Your job contains 1 sequence.
>017023
MAAYMPQTENPSPAIYIPREWSDAADSIAYDSNTSPPPIAFICGAKNCGKTTFSRHLVNV
LLQRYKKVAYLDTDVGQPEFTAPGFLSLTVVDTLTPDLTIPCLKTPKRCYFFGDVSSKRD
PTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKYITP
THVVKINISFEKKNLPAGAFWLDNFEGVDVNLIEISSARQDSFNRSVLVQKDARLLRDLR
IMAYFRQCFPSDLNITIIKELAQALAAYPPYQVPISSIKIRHLYCQVPRSEIFYSLNATI
VGLAISSDASENLPHCVGLGIVRGIDTLKGLLYVITPVPPGILEKVDLFLQGFIQIPTCL
LQVQGCMSPYMSANVLPTS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017023
(379 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2183830 - symbol:AT5G11010 species:3702 "Arabi... 1203 2.4e-122 1
UNIPROTKB|E1BPN0 - symbol:NOL9 "Polynucleotide 5'-hydroxy... 227 5.9e-34 2
UNIPROTKB|Q5SY16 - symbol:NOL9 "Polynucleotide 5'-hydroxy... 231 1.4e-32 2
UNIPROTKB|E2R0I7 - symbol:NOL9 "Uncharacterized protein" ... 229 4.0e-32 2
UNIPROTKB|I3LBV6 - symbol:NOL9 "Uncharacterized protein" ... 224 1.8e-31 2
MGI|MGI:1921285 - symbol:Nol9 "nucleolar protein 9" speci... 207 1.9e-29 2
UNIPROTKB|G3V7B0 - symbol:Nol9 "Protein Nol9" species:101... 211 3.3e-29 2
DICTYBASE|DDB_G0277945 - symbol:nol9 "NUC156 family prote... 242 1.6e-27 2
POMBASE|SPCC830.03 - symbol:grc3 "polynucleotide kinase G... 255 4.4e-21 2
RGD|1566167 - symbol:Nol9 "nucleolar protein 9" species:1... 185 2.1e-19 2
UNIPROTKB|Q4IR18 - symbol:GRC3 "Polynucleotide 5'-hydroxy... 215 6.2e-17 2
UNIPROTKB|P0CM78 - symbol:GRC3 "Polynucleotide 5'-hydroxy... 214 2.3e-16 2
UNIPROTKB|P0CM79 - symbol:GRC3 "Polynucleotide 5'-hydroxy... 214 2.3e-16 2
UNIPROTKB|Q0CKU1 - symbol:grc3 "Polynucleotide 5'-hydroxy... 199 7.7e-15 2
UNIPROTKB|Q4WID9 - symbol:grc3 "Polynucleotide 5'-hydroxy... 181 3.7e-14 2
UNIPROTKB|A1CYR9 - symbol:grc3 "Polynucleotide 5'-hydroxy... 179 3.8e-14 2
UNIPROTKB|A2QNQ8 - symbol:grc3 "Polynucleotide 5'-hydroxy... 182 8.7e-14 2
UNIPROTKB|A8WQV9 - symbol:nol-9 "Polynucleotide 5'-hydrox... 195 1.4e-12 1
UNIPROTKB|A1CFB5 - symbol:grc3 "Polynucleotide 5'-hydroxy... 173 5.3e-12 2
SGD|S000003958 - symbol:GRC3 "Polynucleotide kinase prese... 181 2.6e-11 2
CGD|CAL0001772 - symbol:orf19.721 species:5476 "Candida a... 185 2.7e-11 1
UNIPROTKB|Q59U11 - symbol:GRC3 "Polynucleotide 5'-hydroxy... 185 2.7e-11 1
UNIPROTKB|Q6BQV7 - symbol:GRC3 "Polynucleotide 5'-hydroxy... 183 4.5e-11 1
WB|WBGene00010709 - symbol:nol-9 species:6239 "Caenorhabd... 176 1.9e-10 1
UNIPROTKB|Q9U3B6 - symbol:nol-9 "Polynucleotide 5'-hydrox... 176 1.9e-10 1
UNIPROTKB|Q6CQ06 - symbol:GRC3 "Polynucleotide 5'-hydroxy... 174 2.1e-10 2
UNIPROTKB|Q2U0C4 - symbol:grc3 "Polynucleotide 5'-hydroxy... 178 2.2e-10 1
UNIPROTKB|Q6FW56 - symbol:GRC3 "Polynucleotide 5'-hydroxy... 174 4.1e-10 1
ASPGD|ASPL0000076763 - symbol:AN4599 species:162425 "Emer... 156 6.1e-08 2
UNIPROTKB|Q5B4D1 - symbol:grc3 "Polynucleotide 5'-hydroxy... 156 6.1e-08 2
UNIPROTKB|Q6C5P9 - symbol:GRC3 "Polynucleotide 5'-hydroxy... 143 1.1e-06 1
TAIR|locus:2084938 - symbol:CLPS3 "CLP-similar protein 3"... 135 5.2e-06 1
UNIPROTKB|F1NA64 - symbol:CLP1 "Polyribonucleotide 5'-hyd... 132 1.0e-05 1
UNIPROTKB|Q5ZJL4 - symbol:CLP1 "Polyribonucleotide 5'-hyd... 132 1.0e-05 1
UNIPROTKB|B4MRZ9 - symbol:cbc "Protein CLP1 homolog" spec... 129 2.2e-05 1
UNIPROTKB|B4KML2 - symbol:cbc "Protein CLP1 homolog" spec... 125 6.2e-05 1
MGI|MGI:2138968 - symbol:Clp1 "CLP1, cleavage and polyade... 124 8.0e-05 1
RGD|1307679 - symbol:Clp1 "cleavage and polyadenylation f... 124 8.0e-05 1
FB|FBgn0033842 - symbol:cbc "crowded by cid" species:7227... 122 0.00013 1
UNIPROTKB|B4HQJ2 - symbol:cbc "Protein CLP1 homolog" spec... 122 0.00013 1
UNIPROTKB|B4QEE3 - symbol:cbc "Protein CLP1 homolog" spec... 122 0.00013 1
UNIPROTKB|A2VE01 - symbol:CLP1 "Polyribonucleotide 5'-hyd... 122 0.00013 1
UNIPROTKB|E2R321 - symbol:CLP1 "Uncharacterized protein" ... 122 0.00013 1
UNIPROTKB|Q92989 - symbol:CLP1 "Polyribonucleotide 5'-hyd... 122 0.00013 1
UNIPROTKB|F2Z5N4 - symbol:CLP1 "Uncharacterized protein" ... 122 0.00013 1
UNIPROTKB|Q4R7R3 - symbol:CLP1 "Polyribonucleotide 5'-hyd... 122 0.00013 1
UNIPROTKB|B3MGZ0 - symbol:cbc "Protein CLP1 homolog" spec... 121 0.00017 1
UNIPROTKB|B4P4H2 - symbol:cbc "Protein CLP1 homolog" spec... 120 0.00022 1
UNIPROTKB|B4GGT6 - symbol:cbc "Protein CLP1 homolog" spec... 120 0.00023 1
UNIPROTKB|Q28ZT4 - symbol:cbc "Protein CLP1 homolog" spec... 120 0.00023 1
UNIPROTKB|B4JVN0 - symbol:cbc "Protein CLP1 homolog" spec... 117 0.00048 1
UNIPROTKB|Q753Y3 - symbol:GRC3 "Polynucleotide 5'-hydroxy... 119 0.00052 1
UNIPROTKB|B3NRK6 - symbol:cbc "Protein CLP1 homolog" spec... 116 0.00062 1
UNIPROTKB|Q66JK4 - symbol:clp1 "Polyribonucleotide 5'-hyd... 111 0.00069 2
UNIPROTKB|B4MCL6 - symbol:cbc "Protein CLP1 homolog" spec... 115 0.00081 1
>TAIR|locus:2183830 [details] [associations]
symbol:AT5G11010 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006777 "Mo-molybdopterin cofactor biosynthetic
process" evidence=IEA] GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006364 EMBL:AL365234
InterPro:IPR010655 Pfam:PF06807 eggNOG:COG1341 GO:GO:0051731
EMBL:AY070379 EMBL:AY096562 EMBL:AF412075 IPI:IPI00524172
IPI:IPI00531789 PIR:T50810 RefSeq:NP_568243.1 RefSeq:NP_850805.1
RefSeq:NP_974765.1 UniGene:At.26406 UniGene:At.65836
ProteinModelPortal:Q8VYP6 SMR:Q8VYP6 PaxDb:Q8VYP6 PRIDE:Q8VYP6
EnsemblPlants:AT5G11010.2 EnsemblPlants:AT5G11010.3 GeneID:830968
KEGG:ath:AT5G11010 TAIR:At5g11010 HOGENOM:HOG000237585
InParanoid:Q8VYP6 OMA:TPERCFF PhylomeDB:Q8VYP6
ProtClustDB:CLSN2689597 Genevestigator:Q8VYP6 Uniprot:Q8VYP6
Length = 368
Score = 1203 (428.5 bits), Expect = 2.4e-122, P = 2.4e-122
Identities = 227/377 (60%), Positives = 291/377 (77%)
Query: 5 MPQTENPSPAIYIPREWSDAADSIAYDSNTSPPPIAFICGAKNCGKTTFSRHLVNVLLQR 64
M + EN P +IP EWS+AA S++ S P IA +CG KN GK+TFSR+LV VLLQR
Sbjct: 1 MSEAENKLP--FIPEEWSNAASSVSCSS--LQPVIALVCGPKNSGKSTFSRNLVEVLLQR 56
Query: 65 YKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXXX--XIPCLKTPKRCYFFGDVSSKRDPT 122
YK+VAYLDTDVGQPEFTAPGF +PC+KTP+RC+F+GDVSSKRDP
Sbjct: 57 YKRVAYLDTDVGQPEFTAPGFLSLTIVDKSILESDWTVPCVKTPERCFFYGDVSSKRDPK 116
Query: 123 AYLKYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKYITPTH 182
AYL+Y+ TL+DYY+ + +E+ +TELPL++NTPGWVKGIGY++LVD+L+Y++P+H
Sbjct: 117 AYLRYVYTLFDYYQLHFCKSSEN----KTELPLVINTPGWVKGIGYELLVDVLRYVSPSH 172
Query: 183 VVKINISFEKKNLPAGAFWLDNFEGVDVNLIEISSARQDSFNRSVLVQKDARLLRDLRIM 242
VVKINIS KNLPAG FWLD + +LIEI SA QD +N+S+L+ KDARL+RD+RI+
Sbjct: 173 VVKINISAYNKNLPAGLFWLDGNDDETAHLIEIQSAYQDRYNQSILIHKDARLMRDMRII 232
Query: 243 AYFRQCFPSDLNITIIKELAQALAAYPPYQVPISSIKIRHLYCQVPRSEIFYSLNATIVG 302
AYFRQCF + IKEL LA++ PY+VPISS+ I HL+CQ+P SE++YSLNA+IVG
Sbjct: 233 AYFRQCFKGK-EVNTIKELTHELASHIPYEVPISSLTINHLHCQIPSSEVYYSLNASIVG 291
Query: 303 LAISSDASENLPHCVGLGIVRGIDTLKGLLYVITPVPPGILEKVDLFLQGFIQIPTCLLQ 362
L IS++ E+LP CVGLGIVRGIDT +G+LYVITPVP ++EKVDL LQG+IQ+PTCLL+
Sbjct: 292 LGISTEVFEDLPSCVGLGIVRGIDTERGILYVITPVPENLVEKVDLLLQGYIQLPTCLLE 351
Query: 363 VQGCMSPYMSANVLPTS 379
V+ SPY+SANVL ++
Sbjct: 352 VKDYRSPYLSANVLAST 368
>UNIPROTKB|E1BPN0 [details] [associations]
symbol:NOL9 "Polynucleotide 5'-hydroxyl-kinase NOL9"
species:9913 "Bos taurus" [GO:0000460 "maturation of 5.8S rRNA"
evidence=ISS] [GO:0051731 "polynucleotide 5'-hydroxyl-kinase
activity" evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
GO:GO:0000460 InterPro:IPR010655 Pfam:PF06807 GO:GO:0051731
EMBL:AAFC03030715 IPI:IPI00714831 RefSeq:NP_001193528.1
UniGene:Bt.103226 Ensembl:ENSBTAT00000022240 GeneID:523474
KEGG:bta:523474 CTD:79707 GeneTree:ENSGT00390000012406 OMA:TISQGQP
NextBio:20873752 Uniprot:E1BPN0
Length = 694
Score = 227 (85.0 bits), Expect = 5.9e-34, Sum P(2) = 5.9e-34
Identities = 52/172 (30%), Positives = 91/172 (52%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P+ +CG ++ GK+TF+R+L+N LL V YL+ D+GQ EFT PG
Sbjct: 292 PVILVCGCQDIGKSTFNRYLINQLLNSVSCVDYLECDLGQTEFTPPGCISLLNITEPVLG 351
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
+TP++ ++G S K + Y++ I ++ Y++E PLI+
Sbjct: 352 PPFTHQRTPQKMVYYGKTSCKNNFENYIEVIKYVFSSYKRES--------------PLII 397
Query: 158 NTPGWVKGIGYDILVDMLKYITPTHVVKINISFEKKNLP-AGAFWLDNFEGV 208
NT GWV G +L+D+++ ++P+HVV+ + S K +P ++D+ +G+
Sbjct: 398 NTMGWVADQGLLLLIDLIRLLSPSHVVQFS-SDRSKYMPDLTPDFVDDMDGL 448
Score = 211 (79.3 bits), Expect = 5.9e-34, Sum P(2) = 5.9e-34
Identities = 56/156 (35%), Positives = 84/156 (53%)
Query: 234 RLLRDLRIMAYFRQCFPSDLNITIIKELAQALAAYPPYQVPISSIKIRHLYCQVPRSEIF 293
R+LR+L ++ Y Q P + K L +AL PYQVP +++ +R ++ V + I
Sbjct: 509 RILRELAVLGYLSQLQPP-----VPKPL-RALHGLTPYQVPFNAVALRIIHADVAPTHIL 562
Query: 294 YSLNATIVGLA-ISSD-----------ASENLPHCVGLGIVRGIDTLKGLLYVITPVPPG 341
Y++NA+ VGL I D A + CVG GI RGID K L +++TPVPP
Sbjct: 563 YAVNASWVGLCKILDDVRGYASGPILLAQSPICDCVGFGICRGIDMEKKLYHILTPVPPE 622
Query: 342 ILEKVDLFLQGFIQIPTCLLQVQGCMS---PYMSAN 374
L V+ L G + IP C+L+ QG + PY++ +
Sbjct: 623 ELRHVNCLLVGAVNIPQCVLKSQGGLEGTIPYVTTD 658
>UNIPROTKB|Q5SY16 [details] [associations]
symbol:NOL9 "Polynucleotide 5'-hydroxyl-kinase NOL9"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0000460 "maturation of
5.8S rRNA" evidence=IMP] [GO:0051731 "polynucleotide
5'-hydroxyl-kinase activity" evidence=IDA] [GO:0005730 "nucleolus"
evidence=TAS] GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
GO:GO:0000460 InterPro:IPR010655 Pfam:PF06807 eggNOG:COG1341
GO:GO:0051731 EMBL:AL591866 CTD:79707 OMA:TISQGQP EMBL:AK026976
EMBL:AK289653 EMBL:BC009257 EMBL:BC012439 EMBL:BC063639
EMBL:BC094836 EMBL:BC105095 EMBL:BC110849 EMBL:BC112278
IPI:IPI00002902 RefSeq:NP_078930.3 UniGene:Hs.59425
ProteinModelPortal:Q5SY16 SMR:Q5SY16 STRING:Q5SY16
PhosphoSite:Q5SY16 DMDM:73921242 SWISS-2DPAGE:Q5SY16 PaxDb:Q5SY16
PeptideAtlas:Q5SY16 PRIDE:Q5SY16 DNASU:79707
Ensembl:ENST00000377705 GeneID:79707 KEGG:hsa:79707 UCSC:uc001ans.3
GeneCards:GC01M006581 HGNC:HGNC:26265 neXtProt:NX_Q5SY16
PharmGKB:PA142671256 HOGENOM:HOG000113821 HOVERGEN:HBG058105
InParanoid:Q5SY16 OrthoDB:EOG45HRWZ PhylomeDB:Q5SY16 ChiTaRS:NOL9
GenomeRNAi:79707 NextBio:69023 Bgee:Q5SY16 CleanEx:HS_NOL9
Genevestigator:Q5SY16 GermOnline:ENSG00000162408 Uniprot:Q5SY16
Length = 702
Score = 231 (86.4 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 58/172 (33%), Positives = 93/172 (54%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P+ +CG+++ GK+TF+R+L+N LL V YL+ D+GQ EFT PG
Sbjct: 300 PVILVCGSQDVGKSTFNRYLINHLLNSLPCVDYLECDLGQTEFTPPGCISLLNITEPVLG 359
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
L+TP++ ++G S K + Y YI D + Y+F S + E PLIV
Sbjct: 360 PPFTHLRTPQKMVYYGKPSCKNN---YENYI----DIVK---YVF----SAYKRESPLIV 405
Query: 158 NTPGWVKGIGYDILVDMLKYITPTHVVKINISFEKKNLP-AGAFWLDNFEGV 208
NT GWV G +L+D+++ ++P+HVV+ S K +P ++D+ +G+
Sbjct: 406 NTMGWVSDQGLLLLIDLIRLLSPSHVVQFR-SDHSKYMPDLTPQYVDDMDGL 456
Score = 193 (73.0 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 54/143 (37%), Positives = 77/143 (53%)
Query: 234 RLLRDLRIMAYFRQCFPSDLNITIIKELAQALAAYPPYQVPISSIKIRHLYCQVPRSEIF 293
++LRDL I++Y Q P + K L+ L + PYQVP +++ +R + V + I
Sbjct: 517 KILRDLSILSYLSQLQPP-----MPKPLSP-LHSLTPYQVPFNAVALRITHSDVAPTHIL 570
Query: 294 YSLNATIVGLA-ISSDAS--ENLP---------HCVGLGIVRGIDTLKGLLYVITPVPPG 341
Y++NA+ VGL I D N P C+G GI RGID K L +++TPVPP
Sbjct: 571 YAVNASWVGLCKIQDDVRGYTNGPILLAQTPICDCLGFGICRGIDMEKRLYHILTPVPPE 630
Query: 342 ILEKVDLFLQGFIQIPTCLLQVQ 364
L V+ L G I IP C+L+ Q
Sbjct: 631 ELRTVNCLLVGAIAIPHCVLKCQ 653
>UNIPROTKB|E2R0I7 [details] [associations]
symbol:NOL9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051731 "polynucleotide 5'-hydroxyl-kinase
activity" evidence=IEA] [GO:0000460 "maturation of 5.8S rRNA"
evidence=IEA] GO:GO:0000460 InterPro:IPR010655 Pfam:PF06807
GO:GO:0051731 GeneTree:ENSGT00390000012406 OMA:TISQGQP
EMBL:AAEX03003905 Ensembl:ENSCAFT00000031165 Uniprot:E2R0I7
Length = 520
Score = 229 (85.7 bits), Expect = 4.0e-32, Sum P(2) = 4.0e-32
Identities = 52/172 (30%), Positives = 92/172 (53%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P+ +CG+++ GK+TF+R+L+N LL + YL+ D+GQ EFT PG
Sbjct: 118 PVILVCGSQDVGKSTFNRYLINQLLNSISCIDYLECDLGQTEFTPPGCISLLNITEPILG 177
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
+TP++ ++G S K + Y++ I ++ Y++E PLIV
Sbjct: 178 PPFTHQRTPQKMVYYGKPSCKNNYENYIEIIKYVFSSYKRES--------------PLIV 223
Query: 158 NTPGWVKGIGYDILVDMLKYITPTHVVKINISFEKKNLP-AGAFWLDNFEGV 208
NT GWV G +L+D+++ ++P+HVV+ + S K +P ++D+ +G+
Sbjct: 224 NTMGWVSDKGLLLLIDLIRLLSPSHVVQFS-SGRSKYMPNLTPDYVDDMDGL 274
Score = 186 (70.5 bits), Expect = 4.0e-32, Sum P(2) = 4.0e-32
Identities = 53/156 (33%), Positives = 80/156 (51%)
Query: 234 RLLRDLRIMAYFRQCFPSDLNITIIKELAQALAAYPPYQVPISSIKIRHLYCQVPRSEIF 293
++LRDL ++ Y Q P + + L L PYQVP +++ +R ++ V + I
Sbjct: 335 KVLRDLAVLGYLGQLQPP-----VPRPLCP-LHGLTPYQVPFNAVALRIIHADVAPTHIL 388
Query: 294 YSLNATIVGLA-ISSDAS--ENLP---------HCVGLGIVRGIDTLKGLLYVITPVPPG 341
Y++NA+ VGL I D N P C+G GI RGID K L +++TPVPP
Sbjct: 389 YAVNASWVGLCKILDDVRGYANGPILLAQTPICDCLGFGICRGIDMEKRLYHILTPVPPE 448
Query: 342 ILEKVDLFLQGFIQIPTCLLQVQGCMS---PYMSAN 374
L V+ L G I IP C+ + Q + PY++ +
Sbjct: 449 ELRNVNCLLVGAISIPHCVFKSQRGLEGTIPYITTD 484
>UNIPROTKB|I3LBV6 [details] [associations]
symbol:NOL9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051731 "polynucleotide 5'-hydroxyl-kinase activity"
evidence=IEA] [GO:0000460 "maturation of 5.8S rRNA" evidence=IEA]
GO:GO:0000460 InterPro:IPR010655 Pfam:PF06807 GO:GO:0051731
CTD:79707 GeneTree:ENSGT00390000012406 OMA:TISQGQP EMBL:FP236215
RefSeq:XP_003127589.2 Ensembl:ENSSSCT00000027328 GeneID:100518312
KEGG:ssc:100518312 Uniprot:I3LBV6
Length = 694
Score = 224 (83.9 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 53/172 (30%), Positives = 91/172 (52%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P+ +CG+++ GK+TF R+L+N LL + YL+ D+GQ EFT PG
Sbjct: 292 PVILVCGSQDVGKSTFIRYLMNQLLNSIPCIDYLECDLGQTEFTPPGCVSLLNITEPVLG 351
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
+TP++ ++G S K + Y++ I ++ Y++E PLIV
Sbjct: 352 PPFTHQRTPQKMVYYGKTSCKDNFENYIEIIKYVFSSYKRE--------------APLIV 397
Query: 158 NTPGWVKGIGYDILVDMLKYITPTHVVKINISFEKKNLP-AGAFWLDNFEGV 208
NT GWV G +LVD+++ ++P+HVV+ + S K +P ++D+ +G+
Sbjct: 398 NTMGWVADKGLLLLVDLIRLLSPSHVVQFSSS-RSKYMPNLTPDYVDDMDGL 448
Score = 191 (72.3 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 54/178 (30%), Positives = 88/178 (49%)
Query: 214 EISSARQDSFNRSVLVQKDA--RLLRDLRIMAYFRQCFPSDLNITIIKELAQALAAYPPY 271
++ S + + +R +++ ++LRDL ++ Y Q P + K L L PY
Sbjct: 487 KLMSVKSEFVSRKTERNRESHNKILRDLAVLGYLGQLQPP-----VPKPLCP-LHGLTPY 540
Query: 272 QVPISSIKIRHLYCQVPRSEIFYSLNATIVGLAISSDASENLPH------------CVGL 319
QVP +++ +R + V + I Y++NA+ VGL D H C+G
Sbjct: 541 QVPFNAVALRVTHADVAPTHILYAVNASWVGLCKILDDVRGYAHGPILLAQTPICDCLGF 600
Query: 320 GIVRGIDTLKGLLYVITPVPPGILEKVDLFLQGFIQIPTCLLQVQGCMS---PYMSAN 374
GI RG+D K L +++TPVPP L V+ L G I IP C+L+ Q + PY++ +
Sbjct: 601 GICRGVDMEKRLYHILTPVPPEQLRLVNCLLVGAISIPQCVLKSQRGLEGTIPYVTTD 658
>MGI|MGI:1921285 [details] [associations]
symbol:Nol9 "nucleolar protein 9" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=ISO] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0051731 "polynucleotide 5'-hydroxyl-kinase
activity" evidence=ISO] MGI:MGI:1921285 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:CH466594 GO:GO:0000460 InterPro:IPR010655
Pfam:PF06807 eggNOG:COG1341 GO:GO:0051731 EMBL:AL611927 CTD:79707
GeneTree:ENSGT00390000012406 OMA:TISQGQP HOVERGEN:HBG058105
EMBL:AK014568 EMBL:AK042581 EMBL:AK046761 EMBL:AK050948
EMBL:AK157398 EMBL:BC024877 EMBL:BC125432 EMBL:BC132099
IPI:IPI00625464 IPI:IPI00649815 IPI:IPI00874324
RefSeq:NP_001153071.1 RefSeq:NP_083003.2 UniGene:Mm.275803
ProteinModelPortal:Q3TZX8 SMR:Q3TZX8 STRING:Q3TZX8
PhosphoSite:Q3TZX8 PaxDb:Q3TZX8 PRIDE:Q3TZX8
Ensembl:ENSMUST00000084116 Ensembl:ENSMUST00000103197
Ensembl:ENSMUST00000105663 GeneID:74035 KEGG:mmu:74035
UCSC:uc008vzc.2 UCSC:uc008vzd.2 UCSC:uc008vzf.2 InParanoid:Q3TZX8
NextBio:339594 Bgee:Q3TZX8 Genevestigator:Q3TZX8 Uniprot:Q3TZX8
Length = 714
Score = 207 (77.9 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 49/149 (32%), Positives = 77/149 (51%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P+ +CGA + GK+TF+R L+N LL V YL+ D+GQ EFT PG
Sbjct: 316 PVILLCGACDIGKSTFNRILINQLLNSIPGVDYLECDLGQTEFTPPGCVALLTITEPLLG 375
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
+ P+R ++G ++ D Y YI + Y ++Y + E PLI+
Sbjct: 376 PPYTHQRKPQRMVYYGKMNCYND---YENYID-IVKYVFRDY----------KREFPLII 421
Query: 158 NTPGWVKGIGYDILVDMLKYITPTHVVKI 186
NT GWV G +LVD+++ ++P +VV++
Sbjct: 422 NTMGWVSDNGLRLLVDLIRVLSPNYVVQL 450
Score = 192 (72.6 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 52/143 (36%), Positives = 76/143 (53%)
Query: 234 RLLRDLRIMAYFRQCFPSDLNITIIKELAQALAAYPPYQVPISSIKIRHLYCQVPRSEIF 293
R+ RDL ++ Y Q L + + + L+ L + PYQVP S++ IR L+ V + I
Sbjct: 534 RIFRDLAVLGYLSQ-----LMLPVPESLSP-LHSLTPYQVPFSAVAIRVLHADVAPTHIL 587
Query: 294 YSLNATIVGLA-ISSD-----------ASENLPHCVGLGIVRGIDTLKGLLYVITPVPPG 341
Y++NA+ VGL I D A + C+G GI RGID K +++TP+PP
Sbjct: 588 YAVNASWVGLCRIVDDMKGYTRGPILLAQNPICDCLGFGICRGIDMDKRTYHILTPLPPE 647
Query: 342 ILEKVDLFLQGFIQIPTCLLQVQ 364
L+ V+ L G I IP C+ Q Q
Sbjct: 648 ELKTVNCLLVGSISIPHCIFQNQ 670
>UNIPROTKB|G3V7B0 [details] [associations]
symbol:Nol9 "Protein Nol9" species:10116 "Rattus
norvegicus" [GO:0000460 "maturation of 5.8S rRNA" evidence=IEA]
[GO:0051731 "polynucleotide 5'-hydroxyl-kinase activity"
evidence=IEA] RGD:1566167 InterPro:IPR010655 Pfam:PF06807
EMBL:CH473968 CTD:79707 GeneTree:ENSGT00390000012406 OMA:TISQGQP
RefSeq:XP_001076353.1 RefSeq:XP_233702.4 UniGene:Rn.162134
Ensembl:ENSRNOT00000013535 GeneID:313744 KEGG:rno:313744
NextBio:666739 Uniprot:G3V7B0
Length = 714
Score = 211 (79.3 bits), Expect = 3.3e-29, Sum P(2) = 3.3e-29
Identities = 49/171 (28%), Positives = 87/171 (50%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P+ +CGA + GK+TFSR L+N LL V YL+ D+GQ EFT PG
Sbjct: 316 PVILLCGACDIGKSTFSRILINHLLNSIPGVDYLECDLGQTEFTPPGCISLLNITEPLLG 375
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
+ P++ +FG + + Y++ + ++ Y++E+ PLI+
Sbjct: 376 PPYTHQRKPQKMVYFGKTNCHNEYENYIEIVKYVFRDYKREF--------------PLII 421
Query: 158 NTPGWVKGIGYDILVDMLKYITPTHVVKINISFEKKNLPAGAFWLDNFEGV 208
NT GWV G G +LVD+++ ++P +VV++ + P + +++ +G+
Sbjct: 422 NTMGWVSGDGLLLLVDLIRVLSPNYVVQLTSDRSEPMQPLTSEFVELTDGL 472
Score = 185 (70.2 bits), Expect = 3.3e-29, Sum P(2) = 3.3e-29
Identities = 50/143 (34%), Positives = 74/143 (51%)
Query: 234 RLLRDLRIMAYFRQCFPSDLNITIIKELAQALAAYPPYQVPISSIKIRHLYCQVPRSEIF 293
R+ RDL ++ Y Q L + + + L L + PYQVP +++ IR + V + I
Sbjct: 534 RIFRDLAVLGYLSQ-----LMLPVTEPLCP-LHSLTPYQVPFNAVAIRVTHADVAPTHIL 587
Query: 294 YSLNATIVGLA-ISSD-----------ASENLPHCVGLGIVRGIDTLKGLLYVITPVPPG 341
Y++NA+ VGL I D A + C+G GI RGID K L +++TP+PP
Sbjct: 588 YAMNASWVGLCKIVDDMKGYTRGPILLAQNPICDCLGFGICRGIDMDKRLYHILTPLPPE 647
Query: 342 ILEKVDLFLQGFIQIPTCLLQVQ 364
L V+ L G I IP C+ + Q
Sbjct: 648 ELRTVNCLLVGTISIPHCIFKNQ 670
>DICTYBASE|DDB_G0277945 [details] [associations]
symbol:nol9 "NUC156 family protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0051731
"polynucleotide 5'-hydroxyl-kinase activity" evidence=ISS]
[GO:0006364 "rRNA processing" evidence=IEA;ISS] [GO:0000460
"maturation of 5.8S rRNA" evidence=ISS] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] dictyBase:DDB_G0277945 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0000460
InterPro:IPR010655 Pfam:PF06807 eggNOG:COG1341 GO:GO:0051731
RefSeq:XP_642025.1 ProteinModelPortal:Q54Z27 PRIDE:Q54Z27
EnsemblProtists:DDB0237577 GeneID:8621236 KEGG:ddi:DDB_G0277945
InParanoid:Q54Z27 OMA:LIRSIDM Uniprot:Q54Z27
Length = 683
Score = 242 (90.2 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 53/173 (30%), Positives = 89/173 (51%)
Query: 17 IPREWSDAADS-IAYDSNTSPPPIAFI-CGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTD 74
IP EW + ++ Y+ + + ++ + CG +N GK+TF+R L+N LL++Y + +++TD
Sbjct: 248 IPNEWLNLINTQFLYNDHCNNNGLSILTCGERNVGKSTFNRILINKLLKKYTHIIFIETD 307
Query: 75 VGQPEFTAPGFXXXXXXXXXXXXXXIP-CLKTPKRCYFFGDVSSKRDPTAYLKYITTLYD 133
GQ EFT G C P + YFFGD S K +P +L L D
Sbjct: 308 TGQTEFTPSGIMSIDIINSPLLGPPFTHCKNNPLKSYFFGDTSPKNNPEYFLNLSFQLID 367
Query: 134 YYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKYITPTHVVKI 186
+ + P +P+I+NT GW+K +G + +++KY PT +V++
Sbjct: 368 CCN-----LIKQQYPN---IPIILNTNGWLKSLGLHLTQEIIKYFKPTSIVQL 412
Score = 130 (50.8 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 313 LPHCVGLGIVRGIDTLKGLLYVITPVPPGILEKVDLFLQGFIQIP-TCLLQVQG---CMS 368
+ C+GLG++R ID + G Y+ITP+ P +LE + L+G I+IP T + V +
Sbjct: 598 ISQCIGLGLIRSIDMVNGYYYIITPIDPSLLEISNTILKGSIEIPQTLTISVSSKGKILV 657
Query: 369 PYMSANVL 376
PY+ +VL
Sbjct: 658 PYLQLDVL 665
Score = 105 (42.0 bits), Expect = 6.7e-25, Sum P(2) = 6.7e-25
Identities = 26/96 (27%), Positives = 51/96 (53%)
Query: 264 ALAAYPPYQVPISSIKIRHLYCQVPRSEIFYSLNATIVGLAISSDASENLPHCVGLGIVR 323
+L+ PYQV +K++ L VP S+ Y+LNA++VG+ I D +N + + +
Sbjct: 528 SLSHQSPYQVSWKELKVKILTNNVPPSQTMYALNASLVGICIDEDPEKNYKY-ISYKVGN 586
Query: 324 GIDTLKGLLYVITP-VPPGILEKVDLFLQGFIQIPT 358
+ T+ +I+ + G++ +D+ + G+ I T
Sbjct: 587 NLPTIINQSPLISQCIGLGLIRSIDM-VNGYYYIIT 621
>POMBASE|SPCC830.03 [details] [associations]
symbol:grc3 "polynucleotide kinase Grc3 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000448 "cleavage in
ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0006363 "termination of
RNA polymerase I transcription" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISO;ISS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IMP] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IDA] [GO:0051731 "polynucleotide 5'-hydroxyl-kinase
activity" evidence=ISO;ISS] [GO:0097356 "perinucleolar compartment"
evidence=IDA] PomBase:SPCC830.03 GO:GO:0005524 GO:GO:0005730
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0030702
GO:GO:0031618 GO:GO:0000448 GO:GO:0006363 GO:GO:0031508
InterPro:IPR010655 Pfam:PF06807 eggNOG:COG1341 KO:K06947
GO:GO:0051731 OrthoDB:EOG4NW2TR OMA:IAFRENE EMBL:AB027930
PIR:T41629 RefSeq:NP_588473.1 EnsemblFungi:SPCC830.03.1
GeneID:2539329 KEGG:spo:SPCC830.03 NextBio:20800494 GO:GO:0097356
Uniprot:Q9UU96
Length = 736
Score = 255 (94.8 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 81/308 (26%), Positives = 141/308 (45%)
Query: 18 PREWSDAADSIAYDSNTSP--PPIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDV 75
P W ++ + + ++ S P +CG K GK++FSR++ N LLQ+Y+ +AYLD D
Sbjct: 310 PESWCSFSNQLLFSTSKSDYVVPRLMVCGPKGSGKSSFSRYITNRLLQQYRHIAYLDLDP 369
Query: 76 GQPEFTAPGFXXXXXXXXXXXXXXIPCLKTPKRCY--FFGDVSSKRDPTAYLKYITTLYD 133
GQPE G + P GD+S ++DP Y+ +T L+
Sbjct: 370 GQPEVVPSGHISLYYINSPLQGPVFARMLFPTYMLRLHLGDISPQKDPDHYIACVTRLFA 429
Query: 134 YYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKYITPTHVVKINISF--- 190
Y+ Y+FN+ S + +PLI+N PGW++G G ++L ++ PT VV ++
Sbjct: 430 EYKD--YIFNQEISQ-KEIIPLIINCPGWIRGGGAELLSSIVDICQPTEVVYMSREDMKS 486
Query: 191 ---EKKNLPAGAFWLDNF----EGVDVNLIEISSARQDSFNRSVLVQKDARLLRDLRIMA 243
EKK++ ++ +F + + L+E + N + + D R+L L +
Sbjct: 487 SHREKKSIYQHKEYMPDFLSSRDEFQLTLLESTWQYLPDPNVNKVTSADNRMLGLLSYL- 545
Query: 244 YFRQCFPSDLNITIIKELAQALA-AYPPYQVPISSIKIRHLYCQVPRSEIFYSLNATIVG 302
YF C + T Q +A A+ I ++ I V +++ ++N T++
Sbjct: 546 YFN-CNLQRWDFTTSLTACQPIATAFKGSSKGIDAVNIIGEPLNV--NDVAKTINGTLMA 602
Query: 303 LAISSDAS 310
L AS
Sbjct: 603 LYACDTAS 610
Score = 51 (23.0 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 312 NLPHCVGLGIVRGIDTLKGLLYVITPV 338
N HC+GL ++R ID + + + P+
Sbjct: 639 NTSHCLGLIVLRTIDLKRNEFHFVGPL 665
>RGD|1566167 [details] [associations]
symbol:Nol9 "nucleolar protein 9" species:10116 "Rattus
norvegicus" [GO:0000460 "maturation of 5.8S rRNA" evidence=ISO]
[GO:0051731 "polynucleotide 5'-hydroxyl-kinase activity"
evidence=ISO] RGD:1566167 GO:GO:0000460 InterPro:IPR010655
Pfam:PF06807 eggNOG:COG1341 GO:GO:0051731 HOGENOM:HOG000113821
OrthoDB:EOG45HRWZ UniGene:Rn.162134 EMBL:BC098821 IPI:IPI00359780
STRING:Q4G021 InParanoid:Q4G021 Genevestigator:Q4G021
Uniprot:Q4G021
Length = 303
Score = 185 (70.2 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 50/143 (34%), Positives = 74/143 (51%)
Query: 234 RLLRDLRIMAYFRQCFPSDLNITIIKELAQALAAYPPYQVPISSIKIRHLYCQVPRSEIF 293
R+ RDL ++ Y Q L + + + L L + PYQVP +++ IR + V + I
Sbjct: 123 RIFRDLAVLGYLSQ-----LMLPVTEPLCP-LHSLTPYQVPFNAVAIRVTHADVAPTHIL 176
Query: 294 YSLNATIVGLA-ISSD-----------ASENLPHCVGLGIVRGIDTLKGLLYVITPVPPG 341
Y++NA+ VGL I D A + C+G GI RGID K L +++TP+PP
Sbjct: 177 YAMNASWVGLCKIVDDMKGYTRGPILLAQNPICDCLGFGICRGIDMDKRLYHILTPLPPE 236
Query: 342 ILEKVDLFLQGFIQIPTCLLQVQ 364
L V+ L G I IP C+ + Q
Sbjct: 237 ELRTVNCLLVGTISIPHCIFKNQ 259
Score = 103 (41.3 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 19/59 (32%), Positives = 37/59 (62%)
Query: 150 RTELPLIVNTPGWVKGIGYDILVDMLKYITPTHVVKINISFEKKNLPAGAFWLDNFEGV 208
+ E PLI+NT GWV G G +LVD+++ ++P +VV++ + P + +++ +G+
Sbjct: 3 KREFPLIINTMGWVSGDGLLLLVDLIRVLSPNYVVQLTSDRSEPMQPLTSEFVELTDGL 61
>UNIPROTKB|Q4IR18 [details] [associations]
symbol:GRC3 "Polynucleotide 5'-hydroxyl-kinase GRC3"
species:229533 "Gibberella zeae PH-1" [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0051731 "polynucleotide 5'-hydroxyl-kinase
activity" evidence=ISS] GO:GO:0005524 GO:GO:0005730 GO:GO:0006364
eggNOG:COG1341 GO:GO:0051731 ProteinModelPortal:Q4IR18 PRIDE:Q4IR18
EnsemblFungi:FGSG_00340T0 Uniprot:Q4IR18
Length = 720
Score = 215 (80.7 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 60/179 (33%), Positives = 79/179 (44%)
Query: 18 PREWSDAADSIAYDSNTSPPPIAFICGAKNCGKTTFSRHLVNVLL------QRYKKVAYL 71
P EW+ S+ S P ICG K+ GK+TFSR +N LL Q + V L
Sbjct: 259 PPEWNKKLSSLVATSRKKPSLSTLICGPKSAGKSTFSRLFLNGLLTDRSQKQGARSVVIL 318
Query: 72 DTDVGQPEFTAPGFXXXXXXXXXXXXXXI--PCLK----TPKRCYFFGDVSSKRDPTAYL 125
D D GQPE+ PG P LK T R + + +P YL
Sbjct: 319 DLDPGQPEYAPPGTLSLVFVTKPNLGTPFTHPSLKNSAFTVVRSHSMASATPAPNPDLYL 378
Query: 126 KYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKYITPTHVV 184
T L+D Y K Y + PLIVNTPGW++G G D+L +++ I P V+
Sbjct: 379 ACATDLFDTYSKHY-----------SGAPLIVNTPGWIQGTGLDLLSSLIEKIKPQEVL 426
Score = 63 (27.2 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 317 VGLGIVRGIDTLKGLLYVITPVP 339
+GL ++RGIDT L ++TP+P
Sbjct: 592 IGLVLLRGIDTKSETLQLVTPIP 614
>UNIPROTKB|P0CM78 [details] [associations]
symbol:GRC3 "Polynucleotide 5'-hydroxyl-kinase GRC3"
species:214684 "Cryptococcus neoformans var. neoformans JEC21"
[GO:0006364 "rRNA processing" evidence=ISS] [GO:0051731
"polynucleotide 5'-hydroxyl-kinase activity" evidence=ISS]
GO:GO:0005524 GO:GO:0005730 GO:GO:0006364 GO:GO:0051731
EMBL:AE017344 RefSeq:XP_570592.1 UniGene:Fne.7249
ProteinModelPortal:P0CM78 GeneID:3256885 KEGG:cne:CND04240
Uniprot:P0CM78
Length = 744
Score = 214 (80.4 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 59/194 (30%), Positives = 93/194 (47%)
Query: 18 PREWSDAADSIAY-DSNTSPPPIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVG 76
P WS A S++ D N P + + G K GK+TF+R L+N LL+R++KVA+L+ D+G
Sbjct: 304 PPSWSHAISSLSSSDVNLQTPFVGLVKGPKRSGKSTFARALLNNLLRRFRKVAWLECDLG 363
Query: 77 QPEFTAPGFXXXXXXXXXXXXXXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYR 136
Q EF + P R ++ G + P YL I L ++Y+
Sbjct: 364 QGEFGSGAVVGLWILDKPALGPPFTHPLLPSRSHYLGTYTPLTCPDEYLVAIRHLIEHYK 423
Query: 137 KEYYMFNESESPGRT-------ELPLIVNTPGWVKGIGYDILVDMLKYITPTHVVKINIS 189
E +E + T +PL++NT GW+KG+G ++L + PT V S
Sbjct: 424 YELQYTSEYSALHTTVHDKISTHVPLVINTQGWMKGLGEELLNVIESMAQPTRV----FS 479
Query: 190 FEKKN--LPAGAFW 201
FE ++ + +G W
Sbjct: 480 FESQSEEVYSGQGW 493
Score = 59 (25.8 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 14/52 (26%), Positives = 31/52 (59%)
Query: 312 NLPHCVGLGIVRGIDTLK----GL-LYVITPVPPGILEKVDLFLQ-GFIQIP 357
+L + +GL ++R + + GL L ++TP+PP L + + ++ G +++P
Sbjct: 641 DLVNILGLAVIRSLSSGNSVNPGLKLQLLTPLPPSYLSRARILIKSGALELP 692
>UNIPROTKB|P0CM79 [details] [associations]
symbol:GRC3 "Polynucleotide 5'-hydroxyl-kinase GRC3"
species:283643 "Cryptococcus neoformans var. neoformans B-3501A"
[GO:0006364 "rRNA processing" evidence=ISS] [GO:0051731
"polynucleotide 5'-hydroxyl-kinase activity" evidence=ISS]
GO:GO:0005524 GO:GO:0005730 GO:GO:0006364 GO:GO:0051731
EMBL:AAEY01000019 RefSeq:XP_776161.1 ProteinModelPortal:P0CM79
GeneID:4935597 KEGG:cnb:CNBD2080 Uniprot:P0CM79
Length = 744
Score = 214 (80.4 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 59/194 (30%), Positives = 93/194 (47%)
Query: 18 PREWSDAADSIAY-DSNTSPPPIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVG 76
P WS A S++ D N P + + G K GK+TF+R L+N LL+R++KVA+L+ D+G
Sbjct: 304 PPSWSHAISSLSSSDVNLQTPFVGLVKGPKRSGKSTFARALLNNLLRRFRKVAWLECDLG 363
Query: 77 QPEFTAPGFXXXXXXXXXXXXXXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYR 136
Q EF + P R ++ G + P YL I L ++Y+
Sbjct: 364 QGEFGSGAVVGLWILDKPALGPPFTHPLLPSRSHYLGTYTPLTCPDEYLVAIRHLIEHYK 423
Query: 137 KEYYMFNESESPGRT-------ELPLIVNTPGWVKGIGYDILVDMLKYITPTHVVKINIS 189
E +E + T +PL++NT GW+KG+G ++L + PT V S
Sbjct: 424 YELQYTSEYSALHTTVHDKISTHVPLVINTQGWMKGLGEELLNVIESMAQPTRV----FS 479
Query: 190 FEKKN--LPAGAFW 201
FE ++ + +G W
Sbjct: 480 FESQSEEVYSGQGW 493
Score = 59 (25.8 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 14/52 (26%), Positives = 31/52 (59%)
Query: 312 NLPHCVGLGIVRGIDTLK----GL-LYVITPVPPGILEKVDLFLQ-GFIQIP 357
+L + +GL ++R + + GL L ++TP+PP L + + ++ G +++P
Sbjct: 641 DLVNILGLAVIRSLSSGNSVNPGLKLQLLTPLPPSYLSRARILIKSGALELP 692
>UNIPROTKB|Q0CKU1 [details] [associations]
symbol:grc3 "Polynucleotide 5'-hydroxyl-kinase grc3"
species:341663 "Aspergillus terreus NIH2624" [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0051731 "polynucleotide
5'-hydroxyl-kinase activity" evidence=ISS] GO:GO:0005524
GO:GO:0005730 GO:GO:0006364 EMBL:CH476601 eggNOG:COG1341
GO:GO:0051731 HOGENOM:HOG000048349 OrthoDB:EOG4NW2TR
RefSeq:XP_001214871.1 ProteinModelPortal:Q0CKU1
EnsemblFungi:CADATEAT00002941 GeneID:4321818 Uniprot:Q0CKU1
Length = 815
Score = 199 (75.1 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
Identities = 84/334 (25%), Positives = 145/334 (43%)
Query: 15 IYIPREWSDAADSIAYDSNTSPPPIAFICGAKNCGKTTFSRHLVNVLLQRYKK------- 67
+++ ++WS A S++ A ICG K GK+TFSR+L+N LL +
Sbjct: 300 LHLEKQWSSAIKSLSQKGGKLR---ALICGPKGSGKSTFSRYLLNHLLSPAPQTEPSYCN 356
Query: 68 ---VAYLDTDVGQPEFTAPG--FXXXXXXXXXXXXXXIPCLK-----TPKRCYFFGDVSS 117
VA+LD D GQPEF G + P L+ T R + G S
Sbjct: 357 TDGVAFLDLDPGQPEFAPMGQIYLAHLRSPVFGPPFSHPSLEGSQDGTVIRAHHIGASSP 416
Query: 118 KRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKY 177
K DP Y+ T L D YR + P + PLI+N PGW+ G+G ++ +++
Sbjct: 417 KDDPDHYVLAATDLMDRYRALLASY-----P---QCPLIINYPGWIFGLGLEVATWLVRS 468
Query: 178 ITPTHVVKINISFEKKNL-PAGAFWLDNFEGVDVNLIEISSARQDSFNRSVLVQKDARLL 236
+ + V+ ++ + + P G + L + S D +RS + L
Sbjct: 469 LGLSDVIYMSEKGPAEVVEPLG----QAAAAARIPLTTLPSQPTDFVSRS------SAQL 518
Query: 237 RDLRIMAYFRQCFPSDLNITIIKELAQALAAYPPYQV----PISSIK-IRHLYCQVPRSE 291
R +++ +YF P+D++ + L Q ++ P++V P I+ I + Q+
Sbjct: 519 RSMQMQSYFHMTRPADVSTPLW--LDQPMSRTRPFKVHYAGPHQGIRGIMVMGSQIHPDL 576
Query: 292 IFYSLNATIVGLAISSDASENLPHCVGLGIVRGI 325
+ +L+ ++VG+ + L H G+ G+
Sbjct: 577 LHEALDGSLVGVVAVESPNAILGHSEVPGLANGV 610
Score = 63 (27.2 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 301 VGLAISSDASENLPHCVGLGIVRGIDTLKGLLYVITPVPPGILEKVDLFLQGF 353
VG + HC+GL +VR ++ L ++TP+ + D QG+
Sbjct: 659 VGAGSCNPLDPKASHCLGLALVRSVNVAARQLELVTPIAASRIR--DALQQGY 709
>UNIPROTKB|Q4WID9 [details] [associations]
symbol:grc3 "Polynucleotide 5'-hydroxyl-kinase grc3"
species:330879 "Aspergillus fumigatus Af293" [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0051731 "polynucleotide
5'-hydroxyl-kinase activity" evidence=ISS] GO:GO:0005524
GO:GO:0005730 GO:GO:0006364 eggNOG:COG1341 GO:GO:0051731
HOGENOM:HOG000048349 OrthoDB:EOG4NW2TR EMBL:AAHF01000008
RefSeq:XP_001481647.1 ProteinModelPortal:Q4WID9 GeneID:5076960
GenomeReviews:CM000170_GR KEGG:afm:AFUA_2G02190 Uniprot:Q4WID9
Length = 841
Score = 181 (68.8 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 79/315 (25%), Positives = 137/315 (43%)
Query: 15 IYIPREWSDAADSIAYDSNTSPPPIAFICGAKNCGKTTFSRHLVNVLLQ-------RYKK 67
+++ ++WS A S++ ICG K GK+TFSR+L+N LL ++
Sbjct: 312 LHLEKQWSSAIRSLSQRGGRLK---VLICGPKASGKSTFSRYLLNHLLSPAPQTENNHRN 368
Query: 68 ---VAYLDTDVGQPEFTAPG--FXXXXXXXXXXXXXXIPCLKTPK-----RCYFFGDVSS 117
VA+LD D GQPEF G + P L + R + G +S
Sbjct: 369 TDGVAFLDLDPGQPEFCPMGQVYLAHLRSPFFGPPFTHPSLAESQDGSIIRSHHIGAISP 428
Query: 118 KRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKY 177
K DP Y+ L D YR + P + PLI+N PGW+ G+G ++ ++K
Sbjct: 429 KEDPDHYVLAAMDLMDRYRALLASY-----P---QCPLIINYPGWIFGLGLEVATWLVKS 480
Query: 178 ITPTHVVKINISFEKKNL-PAGAFWLDNFEGVDVNLIEISSARQDSFNRSVLVQKDARLL 236
+ + VV ++ + + P G + V L + S D +RS + L
Sbjct: 481 LGLSDVVYMSEKGPAEVVEPLG----HAAQEARVPLTTLPSQPTDFVSRS------SAQL 530
Query: 237 RDLRIMAYFRQCFPSDLNIT--IIKELAQALAAYPPYQVPISSIK-IRHLYCQVPRSEIF 293
R +++ +YF PS+++ + +++ Y P I+ I + Q+ + +
Sbjct: 531 RSMQVQSYFHMSHPSEIHNPQWLDTTMSRTRPLVVDYAGPRQGIRGIMVMGSQISPNLLH 590
Query: 294 YSLNATIVGL-AISS 307
+L+ +VG+ A+ S
Sbjct: 591 EALDGALVGVVAVES 605
Score = 77 (32.2 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 23/79 (29%), Positives = 33/79 (41%)
Query: 274 PISSIKIRHLYCQVPRSEIFYSLNATIVGLAISSDASENLPHCVGLGIVRGIDTLKGLLY 333
P SS + + P ++ Y VG + +C+GL +VR ID L
Sbjct: 655 PTSSSSFESMIIRTPNEDLPY----LFVGSGSCNPLDPKASNCLGLALVRSIDVPSRKLE 710
Query: 334 VITPVPPGILEKVDLFLQG 352
+ITP+P L D QG
Sbjct: 711 LITPIPASKLR--DALEQG 727
>UNIPROTKB|A1CYR9 [details] [associations]
symbol:grc3 "Polynucleotide 5'-hydroxyl-kinase grc3"
species:331117 "Neosartorya fischeri NRRL 181" [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0051731 "polynucleotide
5'-hydroxyl-kinase activity" evidence=ISS] GO:GO:0005524
GO:GO:0005730 GO:GO:0006364 eggNOG:COG1341 GO:GO:0051731
HOGENOM:HOG000048349 OrthoDB:EOG4NW2TR EMBL:DS027686
RefSeq:XP_001265786.1 ProteinModelPortal:A1CYR9
EnsemblFungi:CADNFIAT00003295 GeneID:4592867 KEGG:nfi:NFIA_034570
Uniprot:A1CYR9
Length = 835
Score = 179 (68.1 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 79/315 (25%), Positives = 137/315 (43%)
Query: 15 IYIPREWSDAADSIAYDSNTSPPPIAFICGAKNCGKTTFSRHLVNVLLQ-------RYKK 67
+++ ++WS A S++ ICG K GK+TFSR+L+N LL ++
Sbjct: 306 LHLEKQWSSAIRSLSQRGGRLK---VLICGPKASGKSTFSRYLLNHLLSPAPQTENNHRN 362
Query: 68 ---VAYLDTDVGQPEFTAPG--FXXXXXXXXXXXXXXIPCLKTPK-----RCYFFGDVSS 117
VA+LD D GQPEF+ G + P L + R + G S
Sbjct: 363 TDGVAFLDLDPGQPEFSPMGQVYLAHLRSPFFGPPFTHPSLAESQDGSIIRSHHIGVTSP 422
Query: 118 KRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKY 177
K DP Y+ L D YR + P + PLI+N PGW+ G+G ++ ++K
Sbjct: 423 KEDPDHYVLAAMDLMDRYRALLASY-----P---QCPLIINYPGWIFGLGLEVATWLVKS 474
Query: 178 ITPTHVVKINISFEKKNL-PAGAFWLDNFEGVDVNLIEISSARQDSFNRSVLVQKDARLL 236
+ + VV ++ + + P G + V L + S D +RS + L
Sbjct: 475 LGLSDVVYMSEKGPAEVVEPLG----HAAQEARVPLTTLPSQPTDFVSRS------SAQL 524
Query: 237 RDLRIMAYFRQCFPSDLNIT--IIKELAQALAAYPPYQVPISSIK-IRHLYCQVPRSEIF 293
R +++ +YF PS+++ + ++++ Y P I+ I + Q+ +
Sbjct: 525 RSMQVQSYFHMSHPSEIHNPQWLDTTMSRSRPLVVDYAGPRQGIRGIMVMGSQISPDLLH 584
Query: 294 YSLNATIVGL-AISS 307
+L+ +VG+ A+ S
Sbjct: 585 EALDGALVGVVAVES 599
Score = 79 (32.9 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 23/79 (29%), Positives = 34/79 (43%)
Query: 274 PISSIKIRHLYCQVPRSEIFYSLNATIVGLAISSDASENLPHCVGLGIVRGIDTLKGLLY 333
P SS + + + P ++ Y VG + +C+GL +VR ID L
Sbjct: 649 PTSSSSVESMITRTPNEDLPY----LFVGSGSCNPLDPKASNCLGLALVRSIDVPSRKLE 704
Query: 334 VITPVPPGILEKVDLFLQG 352
+ITP+P L D QG
Sbjct: 705 LITPIPGSKLR--DALEQG 721
>UNIPROTKB|A2QNQ8 [details] [associations]
symbol:grc3 "Polynucleotide 5'-hydroxyl-kinase grc3"
species:425011 "Aspergillus niger CBS 513.88" [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0051731 "polynucleotide
5'-hydroxyl-kinase activity" evidence=ISS] GO:GO:0005524
GO:GO:0005730 GO:GO:0006364 eggNOG:COG1341 GO:GO:0051731
OrthoDB:EOG4NW2TR EMBL:AM270135 ProteinModelPortal:A2QNQ8
GenomeReviews:AM270986_GR Uniprot:A2QNQ8
Length = 819
Score = 182 (69.1 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 75/280 (26%), Positives = 122/280 (43%)
Query: 15 IYIPREWSDAADSIAYDSNTSPPPIAFICGAKNCGKTTFSRHLVNVLLQ-------RYKK 67
+++ ++WS A S++ ICG K GK+TFSR+L+N LL +Y
Sbjct: 307 LHLEKQWSSAIKSLSQRGGRLK---TLICGPKGSGKSTFSRYLLNHLLSPAPQTETKYFN 363
Query: 68 ---VAYLDTDVGQPEFTAPG--FXXXXXXXXXXXXXXIPCLK-----TPKRCYFFGDVSS 117
VA+LD D GQPEF G + P L T R + G S
Sbjct: 364 TDGVAFLDLDPGQPEFAPMGQVYLAHLRSPVFGPPFSHPSLDGSRNGTIVRSHHIGATSP 423
Query: 118 KRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKY 177
K DP Y+ L D YR ++ P + PLI+N PGW+ G+G ++ +++
Sbjct: 424 KEDPDHYVLAAMDLMDRYRAL-----QASYP---QCPLIINYPGWIFGLGLEVATWLVRS 475
Query: 178 ITPTHVVKINISFEKKNL-PAGAFWLDNFEGVDVNLIEISSARQDSFNRSVLVQKDARLL 236
+ + VV ++ + + P G + L + S D +RS + L
Sbjct: 476 LGLSDVVYMSEKGPTEVVQPLGQAAYQ----AKIPLTILPSQPTDFVSRS------SAQL 525
Query: 237 RDLRIMAYFRQCFPSDLNITIIKELAQALAAYPPYQVPIS 276
R +++ +YF P+ +N ++ E Q L+ P++V S
Sbjct: 526 RSMQMQSYFHMSRPNGINNSLWLE--QPLSRTKPFRVHYS 563
Score = 72 (30.4 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 273 VP-ISSIKIRHLYCQVPRSEIFYSLNATIVGLAISSDASENLPHCVGLGIVRGIDTLKGL 331
VP I + I + P ++ Y VG S+ + HC+GL +VR ++
Sbjct: 636 VPVIGTSTIESSITRTPNEDLPY----LFVGAGSSNPLDPKVSHCLGLALVRSVNVASRQ 691
Query: 332 LYVITPVPPGILEKV 346
L ++TP+ L V
Sbjct: 692 LELVTPITGSTLRGV 706
>UNIPROTKB|A8WQV9 [details] [associations]
symbol:nol-9 "Polynucleotide 5'-hydroxyl-kinase nol-9"
species:6238 "Caenorhabditis briggsae" [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0051731 "polynucleotide
5'-hydroxyl-kinase activity" evidence=ISS] GO:GO:0005524
GO:GO:0005730 GO:GO:0006364 InterPro:IPR010655 Pfam:PF06807
EMBL:HE601298 eggNOG:COG1341 GO:GO:0051731 EnsemblMetazoa:CBG01769
WormBase:CBG01769 HOGENOM:HOG000016406 Uniprot:A8WQV9
Length = 548
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 101/378 (26%), Positives = 158/378 (41%)
Query: 6 PQTENPSPAIYIPREWSDAADSIAYDSNTSPPPIAFICGAKNCGKTTFSRHLVNVLLQR- 64
PQ + ++ R S AD + TS PI G K GK+ R+LVN L
Sbjct: 156 PQDDEARLNTHLNRLNSLKADGV----KTSILPI----GHKGAGKSNLMRNLVNRCLSNG 207
Query: 65 YKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXXXXIPCLK-TPKRCYFFGDVSSKRDPTA 123
Y+ V LD D+GQ EFT G K T YF+GD++ +
Sbjct: 208 YEHVYVLDCDIGQSEFTPNGCISLTKVTSPLLDKPYGHQKKTFDNSYFYGDITVNDNNID 267
Query: 124 YLKYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKYITPTHV 183
+ Y+ D + + + F PG IVN+ GW+ G +IL +++ I P
Sbjct: 268 H--YM----DIFERLFNKFKLISEPGSV---CIVNSMGWIVDEGAEILDGIIRVIEPDLC 318
Query: 184 VKINISFEKKNLPAGAFWLDNFEGVDVNLIEISSARQDSFNRSVLVQK-DARLLRDLRIM 242
V+I F + +F FE V +EI + +K A L R+L I
Sbjct: 319 VEI---FRDQTEARYSF--KEFEKCKV--VEIFANNSVGVIGLPNQKKLPAPLHRELTIT 371
Query: 243 AYFRQCFPSDLNITIIKELAQALAAYPPYQVPISSIKI-RHLYCQVPRSEIFYSLNATIV 301
YF P TI + A+ PPY++ +I I + V IF S+N ++
Sbjct: 372 GYFSSLLPRP---TIA-----SFASVPPYRLNFRNITICLPMDLLVEDCHIFSSINTQLI 423
Query: 302 GLAISS--------DASENLP------------HCVGLGIVRGIDTLKGLLYVITPVPPG 341
L + + + +++P C+G GI+RG++ + +YV+TPV
Sbjct: 424 ALCVKNPDLKTRKLNGKQDMPSLSVIDSTSPALQCIGFGIIRGVNVEERSVYVVTPVNLL 483
Query: 342 ILEKVDLFLQGF-IQIPT 358
L++ L ++G IQ P+
Sbjct: 484 KLQEPPLLVRGMRIQTPS 501
>UNIPROTKB|A1CFB5 [details] [associations]
symbol:grc3 "Polynucleotide 5'-hydroxyl-kinase grc3"
species:344612 "Aspergillus clavatus NRRL 1" [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0051731 "polynucleotide
5'-hydroxyl-kinase activity" evidence=ISS] GO:GO:0005524
GO:GO:0005730 GO:GO:0006364 eggNOG:COG1341 GO:GO:0051731
EMBL:DS027052 RefSeq:XP_001272990.1 ProteinModelPortal:A1CFB5
EnsemblFungi:CADACLAT00008591 GeneID:4705247 KEGG:act:ACLA_092620
HOGENOM:HOG000048349 OrthoDB:EOG4NW2TR Uniprot:A1CFB5
Length = 839
Score = 173 (66.0 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 86/317 (27%), Positives = 137/317 (43%)
Query: 15 IYIPREWSDAADSIAYDSNTSPPPIAFICGAKNCGKTTFSRHLVNVLLQRYKK------- 67
+++ ++WS A S+ S + ICG K GK+TFSR+L+N LL +
Sbjct: 307 LHLEKQWSSAIKSL---SQRNGQLRVLICGPKASGKSTFSRYLLNHLLSPAPQTETDFRN 363
Query: 68 ---VAYLDTDVGQPEFTAPG--FXXXXXXXXXXXXXXIPCLKTPK-----RCYFFGDVSS 117
VA+LD D GQPEF+ G + P L + R + G S
Sbjct: 364 TDGVAFLDLDPGQPEFSPMGQVYLAHLGSPFFGPPFTHPSLDGGQDGSIIRAHHIGATSP 423
Query: 118 KRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKY 177
K DP Y+ L D YR + P + PLI+N PGW+ G+G ++ ++K
Sbjct: 424 KDDPDHYVLAAMDLMDRYRSLLASY-----P---QCPLIINYPGWIFGLGLEVATWLVKS 475
Query: 178 ITPTHVVKINISFEKKNLPAGAFW-LDN--FEGVDVNLIEISSARQDSFNRSVLVQKDAR 234
+ + VV ++ EK PA L +E + L + S D +RS +
Sbjct: 476 LGLSDVVYMS---EKG--PAEVVEPLSQAAYEA-RIPLTTLPSQPTDFVSRS------SA 523
Query: 235 LLRDLRIMAYFRQCFPSDLNITIIKE--LAQALAAYPPYQVPISSIK-IRHLYCQVPRSE 291
LR ++I +YF PS++ E ++++ Y P I+ I + Q+
Sbjct: 524 QLRSMQIQSYFHMSQPSEIQTPQWLETTISKSRPFVVDYAGPRQGIRGIMVMGSQISPDL 583
Query: 292 IFYSLNATIVGL-AISS 307
+ L+ IVG+ A+ S
Sbjct: 584 LHDVLDGAIVGVVAVES 600
Score = 65 (27.9 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 301 VGLAISSDASENLPHCVGLGIVRGIDTLKGLLYVITPVP 339
VG + +C+GL +VR ID L ++TP+P
Sbjct: 676 VGAGSCNPLDPKASNCLGLALVRSIDVPSRKLELVTPIP 714
>SGD|S000003958 [details] [associations]
symbol:GRC3 "Polynucleotide kinase present on rDNA"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0030874 "nucleolar chromatin" evidence=IPI] [GO:0016740
"transferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051731 "polynucleotide 5'-hydroxyl-kinase
activity" evidence=IDA] [GO:0006363 "termination of RNA polymerase
I transcription" evidence=IMP] [GO:0016310 "phosphorylation"
evidence=IEA] SGD:S000003958 GO:GO:0005524 EMBL:BK006945
GO:GO:0006364 GO:GO:0006363 GO:GO:0030874 InterPro:IPR010655
Pfam:PF06807 eggNOG:COG1341 HOGENOM:HOG000112809 KO:K06947
OrthoDB:EOG4ZPJ45 GO:GO:0051731 OMA:MIIGNKN EMBL:Z73140 EMBL:X81985
PIR:S64786 RefSeq:NP_013065.1 ProteinModelPortal:Q07845 SMR:Q07845
STRING:Q07845 EnsemblFungi:YLL035W GeneID:850624 KEGG:sce:YLL035W
CYGD:YLL035w NextBio:966529 Genevestigator:Q07845
GermOnline:YLL035W Uniprot:Q07845
Length = 632
Score = 181 (68.8 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 69/303 (22%), Positives = 125/303 (41%)
Query: 14 AIYIPREWSDAADSIAYD-SNTSPPPIAFICGAKNCGKTTFSRHLVNVLLQRYK------ 66
++ +P WS + + N + + G KN GK+TF R L+ Q +
Sbjct: 215 SLSVPGYWSTPLEKLYLSHKNAAYDTRIMVIGGKNSGKSTFLRLLLEKFTQDIRDSTTSQ 274
Query: 67 -KVAYLDTDVGQPEFTAP-GFXXXXXXXXXXXXXXIPCLKTPKRCY--FFGDVSSKRD-P 121
++ YLD D GQPE++ P C + + F+ SS +D P
Sbjct: 275 EELVYLDLDPGQPEYSLPDSISLNKILSSPISLGQHLCQGSNFQTLLQFYAGSSSPQDEP 334
Query: 122 TAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKYITPT 181
T+YL L D+ ++ + F S ++N PGW+KG G IL +++ PT
Sbjct: 335 TSYLNCADKLIDHLEEQAF-FGTS----------LLNLPGWIKGFGMQILNHIIRKYKPT 383
Query: 182 HVVKINISFEKKNLPAGAFWLDNFEGV-DVNLIEISSARQDSFNRSVLVQKDARLLRDLR 240
H++ + + K++L + D E+ S N ++ + A LR +
Sbjct: 384 HLLFLETANSKRHLDELTIPQSFSTSLRDAYAPEVVRVPAHSLNHTLSSRFHASQLRTFK 443
Query: 241 IMAYFRQCFPSDLNITIIKELAQALAAYPPYQVPISSIKIRHLYCQVPRSEIFYSLNATI 300
I+A F + D + + + A +Y + I I+ + + +I +L T+
Sbjct: 444 ILALFHKITQFDYDFAPLLKSAPLQISYGKGKSGIKGIQFPMEFQDLNPQDIKSALEGTV 503
Query: 301 VGL 303
+G+
Sbjct: 504 IGI 506
Score = 46 (21.3 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 295 SLNATIVGLAISSDASENLPHCVGLGIVRGIDTLKGLLYV-ITPVPPGILEK 345
SLN T L + +S+N + LG++ IDT + ++ + + P IL+K
Sbjct: 519 SLN-TFPILQSCTSSSKNF---ITLGLIHSIDTSQQIMNIYVPPCHTQILDK 566
>CGD|CAL0001772 [details] [associations]
symbol:orf19.721 species:5476 "Candida albicans" [GO:0030874
"nucleolar chromatin" evidence=IEA] [GO:0006363 "termination of RNA
polymerase I transcription" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0051731 "polynucleotide
5'-hydroxyl-kinase activity" evidence=IEA] CGD:CAL0001772
GO:GO:0005524 GO:GO:0005730 EMBL:AACQ01000135 EMBL:AACQ01000134
GO:GO:0006364 eggNOG:COG1341 GO:GO:0051731 RefSeq:XP_713081.1
RefSeq:XP_713104.1 ProteinModelPortal:Q59U11 GeneID:3645242
GeneID:3645279 KEGG:cal:CaO19.721 KEGG:cal:CaO19.8340
Uniprot:Q59U11
Length = 686
Score = 185 (70.2 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 49/174 (28%), Positives = 83/174 (47%)
Query: 21 WSDAADSIAYDSNTSPPPIAFICGAKNCGKTTFSRHLVNVLL--QRYKKVAYLDTDVGQP 78
W + + + + + P I I G KN GK+TF + L+N LL + V+YL+ D GQ
Sbjct: 242 WINELNLLKSNKDDPTPKIIMIIGNKNTGKSTFCKSLINELLLTNPNRPVSYLEIDPGQS 301
Query: 79 EFTAP-GFXXXXXXXXXXXXXXIPCLKT---PKRC-YFFGDVSSKRDPTAYLKYITTLYD 133
E++ P +P R ++FG S+ PT Y++ I L++
Sbjct: 302 EYSTPYALSLSEIVQAQFGLVALPHKNNNIVKSRVEHYFGFTSAVNAPTRYVEIIEELFN 361
Query: 134 YYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKYITPTHVVKIN 187
+++ ++ N LI+NTPGWVKG G ++L + K I P ++ ++
Sbjct: 362 HHQTKFSQRNH----------LIINTPGWVKGYGKELLNQITKIINPDKLILLS 405
>UNIPROTKB|Q59U11 [details] [associations]
symbol:GRC3 "Polynucleotide 5'-hydroxyl-kinase GRC3"
species:237561 "Candida albicans SC5314" [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0051731 "polynucleotide
5'-hydroxyl-kinase activity" evidence=ISS] CGD:CAL0001772
GO:GO:0005524 GO:GO:0005730 EMBL:AACQ01000135 EMBL:AACQ01000134
GO:GO:0006364 eggNOG:COG1341 GO:GO:0051731 RefSeq:XP_713081.1
RefSeq:XP_713104.1 ProteinModelPortal:Q59U11 GeneID:3645242
GeneID:3645279 KEGG:cal:CaO19.721 KEGG:cal:CaO19.8340
Uniprot:Q59U11
Length = 686
Score = 185 (70.2 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 49/174 (28%), Positives = 83/174 (47%)
Query: 21 WSDAADSIAYDSNTSPPPIAFICGAKNCGKTTFSRHLVNVLL--QRYKKVAYLDTDVGQP 78
W + + + + + P I I G KN GK+TF + L+N LL + V+YL+ D GQ
Sbjct: 242 WINELNLLKSNKDDPTPKIIMIIGNKNTGKSTFCKSLINELLLTNPNRPVSYLEIDPGQS 301
Query: 79 EFTAP-GFXXXXXXXXXXXXXXIPCLKT---PKRC-YFFGDVSSKRDPTAYLKYITTLYD 133
E++ P +P R ++FG S+ PT Y++ I L++
Sbjct: 302 EYSTPYALSLSEIVQAQFGLVALPHKNNNIVKSRVEHYFGFTSAVNAPTRYVEIIEELFN 361
Query: 134 YYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKYITPTHVVKIN 187
+++ ++ N LI+NTPGWVKG G ++L + K I P ++ ++
Sbjct: 362 HHQTKFSQRNH----------LIINTPGWVKGYGKELLNQITKIINPDKLILLS 405
>UNIPROTKB|Q6BQV7 [details] [associations]
symbol:GRC3 "Polynucleotide 5'-hydroxyl-kinase GRC3"
species:284592 "Debaryomyces hansenii CBS767" [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0051731 "polynucleotide
5'-hydroxyl-kinase activity" evidence=ISS] GO:GO:0005524
GO:GO:0005730 GO:GO:0006364 EMBL:CR382137 GenomeReviews:CR382137_GR
eggNOG:COG1341 OrthoDB:EOG4ZPJ45 GO:GO:0051731 OMA:MIIGNKN
RefSeq:XP_459413.2 GeneID:2902894 KEGG:dha:DEHA2E01892g
HOGENOM:HOG000248705 Uniprot:Q6BQV7
Length = 680
Score = 183 (69.5 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 52/198 (26%), Positives = 90/198 (45%)
Query: 15 IYIPREWSDAADSIAYDSNTSP-PPIAFICGAKNCGKTTFSRHLVN-VLLQRYKKVAYLD 72
I I + W + + D + P I G KN GK+T S+ L+N ++L V+YLD
Sbjct: 238 ISIEKLWLNQIQLLISDIHEDLIPKTIMIIGNKNSGKSTLSKTLLNSLILANQNTVSYLD 297
Query: 73 TDVGQPEFTAPGFXXXXXXXXXXXXXXIPCLKTPKRC--YFFGDVSSKRDPTAYLKYITT 130
D GQ EF+ P +P + + +++G + + P+ Y+ I
Sbjct: 298 LDPGQSEFSMPYCLSLTNHSKPIIGMNVPKVSGDEDSVSHYYGFTTPQSQPSQYVSIIKA 357
Query: 131 LYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKYITPTHVVKINISF 190
L+ Y + Y G LI+NTPGW+KG G ++L ++ +I P ++ ++ +
Sbjct: 358 LFREYDQVY------RPRGHH---LIINTPGWIKGYGKELLNELTAFINPNQLILLSNNT 408
Query: 191 EKKNLPAGAFWLDNFEGV 208
+ N+ DN G+
Sbjct: 409 DNDNMDNS----DNLSGL 422
>WB|WBGene00010709 [details] [associations]
symbol:nol-9 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] GO:GO:0005524 GO:GO:0040010
GO:GO:0005730 GO:GO:0000003 GO:GO:0006974 GO:GO:0006364
InterPro:IPR010655 Pfam:PF06807 eggNOG:COG1341 GO:GO:0051731
GeneTree:ENSGT00390000012406 HOGENOM:HOG000016406 EMBL:Z83114
RefSeq:NP_001255744.1 RefSeq:NP_001255745.1
ProteinModelPortal:Q9U3B6 SMR:Q9U3B6 PaxDb:Q9U3B6
EnsemblMetazoa:K09B11.2a.1 EnsemblMetazoa:K09B11.2a.2 GeneID:187190
KEGG:cel:CELE_K09B11.2 UCSC:K09B11.2 CTD:187190 WormBase:K09B11.2a
WormBase:K09B11.2b InParanoid:Q9U3B6 OMA:PALQCIG NextBio:934418
ArrayExpress:Q9U3B6 Uniprot:Q9U3B6
Length = 549
Score = 176 (67.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 87/335 (25%), Positives = 141/335 (42%)
Query: 44 GAKNCGKTTFSRHLVNVLLQR-YKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXXXXIPC 102
G K GK+ R LVN L Y+ V LD D+GQ EFT G
Sbjct: 190 GHKGAGKSNLMRSLVNRCLSNGYEHVYVLDCDIGQSEFTPCGCLSLTKVTSPILGKPHGH 249
Query: 103 LKTP-KRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPG 161
+ + +F+GD++ RD Y+ D + + + F PG I+N+ G
Sbjct: 250 QRASFENSFFYGDITV-RDINLYM-------DIFERLFNKFKVISEPGSV---CIINSMG 298
Query: 162 WVKGIGYDILVDMLKYITPTHVVKINISFEKKNLPAGAFWLDNFEGVDVNLIEISSARQD 221
WV G +IL + + P V+I F + F L+ E N++EI + +
Sbjct: 299 WVTDEGAEILDGITRVTDPELFVEI---FRDQTEARYQF-LNRAEH---NIVEIFA--NN 349
Query: 222 SFNRSVLV-QK--DARLLRDLRIMAYFRQCFPSDLNITIIKELAQALAAYPPYQ--VPIS 276
S L QK A L+R+L I+ YF P ++ ++A + VP+
Sbjct: 350 SIGVIGLPPQKRLPAALIRELTIVGYFSSRLPRP-SLASFPKVAPYKLRFENVTICVPVD 408
Query: 277 S-IKIRHLYCQVPRSEIFYSLNAT------IVG---LAISSDASENLP--HCVGLGIVRG 324
++ H++ + + +N T + G L N P C+G GI+RG
Sbjct: 409 LLVEDSHVFSSINTQIMALCINNTDLKPRKLYGKDDLPSICVIDGNSPALQCIGFGIIRG 468
Query: 325 IDTLKGLLYVITPVPPGILEKVDLFLQGF-IQIPT 358
+ + +++V+TPV LE+ + ++G IQ PT
Sbjct: 469 VSVEERIIFVVTPVDLLKLEEPPVLVRGMRIQTPT 503
>UNIPROTKB|Q9U3B6 [details] [associations]
symbol:nol-9 "Polynucleotide 5'-hydroxyl-kinase nol-9"
species:6239 "Caenorhabditis elegans" [GO:0051731 "polynucleotide
5'-hydroxyl-kinase activity" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=ISS] GO:GO:0005524 GO:GO:0040010 GO:GO:0005730
GO:GO:0000003 GO:GO:0006974 GO:GO:0006364 InterPro:IPR010655
Pfam:PF06807 eggNOG:COG1341 GO:GO:0051731
GeneTree:ENSGT00390000012406 HOGENOM:HOG000016406 EMBL:Z83114
RefSeq:NP_001255744.1 RefSeq:NP_001255745.1
ProteinModelPortal:Q9U3B6 SMR:Q9U3B6 PaxDb:Q9U3B6
EnsemblMetazoa:K09B11.2a.1 EnsemblMetazoa:K09B11.2a.2 GeneID:187190
KEGG:cel:CELE_K09B11.2 UCSC:K09B11.2 CTD:187190 WormBase:K09B11.2a
WormBase:K09B11.2b InParanoid:Q9U3B6 OMA:PALQCIG NextBio:934418
ArrayExpress:Q9U3B6 Uniprot:Q9U3B6
Length = 549
Score = 176 (67.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 87/335 (25%), Positives = 141/335 (42%)
Query: 44 GAKNCGKTTFSRHLVNVLLQR-YKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXXXXIPC 102
G K GK+ R LVN L Y+ V LD D+GQ EFT G
Sbjct: 190 GHKGAGKSNLMRSLVNRCLSNGYEHVYVLDCDIGQSEFTPCGCLSLTKVTSPILGKPHGH 249
Query: 103 LKTP-KRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPG 161
+ + +F+GD++ RD Y+ D + + + F PG I+N+ G
Sbjct: 250 QRASFENSFFYGDITV-RDINLYM-------DIFERLFNKFKVISEPGSV---CIINSMG 298
Query: 162 WVKGIGYDILVDMLKYITPTHVVKINISFEKKNLPAGAFWLDNFEGVDVNLIEISSARQD 221
WV G +IL + + P V+I F + F L+ E N++EI + +
Sbjct: 299 WVTDEGAEILDGITRVTDPELFVEI---FRDQTEARYQF-LNRAEH---NIVEIFA--NN 349
Query: 222 SFNRSVLV-QK--DARLLRDLRIMAYFRQCFPSDLNITIIKELAQALAAYPPYQ--VPIS 276
S L QK A L+R+L I+ YF P ++ ++A + VP+
Sbjct: 350 SIGVIGLPPQKRLPAALIRELTIVGYFSSRLPRP-SLASFPKVAPYKLRFENVTICVPVD 408
Query: 277 S-IKIRHLYCQVPRSEIFYSLNAT------IVG---LAISSDASENLP--HCVGLGIVRG 324
++ H++ + + +N T + G L N P C+G GI+RG
Sbjct: 409 LLVEDSHVFSSINTQIMALCINNTDLKPRKLYGKDDLPSICVIDGNSPALQCIGFGIIRG 468
Query: 325 IDTLKGLLYVITPVPPGILEKVDLFLQGF-IQIPT 358
+ + +++V+TPV LE+ + ++G IQ PT
Sbjct: 469 VSVEERIIFVVTPVDLLKLEEPPVLVRGMRIQTPT 503
>UNIPROTKB|Q6CQ06 [details] [associations]
symbol:GRC3 "Polynucleotide 5'-hydroxyl-kinase GRC3"
species:284590 "Kluyveromyces lactis NRRL Y-1140" [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0051731 "polynucleotide
5'-hydroxyl-kinase activity" evidence=ISS] GO:GO:0005524
GO:GO:0005730 GO:GO:0006364 InterPro:IPR010655 Pfam:PF06807
eggNOG:COG1341 HOGENOM:HOG000112809 KO:K06947 OrthoDB:EOG4ZPJ45
GO:GO:0051731 OMA:MIIGNKN EMBL:CR382125 RefSeq:XP_453983.1
ProteinModelPortal:Q6CQ06 STRING:Q6CQ06 GeneID:2894158
GenomeReviews:CR382125_GR KEGG:kla:KLLA0E00815g Uniprot:Q6CQ06
Length = 631
Score = 174 (66.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 74/319 (23%), Positives = 126/319 (39%)
Query: 17 IPREWSDAADSIA-YDSNTSPPPIAFICGAKNCGKTTFSRHLVNVLLQR-----YKKVAY 70
I EWS D + + +N+S + G KN GK+T R LV L Y+ + Y
Sbjct: 226 ISTEWSTVIDEMRIFHANSSQDMRVMVIGGKNSGKSTLMRLLVQKFLHSNNDLSYEAIHY 285
Query: 71 LDTDVGQPEFTAP-GFXXXXXXXXXXXXXXIPCLK--TPKRCYFFGDVSSKRDPTAYLKY 127
LD D GQPE++ P C T + +F G S + P Y
Sbjct: 286 LDIDPGQPEYSPPESISWNKVDPKSMSLGQHLCQGRFTTIKQHFIGSSSPQDWPETYSNA 345
Query: 128 ITTLYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKYITPTHVVKIN 187
+ +L ++ E +M G + L N PGW+KG G I+ L + PTH++ ++
Sbjct: 346 VESLLKEWQTENFM-------GTSFL----NIPGWIKGFGVKIINHALDHFKPTHIIFLS 394
Query: 188 ---ISFEKKNLPAGAFWLDNFEGVDVNLIEISSARQDSFNRSVLVQKDARLLRDLRIMAY 244
+ F + AF ++++ S L + +A +R +I AY
Sbjct: 395 YNGLPFSSEIKVPDAFSTTQRSTYKPIILQLHSPAVGKHISHALQRFNAAKIRQFKITAY 454
Query: 245 FRQCFPSDLNITIIKELAQALAAYPPYQVPISSIKIRHL-YCQVPRSEIFYS-LNATIVG 302
+ + D N I L P I + I + Q S +++ + ++ G
Sbjct: 455 LHKKY--DRNFVI-----NPLVMQKPQLTSIGNRGIVGFEFLQYSNSSLYHDDIKLSLDG 507
Query: 303 LAISSDASENLPHCVGLGI 321
++ +++ P + GI
Sbjct: 508 TVVALHRADSTPDVLFKGI 526
Score = 45 (20.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 317 VGLGIVRGIDTLKGLLYVITP 337
VGL ++ ID + L+Y+ P
Sbjct: 541 VGLALIHSIDLEQSLIYMYIP 561
>UNIPROTKB|Q2U0C4 [details] [associations]
symbol:grc3 "Polynucleotide 5'-hydroxyl-kinase grc3"
species:510516 "Aspergillus oryzae RIB40" [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0051731 "polynucleotide
5'-hydroxyl-kinase activity" evidence=ISS] GO:GO:0005524
GO:GO:0005730 GO:GO:0006364 eggNOG:COG1341 GO:GO:0051731
HOGENOM:HOG000048349 OrthoDB:EOG4NW2TR EMBL:AP007171
ProteinModelPortal:Q2U0C4 GenomeReviews:AP007171_GR Uniprot:Q2U0C4
Length = 831
Score = 178 (67.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 78/315 (24%), Positives = 139/315 (44%)
Query: 15 IYIPREWSDAADSIAYDSNTSPPPIAFICGAKNCGKTTFSRHLVNVLLQ-------RYKK 67
+++ ++WS A S++ A ICG K GK+TFSR+L+N LL Y
Sbjct: 309 LHLEKQWSSAIKSLSQRGGRLK---ALICGPKASGKSTFSRYLLNHLLSPAPQTETNYCN 365
Query: 68 ---VAYLDTDVGQPEFTAPG--FXXXXXXXXXXXXXXIPCLKTPK-----RCYFFGDVSS 117
VA+LD D GQPEF+ G + P L + + R + G S
Sbjct: 366 TDGVAFLDLDPGQPEFSPMGQVYLAHLRSPVFGPPFSHPSLDSSQEGTIIRAHHIGATSP 425
Query: 118 KRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKY 177
K DP Y+ L D YR + P + PLI+N PGW+ G+G ++ +++
Sbjct: 426 KEDPDHYVLAAMDLMDRYRALLASY-----P---QCPLIINYPGWIFGLGLEVATWLVRS 477
Query: 178 ITPTHVVKINISFEKKN-LPAGAFWLDNFEGVDVNLIEISSARQDSFNRSVLVQKDARLL 236
+ + VV ++ + +P G + + + + S D +RS + L
Sbjct: 478 LGLSDVVYMSEKGPTEVVMPLGQAAQEAMAPLTI----LPSQPTDFVSRS------SAQL 527
Query: 237 RDLRIMAYFRQCFPSDLN--ITIIKELAQALAAYPPYQVPISSIK-IRHLYCQVPRSEIF 293
R +++ +YF P++++ + + K +++ + Y P IK + + Q+ +
Sbjct: 528 RSMQMQSYFHMTRPTEISNPLWLEKPISRTRPFHVHYAGPKQGIKGVMVMGSQIDPDLLQ 587
Query: 294 YSLNATIVGL-AISS 307
L+ +IV + A+ S
Sbjct: 588 EVLDGSIVAVVAVES 602
>UNIPROTKB|Q6FW56 [details] [associations]
symbol:GRC3 "Polynucleotide 5'-hydroxyl-kinase GRC3"
species:284593 "Candida glabrata CBS 138" [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0051731 "polynucleotide
5'-hydroxyl-kinase activity" evidence=ISS] GO:GO:0005524
GO:GO:0005730 GO:GO:0006364 HOGENOM:HOG000112809 KO:K06947
OrthoDB:EOG4ZPJ45 GO:GO:0051731 EMBL:CR380950 RefSeq:XP_445538.1
ProteinModelPortal:Q6FW56 GeneID:2887173 GenomeReviews:CR380950_GR
KEGG:cgr:CAGL0D02816g OMA:MIIGNKN Uniprot:Q6FW56
Length = 630
Score = 174 (66.3 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 78/319 (24%), Positives = 131/319 (41%)
Query: 5 MPQTENPSPAIYIPREWSDAADSIAY-DSNTSPPPIAFICGAKNCGKTTFSRHLVNVLLQ 63
MP T + I + W++ + + + N+ + G KN GK+TF R LV +L
Sbjct: 207 MPATLQEITTLNISKSWTNCLQKLKFINQNSIHDTRIMVIGGKNSGKSTFLRSLVEKVLY 266
Query: 64 RY----KKVA---YLDTDVGQPEFTAPGFXXXXXXXXXXXXXXIPCLK-TPK--RCYFFG 113
+ K V+ YLD D GQPEF+ P + +P+ + Y+ G
Sbjct: 267 SHDISDKSVSEMLYLDLDPGQPEFSHPDCISMTRLTSNDMNFGQSFGQASPEVLKQYYIG 326
Query: 114 DVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVD 173
S + PT YL + L + E MF G + +N PGWVKG G +IL
Sbjct: 327 SPSPQEYPTRYLNMVNKLITEF--EDTMF-----AGIS----CINLPGWVKGFGLNILQK 375
Query: 174 MLKYITPTHVVKINIS-----FEKKNLPAG--AFWLDNFEGVDVNL-IEISSARQDSFNR 225
+L+ PT +V + F + +P + + + + E S+A + N
Sbjct: 376 VLEIYKPTDIVYLESPSTVRHFSELRIPKSFSSTMMTEYSPRSYRIPAEFSNA---AINN 432
Query: 226 SVLVQKDARLLRDLRIMAYFRQCFPSDLNITIIKELAQALAAYPPY-QVPISSIKIRHLY 284
S ++ +R +++ F + S++ + L Y + I +I I +
Sbjct: 433 SPEIKFAPSDIRTYKLLCLFHRSDTSNVPTFDFRPLIAKSPKKISYGRAGIHTIIINIEF 492
Query: 285 CQVPRSEIFYSLNATIVGL 303
VP E+ +L TIV +
Sbjct: 493 ALVPSHELIQALEGTIVAI 511
>ASPGD|ASPL0000076763 [details] [associations]
symbol:AN4599 species:162425 "Emericella nidulans"
[GO:0006363 "termination of RNA polymerase I transcription"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0051731 "polynucleotide 5'-hydroxyl-kinase activity"
evidence=IEA] [GO:0030874 "nucleolar chromatin" evidence=IEA]
GO:GO:0005524 GO:GO:0005730 EMBL:BN001303 EMBL:AACD01000079
GO:GO:0006364 eggNOG:COG1341 GO:GO:0051731 HOGENOM:HOG000048349
OrthoDB:EOG4NW2TR RefSeq:XP_662203.1 ProteinModelPortal:Q5B4D1
EnsemblFungi:CADANIAT00005837 GeneID:2872397 KEGG:ani:AN4599.2
OMA:IAFRENE Uniprot:Q5B4D1
Length = 816
Score = 156 (60.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 52/187 (27%), Positives = 81/187 (43%)
Query: 15 IYIPREWSDAADSIAYDSNTSPPPIAFICGAKNCGKTTFSRHLVNVLLQ-------RYKK 67
+++ ++WS A ++ + ICG K GK+TF R+L+N LL Y
Sbjct: 306 LHLEKQWSAAIKVLSQRAGRLQ---VLICGPKASGKSTFGRYLLNHLLSPAPQPELNYTN 362
Query: 68 ---VAYLDTDVGQPEFTAPG--FXXXXXXXXXXXXXXIPCLKTPK-----RCYFFGDVSS 117
VA+LD D GQPEF G + P L + R + G S
Sbjct: 363 TDGVAFLDLDPGQPEFLPMGQVYLAHLRSPVFGPPFTHPSLNNEREGTIIRAHHIGATSP 422
Query: 118 KRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKY 177
K DP Y+ L + YR + P + PLI+N PGW+ G+G ++ +++
Sbjct: 423 KEDPDHYVLAAANLMEQYRTLLATY-----P---QCPLIINYPGWIFGLGLEVATYLIQS 474
Query: 178 ITPTHVV 184
+ + VV
Sbjct: 475 LGLSDVV 481
Score = 44 (20.5 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 317 VGLGIVRGIDTLKGLLYVITPVP 339
+GL ++R I+ L ++TP+P
Sbjct: 675 LGLALIRSINPDTQTLDLVTPIP 697
>UNIPROTKB|Q5B4D1 [details] [associations]
symbol:grc3 "Polynucleotide 5'-hydroxyl-kinase grc3"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0051731 "polynucleotide
5'-hydroxyl-kinase activity" evidence=ISS] GO:GO:0005524
GO:GO:0005730 EMBL:BN001303 EMBL:AACD01000079 GO:GO:0006364
eggNOG:COG1341 GO:GO:0051731 HOGENOM:HOG000048349 OrthoDB:EOG4NW2TR
RefSeq:XP_662203.1 ProteinModelPortal:Q5B4D1
EnsemblFungi:CADANIAT00005837 GeneID:2872397 KEGG:ani:AN4599.2
OMA:IAFRENE Uniprot:Q5B4D1
Length = 816
Score = 156 (60.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 52/187 (27%), Positives = 81/187 (43%)
Query: 15 IYIPREWSDAADSIAYDSNTSPPPIAFICGAKNCGKTTFSRHLVNVLLQ-------RYKK 67
+++ ++WS A ++ + ICG K GK+TF R+L+N LL Y
Sbjct: 306 LHLEKQWSAAIKVLSQRAGRLQ---VLICGPKASGKSTFGRYLLNHLLSPAPQPELNYTN 362
Query: 68 ---VAYLDTDVGQPEFTAPG--FXXXXXXXXXXXXXXIPCLKTPK-----RCYFFGDVSS 117
VA+LD D GQPEF G + P L + R + G S
Sbjct: 363 TDGVAFLDLDPGQPEFLPMGQVYLAHLRSPVFGPPFTHPSLNNEREGTIIRAHHIGATSP 422
Query: 118 KRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKY 177
K DP Y+ L + YR + P + PLI+N PGW+ G+G ++ +++
Sbjct: 423 KEDPDHYVLAAANLMEQYRTLLATY-----P---QCPLIINYPGWIFGLGLEVATYLIQS 474
Query: 178 ITPTHVV 184
+ + VV
Sbjct: 475 LGLSDVV 481
Score = 44 (20.5 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 317 VGLGIVRGIDTLKGLLYVITPVP 339
+GL ++R I+ L ++TP+P
Sbjct: 675 LGLALIRSINPDTQTLDLVTPIP 697
>UNIPROTKB|Q6C5P9 [details] [associations]
symbol:GRC3 "Polynucleotide 5'-hydroxyl-kinase GRC3"
species:284591 "Yarrowia lipolytica CLIB122" [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0051731 "polynucleotide
5'-hydroxyl-kinase activity" evidence=ISS] GO:GO:0005524
GO:GO:0005730 GO:GO:0006364 eggNOG:COG1341 OrthoDB:EOG4ZPJ45
GO:GO:0051731 EMBL:CR382131 RefSeq:XP_504013.1
ProteinModelPortal:Q6C5P9 GeneID:2911583 GenomeReviews:CR382131_GR
KEGG:yli:YALI0E16258g Uniprot:Q6C5P9
Length = 599
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 49/180 (27%), Positives = 80/180 (44%)
Query: 13 PAIYIPREWSDAADSIAYDSNTSPPPIAFICGAKNCGKTTFSRHLVNVLLQRYK--KVAY 70
P IY EW++ D I ++S + G++N GK+TF ++L + + VA+
Sbjct: 229 PGIY--DEWAEVCDDIRRLKHSS----TMVVGSQNTGKSTFCKYLSAFMTTKKTGTSVAF 282
Query: 71 LDTDVGQPEFTAPG-FXXXXXXXXXXXXXXI--PC---LKTPKRCYFFGDVSSKRDPTAY 124
+D D EFTAPG I P + P F G + K D Y
Sbjct: 283 VDLDPSNCEFTAPGQVSVTVIGAGHLSPYSILGPSFTHVTAPTYSRFVGYNNPKDDTRGY 342
Query: 125 LKYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDMLKYITPTHVV 184
++ + D+ + G +LPL+ NT GWV+ G+D+L ++ ++ P+ VV
Sbjct: 343 IEACKAVIDFAK------------G-LKLPLVFNTCGWVRAAGHDLLRQLIDHVKPSDVV 389
>TAIR|locus:2084938 [details] [associations]
symbol:CLPS3 "CLP-similar protein 3" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005849 "mRNA cleavage
factor complex" evidence=ISS;IPI] [GO:0006777 "Mo-molybdopterin
cofactor biosynthetic process" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006397 "mRNA processing"
evidence=RCA;IMP] [GO:0009908 "flower development" evidence=IMP]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA;IMP] [GO:0048827 "phyllome development"
evidence=IMP] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0019915
"lipid storage" evidence=RCA] [GO:0030422 "production of siRNA
involved in RNA interference" evidence=RCA] [GO:0035196 "production
of miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006397 GO:GO:0010228
GO:GO:0009908 EMBL:AC011437 eggNOG:COG5623 HOGENOM:HOG000231935
KO:K14399 OMA:GFSVQAP InterPro:IPR010655 Pfam:PF06807 GO:GO:0005849
GO:GO:0048827 ProtClustDB:CLSN2684287 EMBL:AY062866 EMBL:AY128751
IPI:IPI00524800 RefSeq:NP_187119.1 RefSeq:NP_974220.1
UniGene:At.27208 SMR:Q9SR06 IntAct:Q9SR06 STRING:Q9SR06
EnsemblPlants:AT3G04680.1 EnsemblPlants:AT3G04680.2 GeneID:819626
KEGG:ath:AT3G04680 TAIR:At3g04680 InParanoid:Q9SR06
Genevestigator:Q9SR06 Uniprot:Q9SR06
Length = 444
Score = 135 (52.6 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 37/150 (24%), Positives = 66/150 (44%)
Query: 24 AADSIAYDSNTSPPPIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAP 83
A S + D +S P + G + GK+T ++ L++ ++ + ++D DVGQ T P
Sbjct: 117 AKASTSNDPESSQGPRVIVVGPTDSGKSTLTKMLLSWAAKQGWRPTFVDLDVGQGSITIP 176
Query: 84 G-FXXXXXXXXXXXXXXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMF 142
G P Y++G S + Y + L K++
Sbjct: 177 GSIAAAPIEMPLDPVEGFPL--DMALVYYYGHASPNMNVELYKALVKELAQVLEKQFVGN 234
Query: 143 NESESPGRTELPLIVNTPGWVKGIGYDILV 172
ES + G +++NT GW++GIGY++L+
Sbjct: 235 PESRAAG-----MVINTMGWIEGIGYELLL 259
>UNIPROTKB|F1NA64 [details] [associations]
symbol:CLP1 "Polyribonucleotide 5'-hydroxyl-kinase Clp1"
species:9031 "Gallus gallus" [GO:0000214 "tRNA-intron endonuclease
complex" evidence=IEA] [GO:0006388 "tRNA splicing, via
endonucleolytic cleavage and ligation" evidence=IEA] [GO:0030423
"targeting of mRNA for destruction involved in RNA interference"
evidence=IEA] [GO:0035087 "siRNA loading onto RISC involved in RNA
interference" evidence=IEA] [GO:0051733 "polydeoxyribonucleotide
kinase activity" evidence=IEA] [GO:0051736 "ATP-dependent
polyribonucleotide 5'-hydroxyl-kinase activity" evidence=IEA]
GO:GO:0035087 GO:GO:0030423 GeneTree:ENSGT00390000000344
OMA:GFSVQAP GO:GO:0000214 GO:GO:0051736 GO:GO:0051733 GO:GO:0006388
InterPro:IPR010655 Pfam:PF06807 IPI:IPI00603182 EMBL:AADN02050749
Ensembl:ENSGALT00000011921 Uniprot:F1NA64
Length = 425
Score = 132 (51.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 76/316 (24%), Positives = 125/316 (39%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P + G + GK+T R L+N ++ ++ +++ DVGQ + PG
Sbjct: 115 PRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADV 174
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
L+ P Y FG + + Y K + L D + + + + G ++
Sbjct: 175 EEGFSLQAPL-VYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSG-----CVI 228
Query: 158 NTPGWVKGIGYDILVDMLKYITPTHVVKIN---ISFE-KKNLP--AGAFWLDNFEGVDVN 211
NT GWVKG GY LV VV ++ + E K++LP L GV
Sbjct: 229 NTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGV--- 285
Query: 212 LIEISSARQDSFNRSVLVQKDARLLRDLRIMAY-FRQCF-PS--DLNITIIKELAQALAA 267
+E R F R +D R+ R Y FR CF P D+ + +K
Sbjct: 286 -VE----RSKDFRREC---RDDRI----REYFYGFRGCFYPHAFDVKFSDVKIYKVGAPT 333
Query: 268 YPPYQVPISSIKIRHLYCQVP----RSEIFYSLNATIVGLAISSDASENLPHCVGLGIVR 323
P +P+ + + VP R + + L+ V +A S D + + G +V
Sbjct: 334 IPDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLS---VSMADSPDDNISETSVAGFIVVT 390
Query: 324 GIDTLKGLLYVITPVP 339
G+D + + V++P P
Sbjct: 391 GVDLERQVFTVLSPAP 406
>UNIPROTKB|Q5ZJL4 [details] [associations]
symbol:CLP1 "Polyribonucleotide 5'-hydroxyl-kinase Clp1"
species:9031 "Gallus gallus" [GO:0046404 "ATP-dependent
polydeoxyribonucleotide 5'-hydroxyl-kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0051733 "polydeoxyribonucleotide
kinase activity" evidence=ISS] [GO:0006388 "tRNA splicing, via
endonucleolytic cleavage and ligation" evidence=ISS] [GO:0000214
"tRNA-intron endonuclease complex" evidence=ISS] [GO:0051736
"ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity"
evidence=ISS] [GO:0035087 "siRNA loading onto RISC involved in RNA
interference" evidence=ISS] [GO:0030423 "targeting of mRNA for
destruction involved in RNA interference" evidence=ISS]
GO:GO:0005524 GO:GO:0006397 GO:GO:0035087 GO:GO:0030423 CTD:10978
eggNOG:COG5623 HOGENOM:HOG000231935 KO:K14399 OrthoDB:EOG4K0QNF
GO:GO:0000214 GO:GO:0046404 GO:GO:0051736 GO:GO:0051733
GO:GO:0006388 InterPro:IPR010655 Pfam:PF06807 EMBL:AJ720420
IPI:IPI00603182 RefSeq:NP_001012292.1 UniGene:Gga.2011
ProteinModelPortal:Q5ZJL4 STRING:Q5ZJL4 GeneID:423131
KEGG:gga:423131 InParanoid:Q5ZJL4 NextBio:20825645 Uniprot:Q5ZJL4
Length = 425
Score = 132 (51.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 76/316 (24%), Positives = 125/316 (39%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P + G + GK+T R L+N ++ ++ +++ DVGQ + PG
Sbjct: 115 PRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADV 174
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
L+ P Y FG + + Y K + L D + + + + G ++
Sbjct: 175 EEGFSLQAPL-VYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSG-----CVI 228
Query: 158 NTPGWVKGIGYDILVDMLKYITPTHVVKIN---ISFE-KKNLP--AGAFWLDNFEGVDVN 211
NT GWVKG GY LV VV ++ + E K++LP L GV
Sbjct: 229 NTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGV--- 285
Query: 212 LIEISSARQDSFNRSVLVQKDARLLRDLRIMAY-FRQCF-PS--DLNITIIKELAQALAA 267
+E R F R +D R+ R Y FR CF P D+ + +K
Sbjct: 286 -VE----RSKDFRREC---RDDRI----REYFYGFRGCFYPHAFDVKFSDVKIYKVGAPT 333
Query: 268 YPPYQVPISSIKIRHLYCQVP----RSEIFYSLNATIVGLAISSDASENLPHCVGLGIVR 323
P +P+ + + VP R + + L+ V +A S D + + G +V
Sbjct: 334 IPDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLS---VSMADSPDDNISETSVAGFIVVT 390
Query: 324 GIDTLKGLLYVITPVP 339
G+D + + V++P P
Sbjct: 391 GVDLERQVFTVLSPAP 406
>UNIPROTKB|B4MRZ9 [details] [associations]
symbol:cbc "Protein CLP1 homolog" species:7260 "Drosophila
willistoni" [GO:0000214 "tRNA-intron endonuclease complex"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006388 "tRNA splicing, via endonucleolytic cleavage and
ligation" evidence=ISS] GO:GO:0005524 GO:GO:0006397 EMBL:CH963850
eggNOG:COG5623 KO:K14399 OMA:GFSVQAP GO:GO:0000214 GO:GO:0006388
InterPro:IPR010655 Pfam:PF06807 OrthoDB:EOG4VHHNQ
RefSeq:XP_002063902.1 STRING:B4MRZ9 EnsemblMetazoa:FBtr0246572
GeneID:6640990 KEGG:dwi:Dwil_GK15921 FlyBase:FBgn0217923
InParanoid:B4MRZ9 Uniprot:B4MRZ9
Length = 425
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 38/132 (28%), Positives = 55/132 (41%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPG-FXXXXXXXXXXX 96
P+A + G + GK+T R L+N ++ ++ Y D DVGQ PG
Sbjct: 112 PVAMVVGPMDVGKSTLCRILLNYAVRVGRRPLYADIDVGQGAIAIPGNVATILIERPASI 171
Query: 97 XXXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLI 156
P KT Y FG S + Y ++ + + ++S G +I
Sbjct: 172 EEGFP--KTAPLVYHFGHKSPSGNSVLYNAVVSKMAEVTLNSLSGNKRTQSSG-----II 224
Query: 157 VNTPGWVKGIGY 168
VNT GWVKG GY
Sbjct: 225 VNTCGWVKGSGY 236
>UNIPROTKB|B4KML2 [details] [associations]
symbol:cbc "Protein CLP1 homolog" species:7230 "Drosophila
mojavensis" [GO:0000214 "tRNA-intron endonuclease complex"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006388 "tRNA splicing, via endonucleolytic cleavage and
ligation" evidence=ISS] GO:GO:0005524 GO:GO:0006397 EMBL:CH933808
KO:K14399 GO:GO:0000214 GO:GO:0006388 InterPro:IPR010655
Pfam:PF06807 OrthoDB:EOG4VHHNQ RefSeq:XP_002006924.1
EnsemblMetazoa:FBtr0172061 GeneID:6581179 KEGG:dmo:Dmoj_GI21336
FlyBase:FBgn0144066 InParanoid:B4KML2 Uniprot:B4KML2
Length = 425
Score = 125 (49.1 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 37/135 (27%), Positives = 57/135 (42%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P+ + G + GK+T R L+N ++ ++ Y D DVGQ + PG
Sbjct: 112 PVILVVGPMDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGAISIPGNIATILIERPASV 171
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
KT Y FG S + Y ++ + + + ++S G +IV
Sbjct: 172 EE-GFAKTAPLVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLDANKRTKSSG-----IIV 225
Query: 158 NTPGWVKGIGYDILV 172
NT GWVKG GY L+
Sbjct: 226 NTCGWVKGYGYKHLL 240
>MGI|MGI:2138968 [details] [associations]
symbol:Clp1 "CLP1, cleavage and polyadenylation factor I
subunit" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000214 "tRNA-intron endonuclease
complex" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006388 "tRNA splicing, via
endonucleolytic cleavage and ligation" evidence=ISO] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0030423 "targeting of mRNA
for destruction involved in RNA interference" evidence=ISO]
[GO:0035087 "siRNA loading onto RISC involved in RNA interference"
evidence=ISO] [GO:0046404 "ATP-dependent polydeoxyribonucleotide
5'-hydroxyl-kinase activity" evidence=IEA] [GO:0051733
"polydeoxyribonucleotide kinase activity" evidence=ISO] [GO:0051736
"ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity"
evidence=ISO] MGI:MGI:2138968 GO:GO:0005524 GO:GO:0006397
GO:GO:0035087 GO:GO:0030423 CTD:10978 eggNOG:COG5623
GeneTree:ENSGT00390000000344 HOGENOM:HOG000231935 KO:K14399
OMA:GFSVQAP OrthoDB:EOG4K0QNF GO:GO:0000214 GO:GO:0046404
GO:GO:0051736 GO:GO:0051733 GO:GO:0006388 InterPro:IPR010655
Pfam:PF06807 HOVERGEN:HBG000921 EMBL:AK077647 EMBL:BC003237
IPI:IPI00116934 RefSeq:NP_598601.1 UniGene:Mm.21583
ProteinModelPortal:Q99LI9 SMR:Q99LI9 IntAct:Q99LI9 STRING:Q99LI9
PhosphoSite:Q99LI9 PRIDE:Q99LI9 DNASU:98985
Ensembl:ENSMUST00000028475 Ensembl:ENSMUST00000165219 GeneID:98985
KEGG:mmu:98985 InParanoid:Q99LI9 NextBio:353735 Bgee:Q99LI9
Genevestigator:Q99LI9 GermOnline:ENSMUSG00000027079 Uniprot:Q99LI9
Length = 425
Score = 124 (48.7 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 72/314 (22%), Positives = 120/314 (38%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P + G + GK+T R L+N ++ ++ Y++ DVGQ + PG
Sbjct: 115 PRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADV 174
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
++ P Y FG + + Y K + L D + + + + G ++
Sbjct: 175 EEGFSIQAPL-VYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSG-----CVI 228
Query: 158 NTPGWVKGIGYDILVDMLKYITPTHVVKIN---ISFE-KKNLP--AGAFWLDNFEGVDVN 211
NT GWVKG GY LV VV ++ + E K++LP L GV
Sbjct: 229 NTCGWVKGYGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGV--- 285
Query: 212 LIEISSARQDSFNRSVLVQKDARLLRDLRIMAY-FRQCF-PSDLNITI--IKELAQALAA 267
+E R F R +D R+ R Y FR CF P N+ +K
Sbjct: 286 -VE----RSKDFRREC---RDERI----REYFYGFRGCFYPHAFNVKFSDVKIYKVGAPT 333
Query: 268 YPPYQVPISSIKIRHLYCQVPRSEIFYSLNATIVGLAISSDASENLPHC--VGLGIVRGI 325
P +P+ + + VP + + ++ ++ + ENL G +V +
Sbjct: 334 IPDSCLPLGMSQEDNQLKLVPVTP-GRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSV 392
Query: 326 DTLKGLLYVITPVP 339
D + V++P P
Sbjct: 393 DVEHQVFTVLSPAP 406
>RGD|1307679 [details] [associations]
symbol:Clp1 "cleavage and polyadenylation factor I subunit 1"
species:10116 "Rattus norvegicus" [GO:0000214 "tRNA-intron
endonuclease complex" evidence=ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006388 "tRNA splicing, via endonucleolytic
cleavage and ligation" evidence=ISO;ISS] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0030423 "targeting of mRNA for
destruction involved in RNA interference" evidence=ISO;ISS]
[GO:0035087 "siRNA loading onto RISC involved in RNA interference"
evidence=ISO;ISS] [GO:0046404 "ATP-dependent
polydeoxyribonucleotide 5'-hydroxyl-kinase activity" evidence=IEA]
[GO:0051733 "polydeoxyribonucleotide kinase activity"
evidence=ISO;ISS] [GO:0051736 "ATP-dependent polyribonucleotide
5'-hydroxyl-kinase activity" evidence=ISO;ISS] RGD:1307679
GO:GO:0005524 GO:GO:0006397 GO:GO:0035087 GO:GO:0030423
EMBL:CH473949 CTD:10978 eggNOG:COG5623 GeneTree:ENSGT00390000000344
HOGENOM:HOG000231935 KO:K14399 OMA:GFSVQAP OrthoDB:EOG4K0QNF
GO:GO:0000214 GO:GO:0046404 GO:GO:0051736 GO:GO:0051733
GO:GO:0006388 InterPro:IPR010655 Pfam:PF06807 EMBL:BC087130
IPI:IPI00193975 RefSeq:NP_001009599.1 UniGene:Rn.144332
ProteinModelPortal:Q5PQL4 SMR:Q5PQL4 STRING:Q5PQL4
Ensembl:ENSRNOT00000009726 GeneID:311166 KEGG:rno:311166
UCSC:RGD:1307679 InParanoid:Q5PQL4 NextBio:663086
Genevestigator:Q5PQL4 Uniprot:Q5PQL4
Length = 425
Score = 124 (48.7 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 72/314 (22%), Positives = 120/314 (38%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P + G + GK+T R L+N ++ ++ Y++ DVGQ + PG
Sbjct: 115 PRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADV 174
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
++ P Y FG + + Y K + L D + + + + G ++
Sbjct: 175 EEGFSIQAPL-VYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSG-----CVI 228
Query: 158 NTPGWVKGIGYDILVDMLKYITPTHVVKIN---ISFE-KKNLP--AGAFWLDNFEGVDVN 211
NT GWVKG GY LV VV ++ + E K++LP L GV
Sbjct: 229 NTCGWVKGYGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGV--- 285
Query: 212 LIEISSARQDSFNRSVLVQKDARLLRDLRIMAY-FRQCF-PSDLNITI--IKELAQALAA 267
+E R F R +D R+ R Y FR CF P N+ +K
Sbjct: 286 -VE----RSKDFRREC---RDERI----REYFYGFRGCFYPHAFNVKFSDVKIYKVGAPT 333
Query: 268 YPPYQVPISSIKIRHLYCQVPRSEIFYSLNATIVGLAISSDASENLPHC--VGLGIVRGI 325
P +P+ + + VP + + ++ ++ + ENL G +V +
Sbjct: 334 IPDSCLPLGMSQEDNQLKLVPVTP-GRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSV 392
Query: 326 DTLKGLLYVITPVP 339
D + V++P P
Sbjct: 393 DVEHQVFTVLSPAP 406
>FB|FBgn0033842 [details] [associations]
symbol:cbc "crowded by cid" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0022008 "neurogenesis" evidence=IMP] EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0006397 eggNOG:COG5623
GeneTree:ENSGT00390000000344 KO:K14399 OMA:GFSVQAP GO:GO:0000214
GO:GO:0006388 InterPro:IPR010655 Pfam:PF06807 OrthoDB:EOG4VHHNQ
EMBL:AY061187 RefSeq:NP_610876.1 UniGene:Dm.601
ProteinModelPortal:Q7K284 SMR:Q7K284 STRING:Q7K284 PaxDb:Q7K284
PRIDE:Q7K284 EnsemblMetazoa:FBtr0087701 GeneID:36494
KEGG:dme:Dmel_CG5970 UCSC:CG5970-RA CTD:36494 FlyBase:FBgn0033842
InParanoid:Q7K284 PhylomeDB:Q7K284 GenomeRNAi:36494 NextBio:798847
Bgee:Q7K284 Uniprot:Q7K284
Length = 423
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 37/139 (26%), Positives = 57/139 (41%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P+A + G + GK+T R L+N ++ ++ Y D DVGQ G
Sbjct: 110 PVAMVVGPMDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGSIAISGSVATILIERPANV 169
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
KT Y FG S + Y ++ + + + ++S G +I+
Sbjct: 170 EE-GFAKTAPLVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLNSNKRTKSSG-----III 223
Query: 158 NTPGWVKGIGYDILVDMLK 176
NT GWVKG GY L+ K
Sbjct: 224 NTCGWVKGSGYAHLLHAAK 242
>UNIPROTKB|B4HQJ2 [details] [associations]
symbol:cbc "Protein CLP1 homolog" species:7238 "Drosophila
sechellia" [GO:0000214 "tRNA-intron endonuclease complex"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006388 "tRNA splicing, via endonucleolytic cleavage and
ligation" evidence=ISS] GO:GO:0005524 GO:GO:0006397 EMBL:CH480816
KO:K14399 GO:GO:0000214 GO:GO:0006388 InterPro:IPR010655
Pfam:PF06807 OrthoDB:EOG4VHHNQ RefSeq:XP_002033714.1
EnsemblMetazoa:FBtr0203260 GeneID:6609009 KEGG:dse:Dsec_GM20275
FlyBase:FBgn0175158 Uniprot:B4HQJ2
Length = 423
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 37/139 (26%), Positives = 57/139 (41%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P+A + G + GK+T R L+N ++ ++ Y D DVGQ G
Sbjct: 110 PVAMVVGPMDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGSIAISGSVATILIERPANV 169
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
KT Y FG S + Y ++ + + + ++S G +I+
Sbjct: 170 EE-GFAKTAPLVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLNSNKRTKSSG-----III 223
Query: 158 NTPGWVKGIGYDILVDMLK 176
NT GWVKG GY L+ K
Sbjct: 224 NTCGWVKGSGYAHLLHAAK 242
>UNIPROTKB|B4QEE3 [details] [associations]
symbol:cbc "Protein CLP1 homolog" species:7240 "Drosophila
simulans" [GO:0000214 "tRNA-intron endonuclease complex"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006388 "tRNA splicing, via endonucleolytic cleavage and
ligation" evidence=ISS] GO:GO:0005524 GO:GO:0006397 EMBL:CM000362
KO:K14399 GO:GO:0000214 GO:GO:0006388 InterPro:IPR010655
Pfam:PF06807 OrthoDB:EOG4VHHNQ RefSeq:XP_002081348.1
EnsemblMetazoa:FBtr0225667 GeneID:6734325 KEGG:dsi:Dsim_GD25757
FlyBase:FBgn0197038 Uniprot:B4QEE3
Length = 423
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 37/139 (26%), Positives = 57/139 (41%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P+A + G + GK+T R L+N ++ ++ Y D DVGQ G
Sbjct: 110 PVAMVVGPMDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGSIAISGSVATILIERPANV 169
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
KT Y FG S + Y ++ + + + ++S G +I+
Sbjct: 170 EE-GFAKTAPLVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLNSNKRTKSSG-----III 223
Query: 158 NTPGWVKGIGYDILVDMLK 176
NT GWVKG GY L+ K
Sbjct: 224 NTCGWVKGSGYAHLLHAAK 242
>UNIPROTKB|A2VE01 [details] [associations]
symbol:CLP1 "Polyribonucleotide 5'-hydroxyl-kinase Clp1"
species:9913 "Bos taurus" [GO:0030423 "targeting of mRNA for
destruction involved in RNA interference" evidence=ISS] [GO:0006388
"tRNA splicing, via endonucleolytic cleavage and ligation"
evidence=ISS] [GO:0035087 "siRNA loading onto RISC involved in RNA
interference" evidence=ISS] [GO:0051736 "ATP-dependent
polyribonucleotide 5'-hydroxyl-kinase activity" evidence=ISS]
[GO:0051733 "polydeoxyribonucleotide kinase activity" evidence=ISS]
[GO:0000214 "tRNA-intron endonuclease complex" evidence=ISS]
[GO:0046404 "ATP-dependent polydeoxyribonucleotide
5'-hydroxyl-kinase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
GO:GO:0005524 GO:GO:0006397 GO:GO:0035087 GO:GO:0030423
EMBL:BC133499 IPI:IPI00689141 RefSeq:NP_001075182.1
UniGene:Bt.15752 ProteinModelPortal:A2VE01 STRING:A2VE01
Ensembl:ENSBTAT00000008507 GeneID:506507 KEGG:bta:506507 CTD:10978
eggNOG:COG5623 GeneTree:ENSGT00390000000344 HOGENOM:HOG000231935
InParanoid:A2VE01 KO:K14399 OMA:GFSVQAP OrthoDB:EOG4K0QNF
NextBio:20867633 GO:GO:0000214 GO:GO:0046404 GO:GO:0051736
GO:GO:0051733 GO:GO:0006388 InterPro:IPR010655 Pfam:PF06807
Uniprot:A2VE01
Length = 425
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 35/135 (25%), Positives = 57/135 (42%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P + G + GK+T R L+N ++ ++ Y++ DVGQ + PG
Sbjct: 115 PRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADV 174
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
++ P Y FG + + Y K + L D + + + + G ++
Sbjct: 175 EEGFSIQAPL-VYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSG-----CVI 228
Query: 158 NTPGWVKGIGYDILV 172
NT GWVKG GY LV
Sbjct: 229 NTCGWVKGSGYQALV 243
>UNIPROTKB|E2R321 [details] [associations]
symbol:CLP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051736 "ATP-dependent polyribonucleotide
5'-hydroxyl-kinase activity" evidence=IEA] [GO:0051733
"polydeoxyribonucleotide kinase activity" evidence=IEA] [GO:0035087
"siRNA loading onto RISC involved in RNA interference"
evidence=IEA] [GO:0030423 "targeting of mRNA for destruction
involved in RNA interference" evidence=IEA] [GO:0006388 "tRNA
splicing, via endonucleolytic cleavage and ligation" evidence=IEA]
[GO:0000214 "tRNA-intron endonuclease complex" evidence=IEA]
GO:GO:0035087 GO:GO:0030423 CTD:10978 GeneTree:ENSGT00390000000344
KO:K14399 OMA:GFSVQAP GO:GO:0000214 GO:GO:0051736 GO:GO:0051733
GO:GO:0006388 InterPro:IPR010655 Pfam:PF06807 EMBL:AAEX03011434
RefSeq:XP_852672.1 Ensembl:ENSCAFT00000012481 GeneID:610161
KEGG:cfa:610161 NextBio:20895728 Uniprot:E2R321
Length = 425
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 35/135 (25%), Positives = 57/135 (42%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P + G + GK+T R L+N ++ ++ Y++ DVGQ + PG
Sbjct: 115 PRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADV 174
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
++ P Y FG + + Y K + L D + + + + G ++
Sbjct: 175 EEGFSIQAPL-VYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSG-----CVI 228
Query: 158 NTPGWVKGIGYDILV 172
NT GWVKG GY LV
Sbjct: 229 NTCGWVKGSGYQALV 243
>UNIPROTKB|Q92989 [details] [associations]
symbol:CLP1 "Polyribonucleotide 5'-hydroxyl-kinase Clp1"
species:9606 "Homo sapiens" [GO:0046404 "ATP-dependent
polydeoxyribonucleotide 5'-hydroxyl-kinase activity" evidence=IEA]
[GO:0000214 "tRNA-intron endonuclease complex" evidence=IDA]
[GO:0051733 "polydeoxyribonucleotide kinase activity" evidence=IDA]
[GO:0051736 "ATP-dependent polyribonucleotide 5'-hydroxyl-kinase
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=TAS]
[GO:0035087 "siRNA loading onto RISC involved in RNA interference"
evidence=IDA] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
[GO:0006388 "tRNA splicing, via endonucleolytic cleavage and
ligation" evidence=IDA] [GO:0030423 "targeting of mRNA for
destruction involved in RNA interference" evidence=IMP] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006369 "termination of
RNA polymerase II transcription" evidence=TAS] [GO:0006397 "mRNA
processing" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] Reactome:REACT_71
GO:GO:0005524 GO:GO:0005654 EMBL:CH471076 Reactome:REACT_1675
GO:GO:0035087 GO:GO:0030423 GO:GO:0000398 Reactome:REACT_1788
GO:GO:0006369 GO:GO:0031124 CTD:10978 eggNOG:COG5623
HOGENOM:HOG000231935 KO:K14399 OrthoDB:EOG4K0QNF GO:GO:0000214
GO:GO:0046404 GO:GO:0051736 GO:GO:0051733 GO:GO:0006388
InterPro:IPR010655 Pfam:PF06807 EMBL:U73524 EMBL:AK300232
EMBL:AK313007 EMBL:BC000446 IPI:IPI00024381 IPI:IPI00908312
RefSeq:NP_001136069.1 RefSeq:NP_006822.1 UniGene:Hs.523687
ProteinModelPortal:Q92989 SMR:Q92989 IntAct:Q92989 STRING:Q92989
PhosphoSite:Q92989 DMDM:13431366 PaxDb:Q92989 PRIDE:Q92989
DNASU:10978 Ensembl:ENST00000302731 Ensembl:ENST00000525602
Ensembl:ENST00000533682 GeneID:10978 KEGG:hsa:10978 UCSC:uc001nkw.3
UCSC:uc010rjw.2 GeneCards:GC11P057425 HGNC:HGNC:16999 MIM:608757
neXtProt:NX_Q92989 PharmGKB:PA162382477 HOVERGEN:HBG000921
InParanoid:Q92989 PhylomeDB:Q92989 Reactome:REACT_78
GenomeRNAi:10978 NextBio:41710 ArrayExpress:Q92989 Bgee:Q92989
CleanEx:HS_CLP1 Genevestigator:Q92989 GermOnline:ENSG00000172409
Uniprot:Q92989
Length = 425
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 35/135 (25%), Positives = 57/135 (42%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P + G + GK+T R L+N ++ ++ Y++ DVGQ + PG
Sbjct: 115 PRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADV 174
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
++ P Y FG + + Y K + L D + + + + G ++
Sbjct: 175 EEGFSIQAPL-VYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSG-----CVI 228
Query: 158 NTPGWVKGIGYDILV 172
NT GWVKG GY LV
Sbjct: 229 NTCGWVKGSGYQALV 243
>UNIPROTKB|F2Z5N4 [details] [associations]
symbol:CLP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051736 "ATP-dependent polyribonucleotide
5'-hydroxyl-kinase activity" evidence=IEA] [GO:0051733
"polydeoxyribonucleotide kinase activity" evidence=IEA] [GO:0035087
"siRNA loading onto RISC involved in RNA interference"
evidence=IEA] [GO:0030423 "targeting of mRNA for destruction
involved in RNA interference" evidence=IEA] [GO:0006388 "tRNA
splicing, via endonucleolytic cleavage and ligation" evidence=IEA]
[GO:0000214 "tRNA-intron endonuclease complex" evidence=IEA]
GO:GO:0035087 GO:GO:0030423 GeneTree:ENSGT00390000000344 KO:K14399
OMA:GFSVQAP GO:GO:0000214 GO:GO:0051736 GO:GO:0051733 GO:GO:0006388
InterPro:IPR010655 Pfam:PF06807 EMBL:CU914175 RefSeq:XP_003122764.1
UniGene:Ssc.18662 ProteinModelPortal:F2Z5N4
Ensembl:ENSSSCT00000014399 GeneID:100520541 KEGG:ssc:100520541
Uniprot:F2Z5N4
Length = 425
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 35/135 (25%), Positives = 57/135 (42%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P + G + GK+T R L+N ++ ++ Y++ DVGQ + PG
Sbjct: 115 PRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADV 174
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
++ P Y FG + + Y K + L D + + + + G ++
Sbjct: 175 EEGFSIQAPL-VYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSG-----CVI 228
Query: 158 NTPGWVKGIGYDILV 172
NT GWVKG GY LV
Sbjct: 229 NTCGWVKGSGYQALV 243
>UNIPROTKB|Q4R7R3 [details] [associations]
symbol:CLP1 "Polyribonucleotide 5'-hydroxyl-kinase Clp1"
species:9541 "Macaca fascicularis" [GO:0000214 "tRNA-intron
endonuclease complex" evidence=ISS] [GO:0006388 "tRNA splicing, via
endonucleolytic cleavage and ligation" evidence=ISS] [GO:0030423
"targeting of mRNA for destruction involved in RNA interference"
evidence=ISS] [GO:0035087 "siRNA loading onto RISC involved in RNA
interference" evidence=ISS] [GO:0051733 "polydeoxyribonucleotide
kinase activity" evidence=ISS] [GO:0051736 "ATP-dependent
polyribonucleotide 5'-hydroxyl-kinase activity" evidence=ISS]
GO:GO:0005524 GO:GO:0006397 GO:GO:0035087 GO:GO:0030423
GO:GO:0000214 GO:GO:0046404 GO:GO:0051736 GO:GO:0051733
GO:GO:0006388 InterPro:IPR010655 Pfam:PF06807 EMBL:AB168751
ProteinModelPortal:Q4R7R3 SMR:Q4R7R3 PRIDE:Q4R7R3 Uniprot:Q4R7R3
Length = 425
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 35/135 (25%), Positives = 57/135 (42%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P + G + GK+T R L+N ++ ++ Y++ DVGQ + PG
Sbjct: 115 PRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADV 174
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
++ P Y FG + + Y K + L D + + + + G ++
Sbjct: 175 EEGFSIQAPL-VYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSG-----CVI 228
Query: 158 NTPGWVKGIGYDILV 172
NT GWVKG GY LV
Sbjct: 229 NTCGWVKGSGYQALV 243
>UNIPROTKB|B3MGZ0 [details] [associations]
symbol:cbc "Protein CLP1 homolog" species:7217 "Drosophila
ananassae" [GO:0000214 "tRNA-intron endonuclease complex"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006388 "tRNA splicing, via endonucleolytic cleavage and
ligation" evidence=ISS] GO:GO:0005524 GO:GO:0006397 EMBL:CH902619
eggNOG:COG5623 KO:K14399 GO:GO:0000214 GO:GO:0006388
InterPro:IPR010655 Pfam:PF06807 RefSeq:XP_001961086.1 STRING:B3MGZ0
EnsemblMetazoa:FBtr0115882 GeneID:6494046 KEGG:dan:Dana_GF11182
FlyBase:FBgn0088222 InParanoid:B3MGZ0 OrthoDB:EOG4VHHNQ
Uniprot:B3MGZ0
Length = 425
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 36/132 (27%), Positives = 55/132 (41%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPG-FXXXXXXXXXXX 96
P+A + G + GK+T R L+N ++ ++ Y D DVGQ G
Sbjct: 112 PVAMVVGPMDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGAIAISGNVATILIERPASV 171
Query: 97 XXXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLI 156
P KT Y FG S + Y ++ + + + ++S G +I
Sbjct: 172 EDGFP--KTAPLVYHFGHKSPGGNSVLYNSVVSKMAEVTLQSLNSNKRTKSSG-----II 224
Query: 157 VNTPGWVKGIGY 168
+NT GWVKG GY
Sbjct: 225 INTCGWVKGSGY 236
>UNIPROTKB|B4P4H2 [details] [associations]
symbol:cbc "Protein CLP1 homolog" species:7245 "Drosophila
yakuba" [GO:0000214 "tRNA-intron endonuclease complex"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006388 "tRNA splicing, via endonucleolytic cleavage and
ligation" evidence=ISS] GO:GO:0005524 GO:GO:0006397 EMBL:CM000158
eggNOG:COG5623 KO:K14399 GO:GO:0000214 GO:GO:0006388
InterPro:IPR010655 Pfam:PF06807 OrthoDB:EOG4VHHNQ
RefSeq:XP_002090899.1 STRING:B4P4H2 EnsemblMetazoa:FBtr0259877
GeneID:6529944 KEGG:dya:Dyak_GE13359 FlyBase:FBgn0231038
Uniprot:B4P4H2
Length = 423
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 38/139 (27%), Positives = 56/139 (40%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P+A + G + GK+T R L+N ++ ++ Y D DVGQ G
Sbjct: 110 PVAMVVGPMDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGSIAIAGSVATILIERPANV 169
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
KT Y FG S + Y ++ + + ++S G +IV
Sbjct: 170 EE-GFAKTAPLVYHFGHKSPSGNSILYNAVVSKMAEVTLHSLNSNKRTKSSG-----IIV 223
Query: 158 NTPGWVKGIGYDILVDMLK 176
NT GWVKG GY L+ K
Sbjct: 224 NTCGWVKGSGYAHLLHAAK 242
>UNIPROTKB|B4GGT6 [details] [associations]
symbol:cbc "Protein CLP1 homolog" species:7234 "Drosophila
persimilis" [GO:0000214 "tRNA-intron endonuclease complex"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006388 "tRNA splicing, via endonucleolytic cleavage and
ligation" evidence=ISS] GO:GO:0005524 GO:GO:0006397 EMBL:CH479183
KO:K14399 GO:GO:0000214 GO:GO:0006388 InterPro:IPR010655
Pfam:PF06807 OrthoDB:EOG4VHHNQ RefSeq:XP_002017867.1
EnsemblMetazoa:FBtr0182686 GeneID:6592646 KEGG:dpe:Dper_GL17071
FlyBase:FBgn0154675 Uniprot:B4GGT6
Length = 425
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 37/132 (28%), Positives = 55/132 (41%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPG-FXXXXXXXXXXX 96
P+A + G + GK+T R L+N ++ ++ Y D DVGQ G
Sbjct: 112 PVAMVVGPTDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGAIAISGNVATILIERPASV 171
Query: 97 XXXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLI 156
P KT Y FG S + Y ++ + + + ++S G +I
Sbjct: 172 EEGFP--KTAPLVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLNGNKRTKSSG-----II 224
Query: 157 VNTPGWVKGIGY 168
VNT GWVKG GY
Sbjct: 225 VNTCGWVKGHGY 236
>UNIPROTKB|Q28ZT4 [details] [associations]
symbol:cbc "Protein CLP1 homolog" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0000214 "tRNA-intron endonuclease
complex" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006388 "tRNA splicing, via endonucleolytic
cleavage and ligation" evidence=ISS] GO:GO:0005524 GO:GO:0006397
EMBL:CM000071 GenomeReviews:CM000071_GR eggNOG:COG5623 KO:K14399
OMA:GFSVQAP GO:GO:0000214 GO:GO:0006388 InterPro:IPR010655
Pfam:PF06807 OrthoDB:EOG4VHHNQ RefSeq:XP_001360953.1
ProteinModelPortal:Q28ZT4 GeneID:4804382 KEGG:dpo:Dpse_GA19268
FlyBase:FBgn0079265 InParanoid:Q28ZT4 Uniprot:Q28ZT4
Length = 425
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 37/132 (28%), Positives = 55/132 (41%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPG-FXXXXXXXXXXX 96
P+A + G + GK+T R L+N ++ ++ Y D DVGQ G
Sbjct: 112 PVAMVVGPTDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGAIAISGNVATILIERPASV 171
Query: 97 XXXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLI 156
P KT Y FG S + Y ++ + + + ++S G +I
Sbjct: 172 EEGFP--KTAPLVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLNGNKRTKSSG-----II 224
Query: 157 VNTPGWVKGIGY 168
VNT GWVKG GY
Sbjct: 225 VNTCGWVKGHGY 236
>UNIPROTKB|B4JVN0 [details] [associations]
symbol:cbc "Protein CLP1 homolog" species:7222 "Drosophila
grimshawi" [GO:0000214 "tRNA-intron endonuclease complex"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006388 "tRNA splicing, via endonucleolytic cleavage and
ligation" evidence=ISS] GO:GO:0005524 GO:GO:0006397 EMBL:CH916375
eggNOG:COG5623 KO:K14399 OMA:GFSVQAP GO:GO:0000214 GO:GO:0006388
InterPro:IPR010655 Pfam:PF06807 OrthoDB:EOG4VHHNQ
RefSeq:XP_001995426.1 STRING:B4JVN0 EnsemblMetazoa:FBtr0158565
GeneID:6568947 KEGG:dgr:Dgri_GH23151 FlyBase:FBgn0130608
InParanoid:B4JVN0 Uniprot:B4JVN0
Length = 425
Score = 117 (46.2 bits), Expect = 0.00048, P = 0.00048
Identities = 37/135 (27%), Positives = 56/135 (41%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P I G + GK+T R L+N ++ ++ Y D DVGQ + G
Sbjct: 112 PSVLIVGPMDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGAISVAGNVATILIERPASI 171
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
KT Y FG S + Y ++ + + + ++S G +IV
Sbjct: 172 ED-GFAKTAPLVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLDANKRTKSSG-----IIV 225
Query: 158 NTPGWVKGIGYDILV 172
NT GWVKG GY+ L+
Sbjct: 226 NTCGWVKGSGYEHLL 240
>UNIPROTKB|Q753Y3 [details] [associations]
symbol:GRC3 "Polynucleotide 5'-hydroxyl-kinase GRC3"
species:284811 "Ashbya gossypii ATCC 10895" [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0051731 "polynucleotide
5'-hydroxyl-kinase activity" evidence=ISS] GO:GO:0005524
GO:GO:0005730 GO:GO:0006364 EMBL:AE016819 GenomeReviews:AE016819_GR
RefSeq:NP_985736.1 ProteinModelPortal:Q753Y3 STRING:Q753Y3
EnsemblFungi:AAS53560 GeneID:4621994 KEGG:ago:AGOS_AFR189C
eggNOG:COG1341 HOGENOM:HOG000112809 KO:K06947 OrthoDB:EOG4ZPJ45
PhylomeDB:Q753Y3 GO:GO:0051731 Uniprot:Q753Y3
Length = 633
Score = 119 (46.9 bits), Expect = 0.00052, P = 0.00052
Identities = 43/190 (22%), Positives = 74/190 (38%)
Query: 9 ENPSPAIYIPREWSDAADSIAYDSNTSPPPIAFIC-GAKNCGKTTFSRHLVNVLLQRYKK 67
E+ + + + ++W + + S + +C G KN GK+T R L+ L K
Sbjct: 207 EDYARPLILNKDWDNLQAELMIHHMNSEHDMRVMCIGGKNSGKSTLLRLLLQKFLHGNKS 266
Query: 68 -------------VAYLDTDVGQPEFTAPGFXXXXXXXXXXXXXXIPCLKTPKRCYFFGD 114
V YLD D GQPE++AP + +
Sbjct: 267 TTKATGVSHEADVVNYLDMDPGQPEYSAPDSISWSKLTSETLSLGQHLAQGHREMIQTTY 326
Query: 115 VSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIVNTPGWVKGIGYDILVDM 174
+ S T Y+T + ++ ++ E G+ L+ N PGW+KG G I+
Sbjct: 327 IGSSTPQTWPEMYLTAME-------HIIHKWEMEGQMNTALL-NLPGWIKGFGITIINKA 378
Query: 175 LKYITPTHVV 184
++ PTH++
Sbjct: 379 MELFKPTHII 388
>UNIPROTKB|B3NRK6 [details] [associations]
symbol:cbc "Protein CLP1 homolog" species:7220 "Drosophila
erecta" [GO:0000214 "tRNA-intron endonuclease complex"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006388 "tRNA splicing, via endonucleolytic cleavage and
ligation" evidence=ISS] GO:GO:0005524 GO:GO:0006397 EMBL:CH954179
KO:K14399 GO:GO:0000214 GO:GO:0006388 InterPro:IPR010655
Pfam:PF06807 OrthoDB:EOG4VHHNQ RefSeq:XP_001975758.1
EnsemblMetazoa:FBtr0142542 GeneID:6549640 KEGG:der:Dere_GG22488
FlyBase:FBgn0114659 Uniprot:B3NRK6
Length = 423
Score = 116 (45.9 bits), Expect = 0.00062, P = 0.00062
Identities = 37/139 (26%), Positives = 56/139 (40%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P+A + G + GK+T R L+N ++ ++ Y D DVGQ G
Sbjct: 110 PVAMVVGPMDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGSIAISGNVATILIERPANV 169
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
KT Y FG S + Y ++ + + ++S G +I+
Sbjct: 170 EE-GFSKTAPLVYHFGHKSPGANSILYNAVVSKMAEVTLHSLNSNKRTKSSG-----III 223
Query: 158 NTPGWVKGIGYDILVDMLK 176
NT GWVKG GY L+ K
Sbjct: 224 NTCGWVKGSGYAHLLHAAK 242
>UNIPROTKB|Q66JK4 [details] [associations]
symbol:clp1 "Polyribonucleotide 5'-hydroxyl-kinase Clp1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000214
"tRNA-intron endonuclease complex" evidence=ISS] [GO:0006388 "tRNA
splicing, via endonucleolytic cleavage and ligation" evidence=ISS]
[GO:0030423 "targeting of mRNA for destruction involved in RNA
interference" evidence=ISS] [GO:0035087 "siRNA loading onto RISC
involved in RNA interference" evidence=ISS] [GO:0051733
"polydeoxyribonucleotide kinase activity" evidence=ISS] [GO:0051736
"ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity"
evidence=ISS] GO:GO:0005524 GO:GO:0006397 GO:GO:0035087
GO:GO:0030423 CTD:10978 eggNOG:COG5623 GeneTree:ENSGT00390000000344
HOGENOM:HOG000231935 KO:K14399 OrthoDB:EOG4K0QNF GO:GO:0000214
GO:GO:0046404 GO:GO:0051736 GO:GO:0051733 GO:GO:0006388
InterPro:IPR010655 Pfam:PF06807 EMBL:CR848531 EMBL:BC080880
RefSeq:NP_001008002.1 UniGene:Str.3967 ProteinModelPortal:Q66JK4
STRING:Q66JK4 Ensembl:ENSXETT00000015427 GeneID:493364
KEGG:xtr:493364 Xenbase:XB-GENE-1008970 InParanoid:Q66JK4
OMA:GENQWER Bgee:Q66JK4 Uniprot:Q66JK4
Length = 437
Score = 111 (44.1 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 36/137 (26%), Positives = 58/137 (42%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P + G + GK+T R L+N ++R ++ ++ DVGQ + PG
Sbjct: 125 PRVLVAGPSDVGKSTLCRLLLNYAVRRGRRPTLVELDVGQGSVSVPGTVGALCVERPADV 184
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFN-ESESPGRTELP-L 155
+ P Y FG + + Y K + L ++FN +S R +
Sbjct: 185 EEGFSAQAPL-VYHFGSTTPGTNIKLYNKLTSRLA-------HVFNLRCDSNRRASVSGC 236
Query: 156 IVNTPGWVKGIGYDILV 172
++NT GWVKG GY L+
Sbjct: 237 LINTCGWVKGSGYQALI 253
Score = 46 (21.3 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 318 GLGIVRGIDTLKGLLYVITPVP 339
G ++ G+DT + L V++P P
Sbjct: 397 GFIVITGVDTERQTLTVLSPAP 418
>UNIPROTKB|B4MCL6 [details] [associations]
symbol:cbc "Protein CLP1 homolog" species:7244 "Drosophila
virilis" [GO:0000214 "tRNA-intron endonuclease complex"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006388 "tRNA splicing, via endonucleolytic cleavage and
ligation" evidence=ISS] GO:GO:0005524 GO:GO:0006397 eggNOG:COG5623
KO:K14399 OMA:GFSVQAP GO:GO:0000214 GO:GO:0006388
InterPro:IPR010655 Pfam:PF06807 OrthoDB:EOG4VHHNQ EMBL:CH940659
RefSeq:XP_002058869.1 STRING:B4MCL6 EnsemblMetazoa:FBtr0235606
GeneID:6635342 KEGG:dvi:Dvir_GJ19681 FlyBase:FBgn0206823
InParanoid:B4MCL6 Uniprot:B4MCL6
Length = 425
Score = 115 (45.5 bits), Expect = 0.00081, P = 0.00081
Identities = 36/131 (27%), Positives = 54/131 (41%)
Query: 38 PIAFICGAKNCGKTTFSRHLVNVLLQRYKKVAYLDTDVGQPEFTAPGFXXXXXXXXXXXX 97
P+ I G + GK+T R L+N ++ ++ Y D DVGQ + G
Sbjct: 112 PVVLIVGPMDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGAISISGNVATILIERPASV 171
Query: 98 XXIPCLKTPKRCYFFGDVSSKRDPTAYLKYITTLYDYYRKEYYMFNESESPGRTELPLIV 157
KT Y FG S + Y ++ + + + ++S G +IV
Sbjct: 172 EE-GFTKTAPLVYHFGHKSPGANNVLYNAVVSKMAEVTLQSLDANKRTKSSG-----IIV 225
Query: 158 NTPGWVKGIGY 168
NT GWVKG GY
Sbjct: 226 NTCGWVKGSGY 236
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.139 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 379 365 0.00084 117 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 55
No. of states in DFA: 614 (65 KB)
Total size of DFA: 240 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.16u 0.12s 27.28t Elapsed: 00:00:01
Total cpu time: 27.17u 0.12s 27.29t Elapsed: 00:00:01
Start: Fri May 10 07:53:31 2013 End: Fri May 10 07:53:32 2013