CcCChhHCcCHHHHhcChhhCc
Confidence            9999999999999999999986

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-54  Score=401.60  Aligned_cols=260  Identities=27%  Similarity=0.470  Sum_probs=207.6

Q ss_pred             hhhhhh-ccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee----cce
Q 017021           44 ADKIHS-KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----RNH  118 (379)
Q Consensus        44 ~y~i~~-~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~----~~~  118 (379)
                      .|+|.. .||+|+||+||+|+++.+++.||||+++..    ....+|+.++.++    .+|+||++++++|++    ..+
T Consensus        12 ~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~----~~~~~E~~~~~~~----~~hpnIv~l~~~~~~~~~~~~~   83 (335)
T d2ozaa1          12 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRA----SQCPHIVRIVDVYENLYAGRKC   83 (335)
T ss_dssp             TEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHH----TTSTTBCCEEEEEEEEETTEEE
T ss_pred             CEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc----HHHHHHHHHHHHh----cCCCCCCeEEEEEeecccCCCE
Confidence            577765 599999999999999999999999999743    3455688877665    368999999999875    467


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  197 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~  197 (379)
                      +|+||||| ||+|.+++...+...+++..++.++.||+.||+|||+.||+||||||+||+++..                
T Consensus        84 ~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~----------------  147 (335)
T d2ozaa1          84 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK----------------  147 (335)
T ss_dssp             EEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCS----------------
T ss_pred             EEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccc----------------
Confidence            99999999 8999999987665679999999999999999999999999999999999999532                


Q ss_pred             CCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCchH
Q 017021          198 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  275 (379)
Q Consensus       198 ~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~  275 (379)
                              ...+.+||+|||+|.......  ....||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+..
T Consensus       148 --------~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~  219 (335)
T d2ozaa1         148 --------RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL  219 (335)
T ss_dssp             --------STTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC
T ss_pred             --------cccccccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHH
Confidence                    345679999999987544332  4567999999999999989999999999999999999999999875543


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+...                   +..+...+|.                      ..+...++++.+||++||+.
T Consensus       220 ~~~~~~~~~-------------------i~~~~~~~~~----------------------~~~~~~s~~~~~li~~~L~~  258 (335)
T d2ozaa1         220 AISPGMKTR-------------------IRMGQYEFPN----------------------PEWSEVSEEVKMLIRNLLKT  258 (335)
T ss_dssp             --------C-------------------CCSCSSSCCT----------------------THHHHSCHHHHHHHHHHSCS
T ss_pred             HHHHHHHHH-------------------HhcCCCCCCC----------------------cccccCCHHHHHHHHHHccC
Confidence            332222111                   1111111111                      11224678899999999999


Q ss_pred             CCCCCcCHHHHhcCCCCCCCC
Q 017021          356 DPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       356 dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      ||++|||++|+++||||.+..
T Consensus       259 dP~~R~s~~eil~hp~~~~~~  279 (335)
T d2ozaa1         259 EPTQRMTITEFMNHPWIMQST  279 (335)
T ss_dssp             STTTSCCHHHHHHSHHHHTTT
T ss_pred             ChhHCcCHHHHHcCHHhhCCC
Confidence            999999999999999997653

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.6e-53  Score=384.84  Aligned_cols=277  Identities=28%  Similarity=0.437  Sum_probs=218.7

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|++.++||+|+||+||+|+++ +|+.||+|+++..   ......+.+|+.++.++     +|+||+++++++..++..+
T Consensus         3 ~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~~~~~~~~~~~~~   76 (286)
T d1ob3a_           3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKEL-----KHSNIVKLYDVIHTKKRLV   76 (286)
T ss_dssp             SEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-----CCTTBCCEEEEEECSSCEE
T ss_pred             CceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhC-----CCCcEEeeeeecccCCcee
Confidence            5889999999999999999986 7899999999643   23346777899988887     7899999999999999999


Q ss_pred             EEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          121 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       121 lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      ++|+++++++...+.... ..+++..+..++.||+.||+|||+.||+||||||+|||+                      
T Consensus        77 i~~e~~~~~~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll----------------------  133 (286)
T d1ob3a_          77 LVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI----------------------  133 (286)
T ss_dssp             EEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----------------------
T ss_pred             EEEEeehhhhHHHHHhhc-CCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeE----------------------
Confidence            999999655555554433 369999999999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCchHH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLE  276 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~~~~  276 (379)
                           +.++.+||+|||.+.......   ....||+.|+|||.+.+. .++.++|||||||++|+|++|+.||.+.+..+
T Consensus       134 -----~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~  208 (286)
T d1ob3a_         134 -----NREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD  208 (286)
T ss_dssp             -----CTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             -----cCCCCEEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHH
Confidence                 566778888888886544332   334689999999998765 46899999999999999999999999988888


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ...++.+..+.++...+..............   ...            ..     .........++++.|||++||+.|
T Consensus       209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------~~-----~~~~~~~~~s~~~~dli~~~L~~d  268 (286)
T d1ob3a_         209 QLMRIFRILGTPNSKNWPNVTELPKYDPNFT---VYE------------PL-----PWESFLKGLDESGIDLLSKMLKLD  268 (286)
T ss_dssp             HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCC---CCC------------CC-----CGGGTCCSCCHHHHHHHHHHTCSS
T ss_pred             HHHHHHHhhCCCChhhccchhhhhhcccccc---ccc------------Cc-----chhhhcccCCHHHHHHHHHHccCC
Confidence            8888888888777665544333221111000   000            00     011223456788999999999999


Q ss_pred             CCCCcCHHHHhcCCCCCC
Q 017021          357 PTDRLTAREALRHPFFTR  374 (379)
Q Consensus       357 P~~Rpta~e~l~hp~f~~  374 (379)
                      |++||||+|+|+||||++
T Consensus       269 P~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         269 PNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             TTTSCCHHHHHTSGGGGC
T ss_pred             hhHCcCHHHHhcCcccCc
Confidence            999999999999999975

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-53  Score=383.25  Aligned_cols=247  Identities=25%  Similarity=0.456  Sum_probs=203.6

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc-------hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-------~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      .|+|.+.||+|+||+||+|+++.+|+.||+|+++...       .....+.+|+.++.++.+   .|+||++++++++++
T Consensus         5 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~---~h~nIv~~~~~~~~~   81 (273)
T d1xwsa_           5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS---GFSGVIRLLDWFERP   81 (273)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS---SSCSBCCEEEEEECS
T ss_pred             eEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhcc---CCCCccEEEEEEeeC
Confidence            5899999999999999999999999999999986421       112345679999998843   478999999999999


Q ss_pred             ceEEEEEeCC-C-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          117 NHICIVFEKL-G-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       117 ~~~~lv~e~~-~-~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      +..|+||||+ + +++.+++....  .+++..++.++.||+.||+|||++||+||||||+||+++.              
T Consensus        82 ~~~~lv~e~~~~~~~l~~~~~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~--------------  145 (273)
T d1xwsa_          82 DSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--------------  145 (273)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET--------------
T ss_pred             CeEEEEEEeccCcchHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEec--------------
Confidence            9999999999 4 58888887654  6999999999999999999999999999999999999952              


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC-CcccccCCccchhhhhCCCC-CCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                  ..+.++|+|||.|....... ....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...
T Consensus       146 ------------~~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~  213 (273)
T d1xwsa_         146 ------------NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD  213 (273)
T ss_dssp             ------------TTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred             ------------CCCeEEECccccceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc
Confidence                        23568888888886544333 44679999999999987665 57799999999999999999999752


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +.      +.+                       +...++                          ...++++++||++|
T Consensus       214 ~~------i~~-----------------------~~~~~~--------------------------~~~s~~~~~li~~~  238 (273)
T d1xwsa_         214 EE------IIR-----------------------GQVFFR--------------------------QRVSSECQHLIRWC  238 (273)
T ss_dssp             HH------HHH-----------------------CCCCCS--------------------------SCCCHHHHHHHHHH
T ss_pred             hH------Hhh-----------------------cccCCC--------------------------CCCCHHHHHHHHHH
Confidence            21      111                       011111                          23678899999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      |+.||++|||++|+++||||++..
T Consensus       239 L~~dp~~R~s~~eil~hp~~~~~~  262 (273)
T d1xwsa_         239 LALRPSDRPTFEEIQNHPWMQDVL  262 (273)
T ss_dssp             TCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             ccCCHhHCcCHHHHhcCHhhCCCC
Confidence            999999999999999999998754

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-52  Score=389.92  Aligned_cols=280  Identities=28%  Similarity=0.479  Sum_probs=219.9

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee------
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY------  115 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~------  115 (379)
                      ...|+.+++||+|+||+||+|+++.+|+.||||++.....   ...+|+.+++++     .|+|++++++++..      
T Consensus        19 ~~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l-----~h~niv~~~~~~~~~~~~~~   90 (350)
T d1q5ka_          19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKD   90 (350)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---SCCHHHHHHHHC-----CCTTBCCEEEEEEEC--CCS
T ss_pred             cCCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch---HHHHHHHHHHhc-----CCCCCCcEEEEEEecCccCC
Confidence            4478888999999999999999999999999999975432   334699999888     78999999998853      


Q ss_pred             cceEEEEEeCCCCCHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          116 RNHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       116 ~~~~~lv~e~~~~sL~~~l~~--~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      ..++|+||||+++++.+.+..  .....+++..++.++.||+.||+|||++||+||||||+|||++.             
T Consensus        91 ~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~-------------  157 (350)
T d1q5ka_          91 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-------------  157 (350)
T ss_dssp             CCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT-------------
T ss_pred             ceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEec-------------
Confidence            346899999996666555532  23346999999999999999999999999999999999999942             


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCC--CCcccccCCccchhhhhC-CCCCCccchHhHHHHHHHHHhCCCCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQ  270 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~~l~~g~~pf~  270 (379)
                                   ....+||+|||.+......  .....||+.|+|||.+.+ ..++.++|||||||++|+|++|+.||.
T Consensus       158 -------------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~  224 (350)
T d1q5ka_         158 -------------DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP  224 (350)
T ss_dssp             -------------TTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSC
T ss_pred             -------------CCCceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCC
Confidence                         2246889999988654332  344679999999998875 468999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHh
Q 017021          271 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  350 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  350 (379)
                      ..+..+....+.+..|.++.+.+...........      .+....          .    ..........++++.+||.
T Consensus       225 ~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~------~~~~~~----------~----~~~~~~~~~~s~~~~dLl~  284 (350)
T d1q5ka_         225 GDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK------FPQIKA----------H----PWTKVFRPRTPPEAIALCS  284 (350)
T ss_dssp             CSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCC------CCCCCC----------C----CGGGTSCTTSCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCChHHhhhhhccchhhcc------cccccc----------C----chhhhcccCCCHHHHHHHH
Confidence            9888888888889999988877665433221111      110000          0    0001112346778999999


Q ss_pred             hccccCCCCCcCHHHHhcCCCCCCC
Q 017021          351 GLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       351 ~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +||++||++||||+|+|+||||++.
T Consensus       285 ~mL~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         285 RLLEYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             HHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             HHccCChhHCcCHHHHhcCHhhccc
Confidence            9999999999999999999999763

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.5e-52  Score=379.32  Aligned_cols=256  Identities=20%  Similarity=0.292  Sum_probs=208.7

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      +....|++.++||+|+||+||+|.++.+++.||+|+++.+....+.+.+|+.+++++     .|+||+++++++.+++..
T Consensus        14 i~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~~   88 (287)
T d1opja_          14 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-----KHPNLVQLLGVCTREPPF   88 (287)
T ss_dssp             CCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSSSC
T ss_pred             ecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhC-----CCCCEecCCccEeeCCee
Confidence            455678889999999999999999999999999999987666677888999999998     789999999999999999


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      ++||||+ +|+|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++                   
T Consensus        89 ~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~-------------------  149 (287)
T d1opja_          89 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-------------------  149 (287)
T ss_dssp             EEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-------------------
T ss_pred             EEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEEC-------------------
Confidence            9999999 89999999876656799999999999999999999999999999999999994                   


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC-Cc
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT-HE  273 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~-~~  273 (379)
                              .++.+||+|||+|+......    ....||+.|+|||++.+..++.++|||||||++|+|++|..||.. .+
T Consensus       150 --------~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~  221 (287)
T d1opja_         150 --------ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID  221 (287)
T ss_dssp             --------GGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             --------CCCcEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcch
Confidence                    44556777777766543332    223578899999999999999999999999999999997666543 34


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.+...                      ...                          ++..++++.+||.+||
T Consensus       222 ~~~~~~~i~~~~~----------------------~~~--------------------------~~~~~~~l~~li~~cl  253 (287)
T d1opja_         222 LSQVYELLEKDYR----------------------MER--------------------------PEGCPEKVYELMRACW  253 (287)
T ss_dssp             HHHHHHHHHTTCC----------------------CCC--------------------------CTTCCHHHHHHHHHHT
T ss_pred             HHHHHHHHhcCCC----------------------CCC--------------------------CccchHHHHHHHHHHc
Confidence            3333322221110                      011                          1246778999999999


Q ss_pred             ccCCCCCcCHHHHhc--CCCCCCC
Q 017021          354 RYDPTDRLTAREALR--HPFFTRD  375 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~--hp~f~~~  375 (379)
                      +.||++|||++|+++  ..++++.
T Consensus       254 ~~dP~~Rps~~ei~~~L~~~~~~~  277 (287)
T d1opja_         254 QWNPSDRPSFAEIHQAFETMFQES  277 (287)
T ss_dssp             CSSGGGSCCHHHHHHHHHHTTSSS
T ss_pred             CCCHhHCcCHHHHHHHHHHHHHhC
Confidence            999999999999986  3455544

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-51  Score=386.18  Aligned_cols=288  Identities=25%  Similarity=0.400  Sum_probs=221.4

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee-----
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-----  115 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~-----  115 (379)
                      .|+++++||+|+||+||+|+++.+|+.||||++...   ......+.+|+.++.++     +|+||+++++++..     
T Consensus        18 ~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-----~hpnIv~~~~~f~~~~~~~   92 (355)
T d2b1pa1          18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-----NHKNIISLLNVFTPQKTLE   92 (355)
T ss_dssp             TEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCCSEEECSCCSTT
T ss_pred             CeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhc-----CCCCeeEEEEEEecccccc
Confidence            489999999999999999999999999999999743   23345677899998887     78999999999863     


Q ss_pred             -cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 -RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 -~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                       ..++|+||||+.+++.+.+..    .+++..++.++.||+.||.|||+.||+||||||+|||+                
T Consensus        93 ~~~~~~iv~Ey~~~~l~~~~~~----~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~----------------  152 (355)
T d2b1pa1          93 EFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----------------  152 (355)
T ss_dssp             TCCEEEEEEECCSEEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----------------
T ss_pred             cCceeEEEEeccchHHHHhhhc----CCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccc----------------
Confidence             468999999996666666532    58999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                 ..++.++++|||.+.......  ....||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.
T Consensus       153 -----------~~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~  221 (355)
T d2b1pa1         153 -----------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR  221 (355)
T ss_dssp             -----------CTTCCEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             -----------ccccceeeechhhhhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCC
Confidence                       555667778887765433332  3457899999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +.......+....+.++.+.+....................   ........    .............++++.+||++|
T Consensus       222 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~s~~~~dll~~m  294 (355)
T d2b1pa1         222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGL---TFPKLFPD----SLFPADSEHNKLKASQARDLLSKM  294 (355)
T ss_dssp             SHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCC---CHHHHSCG----GGSCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccc---cccccccc----ccccccccccccCCHHHHHHHHHH
Confidence            88888888888888888888888777776665543211111   01110000    000001112234577899999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      |+.||++||||+|+|+||||++
T Consensus       295 L~~dP~~R~ta~elL~Hpw~~~  316 (355)
T d2b1pa1         295 LVIDPAKRISVDDALQHPYINV  316 (355)
T ss_dssp             SCSSTTTSCCHHHHHTSTTTGG
T ss_pred             CcCChhHCcCHHHHhcCcccCC
Confidence            9999999999999999999986

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-51  Score=381.60  Aligned_cols=283  Identities=26%  Similarity=0.427  Sum_probs=212.4

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee---
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY---  115 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~---  115 (379)
                      .-.|+++++||+|+||+||+|+++.+|+.||||++...   ......+.+|+.+++.+     .|+|++.+++.+..   
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-----~h~nii~~~~~~~~~~~   83 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-----KHENVVNLIEICRTKAS   83 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHC-----CCTTBCCEEEEEEC---
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHh-----cCCCccceEeeeecccc
Confidence            35789999999999999999999999999999998532   33445677899999998     77899999888754   


Q ss_pred             -----cceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCc
Q 017021          116 -----RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       116 -----~~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                           +.++|+||||+++.+........ ..+++..++.++.||+.||.|||+.||+||||||+|||++           
T Consensus        84 ~~~~~~~~~~iv~e~~~~~~~~~~~~~~-~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~-----------  151 (318)
T d3blha1          84 PYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-----------  151 (318)
T ss_dssp             -------CEEEEEECCCEEHHHHHTCTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-----------
T ss_pred             cccccCceEEEEEeccCCCccchhhhcc-cccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeec-----------
Confidence                 45789999999655555544332 4689999999999999999999999999999999999994           


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCC-------CCcccccCCccchhhhhCC-CCCCccchHhHHHHHHHH
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVEL  262 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l  262 (379)
                                      .++.++|+|||++......       .....||+.|+|||++.+. .++.++|||||||++|+|
T Consensus       152 ----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el  215 (318)
T d3blha1         152 ----------------RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM  215 (318)
T ss_dssp             ----------------TTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             ----------------CCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeH
Confidence                            4555666666666432221       1234699999999998765 689999999999999999


Q ss_pred             HhCCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchh-hHHHHHHhhccc
Q 017021          263 CTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR-LQNLIMQHVDHS  341 (379)
Q Consensus       263 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  341 (379)
                      ++|+.||.+.+..+....+.+..+.++...+..........                ........+. ....  ......
T Consensus       216 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~--~~~~~~  277 (318)
T d3blha1         216 WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYE----------------KLELVKGQKRKVKDR--LKAYVR  277 (318)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-----------------------CCSSCCBCHHHH--HHHHHC
T ss_pred             hhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhh----------------hhcccccccccchhh--hccccC
Confidence            99999999989888888888888887765433322111000                0000000000 0000  011234


Q ss_pred             hhHHHHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          342 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       342 ~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      ++.+.|||.+||++||++||||+|+|+||||+.+
T Consensus       278 ~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~  311 (318)
T d3blha1         278 DPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  311 (318)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence            6788999999999999999999999999999864

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-51  Score=370.17  Aligned_cols=246  Identities=25%  Similarity=0.370  Sum_probs=196.4

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ...|++.++||+|+||+||+|+++ +++.||||+++........+.+|+.++.++     .|+||+++++++..++..++
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l-----~HpnIv~~~g~~~~~~~~~l   77 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKL-----SHPKLVQLYGVCLEQAPICL   77 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSSSCEE
T ss_pred             hHHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHHHHHHHHHHHhc-----CCCCcccccceeccCCceEE
Confidence            345788899999999999999976 467899999987666677889999999998     78999999999999999999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      ||||+ +++|.+++.... ..+++..+..++.||+.||.|||+.+|+||||||+||+++                     
T Consensus        78 v~E~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~---------------------  135 (263)
T d1sm2a_          78 VFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---------------------  135 (263)
T ss_dssp             EEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEEC---------------------
T ss_pred             EEEecCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeec---------------------
Confidence            99999 999999987654 3688999999999999999999999999999999999995                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchH
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  275 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~  275 (379)
                            .++.+||+|||+++......    ....||+.|+|||++.+..++.++|||||||++|||++ |.+||...+..
T Consensus       136 ------~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~  209 (263)
T d1sm2a_         136 ------ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS  209 (263)
T ss_dssp             ------GGGCEEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHH
T ss_pred             ------CCCCeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHH
Confidence                  44556677777665433222    23468999999999999999999999999999999999 56667665555


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.......                      .                          +...++++.+||.+||+.
T Consensus       210 ~~~~~i~~~~~~~----------------------~--------------------------p~~~~~~l~~li~~cl~~  241 (263)
T d1sm2a_         210 EVVEDISTGFRLY----------------------K--------------------------PRLASTHVYQIMNHCWKE  241 (263)
T ss_dssp             HHHHHHHHTCCCC----------------------C--------------------------CTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHHhcCCCC----------------------C--------------------------ccccCHHHHHHHHHHccC
Confidence            5554443322111                      0                          113567899999999999


Q ss_pred             CCCCCcCHHHHhcC
Q 017021          356 DPTDRLTAREALRH  369 (379)
Q Consensus       356 dP~~Rpta~e~l~h  369 (379)
                      ||++|||++|+++|
T Consensus       242 ~p~~Rps~~~il~~  255 (263)
T d1sm2a_         242 RPEDRPAFSRLLRQ  255 (263)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             CHhHCcCHHHHHHH
Confidence            99999999999976

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-51  Score=384.26  Aligned_cols=279  Identities=26%  Similarity=0.449  Sum_probs=221.8

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec---
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---  116 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~---  116 (379)
                      ..|++.++||+|+||+||+|+++.+|+.||||+++..   ......+.+|+.+++++     .|+|++++++++...   
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-----~h~~iv~~~~~~~~~~~~   92 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-----KHENVIGLLDVFTPARSL   92 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCCSEEECSCSST
T ss_pred             CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhc-----CCCCeeeEEEEEeecccc
Confidence            3599999999999999999999999999999999743   22345677899999998     789999999988643   


Q ss_pred             ---ceEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          117 ---NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       117 ---~~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                         ...++++++.+++|.+++..+   .+++..++.++.||+.||+|||++||+||||||+|||+               
T Consensus        93 ~~~~~~~i~~~~~gg~L~~~~~~~---~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi---------------  154 (348)
T d2gfsa1          93 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---------------  154 (348)
T ss_dssp             TTCCCCEEEEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---------------
T ss_pred             ccCceEEEEEeecCCchhhhcccc---cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccc---------------
Confidence               345555555599999998654   59999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCC-CCCccchHhHHHHHHHHHhCCCCCCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTH  272 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~il~~l~~g~~pf~~~  272 (379)
                                  +.++.++++|||.+...........||+.|+|||...+.. ++.++|||||||++|+|++|+.||.+.
T Consensus       155 ------------~~~~~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~  222 (348)
T d2gfsa1         155 ------------NEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT  222 (348)
T ss_dssp             ------------CTTCCEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ------------cccccccccccchhcccCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCC
Confidence                        5666788888888876666666678999999999877654 679999999999999999999999999


Q ss_pred             chHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          273 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      +.......+.+..+..+.+....................+..                  .........++++.|||.+|
T Consensus       223 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~s~~~~dli~~m  284 (348)
T d2gfsa1         223 DHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM------------------NFANVFIGANPLAVDLLEKM  284 (348)
T ss_dssp             SHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCC------------------CHHHHSTTCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCc------------------chhhhcCCCCHHHHHHHHHH
Confidence            998888888888888887766554333322222211111110                  01112335678899999999


Q ss_pred             cccCCCCCcCHHHHhcCCCCCC
Q 017021          353 LRYDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~hp~f~~  374 (379)
                      |+.||.+||||+|+|+||||++
T Consensus       285 L~~dP~~R~ta~elL~Hp~f~~  306 (348)
T d2gfsa1         285 LVLDSDKRITAAQALAHAYFAQ  306 (348)
T ss_dssp             SCSSGGGSCCHHHHHTSGGGTT
T ss_pred             CcCChhhCcCHHHHhcCHhhCC
Confidence            9999999999999999999985

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-51  Score=380.42  Aligned_cols=278  Identities=29%  Similarity=0.522  Sum_probs=212.5

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc----
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN----  117 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~----  117 (379)
                      .|+++++||+|+||+||+|+++.+|+.||||+++..  ......+.+|+.+++++     +|++++++++.+....    
T Consensus         9 rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l-----~hp~iv~~~~~~~~~~~~~~   83 (345)
T d1pmea_           9 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-----RHENIIGINDIIRAPTIEQM   83 (345)
T ss_dssp             TEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHC-----CCTTBCCCCEEECCSSTTTC
T ss_pred             CeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHc-----CCCCCCcEEEEEeecccccc
Confidence            589999999999999999999999999999999743  23345678899999998     7899999999887543    


Q ss_pred             -eEEEEEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCC
Q 017021          118 -HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  196 (379)
Q Consensus       118 -~~~lv~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~  196 (379)
                       ..|+++++++++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||+                  
T Consensus        84 ~~~~l~~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl------------------  142 (345)
T d1pmea_          84 KDVYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL------------------  142 (345)
T ss_dssp             CCEEEEEECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE------------------
T ss_pred             ceEEEEEeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEE------------------
Confidence             46777766699999999875   49999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCeEEeecCcccccCCC------CCcccccCCccchhhhh-CCCCCCccchHhHHHHHHHHHhCCCCC
Q 017021          197 KDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALF  269 (379)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlG~il~~l~~g~~pf  269 (379)
                               +.++.+||+|||++......      .....||+.|+|||++. +..++.++||||+||++|+|++|+.||
T Consensus       143 ---------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf  213 (345)
T d1pmea_         143 ---------NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF  213 (345)
T ss_dssp             ---------CTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ---------CCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCC
Confidence                     45566777777777543222      23356899999999984 456789999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHcCCCChhHHHhhhhh-hhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          270 QTHENLEHLAMMERVLGPLPQHMLKRVDRH-AEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      .+.+..+...........++.......... .......    .+...          ..     .........++++.+|
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----------~~-----~~~~~~~~~s~~~~~l  274 (345)
T d1pmea_         214 PGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS----LPHKN----------KV-----PWNRLFPNADSKALDL  274 (345)
T ss_dssp             CCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHT----SCCCC----------CC-----CHHHHCTTSCHHHHHH
T ss_pred             CCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhccccc----CCccC----------CC-----CHHHhCCCCCHHHHHH
Confidence            988887777777777666665443221111 1110000    00000          00     0112234567789999


Q ss_pred             HhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          349 LQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      |.+||+.||.+||||+|+|+||||++.
T Consensus       275 i~~~L~~dP~~R~ta~e~L~hpf~~~~  301 (345)
T d1pmea_         275 LDKMLTFNPHKRIEVEQALAHPYLEQY  301 (345)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHHccCChhHCcCHHHHhcCHhhccC
Confidence            999999999999999999999999853

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-52  Score=375.94  Aligned_cols=253  Identities=26%  Similarity=0.356  Sum_probs=204.6

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      +....|++.++||+|+||.||+|+++ +++.||||+++........+.+|+.++.++     .|+||+++++++.+ +..
T Consensus        10 i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~~~g~~~~-~~~   82 (272)
T d1qpca_          10 VPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQL-----QHQRLVRLYAVVTQ-EPI   82 (272)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECS-SSC
T ss_pred             cCHHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhC-----CCCCEeEEEeeecc-CCe
Confidence            34567899999999999999999975 578899999986666677889999999998     78999999998755 557


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      ++||||+ +|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||+                    
T Consensus        83 ~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll--------------------  142 (272)
T d1qpca_          83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--------------------  142 (272)
T ss_dssp             EEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE--------------------
T ss_pred             EEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheee--------------------
Confidence            9999999 9999998765433358999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhC-CCCCCCCc
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG-EALFQTHE  273 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g-~~pf~~~~  273 (379)
                             +.+..+||+|||+|+......    ....||+.|+|||++.+..++.++|||||||++|||+|| .+|+...+
T Consensus       143 -------~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~  215 (272)
T d1qpca_         143 -------SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT  215 (272)
T ss_dssp             -------CTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             -------ecccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCC
Confidence                   555667777888776543322    234688999999999988899999999999999999995 55555555


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.+...+.                      .                          ++..++++.+||.+||
T Consensus       216 ~~~~~~~i~~~~~~~----------------------~--------------------------p~~~~~~l~~li~~cl  247 (272)
T d1qpca_         216 NPEVIQNLERGYRMV----------------------R--------------------------PDNCPEELYQLMRLCW  247 (272)
T ss_dssp             HHHHHHHHHTTCCCC----------------------C--------------------------CTTCCHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCCCC----------------------C--------------------------cccChHHHHHHHHHHc
Confidence            544444333211111                      1                          1235678999999999


Q ss_pred             ccCCCCCcCHHHHhc--CCCCCC
Q 017021          354 RYDPTDRLTAREALR--HPFFTR  374 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~--hp~f~~  374 (379)
                      +.||++|||++|+++  |+||+.
T Consensus       248 ~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         248 KERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCHhHCcCHHHHHHHhhhhhhc
Confidence            999999999999998  788764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-51  Score=365.14  Aligned_cols=245  Identities=21%  Similarity=0.318  Sum_probs=206.0

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  122 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv  122 (379)
                      ..|++.++||+|+||+||+|+++ +++.||||+++........+.+|+.++.++     .|+||+++++++.+++.+++|
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l-----~HpnIv~~~g~~~~~~~~~iv   77 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-----SHEKLVQLYGVCTKQRPIFII   77 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCHHHHHHHHHHHHTC-----CCTTBCCEEEEECCSSSEEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCHHHHHHHHHHHHhc-----CCCceeeEEEEEeeCCceEEE
Confidence            35788899999999999999975 678999999987666778889999999988     789999999999999999999


Q ss_pred             EeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          123 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       123 ~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      |||+ +|+|.+++.... ..+++..+..++.|+++||+|||+.||+||||||+||++                       
T Consensus        78 ~Ey~~~g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill-----------------------  133 (258)
T d1k2pa_          78 TEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV-----------------------  133 (258)
T ss_dssp             EECCTTEEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEE-----------------------
T ss_pred             EEccCCCcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEE-----------------------
Confidence            9999 899999876643 358899999999999999999999999999999999999                       


Q ss_pred             cccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHH
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  276 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~  276 (379)
                          +.+..+||+|||++.......    ....||+.|+|||.+.+..++.++|||||||++|||+| |+.||.+.+..+
T Consensus       134 ----~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~  209 (258)
T d1k2pa_         134 ----NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE  209 (258)
T ss_dssp             ----CTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH
T ss_pred             ----cCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH
Confidence                455667777777775433222    22468899999999999999999999999999999998 899999887776


Q ss_pred             HHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccC
Q 017021          277 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  356 (379)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  356 (379)
                      ....+.+......                                                +...++++.+||.+||+.|
T Consensus       210 ~~~~i~~~~~~~~------------------------------------------------p~~~~~~l~~li~~cl~~d  241 (258)
T d1k2pa_         210 TAEHIAQGLRLYR------------------------------------------------PHLASEKVYTIMYSCWHEK  241 (258)
T ss_dssp             HHHHHHTTCCCCC------------------------------------------------CTTCCHHHHHHHHHTTCSS
T ss_pred             HHHHHHhCCCCCC------------------------------------------------cccccHHHHHHHHHHccCC
Confidence            6655543221111                                                1135678999999999999


Q ss_pred             CCCCcCHHHHhcC
Q 017021          357 PTDRLTAREALRH  369 (379)
Q Consensus       357 P~~Rpta~e~l~h  369 (379)
                      |++|||++++++|
T Consensus       242 P~~RPt~~eil~~  254 (258)
T d1k2pa_         242 ADERPTFKILLSN  254 (258)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999999986

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-51  Score=371.54  Aligned_cols=277  Identities=27%  Similarity=0.439  Sum_probs=217.8

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccc---hhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      .|+++++||+|+||+||+|+++.+|+.||||+++...   .....+.+|+.+++.+     .|+||+++++++.+....+
T Consensus         3 ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-----~h~niv~~~~~~~~~~~~~   77 (292)
T d1unla_           3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-----KHKNIVRLHDVLHSDKKLT   77 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSSEEE
T ss_pred             CCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhc-----CcCCEEeecccccccccee
Confidence            5899999999999999999999999999999996432   3346677888888877     7899999999999999999


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      ++++++ ++++..++....  .+++..+..++.|++.||+|||++||+||||||+|||+                     
T Consensus        78 iv~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli---------------------  134 (292)
T d1unla_          78 LVFEFCDQDLKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---------------------  134 (292)
T ss_dssp             EEEECCSEEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---------------------
T ss_pred             EEeeecccccccccccccc--ccchhHHHHHHHHHHHHHHHhhcCCEeeecccCccccc---------------------
Confidence            999999 777777666544  68999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCeEEeecCcccccCCCC---CcccccCCccchhhhhCCC-CCCccchHhHHHHHHHHHhCCCCC-CCCch
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALF-QTHEN  274 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~il~~l~~g~~pf-~~~~~  274 (379)
                            +.+..++|+|||.+.......   ....+++.|.|||.+.+.. ++.++|||||||++|+|++|+.|| .+.+.
T Consensus       135 ------~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~  208 (292)
T d1unla_         135 ------NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV  208 (292)
T ss_dssp             ------CTTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH
T ss_pred             ------ccCCceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCH
Confidence                  556678888888887544433   2345778899999987765 689999999999999999998885 45566


Q ss_pred             HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          275 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      .+....+....+.+++..++..........    ......                ...........++.+.+||++||+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----------------~~~~~~~~~~~s~~~~dll~~mL~  268 (292)
T d1unla_         209 DDQLKRIFRLLGTPTEEQWPSMTKLPDYKP----YPMYPA----------------TTSLVNVVPKLNATGRDLLQNLLK  268 (292)
T ss_dssp             HHHHHHHHHHHCCCCTTTCTTGGGSTTCCC----CCCCCT----------------TCCCTTTSTTCCHHHHHHHHHHSC
T ss_pred             HHHHHHHHhhcCCCChhhhhhhhhcccccc----cccccc----------------cchhhhccccCCHHHHHHHHHHcc
Confidence            667777777777776654443322211100    000000                001111223467789999999999


Q ss_pred             cCCCCCcCHHHHhcCCCCCC
Q 017021          355 YDPTDRLTAREALRHPFFTR  374 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f~~  374 (379)
                      .||.+||||+|+|+||||++
T Consensus       269 ~dP~~R~sa~e~L~Hp~f~~  288 (292)
T d1unla_         269 CNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             SSGGGSCCHHHHTTSGGGSS
T ss_pred             CChhHCcCHHHHhcChhhcC
Confidence            99999999999999999975

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=7.4e-51  Score=377.38  Aligned_cols=284  Identities=24%  Similarity=0.463  Sum_probs=210.3

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee--cceEE
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--RNHIC  120 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~--~~~~~  120 (379)
                      -.|+++++||+|+||+||+|+++.+|+.||||+++...  ...+.+|+.++..+    .+|+||+++++++..  ...++
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~Ei~il~~l----~~hpnIv~~~~~~~~~~~~~~~  108 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENL----RGGPNIITLADIVKDPVSRTPA  108 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC--HHHHHHHHHHHHHH----TTSTTBCCEEEEEECTTTCSEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH--HHHHHHHHHHHHhc----cCCCCCcEEEEEEEecCCCcee
Confidence            35899999999999999999999999999999997433  45677899999888    247899999999874  45799


Q ss_pred             EEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCC
Q 017021          121 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  199 (379)
Q Consensus       121 lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~  199 (379)
                      +||||+ +++|..+.     +.+++..++.++.||+.||+|||++||+||||||+|||++.                   
T Consensus       109 ~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~-------------------  164 (328)
T d3bqca1         109 LVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH-------------------  164 (328)
T ss_dssp             EEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET-------------------
T ss_pred             EEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcC-------------------
Confidence            999999 78876542     35999999999999999999999999999999999999953                   


Q ss_pred             cccccCCCCCCeEEeecCcccccCCC--CCcccccCCccchhhhhCC-CCCCccchHhHHHHHHHHHhCCCCCCCCc-hH
Q 017021          200 SYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHE-NL  275 (379)
Q Consensus       200 ~~~~~~~~~~~~~l~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~~l~~g~~pf~~~~-~~  275 (379)
                             .+..++|+|||.|......  .....||+.|+|||.+.+. .++.++||||+||++|+|++|+.||.... ..
T Consensus       165 -------~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~  237 (328)
T d3bqca1         165 -------EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY  237 (328)
T ss_dssp             -------TTTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH
T ss_pred             -------CCCeeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhH
Confidence                   2345888999988754433  3455789999999998765 47899999999999999999999997654 44


Q ss_pred             HHHHHHHHHcCCCChhHHHh-hhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccc
Q 017021          276 EHLAMMERVLGPLPQHMLKR-VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  354 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  354 (379)
                      +....+.+..+.+....+.. ............ ...    ..........        ........++++.|||++||+
T Consensus       238 ~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~--------~~~~~~~~s~~~~dli~~mL~  304 (328)
T d3bqca1         238 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGR----HSRKRWERFV--------HSENQHLVSPEALDFLDKLLR  304 (328)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGT-CCC----CCCCCGGGGC--------CTTTGGGCCHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHCCchhhhhhhhcccccCcccchh-ccc----ccccchhhcc--------cccccccCCHHHHHHHHHHcc
Confidence            44555555555332221111 000000000000 000    0000000000        011123467889999999999


Q ss_pred             cCCCCCcCHHHHhcCCCCCCCC
Q 017021          355 YDPTDRLTAREALRHPFFTRDH  376 (379)
Q Consensus       355 ~dP~~Rpta~e~l~hp~f~~~~  376 (379)
                      +||.+||||+|+|+||||++..
T Consensus       305 ~dP~~R~ta~e~L~Hp~F~~v~  326 (328)
T d3bqca1         305 YDHQSRLTAREAMEHPYFYTVV  326 (328)
T ss_dssp             SSGGGSCCHHHHHTSGGGTTSC
T ss_pred             CChhHCcCHHHHhcCcccCCCC
Confidence            9999999999999999999753

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9e-51  Score=371.20  Aligned_cols=249  Identities=22%  Similarity=0.336  Sum_probs=194.7

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCc---eEEEEEeec--cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKE---MVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~---~vAiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      +....|++.+.||+|+||+||+|+++.+++   .||+|.+..  .......+.+|+.++.++     .|+||+++++++.
T Consensus        23 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~l~g~~~   97 (299)
T d1jpaa_          23 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-----DHPNVIHLEGVVT   97 (299)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEC
T ss_pred             hChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC-----CCCCCccEEEEEe
Confidence            344568888999999999999999987765   589998863  233456778899998887     7899999999999


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      .++.+++||||+ +|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||+               
T Consensus        98 ~~~~~~iv~Ey~~~g~L~~~~~~~~-~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl---------------  161 (299)
T d1jpaa_          98 KSTPVMIITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV---------------  161 (299)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---------------
T ss_pred             eCCEEEEEEEecCCCcceeeecccc-CCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEE---------------
Confidence            999999999999 899999887654 368999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC--------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-  264 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-  264 (379)
                                  +.++.+||+|||+++......        ....||+.|+|||.+.+..++.++|||||||++|||+| 
T Consensus       162 ------------~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~  229 (299)
T d1jpaa_         162 ------------NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSY  229 (299)
T ss_dssp             ------------CTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             ------------CCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhC
Confidence                        455567777777765433221        12357889999999999999999999999999999998 


Q ss_pred             CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhH
Q 017021          265 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  344 (379)
Q Consensus       265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (379)
                      |+.||...+..+....+.+....++                                                +..++..
T Consensus       230 g~~Pf~~~~~~~~~~~i~~~~~~~~------------------------------------------------~~~~~~~  261 (299)
T d1jpaa_         230 GERPYWDMTNQDVINAIEQDYRLPP------------------------------------------------PMDCPSA  261 (299)
T ss_dssp             SCCTTTTCCHHHHHHHHHTTCCCCC------------------------------------------------CTTCCHH
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCC------------------------------------------------CccchHH
Confidence            8999988777665554433221111                                                1135678


Q ss_pred             HHHHHhhccccCCCCCcCHHHHhcC
Q 017021          345 LTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       345 ~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      +.+||.+||+.||++|||++|++++
T Consensus       262 l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         262 LHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            9999999999999999999998764

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-50  Score=375.24  Aligned_cols=252  Identities=21%  Similarity=0.281  Sum_probs=200.6

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCc-----eEEEEEeec--cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKE-----MVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~-----~vAiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      ++...|++.++||+|+||+||+|+++.+++     .||+|++..  .......+.+|+.++.++    .+|+||++++++
T Consensus        34 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l----~~HpnIv~l~~~  109 (325)
T d1rjba_          34 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL----GSHENIVNLLGA  109 (325)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHH----CCCTTBCCEEEE
T ss_pred             CCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHh----cCCCcEeEEEEE
Confidence            445678899999999999999999876553     699999853  233445677899988887    367999999999


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccC
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNNY---------------------RSFPIDLVREIARQLLECIAFMHDLCMIHTD  170 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~~---------------------~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~d  170 (379)
                      +.+.+.+|+||||| +|+|.+++.....                     ..+++..++.++.||+.||+|||++||+|||
T Consensus       110 ~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRD  189 (325)
T d1rjba_         110 CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD  189 (325)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred             EeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            99999999999999 9999999976431                     2478999999999999999999999999999


Q ss_pred             CCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCC
Q 017021          171 LKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLG  245 (379)
Q Consensus       171 lkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~  245 (379)
                      |||+||+++                           .++.+||+|||+|+......     ....||+.|+|||++.+..
T Consensus       190 lKp~Nill~---------------------------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~  242 (325)
T d1rjba_         190 LAARNVLVT---------------------------HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI  242 (325)
T ss_dssp             CSGGGEEEE---------------------------TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCC
T ss_pred             Cchhccccc---------------------------cCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCC
Confidence            999999994                           45567777777776433332     2346799999999999999


Q ss_pred             CCCccchHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhh
Q 017021          246 WTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSV  324 (379)
Q Consensus       246 ~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (379)
                      ++.++|||||||++|||++ |..||.+.+..+....+.+....                     ++.             
T Consensus       243 ~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~---------------------~~~-------------  288 (325)
T d1rjba_         243 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFK---------------------MDQ-------------  288 (325)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCC---------------------CCC-------------
T ss_pred             CCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC---------------------CCC-------------
Confidence            9999999999999999997 89999876554443332221111                     111             


Q ss_pred             ccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          325 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                                   +...++++.+||.+||+.||++|||++|+++|
T Consensus       289 -------------p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         289 -------------PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             -------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------------CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                         12356789999999999999999999999976

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.8e-51  Score=369.11  Aligned_cols=249  Identities=23%  Similarity=0.317  Sum_probs=195.5

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc--
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN--  117 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~--  117 (379)
                      .|++.+.||+|+||+||+|+++.+|+.||+|+++..    ......+.+|+.++..+     +|+||+++++++...+  
T Consensus         8 rY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~-----~hpniv~~~~~~~~~~~~   82 (277)
T d1o6ya_           8 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-----NHPAIVAVYDTGEAETPA   82 (277)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEEEECSS
T ss_pred             eeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhc-----CCCCCCcccceeeeccCC
Confidence            489999999999999999999999999999999643    22344567888888877     8899999999987643  


Q ss_pred             --eEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          118 --HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       118 --~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                        .+|+||||+ |++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+||++..              
T Consensus        83 ~~~~~lvmE~~~g~~L~~~~~~~~--~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~--------------  146 (277)
T d1o6ya_          83 GPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA--------------  146 (277)
T ss_dssp             SEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--------------
T ss_pred             CceEEEEEECCCCCEehhhhcccC--CCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCc--------------
Confidence              489999999 899999987765  6999999999999999999999999999999999999954              


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCC------CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                                   +...+++|||.+......      .....||+.|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       147 -------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~P  213 (277)
T d1o6ya_         147 -------------TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP  213 (277)
T ss_dssp             -------------TSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             -------------cccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCC
Confidence                         455666666655432221      2345799999999999999999999999999999999999999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |.+.+..+....+.+....++.                                             ..++..++++.++
T Consensus       214 f~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~s~~l~~l  248 (277)
T d1o6ya_         214 FTGDSPVSVAYQHVREDPIPPS---------------------------------------------ARHEGLSADLDAV  248 (277)
T ss_dssp             CCCSSHHHHHHHHHHCCCCCGG---------------------------------------------GTSSSCCHHHHHH
T ss_pred             CCCcCHHHHHHHHHhcCCCCCc---------------------------------------------hhccCCCHHHHHH
Confidence            9987776665544332222111                                             1123467899999


Q ss_pred             HhhccccCCCCCc-CHHHHhcCCCC
Q 017021          349 LQGLLRYDPTDRL-TAREALRHPFF  372 (379)
Q Consensus       349 i~~~L~~dP~~Rp-ta~e~l~hp~f  372 (379)
                      |.+||+.||++|| ||+++ .|+|.
T Consensus       249 i~~~L~~dp~~R~~sa~~l-~~~l~  272 (277)
T d1o6ya_         249 VLKALAKNPENRYQTAAEM-RADLV  272 (277)
T ss_dssp             HHHHTCSSGGGSCSSHHHH-HHHHH
T ss_pred             HHHHccCCHhHCHhHHHHH-HHHHH
Confidence            9999999999999 55554 56654

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-50  Score=365.66  Aligned_cols=250  Identities=23%  Similarity=0.314  Sum_probs=193.2

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeec
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  116 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~  116 (379)
                      +..-.|++.++||+|+||+||+|+.+   ..||||+++..   ......+.+|+.++.++     .|+||+++++++.. 
T Consensus         5 i~~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~~~~~~~~-   75 (276)
T d1uwha_           5 IPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-----RHVNILLFMGYSTA-   75 (276)
T ss_dssp             CCTTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTC-----CCTTBCCEEEEECS-
T ss_pred             cccccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-----CCCCEeeeeEEEec-
Confidence            44556889999999999999999754   35999998632   33446677899988887     78999999987654 


Q ss_pred             ceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCC
Q 017021          117 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  195 (379)
Q Consensus       117 ~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~  195 (379)
                      +.+++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++                
T Consensus        76 ~~~~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~----------------  138 (276)
T d1uwha_          76 PQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH----------------  138 (276)
T ss_dssp             SSCEEEEECCCEEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE----------------
T ss_pred             cEEEEEEecCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEc----------------
Confidence            5689999999 899999997654 3589999999999999999999999999999999999994                


Q ss_pred             CCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhC---CCCCCccchHhHHHHHHHHHhCCC
Q 017021          196 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                                 .++.+||+|||+|.......     ....||+.|+|||++.+   ..++.++|||||||++|||+||+.
T Consensus       139 -----------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~  207 (276)
T d1uwha_         139 -----------EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL  207 (276)
T ss_dssp             -----------TTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             -----------CCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCC
Confidence                       44566777777665433221     23578999999999864   348899999999999999999999


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      ||.+.+...............|.                                           .......+++++.+
T Consensus       208 Pf~~~~~~~~~~~~~~~~~~~p~-------------------------------------------~~~~~~~~~~~l~~  244 (276)
T d1uwha_         208 PYSNINNRDQIIFMVGRGYLSPD-------------------------------------------LSKVRSNCPKAMKR  244 (276)
T ss_dssp             TTTTCCCHHHHHHHHHHTSCCCC-------------------------------------------GGGSCTTCCHHHHH
T ss_pred             CCCCCChHHHHHHHHhcCCCCCc-------------------------------------------chhccccchHHHHH
Confidence            99876654433322221111110                                           00112346788999


Q ss_pred             HHhhccccCCCCCcCHHHHhcC
Q 017021          348 LLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      ||.+||+.||++|||++|+++|
T Consensus       245 li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         245 LMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCCHhHCcCHHHHHHH
Confidence            9999999999999999999976

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-50  Score=366.36  Aligned_cols=241  Identities=24%  Similarity=0.373  Sum_probs=191.9

Q ss_pred             hccccccceeEEEEEec--CCCceEEEEEeecc---chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEE
Q 017021           49 SKMGEGTFGQVLECWDR--ERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  123 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~  123 (379)
                      ++||+|+||+||+|.++  .+++.||+|+++..   ......+.+|+.++.++     .|+||++++++++.+ ..++||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~g~~~~~-~~~lvm   86 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-----DNPYIVRMIGICEAE-SWMLVM   86 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEESS-SEEEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhC-----CCCCCceEEEEeccC-CEEEEE
Confidence            46999999999999764  45688999999632   23345678899999888     789999999998654 578999


Q ss_pred             eCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCccc
Q 017021          124 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  202 (379)
Q Consensus       124 e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~  202 (379)
                      ||+ +|+|.+++....  .+++..+..++.||+.||+|||+.||+||||||+||+++.+                     
T Consensus        87 E~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~---------------------  143 (277)
T d1xbba_          87 EMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ---------------------  143 (277)
T ss_dssp             ECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET---------------------
T ss_pred             EcCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhccccc---------------------
Confidence            999 899999998765  69999999999999999999999999999999999999554                     


Q ss_pred             ccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchH
Q 017021          203 KRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  275 (379)
Q Consensus       203 ~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~  275 (379)
                            +.++|+|||+++......      ....||+.|+|||.+.+..++.++|||||||++|||++ |+.||.+.+..
T Consensus       144 ------~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~  217 (277)
T d1xbba_         144 ------HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS  217 (277)
T ss_dssp             ------TEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             ------CcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH
Confidence                  455666666665433222      22468899999999999899999999999999999998 89999887766


Q ss_pred             HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcccc
Q 017021          276 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  355 (379)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  355 (379)
                      +....+.+...                      ++.|                          ..+++++.+||.+||+.
T Consensus       218 ~~~~~i~~~~~----------------------~~~p--------------------------~~~~~~~~~li~~cl~~  249 (277)
T d1xbba_         218 EVTAMLEKGER----------------------MGCP--------------------------AGCPREMYDLMNLCWTY  249 (277)
T ss_dssp             HHHHHHHTTCC----------------------CCCC--------------------------TTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHHcCCC----------------------CCCC--------------------------cccCHHHHHHHHHHcCC
Confidence            55544433111                      1111                          23667899999999999


Q ss_pred             CCCCCcCHHHH---hcCCCC
Q 017021          356 DPTDRLTAREA---LRHPFF  372 (379)
Q Consensus       356 dP~~Rpta~e~---l~hp~f  372 (379)
                      ||++|||++++   |+|+|+
T Consensus       250 dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         250 DVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             STTTSCCHHHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHhhCHHh
Confidence            99999999998   456654

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-50  Score=366.08  Aligned_cols=251  Identities=24%  Similarity=0.331  Sum_probs=198.1

Q ss_pred             echhhhhhhh-ccccccceeEEEEEecCC--CceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           40 FSAFADKIHS-KMGEGTFGQVLECWDRER--KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        40 ~~~~~y~i~~-~Lg~G~~g~V~~~~~~~~--~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      +....+.+.+ +||+|+||.||+|.++.+  +..||||+++..  ......+.+|+.++.++     .|+||++++++++
T Consensus         5 l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~l~g~~~   79 (285)
T d1u59a_           5 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-----DNPYIVRLIGVCQ   79 (285)
T ss_dssp             CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEE
T ss_pred             ecccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhC-----CCCCEeeEeeeec
Confidence            3445666777 499999999999987644  557999999643  33456778899999998     7899999999987


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      ++ .+|+||||+ +|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++           
T Consensus        80 ~~-~~~lvmE~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~-----------  146 (285)
T d1u59a_          80 AE-ALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH-----------  146 (285)
T ss_dssp             SS-SEEEEEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETT-----------
T ss_pred             cC-eEEEEEEeCCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCC-----------
Confidence            54 589999999 899999986543 3699999999999999999999999999999999999995544           


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GE  266 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~  266 (379)
                                      .+||+|||+++......      ....||+.|+|||++.+..++.++|||||||++|||+| |.
T Consensus       147 ----------------~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~  210 (285)
T d1u59a_         147 ----------------YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ  210 (285)
T ss_dssp             ----------------EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             ----------------ceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCC
Confidence                            45666666665433221      23458899999999998899999999999999999998 99


Q ss_pred             CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          267 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      .||...+..+....+.+...                      +..                          ++.+++++.
T Consensus       211 ~Pf~~~~~~~~~~~i~~~~~----------------------~~~--------------------------p~~~~~~l~  242 (285)
T d1u59a_         211 KPYKKMKGPEVMAFIEQGKR----------------------MEC--------------------------PPECPPELY  242 (285)
T ss_dssp             CTTTTCCTHHHHHHHHTTCC----------------------CCC--------------------------CTTCCHHHH
T ss_pred             CCCCCCCHHHHHHHHHcCCC----------------------CCC--------------------------CCcCCHHHH
Confidence            99988776665544433211                      111                          123667899


Q ss_pred             HHHhhccccCCCCCcCHHHH---hcCCCC
Q 017021          347 HLLQGLLRYDPTDRLTAREA---LRHPFF  372 (379)
Q Consensus       347 ~li~~~L~~dP~~Rpta~e~---l~hp~f  372 (379)
                      +||.+||+.||++|||+.++   |+|+|+
T Consensus       243 ~li~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         243 ALMSDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            99999999999999999888   567765

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-50  Score=363.85  Aligned_cols=254  Identities=26%  Similarity=0.326  Sum_probs=201.6

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceE
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  119 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  119 (379)
                      +....|++.+.||+|+||.||+|+++.+ +.||||+++........+.+|+.+++++     +|+||+++++++.+ +..
T Consensus        14 i~~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~~~~~~~E~~~l~~l-----~h~nIv~~~g~~~~-~~~   86 (285)
T d1fmka3          14 IPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEKLVQLYAVVSE-EPI   86 (285)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECS-SSC
T ss_pred             cCHHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCCHHHHHHHHHHHHhc-----ccCCEeEEEEEEec-CCe
Confidence            3456799999999999999999998765 5699999986666667888999999998     88999999999865 457


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      ++||||+ +|+|.+++.......+++..++.++.||+.||+|||+.||+||||||+|||++.                  
T Consensus        87 ~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~------------------  148 (285)
T d1fmka3          87 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE------------------  148 (285)
T ss_dssp             EEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG------------------
T ss_pred             EEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECC------------------
Confidence            8999999 899999986644346999999999999999999999999999999999999954                  


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCC-CCCCCCc
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE-ALFQTHE  273 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~-~pf~~~~  273 (379)
                               ++.+||+|||+++......    ....||+.|+|||++....++.++|||||||++|+|++|. +|+....
T Consensus       149 ---------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~  219 (285)
T d1fmka3         149 ---------NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV  219 (285)
T ss_dssp             ---------GGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             ---------CCcEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCC
Confidence                     4556777777665432221    2346899999999999999999999999999999999955 4455555


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.+....                      +.                          ....++++.+||.+||
T Consensus       220 ~~~~~~~i~~~~~~----------------------~~--------------------------~~~~~~~l~~li~~cl  251 (285)
T d1fmka3         220 NREVLDQVERGYRM----------------------PC--------------------------PPECPESLHDLMCQCW  251 (285)
T ss_dssp             HHHHHHHHHTTCCC----------------------CC--------------------------CTTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCCC----------------------CC--------------------------CcccCHHHHHHHHHHc
Confidence            55554444332111                      11                          1235678999999999


Q ss_pred             ccCCCCCcCHHHHhc--CCCCCCC
Q 017021          354 RYDPTDRLTAREALR--HPFFTRD  375 (379)
Q Consensus       354 ~~dP~~Rpta~e~l~--hp~f~~~  375 (379)
                      +.||++|||+++|++  |+||+..
T Consensus       252 ~~dP~~Rps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         252 RKEPEERPTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             CSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             ccCHhHCcCHHHHHHHHhhhhcCC
Confidence            999999999999998  8999754

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-50  Score=370.40  Aligned_cols=255  Identities=24%  Similarity=0.395  Sum_probs=206.4

Q ss_pred             hhhhhhhccccccceeEEEEEe---cCCCceEEEEEeecc-----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           43 FADKIHSKMGEGTFGQVLECWD---RERKEMVAIKIVRGI-----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~---~~~~~~vAiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      -.|++.++||+|+||+||+|++   +.+|+.||+|+++..     ......+.+|+.++.++.    +++||++++++++
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~----h~pnIv~~~~~~~   99 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR----QSPFLVTLHYAFQ   99 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHH----TCTTBCCEEEEEE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhcc----CCCeEEEeeeeec
Confidence            4489999999999999999987   457899999998632     233456778999999994    3478999999999


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                      +....+++|||+ +++|.+++....  .+++..+..++.||+.||+|||+.||+||||||+||++               
T Consensus       100 ~~~~~~~v~e~~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill---------------  162 (322)
T d1vzoa_         100 TETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---------------  162 (322)
T ss_dssp             ETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---------------
T ss_pred             cCCceeeeeecccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceee---------------
Confidence            999999999999 999999998765  57899999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCC--CCCCccchHhHHHHHHHHHhCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEA  267 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlG~il~~l~~g~~  267 (379)
                                  +.++.++|+|||.+.......    ....||+.|+|||.+.+.  .++.++|||||||++|+|++|+.
T Consensus       163 ------------~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~  230 (322)
T d1vzoa_         163 ------------DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS  230 (322)
T ss_dssp             ------------CTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSC
T ss_pred             ------------cCCCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCC
Confidence                        556678888888876443322    345789999999999764  36789999999999999999999


Q ss_pred             CCCCCchHHHHHHHHHHc-CCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHH
Q 017021          268 LFQTHENLEHLAMMERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  346 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (379)
                      ||.+.+..+....+.+.. ...                    ...                          ....++++.
T Consensus       231 PF~~~~~~~~~~~i~~~~~~~~--------------------~~~--------------------------~~~~s~~~~  264 (322)
T d1vzoa_         231 PFTVDGEKNSQAEISRRILKSE--------------------PPY--------------------------PQEMSALAK  264 (322)
T ss_dssp             TTSCTTSCCCHHHHHHHHHHCC--------------------CCC--------------------------CTTSCHHHH
T ss_pred             CCCCCCHHHHHHHHHHhcccCC--------------------CCC--------------------------cccCCHHHH
Confidence            998765433333222211 000                    001                          124678999


Q ss_pred             HHHhhccccCCCCCc-----CHHHHhcCCCCCCCC
Q 017021          347 HLLQGLLRYDPTDRL-----TAREALRHPFFTRDH  376 (379)
Q Consensus       347 ~li~~~L~~dP~~Rp-----ta~e~l~hp~f~~~~  376 (379)
                      +||.+||++||++||     ||+|+++||||++.+
T Consensus       265 ~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~  299 (322)
T d1vzoa_         265 DLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN  299 (322)
T ss_dssp             HHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             HHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCC
Confidence            999999999999999     589999999998855

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-49  Score=356.26  Aligned_cols=248  Identities=24%  Similarity=0.295  Sum_probs=192.8

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCC---ceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERK---EMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  114 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~---~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~  114 (379)
                      +....|++.+.||+|+||.||+|++..++   ..||+|.++..  ......+.+|+.++.++     +||||+++++++.
T Consensus         4 i~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~l~~~~~   78 (273)
T d1mp8a_           4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-----DHPHIVKLIGVIT   78 (273)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEC
T ss_pred             cCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEe
Confidence            45568999999999999999999986553   56899988632  33346677899988887     7899999999986


Q ss_pred             ecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCC
Q 017021          115 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  193 (379)
Q Consensus       115 ~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~  193 (379)
                       .+.+|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||+.|++||||||+||+++.+            
T Consensus        79 -~~~~~iv~E~~~~g~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~------------  144 (273)
T d1mp8a_          79 -ENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN------------  144 (273)
T ss_dssp             -SSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET------------
T ss_pred             -cCeEEEEEEeccCCcHHhhhhccC-CCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCC------------
Confidence             46789999999 899999877654 368999999999999999999999999999999999999544            


Q ss_pred             CCCCCCcccccCCCCCCeEEeecCcccccCCCC----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCC
Q 017021          194 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL  268 (379)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~p  268 (379)
                                     +.+||+|||+|+......    ....||+.|+|||.+.+..++.++|||||||++|+|++ |.+|
T Consensus       145 ---------------~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P  209 (273)
T d1mp8a_         145 ---------------DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP  209 (273)
T ss_dssp             ---------------TEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ---------------CcEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCC
Confidence                           456677777665433221    23467899999999999999999999999999999998 8999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |...+..+....+.+...                      .+.                          ++.+++++.+|
T Consensus       210 ~~~~~~~~~~~~i~~~~~----------------------~~~--------------------------~~~~~~~~~~l  241 (273)
T d1mp8a_         210 FQGVKNNDVIGRIENGER----------------------LPM--------------------------PPNCPPTLYSL  241 (273)
T ss_dssp             TTTCCGGGHHHHHHTTCC----------------------CCC--------------------------CTTCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCC----------------------CCC--------------------------CCCCCHHHHHH
Confidence            988776655544332111                      111                          12467789999


Q ss_pred             HhhccccCCCCCcCHHHHhcC
Q 017021          349 LQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~h  369 (379)
                      |.+||+.||++|||++|+++|
T Consensus       242 i~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         242 MTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCHhHCcCHHHHHHH
Confidence            999999999999999999875

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-48  Score=353.25  Aligned_cols=246  Identities=20%  Similarity=0.274  Sum_probs=190.6

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCC----ceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERK----EMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~----~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      ...|++.+.||+|+||.||+|.++.++    ..||||+++..  ......+.+|+.++.++     .|+||+++++++.+
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-----~H~nIv~~~g~~~~   80 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-----SHHNIIRLEGVISK   80 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEECS
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhc-----CCCCEeeeeEEEec
Confidence            345778899999999999999987665    47999998643  33345677899998888     78999999999999


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      .+..++||||+ ++++.+++.... ..+++..+..++.||+.||.|||+.+|+||||||+|||+                
T Consensus        81 ~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl----------------  143 (283)
T d1mqba_          81 YKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV----------------  143 (283)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----------------
T ss_pred             CCceEEEEEecccCcchhhhhccc-ccccHHHHHHHHHHHHHhhhhccccccccCccccceEEE----------------
Confidence            99999999999 888888877654 369999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCC-
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA-  267 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~-  267 (379)
                                 +.++.+||+|||+++......      ....||+.|+|||++.+..++.++|||||||++|||+++.. 
T Consensus       144 -----------~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~  212 (283)
T d1mqba_         144 -----------NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGER  212 (283)
T ss_dssp             -----------CTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             -----------CCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCC
Confidence                       555667777777776433221      12357899999999999999999999999999999999554 


Q ss_pred             CCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHH
Q 017021          268 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  347 (379)
Q Consensus       268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (379)
                      |+...+..+....+.....                      .+.                          +...+..+.+
T Consensus       213 ~~~~~~~~~~~~~i~~~~~----------------------~~~--------------------------~~~~~~~l~~  244 (283)
T d1mqba_         213 PYWELSNHEVMKAINDGFR----------------------LPT--------------------------PMDCPSAIYQ  244 (283)
T ss_dssp             TTTTCCHHHHHHHHHTTCC----------------------CCC--------------------------CTTCBHHHHH
T ss_pred             ccccCCHHHHHHHHhccCC----------------------CCC--------------------------chhhHHHHHH
Confidence            4544444444333322111                      111                          1235678999


Q ss_pred             HHhhccccCCCCCcCHHHHhc
Q 017021          348 LLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       348 li~~~L~~dP~~Rpta~e~l~  368 (379)
                      ||.+||+.||++|||++|+++
T Consensus       245 li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         245 LMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHCcCCHhHCcCHHHHHH
Confidence            999999999999999999975

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-49  Score=354.54  Aligned_cols=246  Identities=22%  Similarity=0.309  Sum_probs=193.1

Q ss_pred             chhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceee-ecceE
Q 017021           41 SAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD-YRNHI  119 (379)
Q Consensus        41 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~-~~~~~  119 (379)
                      +-..|++.++||+|+||.||+|.+  +|..||+|+++. +...+.+.+|+.++.++     .|+||+++++++. ..+.+
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~-~~~~~~~~~E~~~l~~l-----~HpnIv~~~g~~~~~~~~~   76 (262)
T d1byga_           5 NMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKN-DATAQAFLAEASVMTQL-----RHSNLVQLLGVIVEEKGGL   76 (262)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCC-CC--HHHHHTHHHHTTC-----CCTTBCCEEEEECCC--CC
T ss_pred             CHHHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECc-HHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEecCCcE
Confidence            344678889999999999999987  478899999974 34456788899988887     7899999999875 45678


Q ss_pred             EEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCC
Q 017021          120 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  198 (379)
Q Consensus       120 ~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~  198 (379)
                      |+||||+ +|+|.+++.......+++..++.++.||+.||.|||+.+|+||||||+||++                    
T Consensus        77 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~--------------------  136 (262)
T d1byga_          77 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV--------------------  136 (262)
T ss_dssp             EEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE--------------------
T ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhhee--------------------
Confidence            9999999 9999999976543358999999999999999999999999999999999999                    


Q ss_pred             CcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCCCCCCchHHH
Q 017021          199 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  277 (379)
Q Consensus       199 ~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~pf~~~~~~~~  277 (379)
                             +.++.++|+|||.++..........+|..|+|||++.+..++.++|||||||++|||++ |++||...+..+.
T Consensus       137 -------~~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~  209 (262)
T d1byga_         137 -------SEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV  209 (262)
T ss_dssp             -------CTTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH
T ss_pred             -------cCCCCEeecccccceecCCCCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHH
Confidence                   56677888899988876666666678999999999998899999999999999999998 7888877655444


Q ss_pred             HHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhccccCC
Q 017021          278 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  357 (379)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  357 (379)
                      ...+.+.                      ...+.                          +...++++.+||.+||+.||
T Consensus       210 ~~~i~~~----------------------~~~~~--------------------------~~~~~~~~~~li~~cl~~dP  241 (262)
T d1byga_         210 VPRVEKG----------------------YKMDA--------------------------PDGCPPAVYEVMKNCWHLDA  241 (262)
T ss_dssp             HHHHTTT----------------------CCCCC--------------------------CTTCCHHHHHHHHHHTCSSG
T ss_pred             HHHHHcC----------------------CCCCC--------------------------CccCCHHHHHHHHHHcccCH
Confidence            4333221                      11111                          12356789999999999999


Q ss_pred             CCCcCHHHHhcC
Q 017021          358 TDRLTAREALRH  369 (379)
Q Consensus       358 ~~Rpta~e~l~h  369 (379)
                      .+|||+.|++++
T Consensus       242 ~~Rps~~~l~~~  253 (262)
T d1byga_         242 AMRPSFLQLREQ  253 (262)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hHCcCHHHHHHH
Confidence            999999999864

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-48  Score=355.66  Aligned_cols=251  Identities=21%  Similarity=0.281  Sum_probs=188.2

Q ss_pred             echhhhhhhhccccccceeEEEEEecC-----CCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRE-----RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      ++...|++.++||+|+||.||+|++..     +++.||+|+++..  ......+..|...+.++    .+|++++.++++
T Consensus        10 i~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~----~~h~~iv~~~~~   85 (299)
T d1ywna1          10 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI----GHHLNVVNLLGA   85 (299)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHH----CCCTTBCCEEEE
T ss_pred             ccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhh----cCCCeEEEeeee
Confidence            445678999999999999999998754     4578999998632  23344556677777776    356788888887


Q ss_pred             eee-cceEEEEEeCC-CCCHHHHHHhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcE
Q 017021          113 FDY-RNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENV  176 (379)
Q Consensus       113 ~~~-~~~~~lv~e~~-~~sL~~~l~~~~--------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Ni  176 (379)
                      +.. +..+++||||| +|+|.+++....              ...+++..+..++.||+.||+|||++||+||||||+||
T Consensus        86 ~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NI  165 (299)
T d1ywna1          86 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI  165 (299)
T ss_dssp             ECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred             eccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccce
Confidence            654 55789999999 999999997542              12488999999999999999999999999999999999


Q ss_pred             EEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccc
Q 017021          177 LLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCD  251 (379)
Q Consensus       177 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sD  251 (379)
                      |++                           .++.+||+|||+|+......     ....||+.|+|||++.+..++.++|
T Consensus       166 Ll~---------------------------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sD  218 (299)
T d1ywna1         166 LLS---------------------------EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD  218 (299)
T ss_dssp             EEC---------------------------GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHH
T ss_pred             eEC---------------------------CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccc
Confidence            994                           44556667777665332221     2346899999999999999999999


Q ss_pred             hHhHHHHHHHHHhC-CCCCCCCchHHHHHH-HHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchh
Q 017021          252 IWSVGCILVELCTG-EALFQTHENLEHLAM-MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR  329 (379)
Q Consensus       252 vwSlG~il~~l~~g-~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (379)
                      ||||||++|+|++| .+||.+.+..+.... +.+...                      +..                  
T Consensus       219 iwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~----------------------~~~------------------  258 (299)
T d1ywna1         219 VWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR----------------------MRA------------------  258 (299)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCC----------------------CCC------------------
T ss_pred             eeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC----------------------CCC------------------
Confidence            99999999999986 567876554333222 222110                      111                  


Q ss_pred             hHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          330 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                              ++..++++.++|.+||+.||++|||++|+++|
T Consensus       259 --------~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         259 --------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------CccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                    12356789999999999999999999999986

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.4e-47  Score=359.91  Aligned_cols=308  Identities=31%  Similarity=0.509  Sum_probs=229.1

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCC------CCCeeEEeccee
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK------GGNRCVQIRNWF  113 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~------~~~~i~~~~~~~  113 (379)
                      +.+-.|+|+++||+|+||+||+|+++.+|+.||||+++..........+|+.++..+.+...      .|++++++++++
T Consensus        10 ~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~   89 (362)
T d1q8ya_          10 YKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF   89 (362)
T ss_dssp             ETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred             ccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEe
Confidence            44455999999999999999999999999999999998766666777889999998865432      357899999887


Q ss_pred             eec--ceEEEEEeCC--CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecccccccCC
Q 017021          114 DYR--NHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPD  188 (379)
Q Consensus       114 ~~~--~~~~lv~e~~--~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iiH~dlkp~Nili~~~~~~~~~~  188 (379)
                      ...  ...++++.++  +++............+++..+..++.||+.||.|||+ .||+||||||+|||++..+..    
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~----  165 (362)
T d1q8ya_          90 NHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSP----  165 (362)
T ss_dssp             EEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETT----
T ss_pred             eeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcc----
Confidence            653  4566666665  5555555555555678999999999999999999998 899999999999999654321    


Q ss_pred             CccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCC
Q 017021          189 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL  268 (379)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~p  268 (379)
                                       .....++++|||.+...........||+.|+|||++.+..++.++|+||+||++++|++|+.|
T Consensus       166 -----------------~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~p  228 (362)
T d1q8ya_         166 -----------------ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFL  228 (362)
T ss_dssp             -----------------TTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCC
T ss_pred             -----------------cccceeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCC
Confidence                             222458999999998777666777899999999999999999999999999999999999999


Q ss_pred             CCCCc------hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccch
Q 017021          269 FQTHE------NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  342 (379)
Q Consensus       269 f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (379)
                      |....      ..+........+|..|..++.............+............ .      ..............+
T Consensus       229 F~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~  301 (362)
T d1q8ya_         229 FEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWP-L------EDVLTEKYKFSKDEA  301 (362)
T ss_dssp             C---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCC-H------HHHHHHTTCCCHHHH
T ss_pred             CCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCc-h------hhhcccccccCcccC
Confidence            97542      3445566677788888887765544433332222111111100000 0      000001112233467


Q ss_pred             hHHHHHHhhccccCCCCCcCHHHHhcCCCCCCC
Q 017021          343 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  375 (379)
Q Consensus       343 ~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  375 (379)
                      +++.|||.+||++||.+||||+|+|+||||++.
T Consensus       302 ~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~  334 (362)
T d1q8ya_         302 KEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  334 (362)
T ss_dssp             HHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence            889999999999999999999999999999854

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-48  Score=357.75  Aligned_cols=246  Identities=20%  Similarity=0.236  Sum_probs=194.8

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCc----eEEEEEeec--cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKE----MVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  115 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~----~vAiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~  115 (379)
                      ...|++.++||+|+||+||+|.+..+|+    +||+|.++.  .......+.+|+.++.++     .|+||+++++++.+
T Consensus         8 ~~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~l~g~~~~   82 (317)
T d1xkka_           8 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-----DNPHVCRLLGICLT   82 (317)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHC-----CCTTBCCEEEEEES
T ss_pred             HHHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEec
Confidence            3458999999999999999999988876    588888863  234456788999999998     78999999999987


Q ss_pred             cceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCC
Q 017021          116 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  194 (379)
Q Consensus       116 ~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~  194 (379)
                      +. .+++++++ +++|.+.+.... ..+++..++.++.||+.||.|||++||+||||||+||+++.              
T Consensus        83 ~~-~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~--------------  146 (317)
T d1xkka_          83 ST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--------------  146 (317)
T ss_dssp             SS-EEEEEECCTTCBHHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE--------------
T ss_pred             CC-eeEEEEeccCCcccccccccc-cCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCC--------------
Confidence            65 56677777 999999887754 46899999999999999999999999999999999999954              


Q ss_pred             CCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh-CCCC
Q 017021          195 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL  268 (379)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~-g~~p  268 (379)
                                   ++.+||+|||++.......     ....||+.|+|||++.+..++.++|||||||++|||+| |..|
T Consensus       147 -------------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p  213 (317)
T d1xkka_         147 -------------PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP  213 (317)
T ss_dssp             -------------TTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             -------------CCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCC
Confidence                         4566777777765433322     12358999999999999999999999999999999998 8999


Q ss_pred             CCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          269 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      |.+.+..+....+.+...+                      +.                          ++.+++.+.+|
T Consensus       214 ~~~~~~~~~~~~i~~~~~~----------------------~~--------------------------p~~~~~~~~~l  245 (317)
T d1xkka_         214 YDGIPASEISSILEKGERL----------------------PQ--------------------------PPICTIDVYMI  245 (317)
T ss_dssp             TTTSCGGGHHHHHHHTCCC----------------------CC--------------------------CTTBCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCC----------------------CC--------------------------CcccCHHHHHH
Confidence            9876665554444332211                      11                          12366789999


Q ss_pred             HhhccccCCCCCcCHHHHhcC
Q 017021          349 LQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l~h  369 (379)
                      |.+||+.||.+|||+.|+++|
T Consensus       246 i~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         246 MVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhCCCChhhCcCHHHHHHH
Confidence            999999999999999999987

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-47  Score=348.38  Aligned_cols=250  Identities=20%  Similarity=0.293  Sum_probs=195.0

Q ss_pred             echhhhhhhhccccccceeEEEEEecCCC-------ceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEec
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDRERK-------EMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIR  110 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~-------~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~  110 (379)
                      ++.-.|++.+.||+|+||.||+|++..++       ..||||+++...  .....+..|...+.++    ..|+||++++
T Consensus        10 i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~----~~HpnIv~~~   85 (299)
T d1fgka_          10 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI----GKHKNIINLL   85 (299)
T ss_dssp             CCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH----CCCTTBCCEE
T ss_pred             ccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHh----cCCCeEEecc
Confidence            45567889999999999999999976654       479999996432  2345566677777776    3689999999


Q ss_pred             ceeeecceEEEEEeCC-CCCHHHHHHhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCc
Q 017021          111 NWFDYRNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPEN  175 (379)
Q Consensus       111 ~~~~~~~~~~lv~e~~-~~sL~~~l~~~~--------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~N  175 (379)
                      +++.+++.+++||||+ +|+|.+++....              ...+++..++.++.||+.||+|||+.||+||||||+|
T Consensus        86 ~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~N  165 (299)
T d1fgka_          86 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN  165 (299)
T ss_dssp             EEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             cccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccc
Confidence            9999999999999999 999999997543              2358999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCcc
Q 017021          176 VLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPC  250 (379)
Q Consensus       176 ili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~s  250 (379)
                      ||+                           +.++.+||+|||.+.......     ....||+.|+|||.+.+..|+.++
T Consensus       166 iLl---------------------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~  218 (299)
T d1fgka_         166 VLV---------------------------TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS  218 (299)
T ss_dssp             EEE---------------------------CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHH
T ss_pred             eee---------------------------cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchh
Confidence            999                           455566777777665432221     235688999999999999999999


Q ss_pred             chHhHHHHHHHHHh-CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchh
Q 017021          251 DIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR  329 (379)
Q Consensus       251 DvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (379)
                      |||||||++|+|++ |.+||...+..+....+....                      .+..|                 
T Consensus       219 DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~----------------------~~~~p-----------------  259 (299)
T d1fgka_         219 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH----------------------RMDKP-----------------  259 (299)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC----------------------CCCCC-----------------
T ss_pred             hhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCC----------------------CCCCC-----------------
Confidence            99999999999998 789998766655443332211                      11111                 


Q ss_pred             hHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          330 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                               ...++++.+||.+||+.||++||||+|+++
T Consensus       260 ---------~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         260 ---------SNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             ---------SSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------ccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence                     246678999999999999999999999985

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-48  Score=347.43  Aligned_cols=249  Identities=21%  Similarity=0.262  Sum_probs=190.8

Q ss_pred             eechhhhhhhhccccccceeEEEEEecC-CC--ceEEEEEeecc----chhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRE-RK--EMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~-~~--~~vAiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      .+....|++.+.||+|+||.||+|++.. ++  ..||||+++..    ......+.+|+.+++++     +|+||+++++
T Consensus         4 ~i~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l-----~H~nIv~~~g   78 (273)
T d1u46a_           4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-----DHRNLIRLYG   78 (273)
T ss_dssp             ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-----CCTTBCCEEE
T ss_pred             EEchHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhC-----CCCCEEEEEE
Confidence            3445678999999999999999998643 33  46899998642    33345678899999998     7899999999


Q ss_pred             eeeecceEEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCc
Q 017021          112 WFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  190 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~  190 (379)
                      ++.++ ..++||||+ ++++.+.+.... ..+++..++.++.||+.||.|||++||+||||||+||+++.+         
T Consensus        79 ~~~~~-~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~---------  147 (273)
T d1u46a_          79 VVLTP-PMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR---------  147 (273)
T ss_dssp             EECSS-SCEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET---------
T ss_pred             EEeec-chheeeeeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccc---------
Confidence            99764 678999999 899998877643 359999999999999999999999999999999999999544         


Q ss_pred             cCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHh
Q 017021          191 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT  264 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~  264 (379)
                                        ..+||+|||++.......      ....||..|+|||.+.+..++.++|||||||++|||++
T Consensus       148 ------------------~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt  209 (273)
T d1u46a_         148 ------------------DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT  209 (273)
T ss_dssp             ------------------TEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT
T ss_pred             ------------------cceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHh
Confidence                              456666666665433322      12357789999999999999999999999999999998


Q ss_pred             -CCCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchh
Q 017021          265 -GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  343 (379)
Q Consensus       265 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (379)
                       |+.||.+.+..+....+.+....++                     .                          ...+++
T Consensus       210 ~G~~Pf~~~~~~~~~~~i~~~~~~~~---------------------~--------------------------~~~~~~  242 (273)
T d1u46a_         210 YGQEPWIGLNGSQILHKIDKEGERLP---------------------R--------------------------PEDCPQ  242 (273)
T ss_dssp             TSCCTTTTCCHHHHHHHHHTSCCCCC---------------------C--------------------------CTTCCH
T ss_pred             CCCCCCCCcCHHHHHHHHHhCCCCCC---------------------C--------------------------cccccH
Confidence             8999998877766554433211111                     0                          123567


Q ss_pred             HHHHHHhhccccCCCCCcCHHHHhc
Q 017021          344 DLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       344 ~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                      .+.+||.+||+.||++|||++|+++
T Consensus       243 ~l~~li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         243 DIYNVMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHH
Confidence            8999999999999999999999863

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.4e-47  Score=348.11  Aligned_cols=258  Identities=24%  Similarity=0.304  Sum_probs=199.5

Q ss_pred             hhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEE
Q 017021           44 ADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  123 (379)
Q Consensus        44 ~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~  123 (379)
                      .|++.++||+|+||.||+|+++.+|+.||||++... .....+..|++++..+.    ++++++.+..++.+++..++||
T Consensus         8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-~~~~~~~~E~~i~~~l~----~~~~i~~~~~~~~~~~~~~ivm   82 (299)
T d1ckia_           8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK-TKHPQLHIESKIYKMMQ----GGVGIPTIRWCGAEGDYNVMVM   82 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESC-TTSCCHHHHHHHHHHST----TSTTCCCEEEEEEETTEEEEEE
T ss_pred             EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchh-ccCHHHHHHHHHHHHcc----CCCcccEEEEEEecCCEEEEEE
Confidence            589999999999999999999999999999998743 33456777898888873    3455777777888899999999


Q ss_pred             eCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcccc
Q 017021          124 EKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  203 (379)
Q Consensus       124 e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~  203 (379)
                      ||+++++.+.+.... ..+++..+..++.|++.||+|||++||+||||||+||++...                      
T Consensus        83 e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~----------------------  139 (299)
T d1ckia_          83 ELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG----------------------  139 (299)
T ss_dssp             ECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCG----------------------
T ss_pred             EEcCCchhhhhhhcc-CCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhcccccc----------------------
Confidence            999888888876644 469999999999999999999999999999999999998532                      


Q ss_pred             cCCCCCCeEEeecCcccccCCC----------CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          204 RMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       204 ~~~~~~~~~l~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                        +.+..++|+|||.|......          .....||+.|+|||.+.+..++.++|||||||++|+|++|+.||....
T Consensus       140 --~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~  217 (299)
T d1ckia_         140 --KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK  217 (299)
T ss_dssp             --GGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred             --CCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccc
Confidence              24456888888888653322          134579999999999999999999999999999999999999998755


Q ss_pred             hHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhcc
Q 017021          274 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  353 (379)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  353 (379)
                      ..+....+.+....                                         ..........+.+++++.++|..||
T Consensus       218 ~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~p~~~~~li~~cl  256 (299)
T d1ckia_         218 AATKRQKYERISEK-----------------------------------------KMSTPIEVLCKGYPSEFATYLNFCR  256 (299)
T ss_dssp             -------HHHHHHH-----------------------------------------HHHSCHHHHTTTSCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHhhcc-----------------------------------------cCCCChhHhccCCCHHHHHHHHHHc
Confidence            43332222111000                                         0000011223457788999999999


Q ss_pred             ccCCCCCcCHH---HHhcCCCC
Q 017021          354 RYDPTDRLTAR---EALRHPFF  372 (379)
Q Consensus       354 ~~dP~~Rpta~---e~l~hp~f  372 (379)
                      +.||++||+++   ++|+|+|.
T Consensus       257 ~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         257 SLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             HSCTTCCCCHHHHHHHHHHHHH
T ss_pred             cCChhHCcCHHHHHHHHHHHHH
Confidence            99999999987   45677654

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2e-47  Score=349.67  Aligned_cols=250  Identities=20%  Similarity=0.288  Sum_probs=201.4

Q ss_pred             eechhhhhhhhccccccceeEEEEEec-----CCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      .++.-.|++.++||+|+||+||+|+++     .+++.||||+++..  ......+.+|+.++.++     .|+|++.+++
T Consensus         9 e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l-----~h~niv~~~~   83 (301)
T d1lufa_           9 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-----DNPNIVKLLG   83 (301)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEE
T ss_pred             cCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhc-----CCCCccccee
Confidence            345567899999999999999999875     35688999999743  23356678899998887     7899999999


Q ss_pred             eeeecceEEEEEeCC-CCCHHHHHHhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcc
Q 017021          112 WFDYRNHICIVFEKL-GSSLYDFLRKNN----------------------YRSFPIDLVREIARQLLECIAFMHDLCMIH  168 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~~sL~~~l~~~~----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH  168 (379)
                      ++...+..+++|||+ +++|.+++....                      ...+++..+..++.|++.||+|||+.+++|
T Consensus        84 ~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivH  163 (301)
T d1lufa_          84 VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVH  163 (301)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             eeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEe
Confidence            999999999999999 899999997532                      123788899999999999999999999999


Q ss_pred             cCCCCCcEEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhC
Q 017021          169 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILG  243 (379)
Q Consensus       169 ~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~  243 (379)
                      |||||+||++                           +.+..+||+|||+|+......     ....||+.|+|||.+.+
T Consensus       164 rDlKp~NILl---------------------------d~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  216 (301)
T d1lufa_         164 RDLATRNCLV---------------------------GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY  216 (301)
T ss_dssp             SCCSGGGEEE---------------------------CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH
T ss_pred             eEEcccceEE---------------------------CCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHcc
Confidence            9999999999                           445567788888775332221     23468899999999999


Q ss_pred             CCCCCccchHhHHHHHHHHHhCC-CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhh
Q 017021          244 LGWTYPCDIWSVGCILVELCTGE-ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIK  322 (379)
Q Consensus       244 ~~~~~~sDvwSlG~il~~l~~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (379)
                      ..++.++|||||||++|||++|. +||...+..+....+.+..  .+                    +.           
T Consensus       217 ~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~--~~--------------------~~-----------  263 (301)
T d1lufa_         217 NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGN--IL--------------------AC-----------  263 (301)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC--CC--------------------CC-----------
T ss_pred             CCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCC--CC--------------------CC-----------
Confidence            99999999999999999999985 6788777666554433221  11                    11           


Q ss_pred             hhccchhhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          323 SVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                                     ++..++++.+||.+||+.||++|||+.||++
T Consensus       264 ---------------p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         264 ---------------PENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             ---------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------------CccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                           1245678999999999999999999999964

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-47  Score=349.97  Aligned_cols=248  Identities=22%  Similarity=0.263  Sum_probs=195.6

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCce--EEEEEeec--cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecce
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEM--VAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~--vAiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  118 (379)
                      -.|++.++||+|+||.||+|+++.+|..  ||||+++.  .......+.+|+.++.++    ..|+||+++++++.+++.
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l----~~HpnIv~~~~~~~~~~~   85 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL----GHHPNIINLLGACEHRGY   85 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTC----CCCTTBCCEEEEEEETTE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhc----cCCCCEeeEEEEEecCCe
Confidence            4667889999999999999999888764  67787753  223445677888888876    257999999999999999


Q ss_pred             EEEEEeCC-CCCHHHHHHhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccc
Q 017021          119 ICIVFEKL-GSSLYDFLRKN--------------NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEY  183 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~--------------~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~  183 (379)
                      .++||||+ +|+|.+++...              ....+++..+..++.||+.||.|||+.|++||||||+|||+     
T Consensus        86 ~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~-----  160 (309)
T d1fvra_          86 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV-----  160 (309)
T ss_dssp             EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE-----
T ss_pred             eEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEE-----
Confidence            99999999 99999999753              12468999999999999999999999999999999999999     


Q ss_pred             cccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC--CcccccCCccchhhhhCCCCCCccchHhHHHHHHH
Q 017021          184 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE  261 (379)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~  261 (379)
                                            +.+..+||+|||++.......  ....||..|+|||.+.+..++.++|||||||++|+
T Consensus       161 ----------------------~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~e  218 (309)
T d1fvra_         161 ----------------------GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE  218 (309)
T ss_dssp             ----------------------CGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             ----------------------cCCCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHH
Confidence                                  455567778888775433322  23468999999999999999999999999999999


Q ss_pred             HHhCC-CCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhcc
Q 017021          262 LCTGE-ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  340 (379)
Q Consensus       262 l~~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (379)
                      |++|. +||...+..+....+.+..                      .+..                          +..
T Consensus       219 ll~~~~~p~~~~~~~~~~~~i~~~~----------------------~~~~--------------------------~~~  250 (309)
T d1fvra_         219 IVSLGGTPYCGMTCAELYEKLPQGY----------------------RLEK--------------------------PLN  250 (309)
T ss_dssp             HHTTSCCTTTTCCHHHHHHHGGGTC----------------------CCCC--------------------------CTT
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHhcC----------------------CCCC--------------------------Ccc
Confidence            99965 6787666555433322110                      1111                          123


Q ss_pred             chhHHHHHHhhccccCCCCCcCHHHHhcC
Q 017021          341 SAGDLTHLLQGLLRYDPTDRLTAREALRH  369 (379)
Q Consensus       341 ~~~~~~~li~~~L~~dP~~Rpta~e~l~h  369 (379)
                      .++++.+||.+||+.||++|||++|+++|
T Consensus       251 ~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         251 CDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             BCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            66789999999999999999999999976

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-46  Score=343.17  Aligned_cols=250  Identities=24%  Similarity=0.342  Sum_probs=198.9

Q ss_pred             echhhhhhhhccccccceeEEEEEec-----CCCceEEEEEeecc--chhhHhHHHHHHHHHHHHhcCCCCCeeEEecce
Q 017021           40 FSAFADKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  112 (379)
Q Consensus        40 ~~~~~y~i~~~Lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~  112 (379)
                      ++...|++.++||+|+||.||+|+++     .+++.||+|+++..  ......+.+|+.++..+    .+|+||++++++
T Consensus        20 ~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l----~~HpnIv~~~g~   95 (311)
T d1t46a_          20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL----GNHMNIVNLLGA   95 (311)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHH----CCCTTBCCEEEE
T ss_pred             CCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhc----cCCCCEEEEEEE
Confidence            55567888999999999999999853     56789999999743  23445677888888887    368999999999


Q ss_pred             eeecceEEEEEeCC-CCCHHHHHHhCC----------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCc
Q 017021          113 FDYRNHICIVFEKL-GSSLYDFLRKNN----------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPEN  175 (379)
Q Consensus       113 ~~~~~~~~lv~e~~-~~sL~~~l~~~~----------------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~N  175 (379)
                      +.+++..++||||| +++|.+++....                ...+++..+..++.||+.||+|||++|++||||||+|
T Consensus        96 ~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~N  175 (311)
T d1t46a_          96 CTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN  175 (311)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccc
Confidence            99999999999999 999999997643                1248899999999999999999999999999999999


Q ss_pred             EEEecccccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCcc
Q 017021          176 VLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPC  250 (379)
Q Consensus       176 ili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~s  250 (379)
                      |+++.                           ++.++++|||.+.......     ....||+.|+|||.+.+..++.++
T Consensus       176 Il~~~---------------------------~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  228 (311)
T d1t46a_         176 ILLTH---------------------------GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES  228 (311)
T ss_dssp             EEEET---------------------------TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHH
T ss_pred             ccccc---------------------------cCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcc
Confidence            99954                           4556666666665433222     234789999999999998999999


Q ss_pred             chHhHHHHHHHHHh-CCCCCCCCchHHHHHHHH-HHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccch
Q 017021          251 DIWSVGCILVELCT-GEALFQTHENLEHLAMME-RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP  328 (379)
Q Consensus       251 DvwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (379)
                      |||||||++|+|++ |.+||.+.+..+....+. +...+..                                       
T Consensus       229 DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~---------------------------------------  269 (311)
T d1t46a_         229 DVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS---------------------------------------  269 (311)
T ss_dssp             HHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCC---------------------------------------
T ss_pred             cccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCC---------------------------------------
Confidence            99999999999998 677776655544433322 2111110                                       


Q ss_pred             hhHHHHHHhhccchhHHHHHHhhccccCCCCCcCHHHHhc
Q 017021          329 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  368 (379)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  368 (379)
                               ....+.++.+||.+||+.||.+|||++|+++
T Consensus       270 ---------~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         270 ---------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             ---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------cccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                     1235678999999999999999999999985

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=5e-46  Score=338.97  Aligned_cols=254  Identities=20%  Similarity=0.251  Sum_probs=200.5

Q ss_pred             hhhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           42 AFADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        42 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      +-.|+|.++||+|+||+||+|+++.+|+.||+|+++.. .....+.+|++.+..+.    ++++++.+++++..+...++
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-~~~~~~~~e~~~~~~l~----~~~~i~~~~~~~~~~~~~~~   78 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR-SDAPQLRDEYRTYKLLA----GCTGIPNVYYFGQEGLHNVL   78 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC-TTSCCHHHHHHHHHHTT----TCTTCCCEEEEEEETTEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccc-cCcHHHHHHHHHHHHhc----CCCCCCEEEEEeecCCccEE
Confidence            34689999999999999999999999999999998643 23445667888888873    34678888899999999999


Q ss_pred             EEeCCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCcc
Q 017021          122 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  201 (379)
Q Consensus       122 v~e~~~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~~  201 (379)
                      ||||++++|.+++.... ..++...+..++.|++.||.|||++||+||||||+||++.....                  
T Consensus        79 vme~~~~~l~~~~~~~~-~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~------------------  139 (293)
T d1csna_          79 VIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNS------------------  139 (293)
T ss_dssp             EEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSS------------------
T ss_pred             EEEecCCCHHHHHHhhc-cchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCccc------------------
Confidence            99999999999987754 46899999999999999999999999999999999999954210                  


Q ss_pred             cccCCCCCCeEEeecCcccccCCC----------CCcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCC
Q 017021          202 FKRMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  271 (379)
Q Consensus       202 ~~~~~~~~~~~l~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~  271 (379)
                          ...+.++|+|||.|+.....          .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus       140 ----~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~  215 (293)
T d1csna_         140 ----KNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG  215 (293)
T ss_dssp             ----TTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             ----ccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCC
Confidence                23567889999988643221          1335799999999999999999999999999999999999999976


Q ss_pred             CchH---HHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHH
Q 017021          272 HENL---EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  348 (379)
Q Consensus       272 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (379)
                      ....   +....+.......+                                            ..+.....++++.++
T Consensus       216 ~~~~~~~~~~~~i~~~~~~~~--------------------------------------------~~~l~~~~p~~l~~i  251 (293)
T d1csna_         216 LKAATNKQKYERIGEKKQSTP--------------------------------------------LRELCAGFPEEFYKY  251 (293)
T ss_dssp             CCSCCHHHHHHHHHHHHHHSC--------------------------------------------HHHHTTTSCHHHHHH
T ss_pred             ccchhHHHHHHHHHhccCCCC--------------------------------------------hHHhcCCCCHHHHHH
Confidence            4332   22211111100000                                            111223466789999


Q ss_pred             HhhccccCCCCCcCHHHHh
Q 017021          349 LQGLLRYDPTDRLTAREAL  367 (379)
Q Consensus       349 i~~~L~~dP~~Rpta~e~l  367 (379)
                      +..|+..+|++||+.+.+.
T Consensus       252 i~~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         252 MHYARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             HHHHHHCCTTCCCCHHHHH
T ss_pred             HHHHhcCCcccCcCHHHHH
Confidence            9999999999999876654

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-46  Score=345.31  Aligned_cols=256  Identities=22%  Similarity=0.307  Sum_probs=204.6

Q ss_pred             eechhhhhhhhccccccceeEEEEEecC-----CCceEEEEEeeccc--hhhHhHHHHHHHHHHHHhcCCCCCeeEEecc
Q 017021           39 VFSAFADKIHSKMGEGTFGQVLECWDRE-----RKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  111 (379)
Q Consensus        39 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~  111 (379)
                      .+..-.|++.++||+|+||+||+|.++.     ++..||||+++...  .....+.+|+.+++++     +|+||+++++
T Consensus        16 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l-----~h~nIv~~~~   90 (308)
T d1p4oa_          16 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-----NCHHVVRLLG   90 (308)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-----CCTTBCCEEE
T ss_pred             eecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHc-----CCCCEeeeee
Confidence            3555678899999999999999998753     46789999997432  2234567888888877     7899999999


Q ss_pred             eeeecceEEEEEeCC-CCCHHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccc
Q 017021          112 WFDYRNHICIVFEKL-GSSLYDFLRKNN--------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE  182 (379)
Q Consensus       112 ~~~~~~~~~lv~e~~-~~sL~~~l~~~~--------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~  182 (379)
                      .+..+...++||||+ +|+|.+++....        ...++...+..++.|++.||.|||+++|+||||||+|||+    
T Consensus        91 ~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLl----  166 (308)
T d1p4oa_          91 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV----  166 (308)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE----
T ss_pred             EEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceee----
Confidence            999999999999999 999999986421        1246888999999999999999999999999999999999    


Q ss_pred             ccccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCC-----CcccccCCccchhhhhCCCCCCccchHhHHH
Q 017021          183 YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGC  257 (379)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~  257 (379)
                                             +.+..+||+|||+++......     ....||+.|+|||.+.+..++.++|||||||
T Consensus       167 -----------------------d~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~  223 (308)
T d1p4oa_         167 -----------------------AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV  223 (308)
T ss_dssp             -----------------------CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             -----------------------cCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHH
Confidence                                   556677777887776433222     2236899999999999999999999999999


Q ss_pred             HHHHHHhC-CCCCCCCchHHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHH
Q 017021          258 ILVELCTG-EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ  336 (379)
Q Consensus       258 il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (379)
                      ++|+|++| ..||.+.+..+....+.+..                      .++.|                        
T Consensus       224 il~El~t~~~~p~~~~~~~~~~~~i~~~~----------------------~~~~p------------------------  257 (308)
T d1p4oa_         224 VLWEIATLAEQPYQGLSNEQVLRFVMEGG----------------------LLDKP------------------------  257 (308)
T ss_dssp             HHHHHHHTSCCTTTTSCHHHHHHHHHTTC----------------------CCCCC------------------------
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHhCC----------------------CCCCc------------------------
Confidence            99999997 57887766665554433211                      11111                        


Q ss_pred             hhccchhHHHHHHhhccccCCCCCcCHHHHhc------CCCCCC
Q 017021          337 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALR------HPFFTR  374 (379)
Q Consensus       337 ~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~------hp~f~~  374 (379)
                        +..++.+.++|.+||+.||++|||++|+++      +|+|++
T Consensus       258 --~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~  299 (308)
T d1p4oa_         258 --DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE  299 (308)
T ss_dssp             --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred             --ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcC
Confidence              235678999999999999999999999998      777654

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-45  Score=337.44  Aligned_cols=247  Identities=18%  Similarity=0.203  Sum_probs=190.5

Q ss_pred             hhccccccceeEEEEEecCCC---ceEEEEEeec--cchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeee-cceEEE
Q 017021           48 HSKMGEGTFGQVLECWDRERK---EMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-RNHICI  121 (379)
Q Consensus        48 ~~~Lg~G~~g~V~~~~~~~~~---~~vAiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~-~~~~~l  121 (379)
                      .++||+|+||+||+|++..++   ..||||+++.  .......+.+|+.++.++     .|+||+++++++.. ++..++
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~~~g~~~~~~~~~~l  106 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-----SHPNVLSLLGICLRSEGSPLV  106 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTC-----CCTTBCCCCEEEEETTTEEEE
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC-----CCCCEeEEeEEEEecCCceEE
Confidence            478999999999999986653   3699999863  334456788999999888     78999999998765 568999


Q ss_pred             EEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecccccccCCCccCCCCCCCCc
Q 017021          122 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  200 (379)
Q Consensus       122 v~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~~~~~~~~~~~~~~~~~  200 (379)
                      ||||| +++|.+++.... ..++...+..++.|++.||.|||+.+|+||||||+|||++                     
T Consensus       107 v~E~~~~g~l~~~~~~~~-~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~---------------------  164 (311)
T d1r0pa_         107 VLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD---------------------  164 (311)
T ss_dssp             EEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---------------------
T ss_pred             EEEEeecCchhhhhcccc-ccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeEC---------------------
Confidence            99999 899999887654 3578889999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCeEEeecCcccccCCCC-------CcccccCCccchhhhhCCCCCCccchHhHHHHHHHHHhCCCCCCCCc
Q 017021          201 YFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  273 (379)
Q Consensus       201 ~~~~~~~~~~~~l~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~~l~~g~~pf~~~~  273 (379)
                            .+..+||+|||+++......       ....||+.|+|||.+....++.++||||||+++|||++|..||....
T Consensus       165 ------~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~  238 (311)
T d1r0pa_         165 ------EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV  238 (311)
T ss_dssp             ------TTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC--
T ss_pred             ------CCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCC
Confidence                  45556666776665432221       22468899999999999899999999999999999999877776432


Q ss_pred             h-HHHHHHHHHHcCCCChhHHHhhhhhhhhhhccCCCCCCCCCCchhhhhhhccchhhHHHHHHhhccchhHHHHHHhhc
Q 017021          274 N-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  352 (379)
Q Consensus       274 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  352 (379)
                      . .+....+.+                      ...+..|                          +..++++.+||.+|
T Consensus       239 ~~~~~~~~i~~----------------------g~~~~~p--------------------------~~~~~~l~~li~~c  270 (311)
T d1r0pa_         239 NTFDITVYLLQ----------------------GRRLLQP--------------------------EYCPDPLYEVMLKC  270 (311)
T ss_dssp             ----CHHHHHT----------------------TCCCCCC--------------------------TTCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHc----------------------CCCCCCc--------------------------ccCcHHHHHHHHHH
Confidence            2 111111111                      1111111                          23567899999999


Q ss_pred             cccCCCCCcCHHHHhcC------CCCCCC
Q 017021          353 LRYDPTDRLTAREALRH------PFFTRD  375 (379)
Q Consensus       353 L~~dP~~Rpta~e~l~h------p~f~~~  375 (379)
                      |+.||++|||+.|+++|      .|..++
T Consensus       271 l~~dP~~RPs~~ei~~~L~~i~~~~~~~~  299 (311)
T d1r0pa_         271 WHPKAEMRPSFSELVSRISAIFSTFIGEH  299 (311)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred             cCCCHhHCcCHHHHHHHHHHHHHhhhhhh
Confidence            99999999999999998      666654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-45  Score=337.88  Aligned_cols=192  Identities=23%  Similarity=0.294  Sum_probs=152.2

Q ss_pred             hhhhhhhccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecc----e
Q 017021           43 FADKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN----H  118 (379)
Q Consensus        43 ~~y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~----~  118 (379)
                      ..|.+.++||+|+||.||+|+.  +|+.||||+++....  .....|.+++...   ..+|+||+++++++...+    .
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~--~~~~~e~ei~~~~---~~~HpnIv~~~~~~~~~~~~~~~   75 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE--RSWFREAEIYQTV---MLRHENILGFIAADNKDNGTWTQ   75 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGH--HHHHHHHHHHTST---TCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch--hHHHHHHHHHHHh---hCCCCcCcceEEEEEeCCCcceE
Confidence            4677889999999999999985  689999999975432  3334444433221   127899999999987643    6


Q ss_pred             EEEEEeCC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH--------cCCcccCCCCCcEEEecccccccCCC
Q 017021          119 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD--------LCMIHTDLKPENVLLVSSEYIKVPDY  189 (379)
Q Consensus       119 ~~lv~e~~-~~sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~--------~~iiH~dlkp~Nili~~~~~~~~~~~  189 (379)
                      +|+||||+ +++|.+++.+.   .+++.....++.|++.||.|+|+        .||+||||||+|||+           
T Consensus        76 ~~lv~Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl-----------  141 (303)
T d1vjya_          76 LWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV-----------  141 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEE-----------
T ss_pred             EEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEE-----------
Confidence            89999999 99999999875   48999999999999999999996        589999999999999           


Q ss_pred             ccCCCCCCCCcccccCCCCCCeEEeecCcccccCCC-------CCcccccCCccchhhhhCCC------CCCccchHhHH
Q 017021          190 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYIVSTRHYRAPEVILGLG------WTYPCDIWSVG  256 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~------~~~~sDvwSlG  256 (379)
                                      +.++.+||+|||++......       .....||+.|+|||++.+..      ++.++||||||
T Consensus       142 ----------------~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~G  205 (303)
T d1vjya_         142 ----------------KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG  205 (303)
T ss_dssp             ----------------CTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHH
T ss_pred             ----------------cCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhH
Confidence                            45566777777766543222       12357999999999987642      56789999999


Q ss_pred             HHHHHHHhCCCCCCC
Q 017021          257 CILVELCTGEALFQT  271 (379)
Q Consensus       257 ~il~~l~~g~~pf~~  271 (379)
                      |++|||+||..||..
T Consensus       206 vvl~el~tg~~~~~~  220 (303)
T d1vjya_         206 LVFWEIARRCSIGGI  220 (303)
T ss_dssp             HHHHHHHHTBCBTTB
T ss_pred             HHHHHHhhCCCCCCc
Confidence            999999999888754

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.89  E-value=4.8e-24  Score=180.62  Aligned_cols=163  Identities=23%  Similarity=0.282  Sum_probs=109.1

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeeccch-------------------hhHhHHHHHHHHHHHHhcCCCCCe
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-------------------YREAAMIEIEVLQQLAKHDKGGNR  105 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------------------~~~~~~~e~~~l~~l~~~~~~~~~  105 (379)
                      |-|.++||+|+||+||+|++. +|+.||||+++....                   .......|...+.++     .+.+
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~   75 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-----QGLA   75 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-----TTSS
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc-----cCCC
Confidence            346789999999999999975 689999998752110                   112223455566555     4455


Q ss_pred             eEEecceeeecceEEEEEeCCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEeccccc
Q 017021          106 CVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI  184 (379)
Q Consensus       106 i~~~~~~~~~~~~~~lv~e~~~~-sL~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH~dlkp~Nili~~~~~~  184 (379)
                      ++..++..    ..+++||++++ .+.         .++...+..++.|++.+|+|||++||+||||||+|||+.+    
T Consensus        76 v~~~~~~~----~~~lvme~~~~~~~~---------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~----  138 (191)
T d1zara2          76 VPKVYAWE----GNAVLMELIDAKELY---------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE----  138 (191)
T ss_dssp             SCCEEEEE----TTEEEEECCCCEEGG---------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET----
T ss_pred             cceEEEec----CCEEEEEeecccccc---------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeC----
Confidence            55544332    23799999943 332         2444556788999999999999999999999999999943    


Q ss_pred             ccCCCccCCCCCCCCcccccCCCCCCeEEeecCcccccCCCCCcccccCCccch--h---hhhCCCCCCccchHhHHHHH
Q 017021          185 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAP--E---VILGLGWTYPCDIWSVGCIL  259 (379)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~gt~~y~aP--E---~~~~~~~~~~sDvwSlG~il  259 (379)
                                              ..++|+|||.|.....+..     ..|...  +   ......|+.++|+||+.--+
T Consensus       139 ------------------------~~~~liDFG~a~~~~~~~~-----~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         139 ------------------------EGIWIIDFPQSVEVGEEGW-----REILERDVRNIITYFSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             ------------------------TEEEECCCTTCEETTSTTH-----HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred             ------------------------CCEEEEECCCcccCCCCCc-----HHHHHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence                                    2378999998865443221     111111  0   01235688999999976433

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.27  E-value=2e-06  Score=74.03  Aligned_cols=83  Identities=8%  Similarity=-0.024  Sum_probs=55.2

Q ss_pred             hhhhhccccccceeEEEEEecCCCceEEEEEeeccch-hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEE
Q 017021           45 DKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  123 (379)
Q Consensus        45 y~i~~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~  123 (379)
                      |++.+..+.++.+.||+..  .+++.+++|+...... .......|...+..+..    +..+++++.+.+.++..++||
T Consensus        16 ~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~----~vpvP~vl~~~~~~~~~~lv~   89 (263)
T d1j7la_          16 YRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKGTTYDVEREKDMMLWLEG----KLPVPKVLHFERHDGWSNLLM   89 (263)
T ss_dssp             SEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT----TSCCCCEEEEEEETTEEEEEE
T ss_pred             eEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhc----cCCCCcEEEEEecCCceEEEE
Confidence            3444444444557899885  4566688998864322 23345678888877743    234677777778888999999


Q ss_pred             eCC-CCCHHHH
Q 017021          124 EKL-GSSLYDF  133 (379)
Q Consensus       124 e~~-~~sL~~~  133 (379)
                      ++. |.++.+.
T Consensus        90 ~~l~G~~~~~~  100 (263)
T d1j7la_          90 SEADGVLCSEE  100 (263)
T ss_dssp             ECCSSEEHHHH
T ss_pred             Eeccccccccc
Confidence            999 6666544

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.58  E-value=7.9e-05  Score=63.27  Aligned_cols=75  Identities=13%  Similarity=0.103  Sum_probs=51.0

Q ss_pred             cccccc-ceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEEEEeCC-C
Q 017021           50 KMGEGT-FGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-G  127 (379)
Q Consensus        50 ~Lg~G~-~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~  127 (379)
                      .+..|. .+.||+... .++..+++|......  ......|...+..+....   ..+++++....+++..++||+++ |
T Consensus        17 ~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~g---vpvP~v~~~~~~~~~~~~v~~~i~G   90 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA--LNELQDEAARLSWLATTG---VPCAAVLDVVTEAGRDWLLLGEVPG   90 (255)
T ss_dssp             ECSCTTSSCEEEEEEC-TTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTTT---CCBCCEEEEEECSSCEEEEEECCSS
T ss_pred             EcCCcccCCeEEEEEe-CCCCEEEEEeCCccC--HhHHHHHHHHHHHHHhcC---CCCCceeeecccccceEEEEEeeec
Confidence            334444 367899874 446668999876432  334566888888876533   34677777777788899999999 5


Q ss_pred             CCH
Q 017021          128 SSL  130 (379)
Q Consensus       128 ~sL  130 (379)
                      .++
T Consensus        91 ~~~   93 (255)
T d1nd4a_          91 QDL   93 (255)
T ss_dssp             EET
T ss_pred             ccc
Confidence            443

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.58  E-value=0.00013  Score=66.48  Aligned_cols=74  Identities=20%  Similarity=0.240  Sum_probs=45.7

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeec-----cch---hhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEE
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRG-----IKK---YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  120 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~---~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  120 (379)
                      +.||.|....||++.+..+++.|++|.-..     .+.   ...+...|...+..+.....  ..+++++.+  ++...+
T Consensus        32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p--~~vP~v~~~--d~~~~~  107 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVP--HLVPRVFYS--DTEMAV  107 (392)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCG--GGSCCEEEE--ETTTTE
T ss_pred             EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCC--CCcceEEEE--cCCCCE
Confidence            568999999999999888788999997431     111   12334568888877754321  235555533  344567


Q ss_pred             EEEeCC
Q 017021          121 IVFEKL  126 (379)
Q Consensus       121 lv~e~~  126 (379)
                      +|||++
T Consensus       108 lvmE~L  113 (392)
T d2pula1         108 TVMEDL  113 (392)
T ss_dssp             EEECCC
T ss_pred             EEEecc
Confidence            899999

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.05  E-value=0.0043  Score=54.38  Aligned_cols=69  Identities=16%  Similarity=0.183  Sum_probs=46.5

Q ss_pred             eeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEe--cceeeecceEEEEEeCC
Q 017021           57 GQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI--RNWFDYRNHICIVFEKL  126 (379)
Q Consensus        57 g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~--~~~~~~~~~~~lv~e~~  126 (379)
                      -.||+++. ++|+.|++|+..........+..|...+..+.......+..+..  -..+...+..+.++++.
T Consensus        36 N~vy~v~~-~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~  106 (325)
T d1zyla1          36 NRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV  106 (325)
T ss_dssp             SEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             ceeEEEEc-CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeec
Confidence            47999974 56888999998754444566778999999987754322222222  12334567788899988

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.16  E-value=0.0084  Score=52.00  Aligned_cols=53  Identities=11%  Similarity=0.093  Sum_probs=31.2

Q ss_pred             hccccccceeEEEEEecCCCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCC
Q 017021           49 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN  104 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~  104 (379)
                      +.|..|---+.|+.+..  +..+++|++... ........|+..+..+.......|
T Consensus        24 ~~i~~G~~N~ny~v~t~--~g~yVLri~~~~-~~~~~l~~~~~~l~~L~~~g~pvp   76 (316)
T d2ppqa1          24 KGIAEGVENSNFLLHTT--KDPLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCP   76 (316)
T ss_dssp             EEECC---EEEEEEEES--SCCEEEEEECC----CCHHHHHHHHHHHHHHTTCCCC
T ss_pred             ecCCCCcccCeEEEEEC--CCcEEEEEcCCC-CCHHHHHHHHHHHHhhhhcccccc
Confidence            34456666788998743  345999998643 233445557888888877654433

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.09  E-value=0.0078  Score=54.18  Aligned_cols=69  Identities=13%  Similarity=0.146  Sum_probs=45.1

Q ss_pred             hccccccceeEEEEEecC-------CCceEEEEEeeccchhhHhHHHHHHHHHHHHhcCCCCCeeEEecceeeecceEEE
Q 017021           49 SKMGEGTFGQVLECWDRE-------RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  121 (379)
Q Consensus        49 ~~Lg~G~~g~V~~~~~~~-------~~~~vAiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  121 (379)
                      ++|+.|-.-.+|++....       ..+.|.+++.-. ........+|..+++.+.....    .++++.++..    ++
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-~~~~idr~~E~~i~~~ls~~gl----~Pkll~~~~~----g~  118 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-PETESHLVAESVIFTLLSERHL----GPKLYGIFSG----GR  118 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-CCCHHHHHHHHHHHHHHHHTTS----SSCEEEEETT----EE
T ss_pred             EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-cchhhHHHHHHHHHHHHHhCCC----CCeEEEEcCC----ce
Confidence            567778888999998653       346688888753 2233445578888888866432    3445555532    57


Q ss_pred             EEeCC
Q 017021          122 VFEKL  126 (379)
Q Consensus       122 v~e~~  126 (379)
                      |++|+
T Consensus       119 I~efi  123 (395)
T d1nw1a_         119 LEEYI  123 (395)
T ss_dssp             EECCC
T ss_pred             EEEEe
Confidence            88888