Query 017025
Match_columns 379
No_of_seqs 248 out of 1397
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 04:57:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017025.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017025hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03017 trehalose-phosphatase 100.0 2.1E-73 4.5E-78 559.8 36.9 361 1-374 1-364 (366)
2 PLN02580 trehalose-phosphatase 100.0 1.5E-69 3.3E-74 536.7 34.7 326 43-375 41-383 (384)
3 PLN02151 trehalose-phosphatase 100.0 3.2E-67 6.9E-72 514.6 33.4 342 18-377 11-353 (354)
4 PRK10187 trehalose-6-phosphate 100.0 1.6E-37 3.4E-42 297.4 29.6 232 122-373 14-248 (266)
5 PF02358 Trehalose_PPase: Treh 100.0 3.2E-38 6.8E-43 296.5 17.0 225 126-359 1-235 (235)
6 TIGR00685 T6PP trehalose-phosp 100.0 4.1E-36 8.9E-41 283.9 27.5 236 120-369 1-243 (244)
7 COG1877 OtsB Trehalose-6-phosp 100.0 1.9E-35 4.1E-40 280.6 25.3 245 112-372 7-255 (266)
8 PRK14501 putative bifunctional 100.0 6.5E-33 1.4E-37 298.8 28.7 240 110-370 479-725 (726)
9 PLN02205 alpha,alpha-trehalose 100.0 9.7E-33 2.1E-37 299.4 27.5 242 112-372 585-848 (854)
10 PLN03063 alpha,alpha-trehalose 100.0 4.7E-32 1E-36 293.4 29.2 256 105-372 490-787 (797)
11 PLN03064 alpha,alpha-trehalose 100.0 1.9E-31 4.2E-36 288.8 29.3 257 104-373 573-931 (934)
12 COG0561 Cof Predicted hydrolas 100.0 1.6E-29 3.5E-34 240.6 20.6 223 121-370 2-262 (264)
13 PRK10976 putative hydrolase; P 100.0 2.8E-29 6.2E-34 239.0 21.5 223 123-369 3-264 (266)
14 PRK10513 sugar phosphate phosp 100.0 3.2E-29 6.8E-34 239.0 21.2 224 122-369 3-268 (270)
15 PRK15126 thiamin pyrimidine py 100.0 5.5E-29 1.2E-33 238.1 19.1 224 123-370 3-263 (272)
16 PRK01158 phosphoglycolate phos 100.0 1.4E-28 3.1E-33 228.8 20.5 214 122-369 3-229 (230)
17 PRK03669 mannosyl-3-phosphogly 100.0 2E-28 4.4E-33 234.6 21.5 226 121-371 6-270 (271)
18 PLN02887 hydrolase family prot 100.0 3.6E-27 7.8E-32 246.3 21.9 232 114-369 300-579 (580)
19 TIGR01484 HAD-SF-IIB HAD-super 100.0 1.1E-27 2.4E-32 219.2 15.1 197 124-342 1-204 (204)
20 PF08282 Hydrolase_3: haloacid 99.9 4E-27 8.6E-32 218.5 17.6 214 125-365 1-254 (254)
21 PRK10530 pyridoxal phosphate ( 99.9 1.9E-26 4.2E-31 219.5 20.2 223 122-369 3-271 (272)
22 TIGR01485 SPP_plant-cyano sucr 99.9 3.5E-26 7.7E-31 216.4 18.1 228 122-368 1-246 (249)
23 TIGR01482 SPP-subfamily Sucros 99.9 2.4E-26 5.3E-31 212.9 16.3 211 125-368 1-224 (225)
24 TIGR01486 HAD-SF-IIB-MPGP mann 99.9 1.7E-25 3.6E-30 212.5 21.3 219 124-369 1-256 (256)
25 TIGR01487 SPP-like sucrose-pho 99.9 7.3E-26 1.6E-30 209.3 17.5 207 123-365 2-215 (215)
26 TIGR02471 sucr_syn_bact_C sucr 99.9 6.6E-26 1.4E-30 212.6 17.2 217 124-368 1-234 (236)
27 TIGR00099 Cof-subfamily Cof su 99.9 1E-25 2.2E-30 213.6 18.1 218 124-365 1-256 (256)
28 PRK00192 mannosyl-3-phosphogly 99.9 5.2E-24 1.1E-28 204.3 22.8 228 122-370 4-271 (273)
29 TIGR02463 MPGP_rel mannosyl-3- 99.9 7.9E-24 1.7E-28 196.2 16.8 193 124-342 1-220 (221)
30 PLN02382 probable sucrose-phos 99.9 8.8E-24 1.9E-28 214.0 18.2 233 119-372 6-263 (413)
31 PTZ00174 phosphomannomutase; P 99.9 8.6E-23 1.9E-27 193.3 19.7 202 120-345 3-233 (247)
32 PLN02423 phosphomannomutase 99.9 4.4E-22 9.6E-27 188.5 21.6 211 119-369 4-244 (245)
33 KOG1050 Trehalose-6-phosphate 99.9 1.1E-21 2.4E-26 208.4 22.9 226 112-366 492-731 (732)
34 PF05116 S6PP: Sucrose-6F-phos 99.9 2.3E-22 5.1E-27 190.6 12.5 218 122-367 2-244 (247)
35 PRK14502 bifunctional mannosyl 99.9 1.3E-20 2.9E-25 197.3 24.8 234 119-369 413-690 (694)
36 TIGR02461 osmo_MPG_phos mannos 99.9 4.4E-21 9.6E-26 179.5 14.3 197 124-343 1-225 (225)
37 PRK12702 mannosyl-3-phosphogly 99.8 3.7E-20 7.9E-25 177.4 15.9 200 123-345 2-254 (302)
38 KOG1050 Trehalose-6-phosphate 99.8 4.6E-23 1E-27 218.9 -20.1 307 66-375 128-468 (732)
39 COG3769 Predicted hydrolase (H 99.6 9.3E-15 2E-19 133.2 15.8 203 121-346 6-238 (274)
40 KOG3189 Phosphomannomutase [Li 99.4 4.9E-12 1.1E-16 113.8 15.8 214 119-370 8-251 (252)
41 PF03332 PMM: Eukaryotic phosp 99.3 6.9E-12 1.5E-16 115.5 10.1 189 149-370 1-220 (220)
42 TIGR02468 sucrsPsyn_pln sucros 99.3 1E-10 2.2E-15 128.8 16.1 188 122-329 770-992 (1050)
43 TIGR01670 YrbI-phosphatas 3-de 99.2 1.2E-10 2.7E-15 102.6 9.1 72 293-372 76-152 (154)
44 PRK09484 3-deoxy-D-manno-octul 99.1 4.3E-10 9.3E-15 102.0 8.0 56 293-356 96-153 (183)
45 TIGR02726 phenyl_P_delta pheny 99.0 8.7E-10 1.9E-14 98.9 8.6 70 293-370 82-156 (169)
46 PRK11133 serB phosphoserine ph 98.9 8.1E-10 1.8E-14 108.8 4.4 66 292-366 247-316 (322)
47 cd01427 HAD_like Haloacid deha 98.9 9.6E-09 2.1E-13 85.4 8.2 56 124-179 1-60 (139)
48 smart00775 LNS2 LNS2 domain. T 98.6 1.3E-07 2.9E-12 83.8 6.6 72 124-195 1-90 (157)
49 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.3 9.9E-06 2.1E-10 77.0 12.8 65 123-193 2-75 (249)
50 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.2 6.7E-05 1.5E-09 71.6 17.0 64 294-365 181-254 (257)
51 COG1778 Low specificity phosph 98.2 5.3E-07 1.1E-11 78.9 2.2 71 292-370 82-157 (170)
52 TIGR01684 viral_ppase viral ph 98.1 5.5E-06 1.2E-10 80.1 7.3 73 119-194 123-201 (301)
53 TIGR01689 EcbF-BcbF capsule bi 98.1 4.5E-06 9.7E-11 71.4 5.6 52 123-174 2-55 (126)
54 PHA03398 viral phosphatase sup 97.8 4.8E-05 1E-09 73.7 6.8 72 119-195 125-204 (303)
55 PRK06769 hypothetical protein; 97.7 0.00025 5.4E-09 63.7 9.7 64 294-365 95-171 (173)
56 PRK08942 D,D-heptose 1,7-bisph 97.6 0.00061 1.3E-08 61.2 11.0 64 295-366 106-177 (181)
57 PRK10826 2-deoxyglucose-6-phos 97.5 0.00091 2E-08 61.8 10.4 62 293-362 149-216 (222)
58 TIGR01672 AphA HAD superfamily 97.4 0.00038 8.2E-09 65.9 7.5 59 110-168 50-139 (237)
59 PRK10671 copA copper exporting 97.4 0.00092 2E-08 74.1 11.1 62 293-366 700-765 (834)
60 COG0560 SerB Phosphoserine pho 97.3 0.00033 7.1E-09 65.2 5.4 47 292-346 143-189 (212)
61 TIGR01662 HAD-SF-IIIA HAD-supe 97.3 0.00028 6.2E-09 59.8 4.1 56 123-178 1-68 (132)
62 TIGR01681 HAD-SF-IIIC HAD-supe 97.3 0.00044 9.6E-09 58.9 5.1 55 123-177 1-64 (128)
63 TIGR01525 ATPase-IB_hvy heavy 97.1 0.0026 5.6E-08 67.4 10.3 57 119-177 361-419 (556)
64 TIGR01664 DNA-3'-Pase DNA 3'-p 97.1 0.00094 2E-08 59.6 5.5 50 121-170 12-69 (166)
65 PRK10444 UMP phosphatase; Prov 97.0 0.00066 1.4E-08 64.6 4.2 48 123-176 2-50 (248)
66 TIGR01452 PGP_euk phosphoglyco 96.8 0.0011 2.5E-08 63.8 4.4 43 123-171 3-46 (279)
67 TIGR00338 serB phosphoserine p 96.8 0.0008 1.7E-08 61.9 2.8 64 293-364 152-218 (219)
68 PLN02645 phosphoglycolate phos 96.8 0.0013 2.8E-08 64.6 4.0 65 294-366 232-308 (311)
69 PRK11009 aphA acid phosphatase 96.7 0.0034 7.4E-08 59.4 6.2 26 110-135 50-76 (237)
70 TIGR01491 HAD-SF-IB-PSPlk HAD- 96.6 0.0024 5.2E-08 57.5 4.4 46 293-346 147-192 (201)
71 TIGR01533 lipo_e_P4 5'-nucleot 96.6 0.0028 6.2E-08 61.0 4.7 79 95-173 47-148 (266)
72 TIGR00213 GmhB_yaeD D,D-heptos 96.5 0.0021 4.5E-08 57.6 3.3 61 294-362 108-175 (176)
73 PRK13222 phosphoglycolate phos 96.4 0.0074 1.6E-07 55.4 6.5 67 293-367 150-223 (226)
74 PF06437 ISN1: IMP-specific 5' 96.3 0.32 6.9E-06 48.8 17.3 189 120-321 145-378 (408)
75 TIGR01488 HAD-SF-IB Haloacid D 96.3 0.0026 5.7E-08 56.1 2.6 40 287-330 137-176 (177)
76 TIGR01490 HAD-SF-IB-hyp1 HAD-s 96.2 0.0052 1.1E-07 55.6 4.2 46 291-344 153-198 (202)
77 TIGR01511 ATPase-IB1_Cu copper 96.1 0.019 4.1E-07 61.0 8.5 67 285-366 449-519 (562)
78 PLN02954 phosphoserine phospha 96.0 0.013 2.8E-07 54.0 5.9 67 291-365 153-223 (224)
79 TIGR01668 YqeG_hyp_ppase HAD s 96.0 0.018 3.8E-07 51.5 6.6 54 120-177 23-78 (170)
80 PHA02530 pseT polynucleotide k 96.0 0.016 3.5E-07 56.0 6.8 59 120-178 156-222 (300)
81 PRK13582 thrH phosphoserine ph 96.0 0.0075 1.6E-07 54.7 4.2 52 314-370 146-200 (205)
82 smart00577 CPDc catalytic doma 96.0 0.012 2.6E-07 51.3 5.1 58 121-178 1-79 (148)
83 COG1778 Low specificity phosph 96.0 0.0098 2.1E-07 52.5 4.4 58 121-178 7-70 (170)
84 TIGR01512 ATPase-IB2_Cd heavy 95.9 0.011 2.4E-07 62.3 5.5 67 285-366 408-479 (536)
85 TIGR01656 Histidinol-ppas hist 95.8 0.0095 2.1E-07 51.7 3.7 47 124-170 2-54 (147)
86 PRK13225 phosphoglycolate phos 95.8 0.025 5.4E-07 54.6 6.8 71 293-370 196-272 (273)
87 TIGR01460 HAD-SF-IIA Haloacid 95.7 0.012 2.7E-07 55.3 4.5 46 125-176 1-50 (236)
88 TIGR01116 ATPase-IIA1_Ca sarco 95.7 0.015 3.3E-07 65.2 5.9 65 285-364 613-681 (917)
89 TIGR01454 AHBA_synth_RP 3-amin 95.7 0.021 4.6E-07 51.9 5.8 66 293-366 132-204 (205)
90 TIGR01261 hisB_Nterm histidino 95.7 0.0095 2.1E-07 52.9 3.3 35 294-331 105-139 (161)
91 PF08645 PNK3P: Polynucleotide 95.6 0.0087 1.9E-07 53.1 2.7 44 123-166 1-52 (159)
92 TIGR01497 kdpB K+-transporting 95.6 0.014 3.1E-07 63.1 4.8 67 284-365 490-560 (675)
93 COG4030 Uncharacterized protei 95.6 0.066 1.4E-06 50.1 8.4 46 292-342 190-235 (315)
94 TIGR01449 PGP_bact 2-phosphogl 95.5 0.022 4.8E-07 51.8 5.2 63 294-364 143-212 (213)
95 PRK13288 pyrophosphatase PpaX; 95.5 0.052 1.1E-06 49.7 7.6 67 293-367 139-212 (214)
96 TIGR02137 HSK-PSP phosphoserin 95.5 0.024 5.3E-07 52.2 5.3 65 291-367 130-197 (203)
97 PRK13223 phosphoglycolate phos 95.4 0.024 5.2E-07 54.5 5.5 68 291-366 156-230 (272)
98 PF13344 Hydrolase_6: Haloacid 95.4 0.014 3.1E-07 47.7 3.3 40 125-170 1-41 (101)
99 TIGR01663 PNK-3'Pase polynucle 95.4 0.027 5.7E-07 59.3 6.1 74 97-170 139-224 (526)
100 PRK13226 phosphoglycolate phos 95.4 0.033 7.2E-07 51.9 6.0 65 294-366 153-225 (229)
101 PF09419 PGP_phosphatase: Mito 95.3 0.034 7.4E-07 49.9 5.6 44 119-166 38-84 (168)
102 TIGR01652 ATPase-Plipid phosph 95.3 0.1 2.2E-06 59.6 10.7 62 283-358 748-812 (1057)
103 PRK05446 imidazole glycerol-ph 95.0 0.028 6E-07 56.4 4.5 48 121-168 1-55 (354)
104 PF08235 LNS2: LNS2 (Lipin/Ned 95.0 0.034 7.4E-07 49.3 4.4 51 124-174 1-58 (157)
105 TIGR01675 plant-AP plant acid 94.9 0.039 8.4E-07 52.0 5.0 54 119-172 74-149 (229)
106 PRK09552 mtnX 2-hydroxy-3-keto 94.9 0.032 6.9E-07 51.6 4.3 68 292-371 147-218 (219)
107 COG0546 Gph Predicted phosphat 94.9 0.072 1.6E-06 49.4 6.7 68 294-366 147-218 (220)
108 COG4087 Soluble P-type ATPase 94.9 0.038 8.2E-07 47.5 4.2 63 293-367 81-148 (152)
109 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.8 0.04 8.8E-07 51.8 4.8 45 122-172 8-53 (242)
110 TIGR01657 P-ATPase-V P-type AT 94.7 0.25 5.4E-06 56.5 11.8 66 283-363 782-849 (1054)
111 TIGR01544 HAD-SF-IE haloacid d 94.6 0.16 3.5E-06 49.2 8.4 57 119-175 19-88 (277)
112 PRK13582 thrH phosphoserine ph 94.6 0.048 1E-06 49.4 4.6 32 147-178 71-102 (205)
113 PF03031 NIF: NLI interacting 94.5 0.041 8.8E-07 48.1 3.8 56 123-178 1-70 (159)
114 PF13242 Hydrolase_like: HAD-h 94.5 0.092 2E-06 40.2 5.3 58 296-360 8-74 (75)
115 COG2179 Predicted hydrolase of 94.4 0.13 2.7E-06 46.0 6.7 59 120-182 26-85 (175)
116 COG2217 ZntA Cation transport 94.4 0.057 1.2E-06 58.8 5.3 69 283-366 580-652 (713)
117 TIGR01685 MDP-1 magnesium-depe 94.4 0.074 1.6E-06 48.0 5.3 58 122-179 2-82 (174)
118 PF06888 Put_Phosphatase: Puta 94.4 0.046 9.9E-07 51.7 4.0 78 288-369 146-234 (234)
119 PRK11033 zntA zinc/cadmium/mer 94.3 0.05 1.1E-06 59.7 4.7 66 284-365 611-680 (741)
120 PLN02954 phosphoserine phospha 94.3 0.076 1.6E-06 48.8 5.3 34 145-178 85-119 (224)
121 TIGR00338 serB phosphoserine p 93.9 0.098 2.1E-06 47.9 5.3 33 145-177 86-119 (219)
122 PLN03190 aminophospholipid tra 93.8 0.75 1.6E-05 53.1 13.1 69 285-370 853-923 (1178)
123 PRK13478 phosphonoacetaldehyde 93.7 0.17 3.7E-06 48.2 6.7 69 294-370 160-259 (267)
124 TIGR01491 HAD-SF-IB-PSPlk HAD- 93.7 0.11 2.5E-06 46.5 5.1 31 148-178 84-115 (201)
125 PRK09552 mtnX 2-hydroxy-3-keto 93.6 0.068 1.5E-06 49.4 3.6 15 122-136 3-17 (219)
126 PRK08238 hypothetical protein; 93.6 0.16 3.6E-06 52.9 6.7 47 144-190 72-121 (479)
127 TIGR02250 FCP1_euk FCP1-like p 93.5 0.15 3.3E-06 45.1 5.5 60 119-178 3-92 (156)
128 PTZ00445 p36-lilke protein; Pr 93.4 0.15 3.4E-06 47.3 5.5 59 112-170 32-102 (219)
129 TIGR01489 DKMTPPase-SF 2,3-dik 93.4 0.16 3.4E-06 45.0 5.4 37 288-331 145-181 (188)
130 TIGR03333 salvage_mtnX 2-hydro 93.2 0.12 2.7E-06 47.5 4.7 66 292-369 143-212 (214)
131 TIGR01488 HAD-SF-IB Haloacid D 93.2 0.078 1.7E-06 46.6 3.2 33 146-178 75-108 (177)
132 TIGR01686 FkbH FkbH-like domai 93.2 0.17 3.8E-06 49.7 5.9 57 122-178 3-66 (320)
133 TIGR02245 HAD_IIID1 HAD-superf 93.1 0.13 2.9E-06 47.2 4.6 59 119-177 18-78 (195)
134 PRK01122 potassium-transportin 93.0 0.13 2.7E-06 55.9 5.1 68 283-365 488-559 (679)
135 TIGR01522 ATPase-IIA2_Ca golgi 92.9 0.19 4.1E-06 56.4 6.4 66 285-365 600-670 (884)
136 TIGR01456 CECR5 HAD-superfamil 92.9 0.19 4.1E-06 49.6 5.6 48 313-365 264-320 (321)
137 PRK14010 potassium-transportin 92.7 0.12 2.6E-06 56.0 4.4 68 283-365 484-555 (673)
138 TIGR02137 HSK-PSP phosphoserin 92.7 0.14 3.1E-06 47.1 4.3 35 144-178 68-102 (203)
139 COG0647 NagD Predicted sugar p 92.7 0.12 2.6E-06 49.8 3.9 50 121-176 7-60 (269)
140 COG0560 SerB Phosphoserine pho 92.6 0.17 3.7E-06 47.0 4.7 35 143-177 76-111 (212)
141 PF12689 Acid_PPase: Acid Phos 92.6 1.1 2.4E-05 40.3 9.7 38 279-322 97-134 (169)
142 PF12710 HAD: haloacid dehalog 92.6 0.11 2.4E-06 46.2 3.3 33 293-329 157-192 (192)
143 TIGR01524 ATPase-IIIB_Mg magne 92.6 0.22 4.8E-06 55.7 6.3 59 283-356 583-643 (867)
144 KOG0210 P-type ATPase [Inorgan 92.5 0.11 2.3E-06 55.7 3.4 64 293-366 768-833 (1051)
145 TIGR02251 HIF-SF_euk Dullard-l 92.5 0.23 5.1E-06 44.0 5.2 57 122-178 1-76 (162)
146 PF03767 Acid_phosphat_B: HAD 92.4 0.033 7.2E-07 52.4 -0.3 52 120-171 70-143 (229)
147 TIGR03333 salvage_mtnX 2-hydro 92.0 0.17 3.7E-06 46.5 4.0 33 145-177 71-104 (214)
148 PRK10517 magnesium-transportin 92.0 0.42 9.2E-06 53.7 7.6 61 282-357 617-679 (902)
149 TIGR01523 ATPase-IID_K-Na pota 91.9 0.21 4.5E-06 57.1 5.2 65 284-363 727-796 (1053)
150 TIGR01422 phosphonatase phosph 91.9 0.34 7.4E-06 45.6 5.9 64 294-365 158-252 (253)
151 TIGR02254 YjjG/YfnB HAD superf 91.9 0.39 8.4E-06 43.8 6.1 64 294-365 154-224 (224)
152 PF00702 Hydrolase: haloacid d 91.7 0.15 3.2E-06 46.0 3.1 33 296-331 182-214 (215)
153 TIGR03351 PhnX-like phosphonat 91.7 0.34 7.4E-06 44.3 5.5 64 294-365 147-219 (220)
154 PRK15122 magnesium-transportin 91.7 0.3 6.6E-06 54.9 6.1 60 282-356 617-678 (903)
155 TIGR01106 ATPase-IIC_X-K sodiu 91.5 0.28 6.1E-06 55.7 5.6 59 284-357 665-726 (997)
156 TIGR01647 ATPase-IIIA_H plasma 91.4 0.35 7.5E-06 53.4 6.0 61 282-357 514-576 (755)
157 PLN02575 haloacid dehalogenase 91.2 0.55 1.2E-05 47.6 6.8 73 294-373 274-350 (381)
158 TIGR01680 Veg_Stor_Prot vegeta 91.1 0.31 6.8E-06 47.0 4.7 52 121-172 100-174 (275)
159 PRK09449 dUMP phosphatase; Pro 91.1 0.76 1.7E-05 42.1 7.2 66 294-366 152-223 (224)
160 PRK11587 putative phosphatase; 91.1 0.48 1E-05 43.5 5.9 60 294-361 140-203 (218)
161 COG0241 HisB Histidinol phosph 90.7 0.22 4.8E-06 45.2 3.1 45 122-166 5-54 (181)
162 COG4359 Uncharacterized conser 90.6 0.52 1.1E-05 42.9 5.3 37 287-331 142-178 (220)
163 TIGR02253 CTE7 HAD superfamily 90.4 0.51 1.1E-05 43.0 5.4 60 294-361 152-220 (221)
164 TIGR01489 DKMTPPase-SF 2,3-dik 90.3 0.31 6.8E-06 43.0 3.8 15 122-136 1-15 (188)
165 TIGR01517 ATPase-IIB_Ca plasma 90.3 0.37 7.9E-06 54.5 5.1 60 283-357 649-711 (941)
166 PRK13225 phosphoglycolate phos 90.1 0.46 9.9E-06 45.8 5.0 31 147-177 145-176 (273)
167 PRK14988 GMP/IMP nucleotidase; 89.9 0.52 1.1E-05 43.8 5.0 68 294-369 151-222 (224)
168 PRK11590 hypothetical protein; 89.9 0.38 8.2E-06 44.3 4.0 44 291-345 161-204 (211)
169 PLN02779 haloacid dehalogenase 89.5 0.99 2.1E-05 43.7 6.8 60 294-361 204-268 (286)
170 PLN03243 haloacid dehalogenase 89.2 1 2.2E-05 43.1 6.6 65 294-366 167-235 (260)
171 TIGR01545 YfhB_g-proteo haloac 88.7 0.49 1.1E-05 43.7 3.9 43 291-344 160-202 (210)
172 PRK10725 fructose-1-P/6-phosph 88.6 0.29 6.4E-06 43.5 2.3 36 293-331 143-178 (188)
173 TIGR00213 GmhB_yaeD D,D-heptos 88.5 0.73 1.6E-05 41.0 4.8 48 123-170 2-53 (176)
174 PLN02770 haloacid dehalogenase 87.3 1.4 3E-05 41.5 6.1 60 293-360 165-230 (248)
175 PRK06698 bifunctional 5'-methy 87.2 1.4 3E-05 45.5 6.5 65 294-368 387-456 (459)
176 PRK11590 hypothetical protein; 86.9 0.38 8.3E-06 44.2 2.0 15 121-135 5-19 (211)
177 PLN02645 phosphoglycolate phos 86.7 1.9 4.2E-05 42.2 6.9 47 122-174 28-75 (311)
178 PRK11587 putative phosphatase; 86.6 0.37 8E-06 44.3 1.7 29 122-159 3-31 (218)
179 PRK13288 pyrophosphatase PpaX; 86.5 0.42 9.2E-06 43.6 2.0 49 296-346 110-165 (214)
180 TIGR02253 CTE7 HAD superfamily 86.5 0.93 2E-05 41.3 4.3 14 123-136 3-16 (221)
181 COG0474 MgtA Cation transport 86.4 0.52 1.1E-05 53.1 3.0 61 282-357 618-681 (917)
182 TIGR02252 DREG-2 REG-2-like, H 86.4 0.45 9.7E-06 43.0 2.1 34 295-331 163-197 (203)
183 TIGR01548 HAD-SF-IA-hyp1 haloa 86.3 0.37 8E-06 43.5 1.5 32 294-328 163-194 (197)
184 KOG1615 Phosphoserine phosphat 85.8 0.12 2.7E-06 47.2 -1.8 59 291-355 157-215 (227)
185 TIGR02009 PGMB-YQAB-SF beta-ph 85.1 0.81 1.8E-05 40.3 3.1 35 294-331 144-178 (185)
186 TIGR01993 Pyr-5-nucltdase pyri 84.8 0.83 1.8E-05 40.6 3.0 35 294-331 143-177 (184)
187 PRK10748 flavin mononucleotide 84.7 0.66 1.4E-05 43.4 2.4 64 294-365 165-238 (238)
188 PLN02770 haloacid dehalogenase 84.7 0.56 1.2E-05 44.3 1.9 30 121-159 21-50 (248)
189 TIGR01662 HAD-SF-IIIA HAD-supe 84.2 1.5 3.3E-05 36.7 4.3 36 293-331 86-123 (132)
190 COG3700 AphA Acid phosphatase 84.2 3.4 7.4E-05 37.6 6.5 73 104-176 44-147 (237)
191 TIGR01990 bPGM beta-phosphoglu 84.0 0.87 1.9E-05 40.2 2.8 36 293-331 142-177 (185)
192 COG1011 Predicted hydrolase (H 83.5 3.9 8.6E-05 37.2 7.1 65 295-367 157-228 (229)
193 TIGR01493 HAD-SF-IA-v2 Haloaci 83.4 0.84 1.8E-05 40.0 2.4 31 295-328 142-172 (175)
194 PHA02597 30.2 hypothetical pro 83.3 0.58 1.2E-05 42.1 1.3 60 294-362 132-195 (197)
195 TIGR03351 PhnX-like phosphonat 83.1 0.76 1.6E-05 42.0 2.1 28 123-159 2-29 (220)
196 KOG0207 Cation transport ATPas 82.9 2 4.3E-05 47.6 5.4 68 282-364 765-836 (951)
197 TIGR02254 YjjG/YfnB HAD superf 81.6 0.89 1.9E-05 41.3 2.0 50 296-346 124-180 (224)
198 PF05152 DUF705: Protein of un 81.4 6.5 0.00014 38.2 7.7 79 95-176 96-175 (297)
199 PRK13223 phosphoglycolate phos 81.4 1.2 2.7E-05 42.6 2.9 29 122-159 13-41 (272)
200 TIGR01422 phosphonatase phosph 81.2 0.89 1.9E-05 42.7 1.8 50 296-346 127-184 (253)
201 PRK14988 GMP/IMP nucleotidase; 81.1 0.77 1.7E-05 42.7 1.4 13 123-135 11-23 (224)
202 TIGR01990 bPGM beta-phosphoglu 81.1 1.3 2.7E-05 39.1 2.7 28 124-160 1-28 (185)
203 PLN02779 haloacid dehalogenase 81.1 0.9 1.9E-05 44.0 1.9 18 119-136 37-54 (286)
204 TIGR01494 ATPase_P-type ATPase 81.1 1.9 4.1E-05 45.0 4.4 57 283-357 387-443 (499)
205 TIGR01656 Histidinol-ppas hist 80.9 1.6 3.5E-05 37.6 3.3 36 293-331 102-137 (147)
206 PRK10748 flavin mononucleotide 80.6 4 8.7E-05 38.1 6.1 15 122-136 10-24 (238)
207 PLN02940 riboflavin kinase 80.4 2.8 6.2E-05 42.4 5.3 61 293-361 151-216 (382)
208 TIGR01549 HAD-SF-IA-v1 haloaci 80.3 1.2 2.6E-05 38.1 2.2 34 293-330 119-152 (154)
209 PLN03243 haloacid dehalogenase 80.1 1.8 4E-05 41.3 3.6 49 296-346 137-192 (260)
210 COG4087 Soluble P-type ATPase 79.4 2.4 5.1E-05 36.7 3.6 48 125-178 17-64 (152)
211 PRK13226 phosphoglycolate phos 79.3 0.87 1.9E-05 42.3 1.1 28 123-159 13-40 (229)
212 TIGR01545 YfhB_g-proteo haloac 79.2 1.2 2.6E-05 41.2 1.9 16 121-136 4-19 (210)
213 PRK10444 UMP phosphatase; Prov 79.2 5.6 0.00012 37.7 6.6 61 293-361 175-245 (248)
214 PRK10563 6-phosphogluconate ph 79.0 1.4 3E-05 40.3 2.3 36 293-331 143-178 (221)
215 KOG0202 Ca2+ transporting ATPa 78.6 1.6 3.5E-05 48.0 2.9 59 284-357 659-720 (972)
216 PRK10563 6-phosphogluconate ph 78.4 1.4 3E-05 40.4 2.1 15 122-136 4-18 (221)
217 COG0546 Gph Predicted phosphat 78.1 1.3 2.9E-05 40.9 1.9 49 295-346 116-172 (220)
218 PRK13478 phosphonoacetaldehyde 77.9 1.2 2.7E-05 42.3 1.7 15 122-136 4-18 (267)
219 COG2503 Predicted secreted aci 77.7 3.5 7.5E-05 39.2 4.5 44 93-136 49-93 (274)
220 COG3882 FkbH Predicted enzyme 77.5 6 0.00013 41.2 6.5 71 111-181 210-294 (574)
221 PF06888 Put_Phosphatase: Puta 77.5 3.1 6.6E-05 39.4 4.2 35 144-178 71-108 (234)
222 TIGR01452 PGP_euk phosphoglyco 77.5 3.1 6.8E-05 39.9 4.4 43 295-345 205-249 (279)
223 TIGR01261 hisB_Nterm histidino 77.3 1.8 3.9E-05 38.3 2.4 48 122-169 1-55 (161)
224 KOG1618 Predicted phosphatase 77.2 3 6.5E-05 41.2 4.1 42 119-166 32-78 (389)
225 TIGR02009 PGMB-YQAB-SF beta-ph 76.8 2.1 4.6E-05 37.6 2.8 28 123-159 2-29 (185)
226 PF13419 HAD_2: Haloacid dehal 76.7 2.2 4.7E-05 36.5 2.7 36 293-331 134-169 (176)
227 PRK09449 dUMP phosphatase; Pro 76.4 1.4 3E-05 40.4 1.5 49 296-346 122-178 (224)
228 PRK13222 phosphoglycolate phos 76.1 1.4 3.1E-05 40.1 1.6 14 122-135 6-19 (226)
229 PLN02811 hydrolase 75.3 4 8.7E-05 37.5 4.3 59 294-360 139-205 (220)
230 KOG1615 Phosphoserine phosphat 75.2 5.2 0.00011 36.9 4.8 34 143-176 87-121 (227)
231 TIGR01428 HAD_type_II 2-haloal 75.2 1.6 3.4E-05 39.2 1.5 43 294-344 150-193 (198)
232 PRK09456 ?-D-glucose-1-phospha 74.7 3.8 8.3E-05 36.9 3.9 35 294-331 143-177 (199)
233 TIGR01428 HAD_type_II 2-haloal 74.7 4.8 0.0001 36.1 4.6 35 296-332 120-158 (198)
234 COG0637 Predicted phosphatase/ 73.9 1.8 4E-05 40.2 1.7 33 296-331 146-178 (221)
235 TIGR01681 HAD-SF-IIIC HAD-supe 73.5 4.5 9.7E-05 34.2 3.8 35 293-330 90-126 (128)
236 TIGR01668 YqeG_hyp_ppase HAD s 73.3 4.1 8.9E-05 36.1 3.7 45 293-345 92-138 (170)
237 TIGR02247 HAD-1A3-hyp Epoxide 72.3 2.1 4.6E-05 38.8 1.7 54 295-369 155-209 (211)
238 TIGR01509 HAD-SF-IA-v3 haloaci 72.2 4.8 0.0001 35.1 3.9 34 295-331 143-176 (183)
239 KOG0203 Na+/K+ ATPase, alpha s 71.8 7 0.00015 43.3 5.5 38 314-356 707-747 (1019)
240 PF12710 HAD: haloacid dehalog 71.7 2.1 4.5E-05 37.8 1.4 11 125-135 1-11 (192)
241 PRK06698 bifunctional 5'-methy 71.1 2.1 4.5E-05 44.3 1.5 14 123-136 242-255 (459)
242 TIGR01686 FkbH FkbH-like domai 70.7 10 0.00022 37.2 6.2 36 293-331 87-122 (320)
243 PRK10725 fructose-1-P/6-phosph 70.5 4.7 0.0001 35.6 3.4 30 121-159 4-33 (188)
244 PLN02940 riboflavin kinase 70.4 3.7 8E-05 41.5 3.1 16 121-136 10-25 (382)
245 KOG3120 Predicted haloacid deh 70.1 4.1 8.8E-05 38.3 2.9 83 280-370 151-248 (256)
246 KOG0206 P-type ATPase [General 69.9 2.7 5.9E-05 48.1 2.1 50 282-341 771-820 (1151)
247 TIGR01509 HAD-SF-IA-v3 haloaci 68.6 2 4.4E-05 37.5 0.6 12 125-136 2-13 (183)
248 PF11019 DUF2608: Protein of u 68.0 18 0.00039 34.5 7.0 51 291-344 160-212 (252)
249 COG4483 Uncharacterized protei 67.1 3.5 7.5E-05 31.0 1.5 27 297-330 6-32 (68)
250 PRK08238 hypothetical protein; 67.0 5.1 0.00011 41.9 3.3 41 293-346 128-168 (479)
251 PHA02597 30.2 hypothetical pro 66.3 8.1 0.00017 34.6 4.1 14 123-136 3-16 (197)
252 COG1011 Predicted hydrolase (H 66.1 3.8 8.3E-05 37.3 2.0 49 297-346 127-181 (229)
253 KOG3085 Predicted hydrolase (H 65.6 6.9 0.00015 37.1 3.6 43 296-346 172-216 (237)
254 PRK05446 imidazole glycerol-ph 65.5 12 0.00026 37.6 5.5 43 293-343 105-148 (354)
255 TIGR01548 HAD-SF-IA-hyp1 haloa 65.5 4.9 0.00011 36.1 2.5 27 124-159 2-28 (197)
256 TIGR02247 HAD-1A3-hyp Epoxide 65.1 14 0.00029 33.5 5.4 13 123-135 3-15 (211)
257 TIGR01549 HAD-SF-IA-v1 haloaci 64.9 6.5 0.00014 33.5 3.1 28 124-160 1-28 (154)
258 PF00702 Hydrolase: haloacid d 63.4 4.5 9.8E-05 36.1 1.9 49 293-345 152-204 (215)
259 KOG3109 Haloacid dehalogenase- 63.4 7.6 0.00017 36.5 3.3 74 282-367 155-229 (244)
260 PLN02177 glycerol-3-phosphate 62.1 10 0.00023 39.8 4.5 42 292-345 175-216 (497)
261 PRK09456 ?-D-glucose-1-phospha 61.8 4.7 0.0001 36.4 1.7 48 322-369 141-198 (199)
262 TIGR01456 CECR5 HAD-superfamil 61.7 26 0.00056 34.4 7.0 46 124-175 2-55 (321)
263 TIGR02252 DREG-2 REG-2-like, H 58.4 10 0.00022 34.0 3.3 14 123-136 1-14 (203)
264 KOG3120 Predicted haloacid deh 57.7 25 0.00054 33.2 5.6 19 119-137 10-28 (256)
265 TIGR01993 Pyr-5-nucltdase pyri 57.3 12 0.00026 33.0 3.6 37 296-333 109-152 (184)
266 PF06014 DUF910: Bacterial pro 54.1 4.3 9.4E-05 30.3 0.1 27 297-330 6-32 (62)
267 TIGR01493 HAD-SF-IA-v2 Haloaci 53.6 12 0.00026 32.6 2.8 27 124-159 1-27 (175)
268 cd00218 GlcAT-I Beta1,3-glucur 53.4 26 0.00056 33.0 5.1 45 286-334 72-119 (223)
269 PF06941 NT5C: 5' nucleotidase 52.9 7.7 0.00017 34.9 1.5 13 123-135 2-15 (191)
270 KOG2116 Protein involved in pl 52.5 22 0.00047 38.4 4.9 77 119-197 527-616 (738)
271 TIGR01691 enolase-ppase 2,3-di 51.6 14 0.00031 34.4 3.1 36 293-331 153-188 (220)
272 COG2179 Predicted hydrolase of 50.9 25 0.00054 31.7 4.3 44 294-344 95-139 (175)
273 smart00577 CPDc catalytic doma 50.6 8.6 0.00019 33.2 1.4 30 298-330 104-133 (148)
274 KOG2134 Polynucleotide kinase 50.1 14 0.0003 37.5 2.9 48 119-166 72-127 (422)
275 TIGR02399 salt_tol_Pase glucos 49.7 19 0.0004 36.0 3.6 46 119-166 5-50 (389)
276 PLN02919 haloacid dehalogenase 49.6 24 0.00053 40.6 5.1 60 294-361 220-285 (1057)
277 TIGR01685 MDP-1 magnesium-depe 48.6 29 0.00063 31.2 4.5 36 293-331 108-149 (174)
278 PLN02919 haloacid dehalogenase 48.1 8.8 0.00019 44.1 1.3 14 123-136 76-89 (1057)
279 TIGR00735 hisF imidazoleglycer 46.7 66 0.0014 30.4 6.9 62 110-171 112-180 (254)
280 PF03360 Glyco_transf_43: Glyc 44.2 28 0.0006 32.4 3.7 44 287-334 55-101 (207)
281 KOG1359 Glycine C-acetyltransf 44.2 53 0.0011 32.5 5.7 77 106-196 175-277 (417)
282 COG4996 Predicted phosphatase 43.9 39 0.00085 29.3 4.3 55 123-177 1-75 (164)
283 PHA02530 pseT polynucleotide k 43.8 24 0.00052 33.8 3.5 37 293-331 252-288 (300)
284 KOG0208 Cation transport ATPas 43.3 22 0.00048 40.1 3.4 62 293-366 840-903 (1140)
285 cd04256 AAK_P5CS_ProBA AAK_P5C 42.8 73 0.0016 30.9 6.6 25 117-141 190-214 (284)
286 TIGR01460 HAD-SF-IIA Haloacid 42.3 33 0.00071 32.0 4.0 35 294-331 190-226 (236)
287 PF09506 Salt_tol_Pase: Glucos 41.8 27 0.00059 34.8 3.4 43 122-166 2-44 (381)
288 PF11019 DUF2608: Protein of u 41.8 32 0.00069 32.8 3.9 29 109-137 5-35 (252)
289 TIGR01511 ATPase-IB1_Cu copper 41.1 46 0.00099 35.5 5.3 58 121-180 384-442 (562)
290 PF04312 DUF460: Protein of un 40.9 27 0.00059 30.3 2.9 61 124-197 45-108 (138)
291 PLN02458 transferase, transfer 40.8 43 0.00094 33.3 4.6 35 294-334 190-226 (346)
292 COG4359 Uncharacterized conser 40.4 17 0.00036 33.4 1.6 15 121-135 2-16 (220)
293 PLN02177 glycerol-3-phosphate 39.1 19 0.00041 37.9 2.0 20 158-177 121-140 (497)
294 TIGR01664 DNA-3'-Pase DNA 3'-p 39.0 28 0.0006 30.8 2.8 35 294-331 110-154 (166)
295 PRK12314 gamma-glutamyl kinase 33.4 1.5E+02 0.0033 28.3 7.2 19 117-135 166-184 (266)
296 TIGR01454 AHBA_synth_RP 3-amin 32.3 47 0.001 29.7 3.3 35 144-178 75-110 (205)
297 PTZ00489 glutamate 5-kinase; P 32.3 1.6E+02 0.0035 28.2 7.1 19 117-135 159-177 (264)
298 TIGR01459 HAD-SF-IIA-hyp4 HAD- 32.0 61 0.0013 30.2 4.1 36 294-331 197-233 (242)
299 cd02966 TlpA_like_family TlpA- 31.5 1.5E+02 0.0033 22.5 5.8 73 106-193 36-112 (116)
300 cd04239 AAK_UMPK-like AAK_UMPK 31.3 1E+02 0.0022 28.6 5.4 61 117-177 144-219 (229)
301 KOG4549 Magnesium-dependent ph 31.0 1.1E+02 0.0024 26.4 5.0 54 122-175 18-76 (144)
302 PRK11009 aphA acid phosphatase 30.9 41 0.00089 31.8 2.7 25 145-169 115-140 (237)
303 COG0241 HisB Histidinol phosph 30.8 1.4E+02 0.0031 27.1 6.0 52 284-346 101-152 (181)
304 PRK00358 pyrH uridylate kinase 30.3 1.2E+02 0.0026 28.1 5.7 64 115-178 144-222 (231)
305 KOG0204 Calcium transporting A 29.9 82 0.0018 35.4 5.0 53 292-356 725-780 (1034)
306 PRK13587 1-(5-phosphoribosyl)- 29.9 1.9E+02 0.0041 27.1 7.1 46 121-178 162-212 (234)
307 COG5083 SMP2 Uncharacterized p 29.6 29 0.00062 35.9 1.4 57 119-175 372-435 (580)
308 PF13419 HAD_2: Haloacid dehal 28.8 46 0.001 28.0 2.5 34 144-177 77-111 (176)
309 TIGR00071 hisT_truA pseudourid 28.8 68 0.0015 30.0 3.8 55 122-176 2-57 (227)
310 PF06342 DUF1057: Alpha/beta h 28.0 90 0.0019 30.6 4.5 68 271-346 69-136 (297)
311 TIGR01449 PGP_bact 2-phosphogl 27.7 70 0.0015 28.5 3.6 34 145-178 86-120 (213)
312 PF09949 DUF2183: Uncharacteri 27.6 1.3E+02 0.0027 24.6 4.7 36 293-333 50-86 (100)
313 PRK10826 2-deoxyglucose-6-phos 27.5 76 0.0016 28.8 3.8 35 144-178 92-127 (222)
314 PRK14058 acetylglutamate/acety 27.0 1.4E+02 0.003 28.5 5.7 23 113-135 176-198 (268)
315 PRK14557 pyrH uridylate kinase 26.7 1.8E+02 0.0039 27.6 6.3 62 117-178 151-228 (247)
316 cd04731 HisF The cyclase subun 26.6 2E+02 0.0044 26.6 6.6 59 109-170 108-173 (243)
317 KOG3109 Haloacid dehalogenase- 26.2 64 0.0014 30.4 3.0 41 291-333 122-171 (244)
318 PF06189 5-nucleotidase: 5'-nu 26.0 1.4E+02 0.0031 28.7 5.4 58 120-177 119-204 (264)
319 COG0647 NagD Predicted sugar p 25.9 1.1E+02 0.0024 29.6 4.7 42 296-345 194-237 (269)
320 TIGR01672 AphA HAD superfamily 25.9 57 0.0012 30.8 2.7 17 315-331 187-203 (237)
321 cd04242 AAK_G5K_ProB AAK_G5K_P 25.8 93 0.002 29.3 4.2 21 115-135 152-172 (251)
322 CHL00202 argB acetylglutamate 25.2 1.8E+02 0.0039 28.1 6.1 59 114-177 189-247 (284)
323 PRK14558 pyrH uridylate kinase 25.2 1.5E+02 0.0033 27.4 5.5 61 117-177 144-219 (231)
324 PRK14556 pyrH uridylate kinase 25.0 1.5E+02 0.0032 28.4 5.4 61 118-178 163-238 (249)
325 KOG0209 P-type ATPase [Inorgan 24.7 57 0.0012 36.5 2.7 28 314-346 808-835 (1160)
326 TIGR02076 pyrH_arch uridylate 23.9 2.4E+02 0.0051 25.9 6.4 21 115-135 125-145 (221)
327 PF13382 Adenine_deam_C: Adeni 23.2 3.1E+02 0.0067 24.6 6.8 55 314-373 67-132 (171)
328 cd04255 AAK_UMPK-MosAB AAK_UMP 23.0 2.5E+02 0.0055 26.8 6.6 21 115-135 171-191 (262)
329 TIGR01490 HAD-SF-IB-hyp1 HAD-s 22.7 1.1E+02 0.0024 27.1 3.9 35 144-178 87-122 (202)
330 PRK04128 1-(5-phosphoribosyl)- 22.6 1.5E+02 0.0033 27.7 4.9 47 122-178 44-93 (228)
331 TIGR01092 P5CS delta l-pyrroli 22.5 2.1E+02 0.0045 31.6 6.6 60 117-177 179-264 (715)
332 KOG1605 TFIIF-interacting CTD 22.3 50 0.0011 31.8 1.6 18 119-136 86-103 (262)
333 cd04254 AAK_UMPK-PyrH-Ec UMP k 21.7 1.8E+02 0.0038 27.1 5.1 64 115-178 144-222 (231)
334 COG5663 Uncharacterized conser 21.6 43 0.00093 30.3 0.9 11 125-135 9-19 (194)
335 PLN02418 delta-1-pyrroline-5-c 21.1 2.3E+02 0.005 31.3 6.6 60 117-177 187-272 (718)
336 cd00006 PTS_IIA_man PTS_IIA, P 21.1 2.4E+02 0.0053 23.2 5.4 50 112-177 48-100 (122)
337 PLN02499 glycerol-3-phosphate 20.7 54 0.0012 34.5 1.5 14 122-135 8-21 (498)
338 smart00775 LNS2 LNS2 domain. T 20.4 1.5E+02 0.0032 25.9 4.1 37 293-331 102-138 (157)
339 KOG1476 Beta-1,3-glucuronyltra 20.2 2E+02 0.0044 28.5 5.3 39 295-334 165-205 (330)
340 TIGR01544 HAD-SF-IE haloacid d 20.1 1.9E+02 0.0041 28.1 5.1 36 143-178 120-156 (277)
341 cd04241 AAK_FomA-like AAK_FomA 20.1 2.6E+02 0.0057 26.1 6.0 19 117-135 159-177 (252)
342 COG1608 Predicted archaeal kin 20.1 4.3E+02 0.0094 25.3 7.2 21 116-136 158-178 (252)
No 1
>PLN03017 trehalose-phosphatase
Probab=100.00 E-value=2.1e-73 Score=559.83 Aligned_cols=361 Identities=63% Similarity=1.056 Sum_probs=319.1
Q ss_pred CcccceEEeecCcCccccceeeEeecccccccCCCCCCCCCCCCccccccccccccCCCCccc--CCCcchhhHHHHHHh
Q 017025 1 MTNQNVVVASDRKSSNIGLKITVTLTNSTLFSGADSKALPAPGGGFITISRKNILRKPTDTTD--QGGNKINAWVNSLRA 78 (379)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 78 (379)
|..||||| ++.++ ++.+..+++|++ .+..+.+++ ++++++|||+..+ +.. .+.+++++|+|+||+
T Consensus 1 ~~~~~~~~-~~~~~---~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 67 (366)
T PLN03017 1 SASQNVVV-SETTT---SSIIPNNVSNSS--NSSSQKLPP----GLISISKKKLLKN---IDIINGGGQRINAWVDSMRA 67 (366)
T ss_pred CCccceEE-ecccc---ceEeeccccCCC--CccccCCCC----ccCCcchhcchhh---hccccccccccchHHHHHhc
Confidence 78899999 99988 888888899987 344454432 6678899998765 444 256889999999999
Q ss_pred cCCCCcCCCCCCCCCchhhhhhhhcCCCccccHHHHHHhccCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHh
Q 017025 79 SSPTRLKSSIAFSPQTEEQTSWIARHPSALSKFEEIVNASKGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVAR 158 (379)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~w~~~~psal~~f~~~~~~~~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~ 158 (379)
|||||.++.++.-+.++.|++|+.+|||||+.|++|++.+++++++||+||||||+|++++|+.+.++++++++|++|++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~w~~~~psal~~~~~~~~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La~ 147 (366)
T PLN03017 68 SSPTHLKSLPSSISSQQQLNSWIMQHPSALEMFEQIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAK 147 (366)
T ss_pred cCCCccccccccccchhhhhHHHhhCChHHHHHHHHHHHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHhc
Confidence 99999887665334468899999999999999999999999999999999999999999999888999999999999996
Q ss_pred cCCEEEEcCCChhhHHhhccccCceEEecCCceEecCCCcc-ccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCc
Q 017025 159 YFPTAIVTGRCRDKVFSFVKLAGLYYAGSHGMDIEGPSKKR-RYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGA 237 (379)
Q Consensus 159 ~~~vaIaTGR~~~~l~~~~~l~~l~li~~nGa~I~~~~~~~-~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~ 237 (379)
.++|+|+|||++..+.+++++.+++|+|+||++|+.+++.. .+.+..++..++++.+|+++++++++.|.++++.+||+
T Consensus 148 ~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa 227 (366)
T PLN03017 148 CFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGA 227 (366)
T ss_pred CCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCC
Confidence 68999999999999999988888999999999999876532 12233344566777789999999999999999999999
Q ss_pred EEEeccceEEEeeccCCcchHHHHHHHHHHHHhhCCCcEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEE
Q 017025 238 KVENNKFCLSVHFRCVDENSWGTLAEQVRVVLDKYPKLTLTQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVY 317 (379)
Q Consensus 238 ~iE~~~~~l~~~~r~vd~~~~~~l~e~v~~vl~~~p~l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~ 317 (379)
++|+|++|+++|||++++..|.++.+.++.+++++|+++++.|++++||+|.++||||+|+++|++.+|+...+++.++|
T Consensus 228 ~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvy 307 (366)
T PLN03017 228 KVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVY 307 (366)
T ss_pred EEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEE
Confidence 99999999999999998888888889999999999999999999999999966999999999999999998665678999
Q ss_pred EcCCcCCHHHHHHHHhcCCeEEEEecCCCCCCcceEEeCCHHHHHHHHHHHHHhhhh
Q 017025 318 IGDDRTDEDAFKVLRNRGQGFGILVSKTPKETHASYSLQEPSEVKDFLRRLVQWKRL 374 (379)
Q Consensus 318 ~GD~~NDe~mf~~~~~~~~G~gVaVgna~~~t~A~y~l~d~~eV~~~L~~Lv~~~~~ 374 (379)
||||.+||+||+++++.++|+||.||..++++.|.|++++|++|++||++|+.|++.
T Consensus 308 iGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~~ 364 (366)
T PLN03017 308 IGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQM 364 (366)
T ss_pred eCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999998877799999998888999999999999999999999999986
No 2
>PLN02580 trehalose-phosphatase
Probab=100.00 E-value=1.5e-69 Score=536.66 Aligned_cols=326 Identities=57% Similarity=0.990 Sum_probs=292.1
Q ss_pred CCccccccccccccCCCCcccCCCcchhhHHHHHHhcCCCCcCCCCCCC------CCchhhhhhhhcCCCccccHHHHHH
Q 017025 43 GGGFITISRKNILRKPTDTTDQGGNKINAWVNSLRASSPTRLKSSIAFS------PQTEEQTSWIARHPSALSKFEEIVN 116 (379)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~w~~~~psal~~f~~~~~ 116 (379)
.|.+++||||| ||++ +++++|+|+|+||+|||||.+..++.+ +.+++|.+||.+|||||.+|+++++
T Consensus 41 ~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~al~~~~~~~~ 113 (384)
T PLN02580 41 SNLFLTIPRKK----TGKL---DDVRSNGWLDAMKSSSPPRKKLNKDFNVELASPDTDFAYRTWMLKYPSALTSFEQIAN 113 (384)
T ss_pred CCceeeccccC----CCcc---ccccccchhhhhhccCCCccccccccccccccccchHHHHHHHHhCcHHHHHHHHHHH
Confidence 35999999999 8999 789999999999999999988654432 3467899999999999999999999
Q ss_pred hccCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhccccCceEEecCCceEecCC
Q 017025 117 ASKGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVKLAGLYYAGSHGMDIEGPS 196 (379)
Q Consensus 117 ~~~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~~vaIaTGR~~~~l~~~~~l~~l~li~~nGa~I~~~~ 196 (379)
+.+++++++||||||||+|++++|+.+.++++++++|++|+++++++|+|||+++.|.+++++++++|+|+||++++.+.
T Consensus 114 ~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~~~l~laGsHG~e~~~p~ 193 (384)
T PLN02580 114 FAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGLTELYYAGSHGMDIMGPV 193 (384)
T ss_pred HhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCCCCccEEEeCCceeecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred Cccc---c--------ccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEeccceEEEeeccCCcchHHHHHHHH
Q 017025 197 KKRR---Y--------KKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSVHFRCVDENSWGTLAEQV 265 (379)
Q Consensus 197 ~~~~---~--------~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~~~~l~~~~r~vd~~~~~~l~e~v 265 (379)
+... + .+..+|..++++.+|+++++++++.+.++++.++|+++|+|++|+.+|||+++++.+..+.+.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~~~~~l 273 (384)
T PLN02580 194 RESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCV 273 (384)
T ss_pred CCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHHHHHHH
Confidence 3210 0 1123455677778899999999999999999999999999999999999999887778888888
Q ss_pred HHHHhhCCCcEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCC
Q 017025 266 RVVLDKYPKLTLTQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKT 345 (379)
Q Consensus 266 ~~vl~~~p~l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna 345 (379)
+.++++++++.++.|++++||+|.++||||.|+++|++++|++.++...++||||+.|||+||++++..+.|+||+|+|+
T Consensus 274 ~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~ 353 (384)
T PLN02580 274 HDVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSV 353 (384)
T ss_pred HHHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecC
Confidence 98888888899999999999999339999999999999999986433357999999999999999987666999999999
Q ss_pred CCCCcceEEeCCHHHHHHHHHHHHHhhhhh
Q 017025 346 PKETHASYSLQEPSEVKDFLRRLVQWKRLS 375 (379)
Q Consensus 346 ~~~t~A~y~l~d~~eV~~~L~~Lv~~~~~~ 375 (379)
++++.|.|++++|++|++||++|+.|++.+
T Consensus 354 ~~~t~A~y~L~dp~eV~~~L~~L~~~~~~~ 383 (384)
T PLN02580 354 PKESNAFYSLRDPSEVMEFLKSLVTWKKSE 383 (384)
T ss_pred CCCccceEEcCCHHHHHHHHHHHHHhhhcC
Confidence 999999999999999999999999999875
No 3
>PLN02151 trehalose-phosphatase
Probab=100.00 E-value=3.2e-67 Score=514.64 Aligned_cols=342 Identities=66% Similarity=1.071 Sum_probs=301.4
Q ss_pred cceeeEeecccccccCCCCCCCCCCCCccccccccccccCCCCcccC-CCcchhhHHHHHHhcCCCCcCCCCCCCCCchh
Q 017025 18 GLKITVTLTNSTLFSGADSKALPAPGGGFITISRKNILRKPTDTTDQ-GGNKINAWVNSLRASSPTRLKSSIAFSPQTEE 96 (379)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (379)
.+-.+-+++||.++...+. ...++++||+..+ +..+ |..++++|+|+||+|||||.++ ..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 72 (354)
T PLN02151 11 KMLETKTISNSEVLYVGRD--------DGDTSPKTKALHD---FQINNGGGLIRSWVDSMRACSPTRPKS-------FNK 72 (354)
T ss_pred chhhccccCCcceeeeecC--------CCCcchhhhHhhh---hhhhccccccchHHHHHhccCCCcccc-------hhh
Confidence 4555678899999888876 3455688887776 5553 4577999999999999999875 358
Q ss_pred hhhhhhcCCCccccHHHHHHhccCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhh
Q 017025 97 QTSWIARHPSALSKFEEIVNASKGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSF 176 (379)
Q Consensus 97 ~~~w~~~~psal~~f~~~~~~~~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~~vaIaTGR~~~~l~~~ 176 (379)
|.+|+.+|||||++|+++++.++++++++|+||||||+|++++|+.+.++++++++|++|++.++++|+|||+++.+.++
T Consensus 73 ~~~w~~~~p~a~~~~~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~ 152 (354)
T PLN02151 73 QSCWIKEHPSALNMFEEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSF 152 (354)
T ss_pred HHHHHHhCChHHHHHHHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998789999999999999999
Q ss_pred ccccCceEEecCCceEecCCCccccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEeccceEEEeeccCCcc
Q 017025 177 VKLAGLYYAGSHGMDIEGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSVHFRCVDEN 256 (379)
Q Consensus 177 ~~l~~l~li~~nGa~I~~~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~~~~l~~~~r~vd~~ 256 (379)
+++++++|+|+||++++.+++...+....++..++++.+|.+.++++++.|.+++..+||+++|+|++|+++|||+++++
T Consensus 153 ~~~~~l~laGsHG~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~ 232 (354)
T PLN02151 153 VKLTELYYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN 232 (354)
T ss_pred cCCccceEEEeCCceeecCCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH
Confidence 99999999999999999875432222222334556677888999999999998888999999999999999999999887
Q ss_pred hHHHHHHHHHHHHhhCCCcEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCC
Q 017025 257 SWGTLAEQVRVVLDKYPKLTLTQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQ 336 (379)
Q Consensus 257 ~~~~l~e~v~~vl~~~p~l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~ 336 (379)
.+.++.+.++.+++.+|+++++.|++++||+|.++||||+|+++|++.+++....+++++|||||.+||+||++++..++
T Consensus 233 ~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~ 312 (354)
T PLN02151 233 KWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQ 312 (354)
T ss_pred HHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCC
Confidence 77778888888998998899999999999999659999999999999999886555689999999999999999987767
Q ss_pred eEEEEecCCCCCCcceEEeCCHHHHHHHHHHHHHhhhhhcc
Q 017025 337 GFGILVSKTPKETHASYSLQEPSEVKDFLRRLVQWKRLSLR 377 (379)
Q Consensus 337 G~gVaVgna~~~t~A~y~l~d~~eV~~~L~~Lv~~~~~~~~ 377 (379)
|+||.|+..++++.|+|++++|++|++||++|+.|++.+++
T Consensus 313 G~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~~~~~~ 353 (354)
T PLN02151 313 GLGILVSKYAKETNASYSLQEPDEVMEFLERLVEWKQLRCG 353 (354)
T ss_pred CccEEeccCCCCCcceEeCCCHHHHHHHHHHHHHhhhcccC
Confidence 99999998888999999999999999999999999998764
No 4
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=100.00 E-value=1.6e-37 Score=297.39 Aligned_cols=232 Identities=25% Similarity=0.451 Sum_probs=191.4
Q ss_pred cEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHh-c-CCEEEEcCCChhhHHhhccccCceEEecCCceEecCCCcc
Q 017025 122 KIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVAR-Y-FPTAIVTGRCRDKVFSFVKLAGLYYAGSHGMDIEGPSKKR 199 (379)
Q Consensus 122 ~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~-~-~~vaIaTGR~~~~l~~~~~l~~l~li~~nGa~I~~~~~~~ 199 (379)
+.+|||||||||+++..+|+.+.++++++++|++|++ . +.|+|+|||+...+.++++...++++++||++|+.+.+..
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 93 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKT 93 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCe
Confidence 5899999999999999999999999999999999998 4 6899999999999999987666789999999998765432
Q ss_pred ccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEeccceEEEeeccCCcchHHHHHHHH-HHHHhhCCCcEEE
Q 017025 200 RYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSVHFRCVDENSWGTLAEQV-RVVLDKYPKLTLT 278 (379)
Q Consensus 200 ~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~~~~l~~~~r~vd~~~~~~l~e~v-~~vl~~~p~l~v~ 278 (379)
. ...... +.+.++++.+.++.++.||.++|.++.++.+|||.++++ .+....+ +.+.+.++.+.+.
T Consensus 94 ~--------~~~l~~---~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~~i~~~~~~~~~~ 160 (266)
T PRK10187 94 H--------IVHLPD---AIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQRITQIWPQLALQ 160 (266)
T ss_pred e--------eccCCh---hHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHHHHHhhCCceEEe
Confidence 1 101111 334566777777677889999999999999999987432 2333333 3445556667778
Q ss_pred eCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCCCCcceEEeCCH
Q 017025 279 QGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPKETHASYSLQEP 358 (379)
Q Consensus 279 ~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~~t~A~y~l~d~ 358 (379)
+|+.++||+|+ ++|||.||++|++++|++.+ .++||||+.||++||+++++.+ |++|+|||+ .+.|.|.+.+|
T Consensus 161 ~g~~~lEi~p~-g~~Kg~al~~ll~~~~~~~~---~v~~~GD~~nD~~mf~~~~~~~-g~~vavg~a--~~~A~~~l~~~ 233 (266)
T PRK10187 161 PGKCVVEIKPR-GTNKGEAIAAFMQEAPFAGR---TPVFVGDDLTDEAGFAVVNRLG-GISVKVGTG--ATQASWRLAGV 233 (266)
T ss_pred CCCEEEEeeCC-CCCHHHHHHHHHHhcCCCCC---eEEEEcCCccHHHHHHHHHhcC-CeEEEECCC--CCcCeEeCCCH
Confidence 89999999999 99999999999999998875 8999999999999999996543 899999986 58899999999
Q ss_pred HHHHHHHHHHHHhhh
Q 017025 359 SEVKDFLRRLVQWKR 373 (379)
Q Consensus 359 ~eV~~~L~~Lv~~~~ 373 (379)
++|..||..|+...+
T Consensus 234 ~~v~~~L~~l~~~~~ 248 (266)
T PRK10187 234 PDVWSWLEMITTAQQ 248 (266)
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999986544
No 5
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=100.00 E-value=3.2e-38 Score=296.53 Aligned_cols=225 Identities=43% Similarity=0.643 Sum_probs=150.2
Q ss_pred EEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcC--CEEEEcCCChhhHHhhccccCceEEecCCceEecCCCcccccc
Q 017025 126 FLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYF--PTAIVTGRCRDKVFSFVKLAGLYYAGSHGMDIEGPSKKRRYKK 203 (379)
Q Consensus 126 flD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~--~vaIaTGR~~~~l~~~~~l~~l~li~~nGa~I~~~~~~~~~~~ 203 (379)
||||||||.++..+|+.+.++++++++|++|+++. .++|+|||+...+..+.++++++++|+||++++.+++..+..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~- 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTN- 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE--
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCccccccc-
Confidence 79999999999999999999999999999999995 599999999999888889999999999999999987643211
Q ss_pred CCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEeccceEEEeeccCCcc----hHHHHHHHHHHHHhhCCCcEEEe
Q 017025 204 GNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSVHFRCVDEN----SWGTLAEQVRVVLDKYPKLTLTQ 279 (379)
Q Consensus 204 ~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~~~~l~~~~r~vd~~----~~~~l~e~v~~vl~~~p~l~v~~ 279 (379)
.......++.+.+.+.+.++.++++|+++|++++++.||||.++++ ...++.+.+++.+..++++++..
T Consensus 80 -------~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~ 152 (235)
T PF02358_consen 80 -------LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVP 152 (235)
T ss_dssp -------TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE
T ss_pred -------cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEE
Confidence 1122223456777888877788899999999999999999999876 45678888888888777899999
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhc-CCeEEEEecCCC---CCCcceEEe
Q 017025 280 GRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNR-GQGFGILVSKTP---KETHASYSL 355 (379)
Q Consensus 280 g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~-~~G~gVaVgna~---~~t~A~y~l 355 (379)
|++++||+|. +.+||.|+++|++.++....+.+.++|+|||.+||+||++++.. ..|++|.|+... ++|.|+|.+
T Consensus 153 g~~~vEvrp~-~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 153 GKKVVEVRPP-GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRL 231 (235)
T ss_dssp -SSEEEEE-T-T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES---------------
T ss_pred CCCEEEEEeC-CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccc
Confidence 9999999999 99999999999999987633345899999999999999999864 238999999975 569999999
Q ss_pred CCHH
Q 017025 356 QEPS 359 (379)
Q Consensus 356 ~d~~ 359 (379)
+||+
T Consensus 232 ~~p~ 235 (235)
T PF02358_consen 232 DDPS 235 (235)
T ss_dssp ----
T ss_pred ccCC
Confidence 9884
No 6
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=100.00 E-value=4.1e-36 Score=283.89 Aligned_cols=236 Identities=31% Similarity=0.430 Sum_probs=183.6
Q ss_pred CCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcC--CEEEEcCCChhhHHhhccccCceEEecCCceEecCCC
Q 017025 120 GKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYF--PTAIVTGRCRDKVFSFVKLAGLYYAGSHGMDIEGPSK 197 (379)
Q Consensus 120 ~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~--~vaIaTGR~~~~l~~~~~l~~l~li~~nGa~I~~~~~ 197 (379)
+|++++||||||||+++..+|+.+.++++++++|++|+++. .++|+|||+...+..++..+.++++|+||++++.+ +
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~hG~~~~~~-g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEHGCEMKDN-G 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeecCEEEecC-C
Confidence 47899999999999999999999999999999999999983 57899999998888887788899999999999873 3
Q ss_pred ccccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEeccceEEEeeccCC-cchHH-HHHHHHHHHHhhCCCc
Q 017025 198 KRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSVHFRCVD-ENSWG-TLAEQVRVVLDKYPKL 275 (379)
Q Consensus 198 ~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~~~~l~~~~r~vd-~~~~~-~l~e~v~~vl~~~p~l 275 (379)
... .|.... . ..+...+....+.++....||+++|++++++++|||.+. ++... .+.+.+..+... .++
T Consensus 80 ~~~-----~~~~~~--~-~~~~~~~~~~~l~~~~~~~pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~~~-~~~ 150 (244)
T TIGR00685 80 SCQ-----DWVNLT--E-KIPSWKVRANELREEITTRPGVFIERKGVALAWHYRQAPVPELARFRAKELKEKILSF-TDL 150 (244)
T ss_pred Ccc-----eeeech--h-hhhhHHHHHHHHHHHHhcCCCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHhcC-CCE
Confidence 210 111111 1 011222333333333334499999999999999999983 33222 222333333333 368
Q ss_pred EEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcC---CeEEEEecCCCCCCcce
Q 017025 276 TLTQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRG---QGFGILVSKTPKETHAS 352 (379)
Q Consensus 276 ~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~---~G~gVaVgna~~~t~A~ 352 (379)
.+..|+.++|++|. ++|||.|++++++.+++... .++||||+.||++||+.++..+ .+++|.|+....++.|+
T Consensus 151 ~v~~g~~~~e~~p~-~~~Kg~a~~~~~~~~~~~~~---~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~ 226 (244)
T TIGR00685 151 EVMDGKAVVELKPR-FVNKGEIVKRLLWHQPGSGI---SPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAK 226 (244)
T ss_pred EEEECCeEEEEeeC-CCCHHHHHHHHHHhcccCCC---ceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCce
Confidence 88899999999999 99999999999999998764 8999999999999999994321 37999997666789999
Q ss_pred EEeCCHHHHHHHHHHHH
Q 017025 353 YSLQEPSEVKDFLRRLV 369 (379)
Q Consensus 353 y~l~d~~eV~~~L~~Lv 369 (379)
|+++++++|.++|+.|.
T Consensus 227 ~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 227 FHLTGPQQVLEFLGLLV 243 (244)
T ss_pred EeCCCHHHHHHHHHHHh
Confidence 99999999999999875
No 7
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-35 Score=280.64 Aligned_cols=245 Identities=27% Similarity=0.450 Sum_probs=204.8
Q ss_pred HHHHHhc-cCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcCC--EEEEcCCChhhHHhhccccCceEEecC
Q 017025 112 EEIVNAS-KGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFP--TAIVTGRCRDKVFSFVKLAGLYYAGSH 188 (379)
Q Consensus 112 ~~~~~~~-~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~~--vaIaTGR~~~~l~~~~~l~~l~li~~n 188 (379)
..+...+ +.+++++|+||||||+++..+|+.+.+++++++.|++|+.+.+ ++|+|||+...+..+++++.++++|+|
T Consensus 7 ~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aeh 86 (266)
T COG1877 7 NQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEH 86 (266)
T ss_pred hhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEec
Confidence 3445554 8899999999999999999999999999999999999999954 999999999999999999999999999
Q ss_pred CceEecCCCccccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEeccceEEEeeccCCcchHHHHHHHHHHH
Q 017025 189 GMDIEGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSVHFRCVDENSWGTLAEQVRVV 268 (379)
Q Consensus 189 Ga~I~~~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~~~~l~~~~r~vd~~~~~~l~e~v~~v 268 (379)
|++++.+.+.++.. .....++.+++++.+.++++++++||+++|.+++++.+|||+++++......-..+..
T Consensus 87 Ga~~r~~~g~~~~~--------~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~ 158 (266)
T COG1877 87 GAEVRDPNGKWWIN--------LAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAAT 158 (266)
T ss_pred ceEEecCCCCeeEe--------cCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHh
Confidence 99999887764321 2234456777899999999999999999999999999999999876433222222222
Q ss_pred HhhCCC-cEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC
Q 017025 269 LDKYPK-LTLTQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK 347 (379)
Q Consensus 269 l~~~p~-l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~ 347 (379)
.. .+. ++++.|+.++|++|. +++||.++++++++++.... .++|.|||.+||+||+++++.+ +++|-|+-.
T Consensus 159 ~~-~~~~~~v~~gk~vVEvrp~-~~~KG~a~~~i~~~~~~~~~---~~~~aGDD~TDE~~F~~v~~~~-~~~v~v~~~-- 230 (266)
T COG1877 159 LI-NELKLRVTPGKMVVELRPP-GVSKGAAIKYIMDELPFDGR---FPIFAGDDLTDEDAFAAVNKLD-SITVKVGVG-- 230 (266)
T ss_pred cc-ccccEEEEeCceEEEEeeC-CcchHHHHHHHHhcCCCCCC---cceecCCCCccHHHHHhhccCC-CceEEecCC--
Confidence 22 223 889999999999999 99999999999999988763 8999999999999999997543 677777654
Q ss_pred CCcceEEeCCHHHHHHHHHHHHHhh
Q 017025 348 ETHASYSLQEPSEVKDFLRRLVQWK 372 (379)
Q Consensus 348 ~t~A~y~l~d~~eV~~~L~~Lv~~~ 372 (379)
.+.|.+.+..+.....+|.++....
T Consensus 231 ~t~a~~~~~~~~~~~~~l~~~~~~~ 255 (266)
T COG1877 231 STQAKFRLAGVYGFLRSLYKLLEAL 255 (266)
T ss_pred cccccccccccHHHHHHHHHHHHHh
Confidence 7899999988888888888887654
No 8
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=6.5e-33 Score=298.83 Aligned_cols=240 Identities=31% Similarity=0.457 Sum_probs=194.4
Q ss_pred cHHHHHHhc-cCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc--CCEEEEcCCChhhHHhhccccCceEEe
Q 017025 110 KFEEIVNAS-KGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY--FPTAIVTGRCRDKVFSFVKLAGLYYAG 186 (379)
Q Consensus 110 ~f~~~~~~~-~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~--~~vaIaTGR~~~~l~~~~~l~~l~li~ 186 (379)
.++.+.+++ .+++++++|||||||+++..+|+.+.++++++++|++|+++ +.|+|+|||++..+.++++..++++|+
T Consensus 479 ~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~lia 558 (726)
T PRK14501 479 AAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVA 558 (726)
T ss_pred CHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEE
Confidence 457788887 67899999999999999887788888999999999999995 589999999999999998866789999
Q ss_pred cCCceEecCCCccccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEeccceEEEeeccCCcchHH----HHH
Q 017025 187 SHGMDIEGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSVHFRCVDENSWG----TLA 262 (379)
Q Consensus 187 ~nGa~I~~~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~~~~l~~~~r~vd~~~~~----~l~ 262 (379)
+||++++.+++.+ .. .......|.+ .+...+.++.++.+|.++|.++.++++||+.++++... ++.
T Consensus 559 enG~~i~~~~~~w-~~------~~~~~~~w~~---~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~ 628 (726)
T PRK14501 559 EHGAWSRAPGGEW-QL------LEPVATEWKD---AVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELI 628 (726)
T ss_pred eCCEEEeCCCCce-EE------CCCcchhHHH---HHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHH
Confidence 9999999765432 11 1112334543 44455555667789999999999999999988764322 344
Q ss_pred HHHHHHHhhCCCcEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEe
Q 017025 263 EQVRVVLDKYPKLTLTQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILV 342 (379)
Q Consensus 263 e~v~~vl~~~p~l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaV 342 (379)
+.++.++.. ..+.+.+|++++||+|+ ++|||.|+++|++ +++. ++++||||+.||++||+.++. .|++|+|
T Consensus 629 ~~l~~~~~~-~~~~v~~g~~~veV~p~-~vnKG~al~~ll~--~~~~---d~vl~~GD~~nDe~Mf~~~~~--~~~~v~v 699 (726)
T PRK14501 629 LALSSLLSN-APLEVLRGNKVVEVRPA-GVNKGRAVRRLLE--AGPY---DFVLAIGDDTTDEDMFRALPE--TAITVKV 699 (726)
T ss_pred HHHHHHhcC-CCeEEEECCeEEEEEEC-CCCHHHHHHHHHh--cCCC---CEEEEECCCCChHHHHHhccc--CceEEEE
Confidence 444454443 35778889999999999 9999999999999 4544 389999999999999999842 3799999
Q ss_pred cCCCCCCcceEEeCCHHHHHHHHHHHHH
Q 017025 343 SKTPKETHASYSLQEPSEVKDFLRRLVQ 370 (379)
Q Consensus 343 gna~~~t~A~y~l~d~~eV~~~L~~Lv~ 370 (379)
|| +++.|+|++++++||+++|++|+.
T Consensus 700 G~--~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 700 GP--GESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred CC--CCCcceEeCCCHHHHHHHHHHHhc
Confidence 98 579999999999999999999874
No 9
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=9.7e-33 Score=299.37 Aligned_cols=242 Identities=24% Similarity=0.354 Sum_probs=193.2
Q ss_pred HHHHHhc-cCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc--CCEEEEcCCChhhHHhhccc-cCceEEec
Q 017025 112 EEIVNAS-KGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY--FPTAIVTGRCRDKVFSFVKL-AGLYYAGS 187 (379)
Q Consensus 112 ~~~~~~~-~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~--~~vaIaTGR~~~~l~~~~~l-~~l~li~~ 187 (379)
+.+++++ +.++++||+||||||++.... ...++++++++|++|++. ..|+|+|||++..+.++++. +.++++|+
T Consensus 585 ~~i~~~y~~~~~rlI~LDyDGTLlp~~~~--~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaE 662 (854)
T PLN02205 585 EHIVSAYKRTTTRAILLDYDGTLMPQASI--DKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAE 662 (854)
T ss_pred HHHHHHHHhhcCeEEEEecCCcccCCccc--cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEe
Confidence 5677777 778999999999999987532 457889999999999766 58999999999999999965 56899999
Q ss_pred CCceEecCCCccccccCCCccccCC--CccchhHHHHHHHHHHHHhccCCCcEEEeccceEEEeeccCCcchH----HHH
Q 017025 188 HGMDIEGPSKKRRYKKGNHGVLCQP--ASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSVHFRCVDENSW----GTL 261 (379)
Q Consensus 188 nGa~I~~~~~~~~~~~~~e~~~~~~--~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~~~~l~~~~r~vd~~~~----~~l 261 (379)
||++++.+++.. |....+ ...|... +...+..++++.||+++|.+++++.+|||.++++.. .++
T Consensus 663 HG~~ir~~~~~~-------w~~~~~~~~~~w~~~---v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el 732 (854)
T PLN02205 663 HGYFLRLKRDVE-------WETCVPVADCSWKQI---AEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKEL 732 (854)
T ss_pred CCEEEEeCCCce-------eeecchhhhHHHHHH---HHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHH
Confidence 999998775432 211111 1234333 344456667889999999999999999999976432 355
Q ss_pred HHHHHHHHhhCCCcEEEeCCeEEEEEcCCCCCHHHHHHHHHHH---hCCCCCCCccEEEEcCCcCCHHHHHHHHhcCC--
Q 017025 262 AEQVRVVLDKYPKLTLTQGRMVLEIRPTIKWDKGKALEFLLEA---LGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQ-- 336 (379)
Q Consensus 262 ~e~v~~vl~~~p~l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~---lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~-- 336 (379)
.+.++..+...+ +.+.+|++++||+|+ ++|||.|+++|++. +|++. ++++||||+.||++||+++.....
T Consensus 733 ~~~l~~~l~~~~-~~v~~G~~vvEV~p~-gvnKG~Al~~Ll~~~~~~g~~~---d~vl~~GDD~nDedMF~~~~~~~~g~ 807 (854)
T PLN02205 733 LDHLESVLANEP-VTVKSGQNIVEVKPQ-GVSKGLVAKRLLSIMQERGMLP---DFVLCIGDDRSDEDMFEVITSSMAGP 807 (854)
T ss_pred HHHHHHHHhcCc-eEEEECCcEEEEEeC-CCCHHHHHHHHHHHHHhcCCCc---ccEEEEcCCccHHHHHHHhhhhccCC
Confidence 566666666654 778899999999999 99999999999865 57665 389999999999999999974211
Q ss_pred -------eEEEEecCCCCCCcceEEeCCHHHHHHHHHHHHHhh
Q 017025 337 -------GFGILVSKTPKETHASYSLQEPSEVKDFLRRLVQWK 372 (379)
Q Consensus 337 -------G~gVaVgna~~~t~A~y~l~d~~eV~~~L~~Lv~~~ 372 (379)
+|+|.||. +++.|.|.++++++|.++|+.|+...
T Consensus 808 ~~~~~~~~~~v~VG~--~~S~A~y~L~d~~eV~~lL~~L~~~~ 848 (854)
T PLN02205 808 SIAPRAEVFACTVGQ--KPSKAKYYLDDTAEIVRLMQGLASVS 848 (854)
T ss_pred cccccccceeEEECC--CCccCeEecCCHHHHHHHHHHHHhcc
Confidence 48999985 67999999999999999999998643
No 10
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=4.7e-32 Score=293.41 Aligned_cols=256 Identities=15% Similarity=0.200 Sum_probs=196.2
Q ss_pred CCccccHHHHHHhc-cCCcEEEEEeCCCccCCCCCC---CCcccCCHHHHHHHHHHHhc--CCEEEEcCCChhhHHhhcc
Q 017025 105 PSALSKFEEIVNAS-KGKKIVMFLDYDGTLAPIVED---PDRAFMTNEMREAVRDVARY--FPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 105 psal~~f~~~~~~~-~~k~~liflD~DGTLl~~~~~---pd~~~~s~~~~~aL~~L~~~--~~vaIaTGR~~~~l~~~~~ 178 (379)
++.| ..+++.+++ +++++++||||||||+++..+ |..+.++++++++|++|++. ..++|+|||+.+.+.++++
T Consensus 490 ~~~l-~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 568 (797)
T PLN03063 490 PLEL-PEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFG 568 (797)
T ss_pred CCCC-CHHHHHHHHHhccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhC
Confidence 3444 446677776 778899999999999998764 46678999999999999998 5899999999999999998
Q ss_pred ccCceEEecCCceEecCCCccccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEeccceEEEeeccCCcchH
Q 017025 179 LAGLYYAGSHGMDIEGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSVHFRCVDENSW 258 (379)
Q Consensus 179 l~~l~li~~nGa~I~~~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~~~~l~~~~r~vd~~~~ 258 (379)
...++++|+||++++.+++.+. .. ........| .+.+...++.+++++||+++|.+++++.||||.++++..
T Consensus 569 ~~~l~l~aeHG~~~r~~~~~w~-~~----~~~~~~~~w---~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g 640 (797)
T PLN03063 569 EYNIWLAAENGMFLRHTSGEWV-TT----MPEHMNLDW---VDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFG 640 (797)
T ss_pred CCCCcEEEeCCEEEecCCCcee-ec----cccccChhH---HHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHH
Confidence 8789999999999987654321 00 000112234 345667777778899999999999999999999976532
Q ss_pred -HHHHHHHHHHHhh---CCCcEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCC---CCCCCccEEEEcCCc-CCHHHHHH
Q 017025 259 -GTLAEQVRVVLDK---YPKLTLTQGRMVLEIRPTIKWDKGKALEFLLEALGY---ANSKDVVPVYIGDDR-TDEDAFKV 330 (379)
Q Consensus 259 -~~l~e~v~~vl~~---~p~l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~---~~~~~~~vi~~GD~~-NDe~mf~~ 330 (379)
....+.+..+.+. .+++++..|++++||+|. ++|||.|++.|++.+.. .....++++|+||+. .||+||++
T Consensus 641 ~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~-gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~ 719 (797)
T PLN03063 641 RAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAI-GVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTF 719 (797)
T ss_pred HHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcC-CCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHh
Confidence 2222222222222 236899999999999999 99999999999998621 111235999999985 59999999
Q ss_pred HHhcC----------------------------CeEEEEecCCCCCCcceEEeCCHHHHHHHHHHHHHhh
Q 017025 331 LRNRG----------------------------QGFGILVSKTPKETHASYSLQEPSEVKDFLRRLVQWK 372 (379)
Q Consensus 331 ~~~~~----------------------------~G~gVaVgna~~~t~A~y~l~d~~eV~~~L~~Lv~~~ 372 (379)
+.... +-|+|.||. ++|.|.|.+++++||.++|..|+...
T Consensus 720 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~--~~s~A~y~l~~~~eV~~lL~~l~~~~ 787 (797)
T PLN03063 720 FEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQ--ARTKARYVLDSSNDVVSLLHKLAVAN 787 (797)
T ss_pred ccccccccccccccccccccccccccccccccCceEEEEECC--CCccCeecCCCHHHHHHHHHHHhccC
Confidence 86421 117899986 68999999999999999999998643
No 11
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=1.9e-31 Score=288.81 Aligned_cols=257 Identities=18% Similarity=0.274 Sum_probs=198.4
Q ss_pred CCCccccHHHHHHhc-cCCcEEEEEeCCCccCCCCCCCC---------cccCCHHHHHHHHHHHhc--CCEEEEcCCChh
Q 017025 104 HPSALSKFEEIVNAS-KGKKIVMFLDYDGTLAPIVEDPD---------RAFMTNEMREAVRDVARY--FPTAIVTGRCRD 171 (379)
Q Consensus 104 ~psal~~f~~~~~~~-~~k~~liflD~DGTLl~~~~~pd---------~~~~s~~~~~aL~~L~~~--~~vaIaTGR~~~ 171 (379)
++..| ..+.+.+++ +++++++||||||||++++++|+ .+.++++++++|++|++. ..|+|+|||+++
T Consensus 573 ~~~~l-~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~ 651 (934)
T PLN03064 573 VPPQL-PPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRS 651 (934)
T ss_pred cCCCC-CHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHH
Confidence 33444 456677766 77899999999999999999987 567899999999999998 589999999999
Q ss_pred hHHhhccccCceEEecCCceEecCCCccccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEeccceEEEeec
Q 017025 172 KVFSFVKLAGLYYAGSHGMDIEGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSVHFR 251 (379)
Q Consensus 172 ~l~~~~~l~~l~li~~nGa~I~~~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~~~~l~~~~r 251 (379)
.+..+++...++++|+||++++.+++.+... .......+| .+.+...++.+++++||+++|.+++++.||||
T Consensus 652 ~Le~~fg~~~L~LaAEHG~~~R~~~~~w~~~-----~~~~~~~~W---~~~v~~ile~~~eRtPGS~IE~K~~SLawHYR 723 (934)
T PLN03064 652 VLDENFGEFDMWLAAENGMFLRHTKGEWMTT-----MPEHLNMDW---VDSVKHVFEYFTERTPRSHFETRETSLVWNYK 723 (934)
T ss_pred HHHHHhCCCCceEEeeCCeEEecCCCcceec-----cccccchHH---HHHHHHHHHHHHhcCCCcEEEEcCcEEEEEec
Confidence 9999998778999999999998775542100 000112234 34566677777889999999999999999999
Q ss_pred cCCcchH----HHHHHHHH-HHHhhCCCcEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCC---CCCccEEEEcCCcC
Q 017025 252 CVDENSW----GTLAEQVR-VVLDKYPKLTLTQGRMVLEIRPTIKWDKGKALEFLLEALGYAN---SKDVVPVYIGDDRT 323 (379)
Q Consensus 252 ~vd~~~~----~~l~e~v~-~vl~~~p~l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~---~~~~~vi~~GD~~N 323 (379)
.+|++.. .++.+++. ..+.. +.+++..|++++||+|. ++|||.|++.|++.+.-+. ...++++|+||+.+
T Consensus 724 ~ADpe~g~~qA~el~~~L~~~~~~~-~~v~V~~Gk~VVEVrP~-gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~ 801 (934)
T PLN03064 724 YADVEFGRLQARDMLQHLWTGPISN-AAVDVVQGSRSVEVRPV-GVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLG 801 (934)
T ss_pred CCChhhHHHHHHHHHHHHHhhhccC-CCcEEEeCCeEEEEEcC-CCCHHHHHHHHHHhhhhccccCCCCCEEEEeCCCCC
Confidence 9976532 23333331 12222 36899999999999999 9999999999999763111 12469999999875
Q ss_pred -CHHHHHHHHhc--------------------------------------------------------------------
Q 017025 324 -DEDAFKVLRNR-------------------------------------------------------------------- 334 (379)
Q Consensus 324 -De~mf~~~~~~-------------------------------------------------------------------- 334 (379)
||+||+++..-
T Consensus 802 ~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (934)
T PLN03064 802 KDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKNSQGKKQRSLLSSAKSGVNHAASHGSDRRPS 881 (934)
T ss_pred CcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccccccccCCcccccccccccccccCCccccCC
Confidence 99999997530
Q ss_pred -------------CCeEEEEecCCCCCCcceEEeCCHHHHHHHHHHHHHhhh
Q 017025 335 -------------GQGFGILVSKTPKETHASYSLQEPSEVKDFLRRLVQWKR 373 (379)
Q Consensus 335 -------------~~G~gVaVgna~~~t~A~y~l~d~~eV~~~L~~Lv~~~~ 373 (379)
.+-|+++||. +.+.|.|.+++.++|..||..|.+...
T Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (934)
T PLN03064 882 PEKIGWSVLDLKGENYFSCAVGR--KRSNARYLLGSSDDVVSFLKELANASS 931 (934)
T ss_pred ccccccccccccCcceEEEEecc--ccccceeecCCHHHHHHHHHHHhcccc
Confidence 0126777774 679999999999999999999987654
No 12
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.97 E-value=1.6e-29 Score=240.61 Aligned_cols=223 Identities=23% Similarity=0.309 Sum_probs=151.7
Q ss_pred CcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc---ccCceEEecCCceEecCC
Q 017025 121 KKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK---LAGLYYAGSHGMDIEGPS 196 (379)
Q Consensus 121 k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~---l~~l~li~~nGa~I~~~~ 196 (379)
..+++|+|+||||+.. +..++++++++|++++++ ++|+|+|||++..+..++. +.. ++|++||+.|+.+
T Consensus 2 ~~kli~~DlDGTLl~~-----~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~-~~I~~NGa~i~~~- 74 (264)
T COG0561 2 MIKLLAFDLDGTLLDS-----NKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG-PLITFNGALIYNG- 74 (264)
T ss_pred CeeEEEEcCCCCccCC-----CCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc-cEEEeCCeEEecC-
Confidence 3589999999999994 456999999999999998 6999999999999998874 333 7999999999998
Q ss_pred CccccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEeccceE-----------------EEeeccCCcc---
Q 017025 197 KKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCL-----------------SVHFRCVDEN--- 256 (379)
Q Consensus 197 ~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~~~~l-----------------~~~~r~vd~~--- 256 (379)
++..+. .+.. ...+.++.+.+.+. ............... .+........
T Consensus 75 ~~~i~~--------~~l~--~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (264)
T COG0561 75 GELLFQ--------KPLS--REDVEELLELLEDF-QGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDN 143 (264)
T ss_pred CcEEee--------ecCC--HHHHHHHHHHHHhc-cCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcc
Confidence 432111 1111 13445555555332 111111111110000 0000000000
Q ss_pred ------hHHHHHHHHH-HHHhhCC--CcEEEeCC-eEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHH
Q 017025 257 ------SWGTLAEQVR-VVLDKYP--KLTLTQGR-MVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDED 326 (379)
Q Consensus 257 ------~~~~l~e~v~-~vl~~~p--~l~v~~g~-~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~ 326 (379)
...+..+.+. .+.+.++ .+.+.++. .++||.|+ |+|||.||++|++.+|++.+ ++++|||+.||++
T Consensus 144 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~-g~~K~~al~~l~~~lgi~~~---~v~afGD~~ND~~ 219 (264)
T COG0561 144 KIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPISLDITPK-GVSKGYALQRLAKLLGIKLE---EVIAFGDSTNDIE 219 (264)
T ss_pred eEEEEecChHhHHHHHHHHhhhccccceEEEEcCCceEEEecC-CCchHHHHHHHHHHhCCCHH---HeEEeCCccccHH
Confidence 0012222222 2333344 34555554 44999999 99999999999999999864 8999999999999
Q ss_pred HHHHHHhcCCeEEEEecCCCC--CCcceEEe--CCHHHHHHHHHHHHH
Q 017025 327 AFKVLRNRGQGFGILVSKTPK--ETHASYSL--QEPSEVKDFLRRLVQ 370 (379)
Q Consensus 327 mf~~~~~~~~G~gVaVgna~~--~t~A~y~l--~d~~eV~~~L~~Lv~ 370 (379)
||+.+ |+||+|+|++. +..|+|++ ++.++|.++|++++.
T Consensus 220 Ml~~a-----g~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 220 MLEVA-----GLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred HHHhc-----CeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 99998 99999999964 47888875 467889999999864
No 13
>PRK10976 putative hydrolase; Provisional
Probab=99.97 E-value=2.8e-29 Score=239.00 Aligned_cols=223 Identities=16% Similarity=0.222 Sum_probs=146.0
Q ss_pred EEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc-c-cCceEEecCCceEecCCCcc
Q 017025 123 IVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK-L-AGLYYAGSHGMDIEGPSKKR 199 (379)
Q Consensus 123 ~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~-l-~~l~li~~nGa~I~~~~~~~ 199 (379)
+++|+|+||||++. ...++++++++|++++++ +.|+|||||+...+..++. + ...++|++||+.|+...+..
T Consensus 3 kli~~DlDGTLl~~-----~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 77 (266)
T PRK10976 3 QVVASDLDGTLLSP-----DHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNL 77 (266)
T ss_pred eEEEEeCCCCCcCC-----CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCE
Confidence 68999999999983 357999999999999999 6999999999999887653 2 23478999999999754432
Q ss_pred ccccCCCccccCCCccchhHHHHHHHHHHHHh------ccCCCcEEEec-c-----c-----eEEEe-eccCCcch----
Q 017025 200 RYKKGNHGVLCQPASEFLPMINEVYQTLLEKT------KSIPGAKVENN-K-----F-----CLSVH-FRCVDENS---- 257 (379)
Q Consensus 200 ~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~------~~~~g~~iE~~-~-----~-----~l~~~-~r~vd~~~---- 257 (379)
.+.. +.. .+.+.++++.+.+.. ....+.+.... . + ..... ........
T Consensus 78 i~~~--------~l~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki 147 (266)
T PRK10976 78 IFSH--------NLD--RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKV 147 (266)
T ss_pred ehhh--------cCC--HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEE
Confidence 1110 000 122333443332110 00001111000 0 0 00000 00000000
Q ss_pred -----HHHHHHHHHHHH-hhCC-CcEEE-eCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHH
Q 017025 258 -----WGTLAEQVRVVL-DKYP-KLTLT-QGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFK 329 (379)
Q Consensus 258 -----~~~l~e~v~~vl-~~~p-~l~v~-~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~ 329 (379)
-.+..+.+...+ +.+. .+.++ ++..++||.|+ ++|||.||++|++++|++.+ ++++|||+.||++||+
T Consensus 148 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~-gvsKg~al~~l~~~lgi~~~---~viafGD~~NDi~Ml~ 223 (266)
T PRK10976 148 FFTCDSHEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAG-GVSKGHALEAVAKKLGYSLK---DCIAFGDGMNDAEMLS 223 (266)
T ss_pred EEEcCCHHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcC-CCChHHHHHHHHHHcCCCHH---HeEEEcCCcccHHHHH
Confidence 011112222222 2222 35554 45679999999 99999999999999999875 8999999999999999
Q ss_pred HHHhcCCeEEEEecCCCC--CCcce--EEe--CCHHHHHHHHHHHH
Q 017025 330 VLRNRGQGFGILVSKTPK--ETHAS--YSL--QEPSEVKDFLRRLV 369 (379)
Q Consensus 330 ~~~~~~~G~gVaVgna~~--~t~A~--y~l--~d~~eV~~~L~~Lv 369 (379)
.+ |+||+|+|+.. +..|+ +++ ++.++|.++|++++
T Consensus 224 ~a-----g~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 224 MA-----GKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred Hc-----CCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 98 99999999985 46665 666 46788999999986
No 14
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.97 E-value=3.2e-29 Score=239.01 Aligned_cols=224 Identities=18% Similarity=0.218 Sum_probs=148.0
Q ss_pred cEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc---cc--CceEEecCCceEecC
Q 017025 122 KIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK---LA--GLYYAGSHGMDIEGP 195 (379)
Q Consensus 122 ~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~---l~--~l~li~~nGa~I~~~ 195 (379)
.+++|+|+||||++. ...++++++++|++|+++ +.|+|||||++..+..++. +. ..|+|++||+.|+.+
T Consensus 3 ~kli~~DlDGTLl~~-----~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 3 IKLIAIDMDGTLLLP-----DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKA 77 (270)
T ss_pred eEEEEEecCCcCcCC-----CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEEC
Confidence 479999999999983 457999999999999999 6999999999999887653 32 247999999999964
Q ss_pred C-CccccccCCCccccCCCccchhHHHHHHHHHHHHhc-----cCCCcEEEeccce-----------EEEeecc---CCc
Q 017025 196 S-KKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTK-----SIPGAKVENNKFC-----------LSVHFRC---VDE 255 (379)
Q Consensus 196 ~-~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~-----~~~g~~iE~~~~~-----------l~~~~r~---vd~ 255 (379)
. ++..+. .+.. .+.+.++.+.+.+.-. ...+.+....... ....+.. ..+
T Consensus 78 ~~~~~i~~--------~~l~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (270)
T PRK10513 78 ADGETVAQ--------TALS--YDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDP 147 (270)
T ss_pred CCCCEEEe--------cCCC--HHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccc
Confidence 3 332111 0100 1223344444332100 0011111100000 0000000 000
Q ss_pred c----------hHHHHHHHHHHHHhhC-CCcEEE-eCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcC
Q 017025 256 N----------SWGTLAEQVRVVLDKY-PKLTLT-QGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRT 323 (379)
Q Consensus 256 ~----------~~~~l~e~v~~vl~~~-p~l~v~-~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~N 323 (379)
. .-..+.+..+.+.+.+ ..+.+. ++..++||.|+ |+|||.||++|++++|++.+ ++++|||+.|
T Consensus 148 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~-gvsKg~al~~l~~~~gi~~~---~v~afGD~~N 223 (270)
T PRK10513 148 NLQFPKVMMIDEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDK-RVNKGTGVKSLAEHLGIKPE---EVMAIGDQEN 223 (270)
T ss_pred cCCceEEEEeCCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCC-CCChHHHHHHHHHHhCCCHH---HEEEECCchh
Confidence 0 0011111111222222 235554 56779999999 99999999999999999975 8999999999
Q ss_pred CHHHHHHHHhcCCeEEEEecCCCC--CCcceEEeC--CHHHHHHHHHHHH
Q 017025 324 DEDAFKVLRNRGQGFGILVSKTPK--ETHASYSLQ--EPSEVKDFLRRLV 369 (379)
Q Consensus 324 De~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l~--d~~eV~~~L~~Lv 369 (379)
|++||+.+ |+||+|+|++. +..|+|++. +.++|.++|++++
T Consensus 224 Di~Ml~~a-----g~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 224 DIAMIEYA-----GVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred hHHHHHhC-----CceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 99999998 99999999985 488999984 6678999999876
No 15
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.96 E-value=5.5e-29 Score=238.07 Aligned_cols=224 Identities=14% Similarity=0.194 Sum_probs=146.6
Q ss_pred EEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhccc--cCceEEecCCceEecCCCcc
Q 017025 123 IVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVKL--AGLYYAGSHGMDIEGPSKKR 199 (379)
Q Consensus 123 ~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~l--~~l~li~~nGa~I~~~~~~~ 199 (379)
+++|+|+||||++. ...++++++++|++|+++ +.|+|||||+...+..++.. ...++|++||+.|+...+..
T Consensus 3 kli~~DlDGTLl~~-----~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~ 77 (272)
T PRK15126 3 RLAAFDMDGTLLMP-----DHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGEL 77 (272)
T ss_pred cEEEEeCCCcCcCC-----CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCE
Confidence 68999999999983 347999999999999999 69999999999998887632 23478999999999754432
Q ss_pred ccccCCCccccCCCccchhHHHHHHHHHHHHhc-----cCCCcEEEec-c----------ceEEE-eeccCCcch-----
Q 017025 200 RYKKGNHGVLCQPASEFLPMINEVYQTLLEKTK-----SIPGAKVENN-K----------FCLSV-HFRCVDENS----- 257 (379)
Q Consensus 200 ~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~-----~~~g~~iE~~-~----------~~l~~-~~r~vd~~~----- 257 (379)
.+.. +.. .+.+.++++.+.+.-. ...+.+.... . ..... .+.......
T Consensus 78 l~~~--------~i~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~ 147 (272)
T PRK15126 78 LHRQ--------DLP--ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKIC 147 (272)
T ss_pred EEee--------cCC--HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEE
Confidence 1111 000 1223344433322100 0000000000 0 00000 000000000
Q ss_pred ---HHHHHHHHHHHHh-hCC-CcEEE-eCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 258 ---WGTLAEQVRVVLD-KYP-KLTLT-QGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 258 ---~~~l~e~v~~vl~-~~p-~l~v~-~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
-.+..++++..++ .++ .+.+. ++..++||.|+ ++|||+||++|++++|++.+ ++++|||+.||++||+.+
T Consensus 148 ~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~-g~sKg~al~~l~~~~gi~~~---~v~afGD~~NDi~Ml~~a 223 (272)
T PRK15126 148 FCGDHDDLTRLQIQLNEALGERAHLCFSATDCLEVLPV-GCNKGAALAVLSQHLGLSLA---DCMAFGDAMNDREMLGSV 223 (272)
T ss_pred EECCHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEeecC-CCChHHHHHHHHHHhCCCHH---HeEEecCCHHHHHHHHHc
Confidence 0111122333332 222 35554 45679999999 99999999999999999875 899999999999999998
Q ss_pred HhcCCeEEEEecCCCC--CCcceE--Ee--CCHHHHHHHHHHHHH
Q 017025 332 RNRGQGFGILVSKTPK--ETHASY--SL--QEPSEVKDFLRRLVQ 370 (379)
Q Consensus 332 ~~~~~G~gVaVgna~~--~t~A~y--~l--~d~~eV~~~L~~Lv~ 370 (379)
|+||+|+|+.. +..|+| ++ ++.++|.++|++++.
T Consensus 224 -----g~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 224 -----GRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred -----CCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 99999999975 466765 55 467889999999874
No 16
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.96 E-value=1.4e-28 Score=228.80 Aligned_cols=214 Identities=20% Similarity=0.262 Sum_probs=147.1
Q ss_pred cEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhc---cccCceEEecCCceEecCC-
Q 017025 122 KIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFV---KLAGLYYAGSHGMDIEGPS- 196 (379)
Q Consensus 122 ~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~---~l~~l~li~~nGa~I~~~~- 196 (379)
.+++|+||||||++. ...++++++++|++|++. ++|+|||||+...+..++ +++ .++|++||+.|+.+.
T Consensus 3 ~kli~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~-~~~i~~nGa~i~~~~~ 76 (230)
T PRK01158 3 IKAIAIDIDGTITDK-----DRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS-GPVIAENGGVISVGFD 76 (230)
T ss_pred eeEEEEecCCCcCCC-----CCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC-CcEEEecCeEEEEcCC
Confidence 379999999999983 346999999999999998 699999999999888765 333 479999999998763
Q ss_pred CccccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEe-ccceE-E-EeeccCCcchHHHHHHHHHHHHhhCC
Q 017025 197 KKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVEN-NKFCL-S-VHFRCVDENSWGTLAEQVRVVLDKYP 273 (379)
Q Consensus 197 ~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~-~~~~l-~-~~~r~vd~~~~~~l~e~v~~vl~~~p 273 (379)
+...+ ..+. +...++.+.+.+........+... ..+.. . ..++ .... +.+.+.++.+.
T Consensus 77 ~~~~~--------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~l~~~~ 137 (230)
T PRK01158 77 GKRIF--------LGDI----EECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRR---TVPV----EEVRELLEELG 137 (230)
T ss_pred CCEEE--------Ecch----HHHHHHHHHHHHhccccceeeecCCcccccceeeecc---cccH----HHHHHHHHHcC
Confidence 22111 1111 222334443332211100000000 00000 0 0111 1111 22333444432
Q ss_pred -CcEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCc
Q 017025 274 -KLTLTQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETH 350 (379)
Q Consensus 274 -~l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~ 350 (379)
.+.+..+..++||.|+ ++|||.|+++|++++|++.+ ++++|||+.||++||+.+ |++|+|+|++. +..
T Consensus 138 ~~~~~~~~~~~~ei~~~-~~~Kg~al~~l~~~~~i~~~---~~i~~GD~~NDi~m~~~a-----g~~vam~Na~~~vk~~ 208 (230)
T PRK01158 138 LDLEIVDSGFAIHIKSP-GVNKGTGLKKLAELMGIDPE---EVAAIGDSENDLEMFEVA-----GFGVAVANADEELKEA 208 (230)
T ss_pred CcEEEEecceEEEEeeC-CCChHHHHHHHHHHhCCCHH---HEEEECCchhhHHHHHhc-----CceEEecCccHHHHHh
Confidence 3555556678999999 99999999999999999875 899999999999999998 99999999985 478
Q ss_pred ceEEeC--CHHHHHHHHHHHH
Q 017025 351 ASYSLQ--EPSEVKDFLRRLV 369 (379)
Q Consensus 351 A~y~l~--d~~eV~~~L~~Lv 369 (379)
|+|++. +.++|.++|++++
T Consensus 209 a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 209 ADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred cceEecCCCcChHHHHHHHHh
Confidence 999984 6678999999875
No 17
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.96 E-value=2e-28 Score=234.57 Aligned_cols=226 Identities=16% Similarity=0.248 Sum_probs=150.3
Q ss_pred CcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc---ccCceEEecCCceEecCC
Q 017025 121 KKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK---LAGLYYAGSHGMDIEGPS 196 (379)
Q Consensus 121 k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~---l~~l~li~~nGa~I~~~~ 196 (379)
.+++||+|+||||++. +..++++++++|++|+++ ++|+|||||+...+..++. +...++|++||+.|+.+.
T Consensus 6 ~~~lI~~DlDGTLL~~-----~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~ 80 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS-----HTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDE 80 (271)
T ss_pred CCeEEEEeCccCCcCC-----CCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecC
Confidence 4689999999999982 346899999999999999 6999999999999988753 333579999999999764
Q ss_pred CccccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEe----------------------ccceEEEeeccCC
Q 017025 197 KKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVEN----------------------NKFCLSVHFRCVD 254 (379)
Q Consensus 197 ~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~----------------------~~~~l~~~~r~vd 254 (379)
+... ... ......... .+.+.++++.+.+.. ...-..... ......+.+.. +
T Consensus 81 ~~~~-~~~-~~~~~~~l~--~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 154 (271)
T PRK03669 81 QWQD-HPD-FPRIISGIS--HGEIRQVLNTLREKE-GFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRD-S 154 (271)
T ss_pred cccC-CCC-ceEeecCCC--HHHHHHHHHHHHHhc-CCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecC-C
Confidence 3110 000 000000000 123344444443220 000000000 00001111110 1
Q ss_pred cchHHHHHHHHHHHHhhCCCcEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCC---CCCCCccEEEEcCCcCCHHHHHHH
Q 017025 255 ENSWGTLAEQVRVVLDKYPKLTLTQGRMVLEIRPTIKWDKGKALEFLLEALGY---ANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 255 ~~~~~~l~e~v~~vl~~~p~l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~---~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
.+..+++.+.++.. .+.++.+..++||.|+ ++|||.||++|++++|+ +.+ ++++|||+.||++||+.+
T Consensus 155 ----~~~~~~~~~~l~~~-~~~~~~~~~~iEi~~~-g~sKg~al~~l~~~lgi~~~~~~---~viafGDs~NDi~Ml~~a 225 (271)
T PRK03669 155 ----DERMAQFTARLAEL-GLQFVQGARFWHVLDA-SAGKDQAANWLIATYQQLSGTRP---TTLGLGDGPNDAPLLDVM 225 (271)
T ss_pred ----HHHHHHHHHHHHHC-CCEEEecCeeEEEecC-CCCHHHHHHHHHHHHHhhcCCCc---eEEEEcCCHHHHHHHHhC
Confidence 11222333333332 5677666679999999 99999999999999999 764 899999999999999998
Q ss_pred HhcCCeEEEEecCCCC--------CCcceEEeC--CHHHHHHHHHHHHHh
Q 017025 332 RNRGQGFGILVSKTPK--------ETHASYSLQ--EPSEVKDFLRRLVQW 371 (379)
Q Consensus 332 ~~~~~G~gVaVgna~~--------~t~A~y~l~--d~~eV~~~L~~Lv~~ 371 (379)
|+||+|+|+.. +..|+|+++ +++++.+.|++++..
T Consensus 226 -----g~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 226 -----DYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred -----CEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 99999997662 236889886 667999999998853
No 18
>PLN02887 hydrolase family protein
Probab=99.95 E-value=3.6e-27 Score=246.34 Aligned_cols=232 Identities=20% Similarity=0.258 Sum_probs=152.6
Q ss_pred HHHhccCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc---ccC--------
Q 017025 114 IVNASKGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK---LAG-------- 181 (379)
Q Consensus 114 ~~~~~~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~---l~~-------- 181 (379)
.++.++.+.++||+|+||||++. ...++++++++|++++++ +.|+|||||++..+..++. +..
T Consensus 300 ~~~~~~~~iKLIa~DLDGTLLn~-----d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~ 374 (580)
T PLN02887 300 SLRFYKPKFSYIFCDMDGTLLNS-----KSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISES 374 (580)
T ss_pred chhhhccCccEEEEeCCCCCCCC-----CCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeec
Confidence 34557888999999999999983 457999999999999999 6999999999999887653 221
Q ss_pred ceEEecCCceEecCCCccccccCCCccccCCCccchhHHHHHHHHHHHHhc-----cCCCcEEEeccceEE-Ee--ec--
Q 017025 182 LYYAGSHGMDIEGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTK-----SIPGAKVENNKFCLS-VH--FR-- 251 (379)
Q Consensus 182 l~li~~nGa~I~~~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~-----~~~g~~iE~~~~~l~-~~--~r-- 251 (379)
.++|++||+.|+...+...+.. ... .+.+.++++.+.+.-. ...+.+......... .+ +.
T Consensus 375 ~p~I~~NGA~I~d~~g~~I~~~--------~L~--~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~ 444 (580)
T PLN02887 375 SPGVFLQGLLVYGRQGREIYRS--------NLD--QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEP 444 (580)
T ss_pred ccEEeecCeEEEECCCcEEEEE--------eCC--HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccc
Confidence 2467789999986544322111 000 1233444444332100 000111100000000 00 00
Q ss_pred ---cCC-------cc---------hHHHHHHHHHHHH-hhC-CCcEEE-eCCeEEEEEcCCCCCHHHHHHHHHHHhCCCC
Q 017025 252 ---CVD-------EN---------SWGTLAEQVRVVL-DKY-PKLTLT-QGRMVLEIRPTIKWDKGKALEFLLEALGYAN 309 (379)
Q Consensus 252 ---~vd-------~~---------~~~~l~e~v~~vl-~~~-p~l~v~-~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~ 309 (379)
.+. .. .-....+.+...+ +.+ ..+.++ ++..++||.|+ ++|||.||++|++++|++.
T Consensus 445 ~~~~i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~-gvSKG~ALk~L~e~lGI~~ 523 (580)
T PLN02887 445 KAEIMSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPP-GTSKGNGVKMLLNHLGVSP 523 (580)
T ss_pred cccccCCHHHhhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecC-CCCHHHHHHHHHHHcCCCH
Confidence 000 00 0011112222222 222 235554 56679999999 9999999999999999997
Q ss_pred CCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEeC--CHHHHHHHHHHHH
Q 017025 310 SKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSLQ--EPSEVKDFLRRLV 369 (379)
Q Consensus 310 ~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l~--d~~eV~~~L~~Lv 369 (379)
+ ++++|||+.||++||+.+ |+||+|+|+.. +..|+|++. +.++|.++|++++
T Consensus 524 e---eviAFGDs~NDIeMLe~A-----G~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 524 D---EIMAIGDGENDIEMLQLA-----SLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred H---HEEEEecchhhHHHHHHC-----CCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 5 899999999999999998 99999999985 588999984 6778999999874
No 19
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.95 E-value=1.1e-27 Score=219.17 Aligned_cols=197 Identities=24% Similarity=0.359 Sum_probs=143.0
Q ss_pred EEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhccccCceEEecCCceEecCCCccccc
Q 017025 124 VMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVKLAGLYYAGSHGMDIEGPSKKRRYK 202 (379)
Q Consensus 124 liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~l~~l~li~~nGa~I~~~~~~~~~~ 202 (379)
++++||||||++. +...++++++++|++|+++ ..++|+|||+...+..+++..+.+++++||+.|+.+++. .+.
T Consensus 1 li~~D~DgTL~~~----~~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~-~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLDP----NAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEI-LYI 75 (204)
T ss_pred CEEEeCcCCCcCC----CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEE-EEE
Confidence 5899999999983 2257999999999999999 699999999999999988655578999999999976432 111
Q ss_pred cCCCccccCCCccchhHH---HHHHHHHHHHhccCCCcEEEeccceEEEeeccC--CcchHHHHHHHHHHHHhhCCCcEE
Q 017025 203 KGNHGVLCQPASEFLPMI---NEVYQTLLEKTKSIPGAKVENNKFCLSVHFRCV--DENSWGTLAEQVRVVLDKYPKLTL 277 (379)
Q Consensus 203 ~~~e~~~~~~~~~~~~~i---~ev~~~l~~~~~~~~g~~iE~~~~~l~~~~r~v--d~~~~~~l~e~v~~vl~~~p~l~v 277 (379)
. +...|...+ +++...+..+....++..+|.+..++.++++.. .+.....+.+.++.....++++.+
T Consensus 76 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (204)
T TIGR01484 76 E--------PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEA 147 (204)
T ss_pred c--------ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEE
Confidence 0 111111111 122222222223456777788888899998864 111122333333332211356777
Q ss_pred E-eCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEe
Q 017025 278 T-QGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILV 342 (379)
Q Consensus 278 ~-~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaV 342 (379)
. ++..++||+|+ +++||.|++++++++|++.+ ++++|||+.||++||+.+ |++|+|
T Consensus 148 ~~s~~~~~ev~p~-~~~K~~~~~~~~~~~~~~~~---~~~~~GD~~nD~~~~~~~-----~~~vam 204 (204)
T TIGR01484 148 IYVGKTDLEVLPA-GVDKGSALQALLKELNGKRD---EILAFGDSGNDEEMFEVA-----GLAVAV 204 (204)
T ss_pred EEecCCEEEEecC-CCChHHHHHHHHHHhCCCHH---HEEEEcCCHHHHHHHHHc-----CCceEC
Confidence 7 68899999999 99999999999999998764 899999999999999998 899887
No 20
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.95 E-value=4e-27 Score=218.51 Aligned_cols=214 Identities=25% Similarity=0.386 Sum_probs=143.9
Q ss_pred EEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcccc--CceEEecCCceEecCCCcccc
Q 017025 125 MFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVKLA--GLYYAGSHGMDIEGPSKKRRY 201 (379)
Q Consensus 125 iflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~l~--~l~li~~nGa~I~~~~~~~~~ 201 (379)
||+|+||||++. ...++++++++|++|+++ +.++|+|||++..+.++++.. ..++|++||+.|..+.++..+
T Consensus 1 i~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~ 75 (254)
T PF08282_consen 1 IFSDLDGTLLNS-----DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILY 75 (254)
T ss_dssp EEEECCTTTCST-----TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEE
T ss_pred cEEEECCceecC-----CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccch
Confidence 689999999993 446999999999999998 699999999999999987532 258999999999555444221
Q ss_pred ccCCCccccCCCccchhHHHHHHHHHHHHhc-----cCCCcEEEecc-------------ceEEEee-------------
Q 017025 202 KKGNHGVLCQPASEFLPMINEVYQTLLEKTK-----SIPGAKVENNK-------------FCLSVHF------------- 250 (379)
Q Consensus 202 ~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~-----~~~g~~iE~~~-------------~~l~~~~------------- 250 (379)
. .+.. ...+.++.+.+.+... ...+.++.... .......
T Consensus 76 ~--------~~i~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~ 145 (254)
T PF08282_consen 76 E--------KPID--SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKIL 145 (254)
T ss_dssp E--------ESB---HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEE
T ss_pred h--------hhee--ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeee
Confidence 1 1111 1334455555544210 00111111110 0000000
Q ss_pred ccCCcchHHHHHHHHHHHHhhCCCc-E-EEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHH
Q 017025 251 RCVDENSWGTLAEQVRVVLDKYPKL-T-LTQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAF 328 (379)
Q Consensus 251 r~vd~~~~~~l~e~v~~vl~~~p~l-~-v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf 328 (379)
-..+++....+.+.+. +.+++. . ...+..++||.|. ++|||.|+++|++.+|++.+ ++++|||+.||++||
T Consensus 146 ~~~~~~~~~~l~~~l~---~~~~~~~~~~~~~~~~lei~~~-~vsK~~ai~~l~~~~~i~~~---~~~~~GD~~ND~~Ml 218 (254)
T PF08282_consen 146 FFPDPEDLEQLREELK---KKFPNLIDVVRSSPYFLEITPK-GVSKGSAIKYLLEYLGISPE---DIIAFGDSENDIEML 218 (254)
T ss_dssp EESCHHHHHHHHHHHH---HHHTTTEEEEEEETTEEEEEET-TSSHHHHHHHHHHHHTTSGG---GEEEEESSGGGHHHH
T ss_pred ccccchhhhhhhhhhc---cccCcceeEEEecccceEEeeC-CCCHHHHHHHHhhhcccccc---eeEEeecccccHhHH
Confidence 0001111223333333 333332 3 3467899999999 99999999999999999875 899999999999999
Q ss_pred HHHHhcCCeEEEEecCCCC--CCcceEEeC--CHHHHHHHH
Q 017025 329 KVLRNRGQGFGILVSKTPK--ETHASYSLQ--EPSEVKDFL 365 (379)
Q Consensus 329 ~~~~~~~~G~gVaVgna~~--~t~A~y~l~--d~~eV~~~L 365 (379)
+.+ |+||+|+|+.+ +..|+|++. +.++|.++|
T Consensus 219 ~~~-----~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 219 ELA-----GYSVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp HHS-----SEEEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred hhc-----CeEEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 998 99999999985 489999985 336787765
No 21
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.95 E-value=1.9e-26 Score=219.48 Aligned_cols=223 Identities=22% Similarity=0.238 Sum_probs=146.4
Q ss_pred cEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc-c-cCceEEecCCceEecCC-C
Q 017025 122 KIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK-L-AGLYYAGSHGMDIEGPS-K 197 (379)
Q Consensus 122 ~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~-l-~~l~li~~nGa~I~~~~-~ 197 (379)
.+++|+|+||||++. ...++++++++|++++++ +.|+|||||+...+..++. + ...++|++||+.|+... +
T Consensus 3 ~kli~~DlDGTLl~~-----~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~ 77 (272)
T PRK10530 3 YRVIALDLDGTLLTP-----KKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAK 77 (272)
T ss_pred ccEEEEeCCCceECC-----CCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCC
Confidence 479999999999983 357999999999999999 6999999999998887763 2 23479999999999753 3
Q ss_pred ccccccCCCccccCCCccchhHHHHHHHHHHHHhc-----cCCCcEEEecc--c------eEEE------eeccCCc---
Q 017025 198 KRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTK-----SIPGAKVENNK--F------CLSV------HFRCVDE--- 255 (379)
Q Consensus 198 ~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~-----~~~g~~iE~~~--~------~l~~------~~r~vd~--- 255 (379)
...+.. +.. .+.+.++++.+.+.-- ...+.+..... + .... .+..+.+
T Consensus 78 ~~l~~~--------~l~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (272)
T PRK10530 78 KVLEAD--------PLP--VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQ 147 (272)
T ss_pred EEEEec--------CCC--HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHH
Confidence 321110 000 1233444444432100 00000000000 0 0000 0000000
Q ss_pred ---------------chHHHHHHHHHHHHhhCCCcEEE-eCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEc
Q 017025 256 ---------------NSWGTLAEQVRVVLDKYPKLTLT-QGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIG 319 (379)
Q Consensus 256 ---------------~~~~~l~e~v~~vl~~~p~l~v~-~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~G 319 (379)
.....+.+..+.+.+.+ ++.+. ++..++||.|. +++||.|++++++++|++.+ ++++||
T Consensus 148 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~ei~~~-~~~K~~~l~~l~~~~gi~~~---e~i~~G 222 (272)
T PRK10530 148 AARQVNAIWKFALTHEDLPQLQHFAKHVEHEL-GLECEWSWHDQVDIARK-GNSKGKRLTQWVEAQGWSMK---NVVAFG 222 (272)
T ss_pred HHhhcCCcEEEEEecCCHHHHHHHHHHHhhhc-CceEEEecCceEEEecC-CCChHHHHHHHHHHcCCCHH---HeEEeC
Confidence 00011112222233333 34443 44568999999 99999999999999999875 899999
Q ss_pred CCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEeC--CHHHHHHHHHHHH
Q 017025 320 DDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSLQ--EPSEVKDFLRRLV 369 (379)
Q Consensus 320 D~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l~--d~~eV~~~L~~Lv 369 (379)
|+.||++||+.+ |+||+|+|+.. +..|+|++. +.++|.++|++++
T Consensus 223 D~~NDi~m~~~a-----g~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 223 DNFNDISMLEAA-----GLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred CChhhHHHHHhc-----CceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 999999999998 89999999864 378999884 6678999999875
No 22
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.94 E-value=3.5e-26 Score=216.36 Aligned_cols=228 Identities=18% Similarity=0.192 Sum_probs=152.5
Q ss_pred cEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhc---cc-cCceEEecCCceEecCC
Q 017025 122 KIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFV---KL-AGLYYAGSHGMDIEGPS 196 (379)
Q Consensus 122 ~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~---~l-~~l~li~~nGa~I~~~~ 196 (379)
+.+|++||||||+++.+. ...++++++++++++.++ ..|++||||+...+..+. ++ .+.++|++||+.|+.++
T Consensus 1 ~~li~tDlDGTLl~~~~~--~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~ 78 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDG--DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGG 78 (249)
T ss_pred CeEEEEcCCCcCcCCCCC--ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCC
Confidence 468999999999986432 357889999999999999 599999999999988874 43 22368999999999754
Q ss_pred CccccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEeccceEEEeeccCCcchHHHHHHHHHHHHhhCC-Cc
Q 017025 197 KKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSVHFRCVDENSWGTLAEQVRVVLDKYP-KL 275 (379)
Q Consensus 197 ~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~~~~l~~~~r~vd~~~~~~l~e~v~~vl~~~p-~l 275 (379)
... ....|... ....|. .+.+...+..+....+....+.+.+.+.+.+. .+....+.+.+.+.+..+. .+
T Consensus 79 ~~~---~~~~~~~~-~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~---~~~~~~~~~~l~~~l~~~~~~~ 149 (249)
T TIGR01485 79 AEV---PDQHWAEY-LSEKWQ--RDIVVAITDKFEELKPQPDLEQRPHKVSFFLD---PEAAPEVIKQLTEMLKETGLDV 149 (249)
T ss_pred CCc---CCHHHHHH-HhcccC--HHHHHHHHhcCcccccCCccccCCeeEEEEec---hhhhhHHHHHHHHHHHhcCCCE
Confidence 211 11111111 111222 12233332222111222223334445554433 2222334455566665542 23
Q ss_pred EE-EeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCCC--Cc--
Q 017025 276 TL-TQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPKE--TH-- 350 (379)
Q Consensus 276 ~v-~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~~--t~-- 350 (379)
.+ .++..++||.|+ +++||.|+++|++.+|++.+ ++++|||+.||++||+.+ .+++|+|+|+..+ ..
T Consensus 150 ~~~~~~~~~ldi~~~-~~~K~~al~~l~~~~~i~~~---~~i~~GD~~ND~~ml~~~----~~~~va~~na~~~~k~~~~ 221 (249)
T TIGR01485 150 KLIYSSGKDLDILPQ-GSGKGQALQYLLQKLAMEPS---QTLVCGDSGNDIELFEIG----SVRGVIVSNAQEELLQWYD 221 (249)
T ss_pred EEEEECCceEEEEeC-CCChHHHHHHHHHHcCCCcc---CEEEEECChhHHHHHHcc----CCcEEEECCCHHHHHHHHH
Confidence 43 467789999999 99999999999999999875 899999999999999984 1799999999743 22
Q ss_pred -----ceEEeC--CHHHHHHHHHHH
Q 017025 351 -----ASYSLQ--EPSEVKDFLRRL 368 (379)
Q Consensus 351 -----A~y~l~--d~~eV~~~L~~L 368 (379)
..|.++ .++++.+.|+++
T Consensus 222 ~~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 222 ENAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred hcccCcEEEecCCCcHHHHHHHHHc
Confidence 227665 578899988875
No 23
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.94 E-value=2.4e-26 Score=212.86 Aligned_cols=211 Identities=20% Similarity=0.268 Sum_probs=138.5
Q ss_pred EEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc-c-cCceEEecCCceEecCCCc-cc
Q 017025 125 MFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK-L-AGLYYAGSHGMDIEGPSKK-RR 200 (379)
Q Consensus 125 iflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~-l-~~l~li~~nGa~I~~~~~~-~~ 200 (379)
|++|+||||++. ...++++++++|++|++. +.|+|||||++..+..++. + ...++|++||+.|+...+. ..
T Consensus 1 i~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~ 75 (225)
T TIGR01482 1 IASDIDGTLTDP-----NRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDI 75 (225)
T ss_pred CeEeccCccCCC-----CcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceE
Confidence 589999999983 347999999999999999 6999999999998887653 2 2457999999999876432 11
Q ss_pred cccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEeccceEEEeeccCCcchHHHHHHHHHHHHhhCC-CcEEEe
Q 017025 201 YKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSVHFRCVDENSWGTLAEQVRVVLDKYP-KLTLTQ 279 (379)
Q Consensus 201 ~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~~~~l~~~~r~vd~~~~~~l~e~v~~vl~~~p-~l~v~~ 279 (379)
+ .. .....|.. ..............-.. .... .+.......+. +.++.+++.+. .+.+.+
T Consensus 76 ~------~~-~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 136 (225)
T TIGR01482 76 F------LA-YLEEEWFL---DIVIAKTFPFSRLKVQY-PRRA-SLVKMRYGIDV-------DTVREIIKELGLNLVAVD 136 (225)
T ss_pred E------ec-ccCHHHHH---HHHHhcccchhhhcccc-cccc-ceEEEeecCCH-------HHHHHHHHhcCceEEEec
Confidence 1 00 01111111 11000000000000000 0000 00001111111 12223333332 233334
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEeC-
Q 017025 280 GRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSLQ- 356 (379)
Q Consensus 280 g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l~- 356 (379)
+..++||.|+ +++||.|+++|++++|++.+ ++++|||+.||++||+.+ |+||+|+|+.. +..|+|++.
T Consensus 137 ~~~~~ei~~~-~~~K~~~i~~l~~~~~i~~~---~~i~~GD~~NDi~m~~~a-----g~~vam~Na~~~~k~~A~~vt~~ 207 (225)
T TIGR01482 137 SGFDIHILPQ-GVNKGVAVKKLKEKLGIKPG---ETLVCGDSENDIDLFEVP-----GFGVAVANAQPELKEWADYVTES 207 (225)
T ss_pred CCcEEEEeeC-CCCHHHHHHHHHHHhCCCHH---HEEEECCCHhhHHHHHhc-----CceEEcCChhHHHHHhcCeecCC
Confidence 5679999999 99999999999999999875 899999999999999998 99999999975 478999884
Q ss_pred -CHHH----HHHHHHHH
Q 017025 357 -EPSE----VKDFLRRL 368 (379)
Q Consensus 357 -d~~e----V~~~L~~L 368 (379)
+.++ |.++|+++
T Consensus 208 ~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 208 PYGEGGAEAIGEILQAI 224 (225)
T ss_pred CCCCcHHHHHHHHHHhh
Confidence 5567 88888875
No 24
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.94 E-value=1.7e-25 Score=212.50 Aligned_cols=219 Identities=18% Similarity=0.190 Sum_probs=143.5
Q ss_pred EEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhccc-c-CceEEecCCceEecCCCccc
Q 017025 124 VMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVKL-A-GLYYAGSHGMDIEGPSKKRR 200 (379)
Q Consensus 124 liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~l-~-~l~li~~nGa~I~~~~~~~~ 200 (379)
++|+|+||||+.. .....+.++++|++|+++ ++++|||||+...+..++.. . ..++|++||+.|+.+.+...
T Consensus 1 li~~DlDGTll~~-----~~~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~ 75 (256)
T TIGR01486 1 WIFTDLDGTLLDP-----HGYDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFT 75 (256)
T ss_pred CEEEcCCCCCcCC-----CCcCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCccc
Confidence 5899999999983 222444689999999999 69999999999998887642 1 24899999999998654311
Q ss_pred cccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEe----------------------ccceEEEeeccCCcchH
Q 017025 201 YKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVEN----------------------NKFCLSVHFRCVDENSW 258 (379)
Q Consensus 201 ~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~----------------------~~~~l~~~~r~vd~~~~ 258 (379)
.. ..|+..... . .+.+.++++.+.+... ..-..... ..+...+ +. ++
T Consensus 76 ~~--~~~~~~~~i-~-~~~~~~il~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~--- 144 (256)
T TIGR01486 76 EP--EYPVIALGI-P-YEKIRARLEELSEELG-FKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETI-LW--SE--- 144 (256)
T ss_pred CC--CeEEEEcCC-C-HHHHHHHHHHHHHHhC-CCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCce-ec--Ch---
Confidence 00 001111111 1 1234444443322110 00000000 0000000 00 11
Q ss_pred HHHHHHHHHHHhhCCCcEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCC--CCCCccEEEEcCCcCCHHHHHHHHhcCC
Q 017025 259 GTLAEQVRVVLDKYPKLTLTQGRMVLEIRPTIKWDKGKALEFLLEALGYA--NSKDVVPVYIGDDRTDEDAFKVLRNRGQ 336 (379)
Q Consensus 259 ~~l~e~v~~vl~~~p~l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~--~~~~~~vi~~GD~~NDe~mf~~~~~~~~ 336 (379)
+..+.+...++.. ++.++.+..++||.|+ +++||.|+++|++++|++ .+ ++++|||+.||++||+.+
T Consensus 145 -~~~~~~~~~~~~~-~~~~~~s~~~~ei~~~-~~~Kg~ai~~l~~~~~i~~~~~---~~~a~GD~~ND~~Ml~~a----- 213 (256)
T TIGR01486 145 -ERRERFTEALVEL-GLEVTHGNRFYHVLGA-GSDKGKAANALKQFYNQPGGAI---KVVGLGDSPNDLPLLEVV----- 213 (256)
T ss_pred -HHHHHHHHHHHHc-CCEEEeCCceEEEecC-CCCHHHHHHHHHHHHhhcCCCc---eEEEEcCCHhhHHHHHHC-----
Confidence 2233344444443 4666666679999999 999999999999999998 54 899999999999999998
Q ss_pred eEEEEecCCC-----CCCc--c-eEEe--CCHHHHHHHHHHHH
Q 017025 337 GFGILVSKTP-----KETH--A-SYSL--QEPSEVKDFLRRLV 369 (379)
Q Consensus 337 G~gVaVgna~-----~~t~--A-~y~l--~d~~eV~~~L~~Lv 369 (379)
|+||+|+|++ .+.. | .|++ ++.++|.+.|++++
T Consensus 214 g~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~~ 256 (256)
T TIGR01486 214 DLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHLL 256 (256)
T ss_pred CEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHhC
Confidence 9999999996 2344 4 4887 46789999999874
No 25
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.94 E-value=7.3e-26 Score=209.32 Aligned_cols=207 Identities=22% Similarity=0.286 Sum_probs=138.9
Q ss_pred EEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhccc--cCceEEecCCceEecCCCcc
Q 017025 123 IVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVKL--AGLYYAGSHGMDIEGPSKKR 199 (379)
Q Consensus 123 ~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~l--~~l~li~~nGa~I~~~~~~~ 199 (379)
+++|+|+||||++. ...++++++++|++|++. ..|+|+|||+...+..++.. ...++|++||+.|+.+....
T Consensus 2 k~v~~DlDGTLl~~-----~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 2 KLVAIDIDGTLTEP-----NRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred cEEEEecCCCcCCC-----CcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 58999999999982 457999999999999999 69999999999998887542 23379999999999864321
Q ss_pred ccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEeccceEEEeeccCCcchHHHHHHHHHHHHhhCCCcEEEe
Q 017025 200 RYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSVHFRCVDENSWGTLAEQVRVVLDKYPKLTLTQ 279 (379)
Q Consensus 200 ~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~~~~l~~~~r~vd~~~~~~l~e~v~~vl~~~p~l~v~~ 279 (379)
.. ......+.. ...... .+....-.. ........+ .+..... +.++..++. .++.+..
T Consensus 77 ~~--------~~~~~~~~~--~~~~~~--~~~~~~~~~--~~~~~~~~~---~~~~~~~----~~~~~~l~~-~~~~~~~ 134 (215)
T TIGR01487 77 FL--------ANMEEEWFL--DEEKKK--RFPRDRLSN--EYPRASLVI---MREGKDV----DEVREIIKE-RGLNLVD 134 (215)
T ss_pred EE--------ecccchhhH--HHhhhh--hhhhhhccc--ccceeEEEE---ecCCccH----HHHHHHHHh-CCeEEEe
Confidence 00 011111110 000000 000000000 000000101 1112122 223334433 2566655
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEeC-
Q 017025 280 GRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSLQ- 356 (379)
Q Consensus 280 g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l~- 356 (379)
+...+||.|. +++||+|++++++++|++.+ ++++|||+.||++||+.+ |+||+|+|+.. +..|+|++.
T Consensus 135 ~~~~~ei~~~-~~~K~~~i~~l~~~~~i~~~---~~i~iGDs~ND~~ml~~a-----g~~vam~na~~~~k~~A~~v~~~ 205 (215)
T TIGR01487 135 SGFAIHIMKK-GVDKGVGVEKLKELLGIKPE---EVAAIGDSENDIDLFRVV-----GFKVAVANADDQLKEIADYVTSN 205 (215)
T ss_pred cCceEEEecC-CCChHHHHHHHHHHhCCCHH---HEEEECCCHHHHHHHHhC-----CCeEEcCCccHHHHHhCCEEcCC
Confidence 5678999999 99999999999999999864 899999999999999998 89999999975 478999985
Q ss_pred -CHHHHHHHH
Q 017025 357 -EPSEVKDFL 365 (379)
Q Consensus 357 -d~~eV~~~L 365 (379)
+.++|.++|
T Consensus 206 ~~~~Gv~~~l 215 (215)
T TIGR01487 206 PYGEGVVEVL 215 (215)
T ss_pred CCCchhhhhC
Confidence 556777654
No 26
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.94 E-value=6.6e-26 Score=212.62 Aligned_cols=217 Identities=18% Similarity=0.194 Sum_probs=144.8
Q ss_pred EEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc---cc-CceEEecCCceEecCCCc
Q 017025 124 VMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK---LA-GLYYAGSHGMDIEGPSKK 198 (379)
Q Consensus 124 liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~---l~-~l~li~~nGa~I~~~~~~ 198 (379)
+|++||||||++. ...+++.. ++++ ++++ ..|+++|||++..+..+++ +. ..++|++||+.|+.+...
T Consensus 1 li~~DlDgTLl~~-----~~~~~~~~-~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~ 73 (236)
T TIGR02471 1 LIITDLDNTLLGD-----DEGLASFV-ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPEL 73 (236)
T ss_pred CeEEeccccccCC-----HHHHHHHH-HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCC
Confidence 5899999999982 34577655 6776 5666 6899999999999999864 32 236999999999765321
Q ss_pred cccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEecc--ceEEEeeccCCcchHHHHHHHHHHHHhhC-CCc
Q 017025 199 RRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNK--FCLSVHFRCVDENSWGTLAEQVRVVLDKY-PKL 275 (379)
Q Consensus 199 ~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~~--~~l~~~~r~vd~~~~~~l~e~v~~vl~~~-p~l 275 (379)
. ....|... ....|. ..++. +.....++..++... ....++++..++.. . ..+++...++.+ ..+
T Consensus 74 ~---~~~~~~~~-~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~-~~~~~~~~l~~~~~~~ 141 (236)
T TIGR02471 74 Q---PDRFWQKH-IDHDWR--RQAVV----EALADIPGLTLQDDQEQGPFKISYLLDPEGE-P-ILPQIRQRLRQQSQAA 141 (236)
T ss_pred C---CChhHHHH-HhcCCC--HHHHH----HHHhcCCCcEeCChhcCCCeeEEEEECcccc-h-HHHHHHHHHHhccCCE
Confidence 0 00011100 011111 11222 223345666655543 23556666433211 1 122333344333 223
Q ss_pred EE-EeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCCC--Ccce
Q 017025 276 TL-TQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPKE--THAS 352 (379)
Q Consensus 276 ~v-~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~~--t~A~ 352 (379)
.+ .++..++||.|+ ++|||.|+++|++++|++.+ ++++|||+.||++||+.+ |+||+|+|+..+ ..|+
T Consensus 142 ~~~~~~~~~~ei~~~-~~~K~~al~~l~~~~g~~~~---~~i~~GD~~nD~~ml~~~-----~~~iav~na~~~~k~~a~ 212 (236)
T TIGR02471 142 KVILSCGWFLDVLPL-RASKGLALRYLSYRWGLPLE---QILVAGDSGNDEEMLRGL-----TLGVVVGNHDPELEGLRH 212 (236)
T ss_pred EEEEECCceEEEeeC-CCChHHHHHHHHHHhCCCHH---HEEEEcCCccHHHHHcCC-----CcEEEEcCCcHHHHHhhc
Confidence 33 355678999999 99999999999999999874 899999999999999987 899999999753 5677
Q ss_pred ----EEeC--CHHHHHHHHHHH
Q 017025 353 ----YSLQ--EPSEVKDFLRRL 368 (379)
Q Consensus 353 ----y~l~--d~~eV~~~L~~L 368 (379)
|++. +.++|.++|+++
T Consensus 213 ~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 213 QQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred CCcEEEcCCCChhHHHHHHHhh
Confidence 7775 467899999875
No 27
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.94 E-value=1e-25 Score=213.56 Aligned_cols=218 Identities=21% Similarity=0.282 Sum_probs=142.9
Q ss_pred EEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc-c-cCceEEecCCceEecCCCccc
Q 017025 124 VMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK-L-AGLYYAGSHGMDIEGPSKKRR 200 (379)
Q Consensus 124 liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~-l-~~l~li~~nGa~I~~~~~~~~ 200 (379)
++|+|+||||++. ...++++++++|++|+++ +.++|||||+...+..++. + ...++|++||+.|+...++..
T Consensus 1 li~~DlDGTLl~~-----~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i 75 (256)
T TIGR00099 1 LIFIDLDGTLLND-----DHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEIL 75 (256)
T ss_pred CEEEeCCCCCCCC-----CCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEE
Confidence 5899999999983 457999999999999999 6999999999999888764 2 234799999999998644321
Q ss_pred cccCCCccccCCCccchhHHHHHHHHHHHHhc-----cCCCcEEEeccce-EE----Eeecc---CC------cch----
Q 017025 201 YKKGNHGVLCQPASEFLPMINEVYQTLLEKTK-----SIPGAKVENNKFC-LS----VHFRC---VD------ENS---- 257 (379)
Q Consensus 201 ~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~-----~~~g~~iE~~~~~-l~----~~~r~---vd------~~~---- 257 (379)
+. .+.. .+.+.++.+.+.+... ...+.++...... +. ..+.. +. ...
T Consensus 76 ~~--------~~i~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (256)
T TIGR00099 76 YK--------KPLD--LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKIL 145 (256)
T ss_pred ee--------cCCC--HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEE
Confidence 11 1111 1334455555443210 0011111110000 00 00000 00 000
Q ss_pred ----HHHHHHHHHHHHh--hC-CCcEE-EeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHH
Q 017025 258 ----WGTLAEQVRVVLD--KY-PKLTL-TQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFK 329 (379)
Q Consensus 258 ----~~~l~e~v~~vl~--~~-p~l~v-~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~ 329 (379)
-....+.+...++ .+ +.+.+ .++..++||.|+ ++|||.|++++++.+|++.+ ++++|||+.||++||+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~-~~~K~~~i~~~~~~~~~~~~---~~~~~GD~~nD~~m~~ 221 (256)
T TIGR00099 146 LLFLDPEDLDLLIEALNKLELEENVSVVSSGPYSIEITAK-GVSKGSALQSLAEALGISLE---DVIAFGDGMNDIEMLE 221 (256)
T ss_pred EEECCHHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCC-CCChHHHHHHHHHHcCCCHH---HEEEeCCcHHhHHHHH
Confidence 0111222333332 12 24655 456789999999 99999999999999999874 8999999999999999
Q ss_pred HHHhcCCeEEEEecCCCC--CCcceEEeC--CHHHHHHHH
Q 017025 330 VLRNRGQGFGILVSKTPK--ETHASYSLQ--EPSEVKDFL 365 (379)
Q Consensus 330 ~~~~~~~G~gVaVgna~~--~t~A~y~l~--d~~eV~~~L 365 (379)
.+ |++++|+|++. +..|+|++. +.++|.++|
T Consensus 222 ~~-----~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 222 AA-----GYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred hC-----CceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 98 89999999874 478899885 556787654
No 28
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.93 E-value=5.2e-24 Score=204.29 Aligned_cols=228 Identities=19% Similarity=0.258 Sum_probs=147.0
Q ss_pred cEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcccc--CceEEecCCceEecCCCc
Q 017025 122 KIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVKLA--GLYYAGSHGMDIEGPSKK 198 (379)
Q Consensus 122 ~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~l~--~l~li~~nGa~I~~~~~~ 198 (379)
.+++|+|+||||++. ...++++++++|++|++. +.++|||||+...+..++... ..+++++||+.|+.+.+.
T Consensus 4 ~kli~~DlDGTLl~~-----~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~ 78 (273)
T PRK00192 4 KLLVFTDLDGTLLDH-----HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNY 78 (273)
T ss_pred ceEEEEcCcccCcCC-----CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccc
Confidence 478999999999983 346788999999999999 699999999999888776421 237999999999875432
Q ss_pred ccc------ccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEe---ccc----eEEE---------eec--cC-
Q 017025 199 RRY------KKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVEN---NKF----CLSV---------HFR--CV- 253 (379)
Q Consensus 199 ~~~------~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~---~~~----~l~~---------~~r--~v- 253 (379)
..+ ....+++...+.. .+.+.+++..+.+... ..-..... ... .+.. .+. .+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (273)
T PRK00192 79 FPFQPDGERLKGDYWVIELGPP--YEELREILDEISDELG-YPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLW 155 (273)
T ss_pred cccCCccccccCCceEEEcCCC--HHHHHHHHHHHHHHhC-CCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceee
Confidence 100 0000111111111 1233444443322110 00000000 000 0000 000 00
Q ss_pred CcchHHHHHHHHHHHHhhCCCcEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCC-CCCccEEEEcCCcCCHHHHHHHH
Q 017025 254 DENSWGTLAEQVRVVLDKYPKLTLTQGRMVLEIRPTIKWDKGKALEFLLEALGYAN-SKDVVPVYIGDDRTDEDAFKVLR 332 (379)
Q Consensus 254 d~~~~~~l~e~v~~vl~~~p~l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~-~~~~~vi~~GD~~NDe~mf~~~~ 332 (379)
... .+..+.+...++.+ ++.+..+..++||.|. + +||+|+++|++.+|++. + ++++|||+.||++||+.+
T Consensus 156 ~~~--~~~~~~~~~~l~~~-~~~~~~~~~~~ei~~~-~-~Kg~al~~l~~~~~i~~~~---~v~~~GDs~NDi~m~~~a- 226 (273)
T PRK00192 156 NGS--EAAKERFEEALKRL-GLKVTRGGRFLHLLGG-G-DKGKAVRWLKELYRRQDGV---ETIALGDSPNDLPMLEAA- 226 (273)
T ss_pred cCc--hHHHHHHHHHHHHc-CCEEEECCeEEEEeCC-C-CHHHHHHHHHHHHhccCCc---eEEEEcCChhhHHHHHhC-
Confidence 000 12223344444443 5676667789999999 9 99999999999999987 6 899999999999999998
Q ss_pred hcCCeEEEEecCCCCC------Ccc-eEEe--C--CHHHHHHHHHHHHH
Q 017025 333 NRGQGFGILVSKTPKE------THA-SYSL--Q--EPSEVKDFLRRLVQ 370 (379)
Q Consensus 333 ~~~~G~gVaVgna~~~------t~A-~y~l--~--d~~eV~~~L~~Lv~ 370 (379)
|++|+|+|++.+ ..| .+++ + +.++|.+.|++++.
T Consensus 227 ----g~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 227 ----DIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred ----CeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHHh
Confidence 999999999754 333 4655 3 57899999999864
No 29
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.91 E-value=7.9e-24 Score=196.20 Aligned_cols=193 Identities=18% Similarity=0.231 Sum_probs=125.3
Q ss_pred EEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc---ccCceEEecCCceEecCCCcc
Q 017025 124 VMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK---LAGLYYAGSHGMDIEGPSKKR 199 (379)
Q Consensus 124 liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~---l~~l~li~~nGa~I~~~~~~~ 199 (379)
+||+|+||||++. +...++.++++|++|++. +++++||||+...+..++. +...++||+||+.|+.+....
T Consensus 1 ~i~~DlDGTLL~~-----~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~ 75 (221)
T TIGR02463 1 WVFSDLDGTLLDS-----HSYDWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWR 75 (221)
T ss_pred CEEEeCCCCCcCC-----CCCCcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCcccc
Confidence 5899999999983 234566699999999998 6999999999999888764 332589999999999763321
Q ss_pred ccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEec-----------------------cceEEEeeccCCcc
Q 017025 200 RYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENN-----------------------KFCLSVHFRCVDEN 256 (379)
Q Consensus 200 ~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~-----------------------~~~l~~~~r~vd~~ 256 (379)
.... -+...... .+ +.+.++++.+.+... .. .....+ .....+... .+
T Consensus 76 ~~~~--~~~~~~~~-~~-~~~~~i~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-- 146 (221)
T TIGR02463 76 EEPG--YPRIILGI-SY-GIIRLVLETLSEELH-FK-FTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWR-DS-- 146 (221)
T ss_pred cCCC--ceEEecCC-CH-HHHHHHHHHHHHHhC-CC-ceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEec-Cc--
Confidence 0000 00000111 11 234444443322210 00 000000 000000010 01
Q ss_pred hHHHHHHHHHHHHhhCCCcEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCC
Q 017025 257 SWGTLAEQVRVVLDKYPKLTLTQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQ 336 (379)
Q Consensus 257 ~~~~l~e~v~~vl~~~p~l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~ 336 (379)
.+..+.+++.++.. ++.+.++..++||.|. +++||.|++++++++|++.+ ++++|||+.||++||+.+
T Consensus 147 --~~~~~~~~~~l~~~-~~~~~~~~~~~ei~~~-~~~Kg~al~~l~~~lgi~~~---~vi~~GD~~NDi~ml~~a----- 214 (221)
T TIGR02463 147 --DSRMPRFTALLADL-GLAIVQGNRFSHVLGA-SSSKGKAANWLKATYNQPDV---KTLGLGDGPNDLPLLEVA----- 214 (221)
T ss_pred --hhHHHHHHHHHHHc-CCeEEecCCeeEEecC-CCCHHHHHHHHHHHhCCCCC---cEEEECCCHHHHHHHHhC-----
Confidence 12233344455543 5777667789999999 99999999999999999875 899999999999999998
Q ss_pred eEEEEe
Q 017025 337 GFGILV 342 (379)
Q Consensus 337 G~gVaV 342 (379)
|+||+|
T Consensus 215 g~~va~ 220 (221)
T TIGR02463 215 DYAVVI 220 (221)
T ss_pred CceEEe
Confidence 899987
No 30
>PLN02382 probable sucrose-phosphatase
Probab=99.91 E-value=8.8e-24 Score=213.99 Aligned_cols=233 Identities=17% Similarity=0.145 Sum_probs=148.4
Q ss_pred cCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHH-HHHHhc-CCEEEEcCCChhhHHhhc---cc-cCceEEecCCceE
Q 017025 119 KGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAV-RDVARY-FPTAIVTGRCRDKVFSFV---KL-AGLYYAGSHGMDI 192 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL-~~L~~~-~~vaIaTGR~~~~l~~~~---~l-~~l~li~~nGa~I 192 (379)
...+.+|++|+||||++..+ ...++.....++ +++.++ ..|+++|||++..+..+. ++ .+.++|++||+.|
T Consensus 6 ~~~~~lI~sDLDGTLL~~~~---~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I 82 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHHD---PENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEI 82 (413)
T ss_pred CCCCEEEEEcCCCcCcCCCC---ccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEE
Confidence 34678999999999998532 235776566666 888877 589999999987776654 33 2336888899999
Q ss_pred ecCCCccccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEeccceEEEeeccCCcchHHHHHHHHHHHHhhC
Q 017025 193 EGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSVHFRCVDENSWGTLAEQVRVVLDKY 272 (379)
Q Consensus 193 ~~~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~~~~l~~~~r~vd~~~~~~l~e~v~~vl~~~ 272 (379)
+...... .+..|..+. ...|.. ..+.+.+..+.........+.+.+.+.+.+.. +....+.+.+.+.+...
T Consensus 83 ~~~~~~~---~d~~w~~~l-~~~w~~--~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~---~~~~~~~~~l~~~~~~~ 153 (413)
T PLN02382 83 AYGESMV---PDHGWVEYL-NKKWDR--EIVVEETSKFPELKLQPETEQRPHKVSFYVDK---KKAQEVIKELSERLEKR 153 (413)
T ss_pred EeCCCCc---cChhHHHHH-hccCCh--hhHHHHHhcCCCcccCCcccCCCeEEEEEech---HHhHHHHHHHHHHHHhc
Confidence 8643211 111121111 112321 11222222211111112223333455554432 22233444455444432
Q ss_pred -CCcEE-EeCCeEEEEEcCCCCCHHHHHHHHHHHh---CCCCCCCccEEEEcCCcCCHHHHHHHHhcCCe-EEEEecCCC
Q 017025 273 -PKLTL-TQGRMVLEIRPTIKWDKGKALEFLLEAL---GYANSKDVVPVYIGDDRTDEDAFKVLRNRGQG-FGILVSKTP 346 (379)
Q Consensus 273 -p~l~v-~~g~~~lEI~P~~g~sKG~Al~~Lle~l---g~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G-~gVaVgna~ 346 (379)
..+.+ .++..++||.|+ ++|||.||++|++.+ |++.+ ++++|||+.||++||+.+ | +||+|+|+.
T Consensus 154 g~~~~i~~s~~~~ldI~p~-g~sKg~Al~~L~~~~~~~gi~~~---~~iafGDs~NDleMl~~a-----g~~gvam~NA~ 224 (413)
T PLN02382 154 GLDVKIIYSGGIDLDVLPQ-GAGKGQALAYLLKKLKAEGKAPV---NTLVCGDSGNDAELFSVP-----DVYGVMVSNAQ 224 (413)
T ss_pred CCcEEEEEECCcEEEEEeC-CCCHHHHHHHHHHHhhhcCCChh---cEEEEeCCHHHHHHHhcC-----CCCEEEEcCCc
Confidence 13443 467789999999 999999999999999 88764 899999999999999997 8 899999997
Q ss_pred CC--C--------cceEEe---CCHHHHHHHHHHHHHhh
Q 017025 347 KE--T--------HASYSL---QEPSEVKDFLRRLVQWK 372 (379)
Q Consensus 347 ~~--t--------~A~y~l---~d~~eV~~~L~~Lv~~~ 372 (379)
.+ . .+++++ +++++|.+.|+++.-..
T Consensus 225 ~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~l~~ 263 (413)
T PLN02382 225 EELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFNLGP 263 (413)
T ss_pred HHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhCCCC
Confidence 43 2 234443 36789999999886443
No 31
>PTZ00174 phosphomannomutase; Provisional
Probab=99.90 E-value=8.6e-23 Score=193.34 Aligned_cols=202 Identities=17% Similarity=0.228 Sum_probs=123.1
Q ss_pred CCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcccc---C-ceEEecCCceEec
Q 017025 120 GKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVKLA---G-LYYAGSHGMDIEG 194 (379)
Q Consensus 120 ~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~l~---~-l~li~~nGa~I~~ 194 (379)
.+.++|++|+||||++ +...++++++++|++++++ +.|+|||||++..+..+++.. . .|+|++||+.|+.
T Consensus 3 ~~~klia~DlDGTLL~-----~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~ 77 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK-----PRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYK 77 (247)
T ss_pred CCCeEEEEECcCCCcC-----CCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEE
Confidence 3568999999999998 3457999999999999999 699999999999998887632 2 3689999999996
Q ss_pred CCCccccccCCCccccCCCccchhHHHHHHHHHHHHh-----ccCCCcEEEeccceEEEeec-cCCc----ch-----H-
Q 017025 195 PSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKT-----KSIPGAKVENNKFCLSVHFR-CVDE----NS-----W- 258 (379)
Q Consensus 195 ~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~-----~~~~g~~iE~~~~~l~~~~r-~vd~----~~-----~- 258 (379)
. +...+.. .+..... .+.+.++++.+.+.. ....+.+.+.......+.+. .... +. .
T Consensus 78 ~-~~~i~~~----~i~~~l~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (247)
T PTZ00174 78 D-GELFHSQ----SILKFLG--EEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKE 150 (247)
T ss_pred C-CeEEEEE----cchhcCC--HHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCc
Confidence 3 3321111 0000000 123445555443321 11122333322111111110 0000 00 0
Q ss_pred HHHHHHHH-HHHhhCCCcEE--Ee-CCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcC----CcCCHHHHHH
Q 017025 259 GTLAEQVR-VVLDKYPKLTL--TQ-GRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGD----DRTDEDAFKV 330 (379)
Q Consensus 259 ~~l~e~v~-~vl~~~p~l~v--~~-g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD----~~NDe~mf~~ 330 (379)
....+.+. .+.+.++++.+ .. +..++||.|+ |+|||.||++|++.+ +++++||| +.||++||+.
T Consensus 151 ~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~-gvsKg~al~~L~~~~-------~eviafGD~~~~~~NDieMl~~ 222 (247)
T PTZ00174 151 HHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPK-GWDKTYCLRHLENDF-------KEIHFFGDKTFEGGNDYEIYND 222 (247)
T ss_pred chHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeC-CCcHHHHHHHHHhhh-------hhEEEEcccCCCCCCcHhhhhc
Confidence 01112222 22234444433 33 3579999999 999999999999992 27999999 8999999997
Q ss_pred HHhcCCeEEEEecCC
Q 017025 331 LRNRGQGFGILVSKT 345 (379)
Q Consensus 331 ~~~~~~G~gVaVgna 345 (379)
++. .|++|+ |+
T Consensus 223 ~~~--~g~~v~--n~ 233 (247)
T PTZ00174 223 PRT--IGHSVK--NP 233 (247)
T ss_pred CCC--ceEEeC--CH
Confidence 532 255544 54
No 32
>PLN02423 phosphomannomutase
Probab=99.90 E-value=4.4e-22 Score=188.51 Aligned_cols=211 Identities=22% Similarity=0.312 Sum_probs=136.1
Q ss_pred cCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhcccc---C-ceEEecCCceEec
Q 017025 119 KGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVKLA---G-LYYAGSHGMDIEG 194 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~~vaIaTGR~~~~l~~~~~l~---~-l~li~~nGa~I~~ 194 (379)
...++++|+|+||||++. +..++++++++|++|++++.|++||||+...+...++.. . .+++++||+.++.
T Consensus 4 ~~~~~i~~~D~DGTLl~~-----~~~i~~~~~~ai~~l~~~i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~ 78 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAP-----RKEATPEMLEFMKELRKVVTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHK 78 (245)
T ss_pred CccceEEEEeccCCCcCC-----CCcCCHHHHHHHHHHHhCCEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEe
Confidence 344567779999999983 457999999999999988899999999999887766542 1 4789999999985
Q ss_pred CCCccccccCCCccccCCCccch--hHHHHHHHHHHHHhc-----cCCCcEEEeccceEEEe--eccCCc------chH-
Q 017025 195 PSKKRRYKKGNHGVLCQPASEFL--PMINEVYQTLLEKTK-----SIPGAKVENNKFCLSVH--FRCVDE------NSW- 258 (379)
Q Consensus 195 ~~~~~~~~~~~e~~~~~~~~~~~--~~i~ev~~~l~~~~~-----~~~g~~iE~~~~~l~~~--~r~vd~------~~~- 258 (379)
. ++..+. .+...++ +.+.++++.+..... ...+.+++.......+. +..+.. ..+
T Consensus 79 ~-g~~i~~--------~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~ 149 (245)
T PLN02423 79 D-GKLIGT--------QSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYD 149 (245)
T ss_pred C-CEEEEE--------ecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhC
Confidence 3 332111 0111111 344555555443211 12344555332222111 111110 011
Q ss_pred --H-HHHHHHHHHHhhCCCcEE--E-eCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcC----CcCCHHHH
Q 017025 259 --G-TLAEQVRVVLDKYPKLTL--T-QGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGD----DRTDEDAF 328 (379)
Q Consensus 259 --~-~l~e~v~~vl~~~p~l~v--~-~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD----~~NDe~mf 328 (379)
. ...+..+.+.+.++++.+ . .|..++||.|+ |+|||.||++|+ +. +++++||| +.||++||
T Consensus 150 ~i~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~-gvnKg~al~~L~-----~~---~e~~aFGD~~~~~~ND~eMl 220 (245)
T PLN02423 150 KVHNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQ-GWDKTYCLQFLE-----DF---DEIHFFGDKTYEGGNDHEIF 220 (245)
T ss_pred ccchHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeC-CCCHHHHHHHhc-----Cc---CeEEEEeccCCCCCCcHHHH
Confidence 1 112222334456666554 2 34589999999 999999999999 33 38999999 79999999
Q ss_pred HHHHhcCCeEEEEecCCCCCCcceEEeCCHHHHHHHHHHHH
Q 017025 329 KVLRNRGQGFGILVSKTPKETHASYSLQEPSEVKDFLRRLV 369 (379)
Q Consensus 329 ~~~~~~~~G~gVaVgna~~~t~A~y~l~d~~eV~~~L~~Lv 369 (379)
+.- +-.++. +.+|+++.+.|.+|+
T Consensus 221 ~~~----~~~~~~-------------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 221 ESE----RTIGHT-------------VTSPDDTREQCTALF 244 (245)
T ss_pred hCC----CcceEE-------------eCCHHHHHHHHHHhc
Confidence 963 123554 578999999998875
No 33
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.1e-21 Score=208.44 Aligned_cols=226 Identities=29% Similarity=0.398 Sum_probs=180.2
Q ss_pred HHHHHhc-cCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc--CCEEEEcCCChhhHHhh-ccccCceEEec
Q 017025 112 EEIVNAS-KGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY--FPTAIVTGRCRDKVFSF-VKLAGLYYAGS 187 (379)
Q Consensus 112 ~~~~~~~-~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~--~~vaIaTGR~~~~l~~~-~~l~~l~li~~ 187 (379)
+.++..+ ++++++|++|||||+.+.+ +..+...|+.|+.. ..+.|+|||++..+... .+.++++++++
T Consensus 492 ~~~i~~y~~s~~rli~ldyd~t~~~~~--------~~~~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aE 563 (732)
T KOG1050|consen 492 EHIVSDYKKSKKRLILLDYDLTLIPPR--------SIKAISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAE 563 (732)
T ss_pred hHhhhhhhhccceEEEecccccccCCC--------CchHHHHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecc
Confidence 3555666 8899999999999988832 22288999999998 47999999999999775 46799999999
Q ss_pred CCceEecCCCccccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEeccceEEEeeccCCcchHH----HHHH
Q 017025 188 HGMDIEGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSVHFRCVDENSWG----TLAE 263 (379)
Q Consensus 188 nGa~I~~~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~~~~~l~~~~r~vd~~~~~----~l~e 263 (379)
||++++.+++ + . ..-..-+| .+.+.+.++.+++++||+++|.++..+.|||++++++... ++.+
T Consensus 564 hG~f~r~~~~-w-~-------~~~~~~~w---~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~ 631 (732)
T KOG1050|consen 564 HGYFVRIPGK-W-E-------TCVLDLDW---KDLVKDIFQYYTERTPGSYIERKETALVWHYRNADPEFGELQAKELLE 631 (732)
T ss_pred cCceeccCCc-e-e-------eecccccH---HHHHHHHHHHHHhcCCCceecccCceEEEeeeccCcchhHHHHHHHHH
Confidence 9999999866 2 1 11122334 4556666777789999999999999999999999876433 3444
Q ss_pred HHHHHHhhCCCcEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcC------Ce
Q 017025 264 QVRVVLDKYPKLTLTQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRG------QG 337 (379)
Q Consensus 264 ~v~~vl~~~p~l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~------~G 337 (379)
.+.. .+ ..+.+..|+..+|++|. |++||.|+..++..+. .+.++++|+||+++|++||.++.... +-
T Consensus 632 ~l~~--~~-~~~~v~~g~~~Vev~~~-gvsk~~~~~~~~~~~~---~~~df~~c~g~d~tDed~~~~~~~~~~~~~~~~~ 704 (732)
T KOG1050|consen 632 HLES--KN-EPVEVVRGKHIVEVRPQ-GVSKGLAAERILSEMV---KEPDFVLCIGDDRTDEDMFEFISKAKDPEKVEEI 704 (732)
T ss_pred Hhcc--cC-CCeEEEecCceEEEccc-ccchHHHHHHHHHhcC---CCcceEEEecCCCChHHHHHHHhhccCCcccceE
Confidence 4433 23 35888999999999999 9999999999999988 23469999999999999999976532 24
Q ss_pred EEEEecCCCCCCcceEEeCCHHHHHHHHH
Q 017025 338 FGILVSKTPKETHASYSLQEPSEVKDFLR 366 (379)
Q Consensus 338 ~gVaVgna~~~t~A~y~l~d~~eV~~~L~ 366 (379)
|.++||. +.+.|.|.+.++.+|.+.|+
T Consensus 705 F~~~~g~--~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 705 FACTVGQ--KPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred EEEEcCC--CCcccccccCChHHHHhhcc
Confidence 6777776 78999999999999998775
No 34
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.88 E-value=2.3e-22 Score=190.62 Aligned_cols=218 Identities=23% Similarity=0.282 Sum_probs=131.4
Q ss_pred cEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc---c-cCceEEecCCceEecCC
Q 017025 122 KIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK---L-AGLYYAGSHGMDIEGPS 196 (379)
Q Consensus 122 ~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~---l-~~l~li~~nGa~I~~~~ 196 (379)
+++|++|+||||++. ......++.+.++...+. +.|+++|||+...+.+++. + .+.++|+++|+.|+...
T Consensus 2 ~~ll~sDlD~Tl~~~-----~~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~ 76 (247)
T PF05116_consen 2 PRLLASDLDGTLIDG-----DDEALARLEELLEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGE 76 (247)
T ss_dssp SEEEEEETBTTTBHC-----HHHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESS
T ss_pred CEEEEEECCCCCcCC-----CHHHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcC
Confidence 689999999999921 112233444444411122 5899999999999988763 3 34589999999999843
Q ss_pred CccccccCCCccccCCCccchhHHHHHHHHHHHHhccCCCcE----EEeccceEEEeeccCCcchHHHHHHHHHHHHhhC
Q 017025 197 KKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAK----VENNKFCLSVHFRCVDENSWGTLAEQVRVVLDKY 272 (379)
Q Consensus 197 ~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~----iE~~~~~l~~~~r~vd~~~~~~l~e~v~~vl~~~ 272 (379)
. +..+..|.. .....|.. +.+.+.+.+ +++.. .+.+.+++++.++.... ..+.+.++..++..
T Consensus 77 ~---~~~d~~w~~-~i~~~w~~--~~v~~~l~~----~~~l~~q~~~~q~~~k~sy~~~~~~~---~~~~~~i~~~l~~~ 143 (247)
T PF05116_consen 77 N---WQPDEEWQA-HIDERWDR--ERVEEILAE----LPGLRPQPESEQRPFKISYYVDPDDS---ADILEEIRARLRQR 143 (247)
T ss_dssp T---TEE-HHHHH-HHHTT--H--HHHHHHHHC----HCCEEEGGCCCGCCTCECEEEETTSH---CHHHHHHHHHHHCC
T ss_pred C---CcChHHHHH-HHHhcCCh--HHHHHHHHH----hhCcccCCccccCCeeEEEEEecccc---hhHHHHHHHHHHHc
Confidence 1 111112211 11123322 333344333 33322 23345666666654322 23446666666654
Q ss_pred CCcE--E-EeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCCC-
Q 017025 273 PKLT--L-TQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPKE- 348 (379)
Q Consensus 273 p~l~--v-~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~~- 348 (379)
++. + .++...++|.|. +.+||.||++|+++++++.+ .++++|||.||++||... ..||+|+|+..+
T Consensus 144 -~l~~~~i~s~~~~ldilP~-~a~K~~Al~~L~~~~~~~~~---~vl~aGDSgND~~mL~~~-----~~~vvV~Na~~e~ 213 (247)
T PF05116_consen 144 -GLRVNVIYSNGRDLDILPK-GASKGAALRYLMERWGIPPE---QVLVAGDSGNDLEMLEGG-----DHGVVVGNAQPEL 213 (247)
T ss_dssp -TCEEEEEECTCCEEEEEET-T-SHHHHHHHHHHHHT--GG---GEEEEESSGGGHHHHCCS-----SEEEE-TTS-HHH
T ss_pred -CCCeeEEEccceeEEEccC-CCCHHHHHHHHHHHhCCCHH---HEEEEeCCCCcHHHHcCc-----CCEEEEcCCCHHH
Confidence 443 3 356788999999 99999999999999999864 899999999999999654 689999999755
Q ss_pred -------Ccc-e--EEeC--CHHHHHHHHHH
Q 017025 349 -------THA-S--YSLQ--EPSEVKDFLRR 367 (379)
Q Consensus 349 -------t~A-~--y~l~--d~~eV~~~L~~ 367 (379)
... . |..+ -..+|++-|++
T Consensus 214 ~~~~~~~~~~~~~iy~a~~~~a~GIlegl~~ 244 (247)
T PF05116_consen 214 LSWLLEKLRQQERIYFAQGPYAAGILEGLQH 244 (247)
T ss_dssp HHHHHHCC-TTE--EE-SS-THHHHHHHHHH
T ss_pred HHHHHHhcccCCceEecCCCCcHHHHHHHHH
Confidence 111 1 5554 34577777765
No 35
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.87 E-value=1.3e-20 Score=197.34 Aligned_cols=234 Identities=16% Similarity=0.162 Sum_probs=143.2
Q ss_pred cCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhccc--cCceEEecCCceEecC
Q 017025 119 KGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVKL--AGLYYAGSHGMDIEGP 195 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~l--~~l~li~~nGa~I~~~ 195 (379)
.-++++||+|+||||++. ...++++++++|++|+++ ++|+|||||+...+..+... ...++|++||+.|+.+
T Consensus 413 ~~~~KLIfsDLDGTLLd~-----d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~ 487 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLNP-----LTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIP 487 (694)
T ss_pred CceeeEEEEECcCCCcCC-----CCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEEC
Confidence 336789999999999994 235778899999999999 69999999999998877642 2247999999999987
Q ss_pred CCccc--ccc---CCCccccCCCccchhHHHHHHHHHHHHhc-------cCCCcEEEec-cc------eE---EE-----
Q 017025 196 SKKRR--YKK---GNHGVLCQPASEFLPMINEVYQTLLEKTK-------SIPGAKVENN-KF------CL---SV----- 248 (379)
Q Consensus 196 ~~~~~--~~~---~~e~~~~~~~~~~~~~i~ev~~~l~~~~~-------~~~g~~iE~~-~~------~l---~~----- 248 (379)
.+... ... .....++...-. .+.+.++++.+.+... ...+.++... .. .+ ..
T Consensus 488 ~~~~~~~~~~~~~~~~~iI~~~~l~-~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~~~~a~~ 566 (694)
T PRK14502 488 KDYFRLPFAYDRVAGNYLVIELGMA-YKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLNLKQAEL 566 (694)
T ss_pred CCcccccccccccCCCeEEEEcCCC-HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCCHHHHHH
Confidence 64110 000 001111111111 1334455554433110 0001111110 00 00 00
Q ss_pred -eeccCCcc-hH---HHHHHHHHHHHhhCCCcEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEE--cCC
Q 017025 249 -HFRCVDEN-SW---GTLAEQVRVVLDKYPKLTLTQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYI--GDD 321 (379)
Q Consensus 249 -~~r~vd~~-~~---~~l~e~v~~vl~~~p~l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~--GD~ 321 (379)
..|...++ .| .+..+.+...++.. ++.+..++.++||. . ++|||+||++|++.+|++.+ ++++| ||+
T Consensus 567 a~~Re~seKIl~~gd~e~Leel~~~L~~~-~l~v~~g~rfleI~-~-gvdKG~AL~~L~e~~gI~~~---eViafalGDs 640 (694)
T PRK14502 567 AKQREYSETVHIEGDKRSTNIVLNHIQQS-GLEYSFGGRFYEVT-G-GNDKGKAIKILNELFRLNFG---NIHTFGLGDS 640 (694)
T ss_pred HhhccCceeEEEcCCHHHHHHHHHHHHHc-CcEEEECCEEEEeC-C-CCCHHHHHHHHHHHhCCCcc---ceEEEEcCCc
Confidence 00000000 00 12334444445544 67777799999998 7 89999999999999998864 56666 999
Q ss_pred cCCHHHHHHHHhcCCeEEEEecCCCCCC------cceEEe-CCHHHHHHHHHHHH
Q 017025 322 RTDEDAFKVLRNRGQGFGILVSKTPKET------HASYSL-QEPSEVKDFLRRLV 369 (379)
Q Consensus 322 ~NDe~mf~~~~~~~~G~gVaVgna~~~t------~A~y~l-~d~~eV~~~L~~Lv 369 (379)
.||++||+++ |+||+|++...+- ...+.- ..|.+=.+.+++++
T Consensus 641 ~NDisMLe~A-----g~gVAM~~~~~~~~~l~~~~~~~~~~~GP~GW~eai~~~L 690 (694)
T PRK14502 641 ENDYSMLETV-----DSPILVQRPGNKWHKMRLRNPSYVKGVGPEGFSRAVTDII 690 (694)
T ss_pred HhhHHHHHhC-----CceEEEcCCCCCCCccCCCCceecCCCCcHHHHHHHHHHH
Confidence 9999999998 8999998865321 111211 25666555555554
No 36
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.86 E-value=4.4e-21 Score=179.46 Aligned_cols=197 Identities=20% Similarity=0.277 Sum_probs=120.1
Q ss_pred EEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcccc--CceEEecCCceEecCCCccc
Q 017025 124 VMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVKLA--GLYYAGSHGMDIEGPSKKRR 200 (379)
Q Consensus 124 liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~l~--~l~li~~nGa~I~~~~~~~~ 200 (379)
++|+|+||||+.. + .++++++++|++|+++ ++++++|||+...+..++... ..++|++||+.|+.+.+...
T Consensus 1 li~~DlDGTLl~~-----~-~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~ 74 (225)
T TIGR02461 1 VIFTDLDGTLLPP-----G-YEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFP 74 (225)
T ss_pred CEEEeCCCCCcCC-----C-CCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCcccc
Confidence 5899999999982 1 3567899999999999 699999999999988876321 23799999999998743100
Q ss_pred cc-----cCCCccccCCCccchhHHHHHHHHHHHHhccCCCcEEEe---ccc----eEE---------Eeecc---C-Cc
Q 017025 201 YK-----KGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVEN---NKF----CLS---------VHFRC---V-DE 255 (379)
Q Consensus 201 ~~-----~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~iE~---~~~----~l~---------~~~r~---v-d~ 255 (379)
.. ......++...-. .+.+.++++.+.+. .+-....+ ... .+. ..+.. . ++
T Consensus 75 ~~~~~~~~~~~~~i~~~~l~-~~~~~~il~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~ 150 (225)
T TIGR02461 75 FPVGAGREVGNYEVIELGKP-VAKIRAALKEAENE---YGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLWSR 150 (225)
T ss_pred ccccccccCCCeEEEEcCCC-HHHHHHHHHHHHHh---cCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCCCH
Confidence 00 0000011111000 12344454444330 00000000 000 000 00000 0 11
Q ss_pred chHHHHHHHHHHHHhhCCCcEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcC
Q 017025 256 NSWGTLAEQVRVVLDKYPKLTLTQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRG 335 (379)
Q Consensus 256 ~~~~~l~e~v~~vl~~~p~l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~ 335 (379)
+.+.++.+ .++. .++.+.++..++++ +. ++|||.|+++|++.+++... .+.+++|||+.||++||+.+
T Consensus 151 e~~~~~~~----~~~~-~~~~~~~s~~~~~i-~~-~~sK~~al~~l~~~~~~~~~-~~~~i~~GD~~nD~~ml~~a---- 218 (225)
T TIGR02461 151 EGWEAILV----TARA-RGLKYTHGGRFYTV-HG-GSDKGKAIKRLLDLYKLRPG-AIESVGLGDSENDFPMFEVV---- 218 (225)
T ss_pred HHHHHHHH----HHHH-cCCcEEECCEEEEE-CC-CCCHHHHHHHHHHHhccccC-cccEEEEcCCHHHHHHHHhC----
Confidence 11222222 2233 35777777777875 77 99999999999999977431 23799999999999999998
Q ss_pred CeEEEEec
Q 017025 336 QGFGILVS 343 (379)
Q Consensus 336 ~G~gVaVg 343 (379)
|+||+||
T Consensus 219 -g~~v~v~ 225 (225)
T TIGR02461 219 -DLAFLVG 225 (225)
T ss_pred -CCcEecC
Confidence 8999986
No 37
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.84 E-value=3.7e-20 Score=177.35 Aligned_cols=200 Identities=15% Similarity=0.188 Sum_probs=128.8
Q ss_pred EEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhccc--cCceEEecCCceEecCCCcc
Q 017025 123 IVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVKL--AGLYYAGSHGMDIEGPSKKR 199 (379)
Q Consensus 123 ~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~l--~~l~li~~nGa~I~~~~~~~ 199 (379)
++||+|+||||+++ ...+++.++++|++|+++ ++|++||||+...+..+... ...++|++||+.|+.+.+..
T Consensus 2 KLIftDLDGTLLd~-----~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~~~ 76 (302)
T PRK12702 2 RLVLSSLDGSLLDL-----EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEHYF 76 (302)
T ss_pred cEEEEeCCCCCcCC-----CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccccc
Confidence 68999999999995 236788999999999999 79999999999998887642 12389999999999885421
Q ss_pred cc--------ccCCCccccCCCccchhHHHHHHHHHHHHh-ccC--------------CCcEEE------eccceEEEee
Q 017025 200 RY--------KKGNHGVLCQPASEFLPMINEVYQTLLEKT-KSI--------------PGAKVE------NNKFCLSVHF 250 (379)
Q Consensus 200 ~~--------~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~-~~~--------------~g~~iE------~~~~~l~~~~ 250 (379)
.. ....-++ +..... .+.+..+++.+.... ..+ .|.-.+ .+.|+..+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~-~~lg~~-y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w 154 (302)
T PRK12702 77 PAGILDEQWQHRPPYYV-CALGLP-YPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSY 154 (302)
T ss_pred cccccccccccCCCceE-EecCCC-HHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEe
Confidence 00 0000010 011111 122333333332210 001 111111 1223333333
Q ss_pred ccCCcchHHHHHHHHHHHHhhCCCcEEEeCCeEEEEEc---------------------CCCCCHHHHHHHHHHHhCCCC
Q 017025 251 RCVDENSWGTLAEQVRVVLDKYPKLTLTQGRMVLEIRP---------------------TIKWDKGKALEFLLEALGYAN 309 (379)
Q Consensus 251 r~vd~~~~~~l~e~v~~vl~~~p~l~v~~g~~~lEI~P---------------------~~g~sKG~Al~~Lle~lg~~~ 309 (379)
..-++ .+ .+.+++. ++.+++|..++.+.. - +.+||.|+++|++.+.-..
T Consensus 155 ~~~~~----~~----~~~~~~~-g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~-~~dKg~A~~~L~~~y~~~~ 224 (302)
T PRK12702 155 SGDPA----RL----REAFAQQ-EANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPN-SLPGEQAVQLLLDCYQRHL 224 (302)
T ss_pred cCCHH----HH----HHHHHHc-CCeEEecCceEEecccccccccccccccccccccccC-CCCHHHHHHHHHHHHHhcc
Confidence 32111 11 4445544 788999888888875 2 5699999999999986543
Q ss_pred CCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCC
Q 017025 310 SKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKT 345 (379)
Q Consensus 310 ~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna 345 (379)
....+|++|||.||++||+++ .++|+|-+.
T Consensus 225 -~~~~tiaLGDspND~~mLe~~-----D~~vvi~~~ 254 (302)
T PRK12702 225 -GPIKALGIGCSPPDLAFLRWS-----EQKVVLPSP 254 (302)
T ss_pred -CCceEEEecCChhhHHHHHhC-----CeeEEecCC
Confidence 235799999999999999999 699999654
No 38
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=99.78 E-value=4.6e-23 Score=218.85 Aligned_cols=307 Identities=30% Similarity=0.327 Sum_probs=239.7
Q ss_pred CcchhhHHHHHHhcCCCCcCCCCCCC-----CCchhhhhhh-hcCCCccccHHHHHHhccCCcEEEEEeCCCccCCCCCC
Q 017025 66 GNKINAWVNSLRASSPTRLKSSIAFS-----PQTEEQTSWI-ARHPSALSKFEEIVNASKGKKIVMFLDYDGTLAPIVED 139 (379)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~w~-~~~psal~~f~~~~~~~~~k~~liflD~DGTLl~~~~~ 139 (379)
....+.|+++|+ ++|++-+.-..+. ......++|+ ..||+++.+||.+...+..+++|.++|+||||.++..+
T Consensus 128 ~~f~d~ive~~~-~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d 206 (732)
T KOG1050|consen 128 QAFADKIVEVYE-EGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDD 206 (732)
T ss_pred HHHHHHHHHhcc-CCCcEEEEcchhhccchhhhcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCcccccccc
Confidence 456789999999 9999865433221 1234479999 78999999999999989999999999999999999999
Q ss_pred CCcccCCHHHHHHHHHHHhcCCEEEEcCCChhh----------HHhhccccCceEEecCCceEecCCCccccccCCCccc
Q 017025 140 PDRAFMTNEMREAVRDVARYFPTAIVTGRCRDK----------VFSFVKLAGLYYAGSHGMDIEGPSKKRRYKKGNHGVL 209 (379)
Q Consensus 140 pd~~~~s~~~~~aL~~L~~~~~vaIaTGR~~~~----------l~~~~~l~~l~li~~nGa~I~~~~~~~~~~~~~e~~~ 209 (379)
+++++++-.++....+..++++.++++||++.. +.++++..++++++++|++|..+.+......+...+.
T Consensus 207 ~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d 286 (732)
T KOG1050|consen 207 YARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLD 286 (732)
T ss_pred HHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccc
Confidence 999999999999999999999999999999887 7778888999999999999998863221111100000
Q ss_pred cCCCccchhHHHHHHHHHHHH--------------hccCCCcEEEeccceEEEeeccCCcchHHHHHHHHHHHHhhCCCc
Q 017025 210 CQPASEFLPMINEVYQTLLEK--------------TKSIPGAKVENNKFCLSVHFRCVDENSWGTLAEQVRVVLDKYPKL 275 (379)
Q Consensus 210 ~~~~~~~~~~i~ev~~~l~~~--------------~~~~~g~~iE~~~~~l~~~~r~vd~~~~~~l~e~v~~vl~~~p~l 275 (379)
........+....+.|.++ ..+.++..+++.++|++.||++++++.+....+.+..+.+.+|.+
T Consensus 287 --~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~ 364 (732)
T KOG1050|consen 287 --SIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFL 364 (732)
T ss_pred --cccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHH
Confidence 0000001112222233322 234555556777889999999998877665556666667777778
Q ss_pred EEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCC--CCCccEEEEcCCcCCHHHHHHHHhc-CCeEEEEecCCCCCCcce
Q 017025 276 TLTQGRMVLEIRPTIKWDKGKALEFLLEALGYAN--SKDVVPVYIGDDRTDEDAFKVLRNR-GQGFGILVSKTPKETHAS 352 (379)
Q Consensus 276 ~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~--~~~~~vi~~GD~~NDe~mf~~~~~~-~~G~gVaVgna~~~t~A~ 352 (379)
+++++..+.|++|.+.|.||.++..+...++.+. +.+....|+||+.+|++.+..++.. +++++++|+.+...+.+.
T Consensus 365 ~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e 444 (732)
T KOG1050|consen 365 ELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEE 444 (732)
T ss_pred HHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHH
Confidence 8888999999999999999999999999999887 6677889999999999999988776 567899999998889999
Q ss_pred EEeCCHHHHHH-HHHHHHHhhhhh
Q 017025 353 YSLQEPSEVKD-FLRRLVQWKRLS 375 (379)
Q Consensus 353 y~l~d~~eV~~-~L~~Lv~~~~~~ 375 (379)
+.++.+..+.. +...++.|.+..
T Consensus 445 ~~~r~~~~~~~v~~~~~~~W~~~~ 468 (732)
T KOG1050|consen 445 RELREPKHYKYVSTHDVVYWAKSF 468 (732)
T ss_pred HhhcchhhhhhhcchhHHHHHHHH
Confidence 99999888877 777888886653
No 39
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.63 E-value=9.3e-15 Score=133.20 Aligned_cols=203 Identities=19% Similarity=0.285 Sum_probs=125.7
Q ss_pred CcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhh---ccccCceEEecCCceEecCC
Q 017025 121 KKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSF---VKLAGLYYAGSHGMDIEGPS 196 (379)
Q Consensus 121 k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~---~~l~~l~li~~nGa~I~~~~ 196 (379)
...+||+|+||||+++.-+| ......+.+|.+. +++++||.+++..+..+ ++++++++|++||+.|+.|.
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~------~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEW------QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred cceEEEEcccCcccCCCCCC------CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 35799999999999965444 3456789999999 69999999999876654 56777899999999999986
Q ss_pred Cccccc-cCCCc--cccCCCccchhHHHHHHHHHHHHhccCCCcE-EE----------------------eccceEEEee
Q 017025 197 KKRRYK-KGNHG--VLCQPASEFLPMINEVYQTLLEKTKSIPGAK-VE----------------------NNKFCLSVHF 250 (379)
Q Consensus 197 ~~~~~~-~~~e~--~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~-iE----------------------~~~~~l~~~~ 250 (379)
+-..+. ..++. ........-++.|++..+.|.+. =|.. +. .++++.++..
T Consensus 80 ~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~----~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~ 155 (274)
T COG3769 80 GWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEH----FGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIW 155 (274)
T ss_pred cccccCCCCceecceEeeehhhhHHHHHHHHHHHHHH----hCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheee
Confidence 532111 00000 00001111122233333333221 1111 00 0111111222
Q ss_pred ccCCcchHHHHHHHHHHHHhhCCCcEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHH
Q 017025 251 RCVDENSWGTLAEQVRVVLDKYPKLTLTQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKV 330 (379)
Q Consensus 251 r~vd~~~~~~l~e~v~~vl~~~p~l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~ 330 (379)
|.-+ ....+....|.+ -+|.+++|..+..+.-. ...||.|+.+|++.+-.-.+. ..+++.||+.||.+||++
T Consensus 156 rs~d-----~~~~~~~~~L~e-~glt~v~garf~~v~~a-s~gKg~Aa~~ll~~y~rl~~~-r~t~~~GDg~nD~Pl~ev 227 (274)
T COG3769 156 RSSD-----ERMAQFTARLNE-RGLTFVHGARFWHVLDA-SAGKGQAANWLLETYRRLGGA-RTTLGLGDGPNDAPLLEV 227 (274)
T ss_pred cccc-----hHHHHHHHHHHh-cCceEEeccceEEEecc-ccCccHHHHHHHHHHHhcCce-eEEEecCCCCCcccHHHh
Confidence 2111 111222333433 37899999888888777 667999999999976433321 148999999999999999
Q ss_pred HHhcCCeEEEEecCCC
Q 017025 331 LRNRGQGFGILVSKTP 346 (379)
Q Consensus 331 ~~~~~~G~gVaVgna~ 346 (379)
+ .+++.|++-.
T Consensus 228 ~-----d~AfiV~~ln 238 (274)
T COG3769 228 M-----DYAFIVKGLN 238 (274)
T ss_pred h-----hhheeecccc
Confidence 8 6999999643
No 40
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=99.43 E-value=4.9e-12 Score=113.83 Aligned_cols=214 Identities=21% Similarity=0.290 Sum_probs=139.5
Q ss_pred cCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhccc----cCceEEecCCceEec
Q 017025 119 KGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVKL----AGLYYAGSHGMDIEG 194 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~~vaIaTGR~~~~l~~~~~l----~~l~li~~nGa~I~~ 194 (379)
+..+.|+.||.||||++. +..+++++.+.|.+|++...+.++-|..+.++.+.++. .-.|...+||..-+.
T Consensus 8 r~~~~l~lfdvdgtLt~~-----r~~~~~e~~~~l~~lr~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~~yk 82 (252)
T KOG3189|consen 8 RDEETLCLFDVDGTLTPP-----RQKVTPEMLEFLQKLRKKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLVAYK 82 (252)
T ss_pred cCCceEEEEecCCccccc-----cccCCHHHHHHHHHHhhheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCeeEee
Confidence 455678999999999993 67899999999999999999999999999999998863 234889999998776
Q ss_pred CCCccccccCCCccccCCCccch--hHHHHHHHHHHHHhcc-----CCCcEEEeccceEEEe--eccCCcchH-------
Q 017025 195 PSKKRRYKKGNHGVLCQPASEFL--PMINEVYQTLLEKTKS-----IPGAKVENNKFCLSVH--FRCVDENSW------- 258 (379)
Q Consensus 195 ~~~~~~~~~~~e~~~~~~~~~~~--~~i~ev~~~l~~~~~~-----~~g~~iE~~~~~l~~~--~r~vd~~~~------- 258 (379)
.+... ..|....|+ +.+.++......|+.. -.|.++|-+...+.+. -|++..++.
T Consensus 83 ~gk~~---------~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~D 153 (252)
T KOG3189|consen 83 GGKLL---------SKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELD 153 (252)
T ss_pred CCcch---------hHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhh
Confidence 54321 001111111 1222333222222221 2488899776655544 344443221
Q ss_pred --HHHHHH-HHHHHhhCC--CcEEE-eCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcC----CcCCHHHH
Q 017025 259 --GTLAEQ-VRVVLDKYP--KLTLT-QGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGD----DRTDEDAF 328 (379)
Q Consensus 259 --~~l~e~-v~~vl~~~p--~l~v~-~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD----~~NDe~mf 328 (379)
..+.+. +.++.++|. +|... .|..++||.|. ||+|-..|++|-+. |++ .+.+||| +.||.+.|
T Consensus 154 kk~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~-GWDKtyCLqhle~d-gf~-----~IhFFGDkT~~GGNDyEIf 226 (252)
T KOG3189|consen 154 KKHKIREKFVEALREEFADYGLTFSIGGQISFDVFPK-GWDKTYCLQHLEKD-GFD-----TIHFFGDKTMPGGNDYEIF 226 (252)
T ss_pred hhhhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCC-CcchhHHHHHhhhc-CCc-----eEEEeccccCCCCCcceee
Confidence 122222 222333444 46654 45689999999 99999999998776 775 6999999 56887776
Q ss_pred HHHHhcCCeEEEEecCCCCCCcceEEeCCHHHHHHHHHHHHH
Q 017025 329 KVLRNRGQGFGILVSKTPKETHASYSLQEPSEVKDFLRRLVQ 370 (379)
Q Consensus 329 ~~~~~~~~G~gVaVgna~~~t~A~y~l~d~~eV~~~L~~Lv~ 370 (379)
.--+. . -|++.+|++....++.++.
T Consensus 227 ~dprt----i-------------GhsV~~PdDT~~~~~~if~ 251 (252)
T KOG3189|consen 227 ADPRT----I-------------GHSVTSPDDTVRICEEIFK 251 (252)
T ss_pred eCCcc----c-------------cccccCchHHHHHHHHHhc
Confidence 54322 1 2345677777777776653
No 41
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=99.32 E-value=6.9e-12 Score=115.49 Aligned_cols=189 Identities=19% Similarity=0.294 Sum_probs=122.2
Q ss_pred HHHHHHHHHhcCCEEEEcCCChhhHHhhcc-c----cCceEEecCCceEecCCCccccccCCCccccCCCccch--hHHH
Q 017025 149 MREAVRDVARYFPTAIVTGRCRDKVFSFVK-L----AGLYYAGSHGMDIEGPSKKRRYKKGNHGVLCQPASEFL--PMIN 221 (379)
Q Consensus 149 ~~~aL~~L~~~~~vaIaTGR~~~~l~~~~~-l----~~l~li~~nGa~I~~~~~~~~~~~~~e~~~~~~~~~~~--~~i~ 221 (379)
|.+.|++|.+...++|+||..+.++.+.+. . ...|+..+||...+..+...+ .+ .-.+++ +.+.
T Consensus 1 M~~~L~~L~~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~-~~--------~~~~~lgee~~~ 71 (220)
T PF03332_consen 1 MAELLQKLRKKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIW-SQ--------SIAEFLGEEKLQ 71 (220)
T ss_dssp HHHHHHHHHTTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEE-E----------HHHHHHHHHHH
T ss_pred CHHHHHHHHhcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchh-hH--------hHHHHcCHHHHH
Confidence 678999999999999999999999999873 2 234899999999987654321 11 001111 1223
Q ss_pred HHHHHHHHHhc-----cCCCcEEEeccceEEEee--ccCCcc---hHH------HHHHHH-HHHHhhCCC--cEEE-eCC
Q 017025 222 EVYQTLLEKTK-----SIPGAKVENNKFCLSVHF--RCVDEN---SWG------TLAEQV-RVVLDKYPK--LTLT-QGR 281 (379)
Q Consensus 222 ev~~~l~~~~~-----~~~g~~iE~~~~~l~~~~--r~vd~~---~~~------~l~e~v-~~vl~~~p~--l~v~-~g~ 281 (379)
++.+.+..+.. .-.|.++|.+...+.+.. |+++.+ .|. .+.+.+ +.+-+++|+ |++. -|.
T Consensus 72 ~~in~~l~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGq 151 (220)
T PF03332_consen 72 KLINFCLRYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQ 151 (220)
T ss_dssp HHHHHHHHHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETT
T ss_pred HHHHHHHHHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCc
Confidence 33333333321 235889999988887764 455432 121 123333 334457886 6665 467
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcC----CcCCHHHHHHHHhcCCeEEEEecCCCCCCcceEEeCC
Q 017025 282 MVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGD----DRTDEDAFKVLRNRGQGFGILVSKTPKETHASYSLQE 357 (379)
Q Consensus 282 ~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD----~~NDe~mf~~~~~~~~G~gVaVgna~~~t~A~y~l~d 357 (379)
.++||.|+ ||||..+|++|.+.. + +++++||| +.||.++|..-+ -.|+ .+.+
T Consensus 152 iSiDvfp~-GwDKty~Lr~l~~~~-~-----~~I~FfGDkt~pGGNDyei~~~~r----t~g~-------------~V~~ 207 (220)
T PF03332_consen 152 ISIDVFPK-GWDKTYCLRHLEDEG-F-----DEIHFFGDKTFPGGNDYEIFEDPR----TIGH-------------TVTS 207 (220)
T ss_dssp TEEEEEET-T-SGGGGGGGTTTTT-------SEEEEEESS-STTSTTHHHHHSTT----SEEE-------------E-SS
T ss_pred eEEccccC-CccHHHHHHHHHhcc-c-----ceEEEEehhccCCCCCceeeecCC----ccEE-------------EeCC
Confidence 89999999 999999999987753 3 38999999 669999998642 2344 3578
Q ss_pred HHHHHHHHHHHHH
Q 017025 358 PSEVKDFLRRLVQ 370 (379)
Q Consensus 358 ~~eV~~~L~~Lv~ 370 (379)
|++.++.|++|+.
T Consensus 208 p~DT~~~l~~l~~ 220 (220)
T PF03332_consen 208 PEDTIKQLKELFF 220 (220)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999873
No 42
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.25 E-value=1e-10 Score=128.83 Aligned_cols=188 Identities=13% Similarity=0.145 Sum_probs=107.5
Q ss_pred cEEEE--EeCCCccCCCCCCCCcccCCHHHHHHHHHHHh--c---CCEEEEcCCChhhHHhhc---ccc---CceEEecC
Q 017025 122 KIVMF--LDYDGTLAPIVEDPDRAFMTNEMREAVRDVAR--Y---FPTAIVTGRCRDKVFSFV---KLA---GLYYAGSH 188 (379)
Q Consensus 122 ~~lif--lD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~--~---~~vaIaTGR~~~~l~~~~---~l~---~l~li~~n 188 (379)
+++++ +|+|+| +. +.+.+++.++.+.+ . ..|+++|||++..+..++ ++| +.++||+-
T Consensus 770 ~~~~via~D~d~~-~~---------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~v 839 (1050)
T TIGR02468 770 KRLFVIAVDCYDD-KD---------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNS 839 (1050)
T ss_pred ceEEEEEeccCCC-CC---------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCC
Confidence 45555 999999 22 12223333333331 2 479999999999999976 343 45799999
Q ss_pred CceEecCCCc----cccccCCCccccCCCccchhHHHHHHHHHHHHhc--------cCCCcEEE----eccceEEEeecc
Q 017025 189 GMDIEGPSKK----RRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTK--------SIPGAKVE----NNKFCLSVHFRC 252 (379)
Q Consensus 189 Ga~I~~~~~~----~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~--------~~~g~~iE----~~~~~l~~~~r~ 252 (379)
|++||++... ..+..+..|.. .....|.. +.+.+.+..... .-++...+ .+.||+++....
T Consensus 840 GTeIyy~~~~~~~~~~~~~D~~w~~-hI~~rW~g--e~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~d 916 (1050)
T TIGR02468 840 GSELYYPSLNGSEEGKLVADQDYHS-HIEYRWGG--EGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVKD 916 (1050)
T ss_pred CcceeccCcCCCCCCCceECHHHHH-HHHccCCc--HHHHHHHHHHhhhcccccccccccceecChhhCCCceEEEEecC
Confidence 9999997311 00111111111 11233421 112222222221 11333433 244777765333
Q ss_pred CCcchHHHHHHHHHHHHhhCC-CcEEE--eCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccE-EEEcCCcC-CHH-
Q 017025 253 VDENSWGTLAEQVRVVLDKYP-KLTLT--QGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVP-VYIGDDRT-DED- 326 (379)
Q Consensus 253 vd~~~~~~l~e~v~~vl~~~p-~l~v~--~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~v-i~~GD~~N-De~- 326 (379)
.+. ....+.+++.|+... ..+++ ++..+|+|.|. ..|||.||++|+.+||++.+ .+ ++.||+.| |.+
T Consensus 917 ~~~---~~~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~-~ASKgqAlRyL~~rwgi~l~---~v~VfaGdSGntD~e~ 989 (1050)
T TIGR02468 917 PSK---VPPVKELRKLLRIQGLRCHAVYCRNGTRLNVIPL-LASRSQALRYLFVRWGIELA---NMAVFVGESGDTDYEG 989 (1050)
T ss_pred ccc---CccHHHHHHHHHhCCCceEEEeecCCcEeeeeeC-CCCHHHHHHHHHHHcCCChH---HeEEEeccCCCCCHHH
Confidence 221 112234444444321 22332 34589999999 99999999999999999986 56 67999999 955
Q ss_pred HHH
Q 017025 327 AFK 329 (379)
Q Consensus 327 mf~ 329 (379)
|+.
T Consensus 990 Ll~ 992 (1050)
T TIGR02468 990 LLG 992 (1050)
T ss_pred HhC
Confidence 543
No 43
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.16 E-value=1.2e-10 Score=102.65 Aligned_cols=72 Identities=25% Similarity=0.314 Sum_probs=61.5
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEeCCHH---HHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSLQEPS---EVKDFLRR 367 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l~d~~---eV~~~L~~ 367 (379)
+|..+++.+++++|++.+ .++++||+.||.+|++.+ |++++|.++.. +..|+|++..+. ++.++++.
T Consensus 76 ~k~~~~~~~~~~~~~~~~---~~~~vGDs~~D~~~~~~a-----g~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~ 147 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPE---NVAYIGDDLIDWPVMEKV-----GLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCEL 147 (154)
T ss_pred chHHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHH
Confidence 588999999999999875 899999999999999998 89999998864 367899987553 38999999
Q ss_pred HHHhh
Q 017025 368 LVQWK 372 (379)
Q Consensus 368 Lv~~~ 372 (379)
+++..
T Consensus 148 ~~~~~ 152 (154)
T TIGR01670 148 LLLAQ 152 (154)
T ss_pred HHHhh
Confidence 98754
No 44
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.06 E-value=4.3e-10 Score=101.97 Aligned_cols=56 Identities=30% Similarity=0.375 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEeC
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSLQ 356 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l~ 356 (379)
+|..+++.+++.+|++.+ +++||||+.||++|++.+ |++++|+++.. +..|+|++.
T Consensus 96 ~k~~~l~~~~~~~gl~~~---ev~~VGDs~~D~~~a~~a-----G~~~~v~~~~~~~~~~a~~v~~ 153 (183)
T PRK09484 96 NKLIAFSDLLEKLAIAPE---QVAYIGDDLIDWPVMEKV-----GLSVAVADAHPLLLPRADYVTR 153 (183)
T ss_pred cHHHHHHHHHHHhCCCHH---HEEEECCCHHHHHHHHHC-----CCeEecCChhHHHHHhCCEEec
Confidence 477899999999999874 899999999999999998 89999987643 367899986
No 45
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.03 E-value=8.7e-10 Score=98.93 Aligned_cols=70 Identities=20% Similarity=0.385 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEeCCH---HHHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSLQEP---SEVKDFLRR 367 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l~d~---~eV~~~L~~ 367 (379)
.|-..++.+++.+|++.+ ++++|||+.||++|++.+ |++++|+|+.. +..|+|++... ..+.++++.
T Consensus 82 pkp~~~~~~~~~l~~~~~---ev~~iGD~~nDi~~~~~a-----g~~~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~ 153 (169)
T TIGR02726 82 KKTEPYAQMLEEMNISDA---EVCYVGDDLVDLSMMKRV-----GLAVAVGDAVADVKEAAAYVTTARGGHGAVREVAEL 153 (169)
T ss_pred CCHHHHHHHHHHcCcCHH---HEEEECCCHHHHHHHHHC-----CCeEECcCchHHHHHhCCEEcCCCCCCCHHHHHHHH
Confidence 356789999999998764 899999999999999998 99999999974 47899987532 246777777
Q ss_pred HHH
Q 017025 368 LVQ 370 (379)
Q Consensus 368 Lv~ 370 (379)
++.
T Consensus 154 il~ 156 (169)
T TIGR02726 154 ILK 156 (169)
T ss_pred HHH
Confidence 765
No 46
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.91 E-value=8.1e-10 Score=108.81 Aligned_cols=66 Identities=23% Similarity=0.241 Sum_probs=56.0
Q ss_pred CCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEeC--CHHHHHHHHH
Q 017025 292 WDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSLQ--EPSEVKDFLR 366 (379)
Q Consensus 292 ~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l~--d~~eV~~~L~ 366 (379)
-.|+.+++.+++.+|++.+ ++++|||+.||++|++.+ |+||++ |+.+ +..|++.++ +-++|+-+|-
T Consensus 247 k~K~~~L~~la~~lgi~~~---qtIaVGDg~NDl~m~~~A-----GlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLA---QTVAIGDGANDLPMIKAA-----GLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChh---hEEEEECCHHHHHHHHHC-----CCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 4799999999999999875 899999999999999998 999999 7764 479999986 4556665553
No 47
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.85 E-value=9.6e-09 Score=85.45 Aligned_cols=56 Identities=20% Similarity=0.344 Sum_probs=44.2
Q ss_pred EEEEeCCCccCCCCCCC---CcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhccc
Q 017025 124 VMFLDYDGTLAPIVEDP---DRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVKL 179 (379)
Q Consensus 124 liflD~DGTLl~~~~~p---d~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~l 179 (379)
+++||+||||.+..... ....+.+.+.+.|++|+++ .+++|+|||....+...+..
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~ 60 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEE 60 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHH
Confidence 47899999999853210 1236788999999999998 69999999998888777643
No 48
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.55 E-value=1.3e-07 Score=83.76 Aligned_cols=72 Identities=15% Similarity=0.104 Sum_probs=54.4
Q ss_pred EEEEeCCCccCCCCCC------CCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHH---hhc--------cccCceEE
Q 017025 124 VMFLDYDGTLAPIVED------PDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVF---SFV--------KLAGLYYA 185 (379)
Q Consensus 124 liflD~DGTLl~~~~~------pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~---~~~--------~l~~l~li 185 (379)
+|++|+||||+..... -....+++.+.+++++++++ .+++++|||+...+. +++ ++|..+++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li 80 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVL 80 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEE
Confidence 4899999999984210 00147899999999999999 699999999987764 333 24545889
Q ss_pred ecCCceEecC
Q 017025 186 GSHGMDIEGP 195 (379)
Q Consensus 186 ~~nGa~I~~~ 195 (379)
++||+.+...
T Consensus 81 ~~~g~~~~~~ 90 (157)
T smart00775 81 LSPDRLFAAL 90 (157)
T ss_pred EcCCcchhhh
Confidence 9999987643
No 49
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.30 E-value=9.9e-06 Score=76.97 Aligned_cols=65 Identities=17% Similarity=0.196 Sum_probs=48.1
Q ss_pred EEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcC---CChhhHHhhc---cc--cCceEEecCCceEe
Q 017025 123 IVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTG---RCRDKVFSFV---KL--AGLYYAGSHGMDIE 193 (379)
Q Consensus 123 ~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTG---R~~~~l~~~~---~l--~~l~li~~nGa~I~ 193 (379)
++++||+||||+.. ...++ .+.++|++|+++ .+++++|| |+...+...+ ++ ....+++++|+.+.
T Consensus 2 ~~~~~D~DGtl~~~-----~~~i~-~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~ 75 (249)
T TIGR01457 2 KGYLIDLDGTMYKG-----KERIP-EAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATAD 75 (249)
T ss_pred CEEEEeCCCceEcC-----CeeCc-CHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHH
Confidence 47899999999983 23444 789999999999 69999995 8888777654 33 22247777777543
No 50
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.23 E-value=6.7e-05 Score=71.63 Aligned_cols=64 Identities=22% Similarity=0.249 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCc-CCHHHHHHHHhcCCeE-EEEecCCC-----C---CCcceEEeCCHHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDR-TDEDAFKVLRNRGQGF-GILVSKTP-----K---ETHASYSLQEPSEVKD 363 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~-NDe~mf~~~~~~~~G~-gVaVgna~-----~---~t~A~y~l~d~~eV~~ 363 (379)
+-..++.+++.+|++.+ ++++|||+. +|+.+=+.+ |+ +|.|..+. . +..++|++++..++.+
T Consensus 181 ~p~~~~~~~~~~~~~~~---~~~~vGD~~~~Di~~a~~~-----G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~ 252 (257)
T TIGR01458 181 SKTFFLEALRATGCEPE---EAVMIGDDCRDDVGGAQDC-----GMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVD 252 (257)
T ss_pred CHHHHHHHHHHhCCChh---hEEEECCCcHHHHHHHHHc-----CCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHH
Confidence 45578888999998765 899999996 898876666 44 67775431 1 1346789999999887
Q ss_pred HH
Q 017025 364 FL 365 (379)
Q Consensus 364 ~L 365 (379)
+|
T Consensus 253 ~l 254 (257)
T TIGR01458 253 LI 254 (257)
T ss_pred HH
Confidence 65
No 51
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.23 E-value=5.3e-07 Score=78.88 Aligned_cols=71 Identities=25% Similarity=0.348 Sum_probs=60.8
Q ss_pred CCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCCC--CcceEEeC---CHHHHHHHHH
Q 017025 292 WDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPKE--THASYSLQ---EPSEVKDFLR 366 (379)
Q Consensus 292 ~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~~--t~A~y~l~---d~~eV~~~L~ 366 (379)
-+|-.+.+.|++.+++..+ ++.|+||+.||+++|+.+ |++++|.++++. ..|+|+++ ....|.|+++
T Consensus 82 ~dK~~a~~~L~~~~~l~~e---~~ayiGDD~~Dlpvm~~v-----Gls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~d 153 (170)
T COG1778 82 SDKLAAFEELLKKLNLDPE---EVAYVGDDLVDLPVMEKV-----GLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCD 153 (170)
T ss_pred HhHHHHHHHHHHHhCCCHH---HhhhhcCccccHHHHHHc-----CCcccccccCHHHHHhhHhhhhccCcchHHHHHHH
Confidence 3899999999999999975 899999999999999998 999999999865 78999985 3445677776
Q ss_pred HHHH
Q 017025 367 RLVQ 370 (379)
Q Consensus 367 ~Lv~ 370 (379)
-++.
T Consensus 154 lil~ 157 (170)
T COG1778 154 LILQ 157 (170)
T ss_pred HHHH
Confidence 6554
No 52
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.13 E-value=5.5e-06 Score=80.06 Aligned_cols=73 Identities=19% Similarity=0.136 Sum_probs=55.2
Q ss_pred cCCcEEEEEeCCCccCCCCCCCCcccC-CHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhc---cccCc-eEEecCCceE
Q 017025 119 KGKKIVMFLDYDGTLAPIVEDPDRAFM-TNEMREAVRDVARY-FPTAIVTGRCRDKVFSFV---KLAGL-YYAGSHGMDI 192 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~~~pd~~~~-s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~---~l~~l-~li~~nGa~I 192 (379)
=....+|+|||||||++... ...+ +|.+.++|.+|+++ .+++|+|++++..+...+ ++... ..+.++|...
T Consensus 123 ~~~~kvIvFDLDgTLi~~~~---~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~ 199 (301)
T TIGR01684 123 FEPPHVVVFDLDSTLITDEE---PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKA 199 (301)
T ss_pred cccceEEEEecCCCCcCCCC---ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccc
Confidence 34567999999999999421 1223 59999999999999 699999999998887655 45432 3677788776
Q ss_pred ec
Q 017025 193 EG 194 (379)
Q Consensus 193 ~~ 194 (379)
..
T Consensus 200 ~~ 201 (301)
T TIGR01684 200 EE 201 (301)
T ss_pred cC
Confidence 54
No 53
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.12 E-value=4.5e-06 Score=71.38 Aligned_cols=52 Identities=15% Similarity=0.122 Sum_probs=40.0
Q ss_pred EEEEEeCCCccCCCCCCC-CcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHH
Q 017025 123 IVMFLDYDGTLAPIVEDP-DRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVF 174 (379)
Q Consensus 123 ~liflD~DGTLl~~~~~p-d~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~ 174 (379)
+++++|+||||+.....+ ....+.+++.++|+++++. +.++++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 479999999998742111 1134778999999999887 689999999987554
No 54
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.79 E-value=4.8e-05 Score=73.67 Aligned_cols=72 Identities=15% Similarity=0.080 Sum_probs=54.5
Q ss_pred cCCcEEEEEeCCCccCCCCCCCCcccC---CHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhc---cccCc-eEEecCCc
Q 017025 119 KGKKIVMFLDYDGTLAPIVEDPDRAFM---TNEMREAVRDVARY-FPTAIVTGRCRDKVFSFV---KLAGL-YYAGSHGM 190 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~~~pd~~~~---s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~---~l~~l-~li~~nGa 190 (379)
-...++++||+||||++. ...+ +|.+.++|.+|++. ..++|+|+.+...+...+ ++... ..+.++|.
T Consensus 125 ~~~~~~i~~D~D~TL~~~-----~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITD-----EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred eeeccEEEEecCCCccCC-----CCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence 455689999999999994 3345 69999999999999 589999988887777655 44432 35667777
Q ss_pred eEecC
Q 017025 191 DIEGP 195 (379)
Q Consensus 191 ~I~~~ 195 (379)
.....
T Consensus 200 i~~k~ 204 (303)
T PHA03398 200 KAGEY 204 (303)
T ss_pred ccccc
Confidence 66554
No 55
>PRK06769 hypothetical protein; Validated
Probab=97.70 E-value=0.00025 Score=63.66 Aligned_cols=64 Identities=20% Similarity=0.153 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCCC-C-----------CCcceEEeCCHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKTP-K-----------ETHASYSLQEPSE 360 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna~-~-----------~t~A~y~l~d~~e 360 (379)
+-..+..++++++++.+ ++++|||+.+|+.+=+.+ |+ +|.+..+. . +..++|++.++.+
T Consensus 95 ~p~~~~~~~~~l~~~p~---~~i~IGD~~~Di~aA~~a-----Gi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~e 166 (173)
T PRK06769 95 STGMLLQAAEKHGLDLT---QCAVIGDRWTDIVAAAKV-----NATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFED 166 (173)
T ss_pred CHHHHHHHHHHcCCCHH---HeEEEcCCHHHHHHHHHC-----CCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHH
Confidence 34567788888888764 899999999998877666 44 56665432 1 1346788888888
Q ss_pred HHHHH
Q 017025 361 VKDFL 365 (379)
Q Consensus 361 V~~~L 365 (379)
+.++|
T Consensus 167 l~~~l 171 (173)
T PRK06769 167 AVNWI 171 (173)
T ss_pred HHHHH
Confidence 87764
No 56
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.62 E-value=0.00061 Score=61.25 Aligned_cols=64 Identities=22% Similarity=0.231 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCCC-C----CCcc--eEEeCCHHHHHHHHH
Q 017025 295 GKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKTP-K----ETHA--SYSLQEPSEVKDFLR 366 (379)
Q Consensus 295 G~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna~-~----~t~A--~y~l~d~~eV~~~L~ 366 (379)
-..+..+++.+|+..+ ++++|||+.+|+.+-+.+ |+ .|.+..+. . +..+ ++++.+..++.++|.
T Consensus 106 p~~~~~~~~~l~~~~~---~~~~VgDs~~Di~~A~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 106 PGMLLSIAERLNIDLA---GSPMVGDSLRDLQAAAAA-----GVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred HHHHHHHHHHcCCChh---hEEEEeCCHHHHHHHHHC-----CCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 4577888899998865 899999999998887776 43 55554432 1 2345 788888888877654
No 57
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.47 E-value=0.00091 Score=61.84 Aligned_cols=62 Identities=18% Similarity=0.078 Sum_probs=46.7
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCCCC-----CCcceEEeCCHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKTPK-----ETHASYSLQEPSEVK 362 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna~~-----~t~A~y~l~d~~eV~ 362 (379)
.+...++.+++.+|++.+ ++++|||+.+|+++-+.+ |. .|.+..... ...|++++.+..++.
T Consensus 149 p~~~~~~~~~~~~~~~~~---~~~~igDs~~Di~aA~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~ 216 (222)
T PRK10826 149 PHPEVYLNCAAKLGVDPL---TCVALEDSFNGMIAAKAA-----RMRSIVVPAPEQQNDPRWALADVKLESLTELT 216 (222)
T ss_pred CCHHHHHHHHHHcCCCHH---HeEEEcCChhhHHHHHHc-----CCEEEEecCCccCchhhhhhhheeccCHHHHh
Confidence 456789999999999875 899999999999999887 54 555544321 135777777777754
No 58
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.45 E-value=0.00038 Score=65.90 Aligned_cols=59 Identities=22% Similarity=0.240 Sum_probs=43.7
Q ss_pred cHHHHHHhccCCc-EEEEEeCCCccCCCCCC--CCcccCCH---------------------------HHHHHHHHHHhc
Q 017025 110 KFEEIVNASKGKK-IVMFLDYDGTLAPIVED--PDRAFMTN---------------------------EMREAVRDVARY 159 (379)
Q Consensus 110 ~f~~~~~~~~~k~-~liflD~DGTLl~~~~~--pd~~~~s~---------------------------~~~~aL~~L~~~ 159 (379)
+-++|.+..++++ .+|+||+||||++.... -.....++ .+++.|+.+.++
T Consensus 50 ~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~ 129 (237)
T TIGR01672 50 SVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRR 129 (237)
T ss_pred EHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHC
Confidence 7789998887775 59999999999986541 00001122 278889999988
Q ss_pred -CCEEEEcCC
Q 017025 160 -FPTAIVTGR 168 (379)
Q Consensus 160 -~~vaIaTGR 168 (379)
.+++|||+|
T Consensus 130 G~~i~iVTnr 139 (237)
T TIGR01672 130 GDAIFFVTGR 139 (237)
T ss_pred CCEEEEEeCC
Confidence 589999999
No 59
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.40 E-value=0.00092 Score=74.13 Aligned_cols=62 Identities=23% Similarity=0.246 Sum_probs=48.8
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCCC--CcceEEe--CCHHHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPKE--THASYSL--QEPSEVKDFLR 366 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~~--t~A~y~l--~d~~eV~~~L~ 366 (379)
+|..+++.+.+. . ..+++|||+.||.+|++.+ |+||+||++... ..|++.+ ++.+++..+++
T Consensus 700 ~K~~~i~~l~~~----~---~~v~~vGDg~nD~~al~~A-----gvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 700 GKAEAIKRLQSQ----G---RQVAMVGDGINDAPALAQA-----DVGIAMGGGSDVAIETAAITLMRHSLMGVADALA 765 (834)
T ss_pred HHHHHHHHHhhc----C---CEEEEEeCCHHHHHHHHhC-----CeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHH
Confidence 477777776543 2 2699999999999999998 899999998643 5677765 57888888776
No 60
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.32 E-value=0.00033 Score=65.19 Aligned_cols=47 Identities=32% Similarity=0.356 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCC
Q 017025 292 WDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTP 346 (379)
Q Consensus 292 ~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~ 346 (379)
-.|..+++.+++.+|++.+ +++++|||.||.+||+.+ |++|++...+
T Consensus 143 ~~K~~~l~~~~~~~g~~~~---~~~a~gDs~nDlpml~~a-----g~~ia~n~~~ 189 (212)
T COG0560 143 EGKAKALRELAAELGIPLE---ETVAYGDSANDLPMLEAA-----GLPIAVNPKP 189 (212)
T ss_pred chHHHHHHHHHHHcCCCHH---HeEEEcCchhhHHHHHhC-----CCCeEeCcCH
Confidence 4799999999999999875 899999999999999998 8999987644
No 61
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.27 E-value=0.00028 Score=59.80 Aligned_cols=56 Identities=27% Similarity=0.402 Sum_probs=41.5
Q ss_pred EEEEEeCCCccCCCC---CCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCC--------hhhHHhhcc
Q 017025 123 IVMFLDYDGTLAPIV---EDPDRAFMTNEMREAVRDVARY-FPTAIVTGRC--------RDKVFSFVK 178 (379)
Q Consensus 123 ~liflD~DGTLl~~~---~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~--------~~~l~~~~~ 178 (379)
++++||+||||++.. ..-....+.+.++++|+.|++. .+++|+|+++ ...+..++.
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~ 68 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLE 68 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHH
Confidence 478999999999521 0011246778999999999988 6999999998 555555543
No 62
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.25 E-value=0.00044 Score=58.94 Aligned_cols=55 Identities=16% Similarity=0.201 Sum_probs=40.2
Q ss_pred EEEEEeCCCccCCCCCCCCcc-------cCCHHHHHHHHHHHhc-CCEEEEcCC-ChhhHHhhc
Q 017025 123 IVMFLDYDGTLAPIVEDPDRA-------FMTNEMREAVRDVARY-FPTAIVTGR-CRDKVFSFV 177 (379)
Q Consensus 123 ~liflD~DGTLl~~~~~pd~~-------~~s~~~~~aL~~L~~~-~~vaIaTGR-~~~~l~~~~ 177 (379)
+++++|+||||++........ .+-+.+.+.|++|+++ .+++|+|++ ....+...+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l 64 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELL 64 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHH
Confidence 478999999999852100011 2467999999999988 699999999 665555544
No 63
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.12 E-value=0.0026 Score=67.37 Aligned_cols=57 Identities=25% Similarity=0.325 Sum_probs=42.9
Q ss_pred cCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcC--CEEEEcCCChhhHHhhc
Q 017025 119 KGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYF--PTAIVTGRCRDKVFSFV 177 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~--~vaIaTGR~~~~l~~~~ 177 (379)
+...+.+++..||+++....- ...+-+.+.++|++|++.+ +++|+||.+...+..+.
T Consensus 361 ~~g~~~~~v~~~~~~~g~i~~--~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~ 419 (556)
T TIGR01525 361 SQGKTVVFVAVDGELLGVIAL--RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVA 419 (556)
T ss_pred hCCcEEEEEEECCEEEEEEEe--cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHH
Confidence 344577888899988864321 2357889999999998874 89999999887766654
No 64
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.07 E-value=0.00094 Score=59.64 Aligned_cols=50 Identities=18% Similarity=0.244 Sum_probs=35.9
Q ss_pred CcEEEEEeCCCccCCCCC------CCCccc-CCHHHHHHHHHHHhc-CCEEEEcCCCh
Q 017025 121 KKIVMFLDYDGTLAPIVE------DPDRAF-MTNEMREAVRDVARY-FPTAIVTGRCR 170 (379)
Q Consensus 121 k~~liflD~DGTLl~~~~------~pd~~~-~s~~~~~aL~~L~~~-~~vaIaTGR~~ 170 (379)
+++++++|+||||+.... +|+.-. +-+.+.++|++|.+. .+++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 457789999999997321 111111 347899999999988 69999996554
No 65
>PRK10444 UMP phosphatase; Provisional
Probab=97.01 E-value=0.00066 Score=64.61 Aligned_cols=48 Identities=15% Similarity=0.131 Sum_probs=40.3
Q ss_pred EEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhh
Q 017025 123 IVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSF 176 (379)
Q Consensus 123 ~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~ 176 (379)
++++||+||||+.. . .+.+...++|++|++. .+++++|+|+......+
T Consensus 2 ~~v~~DlDGtL~~~-----~-~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~ 50 (248)
T PRK10444 2 KNVICDIDGVLMHD-----N-VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDL 50 (248)
T ss_pred cEEEEeCCCceEeC-----C-eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHH
Confidence 47899999999983 2 5788999999999998 69999999998655543
No 66
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.85 E-value=0.0011 Score=63.81 Aligned_cols=43 Identities=21% Similarity=0.147 Sum_probs=34.9
Q ss_pred EEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChh
Q 017025 123 IVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRD 171 (379)
Q Consensus 123 ~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~ 171 (379)
++++||+||||+.. . ..-+.+.++|++|++. .+++++|+|+..
T Consensus 3 ~~~~~D~DGtl~~~-----~-~~~~ga~e~l~~L~~~g~~~~~~Tnns~~ 46 (279)
T TIGR01452 3 QGFIFDCDGVLWLG-----E-RVVPGAPELLDRLARAGKAALFVTNNSTK 46 (279)
T ss_pred cEEEEeCCCceEcC-----C-eeCcCHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 57899999999883 2 2445689999999998 599999998743
No 67
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=96.81 E-value=0.0008 Score=61.88 Aligned_cols=64 Identities=28% Similarity=0.457 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC-CCcceEEeCCH--HHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK-ETHASYSLQEP--SEVKDF 364 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~-~t~A~y~l~d~--~eV~~~ 364 (379)
.|+..++.+++.++++.+ ++++|||+.+|.++.+.+ |++|+++..+. +..|+|++.+. .++..+
T Consensus 152 ~k~~~~~~~~~~~~~~~~---~~i~iGDs~~Di~aa~~a-----g~~i~~~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPE---NTVAVGDGANDLSMIKAA-----GLGIAFNAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHH---HEEEEECCHHHHHHHHhC-----CCeEEeCCCHHHHHhchhccCCCCHHHHHhh
Confidence 489999999999999764 899999999999999998 88888864332 36888988754 455443
No 68
>PLN02645 phosphoglycolate phosphatase
Probab=96.76 E-value=0.0013 Score=64.57 Aligned_cols=65 Identities=17% Similarity=0.166 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCc-CCHHHHHHHHhcCCeE-EEEecCCC--C--------CCcceEEeCCHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDR-TDEDAFKVLRNRGQGF-GILVSKTP--K--------ETHASYSLQEPSEV 361 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~-NDe~mf~~~~~~~~G~-gVaVgna~--~--------~t~A~y~l~d~~eV 361 (379)
+-..++.+++.+|++.+ ++++|||+. +|+.+=+.+ |+ +|+|..+. . .-.++|++++..++
T Consensus 232 ~p~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~A~~a-----G~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l 303 (311)
T PLN02645 232 STFMMDYLANKFGIEKS---QICMVGDRLDTDILFGQNG-----GCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDF 303 (311)
T ss_pred hHHHHHHHHHHcCCCcc---cEEEEcCCcHHHHHHHHHc-----CCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHH
Confidence 34567888889998875 899999997 999877766 44 66774331 1 13468999999998
Q ss_pred HHHHH
Q 017025 362 KDFLR 366 (379)
Q Consensus 362 ~~~L~ 366 (379)
.++++
T Consensus 304 ~~~~~ 308 (311)
T PLN02645 304 LTLKA 308 (311)
T ss_pred HHHhh
Confidence 77665
No 69
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.69 E-value=0.0034 Score=59.41 Aligned_cols=26 Identities=19% Similarity=0.294 Sum_probs=22.9
Q ss_pred cHHHHHHhccCC-cEEEEEeCCCccCC
Q 017025 110 KFEEIVNASKGK-KIVMFLDYDGTLAP 135 (379)
Q Consensus 110 ~f~~~~~~~~~k-~~liflD~DGTLl~ 135 (379)
++++|.+..++| +..|.+|+|||++.
T Consensus 50 ~~~~~~~~~~~~~p~av~~DIDeTvld 76 (237)
T PRK11009 50 SVAQIEKSLEGRPPMAVGFDIDDTVLF 76 (237)
T ss_pred EHHHhhhhccCCCCcEEEEECcCcccc
Confidence 889999888777 55999999999996
No 70
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=96.61 E-value=0.0024 Score=57.49 Aligned_cols=46 Identities=28% Similarity=0.391 Sum_probs=40.8
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCC
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTP 346 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~ 346 (379)
+|+.+++.+++.+|++.+ ++++|||+.+|.+|++.+ |+++++...+
T Consensus 147 ~k~~~~~~~~~~~~~~~~---~~i~iGDs~~D~~~a~~a-----g~~~a~~~~~ 192 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLT---ETVAVGDSKNDLPMFEVA-----DISISLGDEG 192 (201)
T ss_pred cHHHHHHHHHHHhCCCHH---HEEEEcCCHhHHHHHHhc-----CCeEEECCCc
Confidence 699999999999998764 899999999999999998 8999986543
No 71
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.55 E-value=0.0028 Score=60.95 Aligned_cols=79 Identities=16% Similarity=0.143 Sum_probs=55.6
Q ss_pred hhhhhhhhc-CCCccccHHHHHHhccCCcEEEEEeCCCccCCCC--------CC-C------------CcccCCHHHHHH
Q 017025 95 EEQTSWIAR-HPSALSKFEEIVNASKGKKIVMFLDYDGTLAPIV--------ED-P------------DRAFMTNEMREA 152 (379)
Q Consensus 95 ~~~~~w~~~-~psal~~f~~~~~~~~~k~~liflD~DGTLl~~~--------~~-p------------d~~~~s~~~~~a 152 (379)
.||.+-..+ +-.|-..|++..+..++++.+|+||+|+|++... .+ | ....+-+.+.+.
T Consensus 47 ~Ey~al~~q~~n~A~~~~~~~~~~~~~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~ 126 (266)
T TIGR01533 47 AEYKALYLQAYNLAKMRLDNNLKKVKDKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDF 126 (266)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHH
Confidence 444444433 4566667888777667889999999999998643 11 0 023345678899
Q ss_pred HHHHHhc-CCEEEEcCCChhhH
Q 017025 153 VRDVARY-FPTAIVTGRCRDKV 173 (379)
Q Consensus 153 L~~L~~~-~~vaIaTGR~~~~l 173 (379)
|+.|.++ .+++|+|+|+....
T Consensus 127 L~~L~~~G~~v~iVTnR~~~~~ 148 (266)
T TIGR01533 127 LNYANSKGVKIFYVSNRSEKEK 148 (266)
T ss_pred HHHHHHCCCeEEEEeCCCcchH
Confidence 9999888 59999999985443
No 72
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.51 E-value=0.0021 Score=57.60 Aligned_cols=61 Identities=20% Similarity=0.146 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEE--EEecCCCC-----CCcceEEeCCHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFG--ILVSKTPK-----ETHASYSLQEPSEVK 362 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~g--VaVgna~~-----~t~A~y~l~d~~eV~ 362 (379)
+-..+...++++|++.+ ++++|||+.+|+.+=+.+ |+. |.+.-... +..|+++++++.++.
T Consensus 108 ~p~~~~~a~~~~~~~~~---~~v~VGDs~~Di~aA~~a-----G~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 108 KPGMLLQARKELHIDMA---QSYMVGDKLEDMQAGVAA-----KVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred CHHHHHHHHHHcCcChh---hEEEEcCCHHHHHHHHHC-----CCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 45667888999999875 899999999998877766 552 45543321 134889999888764
No 73
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=96.42 E-value=0.0074 Score=55.39 Aligned_cols=67 Identities=19% Similarity=0.229 Sum_probs=53.4
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCCC--C----CCcceEEeCCHHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKTP--K----ETHASYSLQEPSEVKDFL 365 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna~--~----~t~A~y~l~d~~eV~~~L 365 (379)
.|..+++.+++.++++.+ .+++|||+.+|..+.+.+ |+ +|.|..+. . ...+.|++++..++..+|
T Consensus 150 p~~~~~~~~~~~~~~~~~---~~i~igD~~~Di~~a~~~-----g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 150 PDPAPLLLACEKLGLDPE---EMLFVGDSRNDIQAARAA-----GCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLL 221 (226)
T ss_pred cChHHHHHHHHHcCCChh---heEEECCCHHHHHHHHHC-----CCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHH
Confidence 357889999999999865 899999999999999987 55 66665331 1 246889999999998887
Q ss_pred HH
Q 017025 366 RR 367 (379)
Q Consensus 366 ~~ 367 (379)
.+
T Consensus 222 ~~ 223 (226)
T PRK13222 222 GL 223 (226)
T ss_pred HH
Confidence 54
No 74
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=96.30 E-value=0.32 Score=48.83 Aligned_cols=189 Identities=17% Similarity=0.181 Sum_probs=100.3
Q ss_pred CCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhc----c----------c-----
Q 017025 120 GKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFV----K----------L----- 179 (379)
Q Consensus 120 ~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~----~----------l----- 179 (379)
++-+|+-||=|+||.....+ -..+..+...|-+|-+. ..|+|+|.=.+....++. | +
T Consensus 145 ~~L~LvTFDgDvTLY~DG~s---l~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY~~RL~GLL~a~~~~~~Lt~~qk 221 (408)
T PF06437_consen 145 YGLKLVTFDGDVTLYEDGAS---LEPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKYEERLHGLLDAFKDSTDLTPEQK 221 (408)
T ss_pred CCceEEEEcCCcccccCCCC---CCCCchHHHHHHHHHhcCCeEEEEeCCCCCChHHHHHHHHHHHHHHHhccCCCHHHh
Confidence 37799999999999994322 12356677777777776 699999988876544331 1 1
Q ss_pred cCceEEecCCceE--ecCCC--ccccccCCCccccCCCccch-hHHHHHHHHH----HHHhc--cCCCcEEEeccceEEE
Q 017025 180 AGLYYAGSHGMDI--EGPSK--KRRYKKGNHGVLCQPASEFL-PMINEVYQTL----LEKTK--SIPGAKVENNKFCLSV 248 (379)
Q Consensus 180 ~~l~li~~nGa~I--~~~~~--~~~~~~~~e~~~~~~~~~~~-~~i~ev~~~l----~~~~~--~~~g~~iE~~~~~l~~ 248 (379)
..+++.|.---+. +.+.+ ...+....+|.+.. -..|. +.|.++++.. ....+ ..| +.+-.++.++.+
T Consensus 222 ~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~~-m~~W~~~dI~~lLD~AE~~L~~~~~~l~Lp-a~IiRK~RAVGi 299 (408)
T PF06437_consen 222 SNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLPE-MKTWSEEDITELLDIAEAALRDCVKRLNLP-ATIIRKERAVGI 299 (408)
T ss_pred cCEEEecccceeEEEecCCCCCCeEEccHHhccCcc-ccCcCHHHHHHHHHHHHHHHHHHHHHcCCC-eeEEeecceeeE
Confidence 1233333211111 23321 11111223454321 12342 2344444432 22222 344 455555555544
Q ss_pred eecc---CCcchHHHHHHHHHHHHhhCC---Cc--EEEeCC--eEEEEEcCCCCCHHHHHHHHHHHh----CCCCCCCcc
Q 017025 249 HFRC---VDENSWGTLAEQVRVVLDKYP---KL--TLTQGR--MVLEIRPTIKWDKGKALEFLLEAL----GYANSKDVV 314 (379)
Q Consensus 249 ~~r~---vd~~~~~~l~e~v~~vl~~~p---~l--~v~~g~--~~lEI~P~~g~sKG~Al~~Lle~l----g~~~~~~~~ 314 (379)
-... ...+.++++.-.++..++..+ .+ ....|+ -++|| | ||.-||+.|.+.+ ++..+ +
T Consensus 300 vP~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----G-dKs~GV~~lQ~y~~~~~~i~~~---~ 371 (408)
T PF06437_consen 300 VPKPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----G-DKSLGVRALQKYFDPEGGIKPS---E 371 (408)
T ss_pred ecCCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----C-CcHHhHHHHHHHHHhccCCCcc---c
Confidence 3321 011233344334555555432 12 223442 35554 5 8999999999999 88876 8
Q ss_pred EEEEcCC
Q 017025 315 PVYIGDD 321 (379)
Q Consensus 315 vi~~GD~ 321 (379)
++-+||-
T Consensus 372 tLHVGDQ 378 (408)
T PF06437_consen 372 TLHVGDQ 378 (408)
T ss_pred eeeehhh
Confidence 9999995
No 75
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=96.29 E-value=0.0026 Score=56.12 Aligned_cols=40 Identities=30% Similarity=0.306 Sum_probs=35.1
Q ss_pred EcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHH
Q 017025 287 RPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKV 330 (379)
Q Consensus 287 ~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~ 330 (379)
.+. +.+|+.+++.+++.+|++.+ .+++|||+.||.+|++.
T Consensus 137 ~~~-~~~K~~~l~~~~~~~~~~~~---~~~~iGDs~~D~~~~~~ 176 (177)
T TIGR01488 137 NPE-GECKGKVLKELLEESKITLK---KIIAVGDSVNDLPMLKL 176 (177)
T ss_pred cCC-cchHHHHHHHHHHHhCCCHH---HEEEEeCCHHHHHHHhc
Confidence 355 78999999999999988764 89999999999999985
No 76
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=96.20 E-value=0.0052 Score=55.63 Aligned_cols=46 Identities=22% Similarity=0.131 Sum_probs=40.0
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecC
Q 017025 291 KWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSK 344 (379)
Q Consensus 291 g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgn 344 (379)
+-.|..+++.+++..+++.+ .++++||+.+|.+|++.+ |.+++|..
T Consensus 153 g~~K~~~l~~~~~~~~~~~~---~~~~~gDs~~D~~~~~~a-----~~~~~v~~ 198 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLK---DSYAYGDSISDLPLLSLV-----GHPYVVNP 198 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHH---HcEeeeCCcccHHHHHhC-----CCcEEeCC
Confidence 55788889999999998764 799999999999999998 78887764
No 77
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=96.13 E-value=0.019 Score=61.00 Aligned_cols=67 Identities=24% Similarity=0.318 Sum_probs=50.9
Q ss_pred EEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEe--CCHHH
Q 017025 285 EIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSL--QEPSE 360 (379)
Q Consensus 285 EI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l--~d~~e 360 (379)
++.|. +|...++.+.+. . ..++++||+.||.+|++.+ |.||+|+++.. +..|++++ ++..+
T Consensus 449 ~~~p~---~K~~~v~~l~~~----~---~~v~~VGDg~nD~~al~~A-----~vgia~g~g~~~a~~~Advvl~~~~l~~ 513 (562)
T TIGR01511 449 EVLPD---DKAALIKELQEK----G---RVVAMVGDGINDAPALAQA-----DVGIAIGAGTDVAIEAADVVLMRNDLND 513 (562)
T ss_pred cCChH---HHHHHHHHHHHc----C---CEEEEEeCCCccHHHHhhC-----CEEEEeCCcCHHHHhhCCEEEeCCCHHH
Confidence 44555 788888887762 2 2799999999999999998 89999998653 36789988 46776
Q ss_pred HHHHHH
Q 017025 361 VKDFLR 366 (379)
Q Consensus 361 V~~~L~ 366 (379)
+.++++
T Consensus 514 l~~~i~ 519 (562)
T TIGR01511 514 VATAID 519 (562)
T ss_pred HHHHHH
Confidence 666543
No 78
>PLN02954 phosphoserine phosphatase
Probab=96.03 E-value=0.013 Score=54.01 Aligned_cols=67 Identities=24% Similarity=0.293 Sum_probs=48.3
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCC-C---CCcceEEeCCHHHHHHHH
Q 017025 291 KWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTP-K---ETHASYSLQEPSEVKDFL 365 (379)
Q Consensus 291 g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~-~---~t~A~y~l~d~~eV~~~L 365 (379)
+-.|..+++.+++.+|.+ ++++|||+.||+.|.+.. +..+.++.+... . +..|+|++.++.++.++|
T Consensus 153 ~~~K~~~i~~~~~~~~~~-----~~i~iGDs~~Di~aa~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 153 SGGKAEAVQHIKKKHGYK-----TMVMIGDGATDLEARKPG---GADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred CccHHHHHHHHHHHcCCC-----ceEEEeCCHHHHHhhhcC---CCCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence 346999999999998863 699999999999995553 113344444322 1 245899999999988765
No 79
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.03 E-value=0.018 Score=51.49 Aligned_cols=54 Identities=17% Similarity=0.097 Sum_probs=42.5
Q ss_pred CCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCC-hhhHHhhc
Q 017025 120 GKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRC-RDKVFSFV 177 (379)
Q Consensus 120 ~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~-~~~l~~~~ 177 (379)
...+++++|+||||+.. +...+.+.+.++|++|++. ..++|+|+.+ ...+..+.
T Consensus 23 ~~v~~vv~D~Dgtl~~~----~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~ 78 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYP----DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVE 78 (170)
T ss_pred CCCCEEEEecCCccccC----CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHH
Confidence 34578999999999984 2346788999999999998 6999999998 44444443
No 80
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.02 E-value=0.016 Score=56.04 Aligned_cols=59 Identities=22% Similarity=0.147 Sum_probs=46.0
Q ss_pred CCcEEEEEeCCCccCCCCCC----CC---cccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc
Q 017025 120 GKKIVMFLDYDGTLAPIVED----PD---RAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 120 ~k~~liflD~DGTLl~~~~~----pd---~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~ 178 (379)
++.+++++|+||||...... +. ...+.+.+.++|++|.+. ..++|+|||+.......+.
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~ 222 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVE 222 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHH
Confidence 34678999999999985431 11 235788999999999998 5999999999987766553
No 81
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=96.02 E-value=0.0075 Score=54.74 Aligned_cols=52 Identities=13% Similarity=0.205 Sum_probs=40.0
Q ss_pred cEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceE-EeCCHHHHHHHHHHHHH
Q 017025 314 VPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASY-SLQEPSEVKDFLRRLVQ 370 (379)
Q Consensus 314 ~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y-~l~d~~eV~~~L~~Lv~ 370 (379)
.+++|||+.||.+|.+.+ |.||.++.... +..+.+ .++++.++.++|.++..
T Consensus 146 ~~v~iGDs~~D~~~~~aa-----~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 146 RVIAAGDSYNDTTMLGEA-----DAGILFRPPANVIAEFPQFPAVHTYDELLAAIDKASA 200 (205)
T ss_pred eEEEEeCCHHHHHHHHhC-----CCCEEECCCHHHHHhCCcccccCCHHHHHHHHHHHHh
Confidence 799999999999999987 67777654321 234454 78999999999888654
No 82
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.96 E-value=0.012 Score=51.32 Aligned_cols=58 Identities=19% Similarity=0.192 Sum_probs=43.5
Q ss_pred CcEEEEEeCCCccCCCCCC--CCc-------------------ccCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhcc
Q 017025 121 KKIVMFLDYDGTLAPIVED--PDR-------------------AFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 121 k~~liflD~DGTLl~~~~~--pd~-------------------~~~s~~~~~aL~~L~~~~~vaIaTGR~~~~l~~~~~ 178 (379)
++.++++|+||||+..... ++. ..+-|.+.+.|..|++.++++|+|+.+...+...++
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~ 79 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLD 79 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHH
Confidence 4678999999999986321 110 023467899999998668999999999998887654
No 83
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=95.96 E-value=0.0098 Score=52.47 Aligned_cols=58 Identities=22% Similarity=0.221 Sum_probs=40.4
Q ss_pred CcEEEEEeCCCccCCC----CCC-CCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc
Q 017025 121 KKIVMFLDYDGTLAPI----VED-PDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 121 k~~liflD~DGTLl~~----~~~-pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~ 178 (379)
+-++++||+||||++- ..+ ..-+...-.--..|+-|.+. ..++|+|||.-.-+....+
T Consensus 7 ~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~vAIITGr~s~ive~Ra~ 70 (170)
T COG1778 7 NIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIKVAIITGRDSPIVEKRAK 70 (170)
T ss_pred hceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCeEEEEeCCCCHHHHHHHH
Confidence 4589999999999971 000 01112222334678999998 6999999999998887653
No 84
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=95.91 E-value=0.011 Score=62.35 Aligned_cols=67 Identities=24% Similarity=0.283 Sum_probs=50.7
Q ss_pred EEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEec-CCCC--CCcceEEe--CCHH
Q 017025 285 EIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVS-KTPK--ETHASYSL--QEPS 359 (379)
Q Consensus 285 EI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVg-na~~--~t~A~y~l--~d~~ 359 (379)
++.|. +|...++.+.+.. ..++++||+.||.+|++.+ |.||+++ ++.. +..|++++ ++..
T Consensus 408 ~~~p~---~K~~~i~~l~~~~-------~~v~~vGDg~nD~~al~~A-----~vgia~g~~~~~~~~~~ad~vl~~~~l~ 472 (536)
T TIGR01512 408 ELLPE---DKLEIVKELREKY-------GPVAMVGDGINDAPALAAA-----DVGIAMGASGSDVAIETADVVLLNDDLS 472 (536)
T ss_pred ccCcH---HHHHHHHHHHhcC-------CEEEEEeCCHHHHHHHHhC-----CEEEEeCCCccHHHHHhCCEEEECCCHH
Confidence 44454 6888777776542 2799999999999999998 8999999 5432 36789988 6888
Q ss_pred HHHHHHH
Q 017025 360 EVKDFLR 366 (379)
Q Consensus 360 eV~~~L~ 366 (379)
++.+++.
T Consensus 473 ~l~~~i~ 479 (536)
T TIGR01512 473 RLPQAIR 479 (536)
T ss_pred HHHHHHH
Confidence 8766543
No 85
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.78 E-value=0.0095 Score=51.72 Aligned_cols=47 Identities=19% Similarity=0.244 Sum_probs=34.8
Q ss_pred EEEEeCCCccCCCCCC-----CCcccCCHHHHHHHHHHHhc-CCEEEEcCCCh
Q 017025 124 VMFLDYDGTLAPIVED-----PDRAFMTNEMREAVRDVARY-FPTAIVTGRCR 170 (379)
Q Consensus 124 liflD~DGTLl~~~~~-----pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~ 170 (379)
+++||+||||...... ++...+-+.+.++|+.|+++ ..++|+|..+.
T Consensus 2 ~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~ 54 (147)
T TIGR01656 2 ALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSG 54 (147)
T ss_pred eEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCc
Confidence 5899999999985320 01123567889999999988 68899988743
No 86
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=95.75 E-value=0.025 Score=54.57 Aligned_cols=71 Identities=21% Similarity=0.398 Sum_probs=55.0
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCC--CC----CCcceEEeCCHHHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKT--PK----ETHASYSLQEPSEVKDFLR 366 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna--~~----~t~A~y~l~d~~eV~~~L~ 366 (379)
.|..++..++++++++.+ ++++|||+.+|+.+-+.+. -.+|.+..+ .. ...|+|++.++.++.+++.
T Consensus 196 ~k~~~~~~~l~~~~~~p~---~~l~IGDs~~Di~aA~~AG----~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~ 268 (273)
T PRK13225 196 SKRRALSQLVAREGWQPA---AVMYVGDETRDVEAARQVG----LIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVT 268 (273)
T ss_pred CCHHHHHHHHHHhCcChh---HEEEECCCHHHHHHHHHCC----CeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHH
Confidence 467889999999998864 8999999999988877761 235555443 22 2468999999999999988
Q ss_pred HHHH
Q 017025 367 RLVQ 370 (379)
Q Consensus 367 ~Lv~ 370 (379)
.|+.
T Consensus 269 ~~~~ 272 (273)
T PRK13225 269 QLMR 272 (273)
T ss_pred HHhc
Confidence 8764
No 87
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=95.72 E-value=0.012 Score=55.26 Aligned_cols=46 Identities=20% Similarity=0.176 Sum_probs=37.2
Q ss_pred EEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEc---CCChhhHHhh
Q 017025 125 MFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVT---GRCRDKVFSF 176 (379)
Q Consensus 125 iflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaT---GR~~~~l~~~ 176 (379)
++||+||||+.. . .+-+.+.++|+.++++ .++.++| ||+...+.+.
T Consensus 1 ~lfD~DGvL~~~-----~-~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~ 50 (236)
T TIGR01460 1 FLFDIDGVLWLG-----H-KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEK 50 (236)
T ss_pred CEEeCcCccCcC-----C-ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHH
Confidence 478999999983 2 3455889999999998 6899998 9999876654
No 88
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=95.71 E-value=0.015 Score=65.20 Aligned_cols=65 Identities=20% Similarity=0.335 Sum_probs=47.8
Q ss_pred EEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEeCC--HHH
Q 017025 285 EIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSLQE--PSE 360 (379)
Q Consensus 285 EI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l~d--~~e 360 (379)
.+.|. +|...++.+. ..| +.+.++||+.||.+|++.+ +.||+|+++.. +..|+|++.+ ...
T Consensus 613 r~~P~---~K~~iV~~lq-~~g------~~va~iGDG~ND~~alk~A-----dVGia~g~g~~~ak~aAD~vl~dd~f~~ 677 (917)
T TIGR01116 613 RVEPS---HKSELVELLQ-EQG------EIVAMTGDGVNDAPALKKA-----DIGIAMGSGTEVAKEASDMVLADDNFAT 677 (917)
T ss_pred ecCHH---HHHHHHHHHH-hcC------CeEEEecCCcchHHHHHhC-----CeeEECCCCcHHHHHhcCeEEccCCHHH
Confidence 34455 6877777554 332 2577899999999999998 89999998753 3689999976 555
Q ss_pred HHHH
Q 017025 361 VKDF 364 (379)
Q Consensus 361 V~~~ 364 (379)
+.+.
T Consensus 678 i~~~ 681 (917)
T TIGR01116 678 IVAA 681 (917)
T ss_pred HHHH
Confidence 5544
No 89
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=95.69 E-value=0.021 Score=51.91 Aligned_cols=66 Identities=17% Similarity=0.190 Sum_probs=50.6
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCC--C----CCCcceEEeCCHHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKT--P----KETHASYSLQEPSEVKDFL 365 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna--~----~~t~A~y~l~d~~eV~~~L 365 (379)
-|...++.+++.+|++.+ ++++|||+.+|+.+-+.+ |+ .|.+..+ . .+..|+|+++++.++..++
T Consensus 132 P~~~~~~~~~~~~~~~~~---~~l~igD~~~Di~aA~~~-----Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 132 PAPDIVREALRLLDVPPE---DAVMVGDAVTDLASARAA-----GTATVAALWGEGDAGELLAARPDFLLRKPQSLLALC 203 (205)
T ss_pred CChHHHHHHHHHcCCChh---heEEEcCCHHHHHHHHHc-----CCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHh
Confidence 467888999999999875 899999999999887776 54 3333322 2 1357899999999998876
Q ss_pred H
Q 017025 366 R 366 (379)
Q Consensus 366 ~ 366 (379)
+
T Consensus 204 ~ 204 (205)
T TIGR01454 204 R 204 (205)
T ss_pred h
Confidence 5
No 90
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.66 E-value=0.0095 Score=52.95 Aligned_cols=35 Identities=31% Similarity=0.192 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
|-..++.+++.++++.+ ++++|||+.+|.++-+.+
T Consensus 105 ~~~~~~~~~~~~~~~~~---e~l~IGD~~~Di~~A~~a 139 (161)
T TIGR01261 105 KIKLLEPYLKKNLIDKA---RSYVIGDRETDMQLAENL 139 (161)
T ss_pred CHHHHHHHHHHcCCCHH---HeEEEeCCHHHHHHHHHC
Confidence 45678888888988764 899999999999987776
No 91
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=95.59 E-value=0.0087 Score=53.13 Aligned_cols=44 Identities=36% Similarity=0.559 Sum_probs=30.1
Q ss_pred EEEEEeCCCccCCCC------CCCCc-ccCCHHHHHHHHHHHhcC-CEEEEc
Q 017025 123 IVMFLDYDGTLAPIV------EDPDR-AFMTNEMREAVRDVARYF-PTAIVT 166 (379)
Q Consensus 123 ~liflD~DGTLl~~~------~~pd~-~~~s~~~~~aL~~L~~~~-~vaIaT 166 (379)
++.+||+||||.... .+|+. ..+.+.+.++|++|.+.+ .++|+|
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvT 52 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVT 52 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEe
Confidence 368999999998632 12443 345668999999998884 677776
No 92
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=95.57 E-value=0.014 Score=63.08 Aligned_cols=67 Identities=16% Similarity=0.216 Sum_probs=52.0
Q ss_pred EEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEeC--CHH
Q 017025 284 LEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSLQ--EPS 359 (379)
Q Consensus 284 lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l~--d~~ 359 (379)
-++.|. +|...++.+.+.- ..+.++||+.||.++++.+ ++||+|+++.. +..|++++- ++.
T Consensus 490 a~~~Pe---dK~~~v~~lq~~g-------~~VamvGDG~NDapAL~~A-----dvGiAm~~gt~~akeaadivLldd~~s 554 (675)
T TIGR01497 490 AEATPE---DKIALIRQEQAEG-------KLVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAANMVDLDSDPT 554 (675)
T ss_pred cCCCHH---HHHHHHHHHHHcC-------CeEEEECCCcchHHHHHhC-----CEeEEeCCCCHHHHHhCCEEECCCCHH
Confidence 345666 7999999987642 1599999999999999998 89999998763 478898874 566
Q ss_pred HHHHHH
Q 017025 360 EVKDFL 365 (379)
Q Consensus 360 eV~~~L 365 (379)
.+.+.+
T Consensus 555 ~Iv~av 560 (675)
T TIGR01497 555 KLIEVV 560 (675)
T ss_pred HHHHHH
Confidence 555543
No 93
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.56 E-value=0.066 Score=50.15 Aligned_cols=46 Identities=30% Similarity=0.403 Sum_probs=37.1
Q ss_pred CCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEe
Q 017025 292 WDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILV 342 (379)
Q Consensus 292 ~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaV 342 (379)
--|.+.++.+|+.-+++- .++|+|||.+|.+||+.++.+| |++|+-
T Consensus 190 g~ka~i~e~~~ele~~d~----sa~~VGDSItDv~ml~~~rgrG-glAvaF 235 (315)
T COG4030 190 GEKAKIMEGYCELEGIDF----SAVVVGDSITDVKMLEAARGRG-GLAVAF 235 (315)
T ss_pred cchhHHHHHHHhhcCCCc----ceeEecCcccchHHHHHhhccC-ceEEEe
Confidence 357788888888877664 4899999999999999998765 566653
No 94
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=95.49 E-value=0.022 Score=51.78 Aligned_cols=63 Identities=24% Similarity=0.290 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEec--CCCC----CCcceEEeCCHHHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVS--KTPK----ETHASYSLQEPSEVKDF 364 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVg--na~~----~t~A~y~l~d~~eV~~~ 364 (379)
+...+..+++.+|++.+ ++++|||+.+|+.+-+.+ |+ .|.+. .... ...|+|+++++.++..+
T Consensus 143 ~p~~~~~~~~~~~~~~~---~~~~igDs~~d~~aa~~a-----G~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 143 HPDPLLLAAERLGVAPQ---QMVYVGDSRVDIQAARAA-----GCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred ChHHHHHHHHHcCCChh---HeEEeCCCHHHHHHHHHC-----CCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 46789999999999875 799999999999999887 54 44453 2211 24688999999988764
No 95
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=95.47 E-value=0.052 Score=49.71 Aligned_cols=67 Identities=21% Similarity=0.181 Sum_probs=52.4
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCCC--C----CCcceEEeCCHHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKTP--K----ETHASYSLQEPSEVKDFL 365 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna~--~----~t~A~y~l~d~~eV~~~L 365 (379)
-|...++.+++++|++.+ ++++|||+.+|+.+-+.+ |+ .|.+..+. . +..++|.+++..++.+++
T Consensus 139 p~p~~~~~~~~~~~~~~~---~~~~iGDs~~Di~aa~~a-----G~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i 210 (214)
T PRK13288 139 PDPEPVLKALELLGAKPE---EALMVGDNHHDILAGKNA-----GTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIV 210 (214)
T ss_pred CCcHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHH
Confidence 567899999999998764 899999999999988887 44 45554432 1 235889999999998877
Q ss_pred HH
Q 017025 366 RR 367 (379)
Q Consensus 366 ~~ 367 (379)
.+
T Consensus 211 ~~ 212 (214)
T PRK13288 211 GD 212 (214)
T ss_pred hh
Confidence 64
No 96
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=95.46 E-value=0.024 Score=52.23 Aligned_cols=65 Identities=17% Similarity=0.203 Sum_probs=46.8
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC-CCcce-E-EeCCHHHHHHHHHH
Q 017025 291 KWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK-ETHAS-Y-SLQEPSEVKDFLRR 367 (379)
Q Consensus 291 g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~-~t~A~-y-~l~d~~eV~~~L~~ 367 (379)
+..|...++.+ +..|. .++++||+.||++|++.+ |++|++.-.+. ...|+ + .+.+.+|+.+.|..
T Consensus 130 ~~~K~~~l~~l-~~~~~------~~v~vGDs~nDl~ml~~A-----g~~ia~~ak~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (203)
T TIGR02137 130 KDPKRQSVIAF-KSLYY------RVIAAGDSYNDTTMLSEA-----HAGILFHAPENVIREFPQFPAVHTYEDLKREFLK 197 (203)
T ss_pred cchHHHHHHHH-HhhCC------CEEEEeCCHHHHHHHHhC-----CCCEEecCCHHHHHhCCCCCcccCHHHHHHHHHH
Confidence 34799999988 45542 599999999999999998 89999886542 23332 2 24577777766654
No 97
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=95.45 E-value=0.024 Score=54.50 Aligned_cols=68 Identities=22% Similarity=0.254 Sum_probs=52.9
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCC--CC----CCcceEEeCCHHHHHH
Q 017025 291 KWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKT--PK----ETHASYSLQEPSEVKD 363 (379)
Q Consensus 291 g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna--~~----~t~A~y~l~d~~eV~~ 363 (379)
+-.+...++.+++.+|+..+ ++++|||+.+|+.+-+.+ |+ ++.|..+ .. +..++|+++++.++.+
T Consensus 156 ~Kp~p~~~~~~~~~~g~~~~---~~l~IGD~~~Di~aA~~a-----Gi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~ 227 (272)
T PRK13223 156 KKPDPAALLFVMKMAGVPPS---QSLFVGDSRSDVLAAKAA-----GVQCVALSYGYNHGRPIAEESPALVIDDLRALLP 227 (272)
T ss_pred CCCCcHHHHHHHHHhCCChh---HEEEECCCHHHHHHHHHC-----CCeEEEEecCCCCchhhhhcCCCEEECCHHHHHH
Confidence 34577899999999999875 899999999999998887 54 5555443 21 2478999999999887
Q ss_pred HHH
Q 017025 364 FLR 366 (379)
Q Consensus 364 ~L~ 366 (379)
+|.
T Consensus 228 ~~~ 230 (272)
T PRK13223 228 GCA 230 (272)
T ss_pred HHh
Confidence 655
No 98
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.44 E-value=0.014 Score=47.68 Aligned_cols=40 Identities=20% Similarity=0.199 Sum_probs=31.4
Q ss_pred EEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCCh
Q 017025 125 MFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCR 170 (379)
Q Consensus 125 iflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~ 170 (379)
++||+||||..- ...-|...++|++|++. .+++++|-.+.
T Consensus 1 ~l~D~dGvl~~g------~~~ipga~e~l~~L~~~g~~~~~lTNns~ 41 (101)
T PF13344_consen 1 FLFDLDGVLYNG------NEPIPGAVEALDALRERGKPVVFLTNNSS 41 (101)
T ss_dssp EEEESTTTSEET------TEE-TTHHHHHHHHHHTTSEEEEEES-SS
T ss_pred CEEeCccEeEeC------CCcCcCHHHHHHHHHHcCCCEEEEeCCCC
Confidence 689999999982 34567889999999999 58999975554
No 99
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=95.43 E-value=0.027 Score=59.32 Aligned_cols=74 Identities=19% Similarity=0.296 Sum_probs=48.6
Q ss_pred hhhhhhcCCCccccHHHHH--H--hccCCcEEEEEeCCCccCCCCC------CCCccc-CCHHHHHHHHHHHhc-CCEEE
Q 017025 97 QTSWIARHPSALSKFEEIV--N--ASKGKKIVMFLDYDGTLAPIVE------DPDRAF-MTNEMREAVRDVARY-FPTAI 164 (379)
Q Consensus 97 ~~~w~~~~psal~~f~~~~--~--~~~~k~~liflD~DGTLl~~~~------~pd~~~-~s~~~~~aL~~L~~~-~~vaI 164 (379)
...|....+..-..|+.++ . ..+++.+++|||+||||..... +|+.-. +-+.+.++|++|.+. +.++|
T Consensus 139 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvI 218 (526)
T TIGR01663 139 PEKRDRKGNPGWENLEKLLIFTAAGVKGQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICI 218 (526)
T ss_pred hhhhcccCCccccccCceEEEecCCcCccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEE
Confidence 3467755443333333311 1 1267789999999999996321 222222 468899999999999 69999
Q ss_pred EcCCCh
Q 017025 165 VTGRCR 170 (379)
Q Consensus 165 aTGR~~ 170 (379)
+|..+.
T Consensus 219 vTNQ~g 224 (526)
T TIGR01663 219 FTNQGG 224 (526)
T ss_pred EECCcc
Confidence 997554
No 100
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=95.38 E-value=0.033 Score=51.90 Aligned_cols=65 Identities=22% Similarity=0.201 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCCC---C----CCcceEEeCCHHHHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKTP---K----ETHASYSLQEPSEVKDFL 365 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna~---~----~t~A~y~l~d~~eV~~~L 365 (379)
+...+..+++.+|++.+ ++++|||+.+|+.+-+.+ |+ .|.+.-+. . ...++|+++++.++.+.|
T Consensus 153 ~p~~~~~~~~~l~~~p~---~~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 153 HPLPLLVAAERIGVAPT---DCVYVGDDERDILAARAA-----GMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPA 224 (229)
T ss_pred CHHHHHHHHHHhCCChh---hEEEeCCCHHHHHHHHHC-----CCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHh
Confidence 45679999999999875 899999999999998887 54 44443221 1 135899999999987765
Q ss_pred H
Q 017025 366 R 366 (379)
Q Consensus 366 ~ 366 (379)
.
T Consensus 225 ~ 225 (229)
T PRK13226 225 T 225 (229)
T ss_pred c
Confidence 3
No 101
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=95.34 E-value=0.034 Score=49.91 Aligned_cols=44 Identities=27% Similarity=0.394 Sum_probs=34.8
Q ss_pred cCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-C--EEEEc
Q 017025 119 KGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYF-P--TAIVT 166 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~-~--vaIaT 166 (379)
+..-+.++||.|.||++ |....++++..+.++++++.+ . ++|+|
T Consensus 38 ~~Gik~li~DkDNTL~~----~~~~~i~~~~~~~~~~l~~~~~~~~v~IvS 84 (168)
T PF09419_consen 38 KKGIKALIFDKDNTLTP----PYEDEIPPEYAEWLNELKKQFGKDRVLIVS 84 (168)
T ss_pred hcCceEEEEcCCCCCCC----CCcCcCCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 44568899999999998 456789999999999999774 2 55544
No 102
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=95.31 E-value=0.1 Score=59.59 Aligned_cols=62 Identities=15% Similarity=0.300 Sum_probs=46.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCC---CCCcceEEeCCH
Q 017025 283 VLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTP---KETHASYSLQEP 358 (379)
Q Consensus 283 ~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~---~~t~A~y~l~d~ 358 (379)
+-.+.|. .|+.-++.+.+..|. -+.++||+.||.+|++.+ -.||.+.... .+.+|+|++.+-
T Consensus 748 ~aR~sP~---qK~~IV~~lk~~~~~------~vl~iGDG~ND~~mlk~A-----dVGIgi~g~eg~qA~~aaD~~i~~F 812 (1057)
T TIGR01652 748 CCRVSPS---QKADVVRLVKKSTGK------TTLAIGDGANDVSMIQEA-----DVGVGISGKEGMQAVMASDFAIGQF 812 (1057)
T ss_pred EeCCCHH---HHHHHHHHHHhcCCC------eEEEEeCCCccHHHHhhc-----CeeeEecChHHHHHHHhhhhhhhhH
Confidence 3456677 799999988776442 699999999999999998 3666554322 235789988763
No 103
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.02 E-value=0.028 Score=56.36 Aligned_cols=48 Identities=21% Similarity=0.349 Sum_probs=39.2
Q ss_pred CcEEEEEeCCCccCCCC------CCCCcccCCHHHHHHHHHHHhc-CCEEEEcCC
Q 017025 121 KKIVMFLDYDGTLAPIV------EDPDRAFMTNEMREAVRDVARY-FPTAIVTGR 168 (379)
Q Consensus 121 k~~liflD~DGTLl~~~------~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR 168 (379)
+++++|+|.||||.... +.++...+-|.+.++|.+|+++ .+++|+|..
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 46789999999999842 2234567888999999999988 699999985
No 104
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=94.97 E-value=0.034 Score=49.33 Aligned_cols=51 Identities=20% Similarity=0.185 Sum_probs=37.9
Q ss_pred EEEEeCCCccCCCCC------CCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHH
Q 017025 124 VMFLDYDGTLAPIVE------DPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVF 174 (379)
Q Consensus 124 liflD~DGTLl~~~~------~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~ 174 (379)
+|++|+||||+.... --......+.+.+.+++++++ ..++-+|+|+.....
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~ 58 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQAN 58 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHH
Confidence 489999999998521 001224667888999999999 589999999986544
No 105
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.92 E-value=0.039 Score=51.98 Aligned_cols=54 Identities=17% Similarity=0.153 Sum_probs=41.9
Q ss_pred cCCcEEEEEeCCCccCCCCC------------C---------CCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhh
Q 017025 119 KGKKIVMFLDYDGTLAPIVE------------D---------PDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDK 172 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~~------------~---------pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~ 172 (379)
..++-+++||+|.|++.... + ...+..-+.++++++.|++. +.++++|||+...
T Consensus 74 ~dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 74 GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 45778899999999997320 0 11455667899999999998 6999999999755
No 106
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=94.90 E-value=0.032 Score=51.61 Aligned_cols=68 Identities=19% Similarity=0.095 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCC----CCCCcceEEeCCHHHHHHHHHH
Q 017025 292 WDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKT----PKETHASYSLQEPSEVKDFLRR 367 (379)
Q Consensus 292 ~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna----~~~t~A~y~l~d~~eV~~~L~~ 367 (379)
..|..+++. ++.... .+++|||+.+|+.|.+.+ |+.++=+.- .....+.+...+-.+|.+.|+.
T Consensus 147 ~~K~~~l~~----~~~~~~---~~i~iGDs~~Di~aa~~A-----g~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~l~~ 214 (219)
T PRK09552 147 CCKPSLIRK----LSDTND---FHIVIGDSITDLEAAKQA-----DKVFARDFLITKCEELGIPYTPFETFHDVQTELKH 214 (219)
T ss_pred CchHHHHHH----hccCCC---CEEEEeCCHHHHHHHHHC-----CcceeHHHHHHHHHHcCCCccccCCHHHHHHHHHH
Confidence 458876654 455543 799999999999998876 665441110 0224566667899999999988
Q ss_pred HHHh
Q 017025 368 LVQW 371 (379)
Q Consensus 368 Lv~~ 371 (379)
+.+.
T Consensus 215 ~~~~ 218 (219)
T PRK09552 215 LLEV 218 (219)
T ss_pred Hhcc
Confidence 7653
No 107
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=94.87 E-value=0.072 Score=49.38 Aligned_cols=68 Identities=22% Similarity=0.248 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCC----CCCcceEEeCCHHHHHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTP----KETHASYSLQEPSEVKDFLR 366 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~----~~t~A~y~l~d~~eV~~~L~ 366 (379)
.-..+..+++.+|.+. ++++++||+.+|+.|-+.+.- ...+|..|..+ ....+++++.++.++..+|.
T Consensus 147 ~P~~l~~~~~~~~~~~---~~~l~VGDs~~Di~aA~~Ag~--~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 147 DPEPLLLLLEKLGLDP---EEALMVGDSLNDILAAKAAGV--PAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred CHHHHHHHHHHhCCCh---hheEEECCCHHHHHHHHHcCC--CEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 4567889999999984 379999999999999888720 12455555432 12569999999999988775
No 108
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=94.86 E-value=0.038 Score=47.46 Aligned_cols=63 Identities=25% Similarity=0.318 Sum_probs=45.9
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecC---CCCC--CcceEEeCCHHHHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSK---TPKE--THASYSLQEPSEVKDFLRR 367 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgn---a~~~--t~A~y~l~d~~eV~~~L~~ 367 (379)
.|..-++.|-+ +. ..++++||+.||+.|++.+ .+||++=. ++.+ ..|++++.++.++.+.+..
T Consensus 81 ~K~~ii~eLkk----~~---~k~vmVGnGaND~laLr~A-----DlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~ 148 (152)
T COG4087 81 MKAKIIRELKK----RY---EKVVMVGNGANDILALREA-----DLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKD 148 (152)
T ss_pred HHHHHHHHhcC----CC---cEEEEecCCcchHHHhhhc-----ccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhc
Confidence 46555554443 32 3899999999999999998 57776543 3333 5889999999999887764
No 109
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.79 E-value=0.04 Score=51.81 Aligned_cols=45 Identities=16% Similarity=0.110 Sum_probs=36.6
Q ss_pred cEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhh
Q 017025 122 KIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDK 172 (379)
Q Consensus 122 ~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~ 172 (379)
..+++||+||||... ..+-|.+.++|++|+++ .+++|+|..++..
T Consensus 8 ~~~~~~D~dG~l~~~------~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~ 53 (242)
T TIGR01459 8 YDVFLLDLWGVIIDG------NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNI 53 (242)
T ss_pred CCEEEEecccccccC------CccCccHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 357899999999973 24678999999999998 5899998766643
No 110
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=94.75 E-value=0.25 Score=56.48 Aligned_cols=66 Identities=26% Similarity=0.335 Sum_probs=50.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCCCCcceEEeCC--HHH
Q 017025 283 VLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPKETHASYSLQE--PSE 360 (379)
Q Consensus 283 ~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~~t~A~y~l~d--~~e 360 (379)
+--+.|. .|..-++.|.+ .|. .+..+||+.||.+|++.+ -.||+|+++....+|++++.+ ...
T Consensus 782 fAR~sP~---qK~~iV~~lq~-~g~------~V~m~GDG~ND~~ALK~A-----dVGIam~~~das~AA~f~l~~~~~~~ 846 (1054)
T TIGR01657 782 FARMAPD---QKETLVELLQK-LDY------TVGMCGDGANDCGALKQA-----DVGISLSEAEASVAAPFTSKLASISC 846 (1054)
T ss_pred EEecCHH---HHHHHHHHHHh-CCC------eEEEEeCChHHHHHHHhc-----CcceeeccccceeecccccCCCcHHH
Confidence 4457788 79999988775 342 689999999999999998 589999987655678888754 344
Q ss_pred HHH
Q 017025 361 VKD 363 (379)
Q Consensus 361 V~~ 363 (379)
|..
T Consensus 847 I~~ 849 (1054)
T TIGR01657 847 VPN 849 (1054)
T ss_pred HHH
Confidence 443
No 111
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=94.60 E-value=0.16 Score=49.22 Aligned_cols=57 Identities=18% Similarity=0.306 Sum_probs=42.2
Q ss_pred cCCcEEEEEeCCCccCCCCC-CC-----------CcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHh
Q 017025 119 KGKKIVMFLDYDGTLAPIVE-DP-----------DRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFS 175 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~~-~p-----------d~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~ 175 (379)
...+.-|++|+|-||+.... +- ....++++.++.+++|.++ +|+=|-+..+.+.-.+
T Consensus 19 g~~~lqvisDFD~Tlt~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~Y~PiE~d~~~~~~eK~~ 88 (277)
T TIGR01544 19 GAAKLQIISDFDYTLSRFSYEDGKRCPTCHGIFDNCKLLTDECRKKLLQLKEKYYPIEVDPVLTVEEKYP 88 (277)
T ss_pred ChhheEEeeccCccceeeecCCCCCCcchHhHHhhCCCCCHHHHHHHHHHHhhccceecCCCCChHHhhh
Confidence 44667899999999998652 21 1356788999999999888 6887777777754333
No 112
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=94.58 E-value=0.048 Score=49.37 Aligned_cols=32 Identities=9% Similarity=0.060 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhcCCEEEEcCCChhhHHhhcc
Q 017025 147 NEMREAVRDVARYFPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 147 ~~~~~aL~~L~~~~~vaIaTGR~~~~l~~~~~ 178 (379)
|.+.+.|..|++..+++|+|+.....+..++.
T Consensus 71 pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~ 102 (205)
T PRK13582 71 PGAVEFLDWLRERFQVVILSDTFYEFAGPLMR 102 (205)
T ss_pred CCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHH
Confidence 45667888887778899999999988887653
No 113
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=94.51 E-value=0.041 Score=48.12 Aligned_cols=56 Identities=16% Similarity=0.240 Sum_probs=40.4
Q ss_pred EEEEEeCCCccCCCCCCCCc--------------ccCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhcc
Q 017025 123 IVMFLDYDGTLAPIVEDPDR--------------AFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 123 ~liflD~DGTLl~~~~~pd~--------------~~~s~~~~~aL~~L~~~~~vaIaTGR~~~~l~~~~~ 178 (379)
+++++|+||||+.....+.. -..-|.+.+.|+.+.+.+.++|.|..+...+...+.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~ 70 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLD 70 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHH
Confidence 57899999999986543211 124578899999998889999999999988887664
No 114
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=94.47 E-value=0.092 Score=40.16 Aligned_cols=58 Identities=33% Similarity=0.306 Sum_probs=43.8
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCC-cCCHHHHHHHHhcCCeEEEEecCCC--C------CCcceEEeCCHHH
Q 017025 296 KALEFLLEALGYANSKDVVPVYIGDD-RTDEDAFKVLRNRGQGFGILVSKTP--K------ETHASYSLQEPSE 360 (379)
Q Consensus 296 ~Al~~Lle~lg~~~~~~~~vi~~GD~-~NDe~mf~~~~~~~~G~gVaVgna~--~------~t~A~y~l~d~~e 360 (379)
..++.+++.++++.+ ++++|||+ .+|+.+=+.+. -.+|+|..+. . +..++|++.+..|
T Consensus 8 ~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~a~~~G----~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 8 GMLEQALKRLGVDPS---RCVMVGDSLETDIEAAKAAG----IDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp HHHHHHHHHHTSGGG---GEEEEESSTTTHHHHHHHTT----SEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred HHHHHHHHHcCCCHH---HEEEEcCCcHhHHHHHHHcC----CcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 457888899998875 89999999 99999888772 3478887753 2 1467888887654
No 115
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=94.43 E-value=0.13 Score=46.04 Aligned_cols=59 Identities=22% Similarity=0.264 Sum_probs=47.7
Q ss_pred CCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhccccCc
Q 017025 120 GKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVKLAGL 182 (379)
Q Consensus 120 ~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~l~~l 182 (379)
...+-+++|+|.||++- +....+|++++=+.+++++ ..++|+|--+...+..+..-.++
T Consensus 26 ~Gikgvi~DlDNTLv~w----d~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 26 HGIKGVILDLDNTLVPW----DNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred cCCcEEEEeccCceecc----cCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 34567899999999996 3457899999999999999 58999999888888877653333
No 116
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.39 E-value=0.057 Score=58.80 Aligned_cols=69 Identities=22% Similarity=0.239 Sum_probs=54.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEe--CCH
Q 017025 283 VLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSL--QEP 358 (379)
Q Consensus 283 ~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l--~d~ 358 (379)
.=|+.|. +|...++.|.+.- ..+.++||+.||-++|..+ ..||+||.+.. .+.|+.++ +|.
T Consensus 580 ~AellPe---dK~~~V~~l~~~g-------~~VamVGDGINDAPALA~A-----dVGiAmG~GtDvA~eaADvvL~~~dL 644 (713)
T COG2217 580 RAELLPE---DKAEIVRELQAEG-------RKVAMVGDGINDAPALAAA-----DVGIAMGSGTDVAIEAADVVLMRDDL 644 (713)
T ss_pred eccCCcH---HHHHHHHHHHhcC-------CEEEEEeCCchhHHHHhhc-----CeeEeecCCcHHHHHhCCEEEecCCH
Confidence 4578888 7999999988542 1699999999999999998 69999999653 37888887 467
Q ss_pred HHHHHHHH
Q 017025 359 SEVKDFLR 366 (379)
Q Consensus 359 ~eV~~~L~ 366 (379)
..|.+.++
T Consensus 645 ~~v~~ai~ 652 (713)
T COG2217 645 SAVPEAID 652 (713)
T ss_pred HHHHHHHH
Confidence 77666544
No 117
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.38 E-value=0.074 Score=47.99 Aligned_cols=58 Identities=16% Similarity=0.172 Sum_probs=42.3
Q ss_pred cEEEEEeCCCccCCCCCC-----------CC----------cccCCHHHHHHHHHHHhc-CCEEEEcCC-ChhhHHhhcc
Q 017025 122 KIVMFLDYDGTLAPIVED-----------PD----------RAFMTNEMREAVRDVARY-FPTAIVTGR-CRDKVFSFVK 178 (379)
Q Consensus 122 ~~liflD~DGTLl~~~~~-----------pd----------~~~~s~~~~~aL~~L~~~-~~vaIaTGR-~~~~l~~~~~ 178 (379)
.+|++||+|+||..+... +. ...+-+.+.+.|+.|+++ .+++|+|+. ....+..++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~ 81 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILG 81 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHH
Confidence 478999999999873211 11 234557889999999988 599999988 7776666654
Q ss_pred c
Q 017025 179 L 179 (379)
Q Consensus 179 l 179 (379)
.
T Consensus 82 ~ 82 (174)
T TIGR01685 82 T 82 (174)
T ss_pred h
Confidence 3
No 118
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=94.37 E-value=0.046 Score=51.71 Aligned_cols=78 Identities=33% Similarity=0.459 Sum_probs=49.2
Q ss_pred cCCCCCHHHHHHHHHHHh---CCCCCCCccEEEEcCCcCCHHHHHHHHhc-----CCeEEEE--ecCCCCCCcceEEe-C
Q 017025 288 PTIKWDKGKALEFLLEAL---GYANSKDVVPVYIGDDRTDEDAFKVLRNR-----GQGFGIL--VSKTPKETHASYSL-Q 356 (379)
Q Consensus 288 P~~g~sKG~Al~~Lle~l---g~~~~~~~~vi~~GD~~NDe~mf~~~~~~-----~~G~gVa--Vgna~~~t~A~y~l-~ 356 (379)
|. +.-||..|+.+++.. |... ..++|+||+.||.-....++.. ..||++. +.+.+..-.|.-+. .
T Consensus 146 ~~-NmCK~~il~~~~~~~~~~g~~~---~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~W~ 221 (234)
T PF06888_consen 146 PP-NMCKGKILERLLQEQAQRGVPY---DRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVPWS 221 (234)
T ss_pred CC-ccchHHHHHHHHHHHhhcCCCc---ceEEEECCCCCCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEecC
Confidence 56 778999999999984 4433 3899999999999876655431 0122220 11111123444333 6
Q ss_pred CHHHHHHHHHHHH
Q 017025 357 EPSEVKDFLRRLV 369 (379)
Q Consensus 357 d~~eV~~~L~~Lv 369 (379)
+-.++.+.|..|+
T Consensus 222 ~g~~i~~~l~~~i 234 (234)
T PF06888_consen 222 SGEEILEILLQLI 234 (234)
T ss_pred CHHHHHHHHHhhC
Confidence 7888888888763
No 119
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=94.29 E-value=0.05 Score=59.73 Aligned_cols=66 Identities=23% Similarity=0.280 Sum_probs=49.4
Q ss_pred EEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEe--CCHH
Q 017025 284 LEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSL--QEPS 359 (379)
Q Consensus 284 lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l--~d~~ 359 (379)
.++.|. +|...++.+.+. . .++++||+.||.++++.+ +.||+|+++.. ...|++++ ++..
T Consensus 611 ~~~~p~---~K~~~v~~l~~~-----~---~v~mvGDgiNDapAl~~A-----~vgia~g~~~~~a~~~adivl~~~~l~ 674 (741)
T PRK11033 611 AGLLPE---DKVKAVTELNQH-----A---PLAMVGDGINDAPAMKAA-----SIGIAMGSGTDVALETADAALTHNRLR 674 (741)
T ss_pred cCCCHH---HHHHHHHHHhcC-----C---CEEEEECCHHhHHHHHhC-----CeeEEecCCCHHHHHhCCEEEecCCHH
Confidence 345566 799988887531 1 599999999999999998 79999998763 25678877 4555
Q ss_pred HHHHHH
Q 017025 360 EVKDFL 365 (379)
Q Consensus 360 eV~~~L 365 (379)
++.+++
T Consensus 675 ~l~~~i 680 (741)
T PRK11033 675 GLAQMI 680 (741)
T ss_pred HHHHHH
Confidence 655433
No 120
>PLN02954 phosphoserine phosphatase
Probab=94.26 E-value=0.076 Score=48.84 Aligned_cols=34 Identities=15% Similarity=0.243 Sum_probs=25.6
Q ss_pred CCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc
Q 017025 145 MTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 145 ~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~ 178 (379)
+-|.+.+.|+.|+++ .+++|+||.....+..++.
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~ 119 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAA 119 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHH
Confidence 346667788888777 5899999999888777653
No 121
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=93.93 E-value=0.098 Score=47.92 Aligned_cols=33 Identities=15% Similarity=0.199 Sum_probs=21.9
Q ss_pred CCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhc
Q 017025 145 MTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFV 177 (379)
Q Consensus 145 ~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~ 177 (379)
+.+.+.+.|++|+++ .+++|+||.....+..++
T Consensus 86 ~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l 119 (219)
T TIGR00338 86 LTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVK 119 (219)
T ss_pred cCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH
Confidence 344666677777776 578888887766655544
No 122
>PLN03190 aminophospholipid translocase; Provisional
Probab=93.82 E-value=0.75 Score=53.14 Aligned_cols=69 Identities=17% Similarity=0.308 Sum_probs=45.8
Q ss_pred EEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCC--CCCcceEEeCCHHHHH
Q 017025 285 EIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTP--KETHASYSLQEPSEVK 362 (379)
Q Consensus 285 EI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~--~~t~A~y~l~d~~eV~ 362 (379)
-+.|. .|+.-++.+.+..+ .-++++||+.||.+|++.+. .|.||. |... ..-+|+|.+..-
T Consensus 853 R~sP~---QKa~IV~~vk~~~~------~vtlaIGDGaNDv~mIq~Ad---VGIGIs-G~EG~qA~~aSDfaI~~F---- 915 (1178)
T PLN03190 853 RVAPL---QKAGIVALVKNRTS------DMTLAIGDGANDVSMIQMAD---VGVGIS-GQEGRQAVMASDFAMGQF---- 915 (1178)
T ss_pred cCCHH---HHHHHHHHHHhcCC------cEEEEECCCcchHHHHHhcC---eeeeec-CchhHHHHHhhccchhhh----
Confidence 45677 79999887776532 15899999999999999983 244442 2221 125778877654
Q ss_pred HHHHHHHH
Q 017025 363 DFLRRLVQ 370 (379)
Q Consensus 363 ~~L~~Lv~ 370 (379)
++|.+|+-
T Consensus 916 r~L~rLLl 923 (1178)
T PLN03190 916 RFLVPLLL 923 (1178)
T ss_pred HHHHHHHH
Confidence 44555544
No 123
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=93.69 E-value=0.17 Score=48.17 Aligned_cols=69 Identities=12% Similarity=0.004 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHhCCC-CCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCCCC------------------------
Q 017025 294 KGKALEFLLEALGYA-NSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKTPK------------------------ 347 (379)
Q Consensus 294 KG~Al~~Lle~lg~~-~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna~~------------------------ 347 (379)
+...+...++.+|+. .+ ++++|||+.+|+.+=+.+ |+ .|.|..+..
T Consensus 160 ~p~~~~~a~~~l~~~~~~---e~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (267)
T PRK13478 160 YPWMALKNAIELGVYDVA---ACVKVDDTVPGIEEGLNA-----GMWTVGVILSGNELGLSEEEYQALSAAELAARRERA 231 (267)
T ss_pred ChHHHHHHHHHcCCCCCc---ceEEEcCcHHHHHHHHHC-----CCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHH
Confidence 456788999999985 33 799999999998877766 43 555544321
Q ss_pred -----CCcceEEeCCHHHHHHHHHHHHH
Q 017025 348 -----ETHASYSLQEPSEVKDFLRRLVQ 370 (379)
Q Consensus 348 -----~t~A~y~l~d~~eV~~~L~~Lv~ 370 (379)
+..|+|+++++.++.++|+.+..
T Consensus 232 ~~~l~~~~a~~vi~~~~~l~~~l~~~~~ 259 (267)
T PRK13478 232 RARLRAAGAHYVIDTIADLPAVIADIEA 259 (267)
T ss_pred HHHHHHcCCCeehhhHHHHHHHHHHHHH
Confidence 24688999999999998876543
No 124
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=93.66 E-value=0.11 Score=46.46 Aligned_cols=31 Identities=26% Similarity=0.142 Sum_probs=23.1
Q ss_pred HHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc
Q 017025 148 EMREAVRDVARY-FPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 148 ~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~ 178 (379)
.+.+.|+.|+++ .+++|+||.....+..+++
T Consensus 84 g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~ 115 (201)
T TIGR01491 84 YAEELVRWLKEKGLKTAIVSGGIMCLAKKVAE 115 (201)
T ss_pred cHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHH
Confidence 446667777777 5899999998887777653
No 125
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=93.62 E-value=0.068 Score=49.40 Aligned_cols=15 Identities=40% Similarity=0.753 Sum_probs=12.8
Q ss_pred cEEEEEeCCCccCCC
Q 017025 122 KIVMFLDYDGTLAPI 136 (379)
Q Consensus 122 ~~liflD~DGTLl~~ 136 (379)
+++++||+||||+..
T Consensus 3 ~~~vifDfDgTi~~~ 17 (219)
T PRK09552 3 SIQIFCDFDGTITNN 17 (219)
T ss_pred CcEEEEcCCCCCCcc
Confidence 458999999999984
No 126
>PRK08238 hypothetical protein; Validated
Probab=93.58 E-value=0.16 Score=52.90 Aligned_cols=47 Identities=13% Similarity=-0.019 Sum_probs=34.7
Q ss_pred cCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhccccC--ceEEecCCc
Q 017025 144 FMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVKLAG--LYYAGSHGM 190 (379)
Q Consensus 144 ~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~l~~--l~li~~nGa 190 (379)
.+.+++.+.|+++++. .+++|+|+.+...++.+....+ ..++|+++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~~ 121 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDGVFASDGT 121 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCCc
Confidence 3558899999999998 5999999999988877654321 245655543
No 127
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=93.50 E-value=0.15 Score=45.07 Aligned_cols=60 Identities=22% Similarity=0.326 Sum_probs=46.4
Q ss_pred cCCcEEEEEeCCCccCCCCCCCCc------------------------------ccCCHHHHHHHHHHHhcCCEEEEcCC
Q 017025 119 KGKKIVMFLDYDGTLAPIVEDPDR------------------------------AFMTNEMREAVRDVARYFPTAIVTGR 168 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~~~pd~------------------------------~~~s~~~~~aL~~L~~~~~vaIaTGR 168 (379)
..+|+.+++|+|.||+.....|.. ..+-|.+.+.|.+|.+.+.++|+|..
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~ 82 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG 82 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence 567889999999999985544311 11246788999999977899999999
Q ss_pred ChhhHHhhcc
Q 017025 169 CRDKVFSFVK 178 (379)
Q Consensus 169 ~~~~l~~~~~ 178 (379)
+...+...++
T Consensus 83 ~~~yA~~vl~ 92 (156)
T TIGR02250 83 TRAYAQAIAK 92 (156)
T ss_pred cHHHHHHHHH
Confidence 9988887664
No 128
>PTZ00445 p36-lilke protein; Provisional
Probab=93.43 E-value=0.15 Score=47.31 Aligned_cols=59 Identities=19% Similarity=0.201 Sum_probs=41.5
Q ss_pred HHHHHhc-cCCcEEEEEeCCCccCCC-CC---CCC------cccCCHHHHHHHHHHHhc-CCEEEEcCCCh
Q 017025 112 EEIVNAS-KGKKIVMFLDYDGTLAPI-VE---DPD------RAFMTNEMREAVRDVARY-FPTAIVTGRCR 170 (379)
Q Consensus 112 ~~~~~~~-~~k~~liflD~DGTLl~~-~~---~pd------~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~ 170 (379)
+.+++.. +..-++|++|+|-||+.. .. +|+ -..++|+.++.+.+|.+. ++++|+|=.+.
T Consensus 32 ~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~ 102 (219)
T PTZ00445 32 DKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccch
Confidence 3444444 567799999999999981 11 121 122789999999999987 79999985544
No 129
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=93.38 E-value=0.16 Score=45.01 Aligned_cols=37 Identities=35% Similarity=0.346 Sum_probs=30.7
Q ss_pred cCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 288 PTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 288 P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
+. |..|+..++.+++.. . ..++++||+.||+.|.+.+
T Consensus 145 ~~-g~~K~~~~~~~~~~~---~---~~~i~iGD~~~D~~aa~~~ 181 (188)
T TIGR01489 145 PC-GCCKGKVIHKLSEPK---Y---QHIIYIGDGVTDVCPAKLS 181 (188)
T ss_pred CC-CCCHHHHHHHHHhhc---C---ceEEEECCCcchhchHhcC
Confidence 45 778999999998875 2 2799999999999987765
No 130
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=93.25 E-value=0.12 Score=47.49 Aligned_cols=66 Identities=21% Similarity=0.120 Sum_probs=44.9
Q ss_pred CCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCC-C---CCCcceEEeCCHHHHHHHHHH
Q 017025 292 WDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKT-P---KETHASYSLQEPSEVKDFLRR 367 (379)
Q Consensus 292 ~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna-~---~~t~A~y~l~d~~eV~~~L~~ 367 (379)
..|..+++.+.. .. ..+++|||+.||..|.+.+ ++.++=++- . ....+.+..++-.+|.++|++
T Consensus 143 ~~K~~~l~~~~~----~~---~~~i~iGDg~~D~~~a~~A-----d~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~ 210 (214)
T TIGR03333 143 CCKPSLIRKLSE----PN---DYHIVIGDSVTDVEAAKQS-----DLCFARDYLLNECEELGLNHAPFQDFYDVRKELEN 210 (214)
T ss_pred CCHHHHHHHHhh----cC---CcEEEEeCCHHHHHHHHhC-----CeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHHH
Confidence 458888886653 22 2699999999999999887 676553321 1 123344446788899988876
Q ss_pred HH
Q 017025 368 LV 369 (379)
Q Consensus 368 Lv 369 (379)
+.
T Consensus 211 ~~ 212 (214)
T TIGR03333 211 VK 212 (214)
T ss_pred Hh
Confidence 54
No 131
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=93.22 E-value=0.078 Score=46.62 Aligned_cols=33 Identities=21% Similarity=0.123 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc
Q 017025 146 TNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 146 s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~ 178 (379)
.+.+.+.|+.++++ .+++|+||.....+..++.
T Consensus 75 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~ 108 (177)
T TIGR01488 75 RPGARELISWLKERGIDTVIVSGGFDFFVEPVAE 108 (177)
T ss_pred CcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHH
Confidence 35677777777777 5899999998887777653
No 132
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=93.19 E-value=0.17 Score=49.72 Aligned_cols=57 Identities=25% Similarity=0.312 Sum_probs=43.8
Q ss_pred cEEEEEeCCCccCCCC--CC-CCc---ccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc
Q 017025 122 KIVMFLDYDGTLAPIV--ED-PDR---AFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 122 ~~liflD~DGTLl~~~--~~-pd~---~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~ 178 (379)
+++|++|+|+||..-+ ++ +.. ....+.+.++|++|.+. +.++|||..+...+...+.
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~ 66 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFE 66 (320)
T ss_pred eEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Confidence 5889999999999854 21 111 12347899999999998 5899999999988887664
No 133
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=93.10 E-value=0.13 Score=47.20 Aligned_cols=59 Identities=15% Similarity=0.102 Sum_probs=44.7
Q ss_pred cCCcEEEEEeCCCccCCCCCC--CCcccCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhc
Q 017025 119 KGKKIVMFLDYDGTLAPIVED--PDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFV 177 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~~~--pd~~~~s~~~~~aL~~L~~~~~vaIaTGR~~~~l~~~~ 177 (379)
...++++++|+|+||+.+... +.....-|-+.+.|+.+.+.+.++|=|..+...+...+
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l 78 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKM 78 (195)
T ss_pred CCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHH
Confidence 345688999999999975311 11234557789999999999999999999887777654
No 134
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=93.04 E-value=0.13 Score=55.94 Aligned_cols=68 Identities=16% Similarity=0.256 Sum_probs=52.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEeC--CH
Q 017025 283 VLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSLQ--EP 358 (379)
Q Consensus 283 ~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l~--d~ 358 (379)
+-+..|. +|-.-++.+.+. | ..+.+.||+.||-++|+.+ ..||+|+++.. ++.|+.++- |+
T Consensus 488 ~A~~~Pe---dK~~iV~~lQ~~-G------~~VaMtGDGvNDAPALa~A-----DVGIAMgsGTdvAkeAADiVLldd~~ 552 (679)
T PRK01122 488 LAEATPE---DKLALIRQEQAE-G------RLVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAGNMVDLDSNP 552 (679)
T ss_pred EccCCHH---HHHHHHHHHHHc-C------CeEEEECCCcchHHHHHhC-----CEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 3456677 799999887764 2 2589999999999999998 69999998753 578898873 56
Q ss_pred HHHHHHH
Q 017025 359 SEVKDFL 365 (379)
Q Consensus 359 ~eV~~~L 365 (379)
..+.+.+
T Consensus 553 s~Iv~av 559 (679)
T PRK01122 553 TKLIEVV 559 (679)
T ss_pred HHHHHHH
Confidence 6655544
No 135
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=92.92 E-value=0.19 Score=56.38 Aligned_cols=66 Identities=23% Similarity=0.302 Sum_probs=48.2
Q ss_pred EEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC---CCcceEEeC--CHH
Q 017025 285 EIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK---ETHASYSLQ--EPS 359 (379)
Q Consensus 285 EI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~---~t~A~y~l~--d~~ 359 (379)
...|. +|...++.|.+ .| ..+.++||+.||.+|++.+ +.||+||+... +..|++++. +..
T Consensus 600 r~~P~---~K~~iv~~lq~-~g------~~v~mvGDGvND~pAl~~A-----dVGia~g~~g~~va~~aaDivl~dd~~~ 664 (884)
T TIGR01522 600 RASPE---HKMKIVKALQK-RG------DVVAMTGDGVNDAPALKLA-----DIGVAMGQTGTDVAKEAADMILTDDDFA 664 (884)
T ss_pred ECCHH---HHHHHHHHHHH-CC------CEEEEECCCcccHHHHHhC-----CeeEecCCCcCHHHHHhcCEEEcCCCHH
Confidence 34455 78777777654 33 2699999999999999998 79999985322 368899984 566
Q ss_pred HHHHHH
Q 017025 360 EVKDFL 365 (379)
Q Consensus 360 eV~~~L 365 (379)
.+...+
T Consensus 665 ~i~~~i 670 (884)
T TIGR01522 665 TILSAI 670 (884)
T ss_pred HHHHHH
Confidence 665543
No 136
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=92.86 E-value=0.19 Score=49.57 Aligned_cols=48 Identities=13% Similarity=0.148 Sum_probs=35.4
Q ss_pred ccEEEEcCCc-CCHHHHHHHHhcCCeE-EEEecCCC--CC-----CcceEEeCCHHHHHHHH
Q 017025 313 VVPVYIGDDR-TDEDAFKVLRNRGQGF-GILVSKTP--KE-----THASYSLQEPSEVKDFL 365 (379)
Q Consensus 313 ~~vi~~GD~~-NDe~mf~~~~~~~~G~-gVaVgna~--~~-----t~A~y~l~d~~eV~~~L 365 (379)
+++++|||+. +|+.+=+.+ |+ +|+|..+. .+ -..+|++++..++..+|
T Consensus 264 ~~~~mIGD~~~tDI~ga~~~-----G~~silV~tG~~~~~~~~~~~~p~~vv~~l~e~~~~i 320 (321)
T TIGR01456 264 HALYMVGDNPASDIIGAQNY-----GWFSCLVKTGVYNGGDDLKECKPTLIVNDVFDAVTKI 320 (321)
T ss_pred heEEEEcCChhhhhhhHHhC-----CceEEEecccccCCCCCCCCCCCCEEECCHHHHHHHh
Confidence 3799999997 998876665 55 88887651 11 23678899998888775
No 137
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=92.71 E-value=0.12 Score=56.01 Aligned_cols=68 Identities=19% Similarity=0.280 Sum_probs=51.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEeC--CH
Q 017025 283 VLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSLQ--EP 358 (379)
Q Consensus 283 ~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l~--d~ 358 (379)
+-++.|. +|-..++.+.+. | ..+.+.||+.||-++++.+ ..||+|+++.. ++.|+.++- ++
T Consensus 484 ~A~~~Pe---dK~~iV~~lQ~~-G------~~VaMtGDGvNDAPALa~A-----DVGIAMgsGTdvAkeAADiVLldd~l 548 (673)
T PRK14010 484 VAECKPE---DKINVIREEQAK-G------HIVAMTGDGTNDAPALAEA-----NVGLAMNSGTMSAKEAANLIDLDSNP 548 (673)
T ss_pred EcCCCHH---HHHHHHHHHHhC-C------CEEEEECCChhhHHHHHhC-----CEEEEeCCCCHHHHHhCCEEEcCCCH
Confidence 3466677 799888887654 2 2588999999999999998 69999998763 588999884 55
Q ss_pred HHHHHHH
Q 017025 359 SEVKDFL 365 (379)
Q Consensus 359 ~eV~~~L 365 (379)
..+.+.+
T Consensus 549 s~Iv~av 555 (673)
T PRK14010 549 TKLMEVV 555 (673)
T ss_pred HHHHHHH
Confidence 5554433
No 138
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=92.71 E-value=0.14 Score=47.15 Aligned_cols=35 Identities=11% Similarity=0.035 Sum_probs=28.2
Q ss_pred cCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhcc
Q 017025 144 FMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 144 ~~s~~~~~aL~~L~~~~~vaIaTGR~~~~l~~~~~ 178 (379)
.+.|.+.+.|+.+++..+++|+||.....+..++.
T Consensus 68 ~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~ 102 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMR 102 (203)
T ss_pred CCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHH
Confidence 45667788888888778999999999988877653
No 139
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=92.66 E-value=0.12 Score=49.82 Aligned_cols=50 Identities=24% Similarity=0.222 Sum_probs=37.5
Q ss_pred CcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEc---CCChhhHHhh
Q 017025 121 KKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVT---GRCRDKVFSF 176 (379)
Q Consensus 121 k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaT---GR~~~~l~~~ 176 (379)
+...++||+||||.. ....-|...++|++|+++ .+++++| .|++..+.+.
T Consensus 7 ~y~~~l~DlDGvl~~------G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 7 KYDGFLFDLDGVLYR------GNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred hcCEEEEcCcCceEe------CCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 345699999999997 234567899999999999 6888885 4555544443
No 140
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=92.63 E-value=0.17 Score=47.04 Aligned_cols=35 Identities=17% Similarity=0.071 Sum_probs=28.9
Q ss_pred ccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhc
Q 017025 143 AFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFV 177 (379)
Q Consensus 143 ~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~ 177 (379)
-.+.+..++.++.+++. ..++|+||-....+.++.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia 111 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIA 111 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHH
Confidence 35677888999999999 699999999987777654
No 141
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=92.62 E-value=1.1 Score=40.30 Aligned_cols=38 Identities=18% Similarity=0.206 Sum_probs=27.5
Q ss_pred eCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCc
Q 017025 279 QGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDR 322 (379)
Q Consensus 279 ~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~ 322 (379)
..-.++||.|. +|-+=++.|.+..|++.+ ++++|=|..
T Consensus 97 ~~F~~~eI~~g---sK~~Hf~~i~~~tgI~y~---eMlFFDDe~ 134 (169)
T PF12689_consen 97 EYFDYLEIYPG---SKTTHFRRIHRKTGIPYE---EMLFFDDES 134 (169)
T ss_dssp CCECEEEESSS----HHHHHHHHHHHH---GG---GEEEEES-H
T ss_pred hhcchhheecC---chHHHHHHHHHhcCCChh---HEEEecCch
Confidence 33456999987 899999999999999875 899998854
No 142
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=92.61 E-value=0.11 Score=46.18 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=26.8
Q ss_pred CHHHHHHHH---HHHhCCCCCCCccEEEEcCCcCCHHHHH
Q 017025 293 DKGKALEFL---LEALGYANSKDVVPVYIGDDRTDEDAFK 329 (379)
Q Consensus 293 sKG~Al~~L---le~lg~~~~~~~~vi~~GD~~NDe~mf~ 329 (379)
+|..+++.+ ... +.... .++++||+.||.+||+
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~---~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPD---RVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCC---EEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCC---eEEEEECCHHHHHHhC
Confidence 499999999 443 44443 7999999999999986
No 143
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=92.59 E-value=0.22 Score=55.69 Aligned_cols=59 Identities=22% Similarity=0.372 Sum_probs=47.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEeC
Q 017025 283 VLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSLQ 356 (379)
Q Consensus 283 ~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l~ 356 (379)
+-.+.|. +|..-++.|.+. |. .+.++||+.||.++++.+ ..||+|+++.. +..|+.++-
T Consensus 583 fAr~~Pe---~K~~iV~~lq~~-G~------vVam~GDGvNDapALk~A-----dVGIAmg~gtdvAk~aADiVLl 643 (867)
T TIGR01524 583 FARLTPM---QKSRIIGLLKKA-GH------TVGFLGDGINDAPALRKA-----DVGISVDTAADIAKEASDIILL 643 (867)
T ss_pred EEECCHH---HHHHHHHHHHhC-CC------EEEEECCCcccHHHHHhC-----CEEEEeCCccHHHHHhCCEEEe
Confidence 4456677 799999987653 32 589999999999999998 79999997653 578998884
No 144
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=92.50 E-value=0.11 Score=55.69 Aligned_cols=64 Identities=27% Similarity=0.382 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCCC--CcceEEeCCHHHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPKE--THASYSLQEPSEVKDFLR 366 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~~--t~A~y~l~d~~eV~~~L~ 366 (379)
-|+..++-|.++-|. .+.||||+.||..|.+.++ .|.||. |+..+. -+|+|++..-..|.+.|-
T Consensus 768 QKA~v~~llq~~t~k------rvc~IGDGGNDVsMIq~A~---~GiGI~-gkEGkQASLAADfSItqF~Hv~rLLl 833 (1051)
T KOG0210|consen 768 QKAQVVRLLQKKTGK------RVCAIGDGGNDVSMIQAAD---VGIGIV-GKEGKQASLAADFSITQFSHVSRLLL 833 (1051)
T ss_pred HHHHHHHHHHHhhCc------eEEEEcCCCccchheeecc---cceeee-cccccccchhccccHHHHHHHHHHhh
Confidence 799999888888773 5899999999999999985 488874 555444 478998877766666543
No 145
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=92.45 E-value=0.23 Score=43.99 Aligned_cols=57 Identities=19% Similarity=0.268 Sum_probs=41.1
Q ss_pred cEEEEEeCCCccCCCCCCCCc-------------------ccCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhcc
Q 017025 122 KIVMFLDYDGTLAPIVEDPDR-------------------AFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 122 ~~liflD~DGTLl~~~~~pd~-------------------~~~s~~~~~aL~~L~~~~~vaIaTGR~~~~l~~~~~ 178 (379)
++.+++|+|+||......|.. -..-|.+.+.|.+|.+.+.++|.|..+...+..++.
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~ 76 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLD 76 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHH
Confidence 356899999999976554421 023456788888888778888888888877776653
No 146
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=92.44 E-value=0.033 Score=52.41 Aligned_cols=52 Identities=19% Similarity=0.150 Sum_probs=37.4
Q ss_pred CCcEEEEEeCCCccCCCCCC------------CC---------cccCCHHHHHHHHHHHhc-CCEEEEcCCChh
Q 017025 120 GKKIVMFLDYDGTLAPIVED------------PD---------RAFMTNEMREAVRDVARY-FPTAIVTGRCRD 171 (379)
Q Consensus 120 ~k~~liflD~DGTLl~~~~~------------pd---------~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~ 171 (379)
.++.+++||+|+|++..... |. .+..-|.+++.++.+.+. +.|+++|||+-.
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 78899999999998852110 10 123344578888888888 589999999876
No 147
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=92.04 E-value=0.17 Score=46.54 Aligned_cols=33 Identities=18% Similarity=0.309 Sum_probs=24.4
Q ss_pred CCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhc
Q 017025 145 MTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFV 177 (379)
Q Consensus 145 ~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~ 177 (379)
+.+.+.+.|+.|+++ .+++|+||.....+..++
T Consensus 71 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il 104 (214)
T TIGR03333 71 IREGFREFVAFINEHGIPFYVISGGMDFFVYPLL 104 (214)
T ss_pred ccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHH
Confidence 445666777777776 588999998887777655
No 148
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=91.99 E-value=0.42 Score=53.70 Aligned_cols=61 Identities=25% Similarity=0.383 Sum_probs=49.8
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEeCC
Q 017025 282 MVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSLQE 357 (379)
Q Consensus 282 ~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l~d 357 (379)
-+-.+.|. +|..-++.|.+. |. -+.++||+.||-++++.+ ..||+|+++.. +..|+.++-+
T Consensus 617 VfAr~sPe---~K~~IV~~Lq~~-G~------vVam~GDGvNDaPALk~A-----DVGIAmg~gtdvAkeaADiVLld 679 (902)
T PRK10517 617 LFARLTPM---HKERIVTLLKRE-GH------VVGFMGDGINDAPALRAA-----DIGISVDGAVDIAREAADIILLE 679 (902)
T ss_pred EEEEcCHH---HHHHHHHHHHHC-CC------EEEEECCCcchHHHHHhC-----CEEEEeCCcCHHHHHhCCEEEec
Confidence 45667888 799999988763 42 589999999999999998 69999998753 5889998853
No 149
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=91.92 E-value=0.21 Score=57.06 Aligned_cols=65 Identities=18% Similarity=0.242 Sum_probs=48.9
Q ss_pred EEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEec-CCC--CCCcceEEeCC--H
Q 017025 284 LEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVS-KTP--KETHASYSLQE--P 358 (379)
Q Consensus 284 lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVg-na~--~~t~A~y~l~d--~ 358 (379)
-.+.|. +|..-++.|.+. |. .+.++||+.||.+|++.+ ..||+|| ++. .+..|++++.+ -
T Consensus 727 ar~sP~---~K~~iV~~lq~~-g~------~Vam~GDGvNDapaLk~A-----dVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 727 ARCAPQ---TKVKMIEALHRR-KA------FCAMTGDGVNDSPSLKMA-----NVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred EecCHH---HHHHHHHHHHhc-CC------eeEEeCCCcchHHHHHhC-----CccEecCCCccHHHHHhcCEEEecCCH
Confidence 345566 799999888764 31 588999999999999998 7999998 443 24789999854 4
Q ss_pred HHHHH
Q 017025 359 SEVKD 363 (379)
Q Consensus 359 ~eV~~ 363 (379)
..+..
T Consensus 792 ~~I~~ 796 (1053)
T TIGR01523 792 ASILN 796 (1053)
T ss_pred HHHHH
Confidence 44443
No 150
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=91.89 E-value=0.34 Score=45.57 Aligned_cols=64 Identities=16% Similarity=0.116 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhCCC-CCCCccEEEEcCCcCCHHHHHHHHhcCCe-EEEEecCCCC------------------------
Q 017025 294 KGKALEFLLEALGYA-NSKDVVPVYIGDDRTDEDAFKVLRNRGQG-FGILVSKTPK------------------------ 347 (379)
Q Consensus 294 KG~Al~~Lle~lg~~-~~~~~~vi~~GD~~NDe~mf~~~~~~~~G-~gVaVgna~~------------------------ 347 (379)
+-..+...++.+|+. .+ ++++|||+.+|+.+=+.+ | ..|.|..+..
T Consensus 158 ~p~~~~~a~~~l~~~~~~---~~l~IGDs~~Di~aA~~a-----Gi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (253)
T TIGR01422 158 APWMALKNAIELGVYDVA---ACVKVGDTVPDIEEGRNA-----GMWTVGLILSSNELGLSEEEYRALDPAELEARRAEA 229 (253)
T ss_pred CHHHHHHHHHHcCCCCch---heEEECCcHHHHHHHHHC-----CCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHH
Confidence 456788899999984 54 799999999998877766 4 3555543321
Q ss_pred -----CCcceEEeCCHHHHHHHH
Q 017025 348 -----ETHASYSLQEPSEVKDFL 365 (379)
Q Consensus 348 -----~t~A~y~l~d~~eV~~~L 365 (379)
+..|+|+++++.++..+|
T Consensus 230 ~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 230 TARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHhcCCCEehhcHHHHHHhh
Confidence 246789999998877654
No 151
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=91.88 E-value=0.39 Score=43.76 Aligned_cols=64 Identities=17% Similarity=0.362 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHh-CCCCCCCccEEEEcCCc-CCHHHHHHHHhcCCeE-EEEecCC--C--CCCcceEEeCCHHHHHHHH
Q 017025 294 KGKALEFLLEAL-GYANSKDVVPVYIGDDR-TDEDAFKVLRNRGQGF-GILVSKT--P--KETHASYSLQEPSEVKDFL 365 (379)
Q Consensus 294 KG~Al~~Lle~l-g~~~~~~~~vi~~GD~~-NDe~mf~~~~~~~~G~-gVaVgna--~--~~t~A~y~l~d~~eV~~~L 365 (379)
+....+.+++.+ |++.+ ++++|||+. +|+.+=+.+ |. +|.+... + .+..+.|.+.++.++.++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~---~~v~igD~~~~di~~A~~~-----G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 154 DKEIFNYALERMPKFSKE---EVLMIGDSLTADIKGGQNA-----GLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEIL 224 (224)
T ss_pred CHHHHHHHHHHhcCCCch---heEEECCCcHHHHHHHHHC-----CCcEEEECCCCCCCCCCCCCceEECCHHHHHhhC
Confidence 456788999999 98875 899999998 798877766 54 4444332 1 2246778999999987764
No 152
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=91.72 E-value=0.15 Score=45.97 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 296 KALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 296 ~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
+.+..+++.|++... .++++||+.||..|++.+
T Consensus 182 k~~~~~i~~l~~~~~---~v~~vGDg~nD~~al~~A 214 (215)
T PF00702_consen 182 KIFLRIIKELQVKPG---EVAMVGDGVNDAPALKAA 214 (215)
T ss_dssp HHHHHHHHHHTCTGG---GEEEEESSGGHHHHHHHS
T ss_pred hhHHHHHHHHhcCCC---EEEEEccCHHHHHHHHhC
Confidence 377889999998764 899999999999999875
No 153
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=91.69 E-value=0.34 Score=44.31 Aligned_cols=64 Identities=17% Similarity=0.122 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhCCC-CCCCccEEEEcCCcCCHHHHHHHHhcCCeEE--EEecCCC--C----CCcceEEeCCHHHHHHH
Q 017025 294 KGKALEFLLEALGYA-NSKDVVPVYIGDDRTDEDAFKVLRNRGQGFG--ILVSKTP--K----ETHASYSLQEPSEVKDF 364 (379)
Q Consensus 294 KG~Al~~Lle~lg~~-~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~g--VaVgna~--~----~t~A~y~l~d~~eV~~~ 364 (379)
+...++.+++++|+. .+ .+++|||+.+|+.+=+.+ |+. |.+.... . ...++|++.+..++.++
T Consensus 147 ~p~~~~~a~~~~~~~~~~---~~~~igD~~~Di~aa~~a-----G~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 218 (220)
T TIGR03351 147 APDLILRAMELTGVQDVQ---SVAVAGDTPNDLEAGINA-----GAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPAL 218 (220)
T ss_pred CHHHHHHHHHHcCCCChh---HeEEeCCCHHHHHHHHHC-----CCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHh
Confidence 568899999999986 34 799999999998888776 554 4454321 1 24678888998887665
Q ss_pred H
Q 017025 365 L 365 (379)
Q Consensus 365 L 365 (379)
+
T Consensus 219 ~ 219 (220)
T TIGR03351 219 L 219 (220)
T ss_pred h
Confidence 4
No 154
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=91.69 E-value=0.3 Score=54.87 Aligned_cols=60 Identities=23% Similarity=0.351 Sum_probs=49.1
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEeC
Q 017025 282 MVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSLQ 356 (379)
Q Consensus 282 ~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l~ 356 (379)
-+-.+.|. +|..-++.|.+. | .-+.++||+.||-++++.+ ..||+||++.. +..|+.++-
T Consensus 617 VfAr~sPe---~K~~iV~~Lq~~-G------~vVamtGDGvNDaPALk~A-----DVGIAmg~gtdvAkeaADiVLl 678 (903)
T PRK15122 617 VFAKLTPL---QKSRVLKALQAN-G------HTVGFLGDGINDAPALRDA-----DVGISVDSGADIAKESADIILL 678 (903)
T ss_pred EEEEeCHH---HHHHHHHHHHhC-C------CEEEEECCCchhHHHHHhC-----CEEEEeCcccHHHHHhcCEEEe
Confidence 45667788 799999988764 3 2588999999999999998 69999997653 588999884
No 155
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=91.47 E-value=0.28 Score=55.70 Aligned_cols=59 Identities=20% Similarity=0.209 Sum_probs=45.5
Q ss_pred EEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCC---CCCcceEEeCC
Q 017025 284 LEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTP---KETHASYSLQE 357 (379)
Q Consensus 284 lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~---~~t~A~y~l~d 357 (379)
-.+.|. +|..-++.|.+ .|. -+.++||+.||.+||+.+ ..||+||+.. .+..|++++.|
T Consensus 665 aR~sPe---qK~~IV~~lq~-~g~------vv~~~GDG~ND~paLk~A-----dVGiamg~~G~~vak~aADivL~d 726 (997)
T TIGR01106 665 ARTSPQ---QKLIIVEGCQR-QGA------IVAVTGDGVNDSPALKKA-----DIGVAMGIAGSDVSKQAADMILLD 726 (997)
T ss_pred EECCHH---HHHHHHHHHHH-CCC------EEEEECCCcccHHHHhhC-----CcceecCCcccHHHHHhhceEEec
Confidence 344566 78888887764 342 589999999999999998 6999999643 24788999865
No 156
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=91.37 E-value=0.35 Score=53.36 Aligned_cols=61 Identities=28% Similarity=0.323 Sum_probs=48.5
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEeCC
Q 017025 282 MVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSLQE 357 (379)
Q Consensus 282 ~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l~d 357 (379)
-+-++.|. +|..-++.|.+. |. -+.++||+.||.++|+.+ ..||+|+++.. +..|+.++-+
T Consensus 514 vfAr~~Pe---~K~~iV~~lq~~-G~------~VamvGDGvNDapAL~~A-----dVGIAm~~gtdvAkeaADivLl~ 576 (755)
T TIGR01647 514 GFAEVFPE---HKYEIVEILQKR-GH------LVGMTGDGVNDAPALKKA-----DVGIAVAGATDAARSAADIVLTE 576 (755)
T ss_pred EEEecCHH---HHHHHHHHHHhc-CC------EEEEEcCCcccHHHHHhC-----CeeEEecCCcHHHHHhCCEEEEc
Confidence 35567788 799998887653 32 699999999999999998 69999998763 5788988743
No 157
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=91.20 E-value=0.55 Score=47.59 Aligned_cols=73 Identities=11% Similarity=0.076 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC-C--CcceEEeCCHHHH-HHHHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK-E--THASYSLQEPSEV-KDFLRRLV 369 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~-~--t~A~y~l~d~~eV-~~~L~~Lv 369 (379)
+...+...++.+|+..+ ++++|||+.+|+.+=+.+ | -..|.+..... + ..|+|++.+..++ ...|+.|+
T Consensus 274 ~Peifl~A~~~lgl~Pe---ecl~IGDS~~DIeAAk~A---G-m~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~~l~~l~ 346 (381)
T PLN02575 274 DPEMFIYAAQLLNFIPE---RCIVFGNSNQTVEAAHDA---R-MKCVAVASKHPIYELGAADLVVRRLDELSIVDLKNLA 346 (381)
T ss_pred CHHHHHHHHHHcCCCcc---cEEEEcCCHHHHHHHHHc---C-CEEEEECCCCChhHhcCCCEEECCHHHHHHHHHhhhh
Confidence 56788999999999875 899999999998776665 1 23666665331 1 4588999999997 56677777
Q ss_pred Hhhh
Q 017025 370 QWKR 373 (379)
Q Consensus 370 ~~~~ 373 (379)
....
T Consensus 347 ~~~~ 350 (381)
T PLN02575 347 DIES 350 (381)
T ss_pred hcCc
Confidence 6554
No 158
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=91.12 E-value=0.31 Score=46.99 Aligned_cols=52 Identities=27% Similarity=0.336 Sum_probs=37.9
Q ss_pred CcEEEEEeCCCccCCC-------C---C--C---CC-------cccCCHHHHHHHHHHHhc-CCEEEEcCCChhh
Q 017025 121 KKIVMFLDYDGTLAPI-------V---E--D---PD-------RAFMTNEMREAVRDVARY-FPTAIVTGRCRDK 172 (379)
Q Consensus 121 k~~liflD~DGTLl~~-------~---~--~---pd-------~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~ 172 (379)
.+-+++||+|+|++.. . + + -+ .+..-|.+++..+.+.+. +.++++|||+-..
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDK 174 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 3578999999999931 0 0 0 01 344467889999999988 6899999998644
No 159
>PRK09449 dUMP phosphatase; Provisional
Probab=91.11 E-value=0.76 Score=42.13 Aligned_cols=66 Identities=17% Similarity=0.255 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCc-CCHHHHHHHHhcCCeE-EEEecCCC----CCCcceEEeCCHHHHHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDR-TDEDAFKVLRNRGQGF-GILVSKTP----KETHASYSLQEPSEVKDFLR 366 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~-NDe~mf~~~~~~~~G~-gVaVgna~----~~t~A~y~l~d~~eV~~~L~ 366 (379)
+-.....+++.+|+... +++++|||+. +|+.+=+.+ |+ +|.+.... ....++|.+.++.++.++|.
T Consensus 152 ~p~~~~~~~~~~~~~~~--~~~~~vgD~~~~Di~~A~~a-----G~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 152 DVAIFDYALEQMGNPDR--SRVLMVGDNLHSDILGGINA-----GIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred CHHHHHHHHHHcCCCCc--ccEEEEcCCcHHHHHHHHHC-----CCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHHh
Confidence 35678999999997531 3799999997 698876665 55 55654221 12357899999999988765
No 160
>PRK11587 putative phosphatase; Provisional
Probab=91.07 E-value=0.48 Score=43.55 Aligned_cols=60 Identities=17% Similarity=0.078 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCCCC---CCcceEEeCCHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKTPK---ETHASYSLQEPSEV 361 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna~~---~t~A~y~l~d~~eV 361 (379)
+.......++.+|+.++ ++++|||+.+|+.+=+.+ |. +|.+.+... ...++|++.+..++
T Consensus 140 ~p~~~~~~~~~~g~~p~---~~l~igDs~~di~aA~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQ---ECVVVEDAPAGVLSGLAA-----GCHVIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHcCCCcc---cEEEEecchhhhHHHHHC-----CCEEEEECCCCchhhhccCCEEecchhhe
Confidence 46778888999999875 899999999998766665 44 677765432 24678888887765
No 161
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=90.69 E-value=0.22 Score=45.24 Aligned_cols=45 Identities=24% Similarity=0.310 Sum_probs=32.9
Q ss_pred cEEEEEeCCCccCCCC----CCCCcccCCHHHHHHHHHHHhc-CCEEEEc
Q 017025 122 KIVMFLDYDGTLAPIV----EDPDRAFMTNEMREAVRDVARY-FPTAIVT 166 (379)
Q Consensus 122 ~~liflD~DGTLl~~~----~~pd~~~~s~~~~~aL~~L~~~-~~vaIaT 166 (379)
++++|+|-||||--.. +.++.-..-+.+.+++..|.+. +.++|+|
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvT 54 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRAGYKLVVVT 54 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhCCCeEEEEE
Confidence 6789999999997522 2233445667889999999877 5777766
No 162
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=90.60 E-value=0.52 Score=42.91 Aligned_cols=37 Identities=27% Similarity=0.219 Sum_probs=29.5
Q ss_pred EcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 287 RPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 287 ~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
.+- |.+|+..+..+.+.. +.++|+||+..|+++-+..
T Consensus 142 s~f-G~dK~~vI~~l~e~~-------e~~fy~GDsvsDlsaakls 178 (220)
T COG4359 142 SQF-GHDKSSVIHELSEPN-------ESIFYCGDSVSDLSAAKLS 178 (220)
T ss_pred ccc-CCCcchhHHHhhcCC-------ceEEEecCCcccccHhhhh
Confidence 355 999999999988742 3699999999999875553
No 163
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=90.42 E-value=0.51 Score=43.05 Aligned_cols=60 Identities=22% Similarity=0.296 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCc-CCHHHHHHHHhcCCeE-EEEecCCCC-------CCcceEEeCCHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDR-TDEDAFKVLRNRGQGF-GILVSKTPK-------ETHASYSLQEPSEV 361 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~-NDe~mf~~~~~~~~G~-gVaVgna~~-------~t~A~y~l~d~~eV 361 (379)
+....+.+++.+|++.+ ++++|||+. +|+.+=+.+ |+ +|.+..... ...++|.++++.++
T Consensus 152 ~~~~~~~~~~~~~~~~~---~~~~igDs~~~di~~A~~a-----G~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPE---EAVMVGDRLDKDIKGAKNL-----GMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred CHHHHHHHHHHcCCChh---hEEEECCChHHHHHHHHHC-----CCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 45678999999999875 899999997 899877776 54 666665432 13467777777664
No 164
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=90.32 E-value=0.31 Score=43.01 Aligned_cols=15 Identities=40% Similarity=0.693 Sum_probs=12.2
Q ss_pred cEEEEEeCCCccCCC
Q 017025 122 KIVMFLDYDGTLAPI 136 (379)
Q Consensus 122 ~~liflD~DGTLl~~ 136 (379)
|.+++||+||||++.
T Consensus 1 ~~~iiFD~dgTL~~~ 15 (188)
T TIGR01489 1 KVVVVSDFDGTITLN 15 (188)
T ss_pred CeEEEEeCCCcccCC
Confidence 467889999999884
No 165
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=90.29 E-value=0.37 Score=54.47 Aligned_cols=60 Identities=22% Similarity=0.300 Sum_probs=47.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEec-CCCC--CCcceEEeCC
Q 017025 283 VLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVS-KTPK--ETHASYSLQE 357 (379)
Q Consensus 283 ~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVg-na~~--~t~A~y~l~d 357 (379)
+-.+.|. +|..-++.|.+. |. -+.++||+.||.+|++.+ ..||+|| ++.. +..|++++.+
T Consensus 649 far~sPe---~K~~iV~~lq~~-g~------vVam~GDGvNDapALk~A-----dVGIAmg~~gtdvAk~aADivL~d 711 (941)
T TIGR01517 649 LARSSPL---DKQLLVLMLKDM-GE------VVAVTGDGTNDAPALKLA-----DVGFSMGISGTEVAKEASDIILLD 711 (941)
T ss_pred EEECCHH---HHHHHHHHHHHC-CC------EEEEECCCCchHHHHHhC-----CcceecCCCccHHHHHhCCEEEec
Confidence 3466777 799999987763 32 589999999999999998 5999999 5543 4788999863
No 166
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=90.14 E-value=0.46 Score=45.83 Aligned_cols=31 Identities=10% Similarity=0.257 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHhc-CCEEEEcCCChhhHHhhc
Q 017025 147 NEMREAVRDVARY-FPTAIVTGRCRDKVFSFV 177 (379)
Q Consensus 147 ~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~ 177 (379)
|.+.+.|+.|+++ ++++|+|+.+...+...+
T Consensus 145 pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L 176 (273)
T PRK13225 145 PGVADLLAQLRSRSLCLGILSSNSRQNIEAFL 176 (273)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH
Confidence 4556666777666 577777777777666554
No 167
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=89.89 E-value=0.52 Score=43.84 Aligned_cols=68 Identities=13% Similarity=0.182 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE--EEEecCCCC--CCcceEEeCCHHHHHHHHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF--GILVSKTPK--ETHASYSLQEPSEVKDFLRRLV 369 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~--gVaVgna~~--~t~A~y~l~d~~eV~~~L~~Lv 369 (379)
+....+.+++.+|++.+ ++++|||+.+|+.+=+.+ |. .+.|.+... ...+...+.+.+++.++|+.|.
T Consensus 151 ~p~~~~~~~~~~~~~p~---~~l~igDs~~di~aA~~a-----G~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 222 (224)
T PRK14988 151 DQRLWQAVAEHTGLKAE---RTLFIDDSEPILDAAAQF-----GIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM 222 (224)
T ss_pred CHHHHHHHHHHcCCChH---HEEEEcCCHHHHHHHHHc-----CCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhhc
Confidence 46788999999999875 899999999886655554 55 355666432 2444455566777777777653
No 168
>PRK11590 hypothetical protein; Provisional
Probab=89.88 E-value=0.38 Score=44.25 Aligned_cols=44 Identities=16% Similarity=0.053 Sum_probs=30.9
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCC
Q 017025 291 KWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKT 345 (379)
Q Consensus 291 g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna 345 (379)
|-.|-..|+..+ |.+. ....+.|||.||.+||+.+ +.+++|...
T Consensus 161 g~~K~~~l~~~~---~~~~---~~~~aY~Ds~~D~pmL~~a-----~~~~~vnp~ 204 (211)
T PRK11590 161 GHEKVAQLERKI---GTPL---RLYSGYSDSKQDNPLLYFC-----QHRWRVTPR 204 (211)
T ss_pred ChHHHHHHHHHh---CCCc---ceEEEecCCcccHHHHHhC-----CCCEEECcc
Confidence 444554454444 5433 2578999999999999999 788887653
No 169
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=89.54 E-value=0.99 Score=43.72 Aligned_cols=60 Identities=22% Similarity=0.196 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCCC--CC--CcceEEeCCHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKTP--KE--THASYSLQEPSEV 361 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna~--~~--t~A~y~l~d~~eV 361 (379)
+...+..+++.+|++.+ ++++|||+.+|+.+-+.+ |+ .|+|.... .+ ..|++++.+..++
T Consensus 204 ~p~~~~~a~~~~~~~p~---~~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~l~~ad~vi~~~~~l 268 (286)
T PLN02779 204 DPDIYNLAAETLGVDPS---RCVVVEDSVIGLQAAKAA-----GMRCIVTKSSYTADEDFSGADAVFDCLGDV 268 (286)
T ss_pred CHHHHHHHHHHhCcChH---HEEEEeCCHHhHHHHHHc-----CCEEEEEccCCccccccCCCcEEECChhhc
Confidence 45688999999999875 899999999999888776 54 55554332 22 4588999888774
No 170
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=89.22 E-value=1 Score=43.07 Aligned_cols=65 Identities=11% Similarity=0.143 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCC-CCC--CcceEEeCCHHHHHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKT-PKE--THASYSLQEPSEVKDFLR 366 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna-~~~--t~A~y~l~d~~eV~~~L~ 366 (379)
+...+..+++++|+..+ .+++|||+.+|+.+=+.+ |+ .|++... +.. ..|+|++.++.++...+-
T Consensus 167 ~Pe~~~~a~~~l~~~p~---~~l~IgDs~~Di~aA~~a-----G~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~ 235 (260)
T PLN03243 167 DPEMFMYAAERLGFIPE---RCIVFGNSNSSVEAAHDG-----CMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDL 235 (260)
T ss_pred CHHHHHHHHHHhCCChH---HeEEEcCCHHHHHHHHHc-----CCEEEEEecCCchhhhccCCEEeCCHHHHHHHHH
Confidence 46788999999999875 899999999998877766 44 4455422 111 467899999998765443
No 171
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=88.66 E-value=0.49 Score=43.74 Aligned_cols=43 Identities=21% Similarity=0.112 Sum_probs=30.7
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecC
Q 017025 291 KWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSK 344 (379)
Q Consensus 291 g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgn 344 (379)
|-.|-..|+..+ |.+. ....+.|||.||.+||+.+ +++++|..
T Consensus 160 g~~Kv~rl~~~~---~~~~---~~~~aYsDS~~D~pmL~~a-----~~~~~Vnp 202 (210)
T TIGR01545 160 GHEKVAQLEQKI---GSPL---KLYSGYSDSKQDNPLLAFC-----EHRWRVSK 202 (210)
T ss_pred ChHHHHHHHHHh---CCCh---hheEEecCCcccHHHHHhC-----CCcEEECc
Confidence 445555555444 4322 3578999999999999999 78888764
No 172
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=88.61 E-value=0.29 Score=43.48 Aligned_cols=36 Identities=11% Similarity=0.009 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
-+-..++.+++.+|++.+ ++++|||+..|..+=+.+
T Consensus 143 P~p~~~~~~~~~~~~~~~---~~l~igDs~~di~aA~~a 178 (188)
T PRK10725 143 PAPDTFLRCAQLMGVQPT---QCVVFEDADFGIQAARAA 178 (188)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEeccHhhHHHHHHC
Confidence 356789999999999764 899999999998876665
No 173
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=88.51 E-value=0.73 Score=41.02 Aligned_cols=48 Identities=23% Similarity=0.385 Sum_probs=36.9
Q ss_pred EEEEEeCCCccCCCC---CCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCCh
Q 017025 123 IVMFLDYDGTLAPIV---EDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCR 170 (379)
Q Consensus 123 ~liflD~DGTLl~~~---~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~ 170 (379)
+++|+|.||||.... ..+++..+-|.+.++|++|+++ ++++|+|..+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 679999999999422 1233455667899999999988 68999987664
No 174
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=87.32 E-value=1.4 Score=41.53 Aligned_cols=60 Identities=13% Similarity=0.169 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCC-CC----CCcceEEeCCHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKT-PK----ETHASYSLQEPSE 360 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna-~~----~t~A~y~l~d~~e 360 (379)
-+...+...++++|++.+ ++++|||+..|+.+=+.+ |+ .|.+... +. +..++|++.++.+
T Consensus 165 P~p~~~~~a~~~~~~~~~---~~l~vgDs~~Di~aA~~a-----Gi~~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 165 PHPDPYLKALEVLKVSKD---HTFVFEDSVSGIKAGVAA-----GMPVVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred CChHHHHHHHHHhCCChh---HEEEEcCCHHHHHHHHHC-----CCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 356788999999999875 899999999998876665 44 4555432 11 2468899998888
No 175
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=87.18 E-value=1.4 Score=45.54 Aligned_cols=65 Identities=20% Similarity=0.224 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCCC--C--CCcceEEeCCHHHHHHHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKTP--K--ETHASYSLQEPSEVKDFLRRL 368 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna~--~--~t~A~y~l~d~~eV~~~L~~L 368 (379)
|-..+...++.++. + ++++|||+.+|+.+-+.+ |+ .|.+.... . ...++|.+.+..++.++|..+
T Consensus 387 kP~~~~~al~~l~~--~---~~v~VGDs~~Di~aAk~A-----G~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~~ 456 (459)
T PRK06698 387 KSDLVKSILNKYDI--K---EAAVVGDRLSDINAAKDN-----GLIAIGCNFDFAQEDELAQADIVIDDLLELKGILSTV 456 (459)
T ss_pred CcHHHHHHHHhcCc--c---eEEEEeCCHHHHHHHHHC-----CCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHHH
Confidence 55678888887764 2 699999999999888877 54 66664432 1 246889999999998887654
No 176
>PRK11590 hypothetical protein; Provisional
Probab=86.90 E-value=0.38 Score=44.20 Aligned_cols=15 Identities=47% Similarity=0.822 Sum_probs=13.1
Q ss_pred CcEEEEEeCCCccCC
Q 017025 121 KKIVMFLDYDGTLAP 135 (379)
Q Consensus 121 k~~liflD~DGTLl~ 135 (379)
++++++||+||||+.
T Consensus 5 ~~k~~iFD~DGTL~~ 19 (211)
T PRK11590 5 ERRVVFFDLDGTLHQ 19 (211)
T ss_pred cceEEEEecCCCCcc
Confidence 567899999999994
No 177
>PLN02645 phosphoglycolate phosphatase
Probab=86.66 E-value=1.9 Score=42.20 Aligned_cols=47 Identities=13% Similarity=0.083 Sum_probs=38.1
Q ss_pred cEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHH
Q 017025 122 KIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVF 174 (379)
Q Consensus 122 ~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~ 174 (379)
.++++||+||||+.- . .+-+...++|++|+++ .+++++|+|+.....
T Consensus 28 ~~~~~~D~DGtl~~~-----~-~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~ 75 (311)
T PLN02645 28 VETFIFDCDGVIWKG-----D-KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRA 75 (311)
T ss_pred CCEEEEeCcCCeEeC-----C-ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHH
Confidence 468999999999983 2 3457889999999998 699999999954433
No 178
>PRK11587 putative phosphatase; Provisional
Probab=86.58 E-value=0.37 Score=44.32 Aligned_cols=29 Identities=24% Similarity=0.235 Sum_probs=20.0
Q ss_pred cEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 017025 122 KIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY 159 (379)
Q Consensus 122 ~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~ 159 (379)
.+.++||+||||++.. +-..+++.++.+.
T Consensus 3 ~k~viFDlDGTL~Ds~---------~~~~~a~~~~~~~ 31 (218)
T PRK11587 3 CKGFLFDLDGTLVDSL---------PAVERAWSNWADR 31 (218)
T ss_pred CCEEEEcCCCCcCcCH---------HHHHHHHHHHHHH
Confidence 3578999999999942 2345666666555
No 179
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=86.48 E-value=0.42 Score=43.63 Aligned_cols=49 Identities=18% Similarity=0.150 Sum_probs=27.0
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCCc----CCHHHHHHHHhc-CC--eEEEEecCCC
Q 017025 296 KALEFLLEALGYANSKDVVPVYIGDDR----TDEDAFKVLRNR-GQ--GFGILVSKTP 346 (379)
Q Consensus 296 ~Al~~Lle~lg~~~~~~~~vi~~GD~~----NDe~mf~~~~~~-~~--G~gVaVgna~ 346 (379)
..++..++.+|+... ...++.+|+. -+-++|+.+-+. +. .-.+.+|...
T Consensus 110 ~~~~~~l~~~gl~~~--f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~ 165 (214)
T PRK13288 110 DTVEMGLKLTGLDEF--FDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNH 165 (214)
T ss_pred HHHHHHHHHcCChhc--eeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCH
Confidence 456778898998752 1234444442 355666554432 11 1257777765
No 180
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=86.45 E-value=0.93 Score=41.32 Aligned_cols=14 Identities=36% Similarity=0.558 Sum_probs=12.5
Q ss_pred EEEEEeCCCccCCC
Q 017025 123 IVMFLDYDGTLAPI 136 (379)
Q Consensus 123 ~liflD~DGTLl~~ 136 (379)
++++||+||||++.
T Consensus 3 ~~viFDlDGTL~ds 16 (221)
T TIGR02253 3 KAIFFDLDDTLIDT 16 (221)
T ss_pred eEEEEeCCCCCcCC
Confidence 57899999999994
No 181
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=86.43 E-value=0.52 Score=53.14 Aligned_cols=61 Identities=25% Similarity=0.367 Sum_probs=47.7
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecC-CC--CCCcceEEeCC
Q 017025 282 MVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSK-TP--KETHASYSLQE 357 (379)
Q Consensus 282 ~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgn-a~--~~t~A~y~l~d 357 (379)
-+-.+.|. +|..-++.|.++ |. .+.+.||+-||.+|++.+ ..||+|+. +. .+++|+.++.+
T Consensus 618 VfARvsP~---qK~~IV~~lq~~-g~------vVamtGDGvNDapALk~A-----DVGIamg~~Gtdaak~Aadivl~d 681 (917)
T COG0474 618 VFARVSPE---QKARIVEALQKS-GH------VVAMTGDGVNDAPALKAA-----DVGIAMGGEGTDAAKEAADIVLLD 681 (917)
T ss_pred EEEEcCHH---HHHHHHHHHHhC-CC------EEEEeCCCchhHHHHHhc-----CccEEecccHHHHHHhhcceEeec
Confidence 45567788 799999888876 43 699999999999999999 58998886 32 24677777653
No 182
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=86.41 E-value=0.45 Score=42.96 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEcCCc-CCHHHHHHH
Q 017025 295 GKALEFLLEALGYANSKDVVPVYIGDDR-TDEDAFKVL 331 (379)
Q Consensus 295 G~Al~~Lle~lg~~~~~~~~vi~~GD~~-NDe~mf~~~ 331 (379)
....+.+++.+|++.+ ++++|||+. +|+.+=+.+
T Consensus 163 ~~~~~~~~~~~~~~~~---~~~~IgD~~~~Di~~A~~a 197 (203)
T TIGR02252 163 PKIFQEALERAGISPE---EALHIGDSLRNDYQGARAA 197 (203)
T ss_pred HHHHHHHHHHcCCChh---HEEEECCCchHHHHHHHHc
Confidence 4578999999999875 899999997 898776665
No 183
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=86.29 E-value=0.37 Score=43.51 Aligned_cols=32 Identities=22% Similarity=0.197 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAF 328 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf 328 (379)
+-..+..+++.+|++.+ ++++|||+.+|+.+=
T Consensus 163 ~p~~~~~~~~~~~~~~~---~~i~vGD~~~Di~aA 194 (197)
T TIGR01548 163 NPEPLILAAKALGVEAC---HAAMVGDTVDDIITG 194 (197)
T ss_pred CHHHHHHHHHHhCcCcc---cEEEEeCCHHHHHHH
Confidence 45668889999999875 899999999988754
No 184
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=85.76 E-value=0.12 Score=47.24 Aligned_cols=59 Identities=24% Similarity=0.312 Sum_probs=38.2
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCCCCcceEEe
Q 017025 291 KWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPKETHASYSL 355 (379)
Q Consensus 291 g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~~t~A~y~l 355 (379)
+-.|+.+|..|++ ++... .++.+||+.||++|+.-.... .|||=.+-.++.+..|.|.+
T Consensus 157 sggKa~~i~~lrk--~~~~~---~~~mvGDGatDlea~~pa~af-i~~~g~~~r~~vk~nak~~~ 215 (227)
T KOG1615|consen 157 SGGKAEVIALLRK--NYNYK---TIVMVGDGATDLEAMPPADAF-IGFGGNVIREGVKANAKWYV 215 (227)
T ss_pred CCccHHHHHHHHh--CCChh---eeEEecCCccccccCCchhhh-hccCCceEcHhhHhccHHHH
Confidence 5579999999999 44432 799999999999997654322 24543333333445555443
No 185
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=85.09 E-value=0.81 Score=40.35 Aligned_cols=35 Identities=17% Similarity=0.133 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
+...++.+++.+|++.+ ++++|||+.+|+.+=+.+
T Consensus 144 ~~~~~~~~~~~~~~~~~---~~v~IgD~~~di~aA~~~ 178 (185)
T TIGR02009 144 HPETFLLAAELLGVSPN---ECVVFEDALAGVQAARAA 178 (185)
T ss_pred ChHHHHHHHHHcCCCHH---HeEEEeCcHhhHHHHHHC
Confidence 45678899999998864 899999999998877765
No 186
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=84.84 E-value=0.83 Score=40.63 Aligned_cols=35 Identities=23% Similarity=0.266 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
+-...+++++.+|+..+ ++++|||+..|+.+=+.+
T Consensus 143 ~p~~~~~~~~~~~~~~~---~~l~vgD~~~di~aA~~~ 177 (184)
T TIGR01993 143 SPQAYEKALREAGVDPE---RAIFFDDSARNIAAAKAL 177 (184)
T ss_pred CHHHHHHHHHHhCCCcc---ceEEEeCCHHHHHHHHHc
Confidence 45688999999998875 899999998887655554
No 187
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=84.70 E-value=0.66 Score=43.43 Aligned_cols=64 Identities=13% Similarity=0.157 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCC-cCCHHHHHHHHhcCCeE-EEEecCCCCC--------CcceEEeCCHHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDD-RTDEDAFKVLRNRGQGF-GILVSKTPKE--------THASYSLQEPSEVKD 363 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~-~NDe~mf~~~~~~~~G~-gVaVgna~~~--------t~A~y~l~d~~eV~~ 363 (379)
+.......++.+|++.+ ++++|||+ ..|+.+=+.+ |+ +|.+.+.... ...++.+.+-.++.+
T Consensus 165 ~p~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~A~~a-----G~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~ 236 (238)
T PRK10748 165 FSDMYHLAAEKLNVPIG---EILHVGDDLTTDVAGAIRC-----GMQACWINPENGDLMQTWDSRLLPHIEISRLASLTS 236 (238)
T ss_pred cHHHHHHHHHHcCCChh---HEEEEcCCcHHHHHHHHHC-----CCeEEEEcCCCccccccccccCCCCEEECCHHHHHh
Confidence 46678888999999875 89999999 5998776665 54 5555543211 235566777777665
Q ss_pred HH
Q 017025 364 FL 365 (379)
Q Consensus 364 ~L 365 (379)
+|
T Consensus 237 ~~ 238 (238)
T PRK10748 237 LI 238 (238)
T ss_pred hC
Confidence 43
No 188
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=84.69 E-value=0.56 Score=44.26 Aligned_cols=30 Identities=23% Similarity=0.184 Sum_probs=20.2
Q ss_pred CcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 017025 121 KKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY 159 (379)
Q Consensus 121 k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~ 159 (379)
+.++++||+||||++.. +-..++++++.+.
T Consensus 21 ~~k~viFDlDGTLiDs~---------~~~~~a~~~~~~~ 50 (248)
T PLN02770 21 PLEAVLFDVDGTLCDSD---------PLHYYAFREMLQE 50 (248)
T ss_pred ccCEEEEcCCCccCcCH---------HHHHHHHHHHHHH
Confidence 34679999999999931 2345566655544
No 189
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=84.19 E-value=1.5 Score=36.69 Aligned_cols=36 Identities=31% Similarity=0.273 Sum_probs=30.7
Q ss_pred CHHHHHHHHHHHh-CCCCCCCccEEEEcC-CcCCHHHHHHH
Q 017025 293 DKGKALEFLLEAL-GYANSKDVVPVYIGD-DRTDEDAFKVL 331 (379)
Q Consensus 293 sKG~Al~~Lle~l-g~~~~~~~~vi~~GD-~~NDe~mf~~~ 331 (379)
.|..+++.+++.+ +++.+ ++++||| ..+|+.+-+.+
T Consensus 86 P~~~~~~~~~~~~~~~~~~---~~v~IGD~~~~Di~~A~~~ 123 (132)
T TIGR01662 86 PKPGMFLEALKRFNEIDPE---ESVYVGDQDLTDLQAAKRA 123 (132)
T ss_pred CChHHHHHHHHHcCCCChh---heEEEcCCCcccHHHHHHC
Confidence 4678999999999 58875 8999999 79998887776
No 190
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=84.15 E-value=3.4 Score=37.56 Aligned_cols=73 Identities=22% Similarity=0.195 Sum_probs=48.6
Q ss_pred CCCccccHHHHHHhccC-CcEEEEEeCCCccCCCCCC----------------------------CCcccCCHHHHHHHH
Q 017025 104 HPSALSKFEEIVNASKG-KKIVMFLDYDGTLAPIVED----------------------------PDRAFMTNEMREAVR 154 (379)
Q Consensus 104 ~psal~~f~~~~~~~~~-k~~liflD~DGTLl~~~~~----------------------------pd~~~~s~~~~~aL~ 154 (379)
-|-.+=+..+|.....| +.+.+-||+|.|++-...- -|.-.++++...-|-
T Consensus 44 a~ihwiSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI 123 (237)
T COG3700 44 APIHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLI 123 (237)
T ss_pred CCeeEEEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHH
Confidence 44444477888888744 6688999999999852110 123346666655555
Q ss_pred HHHhc-C-CEEEEcCCChhhHHhh
Q 017025 155 DVARY-F-PTAIVTGRCRDKVFSF 176 (379)
Q Consensus 155 ~L~~~-~-~vaIaTGR~~~~l~~~ 176 (379)
.++.. + .++++|||+..++...
T Consensus 124 ~MHq~RGD~i~FvTGRt~gk~d~v 147 (237)
T COG3700 124 DMHQRRGDAIYFVTGRTPGKTDTV 147 (237)
T ss_pred HHHHhcCCeEEEEecCCCCccccc
Confidence 55554 5 7999999999776543
No 191
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=83.96 E-value=0.87 Score=40.17 Aligned_cols=36 Identities=22% Similarity=0.173 Sum_probs=30.4
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
-+-...+..++.++++.+ .+++|||+.+|..+-+.+
T Consensus 142 p~p~~~~~~~~~~~~~~~---~~v~vgD~~~di~aA~~a 177 (185)
T TIGR01990 142 PDPEIFLAAAEGLGVSPS---ECIGIEDAQAGIEAIKAA 177 (185)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEecCHHHHHHHHHc
Confidence 357788999999998764 899999999998877776
No 192
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=83.54 E-value=3.9 Score=37.18 Aligned_cols=65 Identities=25% Similarity=0.469 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEcCCc-CCHHHHHHHHhcCCeE-EEEecCCCCC-----CcceEEeCCHHHHHHHHHH
Q 017025 295 GKALEFLLEALGYANSKDVVPVYIGDDR-TDEDAFKVLRNRGQGF-GILVSKTPKE-----THASYSLQEPSEVKDFLRR 367 (379)
Q Consensus 295 G~Al~~Lle~lg~~~~~~~~vi~~GD~~-NDe~mf~~~~~~~~G~-gVaVgna~~~-----t~A~y~l~d~~eV~~~L~~ 367 (379)
-..-+.+++.+|++++ ++++|||+. ||+..-+.+ |+ +|.+...... ....+.+.+..++.+.+..
T Consensus 157 ~~~f~~~~~~~g~~p~---~~l~VgD~~~~di~gA~~~-----G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~ 228 (229)
T COG1011 157 PEIFEYALEKLGVPPE---EALFVGDSLENDILGARAL-----GMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLER 228 (229)
T ss_pred cHHHHHHHHHcCCCcc---eEEEECCChhhhhHHHHhc-----CcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHhh
Confidence 3567899999999865 899999977 774555554 55 6665554321 4577788888888877754
No 193
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=83.37 E-value=0.84 Score=40.05 Aligned_cols=31 Identities=10% Similarity=0.148 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHH
Q 017025 295 GKALEFLLEALGYANSKDVVPVYIGDDRTDEDAF 328 (379)
Q Consensus 295 G~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf 328 (379)
-...+.+++.+|++.+ ++++|||+..|+.+=
T Consensus 142 p~~f~~~~~~~~~~p~---~~l~vgD~~~Di~~A 172 (175)
T TIGR01493 142 PVVYELVFDTVGLPPD---RVLMVAAHQWDLIGA 172 (175)
T ss_pred HHHHHHHHHHHCCCHH---HeEeEecChhhHHHH
Confidence 5567888999999875 899999999987653
No 194
>PHA02597 30.2 hypothetical protein; Provisional
Probab=83.27 E-value=0.58 Score=42.15 Aligned_cols=60 Identities=15% Similarity=0.119 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH-HhcCCeE-EEEecCCC--CCCcceEEeCCHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL-RNRGQGF-GILVSKTP--KETHASYSLQEPSEVK 362 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~-~~~~~G~-gVaVgna~--~~t~A~y~l~d~~eV~ 362 (379)
|-..+..+++.+| +. .+++|||+.+|..+=+.+ + |+ .|.|..+. ......|.+++..|+.
T Consensus 132 kp~~~~~a~~~~~-~~----~~v~vgDs~~di~aA~~a~~----Gi~~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 132 KEKLFIKAKEKYG-DR----VVCFVDDLAHNLDAAHEALS----QLPVIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cHHHHHHHHHHhC-CC----cEEEeCCCHHHHHHHHHHHc----CCcEEEecchhhccccchhhhhccHHHHh
Confidence 5678999999999 32 699999999997665543 1 33 44554432 2234457777666653
No 195
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=83.08 E-value=0.76 Score=42.01 Aligned_cols=28 Identities=21% Similarity=0.203 Sum_probs=19.8
Q ss_pred EEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 017025 123 IVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY 159 (379)
Q Consensus 123 ~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~ 159 (379)
++++||+||||++.. +...++++++.+.
T Consensus 2 k~iiFD~DGTL~ds~---------~~~~~~~~~~~~~ 29 (220)
T TIGR03351 2 SLVVLDMAGTTVDED---------GLVYRALRQAVTA 29 (220)
T ss_pred cEEEEecCCCeeccC---------chHHHHHHHHHHH
Confidence 578999999999832 2446666666554
No 196
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=82.91 E-value=2 Score=47.62 Aligned_cols=68 Identities=19% Similarity=0.242 Sum_probs=51.5
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCC--CCcceEEe--CC
Q 017025 282 MVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPK--ETHASYSL--QE 357 (379)
Q Consensus 282 ~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~--~t~A~y~l--~d 357 (379)
-+-|+.|. +|..-++.|.+.-+ -+..+||+.||-++|..+ ..||+++.+.. -+.|++++ ++
T Consensus 765 V~aev~P~---~K~~~Ik~lq~~~~-------~VaMVGDGINDaPALA~A-----dVGIaig~gs~vAieaADIVLmrn~ 829 (951)
T KOG0207|consen 765 VYAEVLPE---QKAEKIKEIQKNGG-------PVAMVGDGINDAPALAQA-----DVGIAIGAGSDVAIEAADIVLMRND 829 (951)
T ss_pred EEeccCch---hhHHHHHHHHhcCC-------cEEEEeCCCCccHHHHhh-----ccceeeccccHHHHhhCCEEEEccc
Confidence 35688888 69888888887642 489999999999999998 58888888753 37888887 34
Q ss_pred HHHHHHH
Q 017025 358 PSEVKDF 364 (379)
Q Consensus 358 ~~eV~~~ 364 (379)
-.+|...
T Consensus 830 L~~v~~a 836 (951)
T KOG0207|consen 830 LRDVPFA 836 (951)
T ss_pred hhhhHHH
Confidence 4444443
No 197
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=81.60 E-value=0.89 Score=41.35 Aligned_cols=50 Identities=10% Similarity=-0.025 Sum_probs=26.8
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcC---CcCCHHHHHHH-Hhc-CC--eEEEEecCCC
Q 017025 296 KALEFLLEALGYANSKDVVPVYIGD---DRTDEDAFKVL-RNR-GQ--GFGILVSKTP 346 (379)
Q Consensus 296 ~Al~~Lle~lg~~~~~~~~vi~~GD---~~NDe~mf~~~-~~~-~~--G~gVaVgna~ 346 (379)
..++.+++.+|+... .+.+++.+| .-.|-++|+.+ .+. +. .-.|.||...
T Consensus 124 ~~~~~~l~~~~l~~~-fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~igD~~ 180 (224)
T TIGR02254 124 ETQYKRLRKSGLFPF-FDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLMIGDSL 180 (224)
T ss_pred HHHHHHHHHCCcHhh-cCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheEEECCCc
Confidence 345677888887642 224444444 23677776654 332 21 2257777653
No 198
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=81.40 E-value=6.5 Score=38.25 Aligned_cols=79 Identities=14% Similarity=0.102 Sum_probs=49.7
Q ss_pred hhhhhhhhcCCCccccHHHHHHhccCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhhH
Q 017025 95 EEQTSWIARHPSALSKFEEIVNASKGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYF-PTAIVTGRCRDKV 173 (379)
Q Consensus 95 ~~~~~w~~~~psal~~f~~~~~~~~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~-~vaIaTGR~~~~l 173 (379)
.-+..|..+.-+-.... +.-...-..+-+|+||+|.||.....+ ..--.+.+.+.|.+|++.+ .+++=|-.+.+-+
T Consensus 96 ~~L~EW~v~~~~ev~~l-~~~~~~~~~phVIVfDlD~TLItd~~~--v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV 172 (297)
T PF05152_consen 96 NFLKEWYVQDYSEVYQL-KEESLVWEPPHVIVFDLDSTLITDEGD--VRIRDPAVYDSLRELKEQGCVLVLWSYGNREHV 172 (297)
T ss_pred HHHHHHhcCChhhhhhh-hhhhccCCCCcEEEEECCCcccccCCc--cccCChHHHHHHHHHHHcCCEEEEecCCCHHHH
Confidence 44677876522211110 111123556678999999999985431 2234678889999999996 5666677777766
Q ss_pred Hhh
Q 017025 174 FSF 176 (379)
Q Consensus 174 ~~~ 176 (379)
..-
T Consensus 173 ~~s 175 (297)
T PF05152_consen 173 RHS 175 (297)
T ss_pred HHH
Confidence 654
No 199
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=81.38 E-value=1.2 Score=42.65 Aligned_cols=29 Identities=28% Similarity=0.371 Sum_probs=20.9
Q ss_pred cEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 017025 122 KIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY 159 (379)
Q Consensus 122 ~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~ 159 (379)
.++++||+||||++.. +...+++.++.+.
T Consensus 13 ~k~viFDlDGTL~Ds~---------~~~~~a~~~~~~~ 41 (272)
T PRK13223 13 PRLVMFDLDGTLVDSV---------PDLAAAVDRMLLE 41 (272)
T ss_pred CCEEEEcCCCccccCH---------HHHHHHHHHHHHH
Confidence 3589999999999942 2356677766655
No 200
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=81.22 E-value=0.89 Score=42.73 Aligned_cols=50 Identities=10% Similarity=-0.059 Sum_probs=27.3
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCCc----CCHHHHHH-HHhcCC---eEEEEecCCC
Q 017025 296 KALEFLLEALGYANSKDVVPVYIGDDR----TDEDAFKV-LRNRGQ---GFGILVSKTP 346 (379)
Q Consensus 296 ~Al~~Lle~lg~~~~~~~~vi~~GD~~----NDe~mf~~-~~~~~~---G~gVaVgna~ 346 (379)
..++.+++++|+...- ...++.+|+. -|-++|.. +.+.+. .-.+.||..+
T Consensus 127 ~~~~~~l~~~gl~~~f-~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~ 184 (253)
T TIGR01422 127 EMMDVVAPEAALQGYR-PDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTV 184 (253)
T ss_pred HHHHHHHHHHHhcCCC-CceEEccccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcH
Confidence 3567788888876421 1244455542 36667654 343321 1257788765
No 201
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=81.12 E-value=0.77 Score=42.69 Aligned_cols=13 Identities=46% Similarity=0.621 Sum_probs=12.0
Q ss_pred EEEEEeCCCccCC
Q 017025 123 IVMFLDYDGTLAP 135 (379)
Q Consensus 123 ~liflD~DGTLl~ 135 (379)
++++||+||||++
T Consensus 11 k~vIFDlDGTL~d 23 (224)
T PRK14988 11 DTVLLDMDGTLLD 23 (224)
T ss_pred CEEEEcCCCCccc
Confidence 5799999999999
No 202
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=81.11 E-value=1.3 Score=39.13 Aligned_cols=28 Identities=18% Similarity=0.247 Sum_probs=20.1
Q ss_pred EEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcC
Q 017025 124 VMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYF 160 (379)
Q Consensus 124 liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~ 160 (379)
+++||+||||++.. +-...+++++.+.+
T Consensus 1 ~iiFD~DGTL~ds~---------~~~~~~~~~~~~~~ 28 (185)
T TIGR01990 1 AVIFDLDGVITDTA---------EYHYLAWKALADEL 28 (185)
T ss_pred CeEEcCCCccccCh---------HHHHHHHHHHHHHc
Confidence 37899999999832 34566777776663
No 203
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=81.10 E-value=0.9 Score=44.02 Aligned_cols=18 Identities=22% Similarity=0.383 Sum_probs=14.4
Q ss_pred cCCcEEEEEeCCCccCCC
Q 017025 119 KGKKIVMFLDYDGTLAPI 136 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~ 136 (379)
..+-++|+||+||||++.
T Consensus 37 ~~~~k~VIFDlDGTLvDS 54 (286)
T PLN02779 37 SALPEALLFDCDGVLVET 54 (286)
T ss_pred ccCCcEEEEeCceeEEcc
Confidence 334568999999999994
No 204
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=81.08 E-value=1.9 Score=45.02 Aligned_cols=57 Identities=26% Similarity=0.372 Sum_probs=43.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCCCCcceEEeCC
Q 017025 283 VLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPKETHASYSLQE 357 (379)
Q Consensus 283 ~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~~t~A~y~l~d 357 (379)
+-+..|. +|...++.+.+. | ..+.++||+.||.+|++.+ .+||+|+ .+..|++++-+
T Consensus 387 ~~~~~p~---~K~~~v~~l~~~-g------~~v~~vGDg~nD~~al~~A-----dvgia~~---a~~~adivl~~ 443 (499)
T TIGR01494 387 FARVTPE---EKAALVEALQKK-G------RVVAMTGDGVNDAPALKKA-----DVGIAMG---AKAAADIVLLD 443 (499)
T ss_pred eeccCHH---HHHHHHHHHHHC-C------CEEEEECCChhhHHHHHhC-----CCccccc---hHHhCCeEEec
Confidence 3456666 788888887543 3 2699999999999999987 6888887 35668888753
No 205
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=80.90 E-value=1.6 Score=37.59 Aligned_cols=36 Identities=25% Similarity=0.207 Sum_probs=29.6
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
-|...++.+++.+|++.+ ++++|||+..|+.+-+.+
T Consensus 102 P~~~~~~~~~~~~~~~~~---e~i~IGDs~~Di~~A~~~ 137 (147)
T TIGR01656 102 PKPGLILEALKRLGVDAS---RSLVVGDRLRDLQAARNA 137 (147)
T ss_pred CCHHHHHHHHHHcCCChH---HEEEEcCCHHHHHHHHHC
Confidence 467789999999998875 899999998887766554
No 206
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=80.61 E-value=4 Score=38.09 Aligned_cols=15 Identities=27% Similarity=0.204 Sum_probs=13.1
Q ss_pred cEEEEEeCCCccCCC
Q 017025 122 KIVMFLDYDGTLAPI 136 (379)
Q Consensus 122 ~~liflD~DGTLl~~ 136 (379)
.++|+||+||||++.
T Consensus 10 ~k~iiFDlDGTL~D~ 24 (238)
T PRK10748 10 ISALTFDLDDTLYDN 24 (238)
T ss_pred ceeEEEcCcccccCC
Confidence 468999999999994
No 207
>PLN02940 riboflavin kinase
Probab=80.37 E-value=2.8 Score=42.37 Aligned_cols=61 Identities=20% Similarity=0.085 Sum_probs=45.9
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCCCC----CCcceEEeCCHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKTPK----ETHASYSLQEPSEV 361 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna~~----~t~A~y~l~d~~eV 361 (379)
-+...+...++.+|++.+ ++++|||+.+|+.+=+.+ |+ .|.+..... ...+++.+.+..++
T Consensus 151 P~p~~~~~a~~~lgv~p~---~~l~VGDs~~Di~aA~~a-----Gi~~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 151 PSPDIFLEAAKRLNVEPS---NCLVIEDSLPGVMAGKAA-----GMEVIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred CCHHHHHHHHHHcCCChh---HEEEEeCCHHHHHHHHHc-----CCEEEEECCCCcchhhccCccEEeCCHhHc
Confidence 356789999999999875 899999999998877766 54 566654331 25677888887775
No 208
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=80.29 E-value=1.2 Score=38.14 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKV 330 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~ 330 (379)
.+...+..+++++|++. .+++|||+..|..+=+.
T Consensus 119 p~~~~~~~~~~~~~~~~----~~l~iGDs~~Di~aa~~ 152 (154)
T TIGR01549 119 PEPEIFLAALESLGLPP----EVLHVGDNLNDIEGARN 152 (154)
T ss_pred cCHHHHHHHHHHcCCCC----CEEEEeCCHHHHHHHHH
Confidence 36788999999999864 69999999999776554
No 209
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=80.12 E-value=1.8 Score=41.34 Aligned_cols=49 Identities=24% Similarity=0.320 Sum_probs=27.2
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCCc----CCHHHHHHHHhc-C--CeEEEEecCCC
Q 017025 296 KALEFLLEALGYANSKDVVPVYIGDDR----TDEDAFKVLRNR-G--QGFGILVSKTP 346 (379)
Q Consensus 296 ~Al~~Lle~lg~~~~~~~~vi~~GD~~----NDe~mf~~~~~~-~--~G~gVaVgna~ 346 (379)
.-++.+++++|+... ...+..||+. -|-++|..+-++ + -.-.+.+|...
T Consensus 137 ~~~~~~l~~~gl~~~--Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~ 192 (260)
T PLN03243 137 RYLERAIEAVGMEGF--FSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSN 192 (260)
T ss_pred HHHHHHHHHcCCHhh--CcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCH
Confidence 456777888887642 2345555543 366776554332 1 12256677653
No 210
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=79.36 E-value=2.4 Score=36.67 Aligned_cols=48 Identities=13% Similarity=0.144 Sum_probs=41.1
Q ss_pred EEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhcc
Q 017025 125 MFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 125 iflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~~vaIaTGR~~~~l~~~~~ 178 (379)
.+.++++|+.. .+.+-+++.+.|++|.+...++|+||-....+.++..
T Consensus 17 ~~~~v~~tiat------gGklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae 64 (152)
T COG4087 17 KAGKVLYTIAT------GGKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAE 64 (152)
T ss_pred ecceEEEEEcc------CcEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHH
Confidence 35689999988 4578889999999999999999999999988877653
No 211
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=79.28 E-value=0.87 Score=42.31 Aligned_cols=28 Identities=25% Similarity=0.331 Sum_probs=19.7
Q ss_pred EEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 017025 123 IVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY 159 (379)
Q Consensus 123 ~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~ 159 (379)
+.++||+||||++.. +...++++.+.+.
T Consensus 13 k~viFD~DGTL~Ds~---------~~~~~a~~~~~~~ 40 (229)
T PRK13226 13 RAVLFDLDGTLLDSA---------PDMLATVNAMLAA 40 (229)
T ss_pred CEEEEcCcCccccCH---------HHHHHHHHHHHHH
Confidence 478999999999942 2345666666555
No 212
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=79.24 E-value=1.2 Score=41.19 Aligned_cols=16 Identities=44% Similarity=0.721 Sum_probs=13.5
Q ss_pred CcEEEEEeCCCccCCC
Q 017025 121 KKIVMFLDYDGTLAPI 136 (379)
Q Consensus 121 k~~liflD~DGTLl~~ 136 (379)
.+++.+||+||||+..
T Consensus 4 ~~~la~FDfDgTLt~~ 19 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQ 19 (210)
T ss_pred cCcEEEEcCCCCCccC
Confidence 4678889999999983
No 213
>PRK10444 UMP phosphatase; Provisional
Probab=79.18 E-value=5.6 Score=37.75 Aligned_cols=61 Identities=20% Similarity=0.147 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCc-CCHHHHHHHHhcCCeE-EEEecCCCC--------CCcceEEeCCHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDR-TDEDAFKVLRNRGQGF-GILVSKTPK--------ETHASYSLQEPSEV 361 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~-NDe~mf~~~~~~~~G~-gVaVgna~~--------~t~A~y~l~d~~eV 361 (379)
-+...++.+++.++++.+ ++++|||+. +|+.+=+.+ |+ +|.|..+.- +...+|++++..++
T Consensus 175 P~~~~~~~~~~~~~~~~~---~~v~IGD~~~tDi~~A~~~-----G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 175 PSPWIIRAALNKMQAHSE---ETVIVGDNLRTDILAGFQA-----GLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred CCHHHHHHHHHHcCCCcc---cEEEECCCcHHHHHHHHHc-----CCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 356778899999998765 899999996 898877776 44 777755421 13567888887765
No 214
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=79.02 E-value=1.4 Score=40.35 Aligned_cols=36 Identities=8% Similarity=-0.006 Sum_probs=30.7
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
-+...+...++.+|++.+ ++++|||+.+|+.+=+.+
T Consensus 143 P~p~~~~~a~~~~~~~p~---~~l~igDs~~di~aA~~a 178 (221)
T PRK10563 143 PDPALMFHAAEAMNVNVE---NCILVDDSSAGAQSGIAA 178 (221)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEeCcHhhHHHHHHC
Confidence 357889999999999875 899999999998876665
No 215
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=78.59 E-value=1.6 Score=48.02 Aligned_cols=59 Identities=24% Similarity=0.254 Sum_probs=46.3
Q ss_pred EEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEec-CCC--CCCcceEEeCC
Q 017025 284 LEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVS-KTP--KETHASYSLQE 357 (379)
Q Consensus 284 lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVg-na~--~~t~A~y~l~d 357 (379)
--+.|+ .|-+-++.|.+.- +.+..-||+.||-+++|.+ ..||+|| ++. .|++++-+|.|
T Consensus 659 aR~~P~---HK~kIVeaLq~~g-------eivAMTGDGVNDApALK~A-----dIGIAMG~~GTdVaKeAsDMVL~D 720 (972)
T KOG0202|consen 659 ARAEPQ---HKLKIVEALQSRG-------EVVAMTGDGVNDAPALKKA-----DIGIAMGISGTDVAKEASDMVLAD 720 (972)
T ss_pred EecCch---hHHHHHHHHHhcC-------CEEEecCCCccchhhhhhc-----ccceeecCCccHhhHhhhhcEEec
Confidence 344577 7999998877742 2577789999999999998 6999999 554 36888888854
No 216
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=78.40 E-value=1.4 Score=40.38 Aligned_cols=15 Identities=40% Similarity=0.567 Sum_probs=12.8
Q ss_pred cEEEEEeCCCccCCC
Q 017025 122 KIVMFLDYDGTLAPI 136 (379)
Q Consensus 122 ~~liflD~DGTLl~~ 136 (379)
.++++||+||||++.
T Consensus 4 ~~~viFD~DGTL~d~ 18 (221)
T PRK10563 4 IEAVFFDCDGTLVDS 18 (221)
T ss_pred CCEEEECCCCCCCCC
Confidence 467899999999983
No 217
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=78.11 E-value=1.3 Score=40.88 Aligned_cols=49 Identities=31% Similarity=0.521 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEc-CCc----CCHHH-HHHHHhcCCe--EEEEecCCC
Q 017025 295 GKALEFLLEALGYANSKDVVPVYIG-DDR----TDEDA-FKVLRNRGQG--FGILVSKTP 346 (379)
Q Consensus 295 G~Al~~Lle~lg~~~~~~~~vi~~G-D~~----NDe~m-f~~~~~~~~G--~gVaVgna~ 346 (379)
...++.+++.+|+... +...+| |+. =|-.+ +..+...+.. -.+.||-..
T Consensus 116 ~~~~~~~l~~~gl~~~---F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~ 172 (220)
T COG0546 116 ERELDILLKALGLADY---FDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSL 172 (220)
T ss_pred HHHHHHHHHHhCCccc---cceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCH
Confidence 3567889999999864 544555 533 14444 4444443322 237777654
No 218
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=77.89 E-value=1.2 Score=42.27 Aligned_cols=15 Identities=20% Similarity=0.388 Sum_probs=13.2
Q ss_pred cEEEEEeCCCccCCC
Q 017025 122 KIVMFLDYDGTLAPI 136 (379)
Q Consensus 122 ~~liflD~DGTLl~~ 136 (379)
.++|+||+||||++.
T Consensus 4 ~k~vIFDlDGTLiDs 18 (267)
T PRK13478 4 IQAVIFDWAGTTVDF 18 (267)
T ss_pred eEEEEEcCCCCeecC
Confidence 468999999999994
No 219
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=77.66 E-value=3.5 Score=39.23 Aligned_cols=44 Identities=27% Similarity=0.265 Sum_probs=34.6
Q ss_pred Cchhhhhhhhc-CCCccccHHHHHHhccCCcEEEEEeCCCccCCC
Q 017025 93 QTEEQTSWIAR-HPSALSKFEEIVNASKGKKIVMFLDYDGTLAPI 136 (379)
Q Consensus 93 ~~~~~~~w~~~-~psal~~f~~~~~~~~~k~~liflD~DGTLl~~ 136 (379)
++.++++...+ +-+|=..|+.-+...++|+++|++|+|-|+++.
T Consensus 49 ~s~E~~AL~~Q~yn~Ak~~~d~~~k~~k~K~~aVvlDlDETvLdN 93 (274)
T COG2503 49 QSAEYQALYLQAYNSAKIALDTQAKKKKGKKKAVVLDLDETVLDN 93 (274)
T ss_pred hhHHHHHHHHHHhhhHHHHHHhhhccccCCCceEEEecchHhhcC
Confidence 35666665554 667777888777777899999999999999984
No 220
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=77.53 E-value=6 Score=41.20 Aligned_cols=71 Identities=14% Similarity=0.141 Sum_probs=49.1
Q ss_pred HHHHHHhc-cCCcEEEEEeCCCccCCCCCCCC---c--------ccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhc
Q 017025 111 FEEIVNAS-KGKKIVMFLDYDGTLAPIVEDPD---R--------AFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFV 177 (379)
Q Consensus 111 f~~~~~~~-~~k~~liflD~DGTLl~~~~~pd---~--------~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~ 177 (379)
...++.+. ...++.+++|+|+||..-+=..| . +..-.+..+.|..|.++ +.++|||=.....+.+.+
T Consensus 210 i~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF 289 (574)
T COG3882 210 IASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVF 289 (574)
T ss_pred HHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHH
Confidence 33455554 55678999999999996221111 1 22335667888888888 589999999999888876
Q ss_pred c-ccC
Q 017025 178 K-LAG 181 (379)
Q Consensus 178 ~-l~~ 181 (379)
. .|.
T Consensus 290 ~khp~ 294 (574)
T COG3882 290 RKHPD 294 (574)
T ss_pred hhCCC
Confidence 4 454
No 221
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=77.51 E-value=3.1 Score=39.40 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=25.3
Q ss_pred cCCHHHHHHHHHHHh--c-CCEEEEcCCChhhHHhhcc
Q 017025 144 FMTNEMREAVRDVAR--Y-FPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 144 ~~s~~~~~aL~~L~~--~-~~vaIaTGR~~~~l~~~~~ 178 (379)
.+.+.|.++|+.+++ . +.++|+|--.--.+..+++
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~ 108 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILE 108 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHH
Confidence 356677888888854 2 5788888888777777663
No 222
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=77.49 E-value=3.1 Score=39.91 Aligned_cols=43 Identities=21% Similarity=0.200 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEcCC-cCCHHHHHHHHhcCCeE-EEEecCC
Q 017025 295 GKALEFLLEALGYANSKDVVPVYIGDD-RTDEDAFKVLRNRGQGF-GILVSKT 345 (379)
Q Consensus 295 G~Al~~Lle~lg~~~~~~~~vi~~GD~-~NDe~mf~~~~~~~~G~-gVaVgna 345 (379)
...++.+++++|++.+ ++++|||+ .+|+.+=+.+ |+ +|.|..+
T Consensus 205 p~~~~~~~~~~~~~~~---~~lmIGD~~~tDI~~A~~a-----Gi~si~V~~G 249 (279)
T TIGR01452 205 PYMFECITENFSIDPA---RTLMVGDRLETDILFGHRC-----GMTTVLVLSG 249 (279)
T ss_pred HHHHHHHHHHhCCChh---hEEEECCChHHHHHHHHHc-----CCcEEEECCC
Confidence 4567888999998875 89999999 5998876665 54 6666543
No 223
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=77.35 E-value=1.8 Score=38.34 Aligned_cols=48 Identities=19% Similarity=0.293 Sum_probs=34.5
Q ss_pred cEEEEEeCCCccCCCCC------CCCcccCCHHHHHHHHHHHhc-CCEEEEcCCC
Q 017025 122 KIVMFLDYDGTLAPIVE------DPDRAFMTNEMREAVRDVARY-FPTAIVTGRC 169 (379)
Q Consensus 122 ~~liflD~DGTLl~~~~------~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~ 169 (379)
++++|||.||||..... .++...+-+.+.++|++|+++ .+++|+|-.+
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~ 55 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQD 55 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCc
Confidence 36799999999987321 112234557789999999988 6888888643
No 224
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=77.22 E-value=3 Score=41.15 Aligned_cols=42 Identities=19% Similarity=0.179 Sum_probs=33.9
Q ss_pred cCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-----CCEEEEc
Q 017025 119 KGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-----FPTAIVT 166 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-----~~vaIaT 166 (379)
..+..-++||+||.|.. ...+-++..+|+++|.++ +|+++.|
T Consensus 32 s~~~fgfafDIDGVL~R------G~~~i~~~~~Alr~L~~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 32 SPPTFGFAFDIDGVLFR------GHRPIPGALKALRRLVDNQGQLKIPFVFLT 78 (389)
T ss_pred CCCceeEEEecccEEEe------cCCCCcchHHHHHHHHhcCCCeeccEEEEe
Confidence 44567899999999998 346778899999999987 3777776
No 225
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=76.85 E-value=2.1 Score=37.62 Aligned_cols=28 Identities=18% Similarity=0.250 Sum_probs=19.8
Q ss_pred EEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 017025 123 IVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY 159 (379)
Q Consensus 123 ~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~ 159 (379)
++++||+||||++.. +...+++.++.+.
T Consensus 2 ~~iiFD~DGTL~ds~---------~~~~~~~~~~~~~ 29 (185)
T TIGR02009 2 KAVIFDMDGVIVDTA---------PLHAQAWKHLADK 29 (185)
T ss_pred CeEEEcCCCcccCCh---------HHHHHHHHHHHHH
Confidence 578999999999942 2445666666655
No 226
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=76.66 E-value=2.2 Score=36.46 Aligned_cols=36 Identities=28% Similarity=0.348 Sum_probs=31.1
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
.+..+.+.+++.+|+.++ .+++|||+..|+.+-+.+
T Consensus 134 p~~~~~~~~~~~~~~~p~---~~~~vgD~~~d~~~A~~~ 169 (176)
T PF13419_consen 134 PDPDAYRRALEKLGIPPE---EILFVGDSPSDVEAAKEA 169 (176)
T ss_dssp TSHHHHHHHHHHHTSSGG---GEEEEESSHHHHHHHHHT
T ss_pred hHHHHHHHHHHHcCCCcc---eEEEEeCCHHHHHHHHHc
Confidence 456889999999999875 899999999998877766
No 227
>PRK09449 dUMP phosphatase; Provisional
Probab=76.44 E-value=1.4 Score=40.41 Aligned_cols=49 Identities=16% Similarity=0.219 Sum_probs=26.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCC----cCCHHHHHHH-HhcCC---eEEEEecCCC
Q 017025 296 KALEFLLEALGYANSKDVVPVYIGDD----RTDEDAFKVL-RNRGQ---GFGILVSKTP 346 (379)
Q Consensus 296 ~Al~~Lle~lg~~~~~~~~vi~~GD~----~NDe~mf~~~-~~~~~---G~gVaVgna~ 346 (379)
..++..++++|+... ...++.+|+ --|.++|..+ ++.|. .-.+.||...
T Consensus 122 ~~~~~~l~~~~l~~~--fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~ 178 (224)
T PRK09449 122 ELQQVRLERTGLRDY--FDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLMVGDNL 178 (224)
T ss_pred HHHHHHHHhCChHHH--cCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEEEcCCc
Confidence 345667888887642 234455554 3577787654 33331 1356676653
No 228
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=76.11 E-value=1.4 Score=40.07 Aligned_cols=14 Identities=36% Similarity=0.449 Sum_probs=12.4
Q ss_pred cEEEEEeCCCccCC
Q 017025 122 KIVMFLDYDGTLAP 135 (379)
Q Consensus 122 ~~liflD~DGTLl~ 135 (379)
-++++||+||||++
T Consensus 6 ~~~iiFD~DGTL~d 19 (226)
T PRK13222 6 IRAVAFDLDGTLVD 19 (226)
T ss_pred CcEEEEcCCccccc
Confidence 45899999999997
No 229
>PLN02811 hydrolase
Probab=75.30 E-value=4 Score=37.49 Aligned_cols=59 Identities=12% Similarity=0.050 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHhC---CCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCCCC--C--CcceEEeCCHHH
Q 017025 294 KGKALEFLLEALG---YANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKTPK--E--THASYSLQEPSE 360 (379)
Q Consensus 294 KG~Al~~Lle~lg---~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna~~--~--t~A~y~l~d~~e 360 (379)
+-......++.+| +..+ ++++|||+..|+.+=+.+ |+ .|.|..... . ..+++++.+..+
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~---~~v~IgDs~~di~aA~~a-----G~~~i~v~~~~~~~~~~~~~d~vi~~~~e 205 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPG---KVLVFEDAPSGVEAAKNA-----GMSVVMVPDPRLDKSYCKGADQVLSSLLD 205 (220)
T ss_pred CcHHHHHHHHHhCCCCCCcc---ceEEEeccHhhHHHHHHC-----CCeEEEEeCCCCcHhhhhchhhHhcCHhh
Confidence 4567888888886 7764 899999999998877766 44 666654321 1 234455555544
No 230
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=75.24 E-value=5.2 Score=36.91 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=28.4
Q ss_pred ccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhh
Q 017025 143 AFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSF 176 (379)
Q Consensus 143 ~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~ 176 (379)
-.+++..++.+.+|++. ..++++||--+..+...
T Consensus 87 ~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~V 121 (227)
T KOG1615|consen 87 PTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPV 121 (227)
T ss_pred CccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHH
Confidence 45888999999999999 58999999888766554
No 231
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=75.23 E-value=1.6 Score=39.24 Aligned_cols=43 Identities=23% Similarity=0.376 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecC
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSK 344 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgn 344 (379)
+....+.+++.+|++++ ++++|||+.+|+.+-+.+ |+ +|.+..
T Consensus 150 ~~~~~~~~~~~~~~~p~---~~~~vgD~~~Di~~A~~~-----G~~~i~v~r 193 (198)
T TIGR01428 150 APQVYQLALEALGVPPD---EVLFVASNPWDLGGAKKF-----GFKTAWVNR 193 (198)
T ss_pred CHHHHHHHHHHhCCChh---hEEEEeCCHHHHHHHHHC-----CCcEEEecC
Confidence 36678999999999875 899999999998877665 55 555543
No 232
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=74.72 E-value=3.8 Score=36.95 Aligned_cols=35 Identities=20% Similarity=0.443 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
+....+.+++.+|++++ ++++|||+..|+.+=+.+
T Consensus 143 ~p~~~~~~~~~~~~~p~---~~l~vgD~~~di~aA~~a 177 (199)
T PRK09456 143 EARIYQHVLQAEGFSAA---DAVFFDDNADNIEAANAL 177 (199)
T ss_pred CHHHHHHHHHHcCCChh---HeEEeCCCHHHHHHHHHc
Confidence 57778999999999875 899999998886655554
No 233
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=74.69 E-value=4.8 Score=36.05 Aligned_cols=35 Identities=14% Similarity=0.261 Sum_probs=21.0
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCC----cCCHHHHHHHH
Q 017025 296 KALEFLLEALGYANSKDVVPVYIGDD----RTDEDAFKVLR 332 (379)
Q Consensus 296 ~Al~~Lle~lg~~~~~~~~vi~~GD~----~NDe~mf~~~~ 332 (379)
..++.+++.+|+... ...++.+|+ --|-++|+.+-
T Consensus 120 ~~~~~~l~~~gl~~~--fd~i~~s~~~~~~KP~~~~~~~~~ 158 (198)
T TIGR01428 120 AMLKSLVKHAGLDDP--FDAVLSADAVRAYKPAPQVYQLAL 158 (198)
T ss_pred HHHHHHHHHCCChhh--hheeEehhhcCCCCCCHHHHHHHH
Confidence 346777888887532 233444443 24788887654
No 234
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=73.94 E-value=1.8 Score=40.16 Aligned_cols=33 Identities=21% Similarity=0.133 Sum_probs=26.8
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 296 KALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 296 ~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
..-..-++.||++++ ++++|.|+.+.+.+-+.+
T Consensus 146 d~yL~Aa~~Lgv~P~---~CvviEDs~~Gi~Aa~aA 178 (221)
T COG0637 146 DIYLLAAERLGVDPE---ECVVVEDSPAGIQAAKAA 178 (221)
T ss_pred HHHHHHHHHcCCChH---HeEEEecchhHHHHHHHC
Confidence 445666778888875 899999999999888877
No 235
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=73.48 E-value=4.5 Score=34.15 Aligned_cols=35 Identities=11% Similarity=0.162 Sum_probs=29.7
Q ss_pred CHHHHHHHHHHHhC--CCCCCCccEEEEcCCcCCHHHHHH
Q 017025 293 DKGKALEFLLEALG--YANSKDVVPVYIGDDRTDEDAFKV 330 (379)
Q Consensus 293 sKG~Al~~Lle~lg--~~~~~~~~vi~~GD~~NDe~mf~~ 330 (379)
.|...+..+++.+| +..+ ++++|||+..|.+-++.
T Consensus 90 pkp~~~~~a~~~lg~~~~p~---~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 90 PKSPRLVEIALKLNGVLKPK---SILFVDDRPDNNEEVDY 126 (128)
T ss_pred cHHHHHHHHHHHhcCCCCcc---eEEEECCCHhHHHHHHh
Confidence 57889999999999 8875 89999999998766553
No 236
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=73.31 E-value=4.1 Score=36.14 Aligned_cols=45 Identities=24% Similarity=0.187 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCc-CCHHHHHHHHhcCCeE-EEEecCC
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDR-TDEDAFKVLRNRGQGF-GILVSKT 345 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~-NDe~mf~~~~~~~~G~-gVaVgna 345 (379)
-+...+..+++.+|++.+ ++++|||+. +|+.+=+.+ |+ +|.+...
T Consensus 92 P~p~~~~~~l~~~~~~~~---~~l~IGDs~~~Di~aA~~a-----Gi~~i~v~~g 138 (170)
T TIGR01668 92 PPGCAFRRAHPEMGLTSE---QVAVVGDRLFTDVMGGNRN-----GSYTILVEPL 138 (170)
T ss_pred CChHHHHHHHHHcCCCHH---HEEEECCcchHHHHHHHHc-----CCeEEEEccC
Confidence 467789999999999865 899999998 798766665 44 6666544
No 237
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=72.33 E-value=2.1 Score=38.80 Aligned_cols=54 Identities=20% Similarity=0.301 Sum_probs=39.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCCCCCCcceEEeCCHHHHHHHHHHHH
Q 017025 295 GKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKTPKETHASYSLQEPSEVKDFLRRLV 369 (379)
Q Consensus 295 G~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna~~~t~A~y~l~d~~eV~~~L~~Lv 369 (379)
....+.+++.+|++++ ++++|||+..|+.+=+.+ |+ +|. +.++.+..+-|.+++
T Consensus 155 p~~~~~~~~~~g~~~~---~~l~i~D~~~di~aA~~a-----G~~~i~-------------v~~~~~~~~~l~~~~ 209 (211)
T TIGR02247 155 PRIYQLMLERLGVAPE---ECVFLDDLGSNLKPAAAL-----GITTIK-------------VSDEEQAIHDLEKAT 209 (211)
T ss_pred HHHHHHHHHHcCCCHH---HeEEEcCCHHHHHHHHHc-----CCEEEE-------------ECCHHHHHHHHHHHh
Confidence 5578899999999875 899999999998877665 44 444 345566666666654
No 238
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=72.16 E-value=4.8 Score=35.08 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 295 GKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 295 G~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
....+.+++.+|++.+ ++++|||+..|+.+-+.+
T Consensus 143 ~~~~~~~~~~~~~~~~---~~~~vgD~~~di~aA~~~ 176 (183)
T TIGR01509 143 PDIYLLALKKLGLKPE---ECLFVDDSPAGIEAAKAA 176 (183)
T ss_pred HHHHHHHHHHcCCCcc---eEEEEcCCHHHHHHHHHc
Confidence 6778999999999865 899999999988776665
No 239
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=71.78 E-value=7 Score=43.27 Aligned_cols=38 Identities=21% Similarity=0.272 Sum_probs=31.2
Q ss_pred cEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCC---CCCcceEEeC
Q 017025 314 VPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTP---KETHASYSLQ 356 (379)
Q Consensus 314 ~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~---~~t~A~y~l~ 356 (379)
-+-..||+.||-++++.+ ..|||||=+. -|.+|+-+|-
T Consensus 707 iVaVTGDGVNDsPALKKA-----DIGVAMGiaGSDvsKqAADmILL 747 (1019)
T KOG0203|consen 707 IVAVTGDGVNDSPALKKA-----DIGVAMGIAGSDVSKQAADMILL 747 (1019)
T ss_pred EEEEeCCCcCCChhhccc-----ccceeeccccchHHHhhcceEEe
Confidence 467889999999999998 6999998764 2578888763
No 240
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=71.66 E-value=2.1 Score=37.81 Aligned_cols=11 Identities=45% Similarity=0.972 Sum_probs=10.2
Q ss_pred EEEeCCCccCC
Q 017025 125 MFLDYDGTLAP 135 (379)
Q Consensus 125 iflD~DGTLl~ 135 (379)
++||+||||+.
T Consensus 1 v~fD~DGTL~~ 11 (192)
T PF12710_consen 1 VIFDFDGTLTD 11 (192)
T ss_dssp EEEESBTTTBS
T ss_pred eEEecCcCeec
Confidence 58999999999
No 241
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=71.12 E-value=2.1 Score=44.25 Aligned_cols=14 Identities=36% Similarity=0.553 Sum_probs=12.4
Q ss_pred EEEEEeCCCccCCC
Q 017025 123 IVMFLDYDGTLAPI 136 (379)
Q Consensus 123 ~liflD~DGTLl~~ 136 (379)
+.++||+||||++.
T Consensus 242 k~vIFDlDGTLiDs 255 (459)
T PRK06698 242 QALIFDMDGTLFQT 255 (459)
T ss_pred hheeEccCCceecc
Confidence 57899999999994
No 242
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=70.72 E-value=10 Score=37.19 Aligned_cols=36 Identities=17% Similarity=0.326 Sum_probs=31.6
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
.|...++.+++.+|+..+ .+++|||+..|..+-+..
T Consensus 87 pk~~~i~~~~~~l~i~~~---~~vfidD~~~d~~~~~~~ 122 (320)
T TIGR01686 87 PKSESLRKIAKKLNLGTD---SFLFIDDNPAERANVKIT 122 (320)
T ss_pred chHHHHHHHHHHhCCCcC---cEEEECCCHHHHHHHHHH
Confidence 799999999999999875 899999999888876663
No 243
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=70.46 E-value=4.7 Score=35.64 Aligned_cols=30 Identities=27% Similarity=0.326 Sum_probs=20.8
Q ss_pred CcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 017025 121 KKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY 159 (379)
Q Consensus 121 k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~ 159 (379)
+.++++||+||||++.. +...++++++.+.
T Consensus 4 ~~~~viFD~DGTLiDs~---------~~~~~a~~~~~~~ 33 (188)
T PRK10725 4 RYAGLIFDMDGTILDTE---------PTHRKAWREVLGR 33 (188)
T ss_pred cceEEEEcCCCcCccCH---------HHHHHHHHHHHHH
Confidence 34689999999999931 2345666666554
No 244
>PLN02940 riboflavin kinase
Probab=70.43 E-value=3.7 Score=41.54 Aligned_cols=16 Identities=38% Similarity=0.393 Sum_probs=13.4
Q ss_pred CcEEEEEeCCCccCCC
Q 017025 121 KKIVMFLDYDGTLAPI 136 (379)
Q Consensus 121 k~~liflD~DGTLl~~ 136 (379)
+-++++||+||||++.
T Consensus 10 ~ik~VIFDlDGTLvDt 25 (382)
T PLN02940 10 LVSHVILDLDGTLLNT 25 (382)
T ss_pred cCCEEEECCcCcCCcC
Confidence 3567999999999983
No 245
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=70.08 E-value=4.1 Score=38.29 Aligned_cols=83 Identities=20% Similarity=0.297 Sum_probs=52.3
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHh---CCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCC--C--------
Q 017025 280 GRMVLEIRPTIKWDKGKALEFLLEAL---GYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKT--P-------- 346 (379)
Q Consensus 280 g~~~lEI~P~~g~sKG~Al~~Lle~l---g~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna--~-------- 346 (379)
..+.-...|+ +.-||..+..+..+. |+.. +..+|+||+.||.--...++ +.-++|-.- +
T Consensus 151 ~~hsC~~CPs-NmCKg~Vl~~~~~s~~~~gv~y---er~iYvGDG~nD~CP~l~Lr----~~D~ampRkgfpl~k~~~~~ 222 (256)
T KOG3120|consen 151 TQHSCNLCPS-NMCKGLVLDELVASQLKDGVRY---ERLIYVGDGANDFCPVLRLR----ACDVAMPRKGFPLWKLISAN 222 (256)
T ss_pred CCCccCcCch-hhhhhHHHHHHHHHHhhcCCce---eeEEEEcCCCCCcCcchhcc----cCceecccCCCchHhhhhcC
Confidence 3455566889 899999999998876 3332 37999999999986655554 233333321 1
Q ss_pred -CCCcceEEe-CCHHHHHHHHHHHHH
Q 017025 347 -KETHASYSL-QEPSEVKDFLRRLVQ 370 (379)
Q Consensus 347 -~~t~A~y~l-~d~~eV~~~L~~Lv~ 370 (379)
.+-.|+-.. .+-.++...|..++.
T Consensus 223 p~~~kasV~~W~sg~d~~~~L~~lik 248 (256)
T KOG3120|consen 223 PMLLKASVLEWSSGEDLERILQQLIK 248 (256)
T ss_pred cceeeeeEEecccHHHHHHHHHHHHH
Confidence 111222222 466677777777665
No 246
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=69.90 E-value=2.7 Score=48.13 Aligned_cols=50 Identities=24% Similarity=0.323 Sum_probs=35.1
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEE
Q 017025 282 MVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGIL 341 (379)
Q Consensus 282 ~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVa 341 (379)
-++-.|-. ---|+.-++-+.+..+. .+++|||+.||..|.+.+. -|.||.
T Consensus 771 sViCCR~s-PlQKA~Vv~lVk~~~~~------~TLAIGDGANDVsMIQ~Ah---VGVGIs 820 (1151)
T KOG0206|consen 771 SVICCRVS-PLQKALVVKLVKKGLKA------VTLAIGDGANDVSMIQEAH---VGVGIS 820 (1151)
T ss_pred EEEEccCC-HHHHHHHHHHHHhcCCc------eEEEeeCCCccchheeeCC---cCeeec
Confidence 34445533 33688888888555443 6999999999999999873 256654
No 247
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=68.61 E-value=2 Score=37.49 Aligned_cols=12 Identities=33% Similarity=0.703 Sum_probs=10.7
Q ss_pred EEEeCCCccCCC
Q 017025 125 MFLDYDGTLAPI 136 (379)
Q Consensus 125 iflD~DGTLl~~ 136 (379)
++||+||||++.
T Consensus 2 vlFDlDgtLv~~ 13 (183)
T TIGR01509 2 ILFDLDGVLVDT 13 (183)
T ss_pred eeeccCCceech
Confidence 789999999993
No 248
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=67.99 E-value=18 Score=34.48 Aligned_cols=51 Identities=22% Similarity=0.477 Sum_probs=36.1
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHH-HHHHhcCCeE-EEEecC
Q 017025 291 KWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAF-KVLRNRGQGF-GILVSK 344 (379)
Q Consensus 291 g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf-~~~~~~~~G~-gVaVgn 344 (379)
|.+||.+|..+++.+|..++ .+|+|-|+.-.+.-+ +++...+-.| |+.=..
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk---~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~ 212 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPK---KIIFIDDNKENLKSVEKACKKSGIDFIGFHYTG 212 (252)
T ss_pred CCccHHHHHHHHHHcCCCCC---eEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcc
Confidence 78999999999999998875 799999987555444 3343333222 555443
No 249
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=67.14 E-value=3.5 Score=31.01 Aligned_cols=27 Identities=26% Similarity=0.492 Sum_probs=23.6
Q ss_pred HHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHH
Q 017025 297 ALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKV 330 (379)
Q Consensus 297 Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~ 330 (379)
-++.||+.+|+ ++||||-.-|++|++.
T Consensus 6 DVqQlLK~~G~-------ivyfg~r~~~iemm~~ 32 (68)
T COG4483 6 DVQQLLKKFGI-------IVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHHCCe-------eeecCCHHHHHHHHHH
Confidence 47889999984 9999999999999865
No 250
>PRK08238 hypothetical protein; Validated
Probab=66.96 E-value=5.1 Score=41.93 Aligned_cols=41 Identities=29% Similarity=0.382 Sum_probs=30.7
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCC
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTP 346 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~ 346 (379)
.|... +.+.++-. ..+++||+.+|++|++.+ |.+++|+..+
T Consensus 128 ~K~~~---l~~~l~~~-----~~~yvGDS~~Dlp~~~~A-----~~av~Vn~~~ 168 (479)
T PRK08238 128 AKAAA---LVEAFGER-----GFDYAGNSAADLPVWAAA-----RRAIVVGASP 168 (479)
T ss_pred hHHHH---HHHHhCcc-----CeeEecCCHHHHHHHHhC-----CCeEEECCCH
Confidence 45544 44655532 478899999999999998 7888888764
No 251
>PHA02597 30.2 hypothetical protein; Provisional
Probab=66.28 E-value=8.1 Score=34.59 Aligned_cols=14 Identities=29% Similarity=0.404 Sum_probs=12.3
Q ss_pred EEEEEeCCCccCCC
Q 017025 123 IVMFLDYDGTLAPI 136 (379)
Q Consensus 123 ~liflD~DGTLl~~ 136 (379)
++++||+||||++.
T Consensus 3 k~viFDlDGTLiD~ 16 (197)
T PHA02597 3 PTILTDVDGVLLSW 16 (197)
T ss_pred cEEEEecCCceEch
Confidence 57899999999994
No 252
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=66.06 E-value=3.8 Score=37.26 Aligned_cols=49 Identities=18% Similarity=0.154 Sum_probs=28.8
Q ss_pred HHHHHHHHhCCCCCCCccEEEEcCCc---CCHHHHHHHHhc-C--CeEEEEecCCC
Q 017025 297 ALEFLLEALGYANSKDVVPVYIGDDR---TDEDAFKVLRNR-G--QGFGILVSKTP 346 (379)
Q Consensus 297 Al~~Lle~lg~~~~~~~~vi~~GD~~---NDe~mf~~~~~~-~--~G~gVaVgna~ 346 (379)
..+..++.+|+... .+.+++.++-. =|..+|+.+-+. | -.-.+.||...
T Consensus 127 ~~~~~l~~~gl~~~-Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~VgD~~ 181 (229)
T COG1011 127 HQERKLRQLGLLDY-FDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFVGDSL 181 (229)
T ss_pred HHHHHHHHcCChhh-hheEEEecccccCCCCcHHHHHHHHHcCCCcceEEEECCCh
Confidence 34667777776542 23566666643 389999887653 1 12356666643
No 253
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=65.62 E-value=6.9 Score=37.13 Aligned_cols=43 Identities=33% Similarity=0.445 Sum_probs=34.8
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCCc-CCHHHHHHHHhcCCeE-EEEecCCC
Q 017025 296 KALEFLLEALGYANSKDVVPVYIGDDR-TDEDAFKVLRNRGQGF-GILVSKTP 346 (379)
Q Consensus 296 ~Al~~Lle~lg~~~~~~~~vi~~GD~~-NDe~mf~~~~~~~~G~-gVaVgna~ 346 (379)
.--+..|+++|..++ +++.+||+. ||...=+.+ |+ +++|.|..
T Consensus 172 ~If~~al~~l~v~Pe---e~vhIgD~l~nD~~gA~~~-----G~~ailv~~~~ 216 (237)
T KOG3085|consen 172 RIFQLALERLGVKPE---ECVHIGDLLENDYEGARNL-----GWHAILVDNSI 216 (237)
T ss_pred HHHHHHHHHhCCChH---HeEEecCccccccHhHHHc-----CCEEEEEcccc
Confidence 456888999999875 899999976 898877776 55 99999764
No 254
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=65.52 E-value=12 Score=37.63 Aligned_cols=43 Identities=26% Similarity=0.232 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEec
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVS 343 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVg 343 (379)
-|-..+..+++.+++..+ ++++|||+.+|+.+=+.+ |+ .|.+.
T Consensus 105 P~p~~l~~a~~~l~v~~~---~svmIGDs~sDi~aAk~a-----Gi~~I~v~ 148 (354)
T PRK05446 105 PKTGLVEEYLAEGAIDLA---NSYVIGDRETDVQLAENM-----GIKGIRYA 148 (354)
T ss_pred CCHHHHHHHHHHcCCCcc---cEEEEcCCHHHHHHHHHC-----CCeEEEEE
Confidence 456688888899998775 899999999998876665 54 55553
No 255
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=65.50 E-value=4.9 Score=36.14 Aligned_cols=27 Identities=30% Similarity=0.511 Sum_probs=18.8
Q ss_pred EEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 017025 124 VMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY 159 (379)
Q Consensus 124 liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~ 159 (379)
+++||+||||++.. +...+++.++.+.
T Consensus 2 ~viFD~DGTLiDs~---------~~~~~a~~~~~~~ 28 (197)
T TIGR01548 2 ALVLDMDGVMADVS---------QSYRRAIIDTVEH 28 (197)
T ss_pred ceEEecCceEEech---------HHHHHHHHHHHHH
Confidence 47899999999942 2345666666555
No 256
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=65.12 E-value=14 Score=33.46 Aligned_cols=13 Identities=31% Similarity=0.756 Sum_probs=11.9
Q ss_pred EEEEEeCCCccCC
Q 017025 123 IVMFLDYDGTLAP 135 (379)
Q Consensus 123 ~liflD~DGTLl~ 135 (379)
+.++||+||||++
T Consensus 3 k~viFDldGtL~d 15 (211)
T TIGR02247 3 KAVIFDFGGVLLP 15 (211)
T ss_pred eEEEEecCCceec
Confidence 4799999999999
No 257
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=64.88 E-value=6.5 Score=33.54 Aligned_cols=28 Identities=29% Similarity=0.461 Sum_probs=19.2
Q ss_pred EEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcC
Q 017025 124 VMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYF 160 (379)
Q Consensus 124 liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~ 160 (379)
+++||+||||++.. +....++.++.+.+
T Consensus 1 ~iifD~DGTL~d~~---------~~~~~~~~~~~~~~ 28 (154)
T TIGR01549 1 AILFDIDGTLVDSS---------FAIRRAFEETLEEF 28 (154)
T ss_pred CeEecCCCcccccH---------HHHHHHHHHHHHHh
Confidence 37899999999931 34556666666553
No 258
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=63.44 E-value=4.5 Score=36.14 Aligned_cols=49 Identities=12% Similarity=0.165 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcC--CcCCHHHHHHHHhcC--CeEEEEecCC
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGD--DRTDEDAFKVLRNRG--QGFGILVSKT 345 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD--~~NDe~mf~~~~~~~--~G~gVaVgna 345 (379)
|.-..+..+++.+|+.. ..++.+. ...+.-+++.++..+ .+.-+.||.+
T Consensus 152 D~~~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg 204 (215)
T PF00702_consen 152 DNESTASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDG 204 (215)
T ss_dssp SEHHHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESS
T ss_pred ccccccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEEEEccC
Confidence 34455688889999963 3455555 666663344454432 1345556644
No 259
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=63.40 E-value=7.6 Score=36.45 Aligned_cols=74 Identities=19% Similarity=0.317 Sum_probs=50.5
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCCCCCCcceEEeCCHHH
Q 017025 282 MVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKTPKETHASYSLQEPSE 360 (379)
Q Consensus 282 ~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna~~~t~A~y~l~d~~e 360 (379)
+-+=..|. -.|.++..+..|++.. ..+++|-||.+-+..=+.+ |+ ++.|+.......++|.+.+...
T Consensus 155 ~~~vcKP~-----~~afE~a~k~agi~~p--~~t~FfDDS~~NI~~ak~v-----Gl~tvlv~~~~~~~~~d~~l~~ih~ 222 (244)
T KOG3109|consen 155 KTVVCKPS-----EEAFEKAMKVAGIDSP--RNTYFFDDSERNIQTAKEV-----GLKTVLVGREHKIKGVDYALEQIHN 222 (244)
T ss_pred CceeecCC-----HHHHHHHHHHhCCCCc--CceEEEcCchhhHHHHHhc-----cceeEEEEeeecccchHHHHHHhhc
Confidence 33444455 4688999999999832 4899999998887655554 54 8888887666677777765554
Q ss_pred HHHHHHH
Q 017025 361 VKDFLRR 367 (379)
Q Consensus 361 V~~~L~~ 367 (379)
..+.+-.
T Consensus 223 ~k~a~p~ 229 (244)
T KOG3109|consen 223 NKEALPE 229 (244)
T ss_pred hhhhchH
Confidence 4444433
No 260
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=62.10 E-value=10 Score=39.81 Aligned_cols=42 Identities=29% Similarity=0.346 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCC
Q 017025 292 WDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKT 345 (379)
Q Consensus 292 ~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna 345 (379)
-.|-.+++ +.+|.+.. .++.||+.+|.+||+.+ +.+++|...
T Consensus 175 e~Kv~rl~---~~~g~~~~----~~aYgDS~sD~plL~~a-----~e~y~V~~~ 216 (497)
T PLN02177 175 DHKRDAVL---KEFGDALP----DLGLGDRETDHDFMSIC-----KEGYMVPRT 216 (497)
T ss_pred HHHHHHHH---HHhCCCCc----eEEEECCccHHHHHHhC-----CccEEeCCC
Confidence 34666665 56664432 38999999999999998 678888773
No 261
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=61.80 E-value=4.7 Score=36.37 Aligned_cols=48 Identities=6% Similarity=0.274 Sum_probs=26.6
Q ss_pred cCCHHHHHHHHh-cCC--eEEEEecCCCCC-------CcceEEeCCHHHHHHHHHHHH
Q 017025 322 RTDEDAFKVLRN-RGQ--GFGILVSKTPKE-------THASYSLQEPSEVKDFLRRLV 369 (379)
Q Consensus 322 ~NDe~mf~~~~~-~~~--G~gVaVgna~~~-------t~A~y~l~d~~eV~~~L~~Lv 369 (379)
--|-++|+.+-+ .|. .-.+.|+..+.. -.....+.++..+.+.|+.++
T Consensus 141 KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l~~~~ 198 (199)
T PRK09456 141 KPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDKQTIPDYFAKVL 198 (199)
T ss_pred CCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCCccHHHHHHhcc
Confidence 357888876533 211 235677765422 112234567777777777654
No 262
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=61.67 E-value=26 Score=34.42 Aligned_cols=46 Identities=22% Similarity=0.200 Sum_probs=34.6
Q ss_pred EEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-----CCEEEEc---CCChhhHHh
Q 017025 124 VMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-----FPTAIVT---GRCRDKVFS 175 (379)
Q Consensus 124 liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-----~~vaIaT---GR~~~~l~~ 175 (379)
.++||+||||... ..+-+...++|+.|.+. .++.++| |++...+..
T Consensus 2 ~~ifD~DGvL~~g------~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~ 55 (321)
T TIGR01456 2 GFAFDIDGVLFRG------KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAE 55 (321)
T ss_pred EEEEeCcCceECC------ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHH
Confidence 5889999999983 34578999999999984 4676665 677665433
No 263
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=58.44 E-value=10 Score=33.99 Aligned_cols=14 Identities=29% Similarity=0.396 Sum_probs=12.1
Q ss_pred EEEEEeCCCccCCC
Q 017025 123 IVMFLDYDGTLAPI 136 (379)
Q Consensus 123 ~liflD~DGTLl~~ 136 (379)
++|+||+||||++.
T Consensus 1 k~viFDlDGTL~d~ 14 (203)
T TIGR02252 1 KLITFDAVGTLLAL 14 (203)
T ss_pred CeEEEecCCceeee
Confidence 36899999999994
No 264
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=57.74 E-value=25 Score=33.20 Aligned_cols=19 Identities=21% Similarity=0.454 Sum_probs=16.0
Q ss_pred cCCcEEEEEeCCCccCCCC
Q 017025 119 KGKKIVMFLDYDGTLAPIV 137 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~ 137 (379)
...++|++||+|-|+.+-.
T Consensus 10 ~~~ril~~FDFD~TIid~d 28 (256)
T KOG3120|consen 10 SSPRILLVFDFDRTIIDQD 28 (256)
T ss_pred cCCcEEEEEecCceeecCC
Confidence 4578999999999999743
No 265
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=57.35 E-value=12 Score=33.02 Aligned_cols=37 Identities=11% Similarity=0.046 Sum_probs=22.1
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCC-------cCCHHHHHHHHh
Q 017025 296 KALEFLLEALGYANSKDVVPVYIGDD-------RTDEDAFKVLRN 333 (379)
Q Consensus 296 ~Al~~Lle~lg~~~~~~~~vi~~GD~-------~NDe~mf~~~~~ 333 (379)
..++.+++.+|+... .+.+++..|. --|.++|+.+-+
T Consensus 109 ~~~~~~l~~~gl~~~-fd~i~~~~~~~~~~~~~KP~p~~~~~~~~ 152 (184)
T TIGR01993 109 AHARRALNRLGIEDC-FDGIFCFDTANPDYLLPKPSPQAYEKALR 152 (184)
T ss_pred HHHHHHHHHcCcHhh-hCeEEEeecccCccCCCCCCHHHHHHHHH
Confidence 356788899888642 2245555443 237778876543
No 266
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=54.10 E-value=4.3 Score=30.32 Aligned_cols=27 Identities=26% Similarity=0.537 Sum_probs=17.6
Q ss_pred HHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHH
Q 017025 297 ALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKV 330 (379)
Q Consensus 297 Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~ 330 (379)
=|+.|++++|+ +||+||-.-|++|++.
T Consensus 6 DVqQLLK~fG~-------~IY~gdr~~DielM~~ 32 (62)
T PF06014_consen 6 DVQQLLKKFGI-------IIYVGDRLWDIELMEI 32 (62)
T ss_dssp HHHHHHHTTS------------S-HHHHHHHHHH
T ss_pred HHHHHHHHCCE-------EEEeCChHHHHHHHHH
Confidence 36889999884 8999999999999754
No 267
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=53.57 E-value=12 Score=32.60 Aligned_cols=27 Identities=26% Similarity=0.373 Sum_probs=18.0
Q ss_pred EEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 017025 124 VMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY 159 (379)
Q Consensus 124 liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~ 159 (379)
+|+||+||||++.. +-..++++++.+.
T Consensus 1 ~viFD~DGTL~D~~---------~~~~~~~~~~~~~ 27 (175)
T TIGR01493 1 AMVFDVYGTLVDVH---------GGVRACLAAIAPE 27 (175)
T ss_pred CeEEecCCcCcccH---------HHHHHHHHHhhhh
Confidence 37899999999941 2345566655443
No 268
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=53.37 E-value=26 Score=32.96 Aligned_cols=45 Identities=27% Similarity=0.398 Sum_probs=30.9
Q ss_pred EEcCCCC-CHHHHHHHHHHHhCCCCCCCccEEEEcCCcC--CHHHHHHHHhc
Q 017025 286 IRPTIKW-DKGKALEFLLEALGYANSKDVVPVYIGDDRT--DEDAFKVLRNR 334 (379)
Q Consensus 286 I~P~~g~-sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~N--De~mf~~~~~~ 334 (379)
..|. ++ ..-.||++|-+++.-.. +-++||+|+.| |++.|+.+++.
T Consensus 72 ~~~r-g~~qRn~AL~~ir~~~~~~~---~GVVyFADDdN~Ysl~lF~emR~i 119 (223)
T cd00218 72 LKPR-GVEQRNLALRWIREHLSAKL---DGVVYFADDDNTYDLELFEEMRKI 119 (223)
T ss_pred CCcc-cHHHHHHHHHHHHhccccCc---ceEEEEccCCCcccHHHHHHHhcc
Confidence 3444 33 34477888887764222 36999999998 88889998863
No 269
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=52.86 E-value=7.7 Score=34.91 Aligned_cols=13 Identities=38% Similarity=0.641 Sum_probs=10.3
Q ss_pred EE-EEEeCCCccCC
Q 017025 123 IV-MFLDYDGTLAP 135 (379)
Q Consensus 123 ~l-iflD~DGTLl~ 135 (379)
++ |++|+||||++
T Consensus 2 ~i~I~iDiDgVLad 15 (191)
T PF06941_consen 2 KIRIAIDIDGVLAD 15 (191)
T ss_dssp -EEEEEESBTTTB-
T ss_pred CcEEEEECCCCCcc
Confidence 45 99999999998
No 270
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=52.53 E-value=22 Score=38.44 Aligned_cols=77 Identities=14% Similarity=0.133 Sum_probs=48.6
Q ss_pred cCCcEEEEEeCCCccCCCCCCCCcccC--------CHHHHHHHHHHHhc-CCEEEEcCCChhhHHh---hcc-ccCceEE
Q 017025 119 KGKKIVMFLDYDGTLAPIVEDPDRAFM--------TNEMREAVRDVARY-FPTAIVTGRCRDKVFS---FVK-LAGLYYA 185 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~~~pd~~~~--------s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~---~~~-l~~l~li 185 (379)
+-.-++|++|+|||++.... -...| +..+-....++.++ ..++.+|.|....... ++. +...+.+
T Consensus 527 kWn~kIVISDIDGTITKSDv--LGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~ 604 (738)
T KOG2116|consen 527 KWNDKIVISDIDGTITKSDV--LGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKK 604 (738)
T ss_pred ecCCcEEEecCCCceEhhhh--hhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCcc
Confidence 44457899999999997321 01111 12345555667777 5899999999876543 442 3334456
Q ss_pred ecCCceEecCCC
Q 017025 186 GSHGMDIEGPSK 197 (379)
Q Consensus 186 ~~nGa~I~~~~~ 197 (379)
--.|=+|..|++
T Consensus 605 LPdGPViLSPd~ 616 (738)
T KOG2116|consen 605 LPDGPVILSPDS 616 (738)
T ss_pred CCCCCEEeCCCc
Confidence 667777777765
No 271
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=51.62 E-value=14 Score=34.44 Aligned_cols=36 Identities=14% Similarity=0.157 Sum_probs=29.7
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
.+......+++++|++.+ ++++|||+..|+.+=+.+
T Consensus 153 P~p~~y~~i~~~lgv~p~---e~lfVgDs~~Di~AA~~A 188 (220)
T TIGR01691 153 TEAQSYVKIAGQLGSPPR---EILFLSDIINELDAARKA 188 (220)
T ss_pred CCHHHHHHHHHHhCcChh---HEEEEeCCHHHHHHHHHc
Confidence 356678999999999875 899999999888776665
No 272
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=50.91 E-value=25 Score=31.68 Aligned_cols=44 Identities=27% Similarity=0.243 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCc-CCHHHHHHHHhcCCeEEEEecC
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDR-TDEDAFKVLRNRGQGFGILVSK 344 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~-NDe~mf~~~~~~~~G~gVaVgn 344 (379)
=+.|+++.++.++++.+ +++.+||.. +|+=.=. +..-++|.|..
T Consensus 95 ~~~~fr~Al~~m~l~~~---~vvmVGDqL~TDVlggn----r~G~~tIlV~P 139 (175)
T COG2179 95 FGRAFRRALKEMNLPPE---EVVMVGDQLFTDVLGGN----RAGMRTILVEP 139 (175)
T ss_pred cHHHHHHHHHHcCCChh---HEEEEcchhhhhhhccc----ccCcEEEEEEE
Confidence 47899999999999986 899999975 5642211 11235888875
No 273
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=50.59 E-value=8.6 Score=33.20 Aligned_cols=30 Identities=20% Similarity=-0.010 Sum_probs=23.8
Q ss_pred HHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHH
Q 017025 298 LEFLLEALGYANSKDVVPVYIGDDRTDEDAFKV 330 (379)
Q Consensus 298 l~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~ 330 (379)
....++.+|.+.+ ++++|||+.+|..+.+.
T Consensus 104 ~~k~l~~l~~~p~---~~i~i~Ds~~~~~aa~~ 133 (148)
T smart00577 104 YVKDLSLLGRDLS---NVIIIDDSPDSWPFHPE 133 (148)
T ss_pred EeecHHHcCCChh---cEEEEECCHHHhhcCcc
Confidence 5666788888775 89999999999876543
No 274
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=50.10 E-value=14 Score=37.51 Aligned_cols=48 Identities=23% Similarity=0.378 Sum_probs=33.5
Q ss_pred cCCcEEEEEeCCCccCCCCC------CC-CcccCCHHHHHHHHHHHhc-CCEEEEc
Q 017025 119 KGKKIVMFLDYDGTLAPIVE------DP-DRAFMTNEMREAVRDVARY-FPTAIVT 166 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~~------~p-d~~~~s~~~~~aL~~L~~~-~~vaIaT 166 (379)
++..+++.|||||||..... +| |-..+.++.-..|+.|.+. +.++|.|
T Consensus 72 ~~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~ift 127 (422)
T KOG2134|consen 72 NGGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFT 127 (422)
T ss_pred CCCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccCCeEEEEEe
Confidence 67778899999999997432 11 2334556777788888887 5666654
No 275
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=49.67 E-value=19 Score=36.00 Aligned_cols=46 Identities=22% Similarity=0.396 Sum_probs=39.5
Q ss_pred cCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEc
Q 017025 119 KGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVT 166 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~~vaIaT 166 (379)
..+.+||+=|+||.=.+-++||-...|.+....|.++|..+ |++.|
T Consensus 5 ~~~nlLiVQDLDGVCmpLVkDPltR~ld~~Yv~A~~~l~~~--F~VLT 50 (389)
T TIGR02399 5 NTENLLIVQDLDGVCIPLVKDPLTRKLDSKYVFAVKNLEKE--FYVLT 50 (389)
T ss_pred CCCCeEEEecCCccchhhccCcccccCCHHHHHHHHHhcCc--EEEEe
Confidence 56789999999999999999999999999999998888755 44555
No 276
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=49.60 E-value=24 Score=40.61 Aligned_cols=60 Identities=20% Similarity=0.168 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeE-EEEecCCCC-----CCcceEEeCCHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGF-GILVSKTPK-----ETHASYSLQEPSEV 361 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~-gVaVgna~~-----~t~A~y~l~d~~eV 361 (379)
+......+++.+|+..+ ++++|||+.+|+.+=+.+ |+ .|.+..... ...+++++++..++
T Consensus 220 ~Pe~~~~a~~~lgv~p~---e~v~IgDs~~Di~AA~~a-----Gm~~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 220 APDIFLAAAKILGVPTS---ECVVIEDALAGVQAARAA-----GMRCIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CHHHHHHHHHHcCcCcc---cEEEEcCCHHHHHHHHHc-----CCEEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 46778899999999875 899999999997766665 44 666665421 24678899998885
No 277
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=48.61 E-value=29 Score=31.21 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=23.7
Q ss_pred CHHHHHHHHHHHh------CCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 293 DKGKALEFLLEAL------GYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 293 sKG~Al~~Lle~l------g~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
.|.+-...+++.+ |++.+ ++++|||+..|+.+-+.+
T Consensus 108 ~~~kp~~~i~~~~~~~~~~gl~p~---e~l~VgDs~~di~aA~~a 149 (174)
T TIGR01685 108 NKAKQLEMILQKVNKVDPSVLKPA---QILFFDDRTDNVREVWGY 149 (174)
T ss_pred chHHHHHHHHHHhhhcccCCCCHH---HeEEEcChhHhHHHHHHh
Confidence 3444444444443 57664 899999999998775554
No 278
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=48.10 E-value=8.8 Score=44.12 Aligned_cols=14 Identities=29% Similarity=0.513 Sum_probs=12.3
Q ss_pred EEEEEeCCCccCCC
Q 017025 123 IVMFLDYDGTLAPI 136 (379)
Q Consensus 123 ~liflD~DGTLl~~ 136 (379)
+.++||+||||++.
T Consensus 76 kaVIFDlDGTLiDS 89 (1057)
T PLN02919 76 SAVLFDMDGVLCNS 89 (1057)
T ss_pred CEEEECCCCCeEeC
Confidence 56999999999983
No 279
>TIGR00735 hisF imidazoleglycerol phosphate synthase, cyclase subunit.
Probab=46.72 E-value=66 Score=30.43 Aligned_cols=62 Identities=16% Similarity=0.097 Sum_probs=38.2
Q ss_pred cHHHHHHhccCCcEEEEEeC-CCccCCC----CC-CCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChh
Q 017025 110 KFEEIVNASKGKKIVMFLDY-DGTLAPI----VE-DPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRD 171 (379)
Q Consensus 110 ~f~~~~~~~~~k~~liflD~-DGTLl~~----~~-~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~ 171 (379)
.++++.+.+.+.++++.+|+ ||.+.+. +. +.-...-..+..+.++++.+. ...+++|++..+
T Consensus 112 ~~~~~~~~~~~~~iv~slD~~~g~~~~~~~~~v~i~gw~~~~~~~~~~~~~~l~~~G~~~iivt~i~~~ 180 (254)
T TIGR00735 112 LIYELADRFGSQCIVVAIDAKRVYVNSYCWYEVYIYGGRESTGLDAVEWAKEVEKLGAGEILLTSMDKD 180 (254)
T ss_pred HHHHHHHHcCCCCEEEEEEeccCCCCCCccEEEEEeCCcccCCCCHHHHHHHHHHcCCCEEEEeCcCcc
Confidence 55667766744678889995 5654320 00 000112244567888888888 588889998874
No 280
>PF03360 Glyco_transf_43: Glycosyltransferase family 43; InterPro: IPR005027 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 43 GT43 from CAZY comprises enzymes with only one known activities; beta-glucuronyltransferase(2.4.1 from EC);.; GO: 0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, 0016020 membrane; PDB: 2D0J_B 3CU0_A 1FGG_B 1KWS_B 1V84_B 1V83_B 1V82_A.
Probab=44.17 E-value=28 Score=32.39 Aligned_cols=44 Identities=23% Similarity=0.319 Sum_probs=23.6
Q ss_pred EcCCCCC-HHHHHHHHHHHhCCCCCCCccEEEEcCCcC--CHHHHHHHHhc
Q 017025 287 RPTIKWD-KGKALEFLLEALGYANSKDVVPVYIGDDRT--DEDAFKVLRNR 334 (379)
Q Consensus 287 ~P~~g~s-KG~Al~~Lle~lg~~~~~~~~vi~~GD~~N--De~mf~~~~~~ 334 (379)
.|. |+. .-.||++|-...... .+-++||+|+.| |++.|+.++..
T Consensus 55 ~~r-g~~qRn~AL~~ir~~~~~~---~~GVVyFaDDdNtYdl~LF~emR~~ 101 (207)
T PF03360_consen 55 KPR-GVHQRNAALRWIRNNANHR---LDGVVYFADDDNTYDLRLFDEMRKT 101 (207)
T ss_dssp --T-SHHHHHHHHHHHHSTTTSS---S-EEEEE--TTSEE-HHHHHHHCT-
T ss_pred ccc-cHHHHHHHHHHHHhcccCC---CCcEEEECCCCCeeeHHHHHHHHhh
Confidence 355 553 344566655222222 236999999998 99999998764
No 281
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=44.16 E-value=53 Score=32.46 Aligned_cols=77 Identities=25% Similarity=0.342 Sum_probs=48.1
Q ss_pred CccccHH---HHHHhccCCcEEEEEe----CCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCE-----------EEEc
Q 017025 106 SALSKFE---EIVNASKGKKIVMFLD----YDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPT-----------AIVT 166 (379)
Q Consensus 106 sal~~f~---~~~~~~~~k~~liflD----~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~v-----------aIaT 166 (379)
-.++.|+ +..++.+-+.+++++| +||-+.| ++-|.+|+++ +.+ .=.|
T Consensus 175 ~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP--------------l~ei~~La~kYgaLlfiDecHaTgf~G~t 240 (417)
T KOG1359|consen 175 RHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP--------------LEEISQLAKKYGALLFIDECHATGFFGET 240 (417)
T ss_pred ccchhHHHHHHHHHhhhheEEEEEecceeccCCCccc--------------HHHHHHHHHhcCcEEEEeecccceeecCC
Confidence 3444554 3333457788999876 7777766 5677888776 322 2248
Q ss_pred CCChhhHHhhcccc-------CceEEecCCceEecCC
Q 017025 167 GRCRDKVFSFVKLA-------GLYYAGSHGMDIEGPS 196 (379)
Q Consensus 167 GR~~~~l~~~~~l~-------~l~li~~nGa~I~~~~ 196 (379)
||..++.....+.. .-.+-|.+|.++..|.
T Consensus 241 GrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~ 277 (417)
T KOG1359|consen 241 GRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPK 277 (417)
T ss_pred CCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCCh
Confidence 99988766644321 1235668888887763
No 282
>COG4996 Predicted phosphatase [General function prediction only]
Probab=43.89 E-value=39 Score=29.35 Aligned_cols=55 Identities=15% Similarity=0.096 Sum_probs=34.8
Q ss_pred EEEEEeCCCccCCCCCC-----CC--------------cccCCHHHHHHHHHHHhcC-CEEEEcCCChhhHHhhc
Q 017025 123 IVMFLDYDGTLAPIVED-----PD--------------RAFMTNEMREAVRDVARYF-PTAIVTGRCRDKVFSFV 177 (379)
Q Consensus 123 ~liflD~DGTLl~~~~~-----pd--------------~~~~s~~~~~aL~~L~~~~-~vaIaTGR~~~~l~~~~ 177 (379)
++++||.||||.++-+= |- ...+-+.+++.++.++..+ .+..+|=.-.++..+.+
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aL 75 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKAL 75 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHH
Confidence 36899999999985321 00 1123456777787777774 56677766666655543
No 283
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=43.79 E-value=24 Score=33.82 Aligned_cols=37 Identities=11% Similarity=-0.014 Sum_probs=27.8
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
.....+...++.++.+.. ..+++|||+.+|..+-+.+
T Consensus 252 p~p~~~~~~l~~~~~~~~--~~~~~vgD~~~d~~~a~~~ 288 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKY--DVLLAVDDRDQVVDMWRRI 288 (300)
T ss_pred CcHHHHHHHHHHHhccCc--eEEEEEcCcHHHHHHHHHh
Confidence 345567777777776321 3799999999999998887
No 284
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=43.34 E-value=22 Score=40.14 Aligned_cols=62 Identities=31% Similarity=0.447 Sum_probs=42.8
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCCCCCcceEEeC--CHHHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTPKETHASYSLQ--EPSEVKDFLR 366 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~~~t~A~y~l~--d~~eV~~~L~ 366 (379)
.|..-++. ++.+|. -+-++||+.||=.+++++ ..||.-+.+..--+|.|.-+ +...|...++
T Consensus 840 qK~~Lie~-lQkl~y------~VgfCGDGANDCgALKaA-----dvGISLSeaEASvAApFTSk~~~I~cVp~vIr 903 (1140)
T KOG0208|consen 840 QKAELIEA-LQKLGY------KVGFCGDGANDCGALKAA-----DVGISLSEAEASVAAPFTSKTPSISCVPDVIR 903 (1140)
T ss_pred hHHHHHHH-HHhcCc------EEEecCCCcchhhhhhhc-----ccCcchhhhhHhhcCccccCCCchhhHhHHHh
Confidence 57666655 455565 588999999999999998 46777777654456667654 5555555443
No 285
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=42.76 E-value=73 Score=30.92 Aligned_cols=25 Identities=20% Similarity=0.263 Sum_probs=18.4
Q ss_pred hccCCcEEEEEeCCCccCCCCCCCC
Q 017025 117 ASKGKKIVMFLDYDGTLAPIVEDPD 141 (379)
Q Consensus 117 ~~~~k~~liflD~DGTLl~~~~~pd 141 (379)
..+....++++|.||-+.....+|+
T Consensus 190 ~l~Ad~Li~lTDVdGVy~~dP~~~~ 214 (284)
T cd04256 190 ELKADLLILLSDVDGLYDGPPGSDD 214 (284)
T ss_pred HcCCCEEEEEeCCCeeecCCCCCCC
Confidence 4477888999999999976433343
No 286
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=42.31 E-value=33 Score=32.03 Aligned_cols=35 Identities=23% Similarity=0.103 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhCCCCCCCccE-EEEcCCc-CCHHHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVP-VYIGDDR-TDEDAFKVL 331 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~v-i~~GD~~-NDe~mf~~~ 331 (379)
+-.-++.+++.+++... +. ++|||+. +|+.+=+.+
T Consensus 190 ~~~~~~~~~~~~~~~~~---~~~~~IGD~~~~Di~~A~~~ 226 (236)
T TIGR01460 190 SPAIYRAALNLLQARPE---RRDVMVGDNLRTDILGAKNA 226 (236)
T ss_pred CHHHHHHHHHHhCCCCc---cceEEECCCcHHHHHHHHHC
Confidence 56678889999998754 45 9999998 899876654
No 287
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=41.79 E-value=27 Score=34.80 Aligned_cols=43 Identities=23% Similarity=0.404 Sum_probs=36.7
Q ss_pred cEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEc
Q 017025 122 KIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVT 166 (379)
Q Consensus 122 ~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~~vaIaT 166 (379)
.+||+=|+||.=.+-++||-...|.+....|.++|..+ |++.|
T Consensus 2 nlLivQDLDGVCm~LVkDPltR~ld~~Yv~A~~~l~~~--F~VLT 44 (381)
T PF09506_consen 2 NLLIVQDLDGVCMPLVKDPLTRRLDPDYVRAARQLEGH--FYVLT 44 (381)
T ss_pred CeeEEecCCccchhhccCccccccCHHHHHHHHHhcCc--EEEEe
Confidence 57899999999999999999999999999998888755 44555
No 288
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=41.75 E-value=32 Score=32.82 Aligned_cols=29 Identities=21% Similarity=0.310 Sum_probs=20.8
Q ss_pred ccHHHHHHhc-c-CCcEEEEEeCCCccCCCC
Q 017025 109 SKFEEIVNAS-K-GKKIVMFLDYDGTLAPIV 137 (379)
Q Consensus 109 ~~f~~~~~~~-~-~k~~liflD~DGTLl~~~ 137 (379)
.+|.++.++. + .+.-+|+||+|-||+...
T Consensus 5 ~s~~eV~~~~~~~~~~tLvvfDiDdTLi~~~ 35 (252)
T PF11019_consen 5 YSFHEVQDYLENADQDTLVVFDIDDTLITPK 35 (252)
T ss_pred cCHHHHHHHHHcCCCCeEEEEEcchhhhcCc
Confidence 3566665544 2 278899999999999753
No 289
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=41.11 E-value=46 Score=35.50 Aligned_cols=58 Identities=17% Similarity=0.265 Sum_probs=44.4
Q ss_pred CcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcccc
Q 017025 121 KKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVKLA 180 (379)
Q Consensus 121 k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~l~ 180 (379)
...+++++.||++...-.= ...+-+++.++|++|++. .+++++||.+...+..+.+..
T Consensus 384 g~~~~~~~~~~~~~g~~~~--~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~l 442 (562)
T TIGR01511 384 GSTSVLVAVNGELAGVFAL--EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL 442 (562)
T ss_pred CCEEEEEEECCEEEEEEEe--cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc
Confidence 3467888999998753211 124778999999999998 689999999998888776543
No 290
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=40.93 E-value=27 Score=30.30 Aligned_cols=61 Identities=21% Similarity=0.314 Sum_probs=38.2
Q ss_pred EEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCCh--hhHHhhccccCceEEecCCceEecCCC
Q 017025 124 VMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYF-PTAIVTGRCR--DKVFSFVKLAGLYYAGSHGMDIEGPSK 197 (379)
Q Consensus 124 liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~-~vaIaTGR~~--~~l~~~~~l~~l~li~~nGa~I~~~~~ 197 (379)
+-++||||.|+.... ...++ .-+.++.+.+.+ |++|+|=-.. +.+.++- ..-|+.+|.|..
T Consensus 45 iAildL~G~~l~l~S---~R~~~--~~evi~~I~~~G~PviVAtDV~p~P~~V~Kia--------~~f~A~ly~P~~ 108 (138)
T PF04312_consen 45 IAILDLDGELLDLKS---SRNMS--RSEVIEWISEYGKPVIVATDVSPPPETVKKIA--------RSFNAVLYTPER 108 (138)
T ss_pred EEEEecCCcEEEEEe---ecCCC--HHHHHHHHHHcCCEEEEEecCCCCcHHHHHHH--------HHhCCcccCCCC
Confidence 467899999997432 22333 457888888885 8999986543 3444432 223455566643
No 291
>PLN02458 transferase, transferring glycosyl groups
Probab=40.77 E-value=43 Score=33.30 Aligned_cols=35 Identities=20% Similarity=0.161 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCcC--CHHHHHHHHhc
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDDRT--DEDAFKVLRNR 334 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~~N--De~mf~~~~~~ 334 (379)
.-.||++|-++. ++ -++||+|+.| |++.|+.+++.
T Consensus 190 RN~AL~~IR~h~-l~-----GVVyFADDdNtYsl~LFeEmR~i 226 (346)
T PLN02458 190 RNLALRHIEHHK-LS-----GIVHFAGLSNVYDLDFFDEIRDI 226 (346)
T ss_pred HHHHHHHHHhcC-cC-----ceEEEccCCCcccHHHHHHHhcC
Confidence 456788877653 33 5999999998 88889998763
No 292
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=40.43 E-value=17 Score=33.37 Aligned_cols=15 Identities=53% Similarity=0.873 Sum_probs=12.6
Q ss_pred CcEEEEEeCCCccCC
Q 017025 121 KKIVMFLDYDGTLAP 135 (379)
Q Consensus 121 k~~liflD~DGTLl~ 135 (379)
++.++|+|+|||++-
T Consensus 2 kk~vi~sDFDGTITl 16 (220)
T COG4359 2 KKPVIFSDFDGTITL 16 (220)
T ss_pred CceEEEecCCCceEe
Confidence 467899999999986
No 293
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=39.12 E-value=19 Score=37.92 Aligned_cols=20 Identities=30% Similarity=0.223 Sum_probs=15.4
Q ss_pred hcCCEEEEcCCChhhHHhhc
Q 017025 158 RYFPTAIVTGRCRDKVFSFV 177 (379)
Q Consensus 158 ~~~~vaIaTGR~~~~l~~~~ 177 (379)
++...+|+|+-+...++.+.
T Consensus 121 ~~g~~vvVSASp~~~Vepfa 140 (497)
T PLN02177 121 SFGKRYIITASPRIMVEPFV 140 (497)
T ss_pred hCCCEEEEECCcHHHHHHHH
Confidence 33457999999998888776
No 294
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=38.99 E-value=28 Score=30.81 Aligned_cols=35 Identities=23% Similarity=0.268 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhC--CCCCCCccEEEEcCCc--------CCHHHHHHH
Q 017025 294 KGKALEFLLEALG--YANSKDVVPVYIGDDR--------TDEDAFKVL 331 (379)
Q Consensus 294 KG~Al~~Lle~lg--~~~~~~~~vi~~GD~~--------NDe~mf~~~ 331 (379)
+...++.+++.+| ++.+ ++++|||+. +|+.+=+.+
T Consensus 110 ~p~~~~~~~~~~~~~~~~~---~~v~VGD~~~~~~~~~~~Di~aA~~a 154 (166)
T TIGR01664 110 MTGMWEYLQSQYNSPIKMT---RSFYVGDAAGRKLDFSDADIKFAKNL 154 (166)
T ss_pred ccHHHHHHHHHcCCCCCch---hcEEEECCCCCCCCCchhHHHHHHHC
Confidence 3567899999998 7764 899999986 476654443
No 295
>PRK12314 gamma-glutamyl kinase; Provisional
Probab=33.43 E-value=1.5e+02 Score=28.30 Aligned_cols=19 Identities=21% Similarity=0.375 Sum_probs=15.9
Q ss_pred hccCCcEEEEEeCCCccCC
Q 017025 117 ASKGKKIVMFLDYDGTLAP 135 (379)
Q Consensus 117 ~~~~k~~liflD~DGTLl~ 135 (379)
..+....++++|.||-+..
T Consensus 166 ~l~Ad~liilTDVdGVy~~ 184 (266)
T PRK12314 166 LVKADLLIILSDIDGLYDK 184 (266)
T ss_pred HhCCCEEEEEeCCCcccCC
Confidence 3477888999999999975
No 296
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=32.34 E-value=47 Score=29.75 Aligned_cols=35 Identities=20% Similarity=0.222 Sum_probs=29.0
Q ss_pred cCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc
Q 017025 144 FMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 144 ~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~ 178 (379)
.+-+.+.+.|++|++. .+++|+||.+...+...+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~ 110 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLE 110 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHH
Confidence 4567889999999988 6999999999887776553
No 297
>PTZ00489 glutamate 5-kinase; Provisional
Probab=32.30 E-value=1.6e+02 Score=28.23 Aligned_cols=19 Identities=26% Similarity=0.363 Sum_probs=15.7
Q ss_pred hccCCcEEEEEeCCCccCC
Q 017025 117 ASKGKKIVMFLDYDGTLAP 135 (379)
Q Consensus 117 ~~~~k~~liflD~DGTLl~ 135 (379)
..+....++++|.||-+..
T Consensus 159 ~l~Ad~LiilTDVdGVy~~ 177 (264)
T PTZ00489 159 HFKADLLVILSDIDGYYTE 177 (264)
T ss_pred HhCCCEEEEeeccCeeEcC
Confidence 3477788999999999975
No 298
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=31.99 E-value=61 Score=30.17 Aligned_cols=36 Identities=17% Similarity=0.037 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCC-cCCHHHHHHH
Q 017025 294 KGKALEFLLEALGYANSKDVVPVYIGDD-RTDEDAFKVL 331 (379)
Q Consensus 294 KG~Al~~Lle~lg~~~~~~~~vi~~GD~-~NDe~mf~~~ 331 (379)
+...++.+++.+|.... +++++|||+ .+|+.+=+.+
T Consensus 197 ~~~~~~~~~~~~~~~~~--~~~~~vGD~~~~Di~~a~~~ 233 (242)
T TIGR01459 197 YPAIFHKALKECSNIPK--NRMLMVGDSFYTDILGANRL 233 (242)
T ss_pred CHHHHHHHHHHcCCCCc--ccEEEECCCcHHHHHHHHHC
Confidence 45567888888886421 279999999 5998876665
No 299
>cd02966 TlpA_like_family TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.
Probab=31.54 E-value=1.5e+02 Score=22.55 Aligned_cols=73 Identities=8% Similarity=0.107 Sum_probs=35.8
Q ss_pred CccccHHHHHHhcc-CCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhc---cccC
Q 017025 106 SALSKFEEIVNASK-GKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFV---KLAG 181 (379)
Q Consensus 106 sal~~f~~~~~~~~-~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~~vaIaTGR~~~~l~~~~---~l~~ 181 (379)
..+..+.++..... ..-.++.+++|+. . .++..+.+.+.. .++.+.++... .+.+.+ +.|.
T Consensus 36 ~~~~~l~~~~~~~~~~~~~~~~v~~d~~--~----------~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~P~ 100 (116)
T cd02966 36 AEMPELEALAKEYKDDGVEVVGVNVDDD--D----------PAAVKAFLKKYG--ITFPVLLDPDG-ELAKAYGVRGLPT 100 (116)
T ss_pred HHhHHHHHHHHHhCCCCeEEEEEECCCC--C----------HHHHHHHHHHcC--CCcceEEcCcc-hHHHhcCcCccce
Confidence 34444455444442 3446777777755 1 123444444443 33444444432 233333 4566
Q ss_pred ceEEecCCceEe
Q 017025 182 LYYAGSHGMDIE 193 (379)
Q Consensus 182 l~li~~nGa~I~ 193 (379)
++++..+|-.++
T Consensus 101 ~~l~d~~g~v~~ 112 (116)
T cd02966 101 TFLIDRDGRIRA 112 (116)
T ss_pred EEEECCCCcEEE
Confidence 667767776554
No 300
>cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis. Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als
Probab=31.32 E-value=1e+02 Score=28.58 Aligned_cols=61 Identities=15% Similarity=0.244 Sum_probs=37.3
Q ss_pred hccCCcEEEEEeCCCccCCCC-CCCCccc---CC-HHH---------HHHHHHHHhc-CCEEEEcCCChhhHHhhc
Q 017025 117 ASKGKKIVMFLDYDGTLAPIV-EDPDRAF---MT-NEM---------REAVRDVARY-FPTAIVTGRCRDKVFSFV 177 (379)
Q Consensus 117 ~~~~k~~liflD~DGTLl~~~-~~pd~~~---~s-~~~---------~~aL~~L~~~-~~vaIaTGR~~~~l~~~~ 177 (379)
..+....++++|.||-+.... ..|+... ++ +++ ..+++.+.+. .++.|+.|+....+.+++
T Consensus 144 ~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~~~~~a~~~~~~~~i~v~I~~g~~~~~l~~~l 219 (229)
T cd04239 144 EIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYDELLKKGLKVMDATALTLCRRNKIPIIVFNGLKPGNLLRAL 219 (229)
T ss_pred HcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHHHHHHHhcCCccHHHHHHHHHCCCeEEEECCCChhHHHHHH
Confidence 457888889999999996421 1122221 11 111 1334444444 588999999888777766
No 301
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=31.05 E-value=1.1e+02 Score=26.40 Aligned_cols=54 Identities=9% Similarity=0.124 Sum_probs=38.7
Q ss_pred cEEEEEeCCCccCCCCCCCCc----ccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHh
Q 017025 122 KIVMFLDYDGTLAPIVEDPDR----AFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFS 175 (379)
Q Consensus 122 ~~liflD~DGTLl~~~~~pd~----~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~ 175 (379)
++++.+|+|+||-|...++.+ -.+-+..+..|..|.+. ...+++|--+...+..
T Consensus 18 P~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~ 76 (144)
T KOG4549|consen 18 PRLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIAS 76 (144)
T ss_pred eEEEEecccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHH
Confidence 478899999999986554421 12456778899999999 5777777766665544
No 302
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=30.87 E-value=41 Score=31.81 Aligned_cols=25 Identities=16% Similarity=0.142 Sum_probs=19.2
Q ss_pred CCHHHHHHHHHHHhc-CCEEEEcCCC
Q 017025 145 MTNEMREAVRDVARY-FPTAIVTGRC 169 (379)
Q Consensus 145 ~s~~~~~aL~~L~~~-~~vaIaTGR~ 169 (379)
+-+.+++.|+.|.++ ..++++|||+
T Consensus 115 p~~Ga~elL~~L~~~G~~I~iVTnR~ 140 (237)
T PRK11009 115 PKEVARQLIDMHVKRGDSIYFITGRT 140 (237)
T ss_pred chHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 445678888888777 5888888886
No 303
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=30.84 E-value=1.4e+02 Score=27.12 Aligned_cols=52 Identities=27% Similarity=0.203 Sum_probs=35.3
Q ss_pred EEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCC
Q 017025 284 LEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTP 346 (379)
Q Consensus 284 lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~ 346 (379)
.+.|.+ |.--+...++.++++.. ..+++||..+|+.+=..+ |.. ++.+.+..
T Consensus 101 c~cRKP----~~gm~~~~~~~~~iD~~---~s~~VGD~~~Dlq~a~n~---gi~-~~~~~~~~ 152 (181)
T COG0241 101 CDCRKP----KPGMLLSALKEYNIDLS---RSYVVGDRLTDLQAAENA---GIK-GVLVLTGI 152 (181)
T ss_pred CcccCC----ChHHHHHHHHHhCCCcc---ceEEecCcHHHHHHHHHC---CCC-ceEEEcCc
Confidence 455544 44556777888888875 799999999997755554 333 66665543
No 304
>PRK00358 pyrH uridylate kinase; Provisional
Probab=30.33 E-value=1.2e+02 Score=28.09 Aligned_cols=64 Identities=17% Similarity=0.185 Sum_probs=38.6
Q ss_pred HHhccCCcEEEEEeCCCccCCC-CCCCCccc---CCH-HH---------HHHHHHHHhc-CCEEEEcCCChhhHHhhcc
Q 017025 115 VNASKGKKIVMFLDYDGTLAPI-VEDPDRAF---MTN-EM---------REAVRDVARY-FPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 115 ~~~~~~k~~liflD~DGTLl~~-~~~pd~~~---~s~-~~---------~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~ 178 (379)
+...+....++++|.||-.... ..+|+... ++. ++ ..+++.+.+. .++.|++|+....+..++.
T Consensus 144 A~~l~A~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~g~~~~d~~a~~~a~~~~i~v~I~~g~~~~~l~~~l~ 222 (231)
T PRK00358 144 AEEIGADVLLKATNVDGVYDADPKKDPDAKKYDRLTYDEVLEKGLKVMDATAISLARDNKIPIIVFNMNKPGNLKRVVK 222 (231)
T ss_pred HHHcCCCEEEEeeCcCceEcCCCCCCCCCEEeeEecHHHHHHcCCcchhHHHHHHHHHcCCcEEEECCCCchHHHHHHC
Confidence 3345888888999999999742 12233222 211 01 1233333344 5889999998888887763
No 305
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=29.95 E-value=82 Score=35.40 Aligned_cols=53 Identities=21% Similarity=0.238 Sum_probs=40.5
Q ss_pred CCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCC---CCCcceEEeC
Q 017025 292 WDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTP---KETHASYSLQ 356 (379)
Q Consensus 292 ~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~---~~t~A~y~l~ 356 (379)
.||-.-++-|.+. | +-+.+-||+-||-++++.+ ..|.+||-+. .|++++.++-
T Consensus 725 ~DK~lLVk~L~~~-g------~VVAVTGDGTNDaPALkeA-----DVGlAMGIaGTeVAKEaSDIIi~ 780 (1034)
T KOG0204|consen 725 NDKHLLVKGLIKQ-G------EVVAVTGDGTNDAPALKEA-----DVGLAMGIAGTEVAKEASDIIIL 780 (1034)
T ss_pred chHHHHHHHHHhc-C------cEEEEecCCCCCchhhhhc-----ccchhccccchhhhhhhCCeEEE
Confidence 4888888887742 2 2466779999999999998 5888888775 3578888764
No 306
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=29.91 E-value=1.9e+02 Score=27.08 Aligned_cols=46 Identities=15% Similarity=0.237 Sum_probs=28.8
Q ss_pred CcEEEEEeC--CCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcC--CChhhHHhhcc
Q 017025 121 KKIVMFLDY--DGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTG--RCRDKVFSFVK 178 (379)
Q Consensus 121 k~~liflD~--DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTG--R~~~~l~~~~~ 178 (379)
-..++++|+ |||+... ..+.++++.+. ..-+|++| |+.+.+..++.
T Consensus 162 ~~~ii~tdi~~dGt~~G~------------~~~li~~l~~~~~ipvi~~GGi~s~edi~~l~~ 212 (234)
T PRK13587 162 LGGIIYTDIAKDGKMSGP------------NFELTGQLVKATTIPVIASGGIRHQQDIQRLAS 212 (234)
T ss_pred CCEEEEecccCcCCCCcc------------CHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHH
Confidence 356777777 7888662 14456666655 34467777 66777777654
No 307
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=29.63 E-value=29 Score=35.91 Aligned_cols=57 Identities=19% Similarity=0.276 Sum_probs=30.8
Q ss_pred cCCcEEEEEeCCCccCCCCCCCC------cccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHh
Q 017025 119 KGKKIVMFLDYDGTLAPIVEDPD------RAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFS 175 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~~~~pd------~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~ 175 (379)
+...+++++|+||||+....--+ +-.-+-.+...-.++.++ ..+.-.|.|+...+..
T Consensus 372 r~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~s 435 (580)
T COG5083 372 RNNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADS 435 (580)
T ss_pred eCCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCceEEEEEecccccchhh
Confidence 55667899999999997311000 000011122222333444 3677788888876554
No 308
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=28.84 E-value=46 Score=28.00 Aligned_cols=34 Identities=18% Similarity=0.271 Sum_probs=28.6
Q ss_pred cCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhc
Q 017025 144 FMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFV 177 (379)
Q Consensus 144 ~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~ 177 (379)
.+.+.+.+.|++|+++ ++++++|+.+...+...+
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l 111 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVL 111 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccc
Confidence 4567899999999977 799999999998777655
No 309
>TIGR00071 hisT_truA pseudouridylate synthase I. universal so far, single copy in all prokaryotes, 3 in yeast. Trusted cutoff for orthology is about 100 based on 1 match only in complete prokaryote with length 200.
Probab=28.77 E-value=68 Score=29.99 Aligned_cols=55 Identities=22% Similarity=0.384 Sum_probs=39.9
Q ss_pred cEEEEEeCCCccC-CCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhh
Q 017025 122 KIVMFLDYDGTLA-PIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSF 176 (379)
Q Consensus 122 ~~liflD~DGTLl-~~~~~pd~~~~s~~~~~aL~~L~~~~~vaIaTGR~~~~l~~~ 176 (379)
+.++.+=||||=. .....|+...+..++.++|.++.....-++.+||.=..|...
T Consensus 2 ~~~l~i~YdGt~f~G~Q~Q~~~~TVq~~le~aL~~~~~~~i~~~~agRTD~GVHA~ 57 (227)
T TIGR00071 2 KIALKIAYDGSNYHGWQRQPNKRTVQGELEKALEAIGKKKITIMSAGRTDKGVHAM 57 (227)
T ss_pred eEEEEEEEcCCCeeEEeECcCCCCHHHHHHHHHHHHhCCCeeEEeeccCcCCcccc
Confidence 4567889999955 344445556788888888888876544578899998777664
No 310
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=28.00 E-value=90 Score=30.59 Aligned_cols=68 Identities=22% Similarity=0.417 Sum_probs=52.0
Q ss_pred hCCCcEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCC
Q 017025 271 KYPKLTLTQGRMVLEIRPTIKWDKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTP 346 (379)
Q Consensus 271 ~~p~l~v~~g~~~lEI~P~~g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~ 346 (379)
+||++..+.+. -+.... ...+..=+..|++.+++.. .++++|-|+.=|.+++.+..+. ..|++|-|.+
T Consensus 69 N~PGf~~t~~~--~~~~~~-n~er~~~~~~ll~~l~i~~----~~i~~gHSrGcenal~la~~~~-~~g~~lin~~ 136 (297)
T PF06342_consen 69 NYPGFGFTPGY--PDQQYT-NEERQNFVNALLDELGIKG----KLIFLGHSRGCENALQLAVTHP-LHGLVLINPP 136 (297)
T ss_pred CCCCCCCCCCC--cccccC-hHHHHHHHHHHHHHcCCCC----ceEEEEeccchHHHHHHHhcCc-cceEEEecCC
Confidence 56766665553 344455 6689999999999999986 6999999999999999876653 5677777753
No 311
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=27.68 E-value=70 Score=28.54 Aligned_cols=34 Identities=6% Similarity=0.077 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc
Q 017025 145 MTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 145 ~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~ 178 (379)
+-+.+.+.|+.|++. .+++|+|+.+...+...+.
T Consensus 86 ~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~ 120 (213)
T TIGR01449 86 VFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLE 120 (213)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Confidence 456789999999988 6999999999887777653
No 312
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=27.61 E-value=1.3e+02 Score=24.60 Aligned_cols=36 Identities=19% Similarity=0.312 Sum_probs=28.5
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCc-CCHHHHHHHHh
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDR-TDEDAFKVLRN 333 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~-NDe~mf~~~~~ 333 (379)
.|-..|+.+++.+.-. ..|.||||. -|.+....+.+
T Consensus 50 ~K~~~i~~i~~~fP~~-----kfiLIGDsgq~DpeiY~~ia~ 86 (100)
T PF09949_consen 50 HKRDNIERILRDFPER-----KFILIGDSGQHDPEIYAEIAR 86 (100)
T ss_pred HHHHHHHHHHHHCCCC-----cEEEEeeCCCcCHHHHHHHHH
Confidence 7999999999987532 699999955 79998866543
No 313
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=27.51 E-value=76 Score=28.83 Aligned_cols=35 Identities=9% Similarity=0.036 Sum_probs=29.3
Q ss_pred cCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc
Q 017025 144 FMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 144 ~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~ 178 (379)
.+-+.+.+.|+.|+++ .+++|+|+.+...+..+++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~ 127 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLT 127 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHH
Confidence 4557899999999988 6999999999888776654
No 314
>PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional
Probab=27.03 E-value=1.4e+02 Score=28.46 Aligned_cols=23 Identities=30% Similarity=0.423 Sum_probs=18.1
Q ss_pred HHHHhccCCcEEEEEeCCCccCC
Q 017025 113 EIVNASKGKKIVMFLDYDGTLAP 135 (379)
Q Consensus 113 ~~~~~~~~k~~liflD~DGTLl~ 135 (379)
.++...+..+.++++|.||-+..
T Consensus 176 ~lA~~l~A~~li~ltdv~Gv~~~ 198 (268)
T PRK14058 176 AIAGALKAEALVLLSDVPGLLRD 198 (268)
T ss_pred HHHHHcCCCEEEEEeCChhhccC
Confidence 34445588889999999999975
No 315
>PRK14557 pyrH uridylate kinase; Provisional
Probab=26.65 E-value=1.8e+02 Score=27.62 Aligned_cols=62 Identities=10% Similarity=0.130 Sum_probs=37.4
Q ss_pred hccCCcEEEE-EeCCCccCCC-CCCCCcccCCH---------HH----HHHHHHHHhc-CCEEEEcCCChhhHHhhcc
Q 017025 117 ASKGKKIVMF-LDYDGTLAPI-VEDPDRAFMTN---------EM----REAVRDVARY-FPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 117 ~~~~k~~lif-lD~DGTLl~~-~~~pd~~~~s~---------~~----~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~ 178 (379)
..+....+++ +|.||-.... ..+|+...++. +. ..+++...+. .++.|++|+....+..++.
T Consensus 151 ~l~Ad~li~~ttdVdGvY~~DP~~~~~Ak~i~~i~~~e~~~~~~~~~~~~A~~~a~~~gi~v~I~ng~~~~~l~~~l~ 228 (247)
T PRK14557 151 EMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQNIQVMDQAALLLARDYNLPAHVFNFDEPGVMRRICL 228 (247)
T ss_pred HhCCCEEEEecCCcCEeECCCCCCCCCCEEeeEEChhhhcccCHHHHHHHHHHHHHHCCCcEEEEeCCCChHHHHHHc
Confidence 3477777777 4999998752 22233222211 11 1223333344 5999999999998888874
No 316
>cd04731 HisF The cyclase subunit of imidazoleglycerol phosphate synthase (HisF). Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to imidazole glycerol phosphate (ImGP) and 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR). This conversion involves two tightly coupled reactions in distinct active sites of IGPS. The two catalytic domains can be fused, like in fungi and plants, or peformed by a heterodimer (HisH-glutaminase and HisF-cyclase), like in bacteria.
Probab=26.60 E-value=2e+02 Score=26.65 Aligned_cols=59 Identities=15% Similarity=0.062 Sum_probs=37.9
Q ss_pred ccHHHHHHhccCCcEEEEEeCC------CccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCCh
Q 017025 109 SKFEEIVNASKGKKIVMFLDYD------GTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCR 170 (379)
Q Consensus 109 ~~f~~~~~~~~~k~~liflD~D------GTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~ 170 (379)
..|.++.+.+.+.+..+.+|+- |++....- ...-..++.+.++++.+. ...+++||+..
T Consensus 108 ~~~~~i~~~~~~~~i~~~ld~k~~~~~~~~v~~~~~---~~~~~~~~~~~~~~l~~~G~d~i~v~~i~~ 173 (243)
T cd04731 108 ELIREIAKRFGSQCVVVSIDAKRRGDGGYEVYTHGG---RKPTGLDAVEWAKEVEELGAGEILLTSMDR 173 (243)
T ss_pred HHHHHHHHHcCCCCEEEEEEeeecCCCceEEEEcCC---ceecCCCHHHHHHHHHHCCCCEEEEeccCC
Confidence 4577787777656788888853 55543211 011234556777888777 58899988875
No 317
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=26.19 E-value=64 Score=30.44 Aligned_cols=41 Identities=20% Similarity=0.171 Sum_probs=27.7
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCccEEEEcCCcC---------CHHHHHHHHh
Q 017025 291 KWDKGKALEFLLEALGYANSKDVVPVYIGDDRT---------DEDAFKVLRN 333 (379)
Q Consensus 291 g~sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~N---------De~mf~~~~~ 333 (379)
+..|..|++ .+..||+..+ .+-++||+=... +++||+.+-+
T Consensus 122 Na~k~HA~r-~Lk~LGieDc-Fegii~~e~~np~~~~~vcKP~~~afE~a~k 171 (244)
T KOG3109|consen 122 NAYKVHAIR-ILKKLGIEDC-FEGIICFETLNPIEKTVVCKPSEEAFEKAMK 171 (244)
T ss_pred CCcHHHHHH-HHHHhChHHh-ccceeEeeccCCCCCceeecCCHHHHHHHHH
Confidence 457888865 5566888875 346888876641 6778877643
No 318
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=25.99 E-value=1.4e+02 Score=28.71 Aligned_cols=58 Identities=17% Similarity=0.171 Sum_probs=38.7
Q ss_pred CCcEEEEEeCCCccCCCCC---------------------CCCcccCCHHHHHHHHHHHhcC-------CEEEEcCCChh
Q 017025 120 GKKIVMFLDYDGTLAPIVE---------------------DPDRAFMTNEMREAVRDVARYF-------PTAIVTGRCRD 171 (379)
Q Consensus 120 ~k~~liflD~DGTLl~~~~---------------------~pd~~~~s~~~~~aL~~L~~~~-------~vaIaTGR~~~ 171 (379)
..+.=|+||-|++|..... .|-..-+-.....+|.+|++.+ .++|+|.|+..
T Consensus 119 ~~qlRIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~ap 198 (264)
T PF06189_consen 119 DDQLRIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAP 198 (264)
T ss_pred CCceEEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCc
Confidence 4567799999999997211 0111112346677888888752 48999999987
Q ss_pred hHHhhc
Q 017025 172 KVFSFV 177 (379)
Q Consensus 172 ~l~~~~ 177 (379)
.-.+.+
T Consensus 199 ah~RvI 204 (264)
T PF06189_consen 199 AHERVI 204 (264)
T ss_pred hhHHHH
Confidence 765554
No 319
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=25.95 E-value=1.1e+02 Score=29.56 Aligned_cols=42 Identities=33% Similarity=0.351 Sum_probs=31.7
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCCc-CCHHHHHHHHhcCCeE-EEEecCC
Q 017025 296 KALEFLLEALGYANSKDVVPVYIGDDR-TDEDAFKVLRNRGQGF-GILVSKT 345 (379)
Q Consensus 296 ~Al~~Lle~lg~~~~~~~~vi~~GD~~-NDe~mf~~~~~~~~G~-gVaVgna 345 (379)
...+..++.++...+ .++++||+. +|+.+=+.+ |+ +++|..+
T Consensus 194 ~i~~~al~~~~~~~~---~~~mVGD~~~TDI~~a~~~-----G~~t~LV~TG 237 (269)
T COG0647 194 AIYEAALEKLGLDRS---EVLMVGDRLDTDILGAKAA-----GLDTLLVLTG 237 (269)
T ss_pred HHHHHHHHHhCCCcc---cEEEEcCCchhhHHHHHHc-----CCCEEEEccC
Confidence 456888889998775 899999987 787765554 55 6777665
No 320
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=25.87 E-value=57 Score=30.84 Aligned_cols=17 Identities=29% Similarity=0.266 Sum_probs=14.8
Q ss_pred EEEEcCCcCCHHHHHHH
Q 017025 315 PVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 315 vi~~GD~~NDe~mf~~~ 331 (379)
++++||+.+|+.+-+.+
T Consensus 187 ~i~vGDs~~DI~aAk~A 203 (237)
T TIGR01672 187 RIHYGDSDNDITAAKEA 203 (237)
T ss_pred eEEEeCCHHHHHHHHHC
Confidence 79999999999877766
No 321
>cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis. G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir
Probab=25.81 E-value=93 Score=29.32 Aligned_cols=21 Identities=14% Similarity=0.308 Sum_probs=16.9
Q ss_pred HHhccCCcEEEEEeCCCccCC
Q 017025 115 VNASKGKKIVMFLDYDGTLAP 135 (379)
Q Consensus 115 ~~~~~~k~~liflD~DGTLl~ 135 (379)
+...+....++++|.||-+..
T Consensus 152 A~~l~Ad~liilTDVdGvy~~ 172 (251)
T cd04242 152 AGLVNADLLILLSDVDGLYDK 172 (251)
T ss_pred HHHcCCCEEEEecCcCEEEeC
Confidence 334588889999999999975
No 322
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=25.20 E-value=1.8e+02 Score=28.09 Aligned_cols=59 Identities=25% Similarity=0.402 Sum_probs=33.9
Q ss_pred HHHhccCCcEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhc
Q 017025 114 IVNASKGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFV 177 (379)
Q Consensus 114 ~~~~~~~k~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~~vaIaTGR~~~~l~~~~ 177 (379)
++...+..+.++++|.||-+.+. .+|+ ..++.-..+-++++.... .+||....+++...
T Consensus 189 lA~~l~Ad~li~lTdv~Gv~~~~-~d~~-~~i~~i~~~e~~~l~~~g---~~tGGM~~Kl~aa~ 247 (284)
T CHL00202 189 IAAKLNAEKLILLTDTPGILADI-NDPN-SLISTLNIKEARNLASTG---IISGGMIPKVNCCI 247 (284)
T ss_pred HHHHhCCCEEEEEeCChhhcCCC-CCCC-CccccccHHHHHHHHhcC---CCCCCHHHHHHHHH
Confidence 34445888999999999999753 2333 222222223344443322 35777777766643
No 323
>PRK14558 pyrH uridylate kinase; Provisional
Probab=25.20 E-value=1.5e+02 Score=27.40 Aligned_cols=61 Identities=15% Similarity=0.135 Sum_probs=37.0
Q ss_pred hccCCcEEEEEeCCCccCCC-CCCCCcccCCH----HHH---------HHHHHHHhc-CCEEEEcCCChhhHHhhc
Q 017025 117 ASKGKKIVMFLDYDGTLAPI-VEDPDRAFMTN----EMR---------EAVRDVARY-FPTAIVTGRCRDKVFSFV 177 (379)
Q Consensus 117 ~~~~k~~liflD~DGTLl~~-~~~pd~~~~s~----~~~---------~aL~~L~~~-~~vaIaTGR~~~~l~~~~ 177 (379)
..+....++++|.||-.... ..+|+...++. ++. ++++-+.++ .++.|++|+....+..++
T Consensus 144 ~l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~g~~~~d~~a~~~a~~~gi~v~I~ng~~~~~l~~~l 219 (231)
T PRK14558 144 EMKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFSEAIKMGLKVMDTEAFSICKKYGITILVINFFEPGNLLKAL 219 (231)
T ss_pred HcCCCEEEEEecCCeeEccCCCCCCCCeEcccccHHHHHHcCcccccHHHHHHHHHCCCCEEEEeCCCCCHHHHHH
Confidence 34888899999999999752 12233222222 111 233333344 588999998877776665
No 324
>PRK14556 pyrH uridylate kinase; Provisional
Probab=25.02 E-value=1.5e+02 Score=28.35 Aligned_cols=61 Identities=11% Similarity=0.066 Sum_probs=40.7
Q ss_pred ccCCcEEEEEeCCCccCCC-CCCCCccc---CC------HH----HHHHHHHHHhc-CCEEEEcCCChhhHHhhcc
Q 017025 118 SKGKKIVMFLDYDGTLAPI-VEDPDRAF---MT------NE----MREAVRDVARY-FPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 118 ~~~k~~liflD~DGTLl~~-~~~pd~~~---~s------~~----~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~ 178 (379)
.+....++++|.||-.... ..+|+... ++ .. -..+++.+.++ .+++|+.|+....+.+++.
T Consensus 163 l~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e~~~~~l~vmd~~A~~~a~~~gIpi~I~ng~~~~~L~~~l~ 238 (249)
T PRK14556 163 IGADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSEVVSKELNVMDLGAFTQCRDFGIPIYVFDLTQPNALVDAVL 238 (249)
T ss_pred cCCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhhhcccchHhHHHHHHHHHHHCCCcEEEECCCCchHHHHHHc
Confidence 4888888999999998642 22232111 11 11 13566666676 6999999999999988773
No 325
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=24.66 E-value=57 Score=36.54 Aligned_cols=28 Identities=29% Similarity=0.469 Sum_probs=22.7
Q ss_pred cEEEEcCCcCCHHHHHHHHhcCCeEEEEecCCC
Q 017025 314 VPVYIGDDRTDEDAFKVLRNRGQGFGILVSKTP 346 (379)
Q Consensus 314 ~vi~~GD~~NDe~mf~~~~~~~~G~gVaVgna~ 346 (379)
.++.+||+-||..+++.+ -.||+.=|++
T Consensus 808 ~TLMCGDGTNDVGALK~A-----hVGVALL~~~ 835 (1160)
T KOG0209|consen 808 VTLMCGDGTNDVGALKQA-----HVGVALLNNP 835 (1160)
T ss_pred EEEEecCCCcchhhhhhc-----ccceehhcCC
Confidence 589999999999999998 4677665554
No 326
>TIGR02076 pyrH_arch uridylate kinase, putative. This family consists of the archaeal and spirochete proteins most closely related to bacterial uridylate kinases (TIGR02075), an enzyme involved in pyrimidine biosynthesis. Members are likely, but not known, to be functionally equivalent to their bacterial counterparts. However, substantial sequence differences suggest that regulatory mechanisms may be different; the bacterial form is allosterically regulated by GTP.
Probab=23.87 E-value=2.4e+02 Score=25.89 Aligned_cols=21 Identities=19% Similarity=0.234 Sum_probs=16.6
Q ss_pred HHhccCCcEEEEEeCCCccCC
Q 017025 115 VNASKGKKIVMFLDYDGTLAP 135 (379)
Q Consensus 115 ~~~~~~k~~liflD~DGTLl~ 135 (379)
+...+....++++|.||-+..
T Consensus 125 A~~l~A~~li~ltdVdGvy~~ 145 (221)
T TIGR02076 125 AEFSKADLLINATNVDGVYDK 145 (221)
T ss_pred HHHcCCCEEEEEeCCCcccCC
Confidence 334588888899999999964
No 327
>PF13382 Adenine_deam_C: Adenine deaminase C-terminal domain; PDB: 3T8L_B 3T81_A 3NQB_A.
Probab=23.19 E-value=3.1e+02 Score=24.64 Aligned_cols=55 Identities=27% Similarity=0.267 Sum_probs=34.0
Q ss_pred cEEEEcCCcCCHHHHHHHHh---cCCeEEEEecCCCCCCcceEEe--------CCHHHHHHHHHHHHHhhh
Q 017025 314 VPVYIGDDRTDEDAFKVLRN---RGQGFGILVSKTPKETHASYSL--------QEPSEVKDFLRRLVQWKR 373 (379)
Q Consensus 314 ~vi~~GD~~NDe~mf~~~~~---~~~G~gVaVgna~~~t~A~y~l--------~d~~eV~~~L~~Lv~~~~ 373 (379)
.++++|+ ||++|..++++ .+.|+.++-.. +-.|.--| .+.++|.+.++.|-+.-+
T Consensus 67 niiviG~--~~~dm~~A~n~l~~~gGG~vvv~~g---~v~a~lpLpi~GlmS~~~~eev~~~~~~l~~~~~ 132 (171)
T PF13382_consen 67 NIIVIGT--NDEDMALAANRLIEMGGGIVVVDDG---EVLAELPLPIAGLMSDLPAEEVARQLEELEEALR 132 (171)
T ss_dssp -EEEEES--SHHHHHHHHHHHHHTTSEEEEEETT---EEEEEEE-TBTTTBBSS-HHHHHHHHHHHHHHHH
T ss_pred CEEEEEC--CHHHHHHHHHHHHHhCCCEEEEECC---EEEEEEeccccceecCCCHHHHHHHHHHHHHHHH
Confidence 7999999 58889877664 35577665432 22232222 356789888888876443
No 328
>cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis. The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=23.03 E-value=2.5e+02 Score=26.84 Aligned_cols=21 Identities=14% Similarity=0.329 Sum_probs=16.7
Q ss_pred HHhccCCcEEEEEeCCCccCC
Q 017025 115 VNASKGKKIVMFLDYDGTLAP 135 (379)
Q Consensus 115 ~~~~~~k~~liflD~DGTLl~ 135 (379)
+...+....++++|.||-+..
T Consensus 171 A~~l~ad~li~~TdVdGVy~~ 191 (262)
T cd04255 171 AEVIGARNLIFVKDEDGLYTA 191 (262)
T ss_pred HHHhCCCEEEEEeccCeeECC
Confidence 334577889999999999973
No 329
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=22.75 E-value=1.1e+02 Score=27.11 Aligned_cols=35 Identities=14% Similarity=0.118 Sum_probs=29.5
Q ss_pred cCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc
Q 017025 144 FMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 144 ~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~ 178 (379)
.+-+.+.+.|++++++ .+++|+||.....+..+..
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~ 122 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLAR 122 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHH
Confidence 4667899999999888 6999999999888877653
No 330
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=22.63 E-value=1.5e+02 Score=27.69 Aligned_cols=47 Identities=17% Similarity=0.239 Sum_probs=31.6
Q ss_pred cEEEEEeCCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcC--CChhhHHhhcc
Q 017025 122 KIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYF-PTAIVTG--RCRDKVFSFVK 178 (379)
Q Consensus 122 ~~liflD~DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~~-~vaIaTG--R~~~~l~~~~~ 178 (379)
+.+++.|+|||+.... ...+.++++++.. .-++++| |+.+.+..++.
T Consensus 44 ~~l~ivDldga~~g~~----------~n~~~i~~i~~~~~~pv~~gGGIrs~edv~~l~~ 93 (228)
T PRK04128 44 DKIHVVDLDGAFEGKP----------KNLDVVKNIIRETGLKVQVGGGLRTYESIKDAYE 93 (228)
T ss_pred CEEEEEECcchhcCCc----------chHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHH
Confidence 4677899999997632 2367888888773 3355555 55677777654
No 331
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=22.52 E-value=2.1e+02 Score=31.61 Aligned_cols=60 Identities=22% Similarity=0.272 Sum_probs=38.2
Q ss_pred hccCCcEEEEEeCCCccCCCCCCCCccc-------------------------CCHHHHHHHHHHHhc-CCEEEEcCCCh
Q 017025 117 ASKGKKIVMFLDYDGTLAPIVEDPDRAF-------------------------MTNEMREAVRDVARY-FPTAIVTGRCR 170 (379)
Q Consensus 117 ~~~~k~~liflD~DGTLl~~~~~pd~~~-------------------------~s~~~~~aL~~L~~~-~~vaIaTGR~~ 170 (379)
..+....++++|.||-+.....+|+... |-+++ ++...+.+. .++.|++|+..
T Consensus 179 ~l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~i~~~~~~~~~tGGM~~Kl-~aa~~a~~~gi~v~I~~g~~~ 257 (715)
T TIGR01092 179 ELKADLLILLSDVEGLYDGPPSDDDSKLIDTFYKEKHQGEITFGTKSRLGRGGMTAKV-KAAVWAAYGGTPVIIASGTAP 257 (715)
T ss_pred HcCCCEEEEEeCCCeeeCCCCCCCCCeEeeeecccchhhhhccCcccccCCCCchHHH-HHHHHHHHCCCeEEEeCCCCc
Confidence 4478889999999999875322232211 22332 233344444 58899999988
Q ss_pred hhHHhhc
Q 017025 171 DKVFSFV 177 (379)
Q Consensus 171 ~~l~~~~ 177 (379)
..+..++
T Consensus 258 ~~l~~~l 264 (715)
T TIGR01092 258 KNITKVV 264 (715)
T ss_pred chHHHHh
Confidence 7787776
No 332
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=22.28 E-value=50 Score=31.84 Aligned_cols=18 Identities=28% Similarity=0.289 Sum_probs=14.8
Q ss_pred cCCcEEEEEeCCCccCCC
Q 017025 119 KGKKIVMFLDYDGTLAPI 136 (379)
Q Consensus 119 ~~k~~liflD~DGTLl~~ 136 (379)
..+++.+++|+|.||...
T Consensus 86 ~~~kk~lVLDLDeTLvHs 103 (262)
T KOG1605|consen 86 TVGRKTLVLDLDETLVHS 103 (262)
T ss_pred cCCCceEEEeCCCccccc
Confidence 556788999999998773
No 333
>cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD be
Probab=21.67 E-value=1.8e+02 Score=27.06 Aligned_cols=64 Identities=16% Similarity=0.128 Sum_probs=38.7
Q ss_pred HHhccCCcEEEEEeCCCccCCCC-CCCCccc---CCH-H---------HHHHHHHHHhc-CCEEEEcCCChhhHHhhcc
Q 017025 115 VNASKGKKIVMFLDYDGTLAPIV-EDPDRAF---MTN-E---------MREAVRDVARY-FPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 115 ~~~~~~k~~liflD~DGTLl~~~-~~pd~~~---~s~-~---------~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~ 178 (379)
+...+....++++|.||-+.... ..|+... ++. + -..+++-+.++ .++.|++|+....+..++.
T Consensus 144 A~~l~a~~l~~~tdVdGvy~~dp~~~~~a~~i~~i~~~~~~~~~~~~~d~~a~~~a~~~gi~~~I~~g~~~~~l~~~l~ 222 (231)
T cd04254 144 AIEINADVILKATKVDGVYDADPKKNPNAKRYDHLTYDEVLSKGLKVMDATAFTLCRDNNLPIVVFNINEPGNLLKAVK 222 (231)
T ss_pred HHHcCCCEEEEEeCCCEEEecCCCCCCCcEEeeEecHHHHHhcchhhhHHHHHHHHHHCCCeEEEEeCCCccHHHHHHC
Confidence 33458888889999999997421 2232211 111 0 11223333444 5889999998888888773
No 334
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=21.65 E-value=43 Score=30.29 Aligned_cols=11 Identities=36% Similarity=0.655 Sum_probs=10.3
Q ss_pred EEEeCCCccCC
Q 017025 125 MFLDYDGTLAP 135 (379)
Q Consensus 125 iflD~DGTLl~ 135 (379)
++.|+|||++.
T Consensus 9 ~ciDIDGtit~ 19 (194)
T COG5663 9 CCIDIDGTITD 19 (194)
T ss_pred eeeccCCceec
Confidence 78999999998
No 335
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=21.13 E-value=2.3e+02 Score=31.29 Aligned_cols=60 Identities=22% Similarity=0.375 Sum_probs=37.8
Q ss_pred hccCCcEEEEEeCCCccCCCCCCCCccc-------------------------CCHHHHHHHHHHHhc-CCEEEEcCCCh
Q 017025 117 ASKGKKIVMFLDYDGTLAPIVEDPDRAF-------------------------MTNEMREAVRDVARY-FPTAIVTGRCR 170 (379)
Q Consensus 117 ~~~~k~~liflD~DGTLl~~~~~pd~~~-------------------------~s~~~~~aL~~L~~~-~~vaIaTGR~~ 170 (379)
..+....++++|.||-+.....+|+... |.+++ ++...+.+. .+++|++|+..
T Consensus 187 ~l~Ad~li~~TdVdGvy~~~p~~~~a~~i~~i~~~~~~~~i~~~~~s~~~tGGM~~Kl-~Aa~~a~~~Gi~v~I~~g~~~ 265 (718)
T PLN02418 187 ELKADLLILLSDVEGLYTGPPSDPSSKLIHTYIKEKHQDEITFGEKSRVGRGGMTAKV-KAAVNAASAGIPVVITSGYAL 265 (718)
T ss_pred HcCCCEEEEeecCCeeecCCCCCCCceEcceecccchhhhhhcccccccCCCCcHHHH-HHHHHHHHCCCcEEEeCCCCc
Confidence 3477889999999999975322232111 11121 334444445 58899999988
Q ss_pred hhHHhhc
Q 017025 171 DKVFSFV 177 (379)
Q Consensus 171 ~~l~~~~ 177 (379)
..+.+++
T Consensus 266 ~~l~~~l 272 (718)
T PLN02418 266 DNIRKVL 272 (718)
T ss_pred chHHHHh
Confidence 7777776
No 336
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=21.13 E-value=2.4e+02 Score=23.21 Aligned_cols=50 Identities=12% Similarity=0.230 Sum_probs=33.7
Q ss_pred HHHHHhc-cCCcEEEEEeC-CCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhc
Q 017025 112 EEIVNAS-KGKKIVMFLDY-DGTLAPIVEDPDRAFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFV 177 (379)
Q Consensus 112 ~~~~~~~-~~k~~liflD~-DGTLl~~~~~pd~~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~ 177 (379)
+++++.. .++..++++|+ -||..+. + .++... ..+.++||=+...+.+.+
T Consensus 48 ~~~i~~~~~~~~viil~Dl~GGSp~n~---------------~-~~~~~~~~~~~visG~nlpmlle~~ 100 (122)
T cd00006 48 KAALAELDSGEGVLILTDLFGGSPNNA---------------A-ARLSMEHPPVEVIAGVNLPMLLEAA 100 (122)
T ss_pred HHHHHHhCCCCcEEEEEeCCCCCHHHH---------------H-HHHHhcCCCEEEEEccCHHHHHHHH
Confidence 3444444 45789999999 8887551 1 122223 678899999999888765
No 337
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=20.67 E-value=54 Score=34.51 Aligned_cols=14 Identities=21% Similarity=0.351 Sum_probs=11.9
Q ss_pred cEEEEEeCCCccCC
Q 017025 122 KIVMFLDYDGTLAP 135 (379)
Q Consensus 122 ~~liflD~DGTLl~ 135 (379)
+.-+++|+||||+.
T Consensus 8 ~~~~~fD~DGTLlr 21 (498)
T PLN02499 8 SYSVVSELEGTLLK 21 (498)
T ss_pred cceEEEecccceec
Confidence 34588999999998
No 338
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=20.44 E-value=1.5e+02 Score=25.89 Aligned_cols=37 Identities=14% Similarity=0.018 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHHhCCCCCCCccEEEEcCCcCCHHHHHHH
Q 017025 293 DKGKALEFLLEALGYANSKDVVPVYIGDDRTDEDAFKVL 331 (379)
Q Consensus 293 sKG~Al~~Lle~lg~~~~~~~~vi~~GD~~NDe~mf~~~ 331 (379)
=|-..++.|++.+.-.. ..++.+||+..+|..+++.+
T Consensus 102 ~K~~~l~~i~~~~~~~~--~~f~~~~gn~~~D~~~y~~~ 138 (157)
T smart00775 102 FKIACLRDIKSLFPPQG--NPFYAGFGNRITDVISYSAV 138 (157)
T ss_pred HHHHHHHHHHHhcCCCC--CCEEEEeCCCchhHHHHHHc
Confidence 38889999998764221 12567799999999999986
No 339
>KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones]
Probab=20.25 E-value=2e+02 Score=28.50 Aligned_cols=39 Identities=28% Similarity=0.397 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEcCCcC--CHHHHHHHHhc
Q 017025 295 GKALEFLLEALGYANSKDVVPVYIGDDRT--DEDAFKVLRNR 334 (379)
Q Consensus 295 G~Al~~Lle~lg~~~~~~~~vi~~GD~~N--De~mf~~~~~~ 334 (379)
-.|+++|-.+. ......+-++||+||.| |+++|+-++..
T Consensus 165 n~aL~~ir~~~-~~~~~~~GVVyFADDdN~YdleLF~eiR~v 205 (330)
T KOG1476|consen 165 NMALRWIRSRI-LRHHKLEGVVYFADDDNTYDLELFEEIRNV 205 (330)
T ss_pred HHHHHHHHHhc-ccccccceEEEEccCCcchhHHHHHHHhcc
Confidence 45666666332 11112346999999998 88889888764
No 340
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=20.09 E-value=1.9e+02 Score=28.09 Aligned_cols=36 Identities=6% Similarity=0.173 Sum_probs=30.6
Q ss_pred ccCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhcc
Q 017025 143 AFMTNEMREAVRDVARY-FPTAIVTGRCRDKVFSFVK 178 (379)
Q Consensus 143 ~~~s~~~~~aL~~L~~~-~~vaIaTGR~~~~l~~~~~ 178 (379)
..+.+...+.+..|+++ .+++|+||-....+...++
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~ 156 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLR 156 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHH
Confidence 34567889999999988 6999999999988888764
No 341
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=20.06 E-value=2.6e+02 Score=26.07 Aligned_cols=19 Identities=26% Similarity=0.497 Sum_probs=15.9
Q ss_pred hccCCcEEEEEeCCCccCC
Q 017025 117 ASKGKKIVMFLDYDGTLAP 135 (379)
Q Consensus 117 ~~~~k~~liflD~DGTLl~ 135 (379)
..+..+.++++|.||-+..
T Consensus 159 ~l~A~~li~ltdv~Gv~~~ 177 (252)
T cd04241 159 ALKPERVIFLTDVDGVYDK 177 (252)
T ss_pred HcCCCEEEEEeCCCeeECC
Confidence 3477889999999999965
No 342
>COG1608 Predicted archaeal kinase [General function prediction only]
Probab=20.06 E-value=4.3e+02 Score=25.30 Aligned_cols=21 Identities=19% Similarity=0.349 Sum_probs=17.2
Q ss_pred HhccCCcEEEEEeCCCccCCC
Q 017025 116 NASKGKKIVMFLDYDGTLAPI 136 (379)
Q Consensus 116 ~~~~~k~~liflD~DGTLl~~ 136 (379)
+..+..+.++++|.||-+...
T Consensus 158 ~~l~pd~v~f~tdVdGVy~~~ 178 (252)
T COG1608 158 KELKPDRVIFLTDVDGVYDRD 178 (252)
T ss_pred HHhCCCEEEEEecCCceecCC
Confidence 344888999999999999863
Done!