BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017026
(379 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 209/361 (57%), Gaps = 19/361 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +++++ + ED S +IV EL GGELFD I+K+ +SE +AA+++K + + H
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
+ HRDLKPEN L S ++D +K DFGLS ++ + D +G+ YY+APEVLR
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
Y + DVWSAGVILYILLSG PPF+ + E I +++ GK F+ W IS+ AKDLIR
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 186 KMLDQNPKRRLTAHEVLCHPWI----VDDKVAPDKPLDSAVLSRLKHFSAMNKLKKMALR 241
KML +P R+TA + L HPWI + D P + ++ ++ F A KL + AL
Sbjct: 259 KMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALL 318
Query: 242 VIAERLNE-EEIGGLKELFKMIDTDNSGTITFDELKDG------LKRVGSQ--------L 286
+A +L +E L E+F+ +DT+N G + DEL G LK V S
Sbjct: 319 YMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGST 378
Query: 287 MESEIKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDASGYITIDE 346
+E +I LM D+D SG+I+Y EF+A+ + L E + AF FDKD SG I+ E
Sbjct: 379 IEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKE 438
Query: 347 L 347
L
Sbjct: 439 L 439
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
++ FKM D D SG I+ EL + S + E++ +++ D + G +D+ EF+
Sbjct: 419 MERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFV 476
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/385 (37%), Positives = 229/385 (59%), Gaps = 19/385 (4%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
L +H ++++++D +EDK ++VME +GGELFD I+ + ++E +AA ++K ++ V
Sbjct: 92 LLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTY 151
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR 123
H + HRDLKPEN L S ++DA +K DFGLS ++ + + +G+ YY+APEVLR
Sbjct: 152 LHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR 211
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
K Y + DVWS GVIL+ILL+G PPF +T+ I R++ +GK F+S W N+SE AKDL
Sbjct: 212 KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDL 271
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWIVD----DKVAPDKPLDSAVLSRLKHFSAMNKLKKMA 239
I++ML + +RR++A + L HPWI + + + P + + ++ F KL + A
Sbjct: 272 IKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAA 331
Query: 240 LRVIAERL-NEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQ--------LMESE 290
L +A +L ++EE L ++F+ ID + G + EL DG ++ + +ESE
Sbjct: 332 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE 391
Query: 291 IKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHA 350
+ ++ AAD D +G IDY EF+ + L ++ L SAF FD+D +G I++DEL
Sbjct: 392 VDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV 451
Query: 351 CKEFGISELH---LDDMIKEIDQDD 372
FG+ L +MI ID ++
Sbjct: 452 ---FGLDHLESKTWKEMISGIDSNN 473
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 255 LKELFKMIDTDNSGTITFDELKD--GLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEF 311
L+ F+ D D +G I+ DEL GL + S+ K+++ D +N G +D+ EF
Sbjct: 428 LESAFQKFDQDGNGKISVDELASVFGLDHLESKTW----KEMISGIDSNNDGDVDFEEF 482
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 250 bits (639), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 135/372 (36%), Positives = 209/372 (56%), Gaps = 23/372 (6%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +++++++ +EDK ++VME+ GGELFD I+ + +SE +AA +MK ++ H
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
+ HRDLKPEN L S DA +K DFGLS ++ + +G+ YY+APEVLRK
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKK 181
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
Y + DVWS GVILYILL G PPF +T+ I +++ +GK F+ W +S+ AK L++
Sbjct: 182 YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVK 241
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLD------SAVLSRLKHFSAMNKLKKMA 239
ML P +R++A E L HPWIV K K D + L +K F + KL + A
Sbjct: 242 LMLTYEPSKRISAEEALNHPWIV--KFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAA 299
Query: 240 LRVIAERLNE-EEIGGLKELFKMIDTDNSGTITFDELKDGLKR-----------VGSQLM 287
+ + +L EE L ++F+ +D + G + EL +G ++ + S +
Sbjct: 300 MLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQI 359
Query: 288 ESEIKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDASGYITIDEL 347
E+E+ ++ + D D +G I+Y EF+ + L E LL+AF FD D SG IT +EL
Sbjct: 360 EAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEEL 419
Query: 348 QHACKEFGISEL 359
FG++E+
Sbjct: 420 GRL---FGVTEV 428
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 248 bits (632), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 222/386 (57%), Gaps = 23/386 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +++++++ +EDK ++V E+ GGELFD I+ + +SE +AA++++ ++ + H
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH 143
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
+ HRDLKPEN L S +DA ++ DFGLS ++ + D +G+ YY+APEVL
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 203
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
Y + DVWS GVILYILLSG PPF E I +++ +GK FE W +SESAKDLIR
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 263
Query: 186 KMLDQNPKRRLTAHEVLCHPWI---VDDKVAPDKP-LDSAVLSRLKHFSAMNKLKKMALR 241
KML P R++A + L H WI ++++ D P LD+A+L+ ++ F KL + AL
Sbjct: 264 KMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALL 322
Query: 242 VIAERL-NEEEIGGLKELFKMIDTDNSGTITFDELKDGLK---RVGSQ--------LMES 289
+ +L +++E L +F +D + G + EL +G K R+ Q +E
Sbjct: 323 YMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEH 382
Query: 290 EIKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDASGYITIDELQH 349
E+ ++DA D D +G I+Y EF+ + L E L AF FD D SG I+ EL
Sbjct: 383 EVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELAT 442
Query: 350 ACKEFGISELHLD---DMIKEIDQDD 372
FG+S++ + ++ E+D+++
Sbjct: 443 I---FGVSDVDSETWKSVLSEVDKNN 465
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 255 LKELFKMIDTDNSGTITFDELKD--GLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L+ F+M D+DNSG I+ EL G+ V S+ +S ++ D +N G +D+ EF
Sbjct: 420 LERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKS----VLSEVDKNNDGEVDFDEFQ 475
Query: 313 AATLHL 318
L L
Sbjct: 476 QMLLKL 481
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 248 bits (632), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 222/386 (57%), Gaps = 23/386 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +++++++ +EDK ++V E+ GGELFD I+ + +SE +AA++++ ++ + H
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH 167
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
+ HRDLKPEN L S +DA ++ DFGLS ++ + D +G+ YY+APEVL
Sbjct: 168 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 227
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
Y + DVWS GVILYILLSG PPF E I +++ +GK FE W +SESAKDLIR
Sbjct: 228 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 287
Query: 186 KMLDQNPKRRLTAHEVLCHPWI---VDDKVAPDKP-LDSAVLSRLKHFSAMNKLKKMALR 241
KML P R++A + L H WI ++++ D P LD+A+L+ ++ F KL + AL
Sbjct: 288 KMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALL 346
Query: 242 VIAERL-NEEEIGGLKELFKMIDTDNSGTITFDELKDGLK---RVGSQ--------LMES 289
+ +L +++E L +F +D + G + EL +G K R+ Q +E
Sbjct: 347 YMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEH 406
Query: 290 EIKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDASGYITIDELQH 349
E+ ++DA D D +G I+Y EF+ + L E L AF FD D SG I+ EL
Sbjct: 407 EVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELAT 466
Query: 350 ACKEFGISELHLD---DMIKEIDQDD 372
FG+S++ + ++ E+D+++
Sbjct: 467 I---FGVSDVDSETWKSVLSEVDKNN 489
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 255 LKELFKMIDTDNSGTITFDELKD--GLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L+ F+M D+DNSG I+ EL G+ V S+ +S ++ D +N G +D+ EF
Sbjct: 444 LERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKS----VLSEVDKNNDGEVDFDEFQ 499
Query: 313 AATLHL 318
L L
Sbjct: 500 QMLLKL 505
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 247 bits (631), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 222/386 (57%), Gaps = 23/386 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +++++++ +EDK ++V E+ GGELFD I+ + +SE +AA++++ ++ + H
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH 166
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
+ HRDLKPEN L S +DA ++ DFGLS ++ + D +G+ YY+APEVL
Sbjct: 167 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 226
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
Y + DVWS GVILYILLSG PPF E I +++ +GK FE W +SESAKDLIR
Sbjct: 227 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 286
Query: 186 KMLDQNPKRRLTAHEVLCHPWI---VDDKVAPDKP-LDSAVLSRLKHFSAMNKLKKMALR 241
KML P R++A + L H WI ++++ D P LD+A+L+ ++ F KL + AL
Sbjct: 287 KMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALL 345
Query: 242 VIAERL-NEEEIGGLKELFKMIDTDNSGTITFDELKDGLK---RVGSQ--------LMES 289
+ +L +++E L +F +D + G + EL +G K R+ Q +E
Sbjct: 346 YMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEH 405
Query: 290 EIKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDASGYITIDELQH 349
E+ ++DA D D +G I+Y EF+ + L E L AF FD D SG I+ EL
Sbjct: 406 EVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELAT 465
Query: 350 ACKEFGISELHLD---DMIKEIDQDD 372
FG+S++ + ++ E+D+++
Sbjct: 466 I---FGVSDVDSETWKSVLSEVDKNN 488
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 255 LKELFKMIDTDNSGTITFDELKD--GLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L+ F+M D+DNSG I+ EL G+ V S+ +S ++ D +N G +D+ EF
Sbjct: 443 LERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKS----VLSEVDKNNDGEVDFDEFQ 498
Query: 313 AATLHL 318
L L
Sbjct: 499 QMLLKL 504
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 212/378 (56%), Gaps = 12/378 (3%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +++++ D +EDK ++V E EGGELF++I+ + + E +AA +MK I+ + H
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH 163
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
+ HRD+KPEN L + + +K DFGLS F+ D D +G+ YY+APEVL+K
Sbjct: 164 KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKK 223
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
Y + DVWS GVI+YILL G PPF + + I +++ +GK F+ W NIS+ AK+LI+
Sbjct: 224 YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIK 283
Query: 186 KMLDQNPKRRLTAHEVLCHPWI---VDDKVAPDKPLDSAVLSRLKHFSAMNKLKKMALRV 242
ML + +R TA E L WI ++ D+ LS ++ F KL + A+
Sbjct: 284 LMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILF 343
Query: 243 IAERLNE-EEIGGLKELFKMIDTDNSGTITFDELKDG---LKRVGSQL-----MESEIKD 293
I +L EE L ++FK +D + G + EL +G L+ ++L +E E+ +
Sbjct: 344 IGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDN 403
Query: 294 LMDAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKE 353
++ D D +G I+Y EF++ + L EE L AF+ FD D SG IT +EL +
Sbjct: 404 ILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGL 463
Query: 354 FGISELHLDDMIKEIDQD 371
ISE +D++ E DQ+
Sbjct: 464 TSISEKTWNDVLGEADQN 481
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 255 LKELFKMIDTDNSGTITFDELKD--GLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L+ F + DTD SG IT +EL + GL + + E D++ AD + ID+ EF+
Sbjct: 437 LRRAFNLFDTDKSGKITKEELANLFGL----TSISEKTWNDVLGEADQNKDNMIDFDEFV 492
Query: 313 A 313
+
Sbjct: 493 S 493
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 216/386 (55%), Gaps = 23/386 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H ++ ++++ +EDK ++V E+ GGELFD I+ + +SE +AA++++ ++ + H
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXH 143
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
+ HRDLKPEN L S +DA ++ DFGLS ++ + D +G+ YY+APEVL
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT 203
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
Y + DVWS GVILYILLSG PPF E I +++ +GK FE W +SESAKDLIR
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 263
Query: 186 KMLDQNPKRRLTAHEVLCHPWI---VDDKVAPDKP-LDSAVLSRLKHFSAMNKLKKMALR 241
K L P R++A + L H WI ++++ D P LD+A+L+ ++ F KL + AL
Sbjct: 264 KXLTYVPSXRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALL 322
Query: 242 VIAERL-NEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVG-----------SQLMES 289
+L +++E L +F D + G + EL +G K + + +E
Sbjct: 323 YXGSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEH 382
Query: 290 EIKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDASGYITIDELQH 349
E+ ++DA D D +G I+Y EF+ L E L AF FD D SG I+ EL
Sbjct: 383 EVDQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELAT 442
Query: 350 ACKEFGISELHLD---DMIKEIDQDD 372
FG+S++ + ++ E+D+++
Sbjct: 443 I---FGVSDVDSETWKSVLSEVDKNN 465
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 255 LKELFKMIDTDNSGTITFDELKD--GLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L+ F+ D+DNSG I+ EL G+ V S+ +S ++ D +N G +D+ EF
Sbjct: 420 LERAFRXFDSDNSGKISSTELATIFGVSDVDSETWKS----VLSEVDKNNDGEVDFDEFQ 475
Query: 313 AATLHL 318
L L
Sbjct: 476 QXLLKL 481
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/129 (86%), Positives = 125/129 (96%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
AERL+EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGS+LMESEIKDLMDAADID S
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 304 GTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFGISELHLDD 363
GTIDYGEF+AAT+HLNKLEREENL+SAFS+FDKD SGYIT+DE+Q ACK+FG+ ++H+DD
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDD 120
Query: 364 MIKEIDQDD 372
MIKEIDQD+
Sbjct: 121 MIKEIDQDN 129
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
+A V +L EE L F D D SG IT DE++ K G L + I D++
Sbjct: 69 IAATVHLNKLEREE--NLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKE 124
Query: 298 ADIDNSGTIDYGEFLA 313
D DN G IDYGEF A
Sbjct: 125 IDQDNDGQIDYGEFAA 140
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 218 bits (554), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 142/202 (70%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +++R+++T+ED + +++VMELC GGELF+R+V K + E +AA++MK ++ V CH
Sbjct: 81 DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH 140
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
L V HRDLKPENFLFL+ D+ LK DFGL+ +KP ++ VG+PYYV+P+VL
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL 200
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
YGPE D WSAGV++Y+LL G PPF A T+ + +I EG F + W N+S A+ LIR
Sbjct: 201 YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIR 260
Query: 186 KMLDQNPKRRLTAHEVLCHPWI 207
++L ++PK+R+T+ + L H W
Sbjct: 261 RLLTKSPKQRITSLQALEHEWF 282
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 217 bits (553), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 142/201 (70%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +++R+++T+ED + +++VMELC GGELF+R+V K + E +AA++MK ++ V CH
Sbjct: 64 DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH 123
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
L V HRDLKPENFLFL+ D+ LK DFGL+ +KP ++ VG+PYYV+P+VL
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL 183
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
YGPE D WSAGV++Y+LL G PPF A T+ + +I EG F + W N+S A+ LIR
Sbjct: 184 YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIR 243
Query: 186 KMLDQNPKRRLTAHEVLCHPW 206
++L ++PK+R+T+ + L H W
Sbjct: 244 RLLTKSPKQRITSLQALEHEW 264
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 217 bits (552), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 156/236 (66%), Gaps = 2/236 (0%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVE 62
H +H ++V + D YE ++++M+L GGELFDRIV+KG Y+ER+A++L+ ++ V+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL 122
H LG+ HRDLKPEN L+ S+DED+ + +DFGLS P V S G+P YVAPEVL
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
+K Y D WS GVI YILL G PPF+ E + +F QIL+ + +F+S W +IS+SAK
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLKHFSAMNKLKK 237
D IR +++++P++R T + L HPWI D A DK + +V ++K A +K K+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGD-TALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 156/236 (66%), Gaps = 2/236 (0%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVE 62
H +H ++V + D YE ++++M+L GGELFDRIV+KG Y+ER+A++L+ ++ V+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL 122
H LG+ HRDLKPEN L+ S+DED+ + +DFGLS P V S G+P YVAPEVL
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
+K Y D WS GVI YILL G PPF+ E + +F QIL+ + +F+S W +IS+SAK
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLKHFSAMNKLKK 237
D IR +++++P++R T + L HPWI D A DK + +V ++K A +K K+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGD-TALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 156/236 (66%), Gaps = 2/236 (0%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVE 62
H +H ++V + D YE ++++M+L GGELFDRIV+KG Y+ER+A++L+ ++ V+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL 122
H LG+ HRDLKPEN L+ S+DED+ + +DFGLS P V S G+P YVAPEVL
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
+K Y D WS GVI YILL G PPF+ E + +F QIL+ + +F+S W +IS+SAK
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLKHFSAMNKLKK 237
D IR +++++P++R T + L HPWI D A DK + +V ++K A +K K+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGD-TALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/221 (46%), Positives = 148/221 (66%), Gaps = 2/221 (0%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVE 62
H +H ++V + D YE ++++M+L GGELFDRIV+KG Y+ER+A++L+ ++ V+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL 122
H LG+ HRDLKPEN L+ S+DED+ + +DFGLS P V S G+P YVAPEVL
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
+K Y D WS GVI YILL G PPF+ E + +F QIL+ + +F+S W +IS+SAK
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAV 222
D IR +++++P++R T + L HPWI D A DK + +V
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGD-TALDKNIHQSV 290
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 154/233 (66%), Gaps = 2/233 (0%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H+++V + D YE + +++VM+L GGELFDRIV+KG Y+E++A+ L++ ++ V H
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLH 137
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL-RK 124
+G+ HRDLKPEN L+ S DE++ + +DFGLS +V S G+P YVAPEVL +K
Sbjct: 138 RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQK 197
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
Y D WS GVI YILL G PPF+ E + +F QIL+ + +F+S W +IS+SAKD I
Sbjct: 198 PYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFI 257
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLKHFSAMNKLKK 237
R +++++P +R T + HPWI D A +K + +V ++++ A +K ++
Sbjct: 258 RNLMEKDPNKRYTCEQAARHPWIAGD-TALNKNIHESVSAQIRKNFAKSKWRQ 309
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/146 (66%), Positives = 120/146 (82%)
Query: 227 KHFSAMNKLKKMALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQL 286
K FSA NK KK ALRVIAE L+EEEI GLKE F ID D SG ITF+ELK GLKRVG+ L
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 287 MESEIKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDASGYITIDE 346
ESEI DL AAD+DNSGTIDY EF+AATLHLNK+ERE++L +AF++FDKD SGYIT DE
Sbjct: 61 KESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120
Query: 347 LQHACKEFGISELHLDDMIKEIDQDD 372
LQ AC+EFG+ ++ ++++ +++DQD+
Sbjct: 121 LQQACEEFGVEDVRIEELXRDVDQDN 146
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 259 FKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFLA 313
F D D SG IT DEL+ + G + + I++L D DN G IDY EF+A
Sbjct: 105 FTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELXRDVDQDNDGRIDYNEFVA 157
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 144/235 (61%), Gaps = 2/235 (0%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
L +H ++VR+HD+ ++ ++V +L GGELF+ IV + YSE +A+ ++ I+ V
Sbjct: 59 LLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE-VFSDVVGSPYYVAPEVL 122
CH +GV HRDLKPEN L S + AA+K DFGL++ + D+ + G+P Y++PEVL
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 123 RKH-YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
RK YG D+W+ GVILYILL G PPFW E + +++QI G DF S W ++ AK
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLKHFSAMNKLK 236
+LI +ML NP +R+TAHE L HPW+ + LK F+A KLK
Sbjct: 239 NLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK 293
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 132/202 (65%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +++++ + ED S +IV EL GGELFD I+K+ +SE +AA+++K + + H
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
+ HRDLKPEN L S ++D +K DFGLS ++ + D +G+ YY+APEVLR
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
Y + DVWSAGVILYILLSG PPF+ + E I +++ GK F+ W IS+ AKDLIR
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 186 KMLDQNPKRRLTAHEVLCHPWI 207
KML +P R+TA + L HPWI
Sbjct: 259 KMLTFHPSLRITATQCLEHPWI 280
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 132/202 (65%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +++++ + ED S +IV EL GGELFD I+K+ +SE +AA+++K + + H
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
+ HRDLKPEN L S ++D +K DFGLS ++ + D +G+ YY+APEVLR
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
Y + DVWSAGVILYILLSG PPF+ + E I +++ GK F+ W IS+ AKDLIR
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 186 KMLDQNPKRRLTAHEVLCHPWI 207
KML +P R+TA + L HPWI
Sbjct: 259 KMLTFHPSLRITATQCLEHPWI 280
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 149/262 (56%), Gaps = 5/262 (1%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
L +H ++VR+HD+ ++ ++V +L GGELF+ IV + YSE +A+ ++ I+ V
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE-VFSDVVGSPYYVAPEVL 122
CH G+ HRDLKPEN L S + AA+K DFGL++ + D+ + G+P Y++PEVL
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 123 RKH-YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
RK YG D+W+ GVILYILL G PPFW E + +++QI G DF S W ++ AK
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLKHFSAMNKLKKMALR 241
DLI KML NP +R+TA E L HPWI + LK F+A KLK L
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILT 298
Query: 242 VIAERLNEEEIGGLKELFKMID 263
+ L K L K D
Sbjct: 299 TM---LATRNFSAAKSLLKKPD 317
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 138/203 (67%), Gaps = 2/203 (0%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H+++V + D YE + ++VM+L GGELFDRI+++G Y+E++A+ +++ ++ V+ H
Sbjct: 64 KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLH 123
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL-RK 124
G+ HRDLKPEN L+L+ +E++ + TDFGLS + + + S G+P YVAPEVL +K
Sbjct: 124 ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM-EQNGIMSTACGTPGYVAPEVLAQK 182
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
Y D WS GVI YILL G PPF+ ETE +F +I EG +FES W +ISESAKD I
Sbjct: 183 PYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFI 242
Query: 185 RKMLDQNPKRRLTAHEVLCHPWI 207
+L+++P R T + L HPWI
Sbjct: 243 CHLLEKDPNERYTCEKALSHPWI 265
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 144/242 (59%), Gaps = 2/242 (0%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
L +H ++VR+HD+ ++ ++V +L GGELF+ IV + YSE +A+ ++ I+ V
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE-VFSDVVGSPYYVAPEVL 122
CH G+ HRDLKPEN L S + AA+K DFGL++ + D+ + G+P Y++PEVL
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 123 RKH-YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
RK YG D+W+ GVILYILL G PPFW E + +++QI G DF S W ++ AK
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLKHFSAMNKLKKMALR 241
DLI KML NP +R+TA E L HPWI + LK F+A KLK L
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILT 298
Query: 242 VI 243
+
Sbjct: 299 TM 300
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 194 bits (494), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/240 (44%), Positives = 150/240 (62%), Gaps = 4/240 (1%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++++ + +E + + +V+EL GGELFDRIV+KG YSER+AA +K I+ V H
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHE 166
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRK-H 125
G+ HRDLKPEN L+ + DA LK DFGLS + + V G+P Y APE+LR
Sbjct: 167 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCA 226
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAET-EIGIFRQILEGKIDFESEPWPNISESAKDLI 184
YGPE D+WS G+I YILL G PF+ E + +FR+IL + F S W +S +AKDL+
Sbjct: 227 YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLV 286
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLKHFSAMNKLKKMALRVIA 244
RK++ +PK+RLT + L HPW V K A +D+A +L+ F+A KLK V+A
Sbjct: 287 RKLIVLDPKKRLTTFQALQHPW-VTGKAANFVHMDTA-QKKLQEFNARRKLKAAVKAVVA 344
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 147/247 (59%), Gaps = 2/247 (0%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
L +H ++VR+HD+ ++ +++ +L GGELF+ IV + YSE +A+ ++ I+ V
Sbjct: 66 LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 125
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE-VFSDVVGSPYYVAPEVL 122
CH +GV HR+LKPEN L S + AA+K DFGL++ + ++ + G+P Y++PEVL
Sbjct: 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL 185
Query: 123 RK-HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
RK YG D+W+ GVILYILL G PPFW E + +++QI G DF S W ++ AK
Sbjct: 186 RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 245
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLKHFSAMNKLKKMALR 241
DLI KML NP +R+TA E L HPWI + LK F+A KLK L
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILT 305
Query: 242 VIAERLN 248
V+ N
Sbjct: 306 VMLATRN 312
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 143/235 (60%), Gaps = 2/235 (0%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
L +H ++VR+HD+ ++ +++ +L GGELF+ IV + YSE +A+ ++ I+ V
Sbjct: 77 LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 136
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE-VFSDVVGSPYYVAPEVL 122
CH +GV HRDLKPEN L S + AA+K DFGL++ + ++ + G+P Y++PEVL
Sbjct: 137 CHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL 196
Query: 123 RKH-YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
RK YG D+W+ GVILYILL G PPFW E + +++QI G DF S W ++ AK
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 256
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLKHFSAMNKLK 236
DLI KML NP +R+TA E L HPWI + LK F+A KLK
Sbjct: 257 DLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 311
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 145/249 (58%), Gaps = 1/249 (0%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H ++VR+HD+ +++S ++V +L GGELF+ IV + YSE +A+ ++ I+ + CH
Sbjct: 86 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 145
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
S G+ HR+LKPEN L S + AA+K DFGL++ E + G+P Y++PEVL+K
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 205
Query: 126 -YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
Y D+W+ GVILYILL G PPFW E + ++ QI G D+ S W ++ AK LI
Sbjct: 206 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 265
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLKHFSAMNKLKKMALRVIA 244
ML NPK+R+TA + L PWI + + + LK F+A KLK L +
Sbjct: 266 DSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTMI 325
Query: 245 ERLNEEEIG 253
N +G
Sbjct: 326 ATRNLSNLG 334
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 130/203 (64%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +++++++ +EDK ++VME+ GGELFD I+ + +SE +AA +MK ++ H
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 138
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
+ HRDLKPEN L S DA +K DFGLS ++ + +G+ YY+APEVLRK
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKK 198
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
Y + DVWS GVILYILL G PPF +T+ I +++ +GK F+ W +S+ AK L++
Sbjct: 199 YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVK 258
Query: 186 KMLDQNPKRRLTAHEVLCHPWIV 208
ML P +R++A E L HPWIV
Sbjct: 259 LMLTYEPSKRISAEEALNHPWIV 281
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/202 (43%), Positives = 130/202 (64%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +++++++ +EDK ++V E+ GGELFD I+ + +SE +AA++++ ++ + H
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH 149
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
+ HRDLKPEN L S +DA ++ DFGLS ++ + D +G+ YY+APEVL
Sbjct: 150 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 209
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
Y + DVWS GVILYILLSG PPF E I +++ +GK FE W +SESAKDLIR
Sbjct: 210 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 269
Query: 186 KMLDQNPKRRLTAHEVLCHPWI 207
KML P R++A + L H WI
Sbjct: 270 KMLTYVPSMRISARDALDHEWI 291
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 181 bits (459), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 130/205 (63%), Gaps = 1/205 (0%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H ++VR+HD+ +++S ++V +L GGELF+ IV + YSE +A+ ++ I+ + CH
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
S G+ HR+LKPEN L S + AA+K DFGL++ E + G+P Y++PEVL+K
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 126 -YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
Y D+W+ GVILYILL G PPFW E + ++ QI G D+ S W ++ AK LI
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 242
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVD 209
ML NPK+R+TA + L PWI +
Sbjct: 243 DSMLTVNPKKRITADQALKVPWICN 267
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 130/205 (63%), Gaps = 1/205 (0%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H ++VR+HD+ +++S ++V +L GGELF+ IV + YSE +A+ ++ I+ + CH
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
S G+ HR+LKPEN L S + AA+K DFGL++ E + G+P Y++PEVL+K
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 126 -YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
Y D+W+ GVILYILL G PPFW E + ++ QI G D+ S W ++ AK LI
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 242
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVD 209
ML NPK+R+TA + L PWI +
Sbjct: 243 DSMLTVNPKKRITADQALKVPWICN 267
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 141/242 (58%), Gaps = 2/242 (0%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
L +H ++VR+HD+ ++ ++V +L GGELF+ IV + YSE +A+ + I+ V
Sbjct: 86 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNH 145
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE-VFSDVVGSPYYVAPEVL 122
H + HRDLKPEN L S + AA+K DFGL++ + ++ + G+P Y++PEVL
Sbjct: 146 IHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVL 205
Query: 123 RKH-YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
RK YG D+W+ GVILYILL G PPFW E + +++QI G DF S W ++ AK
Sbjct: 206 RKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 265
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLKHFSAMNKLKKMALR 241
+LI +ML NP +R+TA + L HPW+ + L+ F+A KLK L
Sbjct: 266 NLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILT 325
Query: 242 VI 243
+
Sbjct: 326 TM 327
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 130/205 (63%), Gaps = 1/205 (0%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H ++VR+HD+ +++S ++V +L GGELF+ IV + YSE +A+ ++ I+ + CH
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 121
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
S G+ HR+LKPEN L S + AA+K DFGL++ E + G+P Y++PEVL+K
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 181
Query: 126 -YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
Y D+W+ GVILYILL G PPFW E + ++ QI G D+ S W ++ AK LI
Sbjct: 182 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 241
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVD 209
ML NPK+R+TA + L PWI +
Sbjct: 242 DSMLTVNPKKRITADQALKVPWICN 266
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 137/224 (61%), Gaps = 12/224 (5%)
Query: 9 HVVRIHDTYED----KSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIVGVVE 62
H+V I D YE+ K C+ I+ME EGGELF RI ++G+ ++EREAA++M+ I ++
Sbjct: 83 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 142
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL 122
HS + HRD+KPEN L+ S ++DA LK TDFG + + + + +PYYVAPEVL
Sbjct: 143 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY-TPYYVAPEVL 201
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAET----EIGIFRQILEGKIDFESEPWPNIS 177
+ Y D+WS GVI+YILL G PPF++ T G+ R+I G+ F + W +S
Sbjct: 202 GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVS 261
Query: 178 ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA 221
E AK LIR +L +P RLT + + HPWI V P PL +A
Sbjct: 262 EDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 305
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 137/224 (61%), Gaps = 12/224 (5%)
Query: 9 HVVRIHDTYED----KSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIVGVVE 62
H+V I D YE+ K C+ I+ME EGGELF RI ++G+ ++EREAA++M+ I ++
Sbjct: 64 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 123
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL 122
HS + HRD+KPEN L+ S ++DA LK TDFG + + + + +PYYVAPEVL
Sbjct: 124 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY-TPYYVAPEVL 182
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAET----EIGIFRQILEGKIDFESEPWPNIS 177
+ Y D+WS GVI+YILL G PPF++ T G+ R+I G+ F + W +S
Sbjct: 183 GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVS 242
Query: 178 ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA 221
E AK LIR +L +P RLT + + HPWI V P PL +A
Sbjct: 243 EDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 286
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 136/228 (59%), Gaps = 11/228 (4%)
Query: 5 SEHQHVVRIHDTYED----KSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIV 58
S+ H+VRI D YE+ + C+ IVME +GGELF RI +G+ ++EREA+++MK+I
Sbjct: 118 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 177
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVA 118
++ HS+ + HRD+KPEN L+ S +A LK TDFG + + +PYYVA
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 237
Query: 119 PEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEI----GIFRQILEGKIDFESEPW 173
PEVL + Y D+WS GVI+YILL G PPF++ + G+ +I G+ +F + W
Sbjct: 238 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 297
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA 221
+SE K LIR +L P +R+T E + HPWI+ P PL ++
Sbjct: 298 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 345
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 136/228 (59%), Gaps = 11/228 (4%)
Query: 5 SEHQHVVRIHDTYED----KSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIV 58
S+ H+VRI D YE+ + C+ IVME +GGELF RI +G+ ++EREA+++MK+I
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 171
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVA 118
++ HS+ + HRD+KPEN L+ S +A LK TDFG + + +PYYVA
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 231
Query: 119 PEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEI----GIFRQILEGKIDFESEPW 173
PEVL + Y D+WS GVI+YILL G PPF++ + G+ +I G+ +F + W
Sbjct: 232 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 291
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA 221
+SE K LIR +L P +R+T E + HPWI+ P PL ++
Sbjct: 292 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 339
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 137/228 (60%), Gaps = 11/228 (4%)
Query: 5 SEHQHVVRIHDTYED----KSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIV 58
S+ H+VRI D YE+ + C+ IVME +GGELF RI +G+ ++EREA+++MK+I
Sbjct: 66 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVA 118
++ HS+ + HRD+KPEN L+ S +A LK TDFG + ++ +PYYVA
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVA 185
Query: 119 PEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEI----GIFRQILEGKIDFESEPW 173
PEVL + Y D+WS GVI+YILL G PPF++ + G+ +I G+ +F + W
Sbjct: 186 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 245
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA 221
+SE K LIR +L P +R+T E + HPWI+ P PL ++
Sbjct: 246 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 136/228 (59%), Gaps = 11/228 (4%)
Query: 5 SEHQHVVRIHDTYED----KSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIV 58
S+ H+VRI D YE+ + C+ IVME +GGELF RI +G+ ++EREA+++MK+I
Sbjct: 73 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 132
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVA 118
++ HS+ + HRD+KPEN L+ S +A LK TDFG + + +PYYVA
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 192
Query: 119 PEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEI----GIFRQILEGKIDFESEPW 173
PEVL + Y D+WS GVI+YILL G PPF++ + G+ +I G+ +F + W
Sbjct: 193 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 252
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA 221
+SE K LIR +L P +R+T E + HPWI+ P PL ++
Sbjct: 253 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 300
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 136/228 (59%), Gaps = 11/228 (4%)
Query: 5 SEHQHVVRIHDTYED----KSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIV 58
S+ H+VRI D YE+ + C+ IVME +GGELF RI +G+ ++EREA+++MK+I
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVA 118
++ HS+ + HRD+KPEN L+ S +A LK TDFG + + +PYYVA
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 187
Query: 119 PEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEI----GIFRQILEGKIDFESEPW 173
PEVL + Y D+WS GVI+YILL G PPF++ + G+ +I G+ +F + W
Sbjct: 188 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 247
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA 221
+SE K LIR +L P +R+T E + HPWI+ P PL ++
Sbjct: 248 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 295
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 136/228 (59%), Gaps = 11/228 (4%)
Query: 5 SEHQHVVRIHDTYED----KSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIV 58
S+ H+VRI D YE+ + C+ IVME +GGELF RI +G+ ++EREA+++MK+I
Sbjct: 72 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 131
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVA 118
++ HS+ + HRD+KPEN L+ S +A LK TDFG + + +PYYVA
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 191
Query: 119 PEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEI----GIFRQILEGKIDFESEPW 173
PEVL + Y D+WS GVI+YILL G PPF++ + G+ +I G+ +F + W
Sbjct: 192 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 251
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA 221
+SE K LIR +L P +R+T E + HPWI+ P PL ++
Sbjct: 252 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 299
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 136/228 (59%), Gaps = 11/228 (4%)
Query: 5 SEHQHVVRIHDTYED----KSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIV 58
S+ H+VRI D YE+ + C+ IVME +GGELF RI +G+ ++EREA+++MK+I
Sbjct: 82 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 141
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVA 118
++ HS+ + HRD+KPEN L+ S +A LK TDFG + + +PYYVA
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 201
Query: 119 PEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEI----GIFRQILEGKIDFESEPW 173
PEVL + Y D+WS GVI+YILL G PPF++ + G+ +I G+ +F + W
Sbjct: 202 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 261
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA 221
+SE K LIR +L P +R+T E + HPWI+ P PL ++
Sbjct: 262 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 309
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 136/228 (59%), Gaps = 11/228 (4%)
Query: 5 SEHQHVVRIHDTYED----KSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIV 58
S+ H+VRI D YE+ + C+ IVME +GGELF RI +G+ ++EREA+++MK+I
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVA 118
++ HS+ + HRD+KPEN L+ S +A LK TDFG + + +PYYVA
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 187
Query: 119 PEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEI----GIFRQILEGKIDFESEPW 173
PEVL + Y D+WS GVI+YILL G PPF++ + G+ +I G+ +F + W
Sbjct: 188 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 247
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA 221
+SE K LIR +L P +R+T E + HPWI+ P PL ++
Sbjct: 248 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 295
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 136/228 (59%), Gaps = 11/228 (4%)
Query: 5 SEHQHVVRIHDTYED----KSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIV 58
S+ H+VRI D YE+ + C+ IVME +GGELF RI +G+ ++EREA+++MK+I
Sbjct: 66 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVA 118
++ HS+ + HRD+KPEN L+ S +A LK TDFG + + +PYYVA
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 185
Query: 119 PEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEI----GIFRQILEGKIDFESEPW 173
PEVL + Y D+WS GVI+YILL G PPF++ + G+ +I G+ +F + W
Sbjct: 186 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 245
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA 221
+SE K LIR +L P +R+T E + HPWI+ P PL ++
Sbjct: 246 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 136/228 (59%), Gaps = 11/228 (4%)
Query: 5 SEHQHVVRIHDTYED----KSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIV 58
S+ H+VRI D YE+ + C+ IVME +GGELF RI +G+ ++EREA+++MK+I
Sbjct: 74 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 133
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVA 118
++ HS+ + HRD+KPEN L+ S +A LK TDFG + + +PYYVA
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 193
Query: 119 PEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEI----GIFRQILEGKIDFESEPW 173
PEVL + Y D+WS GVI+YILL G PPF++ + G+ +I G+ +F + W
Sbjct: 194 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 253
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA 221
+SE K LIR +L P +R+T E + HPWI+ P PL ++
Sbjct: 254 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 301
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 136/228 (59%), Gaps = 11/228 (4%)
Query: 5 SEHQHVVRIHDTYED----KSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIV 58
S+ H+VRI D YE+ + C+ IVME +GGELF RI +G+ ++EREA+++MK+I
Sbjct: 67 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 126
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVA 118
++ HS+ + HRD+KPEN L+ S +A LK TDFG + + +PYYVA
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 186
Query: 119 PEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEI----GIFRQILEGKIDFESEPW 173
PEVL + Y D+WS GVI+YILL G PPF++ + G+ +I G+ +F + W
Sbjct: 187 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 246
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA 221
+SE K LIR +L P +R+T E + HPWI+ P PL ++
Sbjct: 247 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 294
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 127/213 (59%), Gaps = 10/213 (4%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+ +S H +++++ DTYE + +V +L + GELFD + +K SE+E K+M+ ++ V
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 123
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE 120
+ H L + HRDLKPEN L +D+D +K TDFG S P E +V G+P Y+APE
Sbjct: 124 ICALHKLNIVHRDLKPENIL---LDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 180
Query: 121 VLR-------KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPW 173
++ YG E D+WS GVI+Y LL+G PPFW ++ + R I+ G F S W
Sbjct: 181 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEW 240
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
+ S++ KDL+ + L P++R TA E L HP+
Sbjct: 241 DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 273
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 127/213 (59%), Gaps = 10/213 (4%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+ +S H +++++ DTYE + +V +L + GELFD + +K SE+E K+M+ ++ V
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE 120
+ H L + HRDLKPEN L +D+D +K TDFG S P E +V G+P Y+APE
Sbjct: 137 ICALHKLNIVHRDLKPENIL---LDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 193
Query: 121 VL-------RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPW 173
++ YG E D+WS GVI+Y LL+G PPFW ++ + R I+ G F S W
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEW 253
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
+ S++ KDL+ + L P++R TA E L HP+
Sbjct: 254 DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 286
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 126/213 (59%), Gaps = 10/213 (4%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+ +S H +++++ DTYE + +V +L + GELFD + +K SE+E K+M+ ++ V
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE 120
+ H L + HRDLKPEN L +D+D +K TDFG S P E V G+P Y+APE
Sbjct: 137 ICALHKLNIVHRDLKPENIL---LDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPE 193
Query: 121 VL-------RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPW 173
++ YG E D+WS GVI+Y LL+G PPFW ++ + R I+ G F S W
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEW 253
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
+ S++ KDL+ + L P++R TA E L HP+
Sbjct: 254 DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 286
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 130/214 (60%), Gaps = 10/214 (4%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+ ++ H H++ + D+YE S + +V +L GELFD + +K SE+E +M++++
Sbjct: 153 LRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEA 212
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE 120
V H+ + HRDLKPEN L +D++ ++ +DFG S +P E ++ G+P Y+APE
Sbjct: 213 VSFLHANNIVHRDLKPENIL---LDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPE 269
Query: 121 VLR-------KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPW 173
+L+ YG E D+W+ GVIL+ LL+G PPFW +I + R I+EG+ F S W
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEW 329
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ S + KDLI ++L +P+ RLTA + L HP+
Sbjct: 330 DDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 145/249 (58%), Gaps = 9/249 (3%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGN----YSEREAAKLMKTIV 58
H+ +H H+V + +TY +++V E +G +L IVK+ + YSE A+ M+ I+
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYV 117
+ CH + HRD+KPEN L S + A +K DFG+++ + V VG+P+++
Sbjct: 141 EALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFM 200
Query: 118 APEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNI 176
APEV+ R+ YG DVW GVIL+ILLSG PF+ E +F I++GK W +I
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHI 259
Query: 177 SESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD-DKVAPDKPLDSAVLSRLKHFSAMNKL 235
SESAKDL+R+ML +P R+T +E L HPW+ + D+ A L V +L+ F+A KL
Sbjct: 260 SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETV-EQLRKFNARRKL 318
Query: 236 KKMALRVIA 244
K L ++
Sbjct: 319 KGAVLAAVS 327
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 128/228 (56%), Gaps = 11/228 (4%)
Query: 5 SEHQHVVRIHDTYED----KSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIV 58
S+ H+VRI D YE+ + C+ IV E +GGELF RI +G+ ++EREA+++ K+I
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIG 171
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVA 118
++ HS+ + HRD+KPEN L+ S +A LK TDFG + + +PYYVA
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 231
Query: 119 PEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIF----RQILEGKIDFESEPW 173
PEVL + Y D WS GVI YILL G PPF++ + I +I G+ +F + W
Sbjct: 232 PEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEW 291
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA 221
+SE K LIR +L P +R T E HPWI P PL ++
Sbjct: 292 SEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLHTS 339
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 138/239 (57%), Gaps = 11/239 (4%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +V+ +H+ YE+K+ V +++EL GGELFD + +K + +E EA + +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 66 SLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR- 123
SL + H DLKPEN + L + +K DFGL+ F ++ G+P +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ G EAD+WS GVI YILLSG PF +T+ + +FE E + N S AKD
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDS-AVLSRLKHFSAMNKLKKMALR 241
IR++L ++PK+R+T + L HPWI KP D+ LSR M K KK A R
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWI--------KPKDTQQALSRKASAVNMEKFKKFAAR 302
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 140/250 (56%), Gaps = 19/250 (7%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H ++V++H+ + D+ +VMEL GGELF+RI KK ++SE EA+ +M+ +V V H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAPEVLRKH 125
+GV HRDLKPEN LF +++ +K DFG + PD + + +Y APE+L ++
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQN 184
Query: 126 -YGPEADVWSAGVILYILLSGVPPFWAE-------TEIGIFRQILEGKIDFESEPWPNIS 177
Y D+WS GVILY +LSG PF + + + I ++I +G FE E W N+S
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVS 244
Query: 178 ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPL---------DSAVLSRLK- 227
+ AKDLI+ +L +P +RL + + W+ D PL +AV + +K
Sbjct: 245 QEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKA 304
Query: 228 HFSAMNKLKK 237
F A NK K+
Sbjct: 305 TFHAFNKYKR 314
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 146/263 (55%), Gaps = 27/263 (10%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +++ + D Y+D V++V EL GGEL D+I+++ +SEREA+ ++ TI VE H
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 66 SLGVFHRDLKPENFLFLSVDEDA---ALKATDFGLSVFYKPDEVFSDVVGSPYY----VA 118
S GV HRDLKP N L+ VDE L+ DFG F K + ++ +P Y VA
Sbjct: 139 SQGVVHRDLKPSNILY--VDESGNPECLRICDFG---FAKQLRAENGLLMTPCYTANFVA 193
Query: 119 PEVL-RKHYGPEADVWSAGVILYILLSGVPPFW---AETEIGIFRQILEGKIDFESEPWP 174
PEVL R+ Y D+WS G++LY +L+G PF ++T I +I GK W
Sbjct: 194 PEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWN 253
Query: 175 NISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLK-----HF 229
+SE+AKDL+ KML +P +RLTA +VL HPW+ P L L +K +
Sbjct: 254 TVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQLVKGAMAATY 313
Query: 230 SAMN------KLKKMALRVIAER 246
SA+N +LK + ++A+R
Sbjct: 314 SALNSSKPTPQLKPIESSILAQR 336
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 142/249 (57%), Gaps = 9/249 (3%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGN----YSEREAAKLMKTIV 58
H+ +H H+V + +TY +++V E +G +L IVK+ + YSE A+ M+ I+
Sbjct: 83 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 142
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYV 117
+ CH + HRD+KP L S + A +K FG+++ + V VG+P+++
Sbjct: 143 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFM 202
Query: 118 APEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNI 176
APEV+ R+ YG DVW GVIL+ILLSG PF+ E +F I++GK W +I
Sbjct: 203 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHI 261
Query: 177 SESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD-DKVAPDKPLDSAVLSRLKHFSAMNKL 235
SESAKDL+R+ML +P R+T +E L HPW+ + D+ A L V +L+ F+A KL
Sbjct: 262 SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETV-EQLRKFNARRKL 320
Query: 236 KKMALRVIA 244
K L ++
Sbjct: 321 KGAVLAAVS 329
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 142/249 (57%), Gaps = 9/249 (3%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGN----YSEREAAKLMKTIV 58
H+ +H H+V + +TY +++V E +G +L IVK+ + YSE A+ M+ I+
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYV 117
+ CH + HRD+KP L S + A +K FG+++ + V VG+P+++
Sbjct: 141 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFM 200
Query: 118 APEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNI 176
APEV+ R+ YG DVW GVIL+ILLSG PF+ E +F I++GK W +I
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHI 259
Query: 177 SESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD-DKVAPDKPLDSAVLSRLKHFSAMNKL 235
SESAKDL+R+ML +P R+T +E L HPW+ + D+ A L V +L+ F+A KL
Sbjct: 260 SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETV-EQLRKFNARRKL 318
Query: 236 KKMALRVIA 244
K L ++
Sbjct: 319 KGAVLAAVS 327
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 149/258 (57%), Gaps = 14/258 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +V+ +H+ YE+K+ V +++EL GGELFD + +K + +E EA + +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 66 SLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR- 123
SL + H DLKPEN + L + +K DFGL+ F ++ G+P +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ G EAD+WS GVI YILLSG PF +T+ + +FE E + N S AKD
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDS-AVLSRLKHFSAMNKLKKMALRV 242
IR++L ++PK+R+T + L HPWI KP D+ LSR SA+N ++K
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWI--------KPKDTQQALSR--KASAVN-MEKFKKFA 300
Query: 243 IAERLNEEEIGGLKELFK 260
++ N GGL ++F+
Sbjct: 301 ARKKSNNGSGGGLNDIFE 318
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 125/204 (61%), Gaps = 2/204 (0%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +V+ +H+ YE+K+ V +++EL GGELFD + +K + +E EA + +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 66 SLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR- 123
SL + H DLKPEN + L + +K DFGL+ F ++ G+P +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNY 191
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ G EAD+WS GVI YILLSG PF +T+ + +FE E + N S AKD
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWI 207
IR++L ++PK+R+T + L HPWI
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 138/247 (55%), Gaps = 21/247 (8%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +++ + D Y+D V++V EL GGEL D+I+++ +SEREA+ ++ TI VE H
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 66 SLGVFHRDLKPENFLFLSVDEDA---ALKATDFGLSVFYKPDEVFSDVVGSPYY----VA 118
S GV HRDLKP N L+ VDE L+ DFG F K + ++ +P Y VA
Sbjct: 139 SQGVVHRDLKPSNILY--VDESGNPECLRICDFG---FAKQLRAENGLLMTPCYTANFVA 193
Query: 119 PEVL-RKHYGPEADVWSAGVILYILLSGVPPFW---AETEIGIFRQILEGKIDFESEPWP 174
PEVL R+ Y D+WS G++LY +L+G PF ++T I +I GK W
Sbjct: 194 PEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWN 253
Query: 175 NISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLK-----HF 229
+SE+AKDL+ KML +P +RLTA +VL HPW+ P L L +K +
Sbjct: 254 TVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQLVKGAMAATY 313
Query: 230 SAMNKLK 236
SA+N K
Sbjct: 314 SALNSSK 320
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 125/204 (61%), Gaps = 2/204 (0%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +V+ +H+ YE+K+ V +++EL GGELFD + +K + +E EA + +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 66 SLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR- 123
SL + H DLKPEN + L + +K DFGL+ F ++ G+P +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ G EAD+WS GVI YILLSG PF +T+ + +FE E + N S AKD
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWI 207
IR++L ++PK+R+T + L HPWI
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 125/204 (61%), Gaps = 2/204 (0%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +V+ +H+ YE+K+ V +++EL GGELFD + +K + +E EA + +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 66 SLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR- 123
SL + H DLKPEN + L + +K DFGL+ F ++ G+P +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ G EAD+WS GVI YILLSG PF +T+ + +FE E + N S AKD
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWI 207
IR++L ++PK+R+T + L HPWI
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 125/204 (61%), Gaps = 2/204 (0%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +V+ +H+ YE+K+ V +++EL GGELFD + +K + +E EA + +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 66 SLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR- 123
SL + H DLKPEN + L + +K DFGL+ F ++ G+P +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ G EAD+WS GVI YILLSG PF +T+ + +FE E + N S AKD
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWI 207
IR++L ++PK+R+T + L HPWI
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 125/204 (61%), Gaps = 2/204 (0%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +V+ +H+ YE+K+ V +++EL GGELFD + +K + +E EA + +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 66 SLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR- 123
SL + H DLKPEN + L + +K DFGL+ F ++ G+P +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ G EAD+WS GVI YILLSG PF +T+ + +FE E + N S AKD
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWI 207
IR++L ++PK+R+T + L HPWI
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 136/231 (58%), Gaps = 13/231 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +V+ +H+ YE+K+ V +++EL GGELFD + +K + +E EA + +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 66 SLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR- 123
SL + H DLKPEN + L + +K DFGL+ F ++ G+P +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ G EAD+WS GVI YILLSG PF +T+ + +FE E + N S AKD
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDS-AVLSRLKHFSAMN 233
IR++L ++PK+R+T + L HPWI KP D+ LSR SA+N
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWI--------KPKDTQQALSR--KASAVN 292
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 126/227 (55%), Gaps = 30/227 (13%)
Query: 5 SEHQHVVRIHDTYED----KSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIV 58
S+ H+VRI D YE+ + C+ IVME +GGELF RI +G+ ++EREA+++MK+I
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVA 118
++ HS+ + HRD+KPEN L+ S +A LK TDFG A
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF--------------------A 167
Query: 119 PEVLRKHYGPEADVWSAGVILYILLSGVPPFWAETEI----GIFRQILEGKIDFESEPWP 174
E + Y D+WS GVI+YILL G PPF++ + G+ +I G+ +F + W
Sbjct: 168 KETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 227
Query: 175 NISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA 221
+SE K LIR +L P +R+T E + HPWI+ P PL ++
Sbjct: 228 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 125/204 (61%), Gaps = 2/204 (0%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +V+ +H+ YE+K+ V +++EL GGELFD + +K + +E EA + +K I+ V H
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 66 SLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR- 123
SL + H DLKPEN + L + +K DFGL+ F ++ G+P +VAPE++
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 190
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ G EAD+WS GVI YILLSG PF +T+ + +FE E + N S AKD
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 250
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWI 207
IR++L ++PK+R+T + L HPWI
Sbjct: 251 IRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 125/204 (61%), Gaps = 2/204 (0%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +V+ +H+ YE+K+ V +++EL GGELFD + +K + +E EA + +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 66 SLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR- 123
SL + H DLKPEN + L + +K DFGL+ F ++ G+P +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ G EAD+WS GVI YILLSG PF +T+ + +FE E + N S AKD
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWI 207
IR++L ++PK+R+T + L HPWI
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 125/203 (61%), Gaps = 2/203 (0%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++ +HD +E+K+ V +++EL GGELFD + +K + +E EA + +K I+ V HS
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 126
Query: 67 LGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
+ H DLKPEN + L + + +K DFG++ + F ++ G+P +VAPE++ +
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE 186
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
G EAD+WS GVI YILLSG PF ET+ I DF+ E + N SE AKD I
Sbjct: 187 PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFI 246
Query: 185 RKMLDQNPKRRLTAHEVLCHPWI 207
R++L ++PKRR+T + L H WI
Sbjct: 247 RRLLVKDPKRRMTIAQSLEHSWI 269
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 125/204 (61%), Gaps = 2/204 (0%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +V+ +H+ YE+K+ V +++EL GGELFD + +K + +E EA + +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 66 SLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR- 123
SL + H DLKPEN + L + +K DFGL+ F ++ G+P +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ G EAD+WS GVI YILLSG PF +T+ + +FE E + N S AKD
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWI 207
IR++L ++PK+R+T + L HPWI
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 125/204 (61%), Gaps = 2/204 (0%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +V+ +H+ YE+K+ V +++EL GGELFD + +K + +E EA + +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 66 SLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR- 123
SL + H DLKPEN + L + +K DFGL+ F ++ G+P +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ G EAD+WS GVI YILLSG PF +T+ + +FE E + N S AKD
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWI 207
IR++L ++PK+R+T + L HPWI
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 125/204 (61%), Gaps = 2/204 (0%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +V+ +H+ YE+K+ V +++EL GGELFD + +K + +E EA + +K I+ V H
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 66 SLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR- 123
SL + H DLKPEN + L + +K DFGL+ F ++ G+P +VAPE++
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 190
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ G EAD+WS GVI YILLSG PF +T+ + +FE E + N S AKD
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 250
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWI 207
IR++L ++PK+R+T + L HPWI
Sbjct: 251 IRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 127/211 (60%), Gaps = 4/211 (1%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +V+ +HD YE+++ V +++EL GGELFD + +K + SE EA +K I+ V H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 67 LGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
+ H DLKPEN + L + +K DFGL+ + F ++ G+P +VAPE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
G EAD+WS GVI YILLSG PF +T+ I DF+ E + + SE AKD I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFI 253
Query: 185 RKMLDQNPKRRLTAHEVLCHPWI--VDDKVA 213
RK+L + ++RLT E L HPWI VD++ A
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 124/204 (60%), Gaps = 2/204 (0%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +V+ +H+ YE+K+ V ++ EL GGELFD + +K + +E EA + +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 66 SLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR- 123
SL + H DLKPEN + L + +K DFGL+ F ++ G+P +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ G EAD+WS GVI YILLSG PF +T+ + +FE E + N S AKD
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWI 207
IR++L ++PK+R+T + L HPWI
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 126/211 (59%), Gaps = 4/211 (1%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +V+ +HD YE+++ V +++EL GGELFD + +K + SE EA +K I+ V H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 67 LGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
+ H DLKPEN + L + +K DFGL+ + F ++ G+P +VAPE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
G EAD+WS GVI YILLSG PF +T+ I DF+ E + SE AKD I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFI 253
Query: 185 RKMLDQNPKRRLTAHEVLCHPWI--VDDKVA 213
RK+L + ++RLT E L HPWI VD++ A
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 127/211 (60%), Gaps = 4/211 (1%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +V+ +HD YE+++ V +++EL GGELFD + +K + SE EA +K I+ V H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 67 LGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
+ H DLKPEN + L + +K DFGL+ + F ++ G+P +VAPE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
G EAD+WS GVI YILLSG PF +T+ I DF+ E + + SE AKD I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFI 253
Query: 185 RKMLDQNPKRRLTAHEVLCHPWI--VDDKVA 213
RK+L + ++RLT E L HPWI VD++ A
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 124/203 (61%), Gaps = 2/203 (0%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++ +HD +E+K+ V +++EL GGELFD + +K + +E EA + +K I+ V HS
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 147
Query: 67 LGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
+ H DLKPEN + L + + +K DFG++ + F ++ G+P +VAPE++ +
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE 207
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
G EAD+WS GVI YILLSG PF ET+ I DF+ E + N SE AKD I
Sbjct: 208 PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFI 267
Query: 185 RKMLDQNPKRRLTAHEVLCHPWI 207
R++L ++PKRR+ + L H WI
Sbjct: 268 RRLLVKDPKRRMXIAQSLEHSWI 290
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 127/211 (60%), Gaps = 4/211 (1%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +V+ +HD YE+++ V +++EL GGELFD + +K + SE EA +K I+ V H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 67 LGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
+ H DLKPEN + L + +K DFGL+ + F ++ G+P +VAPE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
G EAD+WS GVI YILLSG PF +T+ I DF+ E + + SE AKD I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFI 253
Query: 185 RKMLDQNPKRRLTAHEVLCHPWI--VDDKVA 213
RK+L + ++RLT E L HPWI VD++ A
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 124/203 (61%), Gaps = 2/203 (0%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++ +HD +E+K+ V +++EL GGELFD + +K + +E EA + +K I+ V HS
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 133
Query: 67 LGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
+ H DLKPEN + L + + +K DFG++ + F ++ G+P +VAPE++ +
Sbjct: 134 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE 193
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
G EAD+WS GVI YILLSG PF ET+ I DF+ E + N SE AKD I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFI 253
Query: 185 RKMLDQNPKRRLTAHEVLCHPWI 207
R++L ++PKRR+ + L H WI
Sbjct: 254 RRLLVKDPKRRMXIAQSLEHSWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 126/211 (59%), Gaps = 4/211 (1%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +V+ +HD YE+++ V +++EL GGELFD + +K + SE EA +K I+ V H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 67 LGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
+ H DLKPEN + L + +K DFGL+ + F ++ G+P +VAPE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
G EAD+WS GVI YILLSG PF +T+ I DF+ E + SE AKD I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFI 253
Query: 185 RKMLDQNPKRRLTAHEVLCHPWI--VDDKVA 213
RK+L + ++RLT E L HPWI VD++ A
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 116/209 (55%), Gaps = 6/209 (2%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++I + + D +IV+EL EGGELFD++V E ++ V+ H
Sbjct: 74 HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL---- 122
G+ HRDLKPEN L S +ED +K TDFG S + + G+P Y+APEVL
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG 192
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWA-ETEIGIFRQILEGKIDFESEPWPNISESAK 181
Y D WS GVIL+I LSG PPF T++ + QI GK +F E W +SE A
Sbjct: 193 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL 252
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
DL++K+L +PK R T E L HPW+ D+
Sbjct: 253 DLVKKLLVVDPKARFTTEEALRHPWLQDE 281
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 116/209 (55%), Gaps = 6/209 (2%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++I + + D +IV+EL EGGELFD++V E ++ V+ H
Sbjct: 74 HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL---- 122
G+ HRDLKPEN L S +ED +K TDFG S + + G+P Y+APEVL
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG 192
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWA-ETEIGIFRQILEGKIDFESEPWPNISESAK 181
Y D WS GVIL+I LSG PPF T++ + QI GK +F E W +SE A
Sbjct: 193 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL 252
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
DL++K+L +PK R T E L HPW+ D+
Sbjct: 253 DLVKKLLVVDPKARFTTEEALRHPWLQDE 281
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 116/209 (55%), Gaps = 6/209 (2%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++I + + D +IV+EL EGGELFD++V E ++ V+ H
Sbjct: 74 HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL---- 122
G+ HRDLKPEN L S +ED +K TDFG S + + G+P Y+APEVL
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG 192
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWA-ETEIGIFRQILEGKIDFESEPWPNISESAK 181
Y D WS GVIL+I LSG PPF T++ + QI GK +F E W +SE A
Sbjct: 193 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL 252
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
DL++K+L +PK R T E L HPW+ D+
Sbjct: 253 DLVKKLLVVDPKARFTTEEALRHPWLQDE 281
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 149/270 (55%), Gaps = 27/270 (10%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
+H +++ + D Y+D V++V EL +GGEL D+I+++ +SEREA+ ++ TI VE
Sbjct: 73 GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYL 132
Query: 65 HSLGVFHRDLKPENFLFLSVDEDA---ALKATDFGLSVFYKPDEVFSDVVGSPYY----V 117
H+ GV HRDLKP N L+ VDE +++ DFG F K + ++ +P Y V
Sbjct: 133 HAQGVVHRDLKPSNILY--VDESGNPESIRICDFG---FAKQLRAENGLLMTPCYTANFV 187
Query: 118 APEVL-RKHYGPEADVWSAGVILYILLSGVPPFWA---ETEIGIFRQILEGKIDFESEPW 173
APEVL R+ Y D+WS GV+LY +L+G PF +T I +I GK W
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYW 247
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRL------K 227
++S++AKDL+ KML +P +RLTA VL HPWIV P L+ L
Sbjct: 248 NSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGAMAA 307
Query: 228 HFSAMNK-----LKKMALRVIAERLNEEEI 252
+SA+N+ L+ + +A+R ++I
Sbjct: 308 TYSALNRNQSPVLEPVGRSTLAQRRGIKKI 337
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 116/209 (55%), Gaps = 6/209 (2%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++I + + D +IV+EL EGGELFD++V E ++ V+ H
Sbjct: 73 HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 131
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL---- 122
G+ HRDLKPEN L S +ED +K TDFG S + + G+P Y+APEVL
Sbjct: 132 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG 191
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWA-ETEIGIFRQILEGKIDFESEPWPNISESAK 181
Y D WS GVIL+I LSG PPF T++ + QI GK +F E W +SE A
Sbjct: 192 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL 251
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
DL++K+L +PK R T E L HPW+ D+
Sbjct: 252 DLVKKLLVVDPKARFTTEEALRHPWLQDE 280
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 116/209 (55%), Gaps = 6/209 (2%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++I + + D +IV+EL EGGELFD++V E ++ V+ H
Sbjct: 80 HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 138
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL---- 122
G+ HRDLKPEN L S +ED +K TDFG S + + G+P Y+APEVL
Sbjct: 139 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG 198
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWA-ETEIGIFRQILEGKIDFESEPWPNISESAK 181
Y D WS GVIL+I LSG PPF T++ + QI GK +F E W +SE A
Sbjct: 199 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL 258
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
DL++K+L +PK R T E L HPW+ D+
Sbjct: 259 DLVKKLLVVDPKARFTTEEALRHPWLQDE 287
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 116/209 (55%), Gaps = 6/209 (2%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++I + + D +IV+EL EGGELFD++V E ++ V+ H
Sbjct: 213 HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 271
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL---- 122
G+ HRDLKPEN L S +ED +K TDFG S + + G+P Y+APEVL
Sbjct: 272 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG 331
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWA-ETEIGIFRQILEGKIDFESEPWPNISESAK 181
Y D WS GVIL+I LSG PPF T++ + QI GK +F E W +SE A
Sbjct: 332 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL 391
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
DL++K+L +PK R T E L HPW+ D+
Sbjct: 392 DLVKKLLVVDPKARFTTEEALRHPWLQDE 420
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 116/209 (55%), Gaps = 6/209 (2%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++I + + D +IV+EL EGGELFD++V E ++ V+ H
Sbjct: 199 HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 257
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL---- 122
G+ HRDLKPEN L S +ED +K TDFG S + + G+P Y+APEVL
Sbjct: 258 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG 317
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWA-ETEIGIFRQILEGKIDFESEPWPNISESAK 181
Y D WS GVIL+I LSG PPF T++ + QI GK +F E W +SE A
Sbjct: 318 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL 377
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
DL++K+L +PK R T E L HPW+ D+
Sbjct: 378 DLVKKLLVVDPKARFTTEEALRHPWLQDE 406
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 133/238 (55%), Gaps = 11/238 (4%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++ +HD YE+++ V +++EL GGELFD + +K + SE EA +K I+ V H+
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 67 LGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
+ H DLKPEN + L + +K DFGL+ + F ++ G+P +VAPE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
G EAD+WS GVI YILLSG PF +T+ I DF+ E + SE AKD I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFI 253
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDS-AVLSRLKHFSAMNKLKKMALR 241
RK+L + ++RLT E L HPWI P+D+ + R + + KK +R
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWIT--------PVDTQQAMVRRESVVNLENFKKQYVR 303
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 147/270 (54%), Gaps = 27/270 (10%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
+H +++ + D Y+D V++V EL +GGEL D+I+++ +SEREA+ ++ TI VE
Sbjct: 73 GQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYL 132
Query: 65 HSLGVFHRDLKPENFLFLSVDEDA---ALKATDFGLSVFYKPDEVFSDVVGSPYY----V 117
H+ GV HRDLKP N L+ VDE +++ DFG F K + ++ +P Y V
Sbjct: 133 HAQGVVHRDLKPSNILY--VDESGNPESIRICDFG---FAKQLRAENGLLXTPCYTANFV 187
Query: 118 APEVL-RKHYGPEADVWSAGVILYILLSGVPPFWA---ETEIGIFRQILEGKIDFESEPW 173
APEVL R+ Y D+WS GV+LY L+G PF +T I +I GK W
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYW 247
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRL------K 227
++S++AKDL+ K L +P +RLTA VL HPWIV P L+ L
Sbjct: 248 NSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGAXAA 307
Query: 228 HFSAMNK-----LKKMALRVIAERLNEEEI 252
+SA+N+ L+ + +A+R ++I
Sbjct: 308 TYSALNRNQSPVLEPVGRSTLAQRRGIKKI 337
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 122/215 (56%), Gaps = 15/215 (6%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
HQH+ +++ E + + +V+E C GGELFD I+ + SE E + + IV V H
Sbjct: 66 RHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH 125
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKP----DEVFSDVVGSPYYVAPEV 121
S G HRDLKPEN LF DE LK DFGL KP D GS Y APE+
Sbjct: 126 SQGYAHRDLKPENLLF---DEYHKLKLIDFGLCA--KPKGNKDYHLQTCCGSLAYAAPEL 180
Query: 122 L--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISES 179
+ + + G EADVWS G++LY+L+ G PF + + ++++I+ GK D W +S S
Sbjct: 181 IQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK--W--LSPS 236
Query: 180 AKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAP 214
+ L+++ML +PK+R++ +L HPWI+ D P
Sbjct: 237 SILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYP 271
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 124/210 (59%), Gaps = 5/210 (2%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKG-NYSEREAAKLMKTIVGVVECC 64
+H ++++++D +E K+ + +VME +GGELFDRI+ + N +E + MK I +
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM 203
Query: 65 HSLGVFHRDLKPENFLFLSVDEDA-ALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR 123
H + + H DLKPEN L V+ DA +K DFGL+ YKP E G+P ++APEV+
Sbjct: 204 HQMYILHLDLKPENIL--CVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVN 261
Query: 124 KHYGP-EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
+ D+WS GVI Y+LLSG+ PF + + IL + D E E + +ISE AK+
Sbjct: 262 YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKE 321
Query: 183 LIRKMLDQNPKRRLTAHEVLCHPWIVDDKV 212
I K+L + R++A E L HPW+ D K+
Sbjct: 322 FISKLLIKEKSWRISASEALKHPWLSDHKL 351
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 124/205 (60%), Gaps = 5/205 (2%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIV----KKGNYSEREAAKLMKTIVGVV 61
+H ++++I + +ED ++IVME CEGGEL +RIV + SE A+LMK ++ +
Sbjct: 78 DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNAL 137
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
HS V H+DLKPEN LF + +K DFGL+ +K DE ++ G+ Y+APEV
Sbjct: 138 AYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV 197
Query: 122 LRKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
++ + D+WSAGV++Y LL+G PF + + ++ + ++ E P ++ A
Sbjct: 198 FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQAV 256
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPW 206
DL+++ML ++P+RR +A +VL H W
Sbjct: 257 DLLKQMLTKDPERRPSAAQVLHHEW 281
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/75 (92%), Positives = 74/75 (98%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+AERL+EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGS+LMESEIKDLMDAADID
Sbjct: 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72
Query: 303 SGTIDYGEFLAATLH 317
SGTIDYGEF+AAT+H
Sbjct: 73 SGTIDYGEFIAATVH 87
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 135/245 (55%), Gaps = 31/245 (12%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ +++++ + + +ED + ++V E +GG + I K+ +++EREA+++++ +
Sbjct: 64 LYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAA 123
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVV--------G 112
++ H+ G+ HRDLKPEN L S ++ + +K DF L K + + + G
Sbjct: 124 LDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCG 183
Query: 113 SPYYVAPEVLR------KHYGPEADVWSAGVILYILLSGVPPF---------WAETEI-- 155
S Y+APEV+ Y D+WS GV+LYI+LSG PPF W E+
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCR 243
Query: 156 ----GIFRQILEGKIDFESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDK 211
+F I EGK +F + W +IS AKDLI K+L ++ K+RL+A +VL HPW+
Sbjct: 244 VCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQ- 302
Query: 212 VAPDK 216
AP+K
Sbjct: 303 -APEK 306
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 127/249 (51%), Gaps = 49/249 (19%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDR---------------IVKKG-------- 43
H ++ R+++ YED+ + +VMELC GG L D+ +VK
Sbjct: 87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 44 ---------------NYSEREA--AKLMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDE 86
++ +RE + +M+ I + H+ G+ HRD+KPENFLF S ++
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF-STNK 205
Query: 87 DAALKATDFGLSV-FYKPDEV----FSDVVGSPYYVAPEVLR---KHYGPEADVWSAGVI 138
+K DFGLS FYK + + G+PY+VAPEVL + YGP+ D WSAGV+
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 139 LYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKMLDQNPKRRLTA 198
L++LL G PF + Q+L K+ FE+ + +S A+DL+ +L++N R A
Sbjct: 266 LHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDA 325
Query: 199 HEVLCHPWI 207
L HPWI
Sbjct: 326 MRALQHPWI 334
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 113/209 (54%), Gaps = 9/209 (4%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
L H H+++++ S + +VME GGELFD I K G E+E+ +L + I+ V+
Sbjct: 72 LFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDY 131
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
CH V HRDLKPEN L +D K DFGLS E GSP Y APEV+
Sbjct: 132 CHRHMVVHRDLKPENVL---LDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVIS 188
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
R + GPE D+WS+GVILY LL G PF + +F++I +G F + + ++ S
Sbjct: 189 GRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI--FYTPQY--LNPSVI 244
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
L++ ML +P +R T ++ H W D
Sbjct: 245 SLLKHMLQVDPMKRATIKDIREHEWFKQD 273
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 112/205 (54%), Gaps = 10/205 (4%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
L H H+++++D + K + +V+E G ELFD IV++ SE+EA + + I+ VE
Sbjct: 69 LLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEY 127
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
CH + HRDLKPEN L +DE +K DFGLS GSP Y APEV+
Sbjct: 128 CHRHKIVHRDLKPENLL---LDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIS 184
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
+ + GPE DVWS GVILY++L PF E+ +F+ I G +S A
Sbjct: 185 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAA 240
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPW 206
LI++ML NP R++ HE++ W
Sbjct: 241 GLIKRMLIVNPLNRISIHEIMQDDW 265
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 112/205 (54%), Gaps = 10/205 (4%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
L H H+++++D + K + +V+E G ELFD IV++ SE+EA + + I+ VE
Sbjct: 70 LLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEY 128
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
CH + HRDLKPEN L +DE +K DFGLS GSP Y APEV+
Sbjct: 129 CHRHKIVHRDLKPENLL---LDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIS 185
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
+ + GPE DVWS GVILY++L PF E+ +F+ I G +S A
Sbjct: 186 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAA 241
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPW 206
LI++ML NP R++ HE++ W
Sbjct: 242 GLIKRMLIVNPLNRISIHEIMQDDW 266
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 112/205 (54%), Gaps = 10/205 (4%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
L H H+++++D + K + +V+E G ELFD IV++ SE+EA + + I+ VE
Sbjct: 60 LLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEY 118
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
CH + HRDLKPEN L +DE +K DFGLS GSP Y APEV+
Sbjct: 119 CHRHKIVHRDLKPENLL---LDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIS 175
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
+ + GPE DVWS GVILY++L PF E+ +F+ I G +S A
Sbjct: 176 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAA 231
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPW 206
LI++ML NP R++ HE++ W
Sbjct: 232 GLIKRMLIVNPLNRISIHEIMQDDW 256
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 112/205 (54%), Gaps = 10/205 (4%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
L H H+++++D + K + +V+E G ELFD IV++ SE+EA + + I+ VE
Sbjct: 64 LLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEY 122
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
CH + HRDLKPEN L +DE +K DFGLS GSP Y APEV+
Sbjct: 123 CHRHKIVHRDLKPENLL---LDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIS 179
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
+ + GPE DVWS GVILY++L PF E+ +F+ I G +S A
Sbjct: 180 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAA 235
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPW 206
LI++ML NP R++ HE++ W
Sbjct: 236 GLIKRMLIVNPLNRISIHEIMQDDW 260
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 109/209 (52%), Gaps = 9/209 (4%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
L H H+++++ + +VME GGELFD I K G E EA +L + I+ V+
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDY 126
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
CH V HRDLKPEN L +D K DFGLS E D GSP Y APEV+
Sbjct: 127 CHRHMVVHRDLKPENVL---LDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVIS 183
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
R + GPE D+WS GVILY LL G PF E +F++I G + + E ++ S
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI-RGGVFYIPE---YLNRSVA 239
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
L+ ML +P +R T ++ H W D
Sbjct: 240 TLLMHMLQVDPLKRATIKDIREHEWFKQD 268
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 108/209 (51%), Gaps = 9/209 (4%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
L H H+++++ + +VME GGELFD I K G E EA +L + I+ V+
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDY 126
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
CH V HRDLKPEN L +D K DFGLS E GSP Y APEV+
Sbjct: 127 CHRHMVVHRDLKPENVL---LDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVIS 183
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
R + GPE D+WS GVILY LL G PF E +F++I G + + E ++ S
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI-RGGVFYIPE---YLNRSVA 239
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
L+ ML +P +R T ++ H W D
Sbjct: 240 TLLMHMLQVDPLKRATIKDIREHEWFKQD 268
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 12/206 (5%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
L H H+++++D + + +V+E GGELFD IV+K +E E + + I+ +E
Sbjct: 65 LLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEY 123
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
CH + HRDLKPEN L +D++ +K DFGLS GSP Y APEV+
Sbjct: 124 CHRHKIVHRDLKPENLL---LDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIN 180
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESA 180
+ + GPE DVWS G++LY++L G PF E +F+ K++ P+ +S A
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK-----KVNSCVYVMPDFLSPGA 235
Query: 181 KDLIRKMLDQNPKRRLTAHEVLCHPW 206
+ LIR+M+ +P +R+T E+ PW
Sbjct: 236 QSLIRRMIVADPMQRITIQEIRRDPW 261
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 136/269 (50%), Gaps = 26/269 (9%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKG-NYSEREAAKLMKTIVGVVECCH 65
H ++ +HD +EDK + +++E GGELFDRI + SE E M+ ++ H
Sbjct: 107 HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH 166
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL-RK 124
+ H D+KPEN + + +++K DFGL+ PDE+ + + APE++ R+
Sbjct: 167 EHSIVHLDIKPENIM-CETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDRE 225
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
G D+W+ GV+ Y+LLSG+ PF E ++ + + +F+ + + ++S AKD I
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFI 285
Query: 185 RKMLDQNPKRRLTAHEVLCHPWI----------------------VDDKVAPDKPLDSAV 222
+ +L + P++RLT H+ L HPW+ + +K A D P
Sbjct: 286 KNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYA-DWPAPQPA 344
Query: 223 LSRLKHFSAMNKLKKMALRVIAERLNEEE 251
+ R+ +FS++ K + ++ + +E
Sbjct: 345 IGRIANFSSLRKHRPQEYQIYDSYFDRKE 373
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 117/214 (54%), Gaps = 13/214 (6%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H ++V++ + E + +++VME GGE+FD +V G E+EA + IV V+ CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL--RK 124
+ HRDLK EN L +D D +K DFG S + + GSP Y APE+ +K
Sbjct: 132 KFIVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKK 188
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
+ GPE DVWS GVILY L+SG PF + + ++L GK P+ +S ++L+
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLL 244
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIV----DDKVAP 214
+K L NP +R T +++ W+ DD++ P
Sbjct: 245 KKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 116/214 (54%), Gaps = 13/214 (6%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H ++V++ + E + +++VME GGE+FD +V G E+EA + IV V+ CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL--RK 124
+ HRDLK EN L +D D +K DFG S + GSP Y APE+ +K
Sbjct: 132 KFIVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
+ GPE DVWS GVILY L+SG PF + + ++L GK P+ +S ++L+
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLL 244
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIV----DDKVAP 214
+K L NP +R T +++ W+ DD++ P
Sbjct: 245 KKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 116/214 (54%), Gaps = 13/214 (6%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H ++V++ + E + +++VME GGE+FD +V G E+EA + IV V+ CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL--RK 124
+ HRDLK EN L +D D +K DFG S + GSP Y APE+ +K
Sbjct: 132 KFIVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
+ GPE DVWS GVILY L+SG PF + + ++L GK P+ +S ++L+
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLL 244
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIV----DDKVAP 214
+K L NP +R T +++ W+ DD++ P
Sbjct: 245 KKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 116/214 (54%), Gaps = 13/214 (6%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H ++V++ + E + +++VME GGE+FD +V G E+EA + IV V+ CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL--RK 124
+ HRDLK EN L +D D +K DFG S + GSP Y APE+ +K
Sbjct: 132 KFIVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
+ GPE DVWS GVILY L+SG PF + + ++L GK P+ +S ++L+
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLL 244
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIV----DDKVAP 214
+K L NP +R T +++ W+ DD++ P
Sbjct: 245 KKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 111/203 (54%), Gaps = 9/203 (4%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H ++V++ + E + ++++ME GGE+FD +V G E+EA + IV V+ CH
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL--RK 124
+ HRDLK EN L +D D +K DFG S + GSP Y APE+ +K
Sbjct: 130 KRIVHRDLKAENLL---LDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKK 186
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
+ GPE DVWS GVILY L+SG PF + + ++L GK P+ +S ++L+
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLL 242
Query: 185 RKMLDQNPKRRLTAHEVLCHPWI 207
++ L NP +R T +++ WI
Sbjct: 243 KRFLVLNPIKRGTLEQIMKDRWI 265
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 116/214 (54%), Gaps = 13/214 (6%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H ++V++ + E + +++VME GGE+FD +V G E+EA + IV V+ CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL--RK 124
+ HRDLK EN L +D D +K DFG S + G+P Y APE+ +K
Sbjct: 132 KFIVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
+ GPE DVWS GVILY L+SG PF + + ++L GK P+ +S ++L+
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLL 244
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIV----DDKVAP 214
+K L NP +R T +++ W+ DD++ P
Sbjct: 245 KKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 116/214 (54%), Gaps = 13/214 (6%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H ++V++ + E + +++VME GGE+FD +V G E+EA + IV V+ CH
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL--RK 124
+ HRDLK EN L +D D +K DFG S + GSP Y APE+ +K
Sbjct: 125 KFIVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 181
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
+ GPE DVWS GVILY L+SG PF + + ++L GK P+ +S ++L+
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLL 237
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIV----DDKVAP 214
+K L NP +R T +++ W+ DD++ P
Sbjct: 238 KKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 271
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 107/204 (52%), Gaps = 3/204 (1%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGN-YSEREAAKLMKTIVGVVECCH 65
H +V +HD +ED + + ++ E GGELF+++ + N SE EA + M+ + + H
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
H DLKPEN +F + LK DFGL+ P + G+ + APEV K
Sbjct: 167 ENNYVHLDLKPENIMF-TTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 225
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
G D+WS GV+ YILLSG+ PF E + R + + + + ISE KD I
Sbjct: 226 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFI 285
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIV 208
RK+L +P R+T H+ L HPW+
Sbjct: 286 RKLLLADPNTRMTIHQALEHPWLT 309
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 111/203 (54%), Gaps = 9/203 (4%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H ++V++ + E + ++++ME GGE+FD +V G E+EA + IV V+ CH
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL--RK 124
+ HRDLK EN L +D D +K DFG S + G+P Y APE+ +K
Sbjct: 133 KRIVHRDLKAENLL---LDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKK 189
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
+ GPE DVWS GVILY L+SG PF + + ++L GK P+ +S ++L+
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLL 245
Query: 185 RKMLDQNPKRRLTAHEVLCHPWI 207
++ L NP +R T +++ WI
Sbjct: 246 KRFLVLNPIKRGTLEQIMKDRWI 268
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 107/204 (52%), Gaps = 3/204 (1%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGN-YSEREAAKLMKTIVGVVECCH 65
H +V +HD +ED + + ++ E GGELF+++ + N SE EA + M+ + + H
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
H DLKPEN +F + LK DFGL+ P + G+ + APEV K
Sbjct: 273 ENNYVHLDLKPENIMF-TTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 331
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
G D+WS GV+ YILLSG+ PF E + R + + + + ISE KD I
Sbjct: 332 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFI 391
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIV 208
RK+L +P R+T H+ L HPW+
Sbjct: 392 RKLLLADPNTRMTIHQALEHPWLT 415
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 123/232 (53%), Gaps = 32/232 (13%)
Query: 24 HIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFLS 83
++V E GG + I K+ +++E EA+ +++ + ++ H+ G+ HRDLKPEN L
Sbjct: 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEH 146
Query: 84 VDEDAALKATDFGLSVFYKPDEVFSDV--------VGSPYYVAPEVLRKH------YGPE 129
++ + +K DFGL K + S + GS Y+APEV+ Y
Sbjct: 147 PNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKR 206
Query: 130 ADVWSAGVILYILLSGVPPF---------WAETEIG------IFRQILEGKIDFESEPWP 174
D+WS GVILYILLSG PPF W E +F I EGK +F + W
Sbjct: 207 CDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWA 266
Query: 175 NISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA-VLSR 225
+IS +AKDLI K+L ++ K+RL+A +VL HPW+ AP+ L + VL R
Sbjct: 267 HISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV--QGCAPENTLPTPMVLQR 316
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E GE++ + K + E+ A + + + CHS
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P + + G+ Y+ PE++ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 242
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 112/214 (52%), Gaps = 13/214 (6%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H ++V++ + E + +++V E GGE+FD +V G E+EA + IV V+ CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQ 131
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL--RK 124
+ HRDLK EN L +D D +K DFG S + G+P Y APE+ +K
Sbjct: 132 KFIVHRDLKAENLL---LDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
+ GPE DVWS GVILY L+SG PF + + ++L GK P+ S ++L+
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YXSTDCENLL 244
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIV----DDKVAP 214
+K L NP +R T ++ W DD++ P
Sbjct: 245 KKFLILNPSKRGTLEQIXKDRWXNVGHEDDELKP 278
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 122/232 (52%), Gaps = 32/232 (13%)
Query: 24 HIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFLS 83
++V E GG + I K+ +++E EA+ +++ + ++ H+ G+ HRDLKPEN L
Sbjct: 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEH 146
Query: 84 VDEDAALKATDFGLSVFYKPDEVFSDV--------VGSPYYVAPEVLRKH------YGPE 129
++ + +K DF L K + S + GS Y+APEV+ Y
Sbjct: 147 PNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKR 206
Query: 130 ADVWSAGVILYILLSGVPPF---------WAETEIG------IFRQILEGKIDFESEPWP 174
D+WS GVILYILLSG PPF W E +F I EGK +F + W
Sbjct: 207 CDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWA 266
Query: 175 NISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA-VLSR 225
+IS +AKDLI K+L ++ K+RL+A +VL HPW+ AP+ L + VL R
Sbjct: 267 HISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV--QGCAPENTLPTPMVLQR 316
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P +D+ G+ Y+ PE++ +
Sbjct: 128 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRM 183
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 238
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P +D+ G+ Y+ PE++ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 237
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P +D+ G+ Y+ PE++ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRM 187
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 242
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P +D+ G+ Y+ PE++ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 237
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E GE++ + K + E+ A + + + CHS
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P + G+ Y+ PE++ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLXGTLDYLPPEMIEGRM 187
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 242
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P D+ G+ Y+ PE++ +
Sbjct: 153 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDDLCGTLDYLPPEMIEGRM 208
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 263
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 264 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 294
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 113/205 (55%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ +K TDFGL+ K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPEN---LMIDQQGYIKVTDFGLAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 117/212 (55%), Gaps = 11/212 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H +++R++ + D + V++++E G ++ + K + E+ A + + + CH
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
S V HRD+KPEN L S + LK DFG SV + P + + G+ Y+ PE++ +
Sbjct: 130 SKRVIHRDIKPENLLLGS---NGELKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDL 183
+ + D+WS GV+ Y L G+PPF A T +R+I +++F +P+ ++E A+DL
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI--SRVEFT---FPDFVTEGARDL 240
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
I ++L N +RLT EVL HPWI + P
Sbjct: 241 ISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 5/213 (2%)
Query: 2 HHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVV 61
H H ++VR + + + IVME GGELF+RI G +SE EA + ++ V
Sbjct: 68 HRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 127
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
CH++ V HRDLK EN L L LK DFG S VG+P Y+APEV
Sbjct: 128 SYCHAMQVCHRDLKLENTL-LDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 186
Query: 122 -LRKHY-GPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEG--KIDFESEPWPNIS 177
L+K Y G ADVWS GV LY++L G PF E FR+ + + + + +IS
Sbjct: 187 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHIS 246
Query: 178 ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
+ LI ++ +P +R++ E+ H W + +
Sbjct: 247 PECRHLISRIFVADPAKRISIPEIRNHEWFLKN 279
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 5/213 (2%)
Query: 2 HHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVV 61
H H ++VR + + + IVME GGELF+RI G +SE EA + ++ V
Sbjct: 69 HRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
CH++ V HRDLK EN L L LK DFG S VG+P Y+APEV
Sbjct: 129 SYCHAMQVCHRDLKLENTL-LDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 187
Query: 122 -LRKHY-GPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEG--KIDFESEPWPNIS 177
L+K Y G ADVWS GV LY++L G PF E FR+ + + + + +IS
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHIS 247
Query: 178 ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
+ LI ++ +P +R++ E+ H W + +
Sbjct: 248 PECRHLISRIFVADPAKRISIPEIRNHEWFLKN 280
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 11/212 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H +++R++ + D + V++++E G ++ + K + E+ A + + + CH
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
S V HRD+KPEN L S E LK DFG SV + P D+ G+ Y+ PE++ +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDDLCGTLDYLPPEMIEGR 184
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDL 183
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DL
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDL 239
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
I ++L NP +R EVL HPWI + P
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P +++ G+ Y+ PE++ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTELCGTLDYLPPEMIEGRM 182
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 237
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 143
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P + + G+ Y+ PE++ +
Sbjct: 144 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRM 199
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 254
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 255 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 285
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 129/244 (52%), Gaps = 7/244 (2%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKG-NYSEREAAKLMKTIVGVV 61
+++ H++++ +H+++E + ++ E G ++F+RI +ERE + + +
Sbjct: 56 NIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEAL 115
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
+ HS + H D++PEN ++ + +K +FG + KP + F + +P Y APEV
Sbjct: 116 QFLHSHNIGHFDIRPENIIY-QTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV 174
Query: 122 LRKHYGPEA-DVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESA 180
+ A D+WS G ++Y+LLSG+ PF AET I I+ + F+ E + IS A
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEA 234
Query: 181 KDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLKHFSAMNKLKKMAL 240
D + ++L + K R+TA E L HPW+ K+ + + + V+ LKH + L K L
Sbjct: 235 MDFVDRLLVKERKSRMTASEALQHPWL-KQKI---ERVSTKVIRTLKHRRYYHTLIKKDL 290
Query: 241 RVIA 244
++
Sbjct: 291 NMVV 294
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P + + G+ Y+ PE++ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 240
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 11/212 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H +++R++ + D + V++++E G ++ + K + E+ A + + + CH
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
S V HRD+KPEN L S + LK DFG SV + P + G+ Y+ PE++ +
Sbjct: 130 SKRVIHRDIKPENLLLGS---NGELKIADFGWSV-HAPSSRRDTLCGTLDYLPPEMIEGR 185
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDL 183
+ + D+WS GV+ Y L G+PPF A T +R+I +++F +P+ ++E A+DL
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI--SRVEFT---FPDFVTEGARDL 240
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
I ++L N +RLT EVL HPWI + P
Sbjct: 241 ISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 5/213 (2%)
Query: 2 HHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVV 61
H H ++VR + + + IVME GGELF+RI G +SE EA + ++ V
Sbjct: 69 HRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
CH++ V HRDLK EN L L LK FG S D VG+P Y+APEV
Sbjct: 129 SYCHAMQVCHRDLKLENTL-LDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEV 187
Query: 122 -LRKHY-GPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEG--KIDFESEPWPNIS 177
L+K Y G ADVWS GV LY++L G PF E FR+ + + + + +IS
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHIS 247
Query: 178 ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
+ LI ++ +P +R++ E+ H W + +
Sbjct: 248 PECRHLISRIFVADPAKRISIPEIRNHEWFLKN 280
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 149
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +DE ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 150 IYRDLKPENLL---IDEQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNK 204
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 205 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 260
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 261 QVDLTKRFGNLKNGVNDIKNHKWFA 285
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P + + G+ Y+ PE++ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 242
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P + + G+ Y+ PE++ +
Sbjct: 153 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRM 208
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 263
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 264 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 294
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ +K TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPEN---LMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 118/215 (54%), Gaps = 12/215 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H ++ +++ +ED + V++V+E+C GE+ +R +K +SE EA M I+ +
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHFMHQIITGMLY 127
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK-PDEVFSDVVGSPYYVAPEV- 121
HS G+ HRDL N L + + +K DFGL+ K P E + G+P Y++PE+
Sbjct: 128 LHSHGILHRDLTLSNLL---LTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIA 184
Query: 122 LRKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
R +G E+DVWS G + Y LL G PPF +T +++ D+E + +S AK
Sbjct: 185 TRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA--DYEMPSF--LSIEAK 240
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDK 216
DLI ++L +NP RL+ VL HP++ + K
Sbjct: 241 DLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSK 275
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 113/205 (55%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFGL+ K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPEN---LMIDQQGYIQVTDFGLAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ +K TDFG + K + G+P Y+APE +L K Y
Sbjct: 164 IYRDLKPEN---LMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 218
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 274
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P + + G+ Y+ PE++ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRM 182
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 237
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 11/212 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H +++R++ + D + V++++E G ++ + K + E+ A + + + CH
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
S V HRD+KPEN L S E LK DFG SV + P + + G+ Y+ PE++ +
Sbjct: 126 SKKVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDL 183
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DL
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRI--SRVEFT---FPDFVTEGARDL 236
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
I ++L NP +R EVL HPWI + P
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLAGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 11/212 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H +++R++ + D + V++++E G ++ + K + E+ A + + + CH
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
S V HRD+KPEN L S E LK DFG SV + P + + G+ Y+ PE++ +
Sbjct: 130 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDL 183
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DL
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDL 240
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
I ++L NP +R EVL HPWI + P
Sbjct: 241 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 272
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 11/212 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H +++R++ + D + V++++E G ++ + K + E+ A + + + CH
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
S V HRD+KPEN L S E LK DFG SV + P + + G+ Y+ PE++ +
Sbjct: 125 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 180
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDL 183
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DL
Sbjct: 181 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDL 235
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
I ++L NP +R EVL HPWI + P
Sbjct: 236 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 267
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 112/203 (55%), Gaps = 9/203 (4%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H +++R+++ + D+ +++++E GEL+ + K G + E+ +A M+ + + CH
Sbjct: 73 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 132
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
V HRD+KPEN L + LK DFG SV + P + G+ Y+ PE++ K
Sbjct: 133 ERKVIHRDIKPENLL---MGYKGELKIADFGWSV-HAPSLRRRXMCGTLDYLPPEMIEGK 188
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
+ + D+W AGV+ Y L G+PPF + + R+I+ + F P +S+ +KDLI
Sbjct: 189 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLI 244
Query: 185 RKMLDQNPKRRLTAHEVLCHPWI 207
K+L +P +RL V+ HPW+
Sbjct: 245 SKLLRYHPPQRLPLKGVMEHPWV 267
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 112/203 (55%), Gaps = 9/203 (4%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H +++R+++ + D+ +++++E GEL+ + K G + E+ +A M+ + + CH
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 131
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
V HRD+KPEN L + LK DFG SV + P + G+ Y+ PE++ K
Sbjct: 132 ERKVIHRDIKPENLL---MGYKGELKIADFGWSV-HAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
+ + D+W AGV+ Y L G+PPF + + R+I+ + F P +S+ +KDLI
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLI 243
Query: 185 RKMLDQNPKRRLTAHEVLCHPWI 207
K+L +P +RL V+ HPW+
Sbjct: 244 SKLLRYHPPQRLPLKGVMEHPWV 266
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 112/203 (55%), Gaps = 9/203 (4%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H +++R+++ + D+ +++++E GEL+ + K G + E+ +A M+ + + CH
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 131
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
V HRD+KPEN L + LK DFG SV + P + G+ Y+ PE++ K
Sbjct: 132 ERKVIHRDIKPENLL---MGYKGELKIADFGWSV-HAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
+ + D+W AGV+ Y L G+PPF + + R+I+ + F P +S+ +KDLI
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLI 243
Query: 185 RKMLDQNPKRRLTAHEVLCHPWI 207
K+L +P +RL V+ HPW+
Sbjct: 244 SKLLRYHPPQRLPLKGVMEHPWV 266
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P + + G+ Y+ PE++ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGRM 185
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 240
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 164 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 218
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 274
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 275 QVDLTKRFGNLKNGVNDIXNHKWFA 299
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 114/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P + + G+ Y+ PE + +
Sbjct: 132 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEXIEGRX 187
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 242
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 243 SRLLKHNPSQRPXLREVLEHPWITANSSKPS 273
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLXGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 11/212 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H +++R++ + D + V++++E G ++ + K + E+ A + + + CH
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
S V HRD+KPEN L S E LK DFG SV + P + + G+ Y+ PE++ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTXLCGTLDYLPPEMIEGR 181
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDL 183
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DL
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDL 236
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
I ++L NP +R EVL HPWI + P
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 164 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 218
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 274
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 164 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--TLCGTPEYLAPEIILSKGYNK 218
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 274
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKDGVNDIKNHKWFA 298
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKDGVNDIKNHKWFA 298
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 11/212 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H +++R++ + D + V++++E G ++ + K + E+ A + + + CH
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
S V HRD+KPEN L S E LK DFG SV + P + + G+ Y+ PE++ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDL 183
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DL
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDL 236
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
I ++L NP +R EVL HPWI + P
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 148
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 149 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRT--WTLCGTPEYLAPEIILSKGYNK 203
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 204 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 259
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 260 QVDLTKRFGNLKDGVNDIKNHKWFA 284
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 183
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 184 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGATW--TLCGTPEYLAPEIILSKGYNK 238
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 239 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 294
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 295 QVDLTKRFGNLKNGVNDIKNHKWFA 319
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 114/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P + G+ Y+ PE++ +
Sbjct: 128 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDTLCGTLDYLPPEMIEGRM 183
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 238
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 155
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 156 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 210
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 211 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 266
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 267 QVDLTKRFGNLKNGVNDIKNHKWFA 291
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKDGVNDIKNHKWFA 298
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 164 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNK 218
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 274
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 164 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 218
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 274
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 114/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P + G+ Y+ PE++ +
Sbjct: 129 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGRM 184
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 239
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 240 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 270
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLPNGVNDIKNHKWFA 298
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 164 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNK 218
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 274
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKDGVNDIKNHKWFA 298
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPEN---LMIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+ ++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ +K TDFG + K + G+P Y+APE +L K Y
Sbjct: 164 IYRDLKPEN---LMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 218
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 274
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK +FG SV + P + + G+ Y+ PE++ +
Sbjct: 129 KRVIHRDIKPENLLLGSAGE---LKIANFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRM 184
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 239
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 240 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 270
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 183
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 184 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 238
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 239 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 294
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 295 QVDLTKRFGNLKNGVNDIKNHKWFA 319
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+ ++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ +K TDFG + K + G+P Y+APE +L K Y
Sbjct: 164 IYRDLKPEN---LMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 218
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 274
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK +FG SV + P + + G+ Y+ PE++ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIANFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 240
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 11/212 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H +++R++ + D + V++++E G ++ + K + E+ A + + + CH
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
S V HRD+KPEN L S E LK DFG SV + P + G+ Y+ PE++ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGR 181
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDL 183
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DL
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDL 236
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
I ++L NP +R EVL HPWI + P
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G + E A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ +K TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPEN---LMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 114/211 (54%), Gaps = 11/211 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG S + P + + G+ Y+ PE++ +
Sbjct: 128 KRVIHRDIKPENLLLGSAGE---LKIADFGWSC-HAPSSRRTTLSGTLDYLPPEMIEGRM 183
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 238
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
++L NP +R EVL HPWI + P
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 90/161 (55%), Gaps = 5/161 (3%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H ++V++ + E + +++VME GGE+FD +V G E+EA + IV V+ CH
Sbjct: 73 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL--RK 124
+ HRDLK EN L +D D +K DFG S + GSP Y APE+ +K
Sbjct: 133 KYIVHRDLKAENLL---LDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKK 189
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGK 165
+ GPE DVWS GVILY L+SG PF + + ++L GK
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 230
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ +K DFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIKVADFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 114/206 (55%), Gaps = 11/206 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P + + G+ Y+ PE++ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 240
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDD 210
++L NP +R EVL HPWI +
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G ++E A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 108/213 (50%), Gaps = 5/213 (2%)
Query: 2 HHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVV 61
H H ++VR + + + IVME GGELF+RI G +SE EA + ++ V
Sbjct: 69 HRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
CH++ V HRDLK EN L L LK FG S VG+P Y+APEV
Sbjct: 129 SYCHAMQVCHRDLKLENTL-LDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEV 187
Query: 122 -LRKHY-GPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEG--KIDFESEPWPNIS 177
L+K Y G ADVWS GV LY++L G PF E FR+ + + + + +IS
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHIS 247
Query: 178 ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
+ LI ++ +P +R++ E+ H W + +
Sbjct: 248 PECRHLISRIFVADPAKRISIPEIRNHEWFLKN 280
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 114/207 (55%), Gaps = 11/207 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H +++R++ + D + V++++E G ++ + K + E+ A + + + CH
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-K 124
S V HRD+KPEN L S E LK DFG SV + P + + G+ Y+ PE++ +
Sbjct: 123 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 178
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDL 183
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DL
Sbjct: 179 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDL 233
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWIVDD 210
I ++L NP +R EVL HPWI +
Sbjct: 234 ISRLLKHNPSQRPMLREVLEHPWITAN 260
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 108/213 (50%), Gaps = 5/213 (2%)
Query: 2 HHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVV 61
H H ++VR + + + IVME GGELF+RI G +SE EA + ++ V
Sbjct: 69 HRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
H++ V HRDLK EN L L LK DFG S VG+P Y+APEV
Sbjct: 129 SYAHAMQVAHRDLKLENTL-LDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEV 187
Query: 122 -LRKHY-GPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEG--KIDFESEPWPNIS 177
L+K Y G ADVWS GV LY++L G PF E FR+ + + + + +IS
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHIS 247
Query: 178 ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
+ LI ++ +P +R++ E+ H W + +
Sbjct: 248 PECRHLISRIFVADPAKRISIPEIRNHEWFLKN 280
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 104/181 (57%), Gaps = 10/181 (5%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 D 189
Sbjct: 274 Q 274
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G + E A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G + E A IV E HSL +
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 157
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 158 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNK 212
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 213 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 268
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 269 QVDLTKRFGNLKNGVNDIKNHKWFA 293
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G + E A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE ++ K Y
Sbjct: 163 IYRDLKPEN---LIIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIISKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G + E A IV E HSL +
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 183
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 184 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 238
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 239 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 294
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 295 QVDLTKRFGNLKNGVNDIKNHKWFA 319
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G + E A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G + E A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G + E A IV E HSL +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 163
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 164 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNK 218
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 274
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G + E A IV E HSL +
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 155
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 156 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNK 210
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 211 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 266
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 267 QVDLTKRFGNLKNGVNDIKNHKWFA 291
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+AP +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPAIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G + E A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++V+E GGE+F + + G +SE A IV E HSL +
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ +K DFG + K + G+P Y+APE +L K Y
Sbjct: 164 IYRDLKPENLL---IDQQGYIKVADFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 218
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 274
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 113/206 (54%), Gaps = 11/206 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R++ + D + V++++E G ++ + K + E+ A + + + CHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L S E LK DFG SV + P + G+ Y+ PE++ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGRM 185
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESAKDLI 184
+ + D+WS GV+ Y L G PPF A T +++I +++F +P+ ++E A+DLI
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFT---FPDFVTEGARDLI 240
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIVDD 210
++L NP +R EVL HPWI +
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 110/205 (53%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+ ++ +++D S +++VME GGE+F + + G + E A IV E HSL +
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 163
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ +K TDFG + K + G+P Y+APE +L K Y
Sbjct: 164 IYRDLKPEN---LMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 218
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 274
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 111/203 (54%), Gaps = 7/203 (3%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVECCHSL 67
V+ +H+ YE+ S + +++E GGE+F + + SE + +L+K I+ V H
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN 150
Query: 68 GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKHYG 127
+ H DLKP+N L S+ +K DFG+S +++G+P Y+APE+L +Y
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEIL--NYD 208
Query: 128 P---EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
P D+W+ G+I Y+LL+ PF E + I + +D+ E + ++S+ A D I
Sbjct: 209 PITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFI 268
Query: 185 RKMLDQNPKRRLTAHEVLCHPWI 207
+ +L +NP++R TA L H W+
Sbjct: 269 QSLLVKNPEKRPTAEICLSHSWL 291
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GG++F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ +K DFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIKVADFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GG++F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ +K DFG + K + G+P Y+APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIKVADFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V++ +++D S +++VME GGE+F + + G +SE A IV E HSL +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGP 128
+RDLKPEN L +D+ ++ TDFG + K + G+P +APE +L K Y
Sbjct: 163 IYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEALAPEIILSKGYNK 217
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKML 188
D W+ GV++Y + +G PPF+A+ I I+ +I+ GK+ F S + S KDL+R +L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLL 273
Query: 189 DQNPKRRL-----TAHEVLCHPWIV 208
+ +R +++ H W
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 112/213 (52%), Gaps = 15/213 (7%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
M + H ++R+ T++D + ++M+ EGGELF + K + A +
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA 118
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE 120
+E HS + +RDLKPEN L +D++ +K TDFG + Y PD + + G+P Y+APE
Sbjct: 119 LEYLHSKDIIYRDLKPENIL---LDKNGHIKITDFGFAK-YVPDVTYX-LCGTPDYIAPE 173
Query: 121 VLR-KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISES 179
V+ K Y D WS G+++Y +L+G PF+ + + +IL ++ F P +E
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNED 229
Query: 180 AKDLIRKMLDQNPKRRL-----TAHEVLCHPWI 207
KDL+ +++ ++ +RL +V HPW
Sbjct: 230 VKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 262
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 106/213 (49%), Gaps = 5/213 (2%)
Query: 2 HHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVV 61
H H ++VR + + + I+ME GGEL++RI G +SE EA + ++ V
Sbjct: 70 HRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGV 129
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
CHS+ + HRDLK EN L L LK DFG S VG+P Y+APEV
Sbjct: 130 SYCHSMQICHRDLKLENTL-LDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 188
Query: 122 -LRKHY-GPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEG--KIDFESEPWPNIS 177
LR+ Y G ADVWS GV LY++L G PF E +R+ ++ + + IS
Sbjct: 189 LLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRIS 248
Query: 178 ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
LI ++ +P R++ E+ H W + +
Sbjct: 249 PECCHLISRIFVADPATRISIPEIKTHSWFLKN 281
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 116/210 (55%), Gaps = 13/210 (6%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVM--ELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
+H +VV++ + +D + H+ M EL G + + K SE +A + ++ +E
Sbjct: 94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-PLSEDQARFYFQDLIKGIEY 152
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK-PDEVFSDVVGSPYYVAPEVL 122
H + HRD+KP N L V ED +K DFG+S +K D + S+ VG+P ++APE L
Sbjct: 153 LHYQKIIHRDIKPSNLL---VGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESL 209
Query: 123 ---RKHYGPEA-DVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE 178
RK + +A DVW+ GV LY + G PF E + + +I ++F +P +I+E
Sbjct: 210 SETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQP--DIAE 267
Query: 179 SAKDLIRKMLDQNPKRRLTAHEVLCHPWIV 208
KDLI +MLD+NP+ R+ E+ HPW+
Sbjct: 268 DLKDLITRMLDKNPESRIVVPEIKLHPWVT 297
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 11/217 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +++R+++ + D+ +++++E GEL+ + K + E+ A +M+ + + CH
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHG 141
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KH 125
V HRD+KPEN L + LK DFG SV + P + G+ Y+ PE++ +
Sbjct: 142 KKVIHRDIKPEN---LLLGLKGELKIADFGWSV-HAPSLRRKTMCGTLDYLPPEMIEGRM 197
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+ + D+W GV+ Y LL G PPF + + +R+I++ + F + ++ A+DLI
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPA----SVPTGAQDLIS 253
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVDD--KVAPDKPLDS 220
K+L NP RL +V HPW+ + +V P L S
Sbjct: 254 KLLRHNPSERLPLAQVSAHPWVRANSRRVLPPSALQS 290
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 147 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 259
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 260 DLVEKLLVLDATKRLGCEEM 279
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 147 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 259
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 260 DLVEKLLVLDATKRLGCEEM 279
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 72 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 131
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV---VGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 132 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 189 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 244
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 245 DLVEKLLVLDATKRLGCEEM 264
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 151 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 207
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 263
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 264 DLVEKLLVLDATKRLGCEEM 283
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV---VGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 148 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 260
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 261 DLVEKLLVLDATKRLGCEEM 280
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV---VGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 148 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL 204
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 260
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 261 DLVEKLLVLDATKRLGCEEM 280
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV---VGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 150 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 262
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 263 DLVEKLLVLDATKRLGCEEM 282
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV---VGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 148 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 260
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 261 DLVEKLLVLDATKRLGCEEM 280
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 93 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 152
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV---VGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 153 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 209
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 210 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPK----AR 265
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 266 DLVEKLLVLDATKRLGCEEM 285
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV---VGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 148 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 260
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 261 DLVEKLLVLDATKRLGCEEM 280
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 65 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 124
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV---VGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 125 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 182 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 237
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 238 DLVEKLLVLDATKRLGCEEM 257
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV---VGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 150 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 262
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 263 DLVEKLLVLDATKRLGCEEM 282
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV---VGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 151 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 263
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 264 DLVEKLLVLDATKRLGCEEM 283
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 66 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 125
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV---VGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 126 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 182
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 238
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 239 DLVEKLLVLDATKRLGCEEM 258
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV---VGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 150 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 262
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 263 DLVEKLLVLDATKRLGCEEM 282
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 120/220 (54%), Gaps = 23/220 (10%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+ H+ + +V +H ++ ++ +H++++ GGELF + ++ ++E E + IV
Sbjct: 112 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA 171
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEV--FSDVVGSPYYVA 118
+E H LG+ +RD+K EN L +D + + TDFGLS + DE D G+ Y+A
Sbjct: 172 LEHLHKLGIIYRDIKLENIL---LDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMA 228
Query: 119 PEVLR---KHYGPEADVWSAGVILYILLSGVPPFWAETEIG----IFRQILEGKIDFESE 171
P+++R + D WS GV++Y LL+G PF + E I R+IL+ +
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE-----P 283
Query: 172 PWPN-ISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
P+P +S AKDLI+++L ++PK+RL C P D+
Sbjct: 284 PYPQEMSALAKDLIQRLLMKDPKKRLG-----CGPRDADE 318
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 67 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 126
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV---VGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 127 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 183
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 184 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 239
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 240 DLVEKLLVLDATKRLGCEEM 259
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 107/204 (52%), Gaps = 9/204 (4%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+H HQHVV H +ED V +V+ELC L + ++ +E EA ++ IV
Sbjct: 70 IHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLG 129
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAP 119
+ H V HRDLK N LFL +ED +K DFGL+ + D E + G+P Y+AP
Sbjct: 130 CQYLHRNRVIHRDLKLGN-LFL--NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 186
Query: 120 EVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE 178
EVL +K + E DVWS G I+Y LL G PPF + +I + + +I+
Sbjct: 187 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINP 242
Query: 179 SAKDLIRKMLDQNPKRRLTAHEVL 202
A LI+KML +P R T +E+L
Sbjct: 243 VAASLIQKMLQTDPTARPTINELL 266
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 107/204 (52%), Gaps = 9/204 (4%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+H HQHVV H +ED V +V+ELC L + ++ +E EA ++ IV
Sbjct: 70 IHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLG 129
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAP 119
+ H V HRDLK N LFL +ED +K DFGL+ + D E + G+P Y+AP
Sbjct: 130 CQYLHRNRVIHRDLKLGN-LFL--NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 186
Query: 120 EVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE 178
EVL +K + E DVWS G I+Y LL G PPF + +I + + +I+
Sbjct: 187 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINP 242
Query: 179 SAKDLIRKMLDQNPKRRLTAHEVL 202
A LI+KML +P R T +E+L
Sbjct: 243 VAASLIQKMLQTDPTARPTINELL 266
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 107/204 (52%), Gaps = 9/204 (4%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+H HQHVV H +ED V +V+ELC L + ++ +E EA ++ IV
Sbjct: 74 IHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLG 133
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAP 119
+ H V HRDLK N LFL +ED +K DFGL+ + D E + G+P Y+AP
Sbjct: 134 CQYLHRNRVIHRDLKLGN-LFL--NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 190
Query: 120 EVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE 178
EVL +K + E DVWS G I+Y LL G PPF + +I + + +I+
Sbjct: 191 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINP 246
Query: 179 SAKDLIRKMLDQNPKRRLTAHEVL 202
A LI+KML +P R T +E+L
Sbjct: 247 VAASLIQKMLQTDPTARPTINELL 270
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 68 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 127
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV---VGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 128 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 184
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 185 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 240
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 241 DLVEKLLVLDATKRLGCEEM 260
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 107/204 (52%), Gaps = 9/204 (4%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+H HQHVV H +ED V +V+ELC L + ++ +E EA ++ IV
Sbjct: 92 IHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLG 151
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAP 119
+ H V HRDLK N LFL +ED +K DFGL+ + D E + G+P Y+AP
Sbjct: 152 CQYLHRNRVIHRDLKLGN-LFL--NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 208
Query: 120 EVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE 178
EVL +K + E DVWS G I+Y LL G PPF + +I + + +I+
Sbjct: 209 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINP 264
Query: 179 SAKDLIRKMLDQNPKRRLTAHEVL 202
A LI+KML +P R T +E+L
Sbjct: 265 VAASLIQKMLQTDPTARPTINELL 288
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 107/204 (52%), Gaps = 9/204 (4%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+H HQHVV H +ED V +V+ELC L + ++ +E EA ++ IV
Sbjct: 68 IHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLG 127
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAP 119
+ H V HRDLK N LFL +ED +K DFGL+ + D E + G+P Y+AP
Sbjct: 128 CQYLHRNRVIHRDLKLGN-LFL--NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 184
Query: 120 EVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE 178
EVL +K + E DVWS G I+Y LL G PPF + +I + + +I+
Sbjct: 185 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINP 240
Query: 179 SAKDLIRKMLDQNPKRRLTAHEVL 202
A LI+KML +P R T +E+L
Sbjct: 241 VAASLIQKMLQTDPTARPTINELL 264
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 109/200 (54%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV---VGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 150 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF +I++ + DF + +P A+
Sbjct: 207 TEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK----AR 262
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 263 DLVEKLLVLDATKRLGCEEM 282
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 107/204 (52%), Gaps = 9/204 (4%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+H HQHVV H +ED V +V+ELC L + ++ +E EA ++ IV
Sbjct: 94 IHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLG 153
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAP 119
+ H V HRDLK N LFL +ED +K DFGL+ + D E + G+P Y+AP
Sbjct: 154 CQYLHRNRVIHRDLKLGN-LFL--NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 210
Query: 120 EVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE 178
EVL +K + E DVWS G I+Y LL G PPF + +I + + +I+
Sbjct: 211 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINP 266
Query: 179 SAKDLIRKMLDQNPKRRLTAHEVL 202
A LI+KML +P R T +E+L
Sbjct: 267 VAASLIQKMLQTDPTARPTINELL 290
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 109/200 (54%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + GEL I K G++ E IV +E H
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV---VGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 150 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF +I++ + DF + +P A+
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK----AR 262
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 263 DLVEKLLVLDATKRLGCEEM 282
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 109/200 (54%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ T++D ++ + + G L I K G++ E IV +E H
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 150 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 206
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 207 TEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 262
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 263 DLVEKLLVLDATKRLGCEEM 282
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 109/200 (54%), Gaps = 11/200 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H V+++ ++D ++ + + GEL I K G++ E IV +E H
Sbjct: 95 DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 154
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV---VGSPYYVAPEVL 122
G+ HRDLKPEN L ++ED ++ TDFG + P+ + VG+ YV+PE+L
Sbjct: 155 GKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 211
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K +D+W+ G I+Y L++G+PPF A E IF++I++ + DF + +P A+
Sbjct: 212 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 267
Query: 182 DLIRKMLDQNPKRRLTAHEV 201
DL+ K+L + +RL E+
Sbjct: 268 DLVEKLLVLDATKRLGCEEM 287
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 113/204 (55%), Gaps = 7/204 (3%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H++VV ++++Y + +VME EGG L D IV +E + A + ++ + H
Sbjct: 79 QHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLH 137
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVL-R 123
+ GV HRD+K ++ L D +K +DFG K +VG+PY++APE++ R
Sbjct: 138 AQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 194
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
YGPE D+WS G+++ ++ G PP++ E + + I + + + +S S K
Sbjct: 195 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-NLPPRLKNLHKVSPSLKGF 253
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWI 207
+ ++L ++P +R TA E+L HP++
Sbjct: 254 LDRLLVRDPAQRATAAELLKHPFL 277
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 120/219 (54%), Gaps = 23/219 (10%)
Query: 6 EHQHVVRIHDTYEDKS--CVHIVMELCEGGELFDRIVKKGNYSERE------AAKLMKTI 57
+H ++VR +D D++ ++IVME CEGG+L ++ KG ER+ ++M +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGT-KERQYLDEEFVLRVMTQL 120
Query: 58 VGVVECCHSLG-----VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFS-DVV 111
++ CH V HRDLKP N +D +K DFGL+ DE F+ + V
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVF---LDGKQNVKLGDFGLARILNHDEDFAKEFV 177
Query: 112 GSPYYVAPEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFES 170
G+PYY++PE + R Y ++D+WS G +LY L + +PPF A ++ + +I EGK F
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRR 235
Query: 171 EPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
P+ S+ ++I +ML+ R + E+L +P I++
Sbjct: 236 IPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 113/204 (55%), Gaps = 7/204 (3%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H++VV ++++Y + +VME EGG L D IV +E + A + ++ + H
Sbjct: 75 QHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLH 133
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVL-R 123
+ GV HRD+K ++ L D +K +DFG K +VG+PY++APE++ R
Sbjct: 134 AQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 190
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
YGPE D+WS G+++ ++ G PP++ E + + I + + + +S S K
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LPPRLKNLHKVSPSLKGF 249
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWI 207
+ ++L ++P +R TA E+L HP++
Sbjct: 250 LDRLLVRDPAQRATAAELLKHPFL 273
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 113/204 (55%), Gaps = 7/204 (3%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H++VV ++++Y + +VME EGG L D IV +E + A + ++ + H
Sbjct: 86 QHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLH 144
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVL-R 123
+ GV HRD+K ++ L D +K +DFG K +VG+PY++APE++ R
Sbjct: 145 AQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 201
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
YGPE D+WS G+++ ++ G PP++ E + + I + + + +S S K
Sbjct: 202 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LPPRLKNLHKVSPSLKGF 260
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWI 207
+ ++L ++P +R TA E+L HP++
Sbjct: 261 LDRLLVRDPAQRATAAELLKHPFL 284
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 113/204 (55%), Gaps = 7/204 (3%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H++VV ++++Y + +VME EGG L D IV +E + A + ++ + H
Sbjct: 84 QHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLH 142
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVL-R 123
+ GV HRD+K ++ L D +K +DFG K +VG+PY++APE++ R
Sbjct: 143 AQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 199
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
YGPE D+WS G+++ ++ G PP++ E + + I + + + +S S K
Sbjct: 200 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LPPRLKNLHKVSPSLKGF 258
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWI 207
+ ++L ++P +R TA E+L HP++
Sbjct: 259 LDRLLVRDPAQRATAAELLKHPFL 282
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 113/204 (55%), Gaps = 7/204 (3%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H++VV ++++Y + +VME EGG L D IV +E + A + ++ + H
Sbjct: 129 QHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLH 187
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVL-R 123
+ GV HRD+K ++ L D +K +DFG K +VG+PY++APE++ R
Sbjct: 188 AQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 244
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
YGPE D+WS G+++ ++ G PP++ E + + I + + + +S S K
Sbjct: 245 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-NLPPRLKNLHKVSPSLKGF 303
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWI 207
+ ++L ++P +R TA E+L HP++
Sbjct: 304 LDRLLVRDPAQRATAAELLKHPFL 327
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 118/219 (53%), Gaps = 23/219 (10%)
Query: 6 EHQHVVRIHDTYEDKS--CVHIVMELCEGGELFDRIVKKGNYSERE------AAKLMKTI 57
+H ++VR +D D++ ++IVME CEGG+L ++ KG ER+ ++M +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGT-KERQYLDEEFVLRVMTQL 120
Query: 58 VGVVECCHSLG-----VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV-V 111
++ CH V HRDLKP N +D +K DFGL+ D F+ V
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVF---LDGKQNVKLGDFGLARILNHDTSFAKTFV 177
Query: 112 GSPYYVAPEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFES 170
G+PYY++PE + R Y ++D+WS G +LY L + +PPF A ++ + +I EGK F
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRR 235
Query: 171 EPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
P+ S+ ++I +ML+ R + E+L +P I++
Sbjct: 236 IPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 113/205 (55%), Gaps = 7/205 (3%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H++VV ++++Y + +VME EGG L D IV +E + A + ++ + H
Sbjct: 206 QHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLH 264
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVL-R 123
+ GV HRD+K ++ L D +K +DFG K +VG+PY++APE++ R
Sbjct: 265 AQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 321
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
YGPE D+WS G+++ ++ G PP++ E + + I + + + +S S K
Sbjct: 322 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LPPRLKNLHKVSPSLKGF 380
Query: 184 IRKMLDQNPKRRLTAHEVLCHPWIV 208
+ ++L ++P +R TA E+L HP++
Sbjct: 381 LDRLLVRDPAQRATAAELLKHPFLA 405
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 118/219 (53%), Gaps = 23/219 (10%)
Query: 6 EHQHVVRIHDTYEDKS--CVHIVMELCEGGELFDRIVKKGNYSERE------AAKLMKTI 57
+H ++VR +D D++ ++IVME CEGG+L ++ KG ER+ ++M +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGT-KERQYLDEEFVLRVMTQL 120
Query: 58 VGVVECCHSLG-----VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV-V 111
++ CH V HRDLKP N +D +K DFGL+ D F+ V
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVF---LDGKQNVKLGDFGLARILNHDTSFAKAFV 177
Query: 112 GSPYYVAPEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFES 170
G+PYY++PE + R Y ++D+WS G +LY L + +PPF A ++ + +I EGK F
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRR 235
Query: 171 EPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
P+ S+ ++I +ML+ R + E+L +P I++
Sbjct: 236 IPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 108/195 (55%), Gaps = 11/195 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +V++H ++ + ++++++ GG+LF R+ K+ ++E + + + ++ HS
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDEVFSDVVGSPYYVAPEVL-R 123
LG+ +RDLKPEN L +DE+ +K TDFGLS + +S G+ Y+APEV+ R
Sbjct: 145 LGIIYRDLKPENIL---LDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNR 200
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ + AD WS GV+++ +L+G PF + IL+ K+ +S A+ L
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSL 256
Query: 184 IRKMLDQNPKRRLTA 198
+R + +NP RL A
Sbjct: 257 LRMLFKRNPANRLGA 271
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 108/195 (55%), Gaps = 11/195 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +V++H ++ + ++++++ GG+LF R+ K+ ++E + + + ++ HS
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 145
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDEVFSDVVGSPYYVAPEVL-R 123
LG+ +RDLKPEN L +DE+ +K TDFGLS + +S G+ Y+APEV+ R
Sbjct: 146 LGIIYRDLKPENIL---LDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNR 201
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ + AD WS GV+++ +L+G PF + IL+ K+ +S A+ L
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSL 257
Query: 184 IRKMLDQNPKRRLTA 198
+R + +NP RL A
Sbjct: 258 LRMLFKRNPANRLGA 272
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 108/195 (55%), Gaps = 11/195 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +V++H ++ + ++++++ GG+LF R+ K+ ++E + + + ++ HS
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDEVFSDVVGSPYYVAPEVL-R 123
LG+ +RDLKPEN L +DE+ +K TDFGLS + +S G+ Y+APEV+ R
Sbjct: 145 LGIIYRDLKPENIL---LDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNR 200
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ + AD WS GV+++ +L+G PF + IL+ K+ +S A+ L
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSL 256
Query: 184 IRKMLDQNPKRRLTA 198
+R + +NP RL A
Sbjct: 257 LRMLFKRNPANRLGA 271
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 109/204 (53%), Gaps = 9/204 (4%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+H ++ HVV H +ED V++V+E+C L + ++ +E EA M+ +
Sbjct: 95 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAP 119
V+ H+ V HRDLK N LFL+ D D +K DFGL+ + D E D+ G+P Y+AP
Sbjct: 155 VQYLHNNRVIHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKDLCGTPNYIAP 211
Query: 120 EVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE 178
EVL +K + E D+WS G ILY LL G PPF + +I + + +I+
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINP 267
Query: 179 SAKDLIRKMLDQNPKRRLTAHEVL 202
A LIR+ML +P R + E+L
Sbjct: 268 VASALIRRMLHADPTLRPSVAELL 291
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 109/204 (53%), Gaps = 9/204 (4%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+H ++ HVV H +ED V++V+E+C L + ++ +E EA M+ +
Sbjct: 79 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQG 138
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAP 119
V+ H+ V HRDLK N LFL+ D D +K DFGL+ + D E D+ G+P Y+AP
Sbjct: 139 VQYLHNNRVIHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKDLCGTPNYIAP 195
Query: 120 EVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE 178
EVL +K + E D+WS G ILY LL G PPF + +I + + +I+
Sbjct: 196 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINP 251
Query: 179 SAKDLIRKMLDQNPKRRLTAHEVL 202
A LIR+ML +P R + E+L
Sbjct: 252 VASALIRRMLHADPTLRPSVAELL 275
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 118/238 (49%), Gaps = 21/238 (8%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +V +H +++ ++ V++ GGELF + ++ + E A I + H
Sbjct: 97 KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLH 156
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVLRK 124
SL + +RDLKPEN L +D + TDFGL + + S G+P Y+APEVL K
Sbjct: 157 SLNIVYRDLKPENIL---LDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHK 213
Query: 125 H-YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
Y D W G +LY +L G+PPF++ ++ IL + + PNI+ SA+ L
Sbjct: 214 QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHL 269
Query: 184 IRKMLDQNPKRRLTAH----EVLCHPW--------IVDDKVAPDKPLDSAVLSRLKHF 229
+ +L ++ +RL A E+ H + +++ K+ P + + + L+HF
Sbjct: 270 LEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPNVSGPNDLRHF 327
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 112/211 (53%), Gaps = 9/211 (4%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 117 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN 175
APE+L R+ + DVWS G++L +L+G P+ ++ + K + + PW
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLN-PWKK 232
Query: 176 ISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 233 IDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 117 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 230
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 117 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 230
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 117 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 230
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 118 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 231
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 117 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 230
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 56 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 115
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 116 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 172
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 229
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 230 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 262
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 117 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 230
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 117 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 230
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 118 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 174
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 231
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 117 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 230
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 117 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 230
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 118 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 231
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 117 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 230
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 118 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 231
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 118 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 231
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 117 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 230
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 118 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 231
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 118 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 231
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 117 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 230
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
++ + H++VV+ + + + ++ +E C GGELFDRI E +A + ++
Sbjct: 58 INAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPYYV 117
V H +G+ HRD+KPEN L +DE LK +DFGL+ ++ + + + + G+ YV
Sbjct: 118 VVYLHGIGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGI--FRQILEGKIDFESEPW 173
APE+L R+ + DVWS G++L +L+G P W + + E K PW
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYL--NPW 231
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
I + L+ K+L +NP R+T ++ W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 114/212 (53%), Gaps = 19/212 (8%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +VV ++ +Y + ++ME +GG L D IV + +E + A + + ++ + H
Sbjct: 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLH 158
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAPEVL-R 123
+ GV HRD+K ++ L D +K +DFG D +VG+PY++APEV+ R
Sbjct: 159 AQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISR 215
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK-- 181
Y E D+WS G+++ ++ G PP+++++ + +++ P P + S K
Sbjct: 216 SLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL-------RDSPPPKLKNSHKVS 268
Query: 182 ----DLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
D + +ML ++P+ R TA E+L HP+++
Sbjct: 269 PVLRDFLERMLVRDPQERATAQELLDHPFLLQ 300
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 116/218 (53%), Gaps = 12/218 (5%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
+++ ++V D+Y + +VME GG L D +V + E + A + + + +E
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFL 132
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEV-FSDVVGSPYYVAPEVL- 122
HS V HRD+K +N L D ++K TDFG P++ S++VG+PY++APEV+
Sbjct: 133 HSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVT 189
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
RK YGP+ D+WS G++ ++ G PP+ E + I P +S +D
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRD 248
Query: 183 LIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDS 220
+ + LD + ++R +A E+L H ++ K+A KPL S
Sbjct: 249 FLNRCLDMDVEKRGSAKELLQHQFL---KIA--KPLSS 281
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 109/203 (53%), Gaps = 7/203 (3%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H +VV ++ +Y + +VME EGG L D IV +E + A + +++ + H+
Sbjct: 101 HDNVVDMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHN 159
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVL-RK 124
GV HRD+K ++ L S D +K +DFG K +VG+PY++APEV+ R
Sbjct: 160 QGVIHRDIKSDSILLTS---DGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRL 216
Query: 125 HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
YG E D+WS G+++ ++ G PP++ E + R+I + + + +S + +
Sbjct: 217 PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD-SLPPRVKDLHKVSSVLRGFL 275
Query: 185 RKMLDQNPKRRLTAHEVLCHPWI 207
ML + P +R TA E+L HP++
Sbjct: 276 DLMLVREPSQRATAQELLGHPFL 298
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 119/224 (53%), Gaps = 17/224 (7%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
VV++ ++D +++VME GG+L + ++ + E+ A +V ++ HS+G+
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMGL 195
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDV-VGSPYYVAPEVLRK- 124
HRD+KP+N L +D+ LK DFG + K DE V D VG+P Y++PEVL+
Sbjct: 196 IHRDVKPDNML---LDKHGHLKLADFGTCM--KMDETGMVHCDTAVGTPDYISPEVLKSQ 250
Query: 125 ----HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESA 180
+YG E D WS GV L+ +L G PF+A++ +G + +I++ K IS+ A
Sbjct: 251 GGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHA 310
Query: 181 KDLIRKMLDQNPKR--RLTAHEVLCHPWIVDDKVAPDKPLDSAV 222
K+LI L R R E+ HP+ +D+ D ++A
Sbjct: 311 KNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAA 354
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 108/204 (52%), Gaps = 9/204 (4%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+H ++ HVV H +ED V++V+E+C L + ++ +E EA M+ +
Sbjct: 95 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAP 119
V+ H+ V HRDLK N LFL+ D D +K DFGL+ + D E + G+P Y+AP
Sbjct: 155 VQYLHNNRVIHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKTLCGTPNYIAP 211
Query: 120 EVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE 178
EVL +K + E D+WS G ILY LL G PPF + +I + + +I+
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINP 267
Query: 179 SAKDLIRKMLDQNPKRRLTAHEVL 202
A LIR+ML +P R + E+L
Sbjct: 268 VASALIRRMLHADPTLRPSVAELL 291
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 108/195 (55%), Gaps = 11/195 (5%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H VV++H ++ + ++++++ GG+LF R+ K+ ++E + + + ++ HS
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS 148
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDEVFSDVVGSPYYVAPEVL-R 123
LG+ +RDLKPEN L +DE+ +K TDFGLS + +S G+ Y+APEV+ R
Sbjct: 149 LGIIYRDLKPENIL---LDEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTVEYMAPEVVNR 204
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ + AD WS GV+++ +L+G PF + IL+ K+ +S A+ L
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTEAQSL 260
Query: 184 IRKMLDQNPKRRLTA 198
+R + +NP RL +
Sbjct: 261 LRALFKRNPANRLGS 275
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 108/204 (52%), Gaps = 9/204 (4%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+H ++ HVV H +ED V++V+E+C L + ++ +E EA M+ +
Sbjct: 95 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAP 119
V+ H+ V HRDLK N LFL+ D D +K DFGL+ + D E + G+P Y+AP
Sbjct: 155 VQYLHNNRVIHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKXLCGTPNYIAP 211
Query: 120 EVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE 178
EVL +K + E D+WS G ILY LL G PPF + +I + + +I+
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINP 267
Query: 179 SAKDLIRKMLDQNPKRRLTAHEVL 202
A LIR+ML +P R + E+L
Sbjct: 268 VASALIRRMLHADPTLRPSVAELL 291
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 13/213 (6%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
VV++ ++D +++VME GG+L + ++ + E+ A +V ++ HS+G
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGF 194
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDV-VGSPYYVAPEVLRK--- 124
HRD+KP+N L +D+ LK DFG + K V D VG+P Y++PEVL+
Sbjct: 195 IHRDVKPDNML---LDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 251
Query: 125 --HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
+YG E D WS GV LY +L G PF+A++ +G + +I+ K +IS+ AK+
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKN 311
Query: 183 LIRKMLDQNPKR--RLTAHEVLCHPWIVDDKVA 213
LI L R R E+ H + +D+ A
Sbjct: 312 LICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA 344
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 12/218 (5%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
+++ ++V D+Y + +VME GG L D +V + E + A + + + +E
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFL 132
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEV-FSDVVGSPYYVAPEVL- 122
HS V HRD+K +N L D ++K TDFG P++ S +VG+PY++APEV+
Sbjct: 133 HSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT 189
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
RK YGP+ D+WS G++ ++ G PP+ E + I P +S +D
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRD 248
Query: 183 LIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDS 220
+ + LD + ++R +A E+L H ++ K+A KPL S
Sbjct: 249 FLNRCLDMDVEKRGSAKELLQHQFL---KIA--KPLSS 281
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 13/213 (6%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
VV++ ++D +++VME GG+L + ++ + E+ A +V ++ HS+G
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGF 194
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDV-VGSPYYVAPEVLRK--- 124
HRD+KP+N L +D+ LK DFG + K V D VG+P Y++PEVL+
Sbjct: 195 IHRDVKPDNML---LDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 251
Query: 125 --HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
+YG E D WS GV LY +L G PF+A++ +G + +I+ K +IS+ AK+
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKN 311
Query: 183 LIRKMLDQNPKR--RLTAHEVLCHPWIVDDKVA 213
LI L R R E+ H + +D+ A
Sbjct: 312 LICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA 344
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 13/213 (6%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
VV++ ++D +++VME GG+L + ++ + E+ A +V ++ HS+G
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGF 189
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDV-VGSPYYVAPEVLRK--- 124
HRD+KP+N L +D+ LK DFG + K V D VG+P Y++PEVL+
Sbjct: 190 IHRDVKPDNML---LDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 246
Query: 125 --HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
+YG E D WS GV LY +L G PF+A++ +G + +I+ K +IS+ AK+
Sbjct: 247 DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKN 306
Query: 183 LIRKMLDQNPKR--RLTAHEVLCHPWIVDDKVA 213
LI L R R E+ H + +D+ A
Sbjct: 307 LICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA 339
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 14/209 (6%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +V + ++ +++++E GGELF ++ ++G + E A + I + H
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAPEVL-R 123
G+ +RDLKPEN + ++ +K TDFGL D V G+ Y+APE+L R
Sbjct: 139 QKGIIYRDLKPENIM---LNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMR 195
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ D WS G ++Y +L+G PPF E +IL+ K++ P +++ A+DL
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDL 251
Query: 184 IRKMLDQNPKRRLT-----AHEVLCHPWI 207
++K+L +N RL A EV HP+
Sbjct: 252 LKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 14/209 (6%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +V + ++ +++++E GGELF ++ ++G + E A + I + H
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAPEVL-R 123
G+ +RDLKPEN + ++ +K TDFGL D V G+ Y+APE+L R
Sbjct: 139 QKGIIYRDLKPENIM---LNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMR 195
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
+ D WS G ++Y +L+G PPF E +IL+ K++ P +++ A+DL
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDL 251
Query: 184 IRKMLDQNPKRRLT-----AHEVLCHPWI 207
++K+L +N RL A EV HP+
Sbjct: 252 LKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 95/159 (59%), Gaps = 10/159 (6%)
Query: 218 LDSAVLSRLKHFSAMNKLKKMALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKD 277
L S +L LK+F N+LKK+AL +IA+ L + EI L+ +F +D DNSGT++ E+ D
Sbjct: 22 LSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILD 81
Query: 278 GLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKD 337
GLK++G Q + +I ++ D + SG I Y +FLAAT+ ++E L F FFD D
Sbjct: 82 GLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDID 141
Query: 338 ASGYITIDELQHACKEFGISELH-------LDDMIKEID 369
+G I+++EL+ FG ++ +D +++E+D
Sbjct: 142 GNGKISVEELKRI---FGRDDIENPLIDKAIDSLLQEVD 177
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 259 FKMIDTDNSGTITFDELKDGLKR--VGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
FK D D +G I+ +ELK R + + L++ I L+ D++ G ID+ EF+
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFM 190
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 115/218 (52%), Gaps = 12/218 (5%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
+++ ++V D+Y + +VME GG L D +V + E + A + + + +E
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFL 132
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEV-FSDVVGSPYYVAPEVL- 122
HS V HRD+K +N L D ++K TDFG P++ S +VG+PY++APEV+
Sbjct: 133 HSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVT 189
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
RK YGP+ D+WS G++ ++ G PP+ E + I P +S +D
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRD 248
Query: 183 LIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDS 220
+ + L+ + ++R +A E+L H ++ K+A KPL S
Sbjct: 249 FLNRCLEMDVEKRGSAKELLQHQFL---KIA--KPLSS 281
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 115/218 (52%), Gaps = 12/218 (5%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
+++ ++V D+Y + +VME GG L D +V + E + A + + + +E
Sbjct: 75 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFL 133
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEV-FSDVVGSPYYVAPEVL- 122
HS V HRD+K +N L D ++K TDFG P++ S +VG+PY++APEV+
Sbjct: 134 HSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVT 190
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
RK YGP+ D+WS G++ ++ G PP+ E + I P +S +D
Sbjct: 191 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRD 249
Query: 183 LIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDS 220
+ + L+ + ++R +A E++ H ++ K+A KPL S
Sbjct: 250 FLNRCLEMDVEKRGSAKELIQHQFL---KIA--KPLSS 282
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 104/189 (55%), Gaps = 13/189 (6%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKL-MKTIVGVVECCHSLG 68
+ +H ++D + +++VM+ GG+L + K + E A+ + +V ++ H L
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVF--SDVVGSPYYVAPEVL---- 122
HRD+KP+N L +D + ++ DFG + D S VG+P Y++PE+L
Sbjct: 196 YVHRDIKPDNIL---MDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME 252
Query: 123 --RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFE-SEPWPNISES 179
+ YGPE D WS GV +Y +L G PF+AE+ + + +I+ K F+ ++SE+
Sbjct: 253 GGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSEN 312
Query: 180 AKDLIRKML 188
AKDLIR+++
Sbjct: 313 AKDLIRRLI 321
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 135 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 190
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIR 240
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 241 WCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 178 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 233
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIR 283
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 163 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 218
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIR 268
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 136 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 191
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIR 241
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 136 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 191
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIR 241
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 135 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 190
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIR 240
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 241 WCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 131 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIR 236
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 136 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 191
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIR 241
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 178 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 233
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIR 283
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 133
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 134 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 189
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 190 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIR 239
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 240 WCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXG 130
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 131 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIR 236
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 115/218 (52%), Gaps = 12/218 (5%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
+++ ++V D+Y + +VME GG L D +V + E + A + + + +E
Sbjct: 75 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFL 133
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEV-FSDVVGSPYYVAPEVL- 122
HS V HR++K +N L D ++K TDFG P++ S +VG+PY++APEV+
Sbjct: 134 HSNQVIHRNIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT 190
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
RK YGP+ D+WS G++ ++ G PP+ E + I P +S +D
Sbjct: 191 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRD 249
Query: 183 LIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDS 220
+ + L+ + ++R +A E++ H ++ K+A KPL S
Sbjct: 250 FLNRCLEMDVEKRGSAKELIQHQFL---KIA--KPLSS 282
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
+ H + + ++ + VME GGELF + ++ ++E A IV +E
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 126
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAPEVLR 123
HS V +RD+K EN L +D+D +K TDFGL D G+P Y+APEVL
Sbjct: 127 HSRDVVYRDIKLEN---LMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 183
Query: 124 KH-YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
+ YG D W GV++Y ++ G PF+ + +F IL +I F +S AK
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKS 239
Query: 183 LIRKMLDQNPKRRLT-----AHEVLCHPWIV 208
L+ +L ++PK+RL A EV+ H + +
Sbjct: 240 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 270
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 150 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 205
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIR 255
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 256 WCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Query: 19 DKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPEN 78
D+ C VME GGELF + ++ ++E A IV +E HS V +RD+K EN
Sbjct: 81 DRLC--FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLEN 138
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAPEVLRKH-YGPEADVWSAG 136
L +D+D +K TDFGL D G+P Y+APEVL + YG D W G
Sbjct: 139 ---LMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 195
Query: 137 VILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKMLDQNPKRRL 196
V++Y ++ G PF+ + +F IL +I F +S AK L+ +L ++PK+RL
Sbjct: 196 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 251
Query: 197 T-----AHEVLCHPWIV 208
A EV+ H + +
Sbjct: 252 GGGPSDAKEVMEHRFFL 268
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 151 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 206
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIR 256
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 257 WCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
+ H + + ++ + VME GGELF + ++ ++E A IV +E
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAPEVLR 123
HS V +RD+K EN L +D+D +K TDFGL D G+P Y+APEVL
Sbjct: 122 HSRDVVYRDIKLEN---LMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 124 KH-YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
+ YG D W GV++Y ++ G PF+ + +F IL +I F +S AK
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKS 234
Query: 183 LIRKMLDQNPKRRLT-----AHEVLCHPWIV 208
L+ +L ++PK+RL A EV+ H + +
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
+ H + + ++ + VME GGELF + ++ ++E A IV +E
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAPEVLR 123
HS V +RD+K EN L +D+D +K TDFGL D G+P Y+APEVL
Sbjct: 122 HSRDVVYRDIKLEN---LMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 124 KH-YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
+ YG D W GV++Y ++ G PF+ + +F IL +I F +S AK
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKS 234
Query: 183 LIRKMLDQNPKRRLT-----AHEVLCHPWIV 208
L+ +L ++PK+RL A EV+ H + +
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 178 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 233
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIR 283
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 157
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 158 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 213
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 214 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIR 263
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 264 WCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 169
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 170 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 225
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 226 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIR 275
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 276 WCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 150 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 205
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIR 255
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 256 WCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Query: 19 DKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPEN 78
D+ C VME GGELF + ++ ++E A IV +E HS V +RD+K EN
Sbjct: 78 DRLC--FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLEN 135
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAPEVLRKH-YGPEADVWSAG 136
L +D+D +K TDFGL D G+P Y+APEVL + YG D W G
Sbjct: 136 ---LMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 137 VILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKMLDQNPKRRL 196
V++Y ++ G PF+ + +F IL +I F +S AK L+ +L ++PK+RL
Sbjct: 193 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 248
Query: 197 T-----AHEVLCHPWIV 208
A EV+ H + +
Sbjct: 249 GGGPSDAKEVMEHRFFL 265
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 151 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 206
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIR 256
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 257 WCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 182
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 183 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 238
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 239 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIR 288
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 289 WCLALRPSDRPTFEEIQNHPWMQD 312
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
+ H + + ++ + VME GGELF + ++ ++E A IV +E
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAPEVLR 123
HS V +RD+K EN L +D+D +K TDFGL D G+P Y+APEVL
Sbjct: 122 HSRDVVYRDIKLEN---LMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 124 KH-YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
+ YG D W GV++Y ++ G PF+ + +F IL +I F +S AK
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKS 234
Query: 183 LIRKMLDQNPKRRLT-----AHEVLCHPWIV 208
L+ +L ++PK+RL A EV+ H + +
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
+ H + + ++ + VME GGELF + ++ ++E A IV +E
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD-EVFSDVVGSPYYVAPEVLR 123
HS V +RD+K EN L +D+D +K TDFGL D G+P Y+APEVL
Sbjct: 122 HSRDVVYRDIKLEN---LMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 124 KH-YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
+ YG D W GV++Y ++ G PF+ + +F IL +I F +S AK
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKS 234
Query: 183 LIRKMLDQNPKRRLT-----AHEVLCHPWIV 208
L+ +L ++PK+RL A EV+ H + +
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 163 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 218
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIR 268
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 164 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 219
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIR 269
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 131 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIR 236
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 164 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 219
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIR 269
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 151 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 206
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIR 256
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 257 WCLALRPXDRPTFEEIQNHPWMQD 280
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 163 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 218
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIR 268
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 164 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 219
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXECQHLIR 269
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 108/198 (54%), Gaps = 15/198 (7%)
Query: 8 QHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKL-MKTIVGVVECCHS 66
Q + +H ++D++ +++VM+ GG+L + K + + A+ + +V ++ H
Sbjct: 150 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 209
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVF--SDVVGSPYYVAPEVLRK 124
L HRD+KP+N L +D + ++ DFG + D S VG+P Y++PE+L+
Sbjct: 210 LHYVHRDIKPDNVL---LDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 266
Query: 125 ------HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQIL--EGKIDFESEPWPNI 176
YGPE D WS GV +Y +L G PF+AE+ + + +I+ E + F S ++
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHV-TDV 325
Query: 177 SESAKDLIRKMLDQNPKR 194
SE AKDLI++++ +R
Sbjct: 326 SEEAKDLIQRLICSRERR 343
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 108/198 (54%), Gaps = 15/198 (7%)
Query: 8 QHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKL-MKTIVGVVECCHS 66
Q + +H ++D++ +++VM+ GG+L + K + + A+ + +V ++ H
Sbjct: 134 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 193
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVF--SDVVGSPYYVAPEVLRK 124
L HRD+KP+N L +D + ++ DFG + D S VG+P Y++PE+L+
Sbjct: 194 LHYVHRDIKPDNVL---LDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 250
Query: 125 ------HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQIL--EGKIDFESEPWPNI 176
YGPE D WS GV +Y +L G PF+AE+ + + +I+ E + F S ++
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHV-TDV 309
Query: 177 SESAKDLIRKMLDQNPKR 194
SE AKDLI++++ +R
Sbjct: 310 SEEAKDLIQRLICSRERR 327
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 163 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 218
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXECQHLIR 268
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEG-GELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
V+R+ D +E +++E E +LFD I ++G E A ++ V CH+ G
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 69 VFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-- 125
V HRD+K EN L +D + LK DFG K D V++D G+ Y PE +R H
Sbjct: 164 VLHRDIKDENIL---IDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRY 219
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIR 185
+G A VWS G++LY ++ G PF + E I+ G++ F +S + LIR
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXECQHLIR 269
Query: 186 KMLDQNPKRRLTAHEVLCHPWIVD 209
L P R T E+ HPW+ D
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 15/209 (7%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H + ++ ++ + VME GG+L I K + E A I+ + H
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV-VGSPYYVAPEVLRKH 125
G+ +RDLK +N L +D + K DFG+ + V + G+P Y+APE+L++
Sbjct: 143 KGIIYRDLKLDNVL---LDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM 199
Query: 126 -YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLI 184
YGP D W+ GV+LY +L G PF AE E +F IL ++ + + W + E A ++
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--W--LHEDATGIL 255
Query: 185 RKMLDQNPKRRLTA------HEVLCHPWI 207
+ + +NP RL + H +L HP+
Sbjct: 256 KSFMTKNPTMRLGSLTQGGEHAILRHPFF 284
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 20/219 (9%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMEL-CEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H V+R+ D +E + +V+E +LFD I +KG E + +V ++ CH
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCH 156
Query: 66 SLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRK 124
S GV HRD+K EN L +D K DFG DE ++D G+ Y PE + +
Sbjct: 157 SRGVVHRDIKDENIL---IDLRRGCAKLIDFGSGALLH-DEPYTDFDGTRVYSPPEWISR 212
Query: 125 H--YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
H + A VWS G++LY ++ G PF + E ILE ++ F + ++S
Sbjct: 213 HQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFPA----HVSPDCCA 262
Query: 183 LIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSA 221
LIR+ L P R + E+L PW+ A D PL+ +
Sbjct: 263 LIRRCLAPKPSSRPSLEEILLDPWM--QTPAEDVPLNPS 299
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
L + + ++H ++ ++ VME GG+L I + G + E +A I +
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFF 135
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFS-DVVGSPYYVAPEVL 122
H G+ +RDLK +N + +D + +K DFG+ + D V + + G+P Y+APE++
Sbjct: 136 LHKRGIIYRDLKLDNVM---LDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEII 192
Query: 123 R-KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
+ YG D W+ GV+LY +L+G PPF E E +F+ I+E + + ++S+ A
Sbjct: 193 AYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAV 248
Query: 182 DLIRKMLDQNPKRRL 196
+ + ++ ++P +RL
Sbjct: 249 SICKGLMTKHPAKRL 263
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
S H + + +++ + VME GGELF + ++ +SE A IV ++
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 125
Query: 65 HS-LGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVL 122
HS V +RDLK EN L +D+D +K TDFGL K G+P Y+APEVL
Sbjct: 126 HSEKNVVYRDLKLEN---LMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 182
Query: 123 RKH-YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
+ YG D W GV++Y ++ G PF+ + +F IL +I F P AK
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE----AK 238
Query: 182 DLIRKMLDQNPKRRLT-----AHEVLCH 204
L+ +L ++PK+RL A E++ H
Sbjct: 239 SLLSGLLKKDPKQRLGGGSEDAKEIMQH 266
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
S H + + +++ + VME GGELF + ++ +SE A IV ++
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 124
Query: 65 HS-LGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVL 122
HS V +RDLK EN L +D+D +K TDFGL K G+P Y+APEVL
Sbjct: 125 HSEKNVVYRDLKLEN---LMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 181
Query: 123 RKH-YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
+ YG D W GV++Y ++ G PF+ + +F IL +I F P AK
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE----AK 237
Query: 182 DLIRKMLDQNPKRRLT-----AHEVLCH 204
L+ +L ++PK+RL A E++ H
Sbjct: 238 SLLSGLLKKDPKQRLGGGSEDAKEIMQH 265
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
S H + + +++ + VME GGELF + ++ +SE A IV ++
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 126
Query: 65 HS-LGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVL 122
HS V +RDLK EN L +D+D +K TDFGL K G+P Y+APEVL
Sbjct: 127 HSEKNVVYRDLKLEN---LMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 183
Query: 123 RKH-YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
+ YG D W GV++Y ++ G PF+ + +F IL +I F P AK
Sbjct: 184 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE----AK 239
Query: 182 DLIRKMLDQNPKRRLT-----AHEVLCH 204
L+ +L ++PK+RL A E++ H
Sbjct: 240 SLLSGLLKKDPKQRLGGGSEDAKEIMQH 267
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
S H + + +++ + VME GGELF + ++ +SE A IV ++
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 267
Query: 65 HS-LGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVL 122
HS V +RDLK EN L +D+D +K TDFGL K G+P Y+APEVL
Sbjct: 268 HSEKNVVYRDLKLEN---LMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 324
Query: 123 RKH-YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
+ YG D W GV++Y ++ G PF+ + +F IL +I F + AK
Sbjct: 325 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAK 380
Query: 182 DLIRKMLDQNPKRRLT-----AHEVLCH 204
L+ +L ++PK+RL A E++ H
Sbjct: 381 SLLSGLLKKDPKQRLGGGSEDAKEIMQH 408
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 23/212 (10%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
S H +V +H ++ +S + V+E GG+L + ++ E A I +
Sbjct: 110 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 169
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVLR 123
H G+ +RDLK +N L +D + +K TD+G+ +P + S G+P Y+APE+LR
Sbjct: 170 HERGIIYRDLKLDNVL---LDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILR 226
Query: 124 -KHYGPEADVWSAGVILYILLSGVPPF---------WAETEIGIFRQILEGKIDFESEPW 173
+ YG D W+ GV+++ +++G PF TE +F+ ILE +I
Sbjct: 227 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--- 283
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHP 205
++S A +++ L+++PK RL CHP
Sbjct: 284 -SLSVKAASVLKSFLNKDPKERLG-----CHP 309
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
S H + + +++ + VME GGELF + ++ +SE A IV ++
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 264
Query: 65 HS-LGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVL 122
HS V +RDLK EN L +D+D +K TDFGL K G+P Y+APEVL
Sbjct: 265 HSEKNVVYRDLKLEN---LMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 321
Query: 123 RKH-YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
+ YG D W GV++Y ++ G PF+ + +F IL +I F + AK
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAK 377
Query: 182 DLIRKMLDQNPKRRLT-----AHEVLCH 204
L+ +L ++PK+RL A E++ H
Sbjct: 378 SLLSGLLKKDPKQRLGGGSEDAKEIMQH 405
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 23/212 (10%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
S H +V +H ++ +S + V+E GG+L + ++ E A I +
Sbjct: 63 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 122
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVLR 123
H G+ +RDLK +N L +D + +K TD+G+ +P + S G+P Y+APE+LR
Sbjct: 123 HERGIIYRDLKLDNVL---LDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 179
Query: 124 -KHYGPEADVWSAGVILYILLSGVPPF---------WAETEIGIFRQILEGKIDFESEPW 173
+ YG D W+ GV+++ +++G PF TE +F+ ILE +I
Sbjct: 180 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--- 236
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHP 205
++S A +++ L+++PK RL CHP
Sbjct: 237 -SLSVKAASVLKSFLNKDPKERLG-----CHP 262
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 23/212 (10%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
S H +V +H ++ +S + V+E GG+L + ++ E A I +
Sbjct: 67 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 126
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVLR 123
H G+ +RDLK +N L +D + +K TD+G+ +P + S G+P Y+APE+LR
Sbjct: 127 HERGIIYRDLKLDNVL---LDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 183
Query: 124 -KHYGPEADVWSAGVILYILLSGVPPF---------WAETEIGIFRQILEGKIDFESEPW 173
+ YG D W+ GV+++ +++G PF TE +F+ ILE +I
Sbjct: 184 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--- 240
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHP 205
++S A +++ L+++PK RL CHP
Sbjct: 241 -SLSVKAASVLKSFLNKDPKERLG-----CHP 266
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 303 SGTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISEL 359
+GTID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 360 HLDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 EVDEMIREADID 132
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 72 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 129 ADIDGDGQVNYEEFV 143
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 303 SGTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISEL 359
+GTID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 121
Query: 360 HLDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 122 EVDEMIREADID 133
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 73 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 129
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 130 ADIDGDGQVNYEEFV 144
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 303 SGTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISEL 359
+GTID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 360 HLDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 EVDEMIREADID 132
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 72 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 129 ADIDGDGQVNYEEFV 143
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 78/133 (58%), Gaps = 3/133 (2%)
Query: 242 VIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADID 301
+A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D
Sbjct: 3 AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 62
Query: 302 NSGTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISE 358
+GTID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 63 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 122
Query: 359 LHLDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 123 EEVDEMIREADID 135
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 75 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 131
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 132 ADIDGDGQVNYEEFV 146
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 110/201 (54%), Gaps = 10/201 (4%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRI-VKKGN-YSEREAAKLMKTIVGVVEC 63
+H ++V+ +++E+ ++IVM+ CEGG+LF RI +KG + E + I ++
Sbjct: 81 KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKH 140
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVL 122
H + HRD+K +N +FL+ +D ++ DFG++ V E+ +G+PYY++PE+
Sbjct: 141 VHDRKILHRDIKSQN-IFLT--KDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEIC 197
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
K Y ++D+W+ G +LY L + F A + + +I+ G S + S +
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHY---SYDLR 254
Query: 182 DLIRKMLDQNPKRRLTAHEVL 202
L+ ++ +NP+ R + + +L
Sbjct: 255 SLVSQLFKRNPRDRPSVNSIL 275
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 303 SGTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISEL 359
+GTID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 360 HLDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 EVDEMIREADID 132
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 72 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 129 ADIDGDGQVNYEEFV 143
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 303 SGTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISEL 359
+GTID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 360 HLDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 EVDEMIREADID 132
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 72 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 129 ADIDGDGQVNYEEFV 143
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Query: 245 ERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSG 304
++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +G
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 305 TIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHL 361
TID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++ +
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
Query: 362 DDMIKEIDQD 371
D+MI+E D D
Sbjct: 389 DEMIREADID 398
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 338 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 394
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 395 ADIDGDGQVNYEEFV 409
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Query: 245 ERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSG 304
++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +G
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 305 TIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHL 361
TID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++ +
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
Query: 362 DDMIKEIDQD 371
D+MI+E D D
Sbjct: 389 DEMIREADID 398
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 338 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 394
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 395 ADIDGDGQVNYEEFV 409
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Query: 245 ERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSG 304
++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 305 TIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHL 361
TID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++ +
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 362 DDMIKEIDQD 371
D+MI+E D D
Sbjct: 423 DEMIREADID 432
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 372 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 428
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 429 ADIDGDGQVNYEEFV 443
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Query: 245 ERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSG 304
++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 305 TIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHL 361
TID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++ +
Sbjct: 363 TIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 362 DDMIKEIDQD 371
D+MI+E D D
Sbjct: 423 DEMIREADID 432
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 372 MMARWMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 428
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 429 ADIDGDGQVNYEEFV 443
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Query: 245 ERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSG 304
++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 305 TIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHL 361
TID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++ +
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 362 DDMIKEIDQD 371
D+MI+E D D
Sbjct: 423 DEMIREADID 432
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 372 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 428
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 429 ADIDGDGQVNYEEFV 443
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Query: 245 ERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSG 304
++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +G
Sbjct: 266 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 325
Query: 305 TIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHL 361
TID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++ +
Sbjct: 326 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 385
Query: 362 DDMIKEIDQD 371
D+MI+E D D
Sbjct: 386 DEMIREADID 395
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 335 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 391
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 392 ADIDGDGQVNYEEFV 406
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Query: 245 ERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSG 304
++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +G
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 305 TIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHL 361
TID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++ +
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 423
Query: 362 DDMIKEIDQD 371
D+MI+E D D
Sbjct: 424 DEMIREADID 433
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 373 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 429
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 430 ADIDGDGQVNYEEFV 444
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 303 SGTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISEL 359
+GTID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 360 HLDDMIKEIDQD 371
+D MI+E D D
Sbjct: 121 EVDQMIREADID 132
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ ++
Sbjct: 72 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIRE 128
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 129 ADIDGDGQVNYEEFV 143
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Query: 245 ERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSG 304
++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 305 TIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHL 361
TID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++ +
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 362 DDMIKEIDQD 371
D+MI+E D D
Sbjct: 423 DEMIREADID 432
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 372 MMARKMKYTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 428
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 429 ADIDGDGQVNYEEFV 443
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 304 GTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 67 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 126
Query: 361 LDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 127 VDEMIREADID 137
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 77 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 133
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 134 ADIDGDGQVNYEEFV 148
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 361 LDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 VDEMIREADID 131
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 71 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 127
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 128 ADIDGDGQVNYEEFV 142
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 304 GTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 121
Query: 361 LDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 122 VDEMIREADID 132
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G L + E+ +++
Sbjct: 72 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIRE 128
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 129 ADIDGDGQVNYEEFV 143
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 120
Query: 361 LDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 VDEMIREADID 131
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G L + E+ +++
Sbjct: 71 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIRE 127
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 128 ADIDGDGQVNYEEFV 142
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 361 LDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 VDEMIREADID 131
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 71 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 127
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 128 ADIDGDGQVNYEEFV 142
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+ ++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 303 SGTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISEL 359
GTID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 360 HLDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 420 EVDEMIREADID 431
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 371 MMARKMKYTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 427
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 428 ADIDGDGQVNYEEFV 442
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 3/130 (2%)
Query: 245 ERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSG 304
++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D G
Sbjct: 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 353
Query: 305 TIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHL 361
TID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++ +
Sbjct: 354 TIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 413
Query: 362 DDMIKEIDQD 371
D+MI+E D D
Sbjct: 414 DEMIREADID 423
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 363 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 419
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 420 ADIDGDGQVNYEEFV 434
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 79/131 (60%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
AE+L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFLA-ATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTID+ EFL+ + + + EE L+ AF FD+D +G I+ EL+H G +++
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 361 LDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 VDEMIREADID 131
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 241 RVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADI 300
R + E+ +EEE L E FK+ D D +G I+ EL+ + +G +L + E+ +++ ADI
Sbjct: 74 RKMKEQDSEEE---LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADI 130
Query: 301 DNSGTIDYGEFL 312
D G I+Y EF+
Sbjct: 131 DGDGHINYEEFV 142
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+ ++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 303 SGTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISEL 359
GTID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 360 HLDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 420 EVDEMIREADID 431
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 371 MMARKMKYTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 427
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 428 ADIDGDGQVNYEEFV 442
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 36/235 (15%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
+H+++VR+HD + +V E C+ + FD G+ + ++ +
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGF 116
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVL 122
CHS V HRDLKP+N L ++ + LK DFGL+ F P +S V + +Y P+VL
Sbjct: 117 CHSRNVLHRDLKPQNLL---INRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVL 173
Query: 123 --RKHYGPEADVWSAGVILYILLSGVPPFWAETEIG-----IFRQI----------LEGK 165
K Y D+WSAG I L + P + ++ IFR + +
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
Query: 166 IDFESEPW-----------PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
D++ P P ++ + +DL++ +L NP +R++A E L HP+ D
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 3/130 (2%)
Query: 245 ERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSG 304
++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D G
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 305 TIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHL 361
TID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++ +
Sbjct: 362 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 421
Query: 362 DDMIKEIDQD 371
D+MI+E D D
Sbjct: 422 DEMIREADID 431
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 371 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 427
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 428 ADIDGDGQVNYEEFV 442
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 18/203 (8%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
S H +V +H ++ +S + V+E GG+L + ++ E A I +
Sbjct: 78 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 137
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVLR 123
H G+ +RDLK +N L +D + +K TD+G+ +P + S G+P Y+APE+LR
Sbjct: 138 HERGIIYRDLKLDNVL---LDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 194
Query: 124 -KHYGPEADVWSAGVILYILLSGVPPF---------WAETEIGIFRQILEGKIDFESEPW 173
+ YG D W+ GV+++ +++G PF TE +F+ ILE +I
Sbjct: 195 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--- 251
Query: 174 PNISESAKDLIRKMLDQNPKRRL 196
++S A +++ L+++PK RL
Sbjct: 252 -SMSVKAASVLKSFLNKDPKERL 273
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 3/130 (2%)
Query: 245 ERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSG 304
++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 362
Query: 305 TIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHL 361
TID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++ +
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 362 DDMIKEIDQD 371
D+MI+E D D
Sbjct: 423 DEMIREADID 432
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 372 MMARKMKYTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 428
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 429 ADIDGDGQVNYEEFV 443
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 304 GTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 361 LDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 VDEMIREADID 131
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 71 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 127
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 128 ADIDGDGQVNYEEFV 142
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 80/131 (61%), Gaps = 5/131 (3%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFLAATLHLNKL-EREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTID+ EFL T+ K+ + EE + AF FDKD +G+I+ EL+H G +++
Sbjct: 61 GTIDFPEFL--TMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 118
Query: 361 LDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 119 VDEMIREADID 129
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 240 LRVIAERL--NEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
L ++A ++ +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 69 LTMMARKMKDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 125
Query: 298 ADIDNSGTIDYGEFLA 313
ADID G ++Y EF+
Sbjct: 126 ADIDGDGQVNYEEFVT 141
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 303 SGTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISEL 359
+GTID+ EFL + + EE + AF FDKD +G+I+ EL+H G +++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 360 HLDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 EVDEMIREADID 132
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 72 MMARKMKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 298 ADIDNSGTIDYGEFLA 313
ADID G ++Y EF+
Sbjct: 129 ADIDGDGQVNYEEFVT 144
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 303 SGTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISEL 359
+GTID+ EFL + + EE + AF FDKD +G+I+ EL+H G +++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 360 HLDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 EVDEMIREADID 132
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 72 MMARKMKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 298 ADIDNSGTIDYGEFLA 313
ADID G ++Y EF+
Sbjct: 129 ADIDGDGQVNYEEFVT 144
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 38/233 (16%)
Query: 7 HQHVVRIHDTY-------------EDKSCVHIVMELCEGGELFDRIVKKGNYSER-EAAK 52
HQ+VVR + + + KS + I ME CE G L+D I + +R E +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR 120
Query: 53 LMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-------FYKPD- 104
L + I+ + HS G+ HRDLKP N +DE +K DFGL+ K D
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIF---IDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 105 -------EVFSDVVGSPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETE- 154
+ + +G+ YVA EVL HY + D++S G+I + + + PF E
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMER 234
Query: 155 IGIFRQILEGKIDFESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ I +++ I+F + N + K +IR ++D +P +R A +L W+
Sbjct: 235 VNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 33/231 (14%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H ++V + + + K +H+V E C+ L + + E + + V CH
Sbjct: 60 KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH 119
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVL-- 122
HRD+KPEN L + + + +K DFG + + P + + D V + +Y +PE+L
Sbjct: 120 KHNCIHRDVKPENIL---ITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG 176
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIF--------------RQILEGKIDF 168
YGP DVW+ G + LLSGVP + ++++ +Q+ F
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236
Query: 169 ES---------EP----WPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
EP +PNIS A L++ L +P RLT ++L HP+
Sbjct: 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 361 LDDMIKEIDQD 371
+D+MI+E + D
Sbjct: 121 VDEMIREANID 131
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 71 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 127
Query: 298 ADIDNSGTIDYGEFL 312
A+ID G ++Y EF+
Sbjct: 128 ANIDGDGQVNYEEFV 142
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 303 SGTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISEL 359
+GTID+ EFL + + EE + AF FDKD +G+I+ EL+H G +++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 360 HLDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 EVDEMIRESDID 132
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 72 MMARKMKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 298 ADIDNSGTIDYGEFLA 313
+DID G ++Y EF+
Sbjct: 129 SDIDGDGQVNYEEFVT 144
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 98/193 (50%), Gaps = 7/193 (3%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
HQ++V + D E+ C ++VME EG L + I G S A I+ ++ H
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHD 129
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEV--FSDVVGSPYYVAPEVLRK 124
+ + HRD+KP+N L +D + LK DFG++ + + V+G+ Y +PE +
Sbjct: 130 MRIVHRDIKPQNIL---IDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKG 186
Query: 125 HYGPE-ADVWSAGVILYILLSGVPPFWAETEIGI-FRQILEGKIDFESEPWPNISESAKD 182
E D++S G++LY +L G PPF ET + I + I + + ++ +I +S +
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSN 246
Query: 183 LIRKMLDQNPKRR 195
+I + +++ R
Sbjct: 247 VILRATEKDKANR 259
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 246 RLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGT 305
+L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +GT
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 306 IDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLD 362
ID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++ +D
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 363 DMIKEIDQD 371
+MI+E D D
Sbjct: 121 EMIREADID 129
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 69 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 125
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 126 ADIDGDGQVNYEEFV 140
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTID+ EFL + + EE + AF FDKD +G+I+ EL+H G +++
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 361 LDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 VDEMIREADID 131
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 71 MMARKMKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 127
Query: 298 ADIDNSGTIDYGEFLA 313
ADID G ++Y EF+
Sbjct: 128 ADIDGDGQVNYEEFVT 143
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTID+ EFL + + EE + AF FDKD +G+I+ EL+H G +++
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 361 LDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 VDEMIREADID 131
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 71 MMARKMKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 127
Query: 298 ADIDNSGTIDYGEFLA 313
ADID G ++Y EF+
Sbjct: 128 ADIDGDGQVNYEEFVT 143
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A+ L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFLA-ATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTID+ EFL+ + + + EE L+ AF FD+D +G I+ EL+H G +++
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 361 LDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 VDEMIREADID 131
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 241 RVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADI 300
R + E+ +EEE L E FK+ D D +G I+ EL+ + +G +L + E+ +++ ADI
Sbjct: 74 RKMKEQDSEEE---LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADI 130
Query: 301 DNSGTIDYGEFL 312
D G I+Y EF+
Sbjct: 131 DGDGHINYEEFV 142
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 246 RLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGT 305
+L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +GT
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 306 IDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLD 362
ID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++ +D
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 363 DMIKEIDQD 371
+MI+E D D
Sbjct: 121 EMIREADID 129
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 69 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 125
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 126 ADIDGDGQVNYEEFV 140
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Query: 245 ERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSG 304
++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +G
Sbjct: 1 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 305 TIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHL 361
TID+ EFL + + EE + AF FDKD +GYI+ EL+H G +++ +
Sbjct: 61 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 120
Query: 362 DDMIKEIDQD 371
D+MI+E D D
Sbjct: 121 DEMIREADID 130
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 70 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 126
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 127 ADIDGDGQVNYEEFV 141
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 76/129 (58%), Gaps = 3/129 (2%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L EE+ ++E F + DTD SGTI ELK ++ +G + + EIK ++ D D SGTI
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 307 DYGEFLA-ATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDD 363
D+ EFL T + + + E +L AF FD D SG ITI +L+ KE G ++E L +
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQE 141
Query: 364 MIKEIDQDD 372
MI E D++D
Sbjct: 142 MIAEADRND 150
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+ ER + EEI LK F++ D DNSGTIT +L+ K +G L E E+++++ AD ++
Sbjct: 94 MGERDSREEI--LK-AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRND 150
Query: 303 SGTIDYGEFL 312
ID EF+
Sbjct: 151 DNEIDEDEFI 160
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 114/254 (44%), Gaps = 43/254 (16%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 81 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 138
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ + LK DFGL+ PD ++ V + +Y
Sbjct: 139 LKYIHSANVLHRDLKPSNLL---LNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQI-----------LE 163
APE++ K Y D+WS G IL +LS P F + + I L
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 255
Query: 164 GKIDFESE------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
I+ ++ PW PN A DL+ KML NP +R+ + L HP++
Sbjct: 256 CGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
Query: 208 VDDKVAPDKPLDSA 221
D+P+ A
Sbjct: 316 AQYYDPSDEPIAEA 329
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 35/235 (14%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
+H ++V+++D K + +V E + +L D V +G A + ++ +
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAY 115
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVL 122
CH V HRDLKP+N L ++ + LK DFGL+ F P ++ V + +Y AP+VL
Sbjct: 116 CHDRRVLHRDLKPQNLL---INREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL 172
Query: 123 --RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS--- 177
K Y D+WS G I +++G P F +E +I S+ WPN++
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 178 ----------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
ES DL+ KML +P +R+TA + L H + ++
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 74/128 (57%), Gaps = 3/128 (2%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +GTI
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 307 DYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDD 363
D+ EFL + + EE + AF FDKD +GYI+ EL+H G +++ +D+
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 364 MIKEIDQD 371
MI+E D D
Sbjct: 121 MIREADID 128
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 68 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 124
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 125 ADIDGDGQVNYEEFV 139
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 35/235 (14%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
+H ++V+++D K + +V E + +L D V +G A + ++ +
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAY 115
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVL 122
CH V HRDLKP+N L ++ + LK DFGL+ F P ++ V + +Y AP+VL
Sbjct: 116 CHDRRVLHRDLKPQNLL---INREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL 172
Query: 123 --RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS--- 177
K Y D+WS G I +++G P F +E +I S+ WPN++
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 178 ----------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
ES DL+ KML +P +R+TA + L H + ++
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 12/204 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
EH + + T++ K + VME GG+L I + A I+ ++ H
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 136
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEV-LR 123
S G+ +RDLK +N L +D+D +K DFG+ D ++ G+P Y+APE+ L
Sbjct: 137 SKGIVYRDLKLDNIL---LDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG 193
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEP-WPNISESAKD 182
+ Y D WS GV+LY +L G PF + E +F I ++D P W + + AKD
Sbjct: 194 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI---RMDNPFYPRW--LEKEAKD 248
Query: 183 LIRKMLDQNPKRRLTAH-EVLCHP 205
L+ K+ + P++RL ++ HP
Sbjct: 249 LLVKLFVREPEKRLGVRGDIRQHP 272
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 107/235 (45%), Gaps = 35/235 (14%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
+H ++V+++D K + +V E + +L D V +G A + ++ +
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAY 115
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVL 122
CH V HRDLKP+N L ++ + LK DFGL+ F P ++ + + +Y AP+VL
Sbjct: 116 CHDRRVLHRDLKPQNLL---INREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVL 172
Query: 123 --RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS--- 177
K Y D+WS G I +++G P F +E +I S+ WPN++
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 178 ----------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
ES DL+ KML +P +R+TA + L H + ++
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L +E+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFLA-ATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTID+ EFL + + EE L AF FDKD +G+I+ EL+H G +++
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 361 LDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 VDEMIREADVD 131
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFLAA 314
LKE F++ D D +G I+ EL+ + +G +L + E+ +++ AD+D G ++Y EF+
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
Query: 315 TL 316
+
Sbjct: 145 MM 146
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 81 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 138
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ LK DFGL+ PD ++ V + +Y
Sbjct: 139 LKYIHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 254
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 255 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 314
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 315 LAQYYDPSDEPIAEA 329
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGG-ELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
EH +++++ D +E++ +VME G +LF I + E A+ + + +V V
Sbjct: 87 EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYL 146
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL-- 122
+ HRD+K EN + + ED +K DFG + + + ++F G+ Y APEVL
Sbjct: 147 RLKDIIHRDIKDENIV---IAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMG 203
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
+ GPE ++WS GV LY L+ PF LE ++ P +S+
Sbjct: 204 NPYRGPELEMWSLGVTLYTLVFEENPFCE----------LEETVEAAIHPPYLVSKELMS 253
Query: 183 LIRKMLDQNPKRRLTAHEVLCHPWIVD 209
L+ +L P+RR T +++ PW+
Sbjct: 254 LVSGLLQPVPERRTTLEKLVTDPWVTQ 280
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 30/237 (12%)
Query: 5 SEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKL-MKTIVGVVEC 63
+ + + ++H ++D++ +++VME GG+L + K G E A+ + IV ++
Sbjct: 118 GDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDS 177
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVV--GSPYYVAPEV 121
H LG HRD+KP+N L +D ++ DFG + + D +V G+P Y++PE+
Sbjct: 178 VHRLGYVHRDIKPDNIL---LDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEI 234
Query: 122 LRK--------HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPW 173
L+ YGPE D W+ GV Y + G PF+A++ + +I+ K E
Sbjct: 235 LQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK---EHLSL 291
Query: 174 P----NISESAKDLIRKMLDQNPKR--RLTAHEVLCHPWI-------VDDKVAPDKP 217
P + E A+D I+++L R R A + HP+ + D V P P
Sbjct: 292 PLVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWDGLRDSVPPFTP 348
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L +E+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFLA-ATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTID+ EFL + + EE L AF FDKD +G+I+ EL+H G +++
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 361 LDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 VDEMIREADVD 131
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFLAA 314
LKE F++ D D +G I+ EL+ + +G +L + E+ +++ AD+D G ++Y EF+
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
Query: 315 TL 316
+
Sbjct: 145 MM 146
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 36/235 (15%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVEC 63
+H+++VR+HD + +V E C+ + FD G+ + ++ +
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGF 116
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVL 122
CHS V HRDLKP+N L ++ + LK +FGL+ F P +S V + +Y P+VL
Sbjct: 117 CHSRNVLHRDLKPQNLL---INRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVL 173
Query: 123 --RKHYGPEADVWSAGVILYILLSGVPPFWAETEIG-----IFRQI----------LEGK 165
K Y D+WSAG I L + P + ++ IFR + +
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
Query: 166 IDFESEPW-----------PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
D++ P P ++ + +DL++ +L NP +R++A E L HP+ D
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
EH + + T++ K + VME GG+L I + A I+ ++ H
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 135
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEV-LR 123
S G+ +RDLK +N L +D+D +K DFG+ D + G+P Y+APE+ L
Sbjct: 136 SKGIVYRDLKLDNIL---LDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG 192
Query: 124 KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEP-WPNISESAKD 182
+ Y D WS GV+LY +L G PF + E +F I ++D P W + + AKD
Sbjct: 193 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI---RMDNPFYPRW--LEKEAKD 247
Query: 183 LIRKMLDQNPKRRLTAH-EVLCHP 205
L+ K+ + P++RL ++ HP
Sbjct: 248 LLVKLFVREPEKRLGVRGDIRQHP 271
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 18/211 (8%)
Query: 6 EHQHVVRIHDTY--EDKSCVHIVMELCEGG--ELFDRIVKKGNYSEREAAKLMKTIVGVV 61
H++V+++ D E+K +++VME C G E+ D + +K + +A ++ +
Sbjct: 64 RHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFCQLIDGL 122
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKP---DEVFSDVVGSPYYVA 118
E HS G+ H+D+KP N L + LK + G++ P D+ GSP +
Sbjct: 123 EYLHSQGIVHKDIKPGNLLLTT---GGTLKISALGVAEALHPFAADDTCRTSQGSPAFQP 179
Query: 119 PEV---LRKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN 175
PE+ L G + D+WSAGV LY + +G+ PF + +F I +G + P
Sbjct: 180 PEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPP 239
Query: 176 ISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
+S DL++ ML+ P +R + ++ H W
Sbjct: 240 LS----DLLKGMLEYEPAKRFSIRQIRQHSW 266
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 87 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 144
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ LK DFGL+ PD ++ V + +Y
Sbjct: 145 LKYIHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 201
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 202 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 260
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 261 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 320
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 321 LEQYYDPSDEPIAEA 335
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 136
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ LK DFGL+ PD ++ V + +Y
Sbjct: 137 LKYIHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 252
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 253 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 312
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 313 LEQYYDPSDEPIAEA 327
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V + D + C+ +V E E ++ D K G + L + + GV C
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHC- 135
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVL- 122
H + HRDLKP+N L ++ D ALK DFGL+ F P ++ V + +Y AP+VL
Sbjct: 136 HQHRILHRDLKPQNLL---INSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLM 192
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPF-----------------------WAET-EIGI 157
K Y D+WS G I +++G P F W + E+ +
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252
Query: 158 FRQILEGKIDFESEPW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
++Q FE +PW P + DL+ ML +P +R++A + + HP+ D
Sbjct: 253 WKQ--RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 136
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L + + LK DFGL+ PD ++ V + +Y
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 252
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 253 NXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 312
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 313 LEQYYDPSDEPIAEA 327
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 136
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L + + LK DFGL+ PD ++ V + +Y
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 252
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 253 NXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 312
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 313 LEQYYDPSDEPIAEA 327
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 249 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDY 308
EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +GTID+
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 309 GEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMI 365
EFL + + EE + AF FDKD +GYI+ EL+H G +++ +D+MI
Sbjct: 64 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 123
Query: 366 KEIDQD 371
+E D D
Sbjct: 124 READID 129
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 69 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 125
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 126 ADIDGDGQVNYEEFV 140
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 30/227 (13%)
Query: 1 MHHLSEHQ-HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
++ L +H ++R++D +++VME C +L + KK + E K ++
Sbjct: 108 LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLE 166
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSPYY 116
V H G+ H DLKP NFL + D LK DFG++ +PD V VG+ Y
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 117 VAPEVLRKHYGPE------------ADVWSAGVILYILLSGVPPFWAETEIGIFRQI--L 162
+ PE ++ +DVWS G ILY + G PF I QI L
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-----IINQISKL 277
Query: 163 EGKIDFESE-PWPNISES-AKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
ID E +P+I E +D+++ L ++PK+R++ E+L HP++
Sbjct: 278 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 140
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L + + LK DFGL+ PD ++ V + +Y
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 256
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 317 LEQYYDPSDEPIAEA 331
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 81 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 138
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ LK DFGL+ PD ++ V + +Y
Sbjct: 139 LKYIHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 254
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 255 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 314
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 315 LEQYYDPSDEPIAEA 329
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 77 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 134
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ LK DFGL+ PD ++ V + +Y
Sbjct: 135 LKYIHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 250
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 251 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 310
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 311 LEQYYDPSDEPIAEA 325
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 136
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L + + LK DFGL+ PD ++ V + +Y
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 252
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 253 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 312
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 313 LEQYYDPSDEPIAEA 327
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V + D + C+ +V E E ++ D K G + L + + GV C
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHC- 135
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVL- 122
H + HRDLKP+N L ++ D ALK DFGL+ F P ++ V + +Y AP+VL
Sbjct: 136 HQHRILHRDLKPQNLL---INSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLM 192
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPF-----------------------WAET-EIGI 157
K Y D+WS G I +++G P F W + E+ +
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252
Query: 158 FRQILEGKIDFESEPW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
++Q FE +PW P + DL+ ML +P +R++A + + HP+ D
Sbjct: 253 WKQ--RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 140
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ LK DFGL+ PD ++ V + +Y
Sbjct: 141 LKYIHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 256
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 317 LEQYYDPSDEPIAEA 331
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 140
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L + + LK DFGL+ PD ++ V + +Y
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 256
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 317 LEQYYDPSDEPIAEA 331
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 30/227 (13%)
Query: 1 MHHLSEHQ-HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
++ L +H ++R++D +++VME C +L + KK + E K ++
Sbjct: 108 LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLE 166
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSPYY 116
V H G+ H DLKP NFL + D LK DFG++ +PD V VG+ Y
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 117 VAPEVLRKHYGPE------------ADVWSAGVILYILLSGVPPFWAETEIGIFRQI--L 162
+ PE ++ +DVWS G ILY + G PF I QI L
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-----IINQISKL 277
Query: 163 EGKIDFESE-PWPNISES-AKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
ID E +P+I E +D+++ L ++PK+R++ E+L HP++
Sbjct: 278 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 249 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDY 308
EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +GTID+
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 309 GEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMI 365
EFL + + EE + AF FDKD +GYI+ EL+H G +++ +D+MI
Sbjct: 62 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 121
Query: 366 KEIDQD 371
+E D D
Sbjct: 122 READID 127
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + +EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++
Sbjct: 67 MMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 123
Query: 298 ADIDNSGTIDYGEFL 312
ADID G ++Y EF+
Sbjct: 124 ADIDGDGQVNYEEFV 138
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 111/254 (43%), Gaps = 43/254 (16%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 77 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 134
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ LK DFGL+ PD ++ V + +Y
Sbjct: 135 LKYIHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL E E
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLN 251
Query: 172 --------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
PW PN A DL+ KML NP +R+ + L HP++
Sbjct: 252 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
Query: 208 VDDKVAPDKPLDSA 221
D+P+ A
Sbjct: 312 EQYYDPSDEPIAEA 325
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 84 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 141
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ LK DFGL+ PD ++ V + +Y
Sbjct: 142 LKYIHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 198
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 257
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 258 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 317
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 318 LEQYYDPSDEPIAEA 332
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 85 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 142
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ LK DFGL+ PD ++ V + +Y
Sbjct: 143 LKYIHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 199
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 200 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 258
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 259 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 318
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 319 LEQYYDPSDEPIAEA 333
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 76 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 133
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ LK DFGL+ PD ++ V + +Y
Sbjct: 134 LKYIHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 190
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 191 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 249
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 250 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 309
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 310 LEQYYDPSDEPIAEA 324
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 140
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ LK DFGL+ PD ++ V + +Y
Sbjct: 141 LKYIHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 256
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 317 LEQYYDPSDEPIAEA 331
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 136
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ LK DFGL+ PD ++ V + +Y
Sbjct: 137 LKYIHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 252
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 253 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 312
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 313 LEQYYDPSDEPIAEA 327
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 99 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 156
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ LK DFGL+ PD ++ V + +Y
Sbjct: 157 LKYIHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 213
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 272
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 273 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 332
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 333 LEQYYDPSDEPIAEA 347
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 30/227 (13%)
Query: 1 MHHLSEHQ-HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
++ L +H ++R++D +++VME C +L + KK + E K ++
Sbjct: 108 LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLE 166
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSPYY 116
V H G+ H DLKP NFL + D LK DFG++ +PD V VG+ Y
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNY 222
Query: 117 VAPEVLRKHYGPE------------ADVWSAGVILYILLSGVPPFWAETEIGIFRQI--L 162
+ PE ++ +DVWS G ILY + G PF I QI L
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-----IINQISKL 277
Query: 163 EGKIDFESE-PWPNISES-AKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
ID E +P+I E +D+++ L ++PK+R++ E+L HP++
Sbjct: 278 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 30/227 (13%)
Query: 1 MHHLSEHQ-HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
++ L +H ++R++D +++VME C +L + KK + E K ++
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLE 138
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSPYY 116
V H G+ H DLKP NFL + D LK DFG++ +PD V VG+ Y
Sbjct: 139 AVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 194
Query: 117 VAPEVLRKHYGPE------------ADVWSAGVILYILLSGVPPFWAETEIGIFRQI--L 162
+ PE ++ +DVWS G ILY + G PF I QI L
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-----IINQISKL 249
Query: 163 EGKIDFESE-PWPNISES-AKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
ID E +P+I E +D+++ L ++PK+R++ E+L HP++
Sbjct: 250 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 30/227 (13%)
Query: 1 MHHLSEHQ-HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
++ L +H ++R++D +++VME C +L + KK + E K ++
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLE 138
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSPYY 116
V H G+ H DLKP NFL + D LK DFG++ +PD V VG+ Y
Sbjct: 139 AVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNY 194
Query: 117 VAPEVLRKHYGPE------------ADVWSAGVILYILLSGVPPFWAETEIGIFRQI--L 162
+ PE ++ +DVWS G ILY + G PF I QI L
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-----IINQISKL 249
Query: 163 EGKIDFESE-PWPNISES-AKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
ID E +P+I E +D+++ L ++PK+R++ E+L HP++
Sbjct: 250 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 112/255 (43%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V++V L G +L+ +++K + S + I+
Sbjct: 99 RHENIIGINDIIRAPTIEQMKDVYLVTHLM-GADLY-KLLKTQHLSNDHICYFLYQILRG 156
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L + + LK DFGL+ PD ++ V + +Y
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWY 213
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 272
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 273 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 332
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 333 LEQYYDPSDEPIAEA 347
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 38/233 (16%)
Query: 7 HQHVVRIHDTY-------------EDKSCVHIVMELCEGGELFDRIVKKGNYSER-EAAK 52
HQ+VVR + + + KS + I ME CE L+D I + +R E +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 53 LMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-------FYKPD- 104
L + I+ + HS G+ HRDLKP N +DE +K DFGL+ K D
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIF---IDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 105 -------EVFSDVVGSPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETE- 154
+ + +G+ YVA EVL HY + D++S G+I + + + PF E
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMER 234
Query: 155 IGIFRQILEGKIDFESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ I +++ I+F + N + K +IR ++D +P +R A +L W+
Sbjct: 235 VNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 30/227 (13%)
Query: 1 MHHLSEHQ-HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
++ L +H ++R++D +++VME C +L + KK + E K ++
Sbjct: 64 LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLE 122
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSPYY 116
V H G+ H DLKP NFL + D LK DFG++ +PD V VG+ Y
Sbjct: 123 AVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 178
Query: 117 VAPEVLRKHYGPE------------ADVWSAGVILYILLSGVPPFWAETEIGIFRQI--L 162
+ PE ++ +DVWS G ILY + G PF I QI L
Sbjct: 179 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-----IINQISKL 233
Query: 163 EGKIDFESE-PWPNISES-AKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
ID E +P+I E +D+++ L ++PK+R++ E+L HP++
Sbjct: 234 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 280
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 30/227 (13%)
Query: 1 MHHLSEHQ-HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
++ L +H ++R++D +++VME C +L + KK + E K ++
Sbjct: 61 LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLE 119
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSPYY 116
V H G+ H DLKP NFL + D LK DFG++ +PD V VG+ Y
Sbjct: 120 AVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 175
Query: 117 VAPEVLRKHYGPE------------ADVWSAGVILYILLSGVPPFWAETEIGIFRQI--L 162
+ PE ++ +DVWS G ILY + G PF I QI L
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-----IINQISKL 230
Query: 163 EGKIDFESE-PWPNISES-AKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
ID E +P+I E +D+++ L ++PK+R++ E+L HP++
Sbjct: 231 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 277
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 30/227 (13%)
Query: 1 MHHLSEHQ-HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
++ L +H ++R++D +++VME C +L + KK + E K ++
Sbjct: 60 LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLE 118
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSPYY 116
V H G+ H DLKP NFL + D LK DFG++ +PD V VG+ Y
Sbjct: 119 AVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 174
Query: 117 VAPEVLRKHYGPE------------ADVWSAGVILYILLSGVPPFWAETEIGIFRQI--L 162
+ PE ++ +DVWS G ILY + G PF I QI L
Sbjct: 175 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-----IINQISKL 229
Query: 163 EGKIDFESE-PWPNISES-AKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
ID E +P+I E +D+++ L ++PK+R++ E+L HP++
Sbjct: 230 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 276
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 107/204 (52%), Gaps = 9/204 (4%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V + + +Y S + I+ME GG D +++ G + E + A ++K I+ ++ HS
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYLHSEK 140
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV-VGSPYYVAPEVLRKH-Y 126
HRD+K N L + E +K DFG++ ++ + VG+P+++APEV+++ Y
Sbjct: 141 KIHRDIKAANVL---LSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAY 197
Query: 127 GPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRK 186
+AD+WS G+ L G PP +++ R + + + ++S K+ I
Sbjct: 198 DSKADIWSLGITAIELAKGEPP---NSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDA 254
Query: 187 MLDQNPKRRLTAHEVLCHPWIVDD 210
L+++P R TA E+L H +IV +
Sbjct: 255 CLNKDPSFRPTAKELLKHKFIVKN 278
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 112/255 (43%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 140
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ LK DFGL+ PD + V + +Y
Sbjct: 141 LKYIHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 197
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 256
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 317 LEQYYDPSDEPIAEA 331
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 112/255 (43%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 84 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 141
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ LK DFGL+ PD + V + +Y
Sbjct: 142 LKYIHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 198
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 257
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 258 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 317
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 318 LEQYYDPSDEPIAEA 332
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++++ I+D T E V+IV +L E +L+ +++K + S + I+
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKCQHLSNDHICYFLYQILRG 140
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ LK DFGL+ PD ++ V + +Y
Sbjct: 141 LKYIHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE--- 171
APE++ K Y D+WS G IL +LS P F + + IL G + S+
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-GILGSPSQEDL 256
Query: 172 ---------------------PW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
PW PN A DL+ KML NP +R+ + L HP+
Sbjct: 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
Query: 207 IVDDKVAPDKPLDSA 221
+ D+P+ A
Sbjct: 317 LEQYYDPSDEPIAEA 331
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCHSL 67
HVV+ + +Y + + IVME C G + D I ++ +E E A ++++ + +E H +
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 68 GVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLRK-H 125
HRD+K N L + + K DFG++ + V+G+P+++APEV+++
Sbjct: 145 RKIHRDIKAGNILL---NTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIG 201
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNI------SES 179
Y AD+WS G+ + G PP+ +I R I + P P S++
Sbjct: 202 YNCVADIWSLGITAIEMAEGKPPY---ADIHPMRAIFM----IPTNPPPTFRKPELWSDN 254
Query: 180 AKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDK 211
D +++ L ++P++R TA ++L HP++ K
Sbjct: 255 FTDFVKQCLVKSPEQRATATQLLQHPFVRSAK 286
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL + +G E+E++D ++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 304 GTIDYGEFLAATLHLNK-LEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTID+ EFL K + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 61 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 361 LDDMIKEIDQD 371
+D+ I+E D D
Sbjct: 121 VDEXIREADID 131
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 248 NEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTID 307
+EEEI +E F++ D D +G I+ EL+ +G +L + E+ + + ADID G ++
Sbjct: 81 SEEEI---REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVN 137
Query: 308 YGEFL 312
Y EF+
Sbjct: 138 YEEFV 142
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 9/189 (4%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+ ++H ++ ++ VME GG+L I + G + E A I + S G+
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 142
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSD-VVGSPYYVAPEVLR-KHYG 127
+RDLK +N + +D + +K DFG+ D V + G+P Y+APE++ + YG
Sbjct: 143 IYRDLKLDNVM---LDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYG 199
Query: 128 PEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKM 187
D W+ GV+LY +L+G PF E E +F+ I+E + + ++S+ A + + +
Sbjct: 200 KSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGL 255
Query: 188 LDQNPKRRL 196
+ ++P +RL
Sbjct: 256 MTKHPGKRL 264
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE++ KE F + D D G IT EL ++ +G E+E++D+M D D +
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 304 GTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GT+D+ EFL + + EE + AF FDKD +G+++ EL+H G +S+
Sbjct: 61 GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEE 120
Query: 361 LDDMIKEIDQD 371
+D+MI+ D D
Sbjct: 121 VDEMIRAADTD 131
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDA 297
M R + + NEEEI +E F++ D D +G ++ EL+ + R+G +L + E+ +++ A
Sbjct: 71 MMARKMKDTDNEEEI---REAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRA 127
Query: 298 ADIDNSGTIDYGEFL 312
AD D G ++Y EF+
Sbjct: 128 ADTDGDGQVNYEEFV 142
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL + +G E+E++D ++ D D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 304 GTIDYGEFLAATLHLNK-LEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTID+ EFL K + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 62 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 121
Query: 361 LDDMIKEIDQD 371
+D I+E D D
Sbjct: 122 VDQXIREADID 132
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 248 NEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTID 307
+EEEI +E F++ D D +G I+ EL+ +G +L + E+ + ADID G ++
Sbjct: 82 SEEEI---REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVN 138
Query: 308 YGEFL 312
Y EF+
Sbjct: 139 YEEFV 143
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 3/128 (2%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L +E+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +GTI
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 307 DYGEFLA-ATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDD 363
D+ EFL + + EE L AF FDKD +G+I+ EL+H G +++ +D+
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 120
Query: 364 MIKEIDQD 371
MI+E D D
Sbjct: 121 MIREADVD 128
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFLAA 314
LKE F++ D D +G I+ EL+ + +G +L + E+ +++ AD+D G ++Y EF+
Sbjct: 82 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 141
Query: 315 TL 316
+
Sbjct: 142 MM 143
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+A++L E++I KE F + D D G IT EL ++ +G E+E++D+++ D D
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 303 SGTIDYGEFLA-ATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISEL 359
+GTID+ EFL + + EE L AF FDKD +G+I+ EL+H G +++
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 360 HLDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 EVDEMIREADVD 132
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 241 RVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADI 300
R + + +EEE LKE F++ D D +G I+ EL+ + +G +L + E+ +++ AD+
Sbjct: 75 RKMKDTDSEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 131
Query: 301 DNSGTIDYGEFLAATL 316
D G I+Y EF+ +
Sbjct: 132 DGDGQINYDEFVKVMM 147
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 9/189 (4%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+ ++H ++ ++ VME GG+L I + G + E A I + S G+
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 463
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSD-VVGSPYYVAPEVLR-KHYG 127
+RDLK +N + +D + +K DFG+ D V + G+P Y+APE++ + YG
Sbjct: 464 IYRDLKLDNVM---LDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYG 520
Query: 128 PEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKM 187
D W+ GV+LY +L+G PF E E +F+ I+E + + ++S+ A + + +
Sbjct: 521 KSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGL 576
Query: 188 LDQNPKRRL 196
+ ++P +RL
Sbjct: 577 MTKHPGKRL 585
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 3/128 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
+ L EE+I KE F + D DN+G+I+ EL ++ +G E+E+ DLM+ D+D +
Sbjct: 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 61
Query: 304 GTIDYGEFLA-ATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
I++ EFLA + L + E+ LL AF FDK+ G I+ EL+H G +++
Sbjct: 62 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 121
Query: 361 LDDMIKEI 368
+DDM++E+
Sbjct: 122 VDDMLREV 129
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Query: 249 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDY 308
EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +GTID+
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 309 GEFLAATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIK 366
EFL K E + AF FDKD +GYI+ EL+H G +++ +D+MI+
Sbjct: 62 PEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 121
Query: 367 EIDQD 371
E + D
Sbjct: 122 EANID 126
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 45/73 (61%)
Query: 240 LRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAAD 299
L ++A ++ + + ++E F++ D D +G I+ EL+ + +G +L + E+ +++ A+
Sbjct: 65 LTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAN 124
Query: 300 IDNSGTIDYGEFL 312
ID G ++Y EF+
Sbjct: 125 IDGDGQVNYEEFV 137
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+++ L EE+I KE F + D DNSG+I+ EL ++ +G E+E+ DLM+ D+D
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 303 SGTIDYGEFLA-ATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISEL 359
+ I++ EFLA + L + E+ LL AF FDK+ G I+ EL+H G +++
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 360 HLDDMIKEI 368
+D+M++E+
Sbjct: 121 EVDEMLREV 129
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL + +G E+E++D ++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGN 60
Query: 304 GTIDYGEFLAATLHLNK-LEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTI++ EFL K + EE + AF FDKD +GYI+ EL+H G +++
Sbjct: 61 GTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 361 LDDMIKEIDQD 371
+D+ I+E D D
Sbjct: 121 VDEXIREADID 131
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 241 RVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADI 300
R + +EEEI +E F++ D D +G I+ EL+ +G +L + E+ + + ADI
Sbjct: 74 RCXKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADI 130
Query: 301 DNSGTIDYGEFL 312
D G ++Y EF+
Sbjct: 131 DGDGQVNYEEFV 142
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 3/128 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
+ L EE+I KE F + D DN+G+I+ EL ++ +G E+E+ DLM+ D+D +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 304 GTIDYGEFLA-ATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
I++ EFLA + L + E+ LL AF FDK+ G I+ EL+H G +++
Sbjct: 61 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 120
Query: 361 LDDMIKEI 368
+DDM++E+
Sbjct: 121 VDDMLREV 128
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+A++L +++I KE F + D D G IT EL ++ +G E+E++D+++ D D
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 303 SGTIDYGEFLA-ATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISEL 359
+GTID+ EFL + + EE L AF FDKD +G+I+ EL+H G +++
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 360 HLDDMIKEIDQD 371
+D+MI+E D D
Sbjct: 121 EVDEMIREADVD 132
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 241 RVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADI 300
R + + +EEE LKE F++ D D +G I+ EL+ + +G +L + E+ +++ AD+
Sbjct: 75 RKMKDTDSEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 131
Query: 301 DNSGTIDYGEFLAATL 316
D G I+Y EF+ +
Sbjct: 132 DGDGQINYEEFVKVMM 147
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 91/193 (47%), Gaps = 34/193 (17%)
Query: 44 NYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKP 103
+SE + L+ ++ ++ HS GV HRDLKP N L+V+ED LK DFGL+
Sbjct: 122 KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN---LAVNEDCELKILDFGLA--RHA 176
Query: 104 DEVFSDVVGSPYYVAPEVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQI 161
D + V + +Y APEV+ HY D+WS G I+ +L+G F + + QI
Sbjct: 177 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236
Query: 162 LE-----------------GKIDFESEP----------WPNISESAKDLIRKMLDQNPKR 194
L+ K +S P +P S A DL+ KML+ + +
Sbjct: 237 LKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK 296
Query: 195 RLTAHEVLCHPWI 207
RLTA + L HP+
Sbjct: 297 RLTAAQALTHPFF 309
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 110/237 (46%), Gaps = 43/237 (18%)
Query: 6 EHQHVVRIHDTYEDKSCV------HIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + S + ++VM + +I+ +SE + L+ ++
Sbjct: 99 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGM-EFSEEKIQYLVYQMLK 155
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS GV HRDLKP N L+V+ED LK DFGL+ D + V + +Y AP
Sbjct: 156 GLKYIHSAGVVHRDLKPGN---LAVNEDCELKILDFGLA--RHADAEMTGYVVTRWYRAP 210
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE-------------- 163
EV+ HY D+WS G I+ +L+G F + + QIL+
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 270
Query: 164 ---GKIDFESEP----------WPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
K +S P +P S A DL+ KML+ + +RLTA + L HP+
Sbjct: 271 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 110/251 (43%), Gaps = 43/251 (17%)
Query: 6 EHQHVVRIHD-----TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++V+ I D T E V+IV +L E +L+ +++K S + I+
Sbjct: 99 RHENVIGIRDILRASTLEAMRDVYIVQDLMET-DLY-KLLKSQQLSNDHICYFLYQILRG 156
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE----VFSDVVGSPYY 116
++ HS V HRDLKP N L ++ LK DFGL+ P+ ++ V + +Y
Sbjct: 157 LKYIHSANVLHRDLKPSNLL---INTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWY 213
Query: 117 VAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQIL------------ 162
APE++ K Y D+WS G IL +LS P F + + IL
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 273
Query: 163 -----EGKIDFESEP----------WPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + +S P +P A DL+ +ML NP +R+T E L HP++
Sbjct: 274 CIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYL 333
Query: 208 VDDKVAPDKPL 218
D+P+
Sbjct: 334 EQYYDPTDEPV 344
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 113/221 (51%), Gaps = 12/221 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK-KGNYSEREAAKLMKTIVGVVECC 64
+H ++V++ D + ++ + I++E C GG + +++ + +E + + K + +
Sbjct: 92 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 151
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVLR 123
H + HRDLK N LF ++D D +K DFG+S + + +G+PY++APEV+
Sbjct: 152 HDNKIIHRDLKAGNILF-TLDGD--IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVM 208
Query: 124 ------KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS 177
+ Y +ADVWS G+ L + PP + + +I + + ++P S
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWS 267
Query: 178 ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPL 218
+ KD ++K L++N R T ++L HP++ D P + L
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIREL 308
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 113/221 (51%), Gaps = 12/221 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK-KGNYSEREAAKLMKTIVGVVECC 64
+H ++V++ D + ++ + I++E C GG + +++ + +E + + K + +
Sbjct: 92 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 151
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVLR 123
H + HRDLK N LF ++D D +K DFG+S + + +G+PY++APEV+
Sbjct: 152 HDNKIIHRDLKAGNILF-TLDGD--IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVM 208
Query: 124 ------KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS 177
+ Y +ADVWS G+ L + PP + + +I + + ++P S
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWS 267
Query: 178 ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPL 218
+ KD ++K L++N R T ++L HP++ D P + L
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIREL 308
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 110/221 (49%), Gaps = 12/221 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK-KGNYSEREAAKLMKTIVGVVECC 64
+H ++V++ D + ++ + I++E C GG + +++ + +E + + K + +
Sbjct: 92 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 151
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVLR 123
H + HRDLK N LF D +K DFG+S + + +G+PY++APEV+
Sbjct: 152 HDNKIIHRDLKAGNILFTL---DGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVM 208
Query: 124 ------KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS 177
+ Y +ADVWS G+ L + PP + + +I + + ++P S
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWS 267
Query: 178 ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPL 218
+ KD ++K L++N R T ++L HP++ D P + L
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIREL 308
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 112/222 (50%), Gaps = 13/222 (5%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK-KGNYSEREAAKLMKTIVGVVECC 64
+H ++V++ D + ++ + I++E C GG + +++ + +E + + K + +
Sbjct: 65 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 124
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEV--FSDVVGSPYYVAPEVL 122
H + HRDLK N LF ++D D +K DFG+S + +G+PY++APEV+
Sbjct: 125 HDNKIIHRDLKAGNILF-TLDGD--IKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVV 181
Query: 123 R------KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNI 176
+ Y +ADVWS G+ L + PP + + +I + + ++P
Sbjct: 182 MCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRW 240
Query: 177 SESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPL 218
S + KD ++K L++N R T ++L HP++ D P + L
Sbjct: 241 SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIREL 282
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 38/233 (16%)
Query: 7 HQHVVRIHDTY-------------EDKSCVHIVMELCEGGELFDRIVKKGNYSER-EAAK 52
HQ+VVR + + + KS + I E CE L+D I + +R E +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 53 LMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-------FYKPD- 104
L + I+ + HS G+ HR+LKP N +DE +K DFGL+ K D
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIF---IDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 105 -------EVFSDVVGSPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETE- 154
+ + +G+ YVA EVL HY + D +S G+I + + PF E
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF---EXIYPFSTGXER 234
Query: 155 IGIFRQILEGKIDFESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ I +++ I+F + N + K +IR ++D +P +R A +L W+
Sbjct: 235 VNILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 116/252 (46%), Gaps = 43/252 (17%)
Query: 1 MHHLSEHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLM 54
+ HL +H++V+ + D + ED S V++V L G + IVK S+ L+
Sbjct: 81 LKHL-KHENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLV 137
Query: 55 KTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSP 114
++ ++ HS G+ HRDLKP N ++V+ED+ L+ DFGL+ + DE + V +
Sbjct: 138 YQLLRGLKYIHSAGIIHRDLKPSN---VAVNEDSELRILDFGLA--RQADEEMTGYVATR 192
Query: 115 YYVAPEVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE--------- 163
+Y APE++ HY D+WS G I+ LL G F I ++I+E
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV 252
Query: 164 -GKIDFESE--------PWPNISES---------AKDLIRKMLDQNPKRRLTAHEVLCHP 205
KI E P P S A DL+ +ML + +R++A E L H
Sbjct: 253 LAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHA 312
Query: 206 WIVDDKVAPDKP 217
+ D+P
Sbjct: 313 YFSQYHDPEDEP 324
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 107/242 (44%), Gaps = 37/242 (15%)
Query: 1 MHHLS--EHQHVVRIHDT-----YEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAA 51
+ HL EH +VVR+ D + ++ + +V E + D++ + G +E
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 52 KLMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVV 111
+ + + G+ + HS V HRDLKP+N L V +K DFGL+ Y + VV
Sbjct: 125 MMFQLLRGL-DFLHSHRVVHRDLKPQNIL---VTSSGQIKLADFGLARIYSFQMALTSVV 180
Query: 112 GSPYYVAPEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFES 170
+ +Y APEVL + Y D+WS G I + P F +++ +IL+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240
Query: 171 EPWP-----------------------NISESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
E WP +I E KDL+ K L NP +R++A+ L HP+
Sbjct: 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
Query: 208 VD 209
D
Sbjct: 301 QD 302
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 107/242 (44%), Gaps = 37/242 (15%)
Query: 1 MHHLS--EHQHVVRIHDT-----YEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAA 51
+ HL EH +VVR+ D + ++ + +V E + D++ + G +E
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 52 KLMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVV 111
+ + + G+ + HS V HRDLKP+N L V +K DFGL+ Y + VV
Sbjct: 125 MMFQLLRGL-DFLHSHRVVHRDLKPQNIL---VTSSGQIKLADFGLARIYSFQMALTSVV 180
Query: 112 GSPYYVAPEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFES 170
+ +Y APEVL + Y D+WS G I + P F +++ +IL+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240
Query: 171 EPWP-----------------------NISESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
E WP +I E KDL+ K L NP +R++A+ L HP+
Sbjct: 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
Query: 208 VD 209
D
Sbjct: 301 QD 302
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFD---RIVKKGNYS-----EREAAKLMKTIV 58
H ++V + ++ K + +VM+L GG + D IV KG + E A +++ ++
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKP------DEVFSDVVG 112
+E H G HRD+K N L + ED +++ DFG+S F ++V VG
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNIL---LGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 113 SPYYVAPEVLR--KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDF-- 168
+P ++APEV+ + Y +AD+WS G+ L +G P+ + + L+
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 248
Query: 169 ----ESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
+ E +S + +I L ++P++R TA E+L H
Sbjct: 249 TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V + + +Y + + I+ME GG D +++ G E + A +++ I+ ++ HS
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEK 144
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV-VGSPYYVAPEVLRKH-Y 126
HRD+K N L + E +K DFG++ ++ + VG+P+++APEV+++ Y
Sbjct: 145 KIHRDIKAANVL---LSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 201
Query: 127 GPEADVWSAGVILYILLSGVPPFWAETEIGIFRQI-------LEGKIDFESEPWPNISES 179
+AD+WS G+ L G PP + + I LEG N S+
Sbjct: 202 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG----------NYSKP 251
Query: 180 AKDLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
K+ + L++ P R TA E+L H +I+ +
Sbjct: 252 LKEFVEACLNKEPSFRPTAKELLKHKFILRN 282
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 9/162 (5%)
Query: 217 PLDSAVLSRLKHFSAMNKLKKMALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELK 276
+D VL K+++ M + +K+A+ +IA++ N+ ++ LK F +D + G IT +L+
Sbjct: 19 KIDIHVLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLR 78
Query: 277 DGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDK 336
GL+R G ++ L+D D D SG IDY EFLAA + +L ++ + AF FD
Sbjct: 79 KGLERSGL-MLPPNFDLLLDQIDSDGSGNIDYTEFLAAAIDRRQLSKKL-IYCAFRVFDV 136
Query: 337 DASGYITIDELQHAC----KEFGISELHLDD---MIKEIDQD 371
D G IT EL H K I+E ++ MI+E+D++
Sbjct: 137 DNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKN 178
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V + + +Y + + I+ME GG D +++ G E + A +++ I+ ++ HS
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV-VGSPYYVAPEVLRKH-Y 126
HRD+K N L + E +K DFG++ ++ + VG+P+++APEV+++ Y
Sbjct: 125 KIHRDIKAANVL---LSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 181
Query: 127 GPEADVWSAGVILYILLSGVPPFWAETEIGIFRQI-------LEGKIDFESEPWPNISES 179
+AD+WS G+ L G PP + + I LEG N S+
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG----------NYSKP 231
Query: 180 AKDLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
K+ + L++ P R TA E+L H +I+ +
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELLKHKFILRN 262
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 116/252 (46%), Gaps = 43/252 (17%)
Query: 1 MHHLSEHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLM 54
+ HL +H++V+ + D + ED S V++V L G + IVK S+ L+
Sbjct: 81 LKHL-KHENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLV 137
Query: 55 KTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSP 114
++ ++ HS G+ HRDLKP N ++V+ED+ L+ DFGL+ + DE + V +
Sbjct: 138 YQLLRGLKYIHSAGIIHRDLKPSN---VAVNEDSELRILDFGLA--RQADEEMTGYVATR 192
Query: 115 YYVAPEVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE--------- 163
+Y APE++ HY D+WS G I+ LL G F I ++I+E
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV 252
Query: 164 -GKIDFESE--------PWPNISES---------AKDLIRKMLDQNPKRRLTAHEVLCHP 205
KI E P P S A DL+ +ML + +R++A E L H
Sbjct: 253 LAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHA 312
Query: 206 WIVDDKVAPDKP 217
+ D+P
Sbjct: 313 YFSQYHDPEDEP 324
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 25/220 (11%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFD---RIVKKGNYS-----EREAAKLMKTIV 58
H ++V + ++ K + +VM+L GG + D IV KG + E A +++ ++
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKP------DEVFSDVVG 112
+E H G HRD+K N L ED +++ DFG+S F ++V VG
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 113 SPYYVAPEVLR--KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDF-- 168
+P ++APEV+ + Y +AD+WS G+ L +G P+ + + L+
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 243
Query: 169 ----ESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
+ E +S + +I L ++P++R TA E+L H
Sbjct: 244 TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 283
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 37/239 (15%)
Query: 1 MHHLS--EHQHVVRIHDT-----YEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAA 51
+ HL EH +VVR+ D + ++ + +V E + D++ + G +E
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 52 KLMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVV 111
+ + + G+ + HS V HRDLKP+N L V +K DFGL+ Y + VV
Sbjct: 125 MMFQLLRGL-DFLHSHRVVHRDLKPQNIL---VTSSGQIKLADFGLARIYSFQMALTSVV 180
Query: 112 GSPYYVAPEVL-RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFES 170
+ +Y APEVL + Y D+WS G I + P F +++ +IL+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240
Query: 171 EPWP-----------------------NISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
E WP +I E KDL+ K L NP +R++A+ L HP+
Sbjct: 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 45/244 (18%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEG---GELFDRIVKKGNYSEREAAKLMK----TIV 58
+H+++VR++D ++ + +V E + + R V GN L+K ++
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTV--GNTPRGLELNLVKYFQWQLL 118
Query: 59 GVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYV 117
+ CH + HRDLKP+N L +++ LK DFGL+ F P FS V + +Y
Sbjct: 119 QGLAFCHENKILHRDLKPQNLL---INKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYR 175
Query: 118 APEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN 175
AP+VL + Y D+WS G IL +++G P F + + I + WP+
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPS 235
Query: 176 ISESAK------------------------------DLIRKMLDQNPKRRLTAHEVLCHP 205
+++ K D + +L NP RL+A + L HP
Sbjct: 236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHP 295
Query: 206 WIVD 209
W +
Sbjct: 296 WFAE 299
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 103/198 (52%), Gaps = 15/198 (7%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK-----KGNYSEREAAKLMKTIVGVV 61
H +V++ + ++ + + ++IV+EL + G+L R++K K ER K + +
Sbjct: 91 HPNVIKYYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFS-DVVGSPYYVAPE 120
E HS V HRD+KP N + +K D GL F+ + +VG+PYY++PE
Sbjct: 150 EHMHSRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 206
Query: 121 VLRKH-YGPEADVWSAGVILYILLSGVPPFWAETE--IGIFRQILEGKIDFESEPWPNIS 177
+ ++ Y ++D+WS G +LY + + PF+ + + ++I + D+ P + S
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI--EQCDYPPLPSDHYS 264
Query: 178 ESAKDLIRKMLDQNPKRR 195
E + L+ ++ +P++R
Sbjct: 265 EELRQLVNMCINPDPEKR 282
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 43/203 (21%)
Query: 44 NYSEREAAK---LMKT----IVGVVECCH--SLGVFHRDLKPENFLFLSVDE-DAALKAT 93
NY R+ A L+K ++ + C H S+ V HRD+KP N L V+E D LK
Sbjct: 118 NYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVL---VNEADGTLKLC 174
Query: 94 DFGLSVFYKPDEVFSDVVGSPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWA 151
DFG + P E + S YY APE++ +HY D+WS G I ++ G P F
Sbjct: 175 DFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRG 234
Query: 152 ETEIG---------------IFRQILEGKID---FESE--PWPNI--------SESAKDL 183
+ G + R++ D + S+ PW N+ ++ A DL
Sbjct: 235 DNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDL 294
Query: 184 IRKMLDQNPKRRLTAHEVLCHPW 206
+ +L P+ R+ +E LCHP+
Sbjct: 295 LSALLQYLPEERMKPYEALCHPY 317
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V + + +Y + + I+ME GG D +++ G E + A +++ I+ ++ HS
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEK 139
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV-VGSPYYVAPEVLRKH-Y 126
HRD+K N L + E +K DFG++ ++ + VG+P+++APEV+++ Y
Sbjct: 140 KIHRDIKAANVL---LSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 127 GPEADVWSAGVILYILLSGVPPFWAETEIGIFRQI-------LEGKIDFESEPWPNISES 179
+AD+WS G+ L G PP + + I LEG N S+
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG----------NYSKP 246
Query: 180 AKDLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
K+ + L++ P R TA E+L H +I+ +
Sbjct: 247 LKEFVEACLNKEPSFRPTAKELLKHKFILRN 277
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V + + +Y + + I+ME GG D +++ G E + A +++ I+ ++ HS
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSD-VVGSPYYVAPEVLRKH-Y 126
HRD+K N L + E +K DFG++ ++ + VG+P+++APEV+++ Y
Sbjct: 125 KIHRDIKAANVL---LSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 127 GPEADVWSAGVILYILLSGVPPFWAETEIGIFRQI-------LEGKIDFESEPWPNISES 179
+AD+WS G+ L G PP + + I LEG N S+
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG----------NYSKP 231
Query: 180 AKDLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
K+ + L++ P R TA E+L H +I+ +
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELLKHKFILRN 262
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 32/240 (13%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H++++ + +H++ E E +L + K + S R + ++ V CH
Sbjct: 91 QHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH 149
Query: 66 SLGVFHRDLKPENFLFLSVD--EDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVL 122
S HRDLKP+N L D E LK DFGL+ F P F+ + + +Y PE+L
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEIL 209
Query: 123 --RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE-- 178
+HY D+WS I +L P F ++EI +I E + WP ++
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALP 269
Query: 179 ---------SAKDLIR---------------KMLDQNPKRRLTAHEVLCHPWIVDDKVAP 214
K L R ML+ +P +R++A L HP+ + P
Sbjct: 270 DWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDFDP 329
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 115/252 (45%), Gaps = 43/252 (17%)
Query: 1 MHHLSEHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLM 54
+ HL +H++V+ + D + ED S V++V L G + IVK S+ L+
Sbjct: 73 LKHL-KHENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLV 129
Query: 55 KTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSP 114
++ ++ HS G+ HRDLKP N ++V+ED L+ DFGL+ + DE + V +
Sbjct: 130 YQLLRGLKYIHSAGIIHRDLKPSN---VAVNEDCELRILDFGLA--RQADEEMTGYVATR 184
Query: 115 YYVAPEVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE--------- 163
+Y APE++ HY D+WS G I+ LL G F I ++I+E
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV 244
Query: 164 -GKIDFESE--------PWPNISES---------AKDLIRKMLDQNPKRRLTAHEVLCHP 205
KI E P P S A DL+ +ML + +R++A E L H
Sbjct: 245 LAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHA 304
Query: 206 WIVDDKVAPDKP 217
+ D+P
Sbjct: 305 YFSQYHDPEDEP 316
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 90/158 (56%), Gaps = 9/158 (5%)
Query: 222 VLSRLKHFSAMNKLKKMALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKR 281
VL K++ + K +K+A+ +IA++ N+ ++ LK F ++D D G IT ++LK GL++
Sbjct: 21 VLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEK 80
Query: 282 VGSQLMESEIKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDASGY 341
G +L L+D D D SG IDY EF+AA L +L ++ + AF FD D G
Sbjct: 81 DGLKL-PYNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKL-IYCAFRVFDVDNDGE 138
Query: 342 ITIDELQH----ACKEFGISELHLD---DMIKEIDQDD 372
IT EL H K+ I++ ++ MI+++D+++
Sbjct: 139 ITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNN 176
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 259 FKMIDTDNSGTITFDELK----DGLKRVG-SQLMESEIKDLMDAADIDNSGTIDYGEF 311
F++ D DN G IT EL +G K+ +Q + +K ++ D +N G ID+ EF
Sbjct: 128 FRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEF 185
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 15/222 (6%)
Query: 7 HQHVVRIHDTYEDKSCV----HIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVE 62
H +V ++DT E ++ +IVME +G L D + +G + + A +++ +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGL--SVFYKPDEVF--SDVVGSPYYVA 118
H G+ HRD+KP N L + + A+K DFG+ ++ + V + V+G+ Y++
Sbjct: 131 FSHQNGIIHRDVKPANILISATN---AVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLS 187
Query: 119 PEVLRK-HYGPEADVWSAGVILYILLSGVPPFWAETEIGI-FRQILEGKIDFESEPWPNI 176
PE R +DV+S G +LY +L+G PPF ++ + + ++ + E I S +
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP-PSARHEGL 246
Query: 177 SESAKDLIRKMLDQNPKRRL-TAHEVLCHPWIVDDKVAPDKP 217
S ++ K L +NP+ R TA E+ V + P+ P
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 46/259 (17%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 108 KHENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 165
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 166 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 220
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQIL--------------- 162
E++ HY D+WS G I+ LL+G F I +QI+
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMP 280
Query: 163 --EGKIDFESEP----------WPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD- 209
E + S P + + A DL+ KML + +R+TA E L HP+
Sbjct: 281 SHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQY 340
Query: 210 ---DKVAPDKPLDSAVLSR 225
D +P D + SR
Sbjct: 341 HDPDDEPESEPYDQSFESR 359
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Query: 245 ERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSG 304
++L EE+I KE F + D D G IT +L ++ +G E+E++D+++ D +G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNG 362
Query: 305 TIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHL 361
TID+ +FL + + EE + AF F KD +GYI+ +L+H G +++ +
Sbjct: 363 TIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEV 422
Query: 362 DDMIKE--IDQD 371
D+MI+E ID D
Sbjct: 423 DEMIREAGIDGD 434
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A+ L+EE+I KE F + D D G IT +EL ++ + E E++D++ D D +
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 304 GTIDYGEFLA-ATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
GTI++ EFL+ + + EE L AF FDKD +GYI+ EL+H G +++
Sbjct: 61 GTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEE 120
Query: 361 LDDMIKEIDQD 371
++ MIKE D D
Sbjct: 121 VEQMIKEADLD 131
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFLAA 314
LKE FK+ D D +G I+ EL+ + +G +L + E++ ++ AD+D G ++Y EF+
Sbjct: 85 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 144
Query: 315 TLHL 318
+ +
Sbjct: 145 MMTV 148
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 33/237 (13%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHS 66
H+++V + + + K ++V E + L D + + K + I+ + CHS
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLRK- 124
+ HRD+KPEN L V + +K DFG + P EV+ D V + +Y APE+L
Sbjct: 143 HNIIHRDIKPENIL---VSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGD 199
Query: 125 -HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDF--------------- 168
YG DVW+ G ++ + G P F +++I I+ +
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259
Query: 169 --------ESEP----WPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVA 213
E EP +P +SE DL +K L +P +R E+L H + D A
Sbjct: 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFA 316
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 117/260 (45%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED+ LK DFGL D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDSELKILDFGLC--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D ++ SR
Sbjct: 312 HDPDDEPVAD-PYDQSLESR 330
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L EE+ ++E F + DTD SGTI ELK ++ +G + + EIK ++ D D SGTI
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 307 DYGEFLA-ATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDD 363
D+ EFL T + + + E ++ AF FD D +G I+ L+ KE G +++ L +
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQE 121
Query: 364 MIKEIDQD 371
MI E D+D
Sbjct: 122 MIDEADRD 129
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 237 KMALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMD 296
+M + ER + EEI + F++ D D +G I+F LK K +G + + E+++++D
Sbjct: 68 QMMTAKMGERDSREEI---MKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMID 124
Query: 297 AADIDNSGTIDYGEFL 312
AD D G ++ EF
Sbjct: 125 EADRDGDGEVNEEEFF 140
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PYDQSFESR 330
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 15/222 (6%)
Query: 7 HQHVVRIHDTYEDKSCV----HIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVE 62
H +V ++DT E ++ +IVME +G L D + +G + + A +++ +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGL--SVFYKPDEV--FSDVVGSPYYVA 118
H G+ HRD+KP N + + + A+K DFG+ ++ + V + V+G+ Y++
Sbjct: 131 FSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 119 PEVLRK-HYGPEADVWSAGVILYILLSGVPPFWAETEIGI-FRQILEGKIDFESEPWPNI 176
PE R +DV+S G +LY +L+G PPF ++ + + ++ + E I S +
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP-PSARHEGL 246
Query: 177 SESAKDLIRKMLDQNPKRRL-TAHEVLCHPWIVDDKVAPDKP 217
S ++ K L +NP+ R TA E+ V + P+ P
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 15/222 (6%)
Query: 7 HQHVVRIHDTYEDKSCV----HIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVE 62
H +V ++DT E ++ +IVME +G L D + +G + + A +++ +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGL--SVFYKPDEV--FSDVVGSPYYVA 118
H G+ HRD+KP N + + + A+K DFG+ ++ + V + V+G+ Y++
Sbjct: 131 FSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 119 PEVLRK-HYGPEADVWSAGVILYILLSGVPPFWAETEIGI-FRQILEGKIDFESEPWPNI 176
PE R +DV+S G +LY +L+G PPF ++ + + ++ + E I S +
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP-PSARHEGL 246
Query: 177 SESAKDLIRKMLDQNPKRRL-TAHEVLCHPWIVDDKVAPDKP 217
S ++ K L +NP+ R TA E+ V + P+ P
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDXELKILDFGLA--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PYDQSFESR 330
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 117/260 (45%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 142
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED+ LK DFGL+ D+ + V + +Y AP
Sbjct: 143 GLKYIHSADIIHRDLKPSN---LAVNEDSELKILDFGLA--RHTDDEMTGYVATRWYRAP 197
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 318 HDPDDEPVAD-PYDQSFESR 336
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 119
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVL- 122
HS V HRDLKP+N L ++ + A+K DFGL+ F P ++ V + +Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 13/204 (6%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
++ R +Y + + I+ME GG D ++K G E A +++ I+ ++ HS
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSER 136
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSD-VVGSPYYVAPEVLRKH-Y 126
HRD+K N L + E +K DFG++ ++ + VG+P+++APEV+++ Y
Sbjct: 137 KIHRDIKAANVL---LSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 193
Query: 127 GPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPW--PNISESAKDLI 184
+AD+WS G+ L G PP +++ R + I S P S+ K+ +
Sbjct: 194 DFKADIWSLGITAIELAKGEPP---NSDLHPMRVLF--LIPKNSPPTLEGQHSKPFKEFV 248
Query: 185 RKMLDQNPKRRLTAHEVLCHPWIV 208
L+++P+ R TA E+L H +I
Sbjct: 249 EACLNKDPRFRPTAKELLKHKFIT 272
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 117/260 (45%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 138
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED+ LK DFGL+ D+ + V + +Y AP
Sbjct: 139 GLKYIHSADIIHRDLKPSN---LAVNEDSELKILDFGLA--RHTDDEMTGYVATRWYRAP 193
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 314 HDPDDEPVAD-PYDQSFESR 332
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PFDQSFESR 330
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
+ L EE+I KE F + D DN+G+I+ EL ++ +G E+E+ DLM+ D+D +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 304 GTIDYGEFLA-ATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG 355
I++ EFLA + L + E+ LL AF FDK+ G I+ EL+H G
Sbjct: 61 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 113
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 330 AFSFFDKDASGYITIDELQHACKEFGI--SELHLDDMIKEIDQD 371
AF+ FDKD +G I+ EL + G+ SE ++D++ EID D
Sbjct: 15 AFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVD 58
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 126
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVL- 122
HS V HRDLKP+N L ++ + A+K DFGL+ F P ++ V + +Y APE+L
Sbjct: 127 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 243
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 244 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 45/224 (20%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
V+IVMEL + ++++ ER + L + +VG+ + HS G+ HRDLKP N +
Sbjct: 104 VYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGI-KHLHSAGIIHRDLKPSNIV-- 158
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVILYI 141
V DA LK DFGL+ + + V + YY APEV L Y D+WS GVI+
Sbjct: 159 -VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
Query: 142 LLSGVPPFWAETEIGIFRQILEG----------------KIDFESEP----------WPN 175
++ G F I + +++E + E+ P +P+
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 277
Query: 176 I------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + A+DL+ KML + +R++ E L HP+I
Sbjct: 278 VLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLA-FC 119
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKPEN L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 120 HSHRVLHRDLKPENLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 45/224 (20%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
V+IVMEL + ++++ ER + L + +VG+ + HS G+ HRDLKP N +
Sbjct: 104 VYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGI-KHLHSAGIIHRDLKPSNIV-- 158
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVILYI 141
V DA LK DFGL+ + + V + YY APEV L Y D+WS GVI+
Sbjct: 159 -VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
Query: 142 LLSGVPPFWAETEIGIFRQILEG----------------KIDFESEP----------WPN 175
++ G F I + +++E + E+ P +P+
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 277
Query: 176 I------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + A+DL+ KML + +R++ E L HP+I
Sbjct: 278 VLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 120
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKPEN L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 121 HSHRVLHRDLKPENLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PYDQSFESR 330
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 120
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKPEN L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 121 HSHRVLHRDLKPENLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 119
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P ++ V + +Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 118
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P ++ V + +Y APE+L
Sbjct: 119 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFLIYQILR 132
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 133 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 187
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 308 HDPDDEPVAD-PYDQSFESR 326
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 119
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P ++ V + +Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 138
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 139 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 193
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 314 HDPDDEPVAD-PYDQSFESR 332
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL-SFC 119
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P ++ V + +Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 119
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P ++ V + +Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 148
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 149 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 203
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 324 HDPDDEPVAD-PYDQSFESR 342
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 118
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P ++ V + +Y APE+L
Sbjct: 119 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 120
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P ++ V + +Y APE+L
Sbjct: 121 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 177
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 147
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 148 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 202
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 322
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 323 HDPDDEPVAD-PYDQSFESR 341
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 147
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 148 GLKYIHSADIIHRDLKPSN---LAVNEDXELKILDFGLA--RHTDDEMTGYVATRWYRAP 202
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 322
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 323 HDPDDEPVAD-PYDQSFESR 341
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PYDQSFESR 330
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 148
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 149 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 203
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 324 HDPDDEPVAD-PYDQSFESR 342
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 148
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 149 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 203
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 324 HDPDDEPVAD-PYDQSFESR 342
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 118
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P ++ V + +Y APE+L
Sbjct: 119 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 143
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 144 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 198
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 319 HDPDDEPVAD-PYDQSFESR 337
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 121
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKPEN L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 122 HSHRVLHRDLKPENLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 138
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 139 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 193
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 314 HDPDDEPVAD-PYDQSFESR 332
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMAGFVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PYDQSFESR 330
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMAGFVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PYDQSFESR 330
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PYDQSFESR 330
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 6 EHQHVVRIHDTYEDKSCV----HIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVV 61
H +V ++DT E ++ +IVME +G L D + +G + + A +++ +
Sbjct: 87 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 146
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGL--SVFYKPDEV--FSDVVGSPYYV 117
H G+ HRD+KP N + + + A+K DFG+ ++ + V + V+G+ Y+
Sbjct: 147 NFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 203
Query: 118 APEVLRK-HYGPEADVWSAGVILYILLSGVPPFWAETEIGI-FRQILEGKIDFESEPWPN 175
+PE R +DV+S G +LY +L+G PPF ++ + + ++ + E I S
Sbjct: 204 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP-PSARHEG 262
Query: 176 ISESAKDLIRKMLDQNPKRR 195
+S ++ K L +NP+ R
Sbjct: 263 LSADLDAVVLKALAKNPENR 282
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PYDQSFESR 330
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 142
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 143 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 197
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 318 HDPDDEPVAD-PYDQSFESR 336
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 141
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 142 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 196
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 317 HDPDDEPVAD-PYDQSFESR 335
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 126
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P ++ V + +Y APE+L
Sbjct: 127 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 243
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 244 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PTDQSFESR 330
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 89 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 146
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 147 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 201
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 261
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 262 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 321
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 322 HDPDDEPVAD-PYDQSFESR 340
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 141
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 142 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 196
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 317 HDPDDEPVAD-PYDQSFESR 335
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 78 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 135
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 136 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 190
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 250
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 251 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 310
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 311 HDPDDEPVAD-PYDQSFESR 329
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 141
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 142 GLKYIHSADIIHRDLKPSN---LAVNEDXELKILDFGLA--RHTDDEMTGYVATRWYRAP 196
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 317 HDPDDEPVAD-PYDQSFESR 335
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 142
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 143 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 197
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 318 HDPDDEPVAD-PYDQSFESR 336
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGXVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PYDQSFESR 330
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 122
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKPEN L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 123 HSHRVLHRDLKPENLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 159
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 160 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 214
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 274
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 275 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 334
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 335 HDPDDEPVAD-PYDQSFESR 353
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 123
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P ++ V + +Y APE+L
Sbjct: 124 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 180
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 240
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 241 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PYDQSFESR 330
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 141
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 142 GLKYIHSADIIHRDLKPSN---LAVNEDXELKILDFGLA--RHTDDEMTGYVATRWYRAP 196
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 317 HDPDDEPVAD-PYDQSFESR 335
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 133
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 134 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 188
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 308
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 309 HDPDDEPVAD-PYDQSFESR 327
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 138
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 139 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 193
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 314 HDPDDEPVAD-PYDQSFESR 332
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 119
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 115/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 159
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ V + +Y AP
Sbjct: 160 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMXGYVATRWYRAP 214
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 274
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 275 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 334
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 335 HDPDDEPVAD-PYDQSFESR 353
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 133
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 134 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 188
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 308
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 309 HDPDDEPVAD-PYDQSFESR 327
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 142
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 143 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 197
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 258 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 318 HDPDDEPVAD-PYDQSFESR 336
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 156
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 157 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 211
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 272 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 332 HDPDDEPVAD-PYDQSFESR 350
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 119/260 (45%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 143
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ + DE+ + V + +Y AP
Sbjct: 144 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLAR-HTADEM-TGYVATRWYRAP 198
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D ++ SR
Sbjct: 319 HDPDDEPVAD-PYDQSLESR 337
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 31/174 (17%)
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVL 122
CHS V HRDLKP+N L ++ + A+K DFGL+ F P ++ V + +Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 123 R--KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS--- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 178 ----------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 13/205 (6%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIVGVVECCHSL 67
VV + YE K + +V+ L GG+L I G + E A I +E H
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 68 GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KHY 126
+ +RDLKPEN L +D+ ++ +D GL+V + VG+ Y+APEV++ + Y
Sbjct: 306 RIVYRDLKPENIL---LDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERY 362
Query: 127 GPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWP-NISESAKDLIR 185
D W+ G +LY +++G PF + + I R+ +E + E + S A+ L
Sbjct: 363 TFSPDWWALGCLLYEMIAGQSPF-QQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCS 421
Query: 186 KMLDQNPKRRL-----TAHEVLCHP 205
++L ++P RL +A EV HP
Sbjct: 422 QLLCKDPAERLGCRGGSAREVKEHP 446
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 155
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 156 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 210
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 270
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 271 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 330
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 331 HDPDDEPVAD-PYDQSFESR 349
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PQDQSFESR 330
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 132
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 133 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 187
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 308 HDPDDEPVAD-PYDQSFESR 326
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 156
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 157 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 211
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 272 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 332 HDPDDEPVAD-PYDQSFESR 350
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 77 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 134
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 135 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 189
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 249
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 250 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 309
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 310 HDPDDEPVAD-PYDQSFESR 328
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 132
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 133 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 187
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 248 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 308 HDPDDEPVAD-PYDQSFESR 326
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 155
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 156 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 210
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 270
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 271 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 330
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 331 HDPDDEPVAD-PYDQSFESR 349
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PRDQSFESR 330
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 132
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ + V + +Y AP
Sbjct: 133 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMAGFVATRWYRAP 187
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 308 HDPDDEPVAD-PYDQSFESR 326
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 119
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA-FC 121
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 122 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 119
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 118
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 119 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 13/205 (6%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIVGVVECCHSL 67
VV + YE K + +V+ L GG+L I G + E A I +E H
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 68 GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLR-KHY 126
+ +RDLKPEN L +D+ ++ +D GL+V + VG+ Y+APEV++ + Y
Sbjct: 306 RIVYRDLKPENIL---LDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERY 362
Query: 127 GPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWP-NISESAKDLIR 185
D W+ G +LY +++G PF + + I R+ +E + E + S A+ L
Sbjct: 363 TFSPDWWALGCLLYEMIAGQSPF-QQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCS 421
Query: 186 KMLDQNPKRRL-----TAHEVLCHP 205
++L ++P RL +A EV HP
Sbjct: 422 QLLCKDPAERLGCRGGSAREVKEHP 446
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 120
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 121 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 120
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 121 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 118
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 119 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 119
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 123
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 124 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 180
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 240
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 241 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA-FC 122
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 123 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 118/260 (45%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 143
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ + DE+ + V + +Y AP
Sbjct: 144 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLAR-HTADEM-TGYVATRWYRAP 198
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 319 HDPDDEPVAD-PYDQSFESR 337
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 122
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 123 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 122
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 123 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 121
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 122 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E + D G + L + + G+ C
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FC 121
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 122 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 116/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK D+GL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDYGLA--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PYDQSFESR 330
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 118/260 (45%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 143
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ + DE+ + V + +Y AP
Sbjct: 144 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLAR-HTADEM-TGYVATRWYRAP 198
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 319 HDPDDEPVAD-PYDQSSESR 337
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 21 SCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFL 80
+ V+IV E E ++++G E A M ++ ++ HS V HRDLKP N L
Sbjct: 95 NSVYIVQEYMETD--LANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN-L 151
Query: 81 FLSVDEDAALKATDFGLSVFYKPDEV----FSDVVGSPYYVAPEVL--RKHYGPEADVWS 134
F++ ED LK DFGL+ P S+ + + +Y +P +L +Y D+W+
Sbjct: 152 FINT-EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWA 210
Query: 135 AGVILYILLSGVPPFWAETEIGIFRQILEG--------------------KIDFESEP-- 172
AG I +L+G F E+ + ILE + D +EP
Sbjct: 211 AGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDM-TEPHK 269
Query: 173 -----WPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPL 218
P IS A D + ++L +P RLTA E L HP++ D+P+
Sbjct: 270 PLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDEPI 320
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 115/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 156
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DFGL+ D+ V + +Y AP
Sbjct: 157 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMXGXVATRWYRAP 211
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 272 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 332 HDPDDEPVAD-PYDQSFESR 350
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 22/218 (10%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSER--EAAKLMKTIVGVVEC 63
EH +V+R T +D+ +I +ELC V++ +++ E L++ +
Sbjct: 76 EHPNVIRYFCTEKDRQFQYIAIELCAA--TLQEYVEQKDFAHLGLEPITLLQQTTSGLAH 133
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKA--TDFG----LSVFYKPDEVFSDVVGSPYYV 117
HSL + HRDLKP N L + +KA +DFG L+V S V G+ ++
Sbjct: 134 LHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI 193
Query: 118 APEVL----RKHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQ--ILEGKIDFES 170
APE+L +++ D++SAG + Y ++S G PF + RQ IL G +
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ----RQANILLGACSLDC 249
Query: 171 -EPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
P + A++LI KM+ +P++R +A VL HP+
Sbjct: 250 LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 217 PLDSAVLSRLKHFSAMNKLKKMALRVIAERL-NEEEIGGLKELFKMIDTDNSGTITFDEL 275
P + + ++ F KL + AL +A +L ++EE L ++F+ ID + G + EL
Sbjct: 26 PSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQEL 85
Query: 276 KDGLKRVGSQ--------LMESEIKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENL 327
DG ++ + +ESE+ ++ AAD D +G IDY EF+ + L ++ L
Sbjct: 86 IDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKL 145
Query: 328 LSAFSFFDKDASGYITIDELQHACKEFGISELH---LDDMIKEIDQDD 372
SAF FD+D +G I++DEL FG+ L +MI ID ++
Sbjct: 146 ESAFQKFDQDGNGKISVDELASV---FGLDHLESKTWKEMISGIDSNN 190
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 255 LKELFKMIDTDNSGTITFDELKD--GLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEF 311
L+ F+ D D +G I+ DEL GL + S+ K+++ D +N G +D+ EF
Sbjct: 145 LESAFQKFDQDGNGKISVDELASVFGLDHLESKTW----KEMISGIDSNNDGDVDFEEF 199
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 7 HQHVVRIHDTYEDKSCV----HIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVE 62
H +V ++DT E ++ +IVME +G L D + +G + + A +++ +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGL--SVFYKPDEV--FSDVVGSPYYVA 118
H G+ HRD+KP N + + + A+K DFG+ ++ + V + V+G+ Y++
Sbjct: 131 FSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 119 PEVLRK-HYGPEADVWSAGVILYILLSGVPPFWAETEIGI-FRQILEGKIDFESEPWPNI 176
PE R +DV+S G +LY +L+G PPF ++ + ++ + E I S +
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIP-PSARHEGL 246
Query: 177 SESAKDLIRKMLDQNPKRRL-TAHEVLCHPWIVDDKVAPDKP 217
S ++ K L +NP+ R TA E+ V + P+ P
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 34/233 (14%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEG--GELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ D ++ +++V E D G + L + + G+ C
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA-FC 122
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVLR 123
HS V HRDLKP+N L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 123 HSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 124 --KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS---- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 178 ---------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 107/214 (50%), Gaps = 16/214 (7%)
Query: 8 QHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK----KGNYSEREAAKLMKTIVGVVEC 63
+ +V + +E K+ + +VM + GG++ I + E A IV +E
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFS-DVVGSPYYVAPE-V 121
H + +RDLKPEN L +D+D ++ +D GL+V K + + G+P ++APE +
Sbjct: 305 LHQRNIIYRDLKPENVL---LDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 122 LRKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESA 180
L + Y D ++ GV LY +++ PF A E + + L+ ++ ++ +P+ S ++
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-KVENKELKQRVLEQAVTYPDKFSPAS 420
Query: 181 KDLIRKMLDQNPKRRLTAHEVLC-----HPWIVD 209
KD +L ++P++RL + C HP D
Sbjct: 421 KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 45/224 (20%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
V+IVMEL + ++++ ER + L + +VG+ + HS G+ HRDLKP N +
Sbjct: 104 VYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGI-KHLHSAGIIHRDLKPSNIV-- 158
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVILYI 141
V DA LK DFGL+ + + V + YY APEV L Y D+WS G I+
Sbjct: 159 -VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 142 LLSGVPPFWAETEIGIFRQILEG----------------KIDFESEP----------WPN 175
++ G F I + +++E + E+ P +P+
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 277
Query: 176 I------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + A+DL+ KML + +R++ E L HP+I
Sbjct: 278 VLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 107/214 (50%), Gaps = 16/214 (7%)
Query: 8 QHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK----KGNYSEREAAKLMKTIVGVVEC 63
+ +V + +E K+ + +VM + GG++ I + E A IV +E
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFS-DVVGSPYYVAPE-V 121
H + +RDLKPEN L +D+D ++ +D GL+V K + + G+P ++APE +
Sbjct: 305 LHQRNIIYRDLKPENVL---LDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 122 LRKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESA 180
L + Y D ++ GV LY +++ PF A E + + L+ ++ ++ +P+ S ++
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-KVENKELKQRVLEQAVTYPDKFSPAS 420
Query: 181 KDLIRKMLDQNPKRRLTAHEVLC-----HPWIVD 209
KD +L ++P++RL + C HP D
Sbjct: 421 KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 107/214 (50%), Gaps = 16/214 (7%)
Query: 8 QHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK----KGNYSEREAAKLMKTIVGVVEC 63
+ +V + +E K+ + +VM + GG++ I + E A IV +E
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFS-DVVGSPYYVAPE-V 121
H + +RDLKPEN L +D+D ++ +D GL+V K + + G+P ++APE +
Sbjct: 305 LHQRNIIYRDLKPENVL---LDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 122 LRKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESA 180
L + Y D ++ GV LY +++ PF A E + + L+ ++ ++ +P+ S ++
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-KVENKELKQRVLEQAVTYPDKFSPAS 420
Query: 181 KDLIRKMLDQNPKRRLTAHEVLC-----HPWIVD 209
KD +L ++P++RL + C HP D
Sbjct: 421 KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 74/169 (43%), Gaps = 29/169 (17%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL-- 122
HS+G+ HRD+KP+N L LK DFG + E + S YY APE++
Sbjct: 158 HSIGICHRDIKPQNLLL--DPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFG 215
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQI-------------------LE 163
+Y D+WS G ++ L+ G P F E+ I +I +E
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYME 275
Query: 164 GKI-DFESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
K P+ P A DLI ++L+ P RLTA E LCHP+
Sbjct: 276 HKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 36/226 (15%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREA---AKLMKTIVGVVEC 63
H +++ + D + KS + +V + E + I+K + + A ++ T+ G+ E
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLMTLQGL-EY 127
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVL 122
H + HRDLKP N L +DE+ LK DFGL+ F P+ + V + +Y APE+L
Sbjct: 128 LHQHWILHRDLKPNNLL---LDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELL 184
Query: 123 --RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE-- 178
+ YG D+W+ G IL LL VP ++++ +I E E WP++
Sbjct: 185 FGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 244
Query: 179 -----------------SAK-----DLIRKMLDQNPKRRLTAHEVL 202
SA DLI+ + NP R+TA + L
Sbjct: 245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQAL 290
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 31/174 (17%)
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS-VFYKPDEVFSDVVGSPYYVAPEVL 122
CHS V HRDLKP+N L ++ + A+K DFGL+ F P + V + +Y APE+L
Sbjct: 122 CHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 123 R--KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNIS--- 177
K+Y D+WS G I +++ F ++EI +I + WP ++
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 238
Query: 178 ----------------------ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
E + L+ +ML +P +R++A L HP+ D
Sbjct: 239 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 107/214 (50%), Gaps = 16/214 (7%)
Query: 8 QHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK----KGNYSEREAAKLMKTIVGVVEC 63
+ +V + +E K+ + +VM + GG++ I + E A IV +E
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFS-DVVGSPYYVAPE-V 121
H + +RDLKPEN L +D+D ++ +D GL+V K + + G+P ++APE +
Sbjct: 305 LHQRNIIYRDLKPENVL---LDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 122 LRKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPN-ISESA 180
L + Y D ++ GV LY +++ PF A E + + L+ ++ ++ +P+ S ++
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-KVENKELKQRVLEQAVTYPDKFSPAS 420
Query: 181 KDLIRKMLDQNPKRRLTAHEVLC-----HPWIVD 209
KD +L ++P++RL + C HP D
Sbjct: 421 KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 7 HQHVVRIHDTYEDKSCV----HIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVE 62
H +V ++ T E ++ +IVME +G L D + +G + + A +++ +
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGL--SVFYKPDEV--FSDVVGSPYYVA 118
H G+ HRD+KP N + + + A+K DFG+ ++ + V + V+G+ Y++
Sbjct: 131 FSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 119 PEVLRK-HYGPEADVWSAGVILYILLSGVPPFWAETEIGI-FRQILEGKIDFESEPWPNI 176
PE R +DV+S G +LY +L+G PPF ++ + + ++ + E I S +
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP-PSARHEGL 246
Query: 177 SESAKDLIRKMLDQNPKRRL-TAHEVLCHPWIVDDKVAPDKP 217
S ++ K L +NP+ R TA E+ V + P+ P
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 45/239 (18%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V T E+ V++VMEL + +++ ER + L + + G+ + HS G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLCGI-KHLHSAG 146
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYG 127
+ HRDLKP N + V D LK DFGL+ + + + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIV---VKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYA 203
Query: 128 PEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEG----------------KIDFESE 171
D+WS G I+ L+ G F I + +++E + E+
Sbjct: 204 ANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENR 263
Query: 172 P-WPNI------------SES---------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV 208
P +P I SES A+DL+ KML +P +R++ E L HP+I
Sbjct: 264 PKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT 322
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 104/232 (44%), Gaps = 45/232 (19%)
Query: 16 TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLK 75
T E+ V++VMEL + +++ ER + L + + G+ + HS G+ HRDLK
Sbjct: 95 TLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLK 151
Query: 76 PENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWS 134
P N + V D LK DFGL+ + + + V + YY APEV L Y D+WS
Sbjct: 152 PSNIV---VKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 208
Query: 135 AGVILYILLSGVPPFWAETEIGIFRQILEG----------------KIDFESEP-WPNI- 176
G I+ L+ G F I + +++E + E+ P +P I
Sbjct: 209 VGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIA 268
Query: 177 -----------SES---------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV 208
SES A+DL+ KML +P +R++ E L HP+I
Sbjct: 269 FEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT 320
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 115/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK FGL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILGFGLA--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PYDQSFESR 330
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 115/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK DF L+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFYLA--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PYDQSFESR 330
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNY---SEREAAKLMKTI 57
+H +H+++V+ ++ + + I ME GG L + K +E+ K I
Sbjct: 72 LHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI 131
Query: 58 VGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFG----LSVFYKPDEVFSDVVGS 113
+ ++ H + HRD+K +N L + LK +DFG L+ E F+ G+
Sbjct: 132 LEGLKYLHDNQIVHRDIKGDNVLINTYS--GVLKISDFGTSKRLAGINPCTETFT---GT 186
Query: 114 PYYVAPEVLRKH---YGPEADVWSAGVILYILLSGVPPFW--AETEIGIFRQILEGKIDF 168
Y+APE++ K YG AD+WS G + + +G PPF+ E + +F+ G
Sbjct: 187 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKV 243
Query: 169 ESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVL 202
E ++S AK I K + +P +R A+++L
Sbjct: 244 HPEIPESMSAEAKAFILKCFEPDPDKRACANDLL 277
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 115/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK D GL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDAGLA--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PYDQSFESR 330
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 115/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK D GL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDRGLA--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PYDQSFESR 330
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNY---SEREAAKLMKTI 57
+H +H+++V+ ++ + + I ME GG L + K +E+ K I
Sbjct: 58 LHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI 117
Query: 58 VGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFG----LSVFYKPDEVFSDVVGS 113
+ ++ H + HRD+K +N L + LK +DFG L+ E F+ G+
Sbjct: 118 LEGLKYLHDNQIVHRDIKGDNVLINTYS--GVLKISDFGTSKRLAGINPCTETFT---GT 172
Query: 114 PYYVAPEVLRKH---YGPEADVWSAGVILYILLSGVPPFW--AETEIGIFRQILEGKIDF 168
Y+APE++ K YG AD+WS G + + +G PPF+ E + +F+ G
Sbjct: 173 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKV 229
Query: 169 ESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVL 202
E ++S AK I K + +P +R A+++L
Sbjct: 230 HPEIPESMSAEAKAFILKCFEPDPDKRACANDLL 263
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 45/224 (20%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
V+IVMEL + ++++ ER + L + + G+ + HS G+ HRDLKP N +
Sbjct: 104 VYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIV-- 158
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVILYI 141
V DA LK DFGL+ + + V + YY APEV L Y D+WS G I+
Sbjct: 159 -VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 142 LLSGVPPFWAETEIGIFRQILEG----------------KIDFESEP----------WPN 175
++ G F I + +++E + E+ P +P+
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 277
Query: 176 I------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + A+DL+ KML + +R++ E L HP+I
Sbjct: 278 VLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 45/224 (20%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
V+IVMEL + ++++ ER + L + + G+ + HS G+ HRDLKP N +
Sbjct: 104 VYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIV-- 158
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVILYI 141
V DA LK DFGL+ + + V + YY APEV L Y D+WS G I+
Sbjct: 159 -VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 142 LLSGVPPFWAETEIGIFRQILEG----------------KIDFESEP----------WPN 175
++ G F I + +++E + E+ P +P+
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 277
Query: 176 I------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + A+DL+ KML + +R++ E L HP+I
Sbjct: 278 VLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 101/232 (43%), Gaps = 47/232 (20%)
Query: 16 TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLK 75
T E+ V++VMEL + ++++ ER + L + + G+ + HS G+ HRDLK
Sbjct: 97 TLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLK 153
Query: 76 PENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWS 134
P N + V D LK DFGL+ + + V + YY APEV L Y D+WS
Sbjct: 154 PSNIV---VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 135 AGVIL------YILLSG-----------------VPPFWAETEIGIFRQILEGKIDFESE 171
G I+ IL G P F + + + R +E + +
Sbjct: 211 VGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVENRPKYAGL 269
Query: 172 PWPNI----------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+P + + A+DL+ KML +P +R++ + L HP+I
Sbjct: 270 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 115/260 (44%), Gaps = 48/260 (18%)
Query: 6 EHQHVVRIHDTY------EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H++V+ + D + E+ + V++V L G + IVK ++ L+ I+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
++ HS + HRDLKP N L+V+ED LK D GL+ D+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSN---LAVNEDCELKILDGGLA--RHTDDEMTGYVATRWYRAP 191
Query: 120 EVLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE----------GKID 167
E++ HY D+WS G I+ LL+G F I + IL KI
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 168 FESE----------PWPNISES-------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV-- 208
ES P N + A DL+ KML + +R+TA + L H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 ---DDKVAPDKPLDSAVLSR 225
DD+ D P D + SR
Sbjct: 312 HDPDDEPVAD-PYDQSFESR 330
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 47/239 (19%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V T E+ V++VMEL + ++++ ER + L + + G+ + HS G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGI-KHLHSAG 146
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYG 127
+ HRDLKP N + V D LK DFGL+ + + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIV---VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 128 PEADVWSAGVIL------YILLSG-----------------VPPFWAETEIGIFRQILEG 164
D+WS G I+ IL G P F + + + R +E
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVEN 262
Query: 165 KIDFESEPWPNI----------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + +P + + A+DL+ KML +P +R++ + L HP+I
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
EH +V + +++D+ + +V++L GG+L + + ++ E + +V ++
Sbjct: 73 EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ 132
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH 125
+ + HRD+KP+N L +DE + TDF ++ + + + G+ Y+APE+
Sbjct: 133 NQRIIHRDMKPDNIL---LDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSR 189
Query: 126 YGP----EADVWSAGVILYILLSGVPPF--WAETEIGIFRQILEGKIDFESEPWPNISES 179
G D WS GV Y LL G P+ + T E + W S+
Sbjct: 190 KGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAW---SQE 246
Query: 180 AKDLIRKMLDQNPKRRLTA-HEVLCHPWIVD 209
L++K+L+ NP +R + +V P++ D
Sbjct: 247 MVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 47/239 (19%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V T E+ V++VMEL + ++++ ER + L + + G+ + HS G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGI-KHLHSAG 146
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYG 127
+ HRDLKP N + V D LK DFGL+ + + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIV---VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 128 PEADVWSAGVIL------YILLSG-----------------VPPFWAETEIGIFRQILEG 164
D+WS G I+ IL G P F + + + R +E
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVEN 262
Query: 165 KIDFESEPWPNI----------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + +P + + A+DL+ KML +P +R++ + L HP+I
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 47/239 (19%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V T E+ V++VMEL + ++++ ER + L + + G+ + HS G
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGI-KHLHSAG 139
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYG 127
+ HRDLKP N + V D LK DFGL+ + + V + YY APEV L Y
Sbjct: 140 IIHRDLKPSNIV---VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 196
Query: 128 PEADVWSAGVIL------YILLSG-----------------VPPFWAETEIGIFRQILEG 164
D+WS G I+ IL G P F + + + R +E
Sbjct: 197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVEN 255
Query: 165 KIDFESEPWPNI----------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + +P + + A+DL+ KML +P +R++ + L HP+I
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 110/213 (51%), Gaps = 18/213 (8%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H ++V++ Y + I++E C GG + D I+ + +E + + + ++ +
Sbjct: 66 DHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNF 124
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVL 122
HS + HRDLK N L ++++ D ++ DFG+S K + +G+PY++APEV+
Sbjct: 125 LHSKRIIHRDLKAGNVL-MTLEGD--IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVV 181
Query: 123 R------KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE-GKIDFESEPWPN 175
Y +AD+WS G+ L + PP E+ R +L+ K D + P+
Sbjct: 182 MCETMKDTPYDYKADIWSLGITLIEMAQIEPP---HHELNPMRVLLKIAKSDPPTLLTPS 238
Query: 176 -ISESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
S +D ++ LD+NP+ R +A ++L HP++
Sbjct: 239 KWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 101/232 (43%), Gaps = 47/232 (20%)
Query: 16 TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLK 75
T E+ V++VMEL + ++++ ER + L + + G+ + HS G+ HRDLK
Sbjct: 97 TLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLK 153
Query: 76 PENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWS 134
P N + V D LK DFGL+ + + V + YY APEV L Y D+WS
Sbjct: 154 PSNIV---VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 135 AGVIL------YILLSG-----------------VPPFWAETEIGIFRQILEGKIDFESE 171
G I+ IL G P F + + + R +E + +
Sbjct: 211 VGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVENRPKYAGL 269
Query: 172 PWPNI----------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+P + + A+DL+ KML +P +R++ + L HP+I
Sbjct: 270 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V ++ + V+I MEL EGG L + ++G E A + + +E HS +
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRI 187
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVV------GSPYYVAPE-VL 122
H D+K +N L S AAL DFG +V +PD + D++ G+ ++APE VL
Sbjct: 188 LHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL 245
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
+ + DVWS+ ++ +L+G P W + FR L KI E P I S
Sbjct: 246 GRSCDAKVDVWSSCCMMLHMLNGCHP-WTQ----FFRGPLCLKIASEPPPVREIPPSCAP 300
Query: 183 L----IRKMLDQNPKRRLTAHEV 201
L I++ L + P R++A E+
Sbjct: 301 LTAQAIQEGLRKEPIHRVSAAEL 323
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 110/213 (51%), Gaps = 18/213 (8%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H ++V++ Y + I++E C GG + D I+ + +E + + + ++ +
Sbjct: 74 DHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNF 132
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVL 122
HS + HRDLK N L ++++ D ++ DFG+S K + +G+PY++APEV+
Sbjct: 133 LHSKRIIHRDLKAGNVL-MTLEGD--IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVV 189
Query: 123 R------KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE-GKIDFESEPWPN 175
Y +AD+WS G+ L + PP E+ R +L+ K D + P+
Sbjct: 190 MCETMKDTPYDYKADIWSLGITLIEMAQIEPP---HHELNPMRVLLKIAKSDPPTLLTPS 246
Query: 176 -ISESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
S +D ++ LD+NP+ R +A ++L HP++
Sbjct: 247 KWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 102/239 (42%), Gaps = 47/239 (19%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V T E+ V++VMEL + ++++ ER + L + + G+ HS G
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HSAG 184
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYG 127
+ HRDLKP N + V D LK DFGL+ + + V + YY APEV L Y
Sbjct: 185 IIHRDLKPSNIV---VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 241
Query: 128 PEADVWSAGVIL------YILLSG-----------------VPPFWAETEIGIFRQILEG 164
D+WS G I+ IL G P F + + + R +E
Sbjct: 242 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVEN 300
Query: 165 KIDFESEPWPNI----------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + +P + + A+DL+ KML +P +R++ + L HP+I
Sbjct: 301 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 47/239 (19%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V T E+ V++VMEL + ++++ ER + L + + G+ + HS G
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAG 147
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYG 127
+ HRDLKP N + V D LK DFGL+ + + V + YY APEV L Y
Sbjct: 148 IIHRDLKPSNIV---VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 204
Query: 128 PEADVWSAGVIL------YILLSG-----------------VPPFWAETEIGIFRQILEG 164
D+WS G I+ IL G P F + + + R +E
Sbjct: 205 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVEN 263
Query: 165 KIDFESEPWPNI----------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + +P + + A+DL+ KML +P +R++ + L HP+I
Sbjct: 264 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 47/239 (19%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V T E+ V++VMEL + ++++ ER + L + + G+ + HS G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAG 146
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYG 127
+ HRDLKP N + V D LK DFGL+ + + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIV---VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 128 PEADVWSAGVIL------YILLSG-----------------VPPFWAETEIGIFRQILEG 164
D+WS G I+ IL G P F + + + R +E
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVEN 262
Query: 165 KIDFESEPWPNI----------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + +P + + A+DL+ KML +P +R++ + L HP+I
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 47/239 (19%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V T E+ V++VMEL + ++++ ER + L + + G+ + HS G
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAG 147
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYG 127
+ HRDLKP N + V D LK DFGL+ + + V + YY APEV L Y
Sbjct: 148 IIHRDLKPSNIV---VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 204
Query: 128 PEADVWSAGVIL------YILLSG-----------------VPPFWAETEIGIFRQILEG 164
D+WS G I+ IL G P F + + + R +E
Sbjct: 205 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVEN 263
Query: 165 KIDFESEPWPNI----------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + +P + + A+DL+ KML +P +R++ + L HP+I
Sbjct: 264 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKL-MKTIVGVV 61
H ++V + + + I ME +GG L + K G E+ K+ + I G+
Sbjct: 62 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 121
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
+ HRD+KP N L V+ +K DFG+S DE+ ++ VG+ Y++PE
Sbjct: 122 YLREKHKIMHRDVKPSNIL---VNSRGEIKLCDFGVSGQLI-DEMANEFVGTRSYMSPER 177
Query: 122 LR-KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESA 180
L+ HY ++D+WS G+ L + G P + IF ++L+ ++ EP P + +
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGRYP---RPPMAIF-ELLDYIVN---EPPPKLPSAV 230
Query: 181 -----KDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+D + K L +NP R +++ H +I
Sbjct: 231 FSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 262
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 47/239 (19%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V T E+ V++VMEL + ++++ ER + L + + G+ + HS G
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAG 145
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYG 127
+ HRDLKP N + V D LK DFGL+ + + V + YY APEV L Y
Sbjct: 146 IIHRDLKPSNIV---VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 202
Query: 128 PEADVWSAGVIL------YILLSG-----------------VPPFWAETEIGIFRQILEG 164
D+WS G I+ IL G P F + + + R +E
Sbjct: 203 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVEN 261
Query: 165 KIDFESEPWPNI----------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + +P + + A+DL+ KML +P +R++ + L HP+I
Sbjct: 262 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 320
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 47/239 (19%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V T E+ V++VMEL + ++++ ER + L + + G+ + HS G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAG 146
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYG 127
+ HRDLKP N + V D LK DFGL+ + + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIV---VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 128 PEADVWSAGVIL------YILLSG-----------------VPPFWAETEIGIFRQILEG 164
D+WS G I+ IL G P F + + + R +E
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVEN 262
Query: 165 KIDFESEPWPNI----------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + +P + + A+DL+ KML +P +R++ + L HP+I
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 47/239 (19%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V T E+ V++VMEL + ++++ ER + L + + G+ + HS G
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAG 139
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYG 127
+ HRDLKP N + V D LK DFGL+ + + V + YY APEV L Y
Sbjct: 140 IIHRDLKPSNIV---VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 196
Query: 128 PEADVWSAGVIL------YILLSG-----------------VPPFWAETEIGIFRQILEG 164
D+WS G I+ IL G P F + + + R +E
Sbjct: 197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVEN 255
Query: 165 KIDFESEPWPNI----------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + +P + + A+DL+ KML +P +R++ + L HP+I
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 47/239 (19%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V T E+ V++VMEL + ++++ ER + L + + G+ + HS G
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAG 140
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYG 127
+ HRDLKP N + V D LK DFGL+ + + V + YY APEV L Y
Sbjct: 141 IIHRDLKPSNIV---VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 197
Query: 128 PEADVWSAGVIL------YILLSG-----------------VPPFWAETEIGIFRQILEG 164
D+WS G I+ IL G P F + + + R +E
Sbjct: 198 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVEN 256
Query: 165 KIDFESEPWPNI----------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + +P + + A+DL+ KML +P +R++ + L HP+I
Sbjct: 257 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 47/239 (19%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V T E+ V++VMEL + ++++ ER + L + + G+ + HS G
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAG 184
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYG 127
+ HRDLKP N + V D LK DFGL+ + + V + YY APEV L Y
Sbjct: 185 IIHRDLKPSNIV---VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 241
Query: 128 PEADVWSAGVIL------YILLSG-----------------VPPFWAETEIGIFRQILEG 164
D+WS G I+ IL G P F + + + R +E
Sbjct: 242 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVEN 300
Query: 165 KIDFESEPWPNI----------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + +P + + A+DL+ KML +P +R++ + L HP+I
Sbjct: 301 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 45/211 (21%)
Query: 54 MKTIVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVG 112
M ++ ++ CHS G+ HRD+KP N + +D + L+ D+GL+ FY P + ++ V
Sbjct: 138 MYELLKALDYCHSKGIMHRDVKPHNVM---IDHQQKKLRLIDWGLAEFYHPAQEYNVRVA 194
Query: 113 SPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETE-----------IG--- 156
S Y+ PE+L + Y D+WS G +L ++ PF+ + +G
Sbjct: 195 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEE 254
Query: 157 IFRQILEGKIDFE-----------SEPWPN---------ISESAKDLIRKMLDQNPKRRL 196
++ + + ID + + W N +S A DL+ K+L + ++RL
Sbjct: 255 LYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRL 314
Query: 197 TAHEVLCHPW---IVDDKVAPDKPLDSAVLS 224
TA E + HP+ +V ++ P D+AVLS
Sbjct: 315 TAKEAMEHPYFYPVVKEQSQPSA--DNAVLS 343
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 47/239 (19%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG 68
+V T E+ V++VMEL + ++++ ER + L + + G+ + HS G
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAG 140
Query: 69 VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYG 127
+ HRDLKP N + V D LK DFGL+ + + V + YY APEV L Y
Sbjct: 141 IIHRDLKPSNIV---VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 197
Query: 128 PEADVWSAGVIL------YILLSG-----------------VPPFWAETEIGIFRQILEG 164
D+WS G I+ IL G P F + + + R +E
Sbjct: 198 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVEN 256
Query: 165 KIDFESEPWPNI----------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + +P + + A+DL+ KML +P +R++ + L HP+I
Sbjct: 257 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKL-MKTIVGVV 61
H ++V + + + I ME +GG L + K G E+ K+ + I G+
Sbjct: 78 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 137
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
+ HRD+KP N L V+ +K DFG+S D + + VG+ Y++PE
Sbjct: 138 YLREKHKIMHRDVKPSNIL---VNSRGEIKLCDFGVS-GQLIDSMANSFVGTRSYMSPER 193
Query: 122 LR-KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESA 180
L+ HY ++D+WS G+ L + G P + + ++L+ ++ EP P +
Sbjct: 194 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVN---EPPPKLPSGV 250
Query: 181 -----KDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+D + K L +NP R +++ H +I
Sbjct: 251 FSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 282
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 15/158 (9%)
Query: 7 HQHVVRIHDTYEDKSCVH--IVMELCEGGELFDRIVKKGN---YSEREAAKLMKTIVGVV 61
H+++V++ E+ + H ++ME C G L+ + + N E E +++ +VG +
Sbjct: 66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 62 ECCHSLGVFHRDLKPENFL-FLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE 120
G+ HR++KP N + + D + K TDFG + + DE F + G+ Y+ P+
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPD 185
Query: 121 -----VLRK----HYGPEADVWSAGVILYILLSGVPPF 149
VLRK YG D+WS GV Y +G PF
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 89/219 (40%), Gaps = 72/219 (32%)
Query: 57 IVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV----------------- 99
++ V++ HS G+ HRD+KP N L ++ + +K DFGLS
Sbjct: 118 LIKVIKYLHSGGLLHRDMKPSNIL---LNAECHVKVADFGLSRSFVNIRRVTNNIPLSIN 174
Query: 100 -----FYKPDEVFSDVVGSPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAE 152
F + +D V + +Y APE+L Y D+WS G IL +L G P F
Sbjct: 175 ENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234
Query: 153 TEIGIFRQILEGKIDFESE----------------------------------PWPNI-- 176
+ + +I+ G IDF S W N+
Sbjct: 235 STMNQLERII-GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLL 293
Query: 177 --------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+E A DL+ K+L NP +R++A++ L HP++
Sbjct: 294 KINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFV 332
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 45/224 (20%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
V+IVMEL + ++++ ER + L + + G+ + HS G+ HRDLKP N +
Sbjct: 104 VYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIV-- 158
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVILYI 141
V D LK DFGL+ + + V + YY APEV L Y D+WS G I+
Sbjct: 159 -VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 142 LLSGVPPFWAETEIGIFRQILEG----------------KIDFESEP----------WPN 175
++ G F I + +++E + E+ P +P+
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 277
Query: 176 I------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + A+DL+ KML + +R++ E L HP+I
Sbjct: 278 VLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 248 NEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTID 307
EE+ ++E F + D D +GTI ELK ++ +G + + EIK ++ D + +G ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 308 YGEFLAA-TLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDM 364
+G+FL T +++ + +E +L AF FD D +G I+ L+ KE G +++ L +M
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 365 IKEIDQD 371
I E D+D
Sbjct: 121 IDEADRD 127
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
++E+ +EEI LK FK+ D D +G I+F LK K +G L + E+++++D AD D
Sbjct: 72 MSEKDTKEEI--LK-AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 128
Query: 303 SGTIDYGEFL 312
G + EFL
Sbjct: 129 DGEVSEQEFL 138
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 15/158 (9%)
Query: 7 HQHVVRIHDTYEDKSCVH--IVMELCEGGELFDRIVKKGN---YSEREAAKLMKTIVGVV 61
H+++V++ E+ + H ++ME C G L+ + + N E E +++ +VG +
Sbjct: 66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 62 ECCHSLGVFHRDLKPENFL-FLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE 120
G+ HR++KP N + + D + K TDFG + + DE F + G+ Y+ P+
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPD 185
Query: 121 -----VLRK----HYGPEADVWSAGVILYILLSGVPPF 149
VLRK YG D+WS GV Y +G PF
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 55/250 (22%)
Query: 6 EHQHVVRIH-----DTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+H++++ I D++E+ + V+I+ EL + R++ S+ + +
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSD----------- 109
V+ H V HRDLKP N L ++ + LK DFGL+ DE +D
Sbjct: 125 VKVLHGSNVIHRDLKPSNLL---INSNCDLKVCDFGLARII--DESAADNSEPTGQQSGM 179
Query: 110 --VVGSPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPF----WAETEIGIF--- 158
V + +Y APEV+ Y DVWS G IL L P F + + IF
Sbjct: 180 VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239
Query: 159 -----------------RQILEGKIDFESEP----WPNISESAKDLIRKMLDQNPKRRLT 197
R+ ++ + + P +P ++ DL+++ML +P +R+T
Sbjct: 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT 299
Query: 198 AHEVLCHPWI 207
A E L HP++
Sbjct: 300 AKEALEHPYL 309
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 44/237 (18%)
Query: 7 HQHVVRIHD------TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
H++V+ + D T +D + ++VM G +++K E L+ ++
Sbjct: 83 HENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKG 140
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE 120
+ H+ G+ HRDLKP N L+V+ED LK DFGL+ + D V + +Y APE
Sbjct: 141 LRYIHAAGIIHRDLKPGN---LAVNEDCELKILDFGLA--RQADSEMXGXVVTRWYRAPE 195
Query: 121 VLRK--HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE--------------- 163
V+ Y D+WS G I+ +++G F + ++I++
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 255
Query: 164 -------------GKIDFESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
K DF S N S A +L+ KML + ++R+TA E L HP+
Sbjct: 256 DEAKNYMKGLPELEKKDFAS-ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 32/218 (14%)
Query: 23 VHIVMELCEGGEL--FDR--IVKKGNYSEREAAKLMKTIVGVVECCHSL-----GVFHRD 73
V+I+ E E + FD V NY+ +++K I+ V S + HRD
Sbjct: 118 VYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRD 177
Query: 74 LKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRK---HYGPEA 130
+KP N L +D++ +K +DFG S Y D+ G+ ++ PE + G +
Sbjct: 178 VKPSNIL---MDKNGRVKLSDFGESE-YMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKV 233
Query: 131 DVWSAGVILYILLSGVPPFWAETE-IGIFRQILEGKIDFESE------PWPN-------- 175
D+WS G+ LY++ V PF + + +F I I++ + P N
Sbjct: 234 DIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNN 293
Query: 176 -ISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKV 212
+S D ++ L +NP R+T+ + L H W+ D +
Sbjct: 294 FLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNI 331
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 55/250 (22%)
Query: 6 EHQHVVRIH-----DTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+H++++ I D++E+ + V+I+ EL + R++ S+ + +
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSD----------- 109
V+ H V HRDLKP N L ++ + LK DFGL+ DE +D
Sbjct: 125 VKVLHGSNVIHRDLKPSNLL---INSNCDLKVCDFGLARII--DESAADNSEPTGQQSGM 179
Query: 110 --VVGSPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPF----WAETEIGIF--- 158
V + +Y APEV+ Y DVWS G IL L P F + + IF
Sbjct: 180 TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239
Query: 159 -----------------RQILEGKIDFESEP----WPNISESAKDLIRKMLDQNPKRRLT 197
R+ ++ + + P +P ++ DL+++ML +P +R+T
Sbjct: 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT 299
Query: 198 AHEVLCHPWI 207
A E L HP++
Sbjct: 300 AKEALEHPYL 309
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 55/250 (22%)
Query: 6 EHQHVVRIH-----DTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV 60
+H++++ I D++E+ + V+I+ EL + R++ S+ + +
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSD----------- 109
V+ H V HRDLKP N L ++ + LK DFGL+ DE +D
Sbjct: 125 VKVLHGSNVIHRDLKPSNLL---INSNCDLKVCDFGLARII--DESAADNSEPTGQQSGM 179
Query: 110 --VVGSPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPF----WAETEIGIF--- 158
V + +Y APEV+ Y DVWS G IL L P F + + IF
Sbjct: 180 TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239
Query: 159 -----------------RQILEGKIDFESEP----WPNISESAKDLIRKMLDQNPKRRLT 197
R+ ++ + + P +P ++ DL+++ML +P +R+T
Sbjct: 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT 299
Query: 198 AHEVLCHPWI 207
A E L HP++
Sbjct: 300 AKEALEHPYL 309
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 40/236 (16%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKL-MKTIVGVVECC 64
+H ++V +HD + + +V E + +L + GN KL + ++ + C
Sbjct: 58 KHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYC 116
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK-PDEVFSDVVGSPYYVAPEVL- 122
H V HRDLKP+N L ++E LK DFGL+ P + + + V + +Y P++L
Sbjct: 117 HRQKVLHRDLKPQNLL---INERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILL 173
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAET---EIGIFRQILEGKIDFESEPWPNISE 178
Y + D+W G I Y + +G P F T ++ +IL + E WP I
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTE---ETWPGILS 230
Query: 179 S--------------------------AKDLIRKMLDQNPKRRLTAHEVLCHPWIV 208
+ DL+ K+L + R++A + + HP+ +
Sbjct: 231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFL 286
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 14/215 (6%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKL-MKTIVGVV 61
H ++V + + + I ME +GG L + K G E+ K+ + I G+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
+ HRD+KP N L V+ +K DFG+S D + + VG+ Y++PE
Sbjct: 119 YLREKHKIMHRDVKPSNIL---VNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPER 174
Query: 122 LR-KHYGPEADVWSAGVILYILLSG---VPPFWAETEIGIFRQILEGKIDFESEPWPNIS 177
L+ HY ++D+WS G+ L + G +PP A+ + I E +EP P +
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLP 234
Query: 178 ESA-----KDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+D + K L +NP R +++ H +I
Sbjct: 235 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 269
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 45/224 (20%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
V+IVMEL + ++++ ER + L + + G+ + HS G+ HRDLKP N +
Sbjct: 104 VYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIV-- 158
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVILYI 141
V D LK DFGL+ + + V + YY APEV L Y D+WS G I+
Sbjct: 159 -VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 142 LLSGVPPFWAETEIGIFRQILEG----------------KIDFESEP----------WPN 175
++ G F I + +++E + E+ P +P+
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 277
Query: 176 I------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + A+DL+ KML + +R++ E L HP+I
Sbjct: 278 VLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 45/224 (20%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
V+IVMEL + ++++ ER + L + + G+ + HS G+ HRDLKP N +
Sbjct: 104 VYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIV-- 158
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVILYI 141
V D LK DFGL+ + + V + YY APEV L Y D+WS G I+
Sbjct: 159 -VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 142 LLSGVPPFWAETEIGIFRQILEG----------------KIDFESEP----------WPN 175
++ G F I + +++E + E+ P +P+
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 277
Query: 176 I------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + A+DL+ KML + +R++ E L HP+I
Sbjct: 278 VLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 16/195 (8%)
Query: 25 IVMELCEGGELFDRIVK-KGNYSERE-AAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
+VME C G + D I KGN + E A + + I+ + H V HRD+K +N L
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT 163
Query: 83 SVDEDAALKATDFGLSV-FYKPDEVFSDVVGSPYYVAPEVLRKHYGPEA------DVWSA 135
E+A +K DFG+S + + +G+PY++APEV+ P+A D+WS
Sbjct: 164 ---ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSL 220
Query: 136 GVILYILLSGVPPFWAETEI-GIFRQILEGKIDFESEPWPNISESAKDLIRKMLDQNPKR 194
G+ + G PP + +F +S+ W S+ + I L +N +
Sbjct: 221 GITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQ 277
Query: 195 RLTAHEVLCHPWIVD 209
R +++ HP+I D
Sbjct: 278 RPATEQLMKHPFIRD 292
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V ++ + V+I MEL EGG L + ++G E A + + +E HS +
Sbjct: 147 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRI 206
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVV------GSPYYVAPE-VL 122
H D+K +N L S AAL DFG +V +PD + ++ G+ ++APE VL
Sbjct: 207 LHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL 264
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
+ + DVWS+ ++ +L+G P W + FR L KI E P I S
Sbjct: 265 GRSCDAKVDVWSSCCMMLHMLNGCHP-WTQ----FFRGPLCLKIASEPPPVREIPPSCAP 319
Query: 183 L----IRKMLDQNPKRRLTAHEV 201
L I++ L + P R++A E+
Sbjct: 320 LTAQAIQEGLRKEPIHRVSAAEL 342
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 45/224 (20%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
V+IVMEL + ++++ ER + L + + G+ + HS G+ HRDLKP N +
Sbjct: 105 VYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIV-- 159
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVILYI 141
V D LK DFGL+ + + V + YY APEV L Y D+WS G I+
Sbjct: 160 -VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 218
Query: 142 LLSGVPPFWAETEIGIFRQILEG----------------KIDFESEP----------WPN 175
++ G F I + +++E + E+ P +P+
Sbjct: 219 MIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 278
Query: 176 I------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + A+DL+ KML + +R++ E L HP+I
Sbjct: 279 VLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 14/211 (6%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H + ++ Y + +VME C G V K E E A + + + H
Sbjct: 112 RHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL--- 122
S + HRD+K N L + E +K DFG + P F VG+PY++APEV+
Sbjct: 172 SHNMIHRDVKAGNIL---LSEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAM 225
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKID-FESEPWPNISESA 180
Y + DVWS G+ L PP + + I + + +S W SE
Sbjct: 226 DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYF 282
Query: 181 KDLIRKMLDQNPKRRLTAHEVLCHPWIVDDK 211
++ + L + P+ R T+ +L H +++ ++
Sbjct: 283 RNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 313
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 14/211 (6%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H + ++ Y + +VME C G V K E E A + + + H
Sbjct: 73 RHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL--- 122
S + HRD+K N L + E +K DFG + P F VG+PY++APEV+
Sbjct: 133 SHNMIHRDVKAGNIL---LSEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAM 186
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKID-FESEPWPNISESA 180
Y + DVWS G+ L PP + + I + + +S W SE
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYF 243
Query: 181 KDLIRKMLDQNPKRRLTAHEVLCHPWIVDDK 211
++ + L + P+ R T+ +L H +++ ++
Sbjct: 244 RNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 15/152 (9%)
Query: 220 SAVLSRLKHFSAMNKLKKMALRVIAERLNE-EEIGGLKELFKMIDTDNSGTITFDELKDG 278
+ L +K F + KL + A+ + +L EE L ++F+ +D + G + EL +G
Sbjct: 6 TGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEG 65
Query: 279 LKRV-----------GSQLMESEIKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENL 327
+++ S +E+E+ ++ + D D +G I+Y EF+ + L E L
Sbjct: 66 YRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERL 125
Query: 328 LSAFSFFDKDASGYITIDELQHACKEFGISEL 359
L+AF FD D SG IT +EL FG++E+
Sbjct: 126 LAAFQQFDSDGSGKITNEELGRL---FGVTEV 154
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL-- 122
HSLG+ HRD+KP+N L S +D LK DFG + P E + S +Y APE++
Sbjct: 158 HSLGICHRDIKPQNLLVNS--KDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLG 215
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE-----------------GK 165
Y P D+WS G + L+ G P F ET I +I++ +
Sbjct: 216 ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTE 275
Query: 166 IDF---ESEPWPNI-----SESAKDLIRKMLDQNPKRRLTAHEVLCHPW 206
+ F +++ W I A DL+ ++L P R+ +E + HP+
Sbjct: 276 VRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPF 324
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 41/209 (19%)
Query: 54 MKTIVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVG 112
M I+ ++ CHS+G+ HRD+KP N + +D E L+ D+GL+ FY P + ++ V
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM---IDHEHRKLRLIDWGLAEFYHPGQEYNVRVA 193
Query: 113 SPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFW----AETEIGIFRQILEG-- 164
S Y+ PE+L + Y D+WS G +L ++ PF+ ++ ++L
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 165 ------KIDFESEPWPN----------------------ISESAKDLIRKMLDQNPKRRL 196
K + E +P N +S A D + K+L + + RL
Sbjct: 254 LYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRL 313
Query: 197 TAHEVLCHPWIVDDKVAPDKPL-DSAVLS 224
TA E + HP+ +P D+AVLS
Sbjct: 314 TAREAMEHPYFYPVVKEQSQPCADNAVLS 342
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 80/187 (42%), Gaps = 27/187 (14%)
Query: 53 LMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG 112
LM+ + ++ H+ + HRDLKPEN L V +K DFGL+ Y + VV
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENIL---VTSGGTVKLADFGLARIYSYQMALAPVVV 173
Query: 113 SPYYVAPEV-LRKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE 171
+ +Y APEV L+ Y D+WS G I + P F +E +I + +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 233
Query: 172 PWPN-----------------------ISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIV 208
WP + ES L+ +ML NP +R++A L H ++
Sbjct: 234 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 293
Query: 209 DDKVAPD 215
D+ P+
Sbjct: 294 KDEGNPE 300
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 45/224 (20%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
V+IVMEL + ++++ ER + L + + G+ + HS G+ HRDLKP N +
Sbjct: 104 VYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIV-- 158
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVILYI 141
V D LK DFGL+ + + V + YY APEV L Y D+WS G I+
Sbjct: 159 -VKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 142 LLSGVPPFWAETEIGIFRQILEG----------------KIDFESEP----------WPN 175
++ G F I + +++E + E+ P +P+
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 277
Query: 176 I------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + A+DL+ KML + +R++ E L HP+I
Sbjct: 278 VLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 80/187 (42%), Gaps = 27/187 (14%)
Query: 53 LMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG 112
LM+ + ++ H+ + HRDLKPEN L V +K DFGL+ Y + VV
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENIL---VTSGGTVKLADFGLARIYSYQMALTPVVV 181
Query: 113 SPYYVAPEV-LRKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE 171
+ +Y APEV L+ Y D+WS G I + P F +E +I + +
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 241
Query: 172 PWPN-----------------------ISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIV 208
WP + ES L+ +ML NP +R++A L H ++
Sbjct: 242 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 301
Query: 209 DDKVAPD 215
D+ P+
Sbjct: 302 KDEGNPE 308
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 45/224 (20%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
V+IVMEL + ++++ ER + L + + G+ + HS G+ HRDLKP N +
Sbjct: 106 VYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIV-- 160
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVILYI 141
V D LK DFGL+ + V + YY APEV L Y D+WS G I+
Sbjct: 161 -VKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 219
Query: 142 LLSGVPPFWAETEIGIFRQILEG----------------KIDFESEP----------WPN 175
++ G F I + +++E + E+ P +P+
Sbjct: 220 MIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 279
Query: 176 I------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
+ + A+DL+ KML + +R++ E L HP+I
Sbjct: 280 VLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 323
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 46/235 (19%)
Query: 20 KSCVHIVMELCE---GGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKP 76
K+ +++V + CE G L + +VK ++ E ++M+ ++ + H + HRD+K
Sbjct: 97 KASIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKA 153
Query: 77 ENFLFLSVDEDAALKATDFGLSVFY------KPDEVFSDVVGSPYYVAPEVL--RKHYGP 128
N L + D LK DFGL+ + +P+ + VV + +Y PE+L + YGP
Sbjct: 154 ANVL---ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGP 209
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE---------- 178
D+W AG I+ + + P TE I + E WPN+
Sbjct: 210 PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELV 269
Query: 179 ------------------SAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
A DLI K+L +P +R+ + + L H + D + D
Sbjct: 270 KGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSD 324
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 26/190 (13%)
Query: 22 CVHIVMELCEGGELFDRIVKKGNYSERE--AAKLMKTIVGVVECCHSLGVFHRDLKPENF 79
C+ I ME C+ G L I K+ + A +L + I V+ HS + HRDLKP N
Sbjct: 108 CLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNI 167
Query: 80 LFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE-VLRKHYGPEADVWSAGVI 138
+ + +K DFGL K D + G+ Y++PE + + YG E D+++ G+I
Sbjct: 168 FLVDTKQ---VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLI 224
Query: 139 LYILLS------GVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKMLDQNP 192
L LL F+ + GI I + K K L++K+L + P
Sbjct: 225 LAELLHVCDTAFETSKFFTDLRDGIISDIFDKK--------------EKTLLQKLLSKKP 270
Query: 193 KRRLTAHEVL 202
+ R E+L
Sbjct: 271 EDRPNTSEIL 280
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 79/187 (42%), Gaps = 27/187 (14%)
Query: 53 LMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG 112
LM+ + ++ H+ + HRDLKPEN L V +K DFGL+ Y VV
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENIL---VTSGGTVKLADFGLARIYSYQMALDPVVV 173
Query: 113 SPYYVAPEV-LRKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE 171
+ +Y APEV L+ Y D+WS G I + P F +E +I + +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 233
Query: 172 PWPN-----------------------ISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIV 208
WP + ES L+ +ML NP +R++A L H ++
Sbjct: 234 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 293
Query: 209 DDKVAPD 215
D+ P+
Sbjct: 294 KDEGNPE 300
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 40/191 (20%)
Query: 54 MKTIVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVG 112
M I+ ++ CHS+G+ HRD+KP N L +D E L+ D+GL+ FY P + ++ V
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVL---IDHEHRKLRLIDWGLAEFYHPGQEYNVRVA 193
Query: 113 SPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFW----AETEIGIFRQILEG-- 164
S Y+ PE+L + Y D+WS G +L ++ PF+ ++ ++L
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 165 ------KIDFESEPWPN----------------------ISESAKDLIRKMLDQNPKRRL 196
K + E +P N +S A D + K+L + + RL
Sbjct: 254 LYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRL 313
Query: 197 TAHEVLCHPWI 207
TA E + HP+
Sbjct: 314 TAREAMEHPYF 324
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 46/235 (19%)
Query: 20 KSCVHIVMELCE---GGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKP 76
K +++V + CE G L + +VK ++ E ++M+ ++ + H + HRD+K
Sbjct: 97 KGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKA 153
Query: 77 ENFLFLSVDEDAALKATDFGLSVFY------KPDEVFSDVVGSPYYVAPEVL--RKHYGP 128
N L + D LK DFGL+ + +P+ + VV + +Y PE+L + YGP
Sbjct: 154 ANVL---ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGP 209
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE---------- 178
D+W AG I+ + + P TE I + E WPN+
Sbjct: 210 PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELV 269
Query: 179 ------------------SAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
A DLI K+L +P +R+ + + L H + D + D
Sbjct: 270 KGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSD 324
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 54/260 (20%)
Query: 3 HLSEHQHVVRIHDTYEDKSC--------VHIVMELCE---GGELFDRIVKKGNYSEREAA 51
L +H++VV + + K+ +++V + CE G L + +VK ++ E
Sbjct: 72 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIK 128
Query: 52 KLMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFY------KPDE 105
++M+ ++ + H + HRD+K N L + D LK DFGL+ + +P+
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVL---ITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 106 VFSDVVGSPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE 163
+ VV + +Y PE+L + YGP D+W AG I+ + + P TE I +
Sbjct: 186 YXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 244
Query: 164 GKIDFESEPWPNISE----------------------------SAKDLIRKMLDQNPKRR 195
E WPN+ A DLI K+L +P +R
Sbjct: 245 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQR 304
Query: 196 LTAHEVLCHPWIVDDKVAPD 215
+ + + L H + D + D
Sbjct: 305 IDSDDALNHDFFWSDPMPSD 324
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 46/235 (19%)
Query: 20 KSCVHIVMELCE---GGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKP 76
K +++V + CE G L + +VK ++ E ++M+ ++ + H + HRD+K
Sbjct: 96 KGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKA 152
Query: 77 ENFLFLSVDEDAALKATDFGLSVFY------KPDEVFSDVVGSPYYVAPEVL--RKHYGP 128
N L + D LK DFGL+ + +P+ + VV + +Y PE+L + YGP
Sbjct: 153 ANVL---ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGP 208
Query: 129 EADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE---------- 178
D+W AG I+ + + P TE I + E WPN+
Sbjct: 209 PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELV 268
Query: 179 ------------------SAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPD 215
A DLI K+L +P +R+ + + L H + D + D
Sbjct: 269 KGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSD 323
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 40/191 (20%)
Query: 54 MKTIVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVG 112
M ++ ++ CHS G+ HRD+KP N + +D + L+ D+GL+ FY P + ++ V
Sbjct: 143 MYELLKALDYCHSKGIMHRDVKPHNVM---IDHQQKKLRLIDWGLAEFYHPAQEYNVRVA 199
Query: 113 SPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETE-----------IG--- 156
S Y+ PE+L + Y D+WS G +L ++ PF+ + +G
Sbjct: 200 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEE 259
Query: 157 IFRQILEGKIDFE-----------SEPWPN---------ISESAKDLIRKMLDQNPKRRL 196
++ + + ID + + W N +S A DL+ K+L + ++RL
Sbjct: 260 LYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRL 319
Query: 197 TAHEVLCHPWI 207
TA E + HP+
Sbjct: 320 TAKEAMEHPYF 330
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 79/187 (42%), Gaps = 27/187 (14%)
Query: 53 LMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG 112
LM+ + ++ H+ + HRDLKPEN L V +K DFGL+ Y VV
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENIL---VTSGGTVKLADFGLARIYSYQMALFPVVV 173
Query: 113 SPYYVAPEV-LRKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESE 171
+ +Y APEV L+ Y D+WS G I + P F +E +I + +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 233
Query: 172 PWPN-----------------------ISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIV 208
WP + ES L+ +ML NP +R++A L H ++
Sbjct: 234 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 293
Query: 209 DDKVAPD 215
D+ P+
Sbjct: 294 KDEGNPE 300
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 44/193 (22%)
Query: 54 MKTIVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVG 112
M I+ ++ CHS+G+ HRD+KP N + +D E L+ D+GL+ FY P + ++ V
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM---IDHEHRKLRLIDWGLAEFYHPGQEYNVRVA 193
Query: 113 SPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE------- 163
S Y+ PE+L + Y D+WS G +L ++ PF+ + + Q++
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD--NYDQLVRIAKVLGT 251
Query: 164 -------GKIDFESEPWPN----------------------ISESAKDLIRKMLDQNPKR 194
K + E +P N +S A D + K+L + +
Sbjct: 252 EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQS 311
Query: 195 RLTAHEVLCHPWI 207
RLTA E + HP+
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 44/193 (22%)
Query: 54 MKTIVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVG 112
M I+ ++ CHS+G+ HRD+KP N + +D E L+ D+GL+ FY P + ++ V
Sbjct: 136 MYEILKALDYCHSMGIMHRDVKPHNVM---IDHEHRKLRLIDWGLAEFYHPGQEYNVRVA 192
Query: 113 SPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE------- 163
S Y+ PE+L + Y D+WS G +L ++ PF+ + + Q++
Sbjct: 193 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD--NYDQLVRIAKVLGT 250
Query: 164 -------GKIDFESEPWPN----------------------ISESAKDLIRKMLDQNPKR 194
K + E +P N +S A D + K+L + +
Sbjct: 251 EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQS 310
Query: 195 RLTAHEVLCHPWI 207
RLTA E + HP+
Sbjct: 311 RLTAREAMEHPYF 323
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 44/193 (22%)
Query: 54 MKTIVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVG 112
M I+ ++ CHS+G+ HRD+KP N + +D E L+ D+GL+ FY P + ++ V
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM---IDHEHRKLRLIDWGLAEFYHPGQEYNVRVA 193
Query: 113 SPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE------- 163
S Y+ PE+L + Y D+WS G +L ++ PF+ + + Q++
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD--NYDQLVRIAKVLGT 251
Query: 164 -------GKIDFESEPWPN----------------------ISESAKDLIRKMLDQNPKR 194
K + E +P N +S A D + K+L + +
Sbjct: 252 EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQS 311
Query: 195 RLTAHEVLCHPWI 207
RLTA E + HP+
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 40/191 (20%)
Query: 54 MKTIVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVG 112
M I+ ++ CHS+G+ HRD+KP N + +D E L+ D+GL+ FY P + ++ V
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM---IDHEHRKLRLIDWGLAEFYHPGQEYNVRVA 193
Query: 113 SPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFW----AETEIGIFRQILEG-- 164
S Y+ PE+L + Y D+WS G +L ++ PF+ ++ ++L
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 165 ------KIDFESEPWPN----------------------ISESAKDLIRKMLDQNPKRRL 196
K + E +P N +S A D + K+L + + RL
Sbjct: 254 LYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRL 313
Query: 197 TAHEVLCHPWI 207
TA E + HP+
Sbjct: 314 TAREAMEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 44/193 (22%)
Query: 54 MKTIVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVG 112
M I+ ++ CHS+G+ HRD+KP N + +D E L+ D+GL+ FY P + ++ V
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM---IDHEHRKLRLIDWGLAEFYHPGQEYNVRVA 193
Query: 113 SPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE------- 163
S Y+ PE+L + Y D+WS G +L ++ PF+ + + Q++
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD--NYDQLVRIAKVLGT 251
Query: 164 -------GKIDFESEPWPN----------------------ISESAKDLIRKMLDQNPKR 194
K + E +P N +S A D + K+L + +
Sbjct: 252 EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQS 311
Query: 195 RLTAHEVLCHPWI 207
RLTA E + HP+
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 40/191 (20%)
Query: 54 MKTIVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVG 112
M I+ ++ CHS+G+ HRD+KP N + +D E L+ D+GL+ FY P + ++ V
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM---IDHEHRKLRLIDWGLAEFYHPGQEYNVRVA 193
Query: 113 SPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFW----AETEIGIFRQILEG-- 164
S Y+ PE+L + Y D+WS G +L ++ PF+ ++ ++L
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 165 ------KIDFESEPWPN----------------------ISESAKDLIRKMLDQNPKRRL 196
K + E +P N +S A D + K+L + + RL
Sbjct: 254 LYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRL 313
Query: 197 TAHEVLCHPWI 207
TA E + HP+
Sbjct: 314 TAREAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 44/193 (22%)
Query: 54 MKTIVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVG 112
M I+ ++ CHS+G+ HRD+KP N + +D E L+ D+GL+ FY P + ++ V
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM---IDHEHRKLRLIDWGLAEFYHPGQEYNVRVA 193
Query: 113 SPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE------- 163
S Y+ PE+L + Y D+WS G +L ++ PF+ + + Q++
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD--NYDQLVRIAKVLGT 251
Query: 164 -------GKIDFESEPWPN----------------------ISESAKDLIRKMLDQNPKR 194
K + E +P N +S A D + K+L + +
Sbjct: 252 EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQS 311
Query: 195 RLTAHEVLCHPWI 207
RLTA E + HP+
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 44/193 (22%)
Query: 54 MKTIVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVG 112
M I+ ++ CHS+G+ HRD+KP N + +D E L+ D+GL+ FY P + ++ V
Sbjct: 136 MYEILKALDYCHSMGIMHRDVKPHNVM---IDHEHRKLRLIDWGLAEFYHPGQEYNVRVA 192
Query: 113 SPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE------- 163
S Y+ PE+L + Y D+WS G +L ++ PF+ + + Q++
Sbjct: 193 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD--NYDQLVRIAKVLGT 250
Query: 164 -------GKIDFESEPWPN----------------------ISESAKDLIRKMLDQNPKR 194
K + E +P N +S A D + K+L + +
Sbjct: 251 EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQS 310
Query: 195 RLTAHEVLCHPWI 207
RLTA E + HP+
Sbjct: 311 RLTAREAMEHPYF 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 40/191 (20%)
Query: 54 MKTIVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVG 112
M I+ ++ CHS+G+ HRD+KP N + +D E L+ D+GL+ FY P + ++ V
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM---IDHEHRKLRLIDWGLAEFYHPGQEYNVRVA 193
Query: 113 SPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFW----AETEIGIFRQILEG-- 164
S Y+ PE+L + Y D+WS G +L ++ PF+ ++ ++L
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 165 ------KIDFESEPWPN----------------------ISESAKDLIRKMLDQNPKRRL 196
K + E +P N +S A D + K+L + + RL
Sbjct: 254 LYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRL 313
Query: 197 TAHEVLCHPWI 207
TA E + HP+
Sbjct: 314 TAREAMEHPYF 324
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 7/193 (3%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+ HVV IHD E +++ L G +L + ++G + A +++ I ++ H
Sbjct: 92 QEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAH 151
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEV--FSDVVGSPYYVAPEVLR 123
+ G HRD+KPEN L +S D+ A L DFG++ +++ + VG+ YY APE
Sbjct: 152 AAGATHRDVKPENIL-VSADDFAYL--VDFGIASATTDEKLTQLGNTVGTLYYXAPERFS 208
Query: 124 K-HYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKD 182
+ H AD+++ +LY L+G PP+ + ++ + + I S P I +
Sbjct: 209 ESHATYRADIYALTCVLYECLTGSPPYQGD-QLSVXGAHINQAIPRPSTVRPGIPVAFDA 267
Query: 183 LIRKMLDQNPKRR 195
+I + +NP+ R
Sbjct: 268 VIARGXAKNPEDR 280
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 40/191 (20%)
Query: 54 MKTIVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVG 112
M I+ ++ CHS+G+ HRD+KP N + +D E L+ D+GL+ FY P + ++ V
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM---IDHEHRKLRLIDWGLAEFYHPGQEYNVRVA 193
Query: 113 SPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFW----AETEIGIFRQILEG-- 164
S Y+ PE+L + Y D+WS G +L ++ PF+ ++ ++L
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 165 ------KIDFESEPWPN----------------------ISESAKDLIRKMLDQNPKRRL 196
K + E +P N +S A D + K+L + + RL
Sbjct: 254 LYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRL 313
Query: 197 TAHEVLCHPWI 207
TA E + HP+
Sbjct: 314 TAREAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 44/193 (22%)
Query: 54 MKTIVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVG 112
M I+ ++ CHS+G+ HRD+KP N + +D E L+ D+GL+ FY P + ++ V
Sbjct: 135 MYEILKALDYCHSMGIMHRDVKPHNVM---IDHEHRKLRLIDWGLAEFYHPGQEYNVRVA 191
Query: 113 SPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE------- 163
S Y+ PE+L + Y D+WS G +L ++ PF+ + + Q++
Sbjct: 192 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD--NYDQLVRIAKVLGT 249
Query: 164 -------GKIDFESEPWPN----------------------ISESAKDLIRKMLDQNPKR 194
K + E +P N +S A D + K+L + +
Sbjct: 250 EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQS 309
Query: 195 RLTAHEVLCHPWI 207
RLTA E + HP+
Sbjct: 310 RLTAREAMEHPYF 322
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 40/191 (20%)
Query: 54 MKTIVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVG 112
M I+ ++ CHS+G+ HRD+KP N + +D E L+ D+GL+ FY P + ++ V
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM---IDHEHRKLRLIDWGLAEFYHPGQEYNVRVA 193
Query: 113 SPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFW----AETEIGIFRQILEG-- 164
S Y+ PE+L + Y D+WS G +L ++ PF+ ++ ++L
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 165 ------KIDFESEPWPN----------------------ISESAKDLIRKMLDQNPKRRL 196
K + E +P N +S A D + K+L + + RL
Sbjct: 254 LYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRL 313
Query: 197 TAHEVLCHPWI 207
TA E + HP+
Sbjct: 314 TAREAMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 44/193 (22%)
Query: 54 MKTIVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVG 112
M I+ ++ CHS+G+ HRD+KP N + +D E L+ D+GL+ FY P + ++ V
Sbjct: 142 MYEILKALDYCHSMGIMHRDVKPHNVM---IDHEHRKLRLIDWGLAEFYHPGQEYNVRVA 198
Query: 113 SPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE------- 163
S Y+ PE+L + Y D+WS G +L ++ PF+ + + Q++
Sbjct: 199 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD--NYDQLVRIAKVLGT 256
Query: 164 -------GKIDFESEPWPN----------------------ISESAKDLIRKMLDQNPKR 194
K + E +P N +S A D + K+L + +
Sbjct: 257 EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQS 316
Query: 195 RLTAHEVLCHPWI 207
RLTA E + HP+
Sbjct: 317 RLTAREAMEHPYF 329
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L EE+I K+ F D + +G I EL ++ +G E+E++DL+ A+ +N+G +
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 307 DYGEFLA-ATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDD 363
++ EF + + + EE + AF FD+D G+I+ EL+ G +++ +D+
Sbjct: 64 NFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDE 123
Query: 364 MIKEIDQD 371
MI+E D D
Sbjct: 124 MIREADFD 131
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
++E FK+ D D G I+ EL+ + +G ++ + EI +++ AD D G I+Y EF+
Sbjct: 85 MREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFV 142
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 29/201 (14%)
Query: 23 VHIVMELCEGG--ELFDRIVKKG-NYSEREAAKLMKTIVGVVECCHS-LGVFHRDLKPEN 78
V I MEL + + + +++ KG E K+ +IV +E HS L V HRD+KP N
Sbjct: 81 VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 140
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPDEVFSDV-VGSPYYVAPEVL-----RKHYGPEADV 132
L ++ + +K DFG+S Y D+V D+ G Y+APE + +K Y ++D+
Sbjct: 141 VLINALGQ---VKMCDFGIS-GYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDI 196
Query: 133 WSAGVILYILLSGVPPF--WAETEIGIFRQILEGKIDFESEPWPNI-----SESAKDLIR 185
WS G+ + L P+ W T +Q++E EP P + S D
Sbjct: 197 WSLGITMIELAILRFPYDSWG-TPFQQLKQVVE-------EPSPQLPADKFSAEFVDFTS 248
Query: 186 KMLDQNPKRRLTAHEVLCHPW 206
+ L +N K R T E++ HP+
Sbjct: 249 QCLKKNSKERPTYPELMQHPF 269
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 6/132 (4%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L+EE I K F M D D G I+ EL ++ +G + E+ +++ D D SGTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 307 DYGEFLAATLHLNKLE----REENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
D+ EFL + K + EE L + F FDK+A G+I I+EL + G ++E
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 361 LDDMIKEIDQDD 372
++D++K+ D+++
Sbjct: 134 IEDLMKDSDKNN 145
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 168 FESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLK 227
F+++ +IS + +ML QNP T E+ D + + D + +
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNP----TKEEL--------DAIIEEVDEDGSGTIDFE 76
Query: 228 HFSAMNKLKKMALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLM 287
F M +++M + A+ +EEE L F++ D + G I +EL + L+ G +
Sbjct: 77 EFLVM-MVRQM--KEDAKGKSEEE---LANCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 288 ESEIKDLMDAADIDNSGTIDYGEFL 312
E +I+DLM +D +N G ID+ EFL
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 17 YEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLK 75
Y K + IV + CEG L+ + + + ++ + + ++ H+ + HRDLK
Sbjct: 76 YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 135
Query: 76 PENFLFLSVDEDAALKATDFGLSVF---YKPDEVFSDVVGSPYYVAPEVLRKH----YGP 128
N +FL ED +K DFGL+ + F + GS ++APEV+R Y
Sbjct: 136 SNN-IFL--HEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 129 EADVWSAGVILYILLSGVPPF 149
++DV++ G++LY L++G P+
Sbjct: 193 QSDVYAFGIVLYELMTGQLPY 213
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 6/132 (4%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L+EE I K F M D D G I+ EL ++ +G + E+ +++ D D SGTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 307 DYGEFLAATLHLNKLE----REENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
D+ EFL + K + EE L + F FDK+A G+I I+EL + G ++E
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 130
Query: 361 LDDMIKEIDQDD 372
++D++K+ D+++
Sbjct: 131 IEDLMKDSDKNN 142
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 168 FESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLK 227
F+++ +IS + +ML QNP T E+ D + + D + +
Sbjct: 26 FDADGGGDISTKELGTVMRMLGQNP----TKEEL--------DAIIEEVDEDGSGTIDFE 73
Query: 228 HFSAMNKLKKMALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLM 287
F M +++M + A+ +EEE L F++ D + G I +EL + L+ G +
Sbjct: 74 EFLVM-MVRQM--KEDAKGKSEEE---LANCFRIFDKNADGFIDIEELGEILRATGEHVT 127
Query: 288 ESEIKDLMDAADIDNSGTIDYGEFL 312
E +I+DLM +D +N G ID+ EFL
Sbjct: 128 EEDIEDLMKDSDKNNDGRIDFDEFL 152
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 47/225 (20%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
V+IVMEL + ++++ ER + L + + G+ + HS G+ HRDLKP N +
Sbjct: 98 VYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIV-- 152
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVIL-- 139
V D LK DFGL+ + + V + YY APEV L Y D+WS G I+
Sbjct: 153 -VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGE 211
Query: 140 ----YILLSG-----------------VPPFWAETEIGIFRQILEGKIDFES----EPWP 174
IL G P F + + + R +E + + + +P
Sbjct: 212 MVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RTYVENRPKYAGYSFEKLFP 270
Query: 175 NI------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
++ + A+DL+ KML + +R++ E L HP+I
Sbjct: 271 DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 315
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 47/225 (20%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
V+IVMEL + ++++ ER + L + + G+ + HS G+ HRDLKP N +
Sbjct: 109 VYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIV-- 163
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVIL-- 139
V D LK DFGL+ + + V + YY APEV L Y D+WS G I+
Sbjct: 164 -VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGE 222
Query: 140 ----YILLSG-----------------VPPFWAETEIGIFRQILEGKIDFES----EPWP 174
IL G P F + + + R +E + + + +P
Sbjct: 223 MVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RTYVENRPKYAGYSFEKLFP 281
Query: 175 NI------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
++ + A+DL+ KML + +R++ E L HP+I
Sbjct: 282 DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 326
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 47/225 (20%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
V+IVMEL + ++++ ER + L + + G+ + HS G+ HRDLKP N +
Sbjct: 104 VYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIV-- 158
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVIL-- 139
V D LK DFGL+ + V + YY APEV L Y D+WS G I+
Sbjct: 159 -VKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 140 ----YILLSG-----------------VPPFWAETEIGIFRQILEGKIDFES----EPWP 174
IL G P F + + + R +E + + + +P
Sbjct: 218 MVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTV-RNYVENRPKYAGYSFEKLFP 276
Query: 175 NI------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
++ + A+DL+ KML + +R++ E L HP+I
Sbjct: 277 DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L+EE I K F M D D G I+ EL ++ +G + E+ +++ D D SGTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 307 DYGEFLAATLHLNKLE----REENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
D+ EFL + K + EE L F FDK+A G+I I+EL + G ++E
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 361 LDDMIKEIDQDD 372
++D++K+ D+++
Sbjct: 134 IEDLMKDSDKNN 145
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 18/145 (12%)
Query: 168 FESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLK 227
F+++ +IS + +ML QNP T E+ D + + D + +
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNP----TKEEL--------DAIIEEVDEDGSGTIDFE 76
Query: 228 HFSAMNKLKKMALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLM 287
F M +++M + A+ +EEE L + F++ D + G I +EL + L+ G +
Sbjct: 77 EFLVM-MVRQM--KEDAKGKSEEE---LADCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 288 ESEIKDLMDAADIDNSGTIDYGEFL 312
E +I+DLM +D +N G ID+ EFL
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYS--------EREAAKLMKTI 57
+H +V+R + + ++I +ELC +V+ N S E L++ I
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 58 VGVVECCHSLGVFHRDLKPENFLFLSVD----------EDAALKATDFGLSVFYKPDEV- 106
V HSL + HRDLKP+N L + E+ + +DFGL +
Sbjct: 143 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 107 ----FSDVVGSPYYVAPEVL----RKHYGPEADVWSAGVILYILLS-GVPPFWAE--TEI 155
++ G+ + APE+L ++ D++S G + Y +LS G PF + E
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 262
Query: 156 GIFRQIL---EGKIDFESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHP 205
I R I E K + ++ A DLI +M+D +P +R TA +VL HP
Sbjct: 263 NIIRGIFSLDEMKCLHDR----SLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYS--------EREAAKLMKTI 57
+H +V+R + + ++I +ELC +V+ N S E L++ I
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 58 VGVVECCHSLGVFHRDLKPENFLFLSVD----------EDAALKATDFGLSVFYKPDEV- 106
V HSL + HRDLKP+N L + E+ + +DFGL +
Sbjct: 143 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 107 ----FSDVVGSPYYVAPEVL----RKHYGPEADVWSAGVILYILLS-GVPPFWAE--TEI 155
++ G+ + APE+L ++ D++S G + Y +LS G PF + E
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 262
Query: 156 GIFRQIL---EGKIDFESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHP 205
I R I E K + ++ A DLI +M+D +P +R TA +VL HP
Sbjct: 263 NIIRGIFSLDEMKCLHDR----SLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 17 YEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLK 75
Y K + IV + CEG L+ + + + ++ + + ++ H+ + HRDLK
Sbjct: 88 YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 147
Query: 76 PENFLFLSVDEDAALKATDFGLSV---FYKPDEVFSDVVGSPYYVAPEVLRKH----YGP 128
N +FL ED +K DFGL+ + F + GS ++APEV+R Y
Sbjct: 148 SNN-IFL--HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 129 EADVWSAGVILYILLSGVPPF 149
++DV++ G++LY L++G P+
Sbjct: 205 QSDVYAFGIVLYELMTGQLPY 225
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 173 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 229
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 289
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 290 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 173 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 229
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 289
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 290 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 144 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 200
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 201 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 260
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 261 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 308
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 167 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 223
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 224 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 283
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 284 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 331
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 218 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 274
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 275 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 334
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 335 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 382
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 147 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 203
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 204 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 263
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 264 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 311
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 25 IVMELCEGGELFDRIVKKGN---YSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLF 81
+ ME CEGG+L + + N E L+ I + H + HRDLKPEN +
Sbjct: 96 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 155
Query: 82 LSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL-RKHYGPEADVWSAGVILY 140
+ K D G + E+ ++ VG+ Y+APE+L +K Y D WS G + +
Sbjct: 156 QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAF 215
Query: 141 ILLSGVPPF 149
++G PF
Sbjct: 216 ECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 25 IVMELCEGGELFDRIVKKGN---YSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLF 81
+ ME CEGG+L + + N E L+ I + H + HRDLKPEN +
Sbjct: 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 154
Query: 82 LSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL-RKHYGPEADVWSAGVILY 140
+ K D G + E+ ++ VG+ Y+APE+L +K Y D WS G + +
Sbjct: 155 QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAF 214
Query: 141 ILLSGVPPF 149
++G PF
Sbjct: 215 ECITGFRPF 223
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 177 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 233
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 234 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 293
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 294 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 341
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 175 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 231
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 232 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 291
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 292 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 339
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 158 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 214
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 215 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 274
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 275 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 322
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 151 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 207
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 267
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 268 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 315
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 151 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 207
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 267
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 268 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 315
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 152 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 208
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 209 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 268
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 269 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 316
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L+EE I K F M D D G I+ EL ++ +G + E+ +++ D D SGTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 307 DYGEFLAATLHLNKLE----REENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
D+ EFL + K + EE L + F FDK+A G+I I+EL + G + E
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 133
Query: 361 LDDMIKEIDQDD 372
++D++K+ D+++
Sbjct: 134 IEDLMKDSDKNN 145
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 18/145 (12%)
Query: 168 FESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLK 227
F+++ +IS + +ML QNP T E+ D + + D + +
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNP----TKEEL--------DAIIEEVDEDGSGTIDFE 76
Query: 228 HFSAMNKLKKMALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLM 287
F M +++M + A+ +EEE L F++ D + G I +EL + L+ G ++
Sbjct: 77 EFLVM-MVRQM--KEDAKGKSEEE---LANCFRIFDKNADGFIDIEELGEILRATGEHVI 130
Query: 288 ESEIKDLMDAADIDNSGTIDYGEFL 312
E +I+DLM +D +N G ID+ EFL
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L+EE I K F M D D G I+ EL ++ +G + E+ +++ D D SGTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 307 DYGEFLAATLHLNKLE----REENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
D+ EFL + K + EE L F FDK+A G+I I+EL + G ++E
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 361 LDDMIKEIDQDD 372
++D++K+ D+++
Sbjct: 134 IEDLMKDSDKNN 145
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 72/145 (49%), Gaps = 18/145 (12%)
Query: 168 FESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKPLDSAVLSRLK 227
F+++ +IS + +ML QNP T E+ D + + D + +
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNP----TKEEL--------DAIIEEVDEDGSGTIDFE 76
Query: 228 HFSAMNKLKKMALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLM 287
F M +++M + A+ +EEE L++ F++ D + G I +EL + L+ G +
Sbjct: 77 EFLVM-MVRQM--KEDAKGKSEEE---LEDCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 288 ESEIKDLMDAADIDNSGTIDYGEFL 312
E +I+DLM +D +N G ID+ EFL
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 139 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 143 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 199
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 200 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 259
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 260 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 307
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 139 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 256 EFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 140 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 196
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 197 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 256
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 257 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 304
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 139 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 139 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 139 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 256 EFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 139 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +VV + V IV+E E G L D ++K G ++ + +++ I +
Sbjct: 102 DHPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRY 160
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS--PYYVAP 119
+G HRDL N L V+ + K +DFGLS + P+ V++ G + AP
Sbjct: 161 LADMGYVHRDLAARNIL---VNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAP 217
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E ++ + + +DVWS G++++ ++S G P+W + + + I EG
Sbjct: 218 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 264
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 17 YEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLK 75
Y K + IV + CEG L+ + + + + + + + ++ H+ + HRDLK
Sbjct: 99 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 158
Query: 76 PENFLFLSVDEDAALKATDFGLSVF---YKPDEVFSDVVGSPYYVAPEVLRKH----YGP 128
N + ED +K DFGL+ + F + GS ++APEV+R Y
Sbjct: 159 SNNIF---LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 129 EADVWSAGVILYILLSGVPPF 149
++DV++ G++LY L++G P+
Sbjct: 216 QSDVYAFGIVLYELMTGQLPY 236
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 47/225 (20%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
V+IVMEL + ++++ ER + L + + G+ + HS G+ HRDLKP N +
Sbjct: 104 VYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIV-- 158
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVIL-- 139
V D LK DFGL+ + V + YY APEV L Y D+WS G I+
Sbjct: 159 -VKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGE 217
Query: 140 ----YILLSG-----------------VPPFWAETEIGIFRQILEGKIDFES----EPWP 174
IL G P F + + + R +E + + + +P
Sbjct: 218 MVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RTYVENRPKYAGYSFEKLFP 276
Query: 175 NI------------SESAKDLIRKMLDQNPKRRLTAHEVLCHPWI 207
++ + A+DL+ KML + +R++ E L HP+I
Sbjct: 277 DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAA-LKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL- 122
HS G+ HRD+KP+N L +D D A LK DFG + E + S YY APE++
Sbjct: 139 HSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 123 -RKHYGPEADVWSAGVILYILLSGVPPFWAETEI------------GIFRQILEGKIDF- 168
Y DVWSAG +L LL G P F ++ + QI E ++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255
Query: 169 -------ESEPW-----PNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
++ PW P A L ++L+ P RLT E H
Sbjct: 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 17 YEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLK 75
Y K + IV + CEG L+ + + + + + + + ++ H+ + HRDLK
Sbjct: 100 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 159
Query: 76 PENFLFLSVDEDAALKATDFGLSVF---YKPDEVFSDVVGSPYYVAPEVLRKH----YGP 128
N + ED +K DFGL+ + F + GS ++APEV+R Y
Sbjct: 160 SNNIF---LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 129 EADVWSAGVILYILLSGVPPF 149
++DV++ G++LY L++G P+
Sbjct: 217 QSDVYAFGIVLYELMTGQLPY 237
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
+ +++L GG+L + + G +SE + I+ +E H+ V +RDLKP N L
Sbjct: 266 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANIL-- 323
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRK--HYGPEADVWSAGVILY 140
+DE ++ +D GL+ + + + VG+ Y+APEVL+K Y AD +S G +L+
Sbjct: 324 -LDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 381
Query: 141 ILLSGVPPF 149
LL G PF
Sbjct: 382 KLLRGHSPF 390
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 43/237 (18%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYS--------EREAAKLMKTI 57
+H +V+R + + ++I +ELC +V+ N S E L++ I
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 58 VGVVECCHSLGVFHRDLKPENFLFLSVD----------EDAALKATDFGLSVFYKPDEV- 106
V HSL + HRDLKP+N L + E+ + +DFGL +
Sbjct: 125 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 184
Query: 107 ----FSDVVGSPYYVAPEVL--------RKHYGPEADVWSAGVILYILLS-GVPPFWAE- 152
++ G+ + APE+L ++ D++S G + Y +LS G PF +
Sbjct: 185 FRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244
Query: 153 -TEIGIFRQIL---EGKIDFESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHP 205
E I R I E K + ++ A DLI +M+D +P +R TA +VL HP
Sbjct: 245 SRESNIIRGIFSLDEMKCLHDR----SLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
+ +++L GG+L + + G +SE + I+ +E H+ V +RDLKP N L
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANIL-- 324
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRK--HYGPEADVWSAGVILY 140
+DE ++ +D GL+ + + + VG+ Y+APEVL+K Y AD +S G +L+
Sbjct: 325 -LDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 382
Query: 141 ILLSGVPPF 149
LL G PF
Sbjct: 383 KLLRGHSPF 391
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 26/190 (13%)
Query: 22 CVHIVMELCEGGELFDRIVKK-GNYSEREAA-KLMKTIVGVVECCHSLGVFHRDLKPENF 79
C+ I ME C+ G L I K+ G ++ A +L + I V+ HS + +RDLKP N
Sbjct: 94 CLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNI 153
Query: 80 LFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH-YGPEADVWSAGVI 138
+ + +K DFGL K D G+ Y++PE + YG E D+++ G+I
Sbjct: 154 FLVDTKQ---VKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLI 210
Query: 139 LYILLS------GVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDLIRKMLDQNP 192
L LL F+ + GI I + K K L++K+L + P
Sbjct: 211 LAELLHVCDTAFETSKFFTDLRDGIISDIFDKK--------------EKTLLQKLLSKKP 256
Query: 193 KRRLTAHEVL 202
+ R E+L
Sbjct: 257 EDRPNTSEIL 266
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 43/237 (18%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYS--------EREAAKLMKTI 57
+H +V+R + + ++I +ELC +V+ N S E L++ I
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 58 VGVVECCHSLGVFHRDLKPENFLFLSVD----------EDAALKATDFGLSVFYKPDEV- 106
V HSL + HRDLKP+N L + E+ + +DFGL +
Sbjct: 125 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
Query: 107 ----FSDVVGSPYYVAPEVL--------RKHYGPEADVWSAGVILYILLS-GVPPFWAE- 152
++ G+ + APE+L ++ D++S G + Y +LS G PF +
Sbjct: 185 FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244
Query: 153 -TEIGIFRQIL---EGKIDFESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHP 205
E I R I E K + ++ A DLI +M+D +P +R TA +VL HP
Sbjct: 245 SRESNIIRGIFSLDEMKCLHDR----SLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 17 YEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLK 75
Y K + IV + CEG L+ + + + + + + + ++ H+ + HRDLK
Sbjct: 77 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 136
Query: 76 PENFLFLSVDEDAALKATDFGLSVF---YKPDEVFSDVVGSPYYVAPEVLRKH----YGP 128
N + ED +K DFGL+ + F + GS ++APEV+R Y
Sbjct: 137 SNNIF---LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 129 EADVWSAGVILYILLSGVPPF 149
++DV++ G++LY L++G P+
Sbjct: 194 QSDVYAFGIVLYELMTGQLPY 214
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 17 YEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLK 75
Y K + IV + CEG L+ + + + + + + + ++ H+ + HRDLK
Sbjct: 74 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 133
Query: 76 PENFLFLSVDEDAALKATDFGLSVF---YKPDEVFSDVVGSPYYVAPEVLRKH----YGP 128
N + ED +K DFGL+ + F + GS ++APEV+R Y
Sbjct: 134 SNNIF---LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 129 EADVWSAGVILYILLSGVPPF 149
++DV++ G++LY L++G P+
Sbjct: 191 QSDVYAFGIVLYELMTGQLPY 211
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
+ +++L GG+L + + G +SE + I+ +E H+ V +RDLKP N L
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANIL-- 324
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRK--HYGPEADVWSAGVILY 140
+DE ++ +D GL+ + + + VG+ Y+APEVL+K Y AD +S G +L+
Sbjct: 325 -LDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 382
Query: 141 ILLSGVPPF 149
LL G PF
Sbjct: 383 KLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFL 82
+ +++L GG+L + + G +SE + I+ +E H+ V +RDLKP N L
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANIL-- 324
Query: 83 SVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRK--HYGPEADVWSAGVILY 140
+DE ++ +D GL+ + + + VG+ Y+APEVL+K Y AD +S G +L+
Sbjct: 325 -LDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 382
Query: 141 ILLSGVPPF 149
LL G PF
Sbjct: 383 KLLRGHSPF 391
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 17 YEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLK 75
Y K + IV + CEG L+ + + + + + + + ++ H+ + HRDLK
Sbjct: 72 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 131
Query: 76 PENFLFLSVDEDAALKATDFGLSVF---YKPDEVFSDVVGSPYYVAPEVLRKH----YGP 128
N + ED +K DFGL+ + F + GS ++APEV+R Y
Sbjct: 132 SNNIF---LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 129 EADVWSAGVILYILLSGVPPF 149
++DV++ G++LY L++G P+
Sbjct: 189 QSDVYAFGIVLYELMTGQLPY 209
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 17 YEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLK 75
Y K + IV + CEG L+ + + + + + + + ++ H+ + HRDLK
Sbjct: 77 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 136
Query: 76 PENFLFLSVDEDAALKATDFGLSVF---YKPDEVFSDVVGSPYYVAPEVLRKH----YGP 128
N + ED +K DFGL+ + F + GS ++APEV+R Y
Sbjct: 137 SNNIF---LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 129 EADVWSAGVILYILLSGVPPF 149
++DV++ G++LY L++G P+
Sbjct: 194 QSDVYAFGIVLYELMTGQLPY 214
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 12/204 (5%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKG-NYSEREAAKLMKTIVGVVE 62
+ +H VR+ +E+ +++ ELC G L G + E + ++ + +
Sbjct: 113 VGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALA 171
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL 122
HS G+ H D+KP N + K DFGL V G P Y+APE+L
Sbjct: 172 HLHSQGLVHLDVKPANIF---LGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELL 228
Query: 123 RKHYGPEADVWSAGV-ILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
+ YG ADV+S G+ IL + + P E ++Q+ +G + E +S +
Sbjct: 229 QGSYGTAADVFSLGLTILEVACNMELPHGGEG----WQQLRQGYLPPEFT--AGLSSELR 282
Query: 182 DLIRKMLDQNPKRRLTAHEVLCHP 205
++ ML+ +PK R TA +L P
Sbjct: 283 SVLVMMLEPDPKLRATAEALLALP 306
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 17 YEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLK 75
Y K + IV + CEG L+ + + + + + + + ++ H+ + HRDLK
Sbjct: 92 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 151
Query: 76 PENFLFLSVDEDAALKATDFGLSV---FYKPDEVFSDVVGSPYYVAPEVLRKH----YGP 128
N + ED +K DFGL+ + F + GS ++APEV+R Y
Sbjct: 152 SNNIF---LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 208
Query: 129 EADVWSAGVILYILLSGVPPF 149
++DV++ G++LY L++G P+
Sbjct: 209 QSDVYAFGIVLYELMTGQLPY 229
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 17 YEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLK 75
Y K + IV + CEG L+ + + + + + + + ++ H+ + HRDLK
Sbjct: 100 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 159
Query: 76 PENFLFLSVDEDAALKATDFGLSV---FYKPDEVFSDVVGSPYYVAPEVLRKH----YGP 128
N + ED +K DFGL+ + F + GS ++APEV+R Y
Sbjct: 160 SNNIF---LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 129 EADVWSAGVILYILLSGVPPF 149
++DV++ G++LY L++G P+
Sbjct: 217 QSDVYAFGIVLYELMTGQLPY 237
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++R+ IV E E G L D ++ G ++ + +++ + +
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGVGAGMRY 166
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
LG HRDL N L VD + K +DFGLS + PD ++ G P + AP
Sbjct: 167 LSDLGYVHRDLAARNVL---VDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAP 223
Query: 120 EVLR-KHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEG 164
E + + + +DVWS GV+++ +L G P+W T + + EG
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG 270
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 57 IVGVVECCHSLGVFHRDLKPENFLFLSVDED-AALKATDFGLSVFYKPDEVFSDVVGSPY 115
++ ++ CHS G+ HRD+KP N + +D + L+ D+GL+ FY P + ++ V S Y
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 191
Query: 116 YVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWA--------------------ET 153
+ PE+L + Y D+WS G + ++ PF+
Sbjct: 192 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 251
Query: 154 EIGIFRQILEGKID-----FESEPWPN---------ISESAKDLIRKMLDQNPKRRLTAH 199
+ +R L+ +++ +PW +S A D + K+L + + RLTA
Sbjct: 252 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 311
Query: 200 EVLCHPWIVDDKVA 213
E + HP+ + A
Sbjct: 312 EAMTHPYFQQVRAA 325
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 57 IVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPY 115
++ ++ CHS G+ HRD+KP N + +D E L+ D+GL+ FY P + ++ V S Y
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 191
Query: 116 YVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWA--------------------ET 153
+ PE+L + Y D+WS G + ++ PF+
Sbjct: 192 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 251
Query: 154 EIGIFRQILEGKID-----FESEPWPN---------ISESAKDLIRKMLDQNPKRRLTAH 199
+ +R L+ +++ +PW +S A D + K+L + + RLTA
Sbjct: 252 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 311
Query: 200 EVLCHPWIVDDKVA 213
E + HP+ + A
Sbjct: 312 EAMTHPYFQQVRAA 325
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 57 IVGVVECCHSLGVFHRDLKPENFLFLSVDED-AALKATDFGLSVFYKPDEVFSDVVGSPY 115
++ ++ CHS G+ HRD+KP N + +D + L+ D+GL+ FY P + ++ V S Y
Sbjct: 136 LLKALDYCHSQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 192
Query: 116 YVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWA--------------------ET 153
+ PE+L + Y D+WS G + ++ PF+
Sbjct: 193 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 252
Query: 154 EIGIFRQILEGKID-----FESEPWPN---------ISESAKDLIRKMLDQNPKRRLTAH 199
+ +R L+ +++ +PW +S A D + K+L + + RLTA
Sbjct: 253 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 312
Query: 200 EVLCHPWIVDDKVA 213
E + HP+ + A
Sbjct: 313 EAMTHPYFQQVRAA 326
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 57 IVGVVECCHSLGVFHRDLKPENFLFLSVDED-AALKATDFGLSVFYKPDEVFSDVVGSPY 115
++ ++ CHS G+ HRD+KP N + +D + L+ D+GL+ FY P + ++ V S Y
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 116 YVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWA--------------------ET 153
+ PE+L + Y D+WS G + ++ PF+
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 154 EIGIFRQILEGKID-----FESEPWPN---------ISESAKDLIRKMLDQNPKRRLTAH 199
+ +R L+ +++ +PW +S A D + K+L + + RLTA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 200 EVLCHPWIVDDKVA 213
E + HP+ + A
Sbjct: 311 EAMTHPYFQQVRAA 324
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 57 IVGVVECCHSLGVFHRDLKPENFLFLSVDED-AALKATDFGLSVFYKPDEVFSDVVGSPY 115
++ ++ CHS G+ HRD+KP N + +D + L+ D+GL+ FY P + ++ V S Y
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 116 YVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWA--------------------ET 153
+ PE+L + Y D+WS G + ++ PF+
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 154 EIGIFRQILEGKID-----FESEPWPN---------ISESAKDLIRKMLDQNPKRRLTAH 199
+ +R L+ +++ +PW +S A D + K+L + + RLTA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 200 EVLCHPWIVDDKVA 213
E + HP+ + A
Sbjct: 311 EAMTHPYFQQVRAA 324
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 57 IVGVVECCHSLGVFHRDLKPENFLFLSVDED-AALKATDFGLSVFYKPDEVFSDVVGSPY 115
++ ++ CHS G+ HRD+KP N + +D + L+ D+GL+ FY P + ++ V S Y
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 116 YVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWA--------------------ET 153
+ PE+L + Y D+WS G + ++ PF+
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 154 EIGIFRQILEGKID-----FESEPWPN---------ISESAKDLIRKMLDQNPKRRLTAH 199
+ +R L+ +++ +PW +S A D + K+L + + RLTA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 200 EVLCHPWIVDDKVA 213
E + HP+ + A
Sbjct: 311 EAMTHPYFQQVRAA 324
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 57 IVGVVECCHSLGVFHRDLKPENFLFLSVD-EDAALKATDFGLSVFYKPDEVFSDVVGSPY 115
++ ++ CHS G+ HRD+KP N + +D E L+ D+GL+ FY P + ++ V S Y
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 116 YVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWA--------------------ET 153
+ PE+L + Y D+WS G + ++ PF+
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 154 EIGIFRQILEGKID-----FESEPWPN---------ISESAKDLIRKMLDQNPKRRLTAH 199
+ +R L+ +++ +PW +S A D + K+L + + RLTA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 200 EVLCHPWIVDDKVA 213
E + HP+ + A
Sbjct: 311 EAMTHPYFQQVRAA 324
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 57 IVGVVECCHSLGVFHRDLKPENFLFLSVDED-AALKATDFGLSVFYKPDEVFSDVVGSPY 115
++ ++ CHS G+ HRD+KP N + +D + L+ D+GL+ FY P + ++ V S Y
Sbjct: 155 LLKALDYCHSQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 211
Query: 116 YVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWA--------------------ET 153
+ PE+L + Y D+WS G + ++ PF+
Sbjct: 212 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNA 271
Query: 154 EIGIFRQILEGKID-----FESEPWPN---------ISESAKDLIRKMLDQNPKRRLTAH 199
+ +R L+ +++ +PW +S A D + K+L + + RLTA
Sbjct: 272 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 331
Query: 200 EVLCHPWIVDDKVA 213
E + HP+ + A
Sbjct: 332 EAMTHPYFQQVRAA 345
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 57 IVGVVECCHSLGVFHRDLKPENFLFLSVDED-AALKATDFGLSVFYKPDEVFSDVVGSPY 115
++ ++ CHS G+ HRD+KP N + +D + L+ D+GL+ FY P + ++ V S Y
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 116 YVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWA--------------------ET 153
+ PE+L + Y D+WS G + ++ PF+
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 154 EIGIFRQILEGKID-----FESEPWPN---------ISESAKDLIRKMLDQNPKRRLTAH 199
+ +R L+ +++ +PW +S A D + K+L + + RLTA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 200 EVLCHPWIVDDKVA 213
E + HP+ + A
Sbjct: 311 EAMTHPYFQQVRAA 324
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 57 IVGVVECCHSLGVFHRDLKPENFLFLSVDED-AALKATDFGLSVFYKPDEVFSDVVGSPY 115
++ ++ CHS G+ HRD+KP N + +D + L+ D+GL+ FY P + ++ V S Y
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 116 YVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWA--------------------ET 153
+ PE+L + Y D+WS G + ++ PF+
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 154 EIGIFRQILEGKID-----FESEPWPN---------ISESAKDLIRKMLDQNPKRRLTAH 199
+ +R L+ +++ +PW +S A D + K+L + + RLTA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 200 EVLCHPWIVDDKVA 213
E + HP+ + A
Sbjct: 311 EAMTHPYFQQVRAA 324
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 11/141 (7%)
Query: 17 YEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLK 75
Y + IV + CEG L+ + + + ++ + + ++ H+ + HRDLK
Sbjct: 88 YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 147
Query: 76 PENFLFLSVDEDAALKATDFGLSV---FYKPDEVFSDVVGSPYYVAPEVLRKH----YGP 128
N +FL ED +K DFGL+ + F + GS ++APEV+R Y
Sbjct: 148 SNN-IFL--HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 129 EADVWSAGVILYILLSGVPPF 149
++DV++ G++LY L++G P+
Sbjct: 205 QSDVYAFGIVLYELMTGQLPY 225
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 17 YEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLK 75
Y K + IV + CEG L+ + + + + + + + ++ H+ + HRDLK
Sbjct: 72 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 131
Query: 76 PENFLFLSVDEDAALKATDFGLSV---FYKPDEVFSDVVGSPYYVAPEVLRKH----YGP 128
N + ED +K DFGL+ + F + GS ++APEV+R Y
Sbjct: 132 SNNIF---LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 129 EADVWSAGVILYILLSGVPPF 149
++DV++ G++LY L++G P+
Sbjct: 189 QSDVYAFGIVLYELMTGQLPY 209
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 29/201 (14%)
Query: 23 VHIVMELCEGG--ELFDRIVKKG-NYSEREAAKLMKTIVGVVECCHS-LGVFHRDLKPEN 78
V I MEL + + + +++ KG E K+ +IV +E HS L V HRD+KP N
Sbjct: 125 VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 184
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPDEVFSDV-VGSPYYVAPEVL-----RKHYGPEADV 132
L ++ + +K DFG+S Y D V + G Y+APE + +K Y ++D+
Sbjct: 185 VLINALGQ---VKMCDFGIS-GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDI 240
Query: 133 WSAGVILYILLSGVPPF--WAETEIGIFRQILEGKIDFESEPWPNI-----SESAKDLIR 185
WS G+ + L P+ W T +Q++E EP P + S D
Sbjct: 241 WSLGITMIELAILRFPYDSWG-TPFQQLKQVVE-------EPSPQLPADKFSAEFVDFTS 292
Query: 186 KMLDQNPKRRLTAHEVLCHPW 206
+ L +N K R T E++ HP+
Sbjct: 293 QCLKKNSKERPTYPELMQHPF 313
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 61.6 bits (148), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFLAATLH-LNKLEREENLLSAF 331
GTID+ EFL + + EE + AF
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAF 89
Score = 37.4 bits (85), Expect = 0.016, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 330 AFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
AFS FDKD G IT EL + G +E L DMI E+D D
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 58
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 61.2 bits (147), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFL 312
GTID+ EFL
Sbjct: 61 GTIDFPEFL 69
Score = 38.1 bits (87), Expect = 0.008, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 330 AFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
AFS FDKD G IT EL + G +E L DMI E+D D
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 58
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 61.2 bits (147), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFL 312
GTID+ EFL
Sbjct: 61 GTIDFPEFL 69
Score = 38.1 bits (87), Expect = 0.009, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 330 AFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
AFS FDKD G IT EL + G +E L DMI E+D D
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 58
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 61.2 bits (147), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 304 GTIDYGEFL 312
GTID+ EFL
Sbjct: 62 GTIDFPEFL 70
Score = 38.1 bits (87), Expect = 0.009, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 330 AFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
AFS FDKD G IT EL + G +E L DMI E+D D
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 105/256 (41%), Gaps = 62/256 (24%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSER--EAAKLMKTIVGVVECCHSL 67
V++ + +E + IV EL G +D I + G R K+ I V HS
Sbjct: 79 CVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN 137
Query: 68 GVFHRDLKPENFLFLSVDEDAA----------------LKATDFGLSVFYKPDEVFSDVV 111
+ H DLKPEN LF+ D A +K DFG + + DE S +V
Sbjct: 138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY--DDEHHSTLV 195
Query: 112 GSPYYVAPEV-LRKHYGPEADVWSAGVIL---YILLSGVPPFWAETEIGIFRQIL----- 162
+ +Y APEV L + DVWS G IL Y+ + P ++ + + +IL
Sbjct: 196 STRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPK 255
Query: 163 -------------EGKIDFE--SEPWPNISESAK-----------------DLIRKMLDQ 190
++D++ S +S + K DLI+KML+
Sbjct: 256 HMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEY 315
Query: 191 NPKRRLTAHEVLCHPW 206
+P +R+T E L HP+
Sbjct: 316 DPAKRITLREALKHPF 331
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 11/141 (7%)
Query: 17 YEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLK 75
Y + IV + CEG L+ + + + + + + + ++ H+ + HRDLK
Sbjct: 72 YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 131
Query: 76 PENFLFLSVDEDAALKATDFGLSVF---YKPDEVFSDVVGSPYYVAPEVLRKH----YGP 128
N + ED +K DFGL+ + F + GS ++APEV+R Y
Sbjct: 132 SNNIF---LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 129 EADVWSAGVILYILLSGVPPF 149
++DV++ G++LY L++G P+
Sbjct: 189 QSDVYAFGIVLYELMTGQLPY 209
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 61.2 bits (147), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFL 312
GTID+ EFL
Sbjct: 61 GTIDFPEFL 69
Score = 38.1 bits (87), Expect = 0.009, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 330 AFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
AFS FDKD G IT EL + G +E L DMI E+D D
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 58
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++R+ IV E E G L D ++ G ++ + +++ + +
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGVGAGMRY 166
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
LG HRDL N L VD + K +DFGLS + PD + G P + AP
Sbjct: 167 LSDLGYVHRDLAARNVL---VDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAP 223
Query: 120 EVLR-KHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEG 164
E + + + +DVWS GV+++ +L G P+W T + + EG
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG 270
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 60.8 bits (146), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFL 312
GTID+ EFL
Sbjct: 61 GTIDFPEFL 69
Score = 37.7 bits (86), Expect = 0.010, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 330 AFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
AFS FDKD G IT EL + G +E L DMI E+D D
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 58
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +V+ + + V I+ E E G L D +++ G ++ + +++ I ++
Sbjct: 92 DHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKY 150
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPY---YV 117
+ HRDL N L V+ + K +DFGLS F + D ++ +G +
Sbjct: 151 LADMNYVHRDLAARNIL---VNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 207
Query: 118 APEVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQI 161
APE ++ + + +DVWS G++++ ++S G P+W T + I
Sbjct: 208 APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 253
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 29/184 (15%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVE 62
H ++V + + + I ME +GG L D+++K EA ++ + I+G V
Sbjct: 69 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLK-------EAKRIPEEILGKVS 120
Query: 63 CCHSLG---------VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGS 113
G + HRD+KP N L V+ +K DFG+S D + + VG+
Sbjct: 121 IAVLRGLAYLREKHQIMHRDVKPSNIL---VNSRGEIKLCDFGVSGQLI-DSMANSFVGT 176
Query: 114 PYYVAPEVLR-KHYGPEADVWSAGVILYILLSG---VPPFWAETEIGIF-RQILEGKIDF 168
Y+APE L+ HY ++D+WS G+ L L G +PP A+ IF R +++G+
Sbjct: 177 RSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGE--- 233
Query: 169 ESEP 172
E EP
Sbjct: 234 EGEP 237
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++ + V IV E E G L D +KK G ++ + +++ I ++
Sbjct: 81 DHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAGMKY 139
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
+G HRDL N L ++ + K +DFGLS + P+ ++ G P + AP
Sbjct: 140 LSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAP 196
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E + + + +DVWS G++++ ++S G P+W T + + + EG
Sbjct: 197 EAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEG 243
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFL 312
GTID+ EFL
Sbjct: 61 GTIDFPEFL 69
Score = 37.7 bits (86), Expect = 0.012, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 330 AFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
AFS FDKD G IT EL + G +E L DMI E+D D
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 58
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 21/168 (12%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVECCHS 66
++V+ T+ + V I MEL G +++ K+ G ER K+ V +V+ +
Sbjct: 85 YIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKM---TVAIVKALYY 139
Query: 67 L----GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL 122
L GV HRD+KP N L +DE +K DFG+S D+ G Y+APE +
Sbjct: 140 LKEKHGVIHRDVKPSNIL---LDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERI 196
Query: 123 ------RKHYGPEADVWSAGVILYILLSGVPPFW-AETEIGIFRQILE 163
+ Y ADVWS G+ L L +G P+ +T+ + ++L+
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ 244
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++R+ V IV E E G L D ++K ++ + +++ I ++
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
+G HRDL N L ++ + K +DFGLS + P+ ++ G P + +P
Sbjct: 163 LSDMGAVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E + + + +DVWS G++L+ ++S G P+W + + + + EG
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L+EE I K F M D D G I+ EL ++ +G + E+ +++ D D SGTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 307 DYGEFLAATLHL----NKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
D+ EFL + K + EE L F FD++A GYI +EL + G +++
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 361 LDDMIKEIDQDD 372
++ ++K+ D+++
Sbjct: 131 IESLMKDGDKNN 142
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L E F++ D + G I +EL + + G + + EI+ LM D +N G ID+ EFL
Sbjct: 95 LAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFL 152
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 60.1 bits (144), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 43/69 (62%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 304 GTIDYGEFL 312
GTID+ EFL
Sbjct: 61 GTIDFPEFL 69
Score = 37.4 bits (85), Expect = 0.013, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 330 AFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
AFS FDKD G IT EL + G +E L DMI E+D D
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 58
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 48/248 (19%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKL-MKTIVGVV 61
H ++V + + + I ME +GG L + K G E+ K+ + I G+
Sbjct: 86 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 145
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
+ HRD+KP N L V+ +K DFG+S D + + VG+ Y++PE
Sbjct: 146 YLREKHKIMHRDVKPSNIL---VNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPER 201
Query: 122 LR-KHYGPEADVWSAGVILYILLSG----VPPFWAETEIGIFRQILEG------------ 164
L+ HY ++D+WS G+ L + G PP E E+ +F +EG
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL-MFGCQVEGDAAETPPRPRTP 260
Query: 165 -----KIDFES---------------EPWPNISESA-----KDLIRKMLDQNPKRRLTAH 199
K +S EP P + +D + K L +NP R
Sbjct: 261 GRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 320
Query: 200 EVLCHPWI 207
+++ H +I
Sbjct: 321 QLMVHAFI 328
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 35/178 (19%)
Query: 6 EHQHVVRIHDTYEDKSC------------VHIVMELCEGGELFDRIVKKGNYSEREAAKL 53
EH +VR + + +K+ ++I M+LC L D + + ERE +
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 54 MKTIVGV---VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV 110
+ + + VE HS G+ HRDLKP N F D +K DFGL DE V
Sbjct: 121 LHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 111 -------------VGSPYYVAPEVLRKH-YGPEADVWSAGVILYILLSGVPPFWAETE 154
VG+ Y++PE + + Y + D++S G+IL+ LL PF + E
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME 232
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 11/141 (7%)
Query: 17 YEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLK 75
Y K + IV + CEG L+ + V++ + + + + ++ H+ + HRD+K
Sbjct: 100 YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMK 159
Query: 76 PENFLFLSVDEDAALKATDFGLSVF---YKPDEVFSDVVGSPYYVAPEVLRKH----YGP 128
N +FL E +K DFGL+ + + GS ++APEV+R +
Sbjct: 160 SNN-IFL--HEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 129 EADVWSAGVILYILLSGVPPF 149
++DV+S G++LY L++G P+
Sbjct: 217 QSDVYSYGIVLYELMTGELPY 237
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++R+ V IV E E G L D ++K ++ + +++ I ++
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
+G HRDL N L ++ + K +DFGLS + P+ ++ G P + +P
Sbjct: 134 LSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E + + + +DVWS G++L+ ++S G P+W + + + + EG
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++R+ V IV E E G L D ++K ++ + +++ I ++
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
+G HRDL N L ++ + K +DFGLS + P+ ++ G P + +P
Sbjct: 163 LSDMGFVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E + + + +DVWS G++L+ ++S G P+W + + + + EG
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++R+ V IV E E G L D ++K ++ + +++ I ++
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
+G HRDL N L ++ + K +DFGLS + P+ ++ G P + +P
Sbjct: 134 LSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E + + + +DVWS G++L+ ++S G P+W + + + + EG
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 27/188 (14%)
Query: 34 ELFDRIVKKG-NYSEREAAKLMKTIVGVVECCHS-LGVFHRDLKPENFLFLSVDEDAALK 91
+ + +++ KG E K+ +IV +E HS L V HRD+KP N L ++ + +K
Sbjct: 121 KFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ---VK 177
Query: 92 ATDFGLSVFYKPDEVFSDV------VGSPYYVAPEVLRKHYGPEADVWSAGVILYILLSG 145
DFG+S Y D+V D+ +P + PE+ +K Y ++D+WS G+ L
Sbjct: 178 XCDFGIS-GYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAIL 236
Query: 146 VPPF--WAETEIGIFRQILEGKIDFESEPWPNI-----SESAKDLIRKMLDQNPKRRLTA 198
P+ W T +Q++E EP P + S D + L +N K R T
Sbjct: 237 RFPYDSWG-TPFQQLKQVVE-------EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTY 288
Query: 199 HEVLCHPW 206
E+ HP+
Sbjct: 289 PELXQHPF 296
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 48/248 (19%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKL-MKTIVGVV 61
H ++V + + + I ME +GG L + K G E+ K+ + I G+
Sbjct: 121 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 180
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
+ HRD+KP N L V+ +K DFG+S D + + VG+ Y++PE
Sbjct: 181 YLREKHKIMHRDVKPSNIL---VNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPER 236
Query: 122 LR-KHYGPEADVWSAGVILYILLSG----VPPFWAETEIGIFRQILEGKID--------- 167
L+ HY ++D+WS G+ L + G PP E E+ +F +EG
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL-MFGCQVEGDAAETPPRPRTP 295
Query: 168 -----------------FE------SEPWPNISESA-----KDLIRKMLDQNPKRRLTAH 199
FE +EP P + + +D + K L +NP R
Sbjct: 296 GRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLK 355
Query: 200 EVLCHPWI 207
+++ H +I
Sbjct: 356 QLMVHAFI 363
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 20/141 (14%)
Query: 20 KSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV---VECCHSLGVFHRDLKP 76
K ++I M+LC L D + ++ + +RE + + + VE HS G+ HRDLKP
Sbjct: 133 KVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKP 192
Query: 77 ENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDV-------------VGSPYYVAPEVLR 123
N F D +K DFGL DE V VG+ Y++PE +
Sbjct: 193 SNIFFTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIH 249
Query: 124 -KHYGPEADVWSAGVILYILL 143
+Y + D++S G+IL+ LL
Sbjct: 250 GNNYSHKVDIFSLGLILFELL 270
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 20/194 (10%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGEL--FDRIVKKGNYSEREAAKLMKTIVGVVEC 63
EH +++R+ + V I+ E E G L F R+ G ++ + +++ I +
Sbjct: 73 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRY 131
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPY---YV 117
+ HRDL N L V+ + K +DFGLS F + D ++ +G +
Sbjct: 132 LAEMSYVHRDLAARNIL---VNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT 188
Query: 118 APEVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEGKIDFESEPWPN 175
APE + + + +D WS G++++ ++S G P+W + + I + D+ P P+
Sbjct: 189 APEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ---DYRLPPPPD 245
Query: 176 ISESAKDLIRKMLD 189
S L MLD
Sbjct: 246 CPTSLHQL---MLD 256
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKL-MKTIVGVV 61
H ++V + + + I ME +GG L + K G E+ K+ + I G+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
+ HRD+KP N L V+ +K DFG+S D + + VG+ Y++PE
Sbjct: 119 YLREKHKIMHRDVKPSNIL---VNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPER 174
Query: 122 LR-KHYGPEADVWSAGVILYILLSG---VPP 148
L+ HY ++D+WS G+ L + G +PP
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKL-MKTIVGVV 61
H ++V + + + I ME +GG L + K G E+ K+ + I G+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
+ HRD+KP N L V+ +K DFG+S D + + VG+ Y++PE
Sbjct: 119 YLREKHKIMHRDVKPSNIL---VNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPER 174
Query: 122 LR-KHYGPEADVWSAGVILYILLSG---VPP 148
L+ HY ++D+WS G+ L + G +PP
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++R+ V IV E E G L D ++K ++ + +++ I ++
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
+G HRDL N L ++ + K +DFGLS + P+ ++ G P + +P
Sbjct: 163 LSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E + + + +DVWS G++L+ ++S G P+W + + + + EG
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++R+ V IV E E G L D ++K ++ + +++ I ++
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
+G HRDL N L ++ + K +DFGLS + P+ ++ G P + +P
Sbjct: 163 LSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E + + + +DVWS G++L+ ++S G P+W + + + + EG
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++R+ V IV E E G L D ++K ++ + +++ I ++
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
+G HRDL N L ++ + K +DFGLS + P+ ++ G P + +P
Sbjct: 163 LSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E + + + +DVWS G++L+ ++S G P+W + + + + EG
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++R+ V IV E E G L D ++K ++ + +++ I ++
Sbjct: 92 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 150
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
+G HRDL N L ++ + K +DFGLS + P+ ++ G P + +P
Sbjct: 151 LSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 207
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E + + + +DVWS G++L+ ++S G P+W + + + + EG
Sbjct: 208 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 254
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 104/256 (40%), Gaps = 62/256 (24%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSER--EAAKLMKTIVGVVECCHSL 67
V++ + +E + IV EL G +D I + G R K+ I V HS
Sbjct: 79 CVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN 137
Query: 68 GVFHRDLKPENFLFLSVDEDAA----------------LKATDFGLSVFYKPDEVFSDVV 111
+ H DLKPEN LF+ D A +K DFG + + DE S +V
Sbjct: 138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY--DDEHHSTLV 195
Query: 112 GSPYYVAPEV-LRKHYGPEADVWSAGVIL---YILLSGVPPFWAETEIGIFRQIL----- 162
+Y APEV L + DVWS G IL Y+ + P ++ + + +IL
Sbjct: 196 XXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPK 255
Query: 163 -------------EGKIDFE--SEPWPNISESAK-----------------DLIRKMLDQ 190
++D++ S +S + K DLI+KML+
Sbjct: 256 HMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEY 315
Query: 191 NPKRRLTAHEVLCHPW 206
+P +R+T E L HP+
Sbjct: 316 DPAKRITLREALKHPF 331
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++R+ V IV E E G L D ++K ++ + +++ I ++
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
+G HRDL N L ++ + K +DFGLS + P+ ++ G P + +P
Sbjct: 163 LSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E + + + +DVWS G++L+ ++S G P+W + + + + EG
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++R+ V IV E E G L D ++K ++ + +++ I ++
Sbjct: 102 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 160
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
+G HRDL N L ++ + K +DFGLS + P+ ++ G P + +P
Sbjct: 161 LSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 217
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E + + + +DVWS G++L+ ++S G P+W + + + + EG
Sbjct: 218 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 264
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++R+ V IV E E G L D ++K ++ + +++ I ++
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
+G HRDL N L ++ + K +DFGLS + P+ ++ G P + +P
Sbjct: 163 LSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E + + + +DVWS G++L+ ++S G P+W + + + + EG
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 59.3 bits (142), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 245 ERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSG 304
++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 305 TIDYGEFL 312
TID+ EFL
Sbjct: 62 TIDFPEFL 69
Score = 37.7 bits (86), Expect = 0.009, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 330 AFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
AFS FDKD G IT EL + G +E L DMI E+D D
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 58
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKL-MKTIVGVV 61
H ++V + + + I ME +GG L + K G E+ K+ + I G+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
+ HRD+KP N L V+ +K DFG+S D + + VG+ Y++PE
Sbjct: 119 YLREKHKIMHRDVKPSNIL---VNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPER 174
Query: 122 LR-KHYGPEADVWSAGVILYILLSG---VPP 148
L+ HY ++D+WS G+ L + G +PP
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 3 HLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKL-MKTIVGVV 61
H ++V + + + I ME +GG L + K G E+ K+ + I G+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
+ HRD+KP N L V+ +K DFG+S D + + VG+ Y++PE
Sbjct: 119 YLREKHKIMHRDVKPSNIL---VNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPER 174
Query: 122 LR-KHYGPEADVWSAGVILYILLSG---VPP 148
L+ HY ++D+WS G+ L + G +PP
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L+EE I K F M D D G I+ EL ++ +G + E+ +++ D D SGTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 307 DYGEFLAATLHL----NKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELH 360
D+ EFL + K + EE L F FD++A GYI +EL + G +++
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 361 LDDMIKEIDQDD 372
++ ++K+ D+++
Sbjct: 131 IESLMKDGDKNN 142
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L ELF++ D + G I +EL + + G + + EI+ LM D +N G ID+ EFL
Sbjct: 95 LAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFL 152
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 84/212 (39%), Gaps = 59/212 (27%)
Query: 52 KLMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVV 111
K +I+ ++ H + H DLKPEN L L + +K DFG S Y+ V++ +
Sbjct: 204 KFAHSILQCLDALHKNRIIHCDLKPENIL-LKQQGRSGIKVIDFGSSC-YEHQRVYTXIQ 261
Query: 112 GSPYYVAPEV-LRKHYGPEADVWSAGVILYILLSGVPPFWAETE----------IGIFRQ 160
S +Y APEV L YG D+WS G IL LL+G P E E +G+ Q
Sbjct: 262 -SRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ 320
Query: 161 IL--------------------------------------EGKIDF--ESEPWPNISESA 180
L GK+ ES W N +
Sbjct: 321 KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGC 380
Query: 181 K-----DLIRKMLDQNPKRRLTAHEVLCHPWI 207
D +++ L+ +P R+T + L HPW+
Sbjct: 381 DDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 24/203 (11%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAA-KLMKTIVGVVECCH 65
H ++V+++ + +VME G+L+ R++ K + + +LM I +E
Sbjct: 82 HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 66 SLG--VFHRDLKPENFLFLSVDEDAAL--KATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
+ + HRDL+ N S+DE+A + K DFGLS + S ++G+ ++APE
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS--QQSVHSVSGLLGNFQWMAPET 197
Query: 122 L---RKHYGPEADVWSAGVILYILLSGVPPF--WAETEIGIFRQILEGKIDFESEPWPNI 176
+ + Y +AD +S +ILY +L+G PF ++ +I I E + P I
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR------PTI 251
Query: 177 SESAKDLIRKMLD----QNPKRR 195
E +R +++ +PK+R
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKR 274
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 103/252 (40%), Gaps = 44/252 (17%)
Query: 6 EHQHVVRIHD------TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H +++ I D Y + V++V++L E +L I + + ++
Sbjct: 111 KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLR 169
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDE---VFSDVVGSP 114
++ HS V HRDLKP N L V+E+ LK DFG++ + P E ++ V +
Sbjct: 170 GLKYMHSAQVIHRDLKPSNLL---VNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 115 YYVAPEVLRK--HYGPEADVWSAGVI---------------------LYILLSGVPPFWA 151
+Y APE++ Y D+WS G I L +++ G P
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV 286
Query: 152 ETEIGI--FRQILEGKIDFESEPW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHP 205
+G R ++ + PW P A L+ +ML P R++A L HP
Sbjct: 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP 346
Query: 206 WIVDDKVAPDKP 217
++ D+P
Sbjct: 347 FLAKYHDPDDEP 358
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 230 SAMNKLKKMALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMES 289
+ M KL+ L A I GL F+ +D D S ++ DE + GL ++G L ++
Sbjct: 19 ATMEKLRAQCLSRGAS-----GIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQA 73
Query: 290 EIKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDASGYITIDELQ 348
E + + D + SGT+D EFL A RE + +AF+ D+ G +T+D+L+
Sbjct: 74 EAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLR 132
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 84/212 (39%), Gaps = 59/212 (27%)
Query: 52 KLMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVV 111
K +I+ ++ H + H DLKPEN L L + +K DFG S Y+ V++ +
Sbjct: 204 KFAHSILQCLDALHKNRIIHCDLKPENIL-LKQQGRSGIKVIDFGSSC-YEHQRVYTXIQ 261
Query: 112 GSPYYVAPEV-LRKHYGPEADVWSAGVILYILLSGVPPFWAETE----------IGIFRQ 160
S +Y APEV L YG D+WS G IL LL+G P E E +G+ Q
Sbjct: 262 -SRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ 320
Query: 161 IL--------------------------------------EGKIDF--ESEPWPNISESA 180
L GK+ ES W N +
Sbjct: 321 KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGC 380
Query: 181 K-----DLIRKMLDQNPKRRLTAHEVLCHPWI 207
D +++ L+ +P R+T + L HPW+
Sbjct: 381 DDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG----VVE 62
H ++VR+ K ++IVMEL +GG+ + +G R K + +VG +E
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGME 227
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG----SPYYVA 118
S HRDL N L V E LK +DFG+S + D V++ G + A
Sbjct: 228 YLESKCCIHRDLAARNCL---VTEKNVLKISDFGMSR-EEADGVYAASGGLRQVPVKWTA 283
Query: 119 PEVLR-KHYGPEADVWSAGVILYILLS-GVPPF 149
PE L Y E+DVWS G++L+ S G P+
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++R+ V IV E E G L D ++K ++ + +++ I ++
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
+G HRDL N L ++ + K +DFGL+ + P+ ++ G P + +P
Sbjct: 163 LSDMGYVHRDLAARNIL---INSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E + + + +DVWS G++L+ ++S G P+W + + + + EG
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 58.5 bits (140), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 245 ERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSG 304
++L EE+I KE F + D D GTIT EL ++ +G E+E++D+++ D D +G
Sbjct: 2 DQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNG 61
Query: 305 TIDYGEFLAATLHLNK 320
TID+ EFL + K
Sbjct: 62 TIDFPEFLTMMARIMK 77
Score = 38.5 bits (88), Expect = 0.006, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 330 AFSFFDKDASGYITIDELQHACKEFGI--SELHLDDMIKEIDQD 371
AFS +DKD G IT EL + G+ +E L DMI E+D D
Sbjct: 15 AFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDAD 58
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV---VEC 63
H ++V+++ + C +VME EGG L++ + AA M + V
Sbjct: 60 HPNIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 117
Query: 64 CHSL---GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE 120
HS+ + HRDLKP N L V LK DFG + + ++ GS ++APE
Sbjct: 118 LHSMQPKALIHRDLKPPNLLL--VAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPE 173
Query: 121 VLR-KHYGPEADVWSAGVILYILLSGVPPFWAETEIG--IFRQILEGKIDFESEPWPNIS 177
V +Y + DV+S G+IL+ +++ PF EIG FR + N+
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVITRRKPF---DEIGGPAFRIMWAVHNGTRPPLIKNLP 230
Query: 178 ESAKDLIRKMLDQNPKRRLTAHEVL 202
+ + L+ + ++P +R + E++
Sbjct: 231 KPIESLMTRCWSKDPSQRPSMEEIV 255
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V ++ + V+I MEL EGG L I + G E A + + +E H+ +
Sbjct: 126 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRI 185
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVV------GSPYYVAPE-VL 122
H D+K +N L S AAL DFG ++ +PD + ++ G+ ++APE V+
Sbjct: 186 LHGDVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 243
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPF 149
K + D+WS+ ++ +L+G P+
Sbjct: 244 GKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V ++ + V+I MEL EGG L I + G E A + + +E H+ +
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRI 171
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVV------GSPYYVAPE-VL 122
H D+K +N L S AAL DFG ++ +PD + ++ G+ ++APE V+
Sbjct: 172 LHGDVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 229
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPF 149
K + D+WS+ ++ +L+G P+
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +V+ + + V I+ E E G L D +++ G ++ + +++ I ++
Sbjct: 66 DHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKY 124
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK---PDEVFSDVVGSPY---YV 117
+ HR L N L V+ + K +DFGLS F + D ++ +G +
Sbjct: 125 LADMNYVHRALAARNIL---VNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 181
Query: 118 APEVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQI 161
APE ++ + + +DVWS G++++ ++S G P+W T + I
Sbjct: 182 APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 227
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 83/212 (39%), Gaps = 59/212 (27%)
Query: 52 KLMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVV 111
K +I+ ++ H + H DLKPEN L L + +K DFG S Y+ V+ +
Sbjct: 204 KFAHSILQCLDALHKNRIIHCDLKPENIL-LKQQGRSGIKVIDFGSSC-YEHQRVYXXIQ 261
Query: 112 GSPYYVAPEV-LRKHYGPEADVWSAGVILYILLSGVPPFWAETE----------IGIFRQ 160
S +Y APEV L YG D+WS G IL LL+G P E E +G+ Q
Sbjct: 262 -SRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQ 320
Query: 161 IL--------------------------------------EGKIDF--ESEPWPNISESA 180
L GK+ ES W N +
Sbjct: 321 KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGC 380
Query: 181 K-----DLIRKMLDQNPKRRLTAHEVLCHPWI 207
D +++ L+ +P R+T + L HPW+
Sbjct: 381 DDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 20/194 (10%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGEL--FDRIVKKGNYSEREAAKLMKTIVGVVEC 63
EH +++R+ + V I+ E E G L F R+ G ++ + +++ I +
Sbjct: 75 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRY 133
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK-----PDEVFSDVVGSPY-YV 117
+ HRDL N L V+ + K +DFGLS F + P E S P +
Sbjct: 134 LAEMSYVHRDLAARNIL---VNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT 190
Query: 118 APEVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEGKIDFESEPWPN 175
APE + + + +D WS G++++ ++S G P+W + + I + D+ P P+
Sbjct: 191 APEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ---DYRLPPPPD 247
Query: 176 ISESAKDLIRKMLD 189
S L MLD
Sbjct: 248 CPTSLHQL---MLD 258
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 10 VVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLGV 69
+V ++ + V+I MEL EGG L I + G E A + + +E H+ +
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRI 187
Query: 70 FHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVV------GSPYYVAPE-VL 122
H D+K +N L S AAL DFG ++ +PD + ++ G+ ++APE V+
Sbjct: 188 LHGDVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 245
Query: 123 RKHYGPEADVWSAGVILYILLSGVPPF 149
K + D+WS+ ++ +L+G P+
Sbjct: 246 GKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGV---VEC 63
H ++V+++ + C +VME EGG L++ + AA M + V
Sbjct: 61 HPNIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 118
Query: 64 CHSL---GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPE 120
HS+ + HRDLKP N L V LK DFG + + ++ GS ++APE
Sbjct: 119 LHSMQPKALIHRDLKPPNLLL--VAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPE 174
Query: 121 VLR-KHYGPEADVWSAGVILYILLSGVPPFWAETEIG--IFRQILEGKIDFESEPWPNIS 177
V +Y + DV+S G+IL+ +++ PF EIG FR + N+
Sbjct: 175 VFEGSNYSEKCDVFSWGIILWEVITRRKPF---DEIGGPAFRIMWAVHNGTRPPLIKNLP 231
Query: 178 ESAKDLIRKMLDQNPKRRLTAHEVL 202
+ + L+ + ++P +R + E++
Sbjct: 232 KPIESLMTRCWSKDPSQRPSMEEIV 256
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++R+ V IV E E G L D ++K ++ + +++ I ++
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
+G HRDL N L ++ + K +DFGL + P+ ++ G P + +P
Sbjct: 163 LSDMGYVHRDLAARNIL---INSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E + + + +DVWS G++L+ ++S G P+W + + + + EG
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 42/235 (17%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCH 65
H +V+++ +++ + +V E E G L D + ++G ++ A L+ + V E
Sbjct: 61 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA---AETLLGMCLDVCEGMA 117
Query: 66 SL---GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY---YVAP 119
L V HRDL N L V E+ +K +DFG++ F D+ ++ G+ + + +P
Sbjct: 118 YLEEASVIHRDLAARNCL---VGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASP 173
Query: 120 EVLR-KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE 178
EV Y ++DVWS GV+++ + S EGKI +E+ + SE
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFS------------------EGKIPYENR---SNSE 212
Query: 179 SAKDLIRKMLDQNPKRRLT-AHEVLCHPWIVDDKVAP-DKPLDSAVLSRLKHFSA 231
+D+ P+ T ++++ H W K P D+P S +L +L +A
Sbjct: 213 VVEDISTGFRLYKPRLASTHVYQIMNHCW----KERPEDRPAFSRLLRQLAAIAA 263
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 103/252 (40%), Gaps = 44/252 (17%)
Query: 6 EHQHVVRIHD------TYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG 59
+H +++ I D Y + V++V++L E +L I + + ++
Sbjct: 112 KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLR 170
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDE---VFSDVVGSP 114
++ HS V HRDLKP N L V+E+ LK DFG++ + P E ++ V +
Sbjct: 171 GLKYMHSAQVIHRDLKPSNLL---VNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 115 YYVAPEVLRK--HYGPEADVWSAGVI---------------------LYILLSGVPPFWA 151
+Y APE++ Y D+WS G I L +++ G P
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV 287
Query: 152 ETEIGI--FRQILEGKIDFESEPW----PNISESAKDLIRKMLDQNPKRRLTAHEVLCHP 205
+G R ++ + PW P A L+ +ML P R++A L HP
Sbjct: 288 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP 347
Query: 206 WIVDDKVAPDKP 217
++ D+P
Sbjct: 348 FLAKYHDPDDEP 359
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIV---KKGNYSEREAAKLMKTIVGVVE 62
+H+++V + D + +V G L DR+ S K+ + +
Sbjct: 88 QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 147
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGL---SVFYKPDEVFSDVVGSPYYVAP 119
H HRD+K N L +DE K +DFGL S + + S +VG+ Y+AP
Sbjct: 148 FLHENHHIHRDIKSANIL---LDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAP 204
Query: 120 EVLRKHYGPEADVWSAGVILYILLSGVP 147
E LR P++D++S GV+L +++G+P
Sbjct: 205 EALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +++ + + + +VME GG L +R++ I + H
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLH 122
Query: 66 S---LGVFHRDLKPENFLFLSVDEDA-----ALKATDFGLSVFYKPDEVFSDVVGSPYYV 117
+ + HRDLK N L L E+ LK TDFGL+ + S G+ ++
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMS-AAGAYAWM 181
Query: 118 APEVLRKH-YGPEADVWSAGVILYILLSGVPPF 149
APEV+R + +DVWS GV+L+ LL+G PF
Sbjct: 182 APEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIV--KKGNYSEREAAKLMKTIVGVVECC 64
H +++R+ + I+ E E G L D+ + K G +S + +++ I ++
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAPE 120
++ HRDL N L V+ + K +DFGLS + P+ ++ G P + APE
Sbjct: 164 ANMNYVHRDLAARNIL---VNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 220
Query: 121 VLR-KHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEG 164
+ + + +DVWS G++++ ++ G P+W + + + I +G
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG 266
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 3/128 (2%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L EE+ ++E F + D D +GTI ELK + +G + + EIK + D + +G
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKX 84
Query: 307 DYGEFLAA-TLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDD 363
++G+FL T ++ + +E +L AF FD D +G I+ L+ KE G +++ L +
Sbjct: 85 NFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQE 144
Query: 364 MIKEIDQD 371
I E D+D
Sbjct: 145 XIDEADRD 152
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 259 FKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
FK+ D D +G I+F LK K +G L + E+++ +D AD D G + EFL
Sbjct: 110 FKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEFL 163
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 7/139 (5%)
Query: 241 RVIAERLNEEEIGGLKELFKM-IDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAAD 299
+ E+L EE+ K F + + G+I+ EL ++ +G E+++++D D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 300 IDNSGTIDYGEFLAATLHL----NKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG 355
D SGT+D+ EFL + +K + EE L F FDK+A GYI +DEL+ + G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATG 125
Query: 356 --ISELHLDDMIKEIDQDD 372
I+E +++++K+ D+++
Sbjct: 126 ETITEDDIEELMKDGDKNN 144
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L +LF+M D + G I DELK L+ G + E +I++LM D +N G IDY E+L
Sbjct: 97 LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWL 154
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 57.4 bits (137), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A++L +E+I KE F + D D G IT EL ++ +G E+E++D+++ D D +
Sbjct: 1 ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 304 GTIDYGEFL 312
GTID+ EFL
Sbjct: 61 GTIDFPEFL 69
Score = 37.7 bits (86), Expect = 0.012, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 322 EREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
E+ AFS FDKD G IT EL + G +E L DMI E+D D
Sbjct: 7 EQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 58
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 85/199 (42%), Gaps = 30/199 (15%)
Query: 25 IVMELCEGG--ELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSLG--VFHRDLKPENFL 80
++ ELC+G E ++ +G S K+ V+ H + HRDLK EN L
Sbjct: 111 LLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLL 170
Query: 81 FLSVDEDAALKATDFG--LSVFYKPDEVFS-----------DVVGSPYYVAPEVLRKH-- 125
+ +K DFG ++ + PD +S +P Y PE++ +
Sbjct: 171 ---LSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSN 227
Query: 126 --YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAKDL 183
G + D+W+ G ILY+L PF E G +I+ GK + P L
Sbjct: 228 FPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLRIVNGK--YSIPPHDTQYTVFHSL 281
Query: 184 IRKMLDQNPKRRLTAHEVL 202
IR ML NP+ RL+ EV+
Sbjct: 282 IRAMLQVNPEERLSIAEVV 300
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 17/153 (11%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVG----VVE 62
H ++VR+ K ++IVMEL +GG+ + +G R K + +VG +E
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGME 227
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG----SPYYVA 118
S HRDL N L V E LK +DFG+S + D V + G + A
Sbjct: 228 YLESKCCIHRDLAARNCL---VTEKNVLKISDFGMSR-EEADGVXAASGGLRQVPVKWTA 283
Query: 119 PEVLR-KHYGPEADVWSAGVILYILLS-GVPPF 149
PE L Y E+DVWS G++L+ S G P+
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 44/229 (19%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCH 65
H +V+++ +++ + +V E E G L D + ++G ++ A L+ + V E
Sbjct: 59 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA---AETLLGMCLDVCEGMA 115
Query: 66 SL---GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY---YVAP 119
L V HRDL N L V E+ +K +DFG++ F D+ ++ G+ + + +P
Sbjct: 116 YLEEACVIHRDLAARNCL---VGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASP 171
Query: 120 EVLR-KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE 178
EV Y ++DVWS GV+++ + S EGKI +E+ + SE
Sbjct: 172 EVFSFSRYSSKSDVWSFGVLMWEVFS------------------EGKIPYENR---SNSE 210
Query: 179 SAKDLIRKMLDQNPKRRLT-AHEVLCHPWIVDDKVAPDKPLDSAVLSRL 226
+D+ P+ T ++++ H W ++P D SRL
Sbjct: 211 VVEDISTGFRLYKPRLASTHVYQIMNHCW-------KERPEDRPAFSRL 252
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 24/203 (11%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAA-KLMKTIVGVVECCH 65
H ++V+++ + +VME G+L+ R++ K + + +LM I +E
Sbjct: 82 HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 66 SLG--VFHRDLKPENFLFLSVDEDAAL--KATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
+ + HRDL+ N S+DE+A + K DFG S + S ++G+ ++APE
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS--QQSVHSVSGLLGNFQWMAPET 197
Query: 122 L---RKHYGPEADVWSAGVILYILLSGVPPF--WAETEIGIFRQILEGKIDFESEPWPNI 176
+ + Y +AD +S +ILY +L+G PF ++ +I I E + P I
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR------PTI 251
Query: 177 SESAKDLIRKMLD----QNPKRR 195
E +R +++ +PK+R
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKR 274
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 44/229 (19%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCH 65
H +V+++ +++ + +V E E G L D + ++G ++ A L+ + V E
Sbjct: 61 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA---AETLLGMCLDVCEGMA 117
Query: 66 SL---GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY---YVAP 119
L V HRDL N L V E+ +K +DFG++ F D+ ++ G+ + + +P
Sbjct: 118 YLEEACVIHRDLAARNCL---VGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASP 173
Query: 120 EVLR-KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE 178
EV Y ++DVWS GV+++ + S EGKI +E+ + SE
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFS------------------EGKIPYENR---SNSE 212
Query: 179 SAKDLIRKMLDQNPKRRLT-AHEVLCHPWIVDDKVAPDKPLDSAVLSRL 226
+D+ P+ T ++++ H W ++P D SRL
Sbjct: 213 VVEDISTGFRLYKPRLASTHVYQIMNHCW-------KERPEDRPAFSRL 254
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 44/229 (19%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCH 65
H +V+++ +++ + +V E E G L D + ++G ++ A L+ + V E
Sbjct: 81 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA---AETLLGMCLDVCEGMA 137
Query: 66 SL---GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY---YVAP 119
L V HRDL N L V E+ +K +DFG++ F D+ ++ G+ + + +P
Sbjct: 138 YLEEACVIHRDLAARNCL---VGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASP 193
Query: 120 EVLR-KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE 178
EV Y ++DVWS GV+++ + S EGKI +E+ + SE
Sbjct: 194 EVFSFSRYSSKSDVWSFGVLMWEVFS------------------EGKIPYENR---SNSE 232
Query: 179 SAKDLIRKMLDQNPKRRLT-AHEVLCHPWIVDDKVAPDKPLDSAVLSRL 226
+D+ P+ T ++++ H W ++P D SRL
Sbjct: 233 VVEDISTGFRLYKPRLASTHVYQIMNHCW-------KERPEDRPAFSRL 274
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 15/151 (9%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIV---KKGNYSEREAAKLMKTIVGVVE 62
+H+++V + D + +V G L DR+ S K+ + +
Sbjct: 88 QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 147
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSD------VVGSPYY 116
H HRD+K N L +DE K +DFGL+ + E F+ +VG+ Y
Sbjct: 148 FLHENHHIHRDIKSANIL---LDEAFTAKISDFGLA---RASEKFAQTVMXXRIVGTTAY 201
Query: 117 VAPEVLRKHYGPEADVWSAGVILYILLSGVP 147
+APE LR P++D++S GV+L +++G+P
Sbjct: 202 MAPEALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 15/151 (9%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIV---KKGNYSEREAAKLMKTIVGVVE 62
+H+++V + D + +V G L DR+ S K+ + +
Sbjct: 82 QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 141
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSD------VVGSPYY 116
H HRD+K N L +DE K +DFGL+ + E F+ +VG+ Y
Sbjct: 142 FLHENHHIHRDIKSANIL---LDEAFTAKISDFGLA---RASEKFAQXVMXXRIVGTTAY 195
Query: 117 VAPEVLRKHYGPEADVWSAGVILYILLSGVP 147
+APE LR P++D++S GV+L +++G+P
Sbjct: 196 MAPEALRGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 7/139 (5%)
Query: 241 RVIAERLNEEEIGGLKELFKM-IDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAAD 299
+ E+L EE+ K F + + G+I+ EL ++ +G E+++++D D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 300 IDNSGTIDYGEFLAATLHL----NKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG 355
D SGT+D+ EFL + +K + EE L F FDK+A GYI +DEL+ + G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATG 125
Query: 356 --ISELHLDDMIKEIDQDD 372
I+E +++++K+ D+++
Sbjct: 126 ETITEDDIEELMKDGDKNN 144
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L +LF+M D + G I DELK L+ G + E +I++LM D +N G IDY E L
Sbjct: 97 LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXL 154
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 44/229 (19%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCH 65
H +V+++ +++ + +V E E G L D + ++G ++ A L+ + V E
Sbjct: 64 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA---AETLLGMCLDVCEGMA 120
Query: 66 SL---GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY---YVAP 119
L V HRDL N L V E+ +K +DFG++ F D+ ++ G+ + + +P
Sbjct: 121 YLEEACVIHRDLAARNCL---VGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASP 176
Query: 120 EVLR-KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE 178
EV Y ++DVWS GV+++ + S EGKI +E+ + SE
Sbjct: 177 EVFSFSRYSSKSDVWSFGVLMWEVFS------------------EGKIPYENR---SNSE 215
Query: 179 SAKDLIRKMLDQNPKRRLT-AHEVLCHPWIVDDKVAPDKPLDSAVLSRL 226
+D+ P+ T ++++ H W ++P D SRL
Sbjct: 216 VVEDISTGFRLYKPRLASTHVYQIMNHCW-------RERPEDRPAFSRL 257
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 24/203 (11%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAA-KLMKTIVGVVECCH 65
H ++V+++ + +VME G+L+ R++ K + + +LM I +E
Sbjct: 82 HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 66 SLG--VFHRDLKPENFLFLSVDEDAAL--KATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
+ + HRDL+ N S+DE+A + K DF LS + S ++G+ ++APE
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS--QQSVHSVSGLLGNFQWMAPET 197
Query: 122 L---RKHYGPEADVWSAGVILYILLSGVPPF--WAETEIGIFRQILEGKIDFESEPWPNI 176
+ + Y +AD +S +ILY +L+G PF ++ +I I E + P I
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR------PTI 251
Query: 177 SESAKDLIRKMLD----QNPKRR 195
E +R +++ +PK+R
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKR 274
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 15/151 (9%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIV---KKGNYSEREAAKLMKTIVGVVE 62
+H+++V + D + +V G L DR+ S K+ + +
Sbjct: 79 QHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGIN 138
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVF------SDVVGSPYY 116
H HRD+K N L +DE K +DFGL+ + E F S +VG+ Y
Sbjct: 139 FLHENHHIHRDIKSANIL---LDEAFTAKISDFGLA---RASEKFAQXVXXSRIVGTTAY 192
Query: 117 VAPEVLRKHYGPEADVWSAGVILYILLSGVP 147
APE LR P++D++S GV+L +++G+P
Sbjct: 193 XAPEALRGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 60/258 (23%)
Query: 8 QHVVRIHDTYEDK--SCVHIVMELCEGGELFDRIVKKGNYSEREAAKLM------KTIVG 59
H++++ D + K + VH+VM GE ++KK Y R + + ++G
Sbjct: 86 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK--YEHRGIPLIYVKQISKQLLLG 143
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAAL---KATDFGLSVFYKPDEVFSDVVGSPYY 116
+ G+ H D+KPEN L VD L K D G + +Y DE +++ + + Y
Sbjct: 144 LDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--DEHYTNSIQTREY 201
Query: 117 VAPEV-LRKHYGPEADVWSAGVILYILLSG----------------------------VP 147
+PEV L +G AD+WS +++ L++G +P
Sbjct: 202 RSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELP 261
Query: 148 PFWAE---------TEIGIFRQILEGKI----DFESEPWPNISESAK---DLIRKMLDQN 191
+ G+ R I + K D +E + + AK D + ML +
Sbjct: 262 SYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLD 321
Query: 192 PKRRLTAHEVLCHPWIVD 209
P++R A ++ HPW+ D
Sbjct: 322 PRKRADAGGLVNHPWLKD 339
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 44/229 (19%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECCH 65
H +V+++ +++ + +V E E G L D + ++G ++ A L+ + V E
Sbjct: 62 HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFA---AETLLGMCLDVCEGMA 118
Query: 66 SL---GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY---YVAP 119
L V HRDL N L V E+ +K +DFG++ F D+ ++ G+ + + +P
Sbjct: 119 YLEEACVIHRDLAARNCL---VGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASP 174
Query: 120 EVLR-KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISE 178
EV Y ++DVWS GV+++ + S EGKI +E+ + SE
Sbjct: 175 EVFSFSRYSSKSDVWSFGVLMWEVFS------------------EGKIPYENR---SNSE 213
Query: 179 SAKDLIRKMLDQNPKRRLT-AHEVLCHPWIVDDKVAPDKPLDSAVLSRL 226
+D+ P+ T ++++ H W ++P D SRL
Sbjct: 214 VVEDISTGFRLYKPRLASTHVYQIMNHCW-------RERPEDRPAFSRL 255
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 60/258 (23%)
Query: 8 QHVVRIHDTYEDK--SCVHIVMELCEGGELFDRIVKKGNYSEREAAKLM------KTIVG 59
H++++ D + K + VH+VM GE ++KK Y R + + ++G
Sbjct: 86 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK--YEHRGIPLIYVKQISKQLLLG 143
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAAL---KATDFGLSVFYKPDEVFSDVVGSPYY 116
+ G+ H D+KPEN L VD L K D G + +Y DE +++ + + Y
Sbjct: 144 LDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--DEHYTNSIQTREY 201
Query: 117 VAPEV-LRKHYGPEADVWSAGVILYILLSG----------------------------VP 147
+PEV L +G AD+WS +++ L++G +P
Sbjct: 202 RSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELP 261
Query: 148 PFWAE---------TEIGIFRQILEGKI----DFESEPWPNISESAK---DLIRKMLDQN 191
+ G+ R I + K D +E + + AK D + ML +
Sbjct: 262 SYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLD 321
Query: 192 PKRRLTAHEVLCHPWIVD 209
P++R A ++ HPW+ D
Sbjct: 322 PRKRADAGGLVNHPWLKD 339
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
+ L EE+I KE F + D DN+G+I+ EL ++ +G E+E+ DLM+ D+D +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 304 GTIDYGEFLA 313
I++ EFLA
Sbjct: 61 HQIEFSEFLA 70
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 330 AFSFFDKDASGYITIDELQHACKEFGI--SELHLDDMIKEIDQD 371
AF+ FDKD +G I+ EL + G+ SE ++D++ EID D
Sbjct: 15 AFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVD 58
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 79/191 (41%), Gaps = 33/191 (17%)
Query: 46 SEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE 105
S + M I+ + H GV HRDL P N L L+ + D + DF L+ D
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNIL-LADNNDITI--CDFNLAREDTADA 188
Query: 106 VFSDVVGSPYYVAPEVLR--KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE 163
+ V +Y APE++ K + D+WSAG ++ + + F T +I+E
Sbjct: 189 NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVE 248
Query: 164 --GKIDFE-----SEP-----------------W----PNISESAKDLIRKMLDQNPKRR 195
G E S P W P A DLI KML+ NP+RR
Sbjct: 249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRR 308
Query: 196 LTAHEVLCHPW 206
++ + L HP+
Sbjct: 309 ISTEQALRHPY 319
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 88/223 (39%), Gaps = 60/223 (26%)
Query: 57 IVGVVECCHSLGVFHRDLKPENFLFLSVD----------------EDAALKATDFGLSVF 100
+ V+ H + H DLKPEN LF++ D + A++ DFG + F
Sbjct: 146 LCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF 205
Query: 101 YKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVILYILLSGVPPFWA---ETEIG 156
E S +V + +Y APEV L + DVWS G I++ G F +
Sbjct: 206 --DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLA 263
Query: 157 IFRQIL------------------EGKIDFE--SEPWPNISESAK--------------- 181
+ +IL G++D++ + + E+ K
Sbjct: 264 MMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQ 323
Query: 182 --DLIRKMLDQNPKRRLTAHEVLCHPWIVDDKV-APDKPLDSA 221
DLI ML+ P +RLT E L HP+ + P+K DS+
Sbjct: 324 LFDLIESMLEYEPAKRLTLGEALQHPFFARLRAEPPNKLWDSS 366
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 33/191 (17%)
Query: 46 SEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE 105
S + M I+ + H GV HRDL P N L L+ + D + DF L+ D
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNIL-LADNNDITI--CDFNLAREDTADA 188
Query: 106 VFSDVVGSPYYVAPEVLR--KHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE 163
+ V +Y APE++ K + D+WSAG ++ + + F T +I+E
Sbjct: 189 NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVE 248
Query: 164 ----GKI--------------------DFESEPW----PNISESAKDLIRKMLDQNPKRR 195
KI + + W P A DLI KML+ NP+RR
Sbjct: 249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRR 308
Query: 196 LTAHEVLCHPW 206
++ + L HP+
Sbjct: 309 ISTEQALRHPY 319
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 6 EHQHVVRIHDTYED----KSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVV 61
+H ++VR +D++E K C+ +V EL G L + + + + I+ +
Sbjct: 83 QHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGL 142
Query: 62 ECCHSLG--VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAP 119
+ H+ + HRDLK +N +F++ ++K D GL+ K V+G+P + AP
Sbjct: 143 QFLHTRTPPIIHRDLKCDN-IFIT-GPTGSVKIGDLGLATL-KRASFAKAVIGTPEFXAP 199
Query: 120 EVLRKHYGPEADVWSAG-VILYILLSGVPPFWAETEIGIFRQILEG--KIDFESEPWPNI 176
E + Y DV++ G L S P + I+R++ G F+ P +
Sbjct: 200 EXYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV 259
Query: 177 SESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDD 210
K++I + QN R + ++L H + ++
Sbjct: 260 ----KEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 91/246 (36%), Gaps = 84/246 (34%)
Query: 46 SEREAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGL-------- 97
S +E + M + ++ H G+ HRD+KP NFL+ + AL DFGL
Sbjct: 115 SFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYAL--VDFGLAQGTHDTK 172
Query: 98 ---------------------SVFYKPDEVFSDVVGSPYYVAPEVLRK--HYGPEADVWS 134
S+ + + G+P + APEVL K + D+WS
Sbjct: 173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWS 232
Query: 135 AGVILYILLSGVPPFW-AETEIGIFRQILEGKIDFES----------------------- 170
AGVI LLSG PF+ A ++ QI+ + E+
Sbjct: 233 AGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLR 292
Query: 171 ---------------------------EPWPNISESAKDLIRKMLDQNPKRRLTAHEVLC 203
E W + + A DL+ K+LD NP R+TA E L
Sbjct: 293 KLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALL 352
Query: 204 HPWIVD 209
HP+ D
Sbjct: 353 HPFFKD 358
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 76/139 (54%), Gaps = 7/139 (5%)
Query: 241 RVIAERLNEEEIGGLKELFKM-IDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAAD 299
+ E+L EE+ K F + + G+I+ EL ++ +G E+++++D D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 300 IDNSGTIDYGEFLAATLHL----NKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG 355
D SGT+D+ EFL + +K + EE L F FDK+A GYI ++EL+ + G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATG 125
Query: 356 --ISELHLDDMIKEIDQDD 372
I+E +++++K+ D+++
Sbjct: 126 ETITEDDIEELMKDGDKNN 144
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L +LF+M D + G I +ELK L+ G + E +I++LM D +N G IDY EFL
Sbjct: 97 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 76/139 (54%), Gaps = 7/139 (5%)
Query: 241 RVIAERLNEEEIGGLKELFKM-IDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAAD 299
+ E+L EE+ K F + + G+I+ EL ++ +G E+++++D D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 300 IDNSGTIDYGEFLAATLHL----NKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG 355
D SGT+D+ EFL + +K + EE L F +DK+A GYI +DEL+ + G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATG 125
Query: 356 --ISELHLDDMIKEIDQDD 372
I+E +++++K+ D+++
Sbjct: 126 ETITEDDIEELMKDGDKNN 144
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L +LF+M D + G I DELK L+ G + E +I++LM D +N G IDY EFL
Sbjct: 97 LSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 240 LRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDE----LKDGLKRVGSQLMESEIKDLM 295
+R++ + EE L+E+ +D D SGT+ FDE + +K E E+ DL
Sbjct: 45 MRMLGQNPTPEE---LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLF 101
Query: 296 DAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACK 352
D + G ID E + E+++ DK+ G I DE K
Sbjct: 102 RMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 7/139 (5%)
Query: 241 RVIAERLNEEEIGGLKELFKM-IDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAAD 299
+ E+L EE+ K F + + G I+ EL ++ +G E+++++D D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 300 IDNSGTIDYGEFLAATLHL----NKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG 355
D SGT+D+ EFL + +K + EE L F FDK+A GYI ++EL+ + G
Sbjct: 66 EDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATG 125
Query: 356 --ISELHLDDMIKEIDQDD 372
I+E +++++K+ D+++
Sbjct: 126 ETITEDDIEELMKDGDKNN 144
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L +LF+M D + G I +ELK L+ G + E +I++LM D +N G IDY EFL
Sbjct: 97 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 76/139 (54%), Gaps = 7/139 (5%)
Query: 241 RVIAERLNEEEIGGLKELFKM-IDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAAD 299
+ E+L EE+ K F + + G+I+ EL ++ +G E+++++D D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 300 IDNSGTIDYGEFLAATLHL----NKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG 355
D SGT+D+ EFL + +K + EE L F FDK+A GYI ++EL+ + G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG 125
Query: 356 --ISELHLDDMIKEIDQDD 372
I+E +++++K+ D+++
Sbjct: 126 ETITEDDIEELMKDGDKNN 144
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L +LF+M D + G I +ELK L+ G + E +I++LM D +N G IDY EFL
Sbjct: 97 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK-KGNYSEREAAKLMKTIVG 59
M +LS H+ +V+++ + + I+ E G L + + + + + ++ ++ K +
Sbjct: 57 MMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 115
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY---Y 116
+E S HRDL N L V++ +K +DFGLS + DE ++ VGS + +
Sbjct: 116 AMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRW 171
Query: 117 VAPEVLR-KHYGPEADVWSAGVILYILLS-GVPPF 149
PEVL + ++D+W+ GV+++ + S G P+
Sbjct: 172 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 206
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK-KGNYSEREAAKLMKTIVG 59
M +LS H+ +V+++ + + I+ E G L + + + + + ++ ++ K +
Sbjct: 53 MMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 111
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY---Y 116
+E S HRDL N L V++ +K +DFGLS + DE ++ VGS + +
Sbjct: 112 AMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRW 167
Query: 117 VAPEVLR-KHYGPEADVWSAGVILYILLS-GVPPF 149
PEVL + ++D+W+ GV+++ + S G P+
Sbjct: 168 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 202
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++ + V I+ E E G L D ++K G ++ + +++ I ++
Sbjct: 88 DHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKY 146
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
+ HRDL N L V+ + K +DFG+S + P+ ++ G P + AP
Sbjct: 147 LSDMSAVHRDLAARNIL---VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 203
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E + + + +DVWS G++++ ++S G P+W + + + I EG
Sbjct: 204 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 250
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK-KGNYSEREAAKLMKTIVG 59
M +LS H+ +V+++ + + I+ E G L + + + + + ++ ++ K +
Sbjct: 58 MMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 116
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY---Y 116
+E S HRDL N L V++ +K +DFGLS + DE ++ VGS + +
Sbjct: 117 AMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRW 172
Query: 117 VAPEVL-RKHYGPEADVWSAGVILYILLS-GVPPF 149
PEVL + ++D+W+ GV+++ + S G P+
Sbjct: 173 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK-KGNYSEREAAKLMKTIVG 59
M +LS H+ +V+++ + + I+ E G L + + + + + ++ ++ K +
Sbjct: 64 MMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 122
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY---Y 116
+E S HRDL N L V++ +K +DFGLS + DE ++ VGS + +
Sbjct: 123 AMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRW 178
Query: 117 VAPEVLR-KHYGPEADVWSAGVILYILLS-GVPPF 149
PEVL + ++D+W+ GV+++ + S G P+
Sbjct: 179 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 43/177 (24%)
Query: 7 HQHVVRIHDTYEDKSC-----VHIVMELCEGGELFDRIVKKGNY-SEREAAKLMKTIVGV 60
H HVV++ D K +++V+E+ + F ++ + Y +E L+ ++
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADSD--FKKLFRTPVYLTELHIKTLLYNLLVG 168
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGL--SVFYKPDEVFSDVVGSP---- 114
V+ HS G+ HRDLKP N L V++D ++K DFGL +V Y P+ S + SP
Sbjct: 169 VKYVHSAGILHRDLKPANCL---VNQDCSVKVCDFGLARTVDY-PENGNSQLPISPREDD 224
Query: 115 -----------------------YYVAPE--VLRKHYGPEADVWSAGVILYILLSGV 146
+Y APE +L+++Y DVWS G I LL+ +
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 170 SEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVA 213
+E +P S A L+++ML NP +R+T +E L HP+ + ++A
Sbjct: 363 AERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA 406
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK-KGNYSEREAAKLMKTIVG 59
M +LS H+ +V+++ + + I+ E G L + + + + + ++ ++ K +
Sbjct: 73 MMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 131
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY---Y 116
+E S HRDL N L V++ +K +DFGLS + DE ++ VGS + +
Sbjct: 132 AMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRW 187
Query: 117 VAPEVLR-KHYGPEADVWSAGVILYILLS-GVPPF 149
PEVL + ++D+W+ GV+++ + S G P+
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H ++V + IV E G L+ + K G + + + + V + +
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 66 SL-----GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSD-VVGSPYYVAP 119
L + HRDLK N L VD+ +K DFGLS + S G+P ++AP
Sbjct: 152 YLHNRNPPIVHRDLKSPNLL---VDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAP 208
Query: 120 EVLRKHYGPE-ADVWSAGVILYILLSGVPPF 149
EVLR E +DV+S GVIL+ L + P+
Sbjct: 209 EVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++ + V I+ E E G L D ++K G ++ + +++ I ++
Sbjct: 67 DHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKY 125
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
+ HRDL N L V+ + K +DFG+S + P+ ++ G P + AP
Sbjct: 126 LSDMSYVHRDLAARNIL---VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 182
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E + + + +DVWS G++++ ++S G P+W + + + I EG
Sbjct: 183 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 229
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L EE+ + E F + D +N G + + ELK +K +G +L + EI DL+D D + +
Sbjct: 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLM 76
Query: 307 DYGEF-LAATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDD 363
Y +F + + K + + + AF FD D +G I+I L+ KE G +++ L
Sbjct: 77 KYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRA 136
Query: 364 MIKEIDQD 371
MI+E D D
Sbjct: 137 MIEEFDLD 144
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 242 VIAER-LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADI 300
V+ E+ L + + +K F++ D D++G I+ L+ K +G L + E++ +++ D+
Sbjct: 84 VMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDL 143
Query: 301 DNSGTIDYGEFLA 313
D G I+ EF+A
Sbjct: 144 DGDGEINENEFIA 156
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVEC 63
+H +++ + V I+ E E G L D ++K G ++ + +++ I ++
Sbjct: 73 DHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKY 131
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYK--PDEVFSDVVGS-PY-YVAP 119
+ HRDL N L V+ + K +DFG+S + P+ ++ G P + AP
Sbjct: 132 LSDMSYVHRDLAARNIL---VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 188
Query: 120 EVLR-KHYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
E + + + +DVWS G++++ ++S G P+W + + + I EG
Sbjct: 189 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 235
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 289 SEIKDLMDAADIDNSGTIDYGEFLAATLH-LNKLEREENLLSAFSFFDKDASGYITIDEL 347
+E++D+++ D D +GTID+ EFL + + EE + AF FDKD +GYI+ EL
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
Query: 348 QHACKEFG 355
+H G
Sbjct: 61 RHVMTNLG 68
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVL--- 122
+L + HRD+KP N L +D +K DFG+S + G Y+APE +
Sbjct: 144 NLKIIHRDIKPSNIL---LDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPS 200
Query: 123 --RKHYGPEADVWSAGVILYILLSGVPPF--WAETEIGIFRQILEG-KIDFESEPWPNIS 177
R+ Y +DVWS G+ LY L +G P+ W + Q+++G + S
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGRFPYPKW-NSVFDQLTQVVKGDPPQLSNSEEREFS 259
Query: 178 ESAKDLIRKMLDQNPKRRLTAHEVLCHPWIV 208
S + + L ++ +R E+L HP+I+
Sbjct: 260 PSFINFVNLCLTKDESKRPKYKELLKHPFIL 290
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 22/200 (11%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREA-----AKLMKTIVGV 60
+H H+V++ + V I+MELC GEL ++ YS A A + T +
Sbjct: 66 DHPHIVKLIGVITENP-VWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAY 123
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGS-PY-YVA 118
+E S HRD+ N L S D +K DFGLS + + + G P ++A
Sbjct: 124 LE---SKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 177
Query: 119 PEVLR-KHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEGKIDFESEPW-PN 175
PE + + + +DVW GV ++ IL+ GV PF + +I G E P PN
Sbjct: 178 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERLPMPPN 233
Query: 176 ISESAKDLIRKMLDQNPKRR 195
+ L+ K +P RR
Sbjct: 234 CPPTLYSLMTKCWAYDPSRR 253
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 22/200 (11%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREA-----AKLMKTIVGV 60
+H H+V++ + V I+MELC GEL ++ YS A A + T +
Sbjct: 74 DHPHIVKLIGVITENP-VWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAY 131
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGS-PY-YVA 118
+E S HRD+ N L S D +K DFGLS + + + G P ++A
Sbjct: 132 LE---SKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 185
Query: 119 PEVLR-KHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEGKIDFESEPW-PN 175
PE + + + +DVW GV ++ IL+ GV PF + +I G E P PN
Sbjct: 186 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERLPMPPN 241
Query: 176 ISESAKDLIRKMLDQNPKRR 195
+ L+ K +P RR
Sbjct: 242 CPPTLYSLMTKCWAYDPSRR 261
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 22/200 (11%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREA-----AKLMKTIVGV 60
+H H+V++ + V I+MELC GEL ++ YS A A + T +
Sbjct: 71 DHPHIVKLIGVITENP-VWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAY 128
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGS-PY-YVA 118
+E S HRD+ N L S D +K DFGLS + + + G P ++A
Sbjct: 129 LE---SKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 182
Query: 119 PEVLR-KHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEGKIDFESEPW-PN 175
PE + + + +DVW GV ++ IL+ GV PF + +I G E P PN
Sbjct: 183 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERLPMPPN 238
Query: 176 ISESAKDLIRKMLDQNPKRR 195
+ L+ K +P RR
Sbjct: 239 CPPTLYSLMTKCWAYDPSRR 258
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 22/200 (11%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREA-----AKLMKTIVGV 60
+H H+V++ + V I+MELC GEL ++ YS A A + T +
Sbjct: 69 DHPHIVKLIGVITENP-VWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAY 126
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGS-PY-YVA 118
+E S HRD+ N L S D +K DFGLS + + + G P ++A
Sbjct: 127 LE---SKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 180
Query: 119 PEVLR-KHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEGKIDFESEPW-PN 175
PE + + + +DVW GV ++ IL+ GV PF + +I G E P PN
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERLPMPPN 236
Query: 176 ISESAKDLIRKMLDQNPKRR 195
+ L+ K +P RR
Sbjct: 237 CPPTLYSLMTKCWAYDPSRR 256
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 22/200 (11%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREA-----AKLMKTIVGV 60
+H H+V++ + V I+MELC GEL ++ YS A A + T +
Sbjct: 97 DHPHIVKLIGVITENP-VWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAY 154
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGS-PY-YVA 118
+E S HRD+ N L V + +K DFGLS + + + G P ++A
Sbjct: 155 LE---SKRFVHRDIAARNVL---VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 208
Query: 119 PEVLR-KHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEGKIDFESEPW-PN 175
PE + + + +DVW GV ++ IL+ GV PF + +I G E P PN
Sbjct: 209 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERLPMPPN 264
Query: 176 ISESAKDLIRKMLDQNPKRR 195
+ L+ K +P RR
Sbjct: 265 CPPTLYSLMTKCWAYDPSRR 284
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 22/200 (11%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREA-----AKLMKTIVGV 60
+H H+V++ + V I+MELC GEL ++ YS A A + T +
Sbjct: 69 DHPHIVKLIGVITENP-VWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAY 126
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGS-PY-YVA 118
+E S HRD+ N L S D +K DFGLS + + + G P ++A
Sbjct: 127 LE---SKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 180
Query: 119 PEVLR-KHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEGKIDFESEPW-PN 175
PE + + + +DVW GV ++ IL+ GV PF + +I G E P PN
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERLPMPPN 236
Query: 176 ISESAKDLIRKMLDQNPKRR 195
+ L+ K +P RR
Sbjct: 237 CPPTLYSLMTKCWAYDPSRR 256
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 22/200 (11%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREA-----AKLMKTIVGV 60
+H H+V++ + V I+MELC GEL ++ YS A A + T +
Sbjct: 72 DHPHIVKLIGVITENP-VWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAY 129
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGS-PY-YVA 118
+E S HRD+ N L S D +K DFGLS + + + G P ++A
Sbjct: 130 LE---SKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 183
Query: 119 PEVLR-KHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEGKIDFESEPW-PN 175
PE + + + +DVW GV ++ IL+ GV PF + +I G E P PN
Sbjct: 184 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERLPMPPN 239
Query: 176 ISESAKDLIRKMLDQNPKRR 195
+ L+ K +P RR
Sbjct: 240 CPPTLYSLMTKCWAYDPSRR 259
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 24/199 (12%)
Query: 7 HQHVVRI-----HDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVV 61
H +V+I H +IVME GG+ R K EA + I+ +
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYV-GGQSLKR-SKGQKLPVAEAIAYLLEILPAL 195
Query: 62 ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEV 121
HS+G+ + DLKPEN + + LK D G F + G+P + APE+
Sbjct: 196 SYLHSIGLVYNDLKPENIML----TEEQLKLIDLGAVSRIN---SFGYLYGTPGFQAPEI 248
Query: 122 LRKHYGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNISESAK 181
+R D+++ G L L +P T G + L E +P +S
Sbjct: 249 VRTGPTVATDIYTVGRTLAALTLDLP-----TRNGRYVDGLP-----EDDPVLKTYDSYG 298
Query: 182 DLIRKMLDQNPKRRLTAHE 200
L+R+ +D +P++R T E
Sbjct: 299 RLLRRAIDPDPRQRFTTAE 317
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 7/139 (5%)
Query: 241 RVIAERLNEEEIGGLKELFKM-IDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAAD 299
+ E+L EE+ K F + + G+I+ EL ++ +G E+++++D D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 300 IDNSGTIDYGEFLAATLHL----NKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG 355
D SGT+D+ EFL + +K + EE L F DK+A GYI +DEL+ + G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATG 125
Query: 356 --ISELHLDDMIKEIDQDD 372
I+E +++++K+ D+++
Sbjct: 126 ETITEDDIEELMKDGDKNN 144
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L +LF+M D + G I DELK L+ G + E +I++LM D +N G IDY EFL
Sbjct: 97 LSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 240 LRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDE----LKDGLKRVGSQLMESEIKDLM 295
+R++ + EE L+E+ +D D SGT+ FDE + +K E E+ DL
Sbjct: 45 MRMLGQNPTPEE---LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLF 101
Query: 296 DAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACK 352
D + G ID E + E+++ DK+ G I DE K
Sbjct: 102 RMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 14/196 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECC 64
+H H+V++ + V I+MELC GEL + V+K + + +
Sbjct: 449 DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL 507
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGS-PY-YVAPEVL 122
S HRD+ N L + D +K DFGLS + + + G P ++APE +
Sbjct: 508 ESKRFVHRDIAARNVLVSATD---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 564
Query: 123 R-KHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEGKIDFESEPW-PNISES 179
+ + +DVW GV ++ IL+ GV PF + +I G E P PN +
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERLPMPPNCPPT 620
Query: 180 AKDLIRKMLDQNPKRR 195
L+ K +P RR
Sbjct: 621 LYSLMTKCWAYDPSRR 636
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 14/196 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECC 64
+H H+V++ + V I+MELC GEL + V+K + + +
Sbjct: 69 DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL 127
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGS-PY-YVAPEVL 122
S HRD+ N L + D +K DFGLS + + + G P ++APE +
Sbjct: 128 ESKRFVHRDIAARNVLVSATD---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 123 R-KHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEGKIDFESEPW-PNISES 179
+ + +DVW GV ++ IL+ GV PF + +I G E P PN +
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERLPMPPNCPPT 240
Query: 180 AKDLIRKMLDQNPKRR 195
L+ K +P RR
Sbjct: 241 LYSLMTKCWAYDPSRR 256
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L EE+ ++E F + DTD SGTI ELK ++ +G + + EIK ++ D D SGTI
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 83
Query: 307 DYGEFLA 313
D+ EFL
Sbjct: 84 DFEEFLT 90
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 281 RVG-SQLMESEIKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDAS 339
RVG ++ + EI++ D D D SGTID E A L ++E + S DKD S
Sbjct: 21 RVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGS 80
Query: 340 GYITIDEL 347
G I +E
Sbjct: 81 GTIDFEEF 88
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 6 EHQHVVR-IHDTYEDKSCVHIVMELCEGGELFDRIVKK--GNYSEREAAKLMKTIVGVVE 62
EH +V++ I Y+DK ++ + E +GG L I+K Y + K I +
Sbjct: 65 EHPNVLKFIGVLYKDKR-LNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFAKDIASGMA 122
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFY--------------KPD-EVF 107
HS+ + HRDL N L V E+ + DFGL+ KPD +
Sbjct: 123 YLHSMNIIHRDLNSHNCL---VRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKR 179
Query: 108 SDVVGSPYYVAPEVLR-KHYGPEADVWSAGVILYILLSGV 146
VVG+PY++APE++ + Y + DV+S G++L ++ V
Sbjct: 180 YTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRV 219
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 14/196 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECC 64
+H H+V++ + V I+MELC GEL + V+K + + +
Sbjct: 449 DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL 507
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGS-PY-YVAPEVL 122
S HRD+ N L S D +K DFGLS + + + G P ++APE +
Sbjct: 508 ESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 564
Query: 123 R-KHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEGKIDFESEPW-PNISES 179
+ + +DVW GV ++ IL+ GV PF + +I G E P PN +
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERLPMPPNCPPT 620
Query: 180 AKDLIRKMLDQNPKRR 195
L+ K +P RR
Sbjct: 621 LYSLMTKCWAYDPSRR 636
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 249 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDY 308
++++ KE F++ D++ +G IT + L+ LK+ G ++ + ++ + AD +G I +
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 309 GEFLAATLHLNKLEREENLL-SAFSFFDKDASGYITIDELQHACKEFGISELHLDDMIK 366
EFL+ K E++L AF FD + +GYI LQ A L+L D +K
Sbjct: 62 PEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDAL-------LNLGDRLK 113
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 330 AFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEID 369
AF FD + +G+IT + LQ K+FG + ++M E D
Sbjct: 11 AFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEAD 52
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Query: 53 LMKTIVGVVECCHSLGVFHRDLKPENFLFLS-VDEDAALKATDFGLS-VFYKPDEVFSD- 109
L+ I+ + H+ V HRDLKP N L + E +K D G + +F P + +D
Sbjct: 133 LLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL 192
Query: 110 --VVGSPYYVAPEVL--RKHYGPEADVWSAGVILYILLSGVPPFWAETE 154
VV + +Y APE+L +HY D+W+ G I LL+ P F E
Sbjct: 193 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
H ++V + IV E G L+ + K G + + + + V + +
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 66 SL-----GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFS-DVVGSPYYVAP 119
L + HR+LK N L VD+ +K DFGLS + S G+P ++AP
Sbjct: 152 YLHNRNPPIVHRNLKSPNLL---VDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAP 208
Query: 120 EVLRKHYGPE-ADVWSAGVILYILLSGVPPF 149
EVLR E +DV+S GVIL+ L + P+
Sbjct: 209 EVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 11/155 (7%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK-KGNYSEREAAKLMKTIVG 59
M +LS H+ +V+++ + + I+ E G L + + + + + ++ ++ K +
Sbjct: 73 MMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 131
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY---Y 116
+E S HRDL N L V++ +K +DFGLS + DE S VGS + +
Sbjct: 132 AMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLDDEETSS-VGSKFPVRW 187
Query: 117 VAPEVLR-KHYGPEADVWSAGVILYILLS-GVPPF 149
PEVL + ++D+W+ GV+++ + S G P+
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 39/227 (17%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK----GNYSEREAAKLMKTIVG 59
L +H HVVR + + + I E C GG L D I + + E E L+ +
Sbjct: 63 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 122
Query: 60 VVECCHSLGVFHRDLKPENFLFLSV------------DEDAALKATDFGLSVFYKPDEVF 107
+ HS+ + H D+KP N +F+S ++D A F + +
Sbjct: 123 GLRYIHSMSLVHMDIKPSN-IFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 181
Query: 108 SDVV--GSPYYVAPEVLRKHYG--PEADVWSAGVILYILLSGVPPF------WAETEIGI 157
S V G ++A EVL+++Y P+AD+++ + + + +G P W E G
Sbjct: 182 SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV-VXAAGAEPLPRNGDQWHEIRQGR 240
Query: 158 FRQILEGKIDFESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCH 204
+I + +S+ +L++ M+ +P+RR +A ++ H
Sbjct: 241 LPRIPQ-----------VLSQEFTELLKVMIHPDPERRPSAMALVKH 276
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK----GNYSEREAAKLMKTIVG 59
L +H HVVR + + + I E C GG L D I + + E E L+ +
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 60 VVECCHSLGVFHRDLKPENFLFLSV------------DEDAALKATDFGLSVFYKPDEVF 107
+ HS+ + H D+KP N +F+S ++D A F + +
Sbjct: 125 GLRYIHSMSLVHMDIKPSN-IFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 183
Query: 108 SDVV--GSPYYVAPEVLRKHYG--PEADVWSAGVILYILLSGVPPF------WAETEIGI 157
S V G ++A EVL+++Y P+AD+++ + + + +G P W E G
Sbjct: 184 SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGR 242
Query: 158 FRQILEGKIDFESEPWPNI-SESAKDLIRKMLDQNPKRRLTAHEVLCH 204
+I P + S+ +L++ M+ +P+RR +A ++ H
Sbjct: 243 LPRI------------PQVLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 79/155 (50%), Gaps = 11/155 (7%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK-KGNYSEREAAKLMKTIVG 59
M +LS H+ +V+++ + + I+ E G L + + + + + ++ ++ K +
Sbjct: 58 MMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 116
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY---Y 116
+E S HRDL N L V++ +K +DFGLS + DE ++ GS + +
Sbjct: 117 AMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLDDE-YTSSRGSKFPVRW 172
Query: 117 VAPEVL-RKHYGPEADVWSAGVILYILLS-GVPPF 149
PEVL + ++D+W+ GV+++ + S G P+
Sbjct: 173 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK----GNYSEREAAKLMKTIVG 59
L +H HVVR + + + I E C GG L D I + + E E L+ +
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 60 VVECCHSLGVFHRDLKPENFLFLSV------------DEDAALKATDFGLSVFYKPDEVF 107
+ HS+ + H D+KP N +F+S ++D A F + +
Sbjct: 125 GLRYIHSMSLVHMDIKPSN-IFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 183
Query: 108 SDVV--GSPYYVAPEVLRKHYG--PEADVWSAGVILYILLSGVPPF------WAETEIGI 157
S V G ++A EVL+++Y P+AD+++ + + + +G P W E G
Sbjct: 184 SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGR 242
Query: 158 FRQILEGKIDFESEPWPNI-SESAKDLIRKMLDQNPKRRLTAHEVLCH 204
+I P + S+ +L++ M+ +P+RR +A ++ H
Sbjct: 243 LPRI------------PQVLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKK----GNYSEREAAKLMKTIVG 59
L +H HVVR + + + I E C GG L D I + + E E L+ +
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 60 VVECCHSLGVFHRDLKPENFLFLSV------------DEDAALKATDFGLSVFYKPDEVF 107
+ HS+ + H D+KP N +F+S ++D A F + +
Sbjct: 127 GLRYIHSMSLVHMDIKPSN-IFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 185
Query: 108 SDVV--GSPYYVAPEVLRKHYG--PEADVWSAGVILYILLSGVPPF------WAETEIGI 157
S V G ++A EVL+++Y P+AD+++ + + + +G P W E G
Sbjct: 186 SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGR 244
Query: 158 FRQILEGKIDFESEPWPNI-SESAKDLIRKMLDQNPKRRLTAHEVLCH 204
+I P + S+ +L++ M+ +P+RR +A ++ H
Sbjct: 245 LPRI------------PQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 7 HQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVEC--- 63
H +V+ + + ++IV E G L + + G E ++L++ V E
Sbjct: 62 HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGK--GLEPSQLLEMCYDVCEGMAF 119
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY---YVAPE 120
S HRDL N L VD D +K +DFG++ + D+ S VG+ + + APE
Sbjct: 120 LESHQFIHRDLAARNCL---VDRDLCVKVSDFGMTRYVLDDQYVSS-VGTKFPVKWSAPE 175
Query: 121 VLRK-HYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEGKIDFESEPWPNI-S 177
V Y ++DVW+ G++++ + S G P+ T + ++ +G + P++ S
Sbjct: 176 VFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYR----PHLAS 231
Query: 178 ESAKDLIRKMLDQNPKRRLTAHEVL 202
++ ++ + P++R T ++L
Sbjct: 232 DTIYQIMYSCWHELPEKRPTFQQLL 256
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 6 EHQHVVRIHDT-YEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ E+K ++IV E G L D + +G S L+K + V E
Sbjct: 72 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAM 130
Query: 65 HSL---GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY-YVAPE 120
L HRDL N L V ED K +DFGL+ K D P + APE
Sbjct: 131 EYLEGNNFVHRDLAARNVL---VSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPE 184
Query: 121 VLR-KHYGPEADVWSAGVILYILLS-GVPPF 149
LR K + ++DVWS G++L+ + S G P+
Sbjct: 185 ALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 6 EHQHVVRIHDT-YEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ E+K ++IV E G L D + +G S L+K + V E
Sbjct: 57 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAM 115
Query: 65 HSL---GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY-YVAPE 120
L HRDL N L V ED K +DFGL+ K D P + APE
Sbjct: 116 EYLEGNNFVHRDLAARNVL---VSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPE 169
Query: 121 VLR-KHYGPEADVWSAGVILYILLS-GVPPF 149
LR K + ++DVWS G++L+ + S G P+
Sbjct: 170 ALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 14/196 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRI-VKKGNYSEREAAKLMKTIVGVVECC 64
+H H+V++ + V I+MELC GEL + V+K + + +
Sbjct: 69 DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL 127
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGS-PY-YVAPEVL 122
S HRD+ N L S D +K DFGLS + + G P ++APE +
Sbjct: 128 ESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESI 184
Query: 123 R-KHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEGKIDFESEPW-PNISES 179
+ + +DVW GV ++ IL+ GV PF + +I G E P PN +
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERLPMPPNCPPT 240
Query: 180 AKDLIRKMLDQNPKRR 195
L+ K +P RR
Sbjct: 241 LYSLMTKCWAYDPSRR 256
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 222 VLSRLKHFSAMNKLKKMALRVIAERLN--EEEIGGLKELFKMIDTDNSGTITFDELKDGL 279
VL+ +K + + ++ + + ++A L+ I + ELF +DT+++G+++ E+ L
Sbjct: 6 VLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVL 65
Query: 280 KRVGSQLMESEIKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDAS 339
VG + + +I ++ A DI++ G I Y EF+A +E L +AF+ DKD
Sbjct: 66 ASVG--IKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIESTF-LKAAFNKIDKDED 122
Query: 340 GYITIDELQHACKEFGISELHLDDMIKEIDQDDVSIFF 377
GYI+ ++ +S +H K +D +D+ FF
Sbjct: 123 GYISKSDI--------VSLVH----DKVLDNNDIDNFF 148
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 18 EDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCHSL---GVFHRDL 74
E+K ++IV E G L D + +G S L+K + V E L HRDL
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL 315
Query: 75 KPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY-YVAPEVLR-KHYGPEADV 132
N L V ED K +DFGL+ K D P + APE LR K + ++DV
Sbjct: 316 AARNVL---VSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKFSTKSDV 369
Query: 133 WSAGVILYILLS-GVPPF 149
WS G++L+ + S G P+
Sbjct: 370 WSFGILLWEIYSFGRVPY 387
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 245 ERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSG 304
E L+E E LKE F+++D + G I D L+ LK +G +L E EI++++ D D SG
Sbjct: 2 EDLDERE---LKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSG 58
Query: 305 TIDYGEF 311
T+DY EF
Sbjct: 59 TVDYEEF 65
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH- 125
L + H DLKPEN L L + +A+K DFG S + + + S +Y +PEVL
Sbjct: 178 LSIIHCDLKPENIL-LCNPKRSAIKIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMP 234
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE 163
Y D+WS G IL + +G P F E+ +I+E
Sbjct: 235 YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 272
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH- 125
L + H DLKPEN L L + +A+K DFG S + + + S +Y +PEVL
Sbjct: 159 LSIIHCDLKPENIL-LCNPKRSAIKIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMP 215
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE 163
Y D+WS G IL + +G P F E+ +I+E
Sbjct: 216 YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 253
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A+ L+EE+I KE F + D D G IT +EL ++ + E E++D++ D D +
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 304 GTIDYGEFLA 313
GTI++ EFL+
Sbjct: 61 GTIEFDEFLS 70
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 330 AFSFFDKDASGYITIDELQHACKEF--GISELHLDDMIKEIDQD 371
AF FDKD G IT++EL + +E L DMI E+D D
Sbjct: 15 AFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDAD 58
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 67 LGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYYVAPEVLRKH- 125
L + H DLKPEN L L + A+K DFG S + + + S +Y +PEVL
Sbjct: 178 LSIIHCDLKPENIL-LCNPKRXAIKIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMP 234
Query: 126 YGPEADVWSAGVILYILLSGVPPFWAETEIGIFRQILE 163
Y D+WS G IL + +G P F E+ +I+E
Sbjct: 235 YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 272
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
A+ L+EE+I KE F + D D G IT +EL ++ + E E++D++ D D +
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 304 GTIDYGEFLA 313
GTI++ EFL+
Sbjct: 61 GTIEFDEFLS 70
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 330 AFSFFDKDASGYITIDELQHACKEF--GISELHLDDMIKEIDQD 371
AF FDKD G IT++EL + +E L DMI E+D D
Sbjct: 15 AFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDAD 58
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 29/154 (18%)
Query: 7 HQHVVRIHDTYEDKS--CVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H+H+++ ED+ + +VME G L D Y R + L + ++ + C
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRD-------YLPRHSIGLAQLLLFAQQIC 127
Query: 65 ------HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-------FYKPDEVFSDVV 111
HS HR+L N L +D D +K DFGL+ +Y+ V D
Sbjct: 128 EGMAYLHSQHYIHRNLAARNVL---LDNDRLVKIGDFGLAKAVPEGHEYYR---VREDGD 181
Query: 112 GSPYYVAPEVLRKH-YGPEADVWSAGVILYILLS 144
++ APE L+++ + +DVWS GV LY LL+
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 249 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDY 308
EE+ + E F + D +N G + + ELK K +G +L + EI DL+D D + Y
Sbjct: 19 EEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKY 78
Query: 309 GEF-LAATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMI 365
+F + + K + + + AF FD D +G I+I L+ KE G +++ L I
Sbjct: 79 DDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXI 138
Query: 366 KEIDQD 371
+E D D
Sbjct: 139 EEFDLD 144
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFLA 313
+K F++ D D++G I+ L+ K +G L + E++ ++ D+D G I+ EF+A
Sbjct: 98 IKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEFIA 156
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 246 RLNEEEIGGLKELFKMIDT-DNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSG 304
+L+ ++ L+ F+ +T + SG ++ D++ L+ +G Q +S I+ L+D D +G
Sbjct: 6 KLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNG 65
Query: 305 TIDYGEF--LAATL---HLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEF--GIS 357
ID+ F + A +N + ++ L AF +DK+ +GYI+ D ++ E +S
Sbjct: 66 DIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLS 125
Query: 358 ELHLDDMIKEIDQD 371
LD MI EID D
Sbjct: 126 SEDLDAMIDEIDAD 139
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 233 NKLKKMALRVIAERLNEEEIGG-LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEI 291
+ K + R + E +N E++ L+E F++ D + +G I+ D +++ L + L ++
Sbjct: 70 DSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDL 129
Query: 292 KDLMDAADIDNSGTIDYGEFLA 313
++D D D SGT+D+ EF+
Sbjct: 130 DAMIDEIDADGSGTVDFEEFMG 151
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 6 EHQHVVRIHDT-YEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H ++V++ E+K ++IV E G L D + +G S L+K + V E
Sbjct: 63 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAM 121
Query: 65 HSL---GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY-YVAPE 120
L HRDL N L V ED K +DFGL+ K D P + APE
Sbjct: 122 EYLEGNNFVHRDLAARNVL---VSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPE 175
Query: 121 VLRKH-YGPEADVWSAGVILYILLS-GVPPF 149
LR+ + ++DVWS G++L+ + S G P+
Sbjct: 176 ALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 80/210 (38%), Gaps = 65/210 (30%)
Query: 62 ECCHSLGVFHR------DLKPENFLFLSVD----------------EDAALKATDFGLSV 99
+ CH+L H DLKPEN LF++ + ++ +++ DFG +
Sbjct: 163 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 222
Query: 100 FYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVILYILLSGVPPFWA--ETEIG 156
F E + +V + +Y PEV L + DVWS G IL+ G F E
Sbjct: 223 F--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 280
Query: 157 IFRQILEGKI---------------------DFESEPWPNISESAK-------------- 181
+ + + G I D S + E+ K
Sbjct: 281 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 340
Query: 182 ---DLIRKMLDQNPKRRLTAHEVLCHPWIV 208
DL+R+ML+ +P +R+T E L HP+
Sbjct: 341 QLFDLMRRMLEFDPAQRITLAEALLHPFFA 370
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 23/151 (15%)
Query: 7 HQHVVRIHDTYEDK--SCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H+H+++ ED + + +VME G L D Y R + L + ++ + C
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRD-------YLPRHSIGLAQLLLFAQQIC 144
Query: 65 ------HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVF----YKPDEVFSDVVGSP 114
H+ HRDL N L +D D +K DFGL+ ++ V D
Sbjct: 145 EGMAYLHAQHYIHRDLAARNVL---LDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV 201
Query: 115 YYVAPEVLRKH-YGPEADVWSAGVILYILLS 144
++ APE L+++ + +DVWS GV LY LL+
Sbjct: 202 FWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 80/210 (38%), Gaps = 65/210 (30%)
Query: 62 ECCHSLGVFHR------DLKPENFLFLSVD----------------EDAALKATDFGLSV 99
+ CH+L H DLKPEN LF++ + ++ +++ DFG +
Sbjct: 140 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 199
Query: 100 FYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVILYILLSGVPPFWA--ETEIG 156
F E + +V + +Y PEV L + DVWS G IL+ G F E
Sbjct: 200 F--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
Query: 157 IFRQILEGKI---------------------DFESEPWPNISESAK-------------- 181
+ + + G I D S + E+ K
Sbjct: 258 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 317
Query: 182 ---DLIRKMLDQNPKRRLTAHEVLCHPWIV 208
DL+R+ML+ +P +R+T E L HP+
Sbjct: 318 QLFDLMRRMLEFDPAQRITLAEALLHPFFA 347
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 80/210 (38%), Gaps = 65/210 (30%)
Query: 62 ECCHSLGVFHR------DLKPENFLFLSVD----------------EDAALKATDFGLSV 99
+ CH+L H DLKPEN LF++ + ++ +++ DFG +
Sbjct: 131 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 190
Query: 100 FYKPDEVFSDVVGSPYYVAPEV-LRKHYGPEADVWSAGVILYILLSGVPPFWA--ETEIG 156
F E + +V + +Y PEV L + DVWS G IL+ G F E
Sbjct: 191 F--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
Query: 157 IFRQILEGKI---------------------DFESEPWPNISESAK-------------- 181
+ + + G I D S + E+ K
Sbjct: 249 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 308
Query: 182 ---DLIRKMLDQNPKRRLTAHEVLCHPWIV 208
DL+R+ML+ +P +R+T E L HP+
Sbjct: 309 QLFDLMRRMLEFDPAQRITLAEALLHPFFA 338
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L +LF+M D + G I DELK L+ G + E +I++LM D +N G IDY EFL
Sbjct: 8 LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 65
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 324 EENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQDD 372
EE L F FDK+A GYI +DEL+ + G I+E +++++K+ D+++
Sbjct: 5 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 55
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 29/154 (18%)
Query: 7 HQHVVRIHDTYEDKS--CVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H+H+++ ED+ + +VME G L D Y R + L + ++ + C
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRD-------YLPRHSIGLAQLLLFAQQIC 127
Query: 65 ------HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-------FYKPDEVFSDVV 111
H+ HR+L N L +D D +K DFGL+ +Y+ V D
Sbjct: 128 EGMAYLHAQHYIHRNLAARNVL---LDNDRLVKIGDFGLAKAVPEGHEYYR---VREDGD 181
Query: 112 GSPYYVAPEVLRKH-YGPEADVWSAGVILYILLS 144
++ APE L+++ + +DVWS GV LY LL+
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
++ +EI L + FK +D DNSG+++ +E + + L++ ++D D D +G +
Sbjct: 1 MDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQR----VIDIFDTDGNGEV 56
Query: 307 DYGEFLAATLHLN-KLEREENLLSAFSFFDKDASGYITIDELQHACK 352
D+ EF+ + K ++E+ L AF +D D GYI+ EL K
Sbjct: 57 DFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLK 103
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
+ +EI L + FK +D DNSG+++ +E + + L++ ++D D D +G +
Sbjct: 14 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQR----VIDIFDTDGNGEV 69
Query: 307 DYGEFLAATLHLN-KLEREENLLSAFSFFDKDASGYITIDELQHACK 352
D+ EF+ + K ++E+ L AF +D D GYI+ EL K
Sbjct: 70 DFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLK 116
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGS---QLMESEIKDLMDAADIDNSGTIDYGEF 311
+K++F+ ID D SG + DELK L++ S +L ESE K LMDAAD D G I EF
Sbjct: 43 VKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEF 102
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+ + +EI L + FK +D DNSG+++ +E + + L++ ++D D D
Sbjct: 11 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQR----VIDIFDTDG 66
Query: 303 SGTIDYGEFLAATLHLN-KLEREENLLSAFSFFDKDASGYITIDELQHACK 352
+G +D+ EF+ + K ++E+ L AF +D D GYI+ EL K
Sbjct: 67 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLK 117
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 246 RLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGT 305
+L++ ++ LKE F MID D G I ++LKD +G + E+ ++ G
Sbjct: 9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQ 64
Query: 306 IDYGEFLAATLHLNKL---EREENLLSAFSFFDKDASGYITIDELQHACKEFG 355
+++ FL TL K+ + E+ L +AFS FD+D G+I D L+ + G
Sbjct: 65 LNFTAFL--TLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMG 115
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 254 GLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
L+ F M D D G I D LKD L+ +G + EIK++ A + N
Sbjct: 86 ALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLKN 134
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 250 EEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYG 309
+EI L + FK +D DNSG+++ +E + + L++ ++D D D +G +D+
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQR----VIDIFDTDGNGEVDFK 58
Query: 310 EFLAATLHLN-KLEREENLLSAFSFFDKDASGYITIDELQHACK 352
EF+ + K ++E+ L AF +D D GYI+ EL K
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLK 102
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L EE+ ++E F + D D +GTI ELK ++ +G + + EIK ++ D + +G +
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKM 84
Query: 307 DYGEFL 312
++G+FL
Sbjct: 85 NFGDFL 90
Score = 30.4 bits (67), Expect = 1.8, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 288 ESEIKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDASG 340
+ EI++ D D D +GTID E A L ++E + S DK+ +G
Sbjct: 30 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTG 82
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 7 HQHVVRIHDTYEDKS--CVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H+H+V+ ED+ V +VME G L D Y R L + ++ + C
Sbjct: 70 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRD-------YLPRHCVGLAQLLLFAQQIC 122
Query: 65 ------HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-------FYKPDEVFSDVV 111
H+ HR L N L +D D +K DFGL+ +Y+ V D
Sbjct: 123 EGMAYLHAQHYIHRALAARNVL---LDNDRLVKIGDFGLAKAVPEGHEYYR---VREDGD 176
Query: 112 GSPYYVAPEVLRK-HYGPEADVWSAGVILYILLS 144
++ APE L++ + +DVWS GV LY LL+
Sbjct: 177 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 7 HQHVVRIHDTYEDKS--CVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECC 64
H+H+V+ ED+ V +VME G L D Y R L + ++ + C
Sbjct: 69 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRD-------YLPRHCVGLAQLLLFAQQIC 121
Query: 65 ------HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-------FYKPDEVFSDVV 111
H+ HR L N L +D D +K DFGL+ +Y+ V D
Sbjct: 122 EGMAYLHAQHYIHRALAARNVL---LDNDRLVKIGDFGLAKAVPEGHEYYR---VREDGD 175
Query: 112 GSPYYVAPEVLRK-HYGPEADVWSAGVILYILLS 144
++ APE L++ + +DVWS GV LY LL+
Sbjct: 176 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGEL--FDRIVKKG--NYSEREAAKLMKTIVGVVECC 64
HVVR+ +VMEL G+L + R ++ N R L + I E
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 65 HSLGVF------HRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVG--SPY 115
+ HRDL N + V D +K DFG++ Y+ D G
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCM---VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 116 YVAPEVLRKH-YGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEGKIDFESEPW 173
++APE L+ + +D+WS GV+L+ + S P+ + + + +++G + +P
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GYLDQP- 254
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKP 217
N E DL+R NPK R T E++ ++ D + P P
Sbjct: 255 DNCPERVTDLMRMCWQFNPKMRPTFLEIVN---LLKDDLHPSFP 295
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGEL--FDRIVKKG--NYSEREAAKLMKTIVGVVECC 64
HVVR+ +VMEL G+L + R ++ N R L + I E
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 65 HSLGVF------HRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVG--SPY 115
+ HRDL N + V D +K DFG++ Y+ D G
Sbjct: 140 DGMAYLNAKKFVHRDLAARNCM---VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 116 YVAPEVLRKH-YGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEGKIDFESEPW 173
++APE L+ + +D+WS GV+L+ + S P+ + + + +++G + +P
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GYLDQP- 253
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKP 217
N E DL+R NPK R T E++ ++ D + P P
Sbjct: 254 DNCPERVTDLMRMCWQFNPKMRPTFLEIVN---LLKDDLHPSFP 294
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
++ +I KE F MID + G I ++L D L +G + ++ +M A G I
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEA----PGPI 56
Query: 307 DYGEFLAA-TLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDD 363
++ FL LN + E+ + +AF+ FD++ASG+I D L+ G ++ +D+
Sbjct: 57 NFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDE 116
Query: 364 MIKE 367
M +E
Sbjct: 117 MYRE 120
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 95/233 (40%), Gaps = 42/233 (18%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGEL--FDRIVKKG--NYSEREAAKLMKTIVGVVECC 64
HVVR+ +VMEL G+L + R ++ N R L + I E
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 65 HSLGVF------HRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYY-- 116
+ HRDL N + V D +K DFG++ D+ + YY
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCM---VAHDFTVKIGDFGMT---------RDIYETAYYRK 188
Query: 117 ----------VAPEVLRKH-YGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEG 164
+APE L+ + +D+WS GV+L+ + S P+ + + + +++G
Sbjct: 189 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG 248
Query: 165 KIDFESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKP 217
+ +P N E DL+R NPK R T E++ ++ D + P P
Sbjct: 249 --GYLDQP-DNCPERVTDLMRMCWQFNPKMRPTFLEIVN---LLKDDLHPSFP 295
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L +LF+M D + G I +ELK L+ G + E +I++LM D +N G IDY EFL
Sbjct: 7 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 64
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 324 EENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQDD 372
EE L F FDK+A GYI ++EL+ + G I+E +++++K+ D+++
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 54
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L +LF+M D + G I +ELK L+ G + E +I++LM D +N G IDY EFL
Sbjct: 17 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 74
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 319 NKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQDD 372
+K + EE L F FDK+A GYI ++EL+ + G I+E +++++K+ D+++
Sbjct: 9 SKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 64
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L +LF+M D + G I +ELK L+ G + E +I++LM D +N G IDY EFL
Sbjct: 9 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 66
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 324 EENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQDD 372
EE L F FDK+A GYI ++EL+ + G I+E +++++K+ D+++
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 56
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFLAA 314
LKE FK+ D D +G I+ EL+ + +G +L + E++ ++ AD+D G ++Y EF+
Sbjct: 11 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 70
Query: 315 TL 316
+
Sbjct: 71 MM 72
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 324 EENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
EE L AF FDKD +GYI+ EL+H G +++ ++ MIKE D D
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLD 57
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFLAA 314
LKE F++ D D +G I+ EL+ + +G +L + E+ +++ AD+D G I+Y EF+
Sbjct: 6 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 65
Query: 315 TL 316
+
Sbjct: 66 MM 67
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 324 EENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
EE L AF FDKD +G+I+ EL+H G +++ +D+MI+E D D
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 52
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFLAA 314
LKE FK+ D D +G I+ EL+ + +G +L + E++ ++ AD+D G ++Y EF+
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 65
Query: 315 TL 316
+
Sbjct: 66 MM 67
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 324 EENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
EE L AF FDKD +GYI+ EL+H G +++ ++ MIKE D D
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLD 52
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L +LF+M D + G I +ELK L+ G + E +I++LM D +N G IDY EFL
Sbjct: 12 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 69
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 324 EENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQ 370
EE L F FDK+A GYI ++EL+ + G I+E +++++K+ D+
Sbjct: 9 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDK 57
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 20 KSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLM---KTIVGVVECCHSLGVFHRDLKP 76
+ + +VME G L D + + + + +A++L+ I +E S HRDL
Sbjct: 85 RQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAA 142
Query: 77 ENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSP-YYVAPEVLRKH-YGPEAD 131
N L V+ +A +K DFGL+ D+ V + SP ++ APE L + + ++D
Sbjct: 143 RNIL---VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSD 199
Query: 132 VWSAGVILYILLS 144
VWS GV+LY L +
Sbjct: 200 VWSFGVVLYELFT 212
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 39/170 (22%)
Query: 9 HVVRIHDTYEDKSCV-----HIVMELCEGGELFDRIVKKGNY-SEREAAKLMKTIVGVVE 62
+++R+HD + + +IV+E+ + ++ K + +E+ ++ ++ +
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSD--LKKLFKTPIFLTEQHVKTILYNLLLGEK 145
Query: 63 CCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDV--------- 110
H G+ HRDLKP N L +++D ++K DFGL+ D+ + +D+
Sbjct: 146 FIHESGIIHRDLKPANCL---LNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEP 202
Query: 111 --------------VGSPYYVAPE--VLRKHYGPEADVWSAGVILYILLS 144
V + +Y APE +L+++Y D+WS G I LL+
Sbjct: 203 GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 170 SEPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
S+ + +IS+ DL+ ML N ++R+T + L HP++ D
Sbjct: 333 SKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKD 372
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSER-EAAKLMKTIVGVVECCHSLGV---FHRDLKPEN 78
+ ++ME G L D + K + ER + KL++ + + LG HRDL N
Sbjct: 88 LKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 144
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG---SP-YYVAPEVLRK-HYGPEADVW 133
L V+ + +K DFGL+ D+ F V SP ++ APE L + + +DVW
Sbjct: 145 IL---VENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVW 201
Query: 134 SAGVILYILLSGV 146
S GV+LY L + +
Sbjct: 202 SFGVVLYELFTYI 214
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 30/220 (13%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK-------------KGNYSEREA 50
L H +++ + E + +++ +E G L D + K S +
Sbjct: 82 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 141
Query: 51 AKLMKTIVGVVECCHSLG---VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVF 107
+L+ V L HRDL N L V E+ K DFGLS + EV+
Sbjct: 142 QQLLHFAADVARGMDYLSQKQFIHRDLAARNIL---VGENYVAKIADFGLS---RGQEVY 195
Query: 108 -SDVVGS--PYYVAPEVLRKH-YGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQIL 162
+G ++A E L Y +DVWS GV+L+ ++S G P+ T ++ ++
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 255
Query: 163 EGKIDFESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVL 202
+G + E N + DL+R+ + P R + ++L
Sbjct: 256 QG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 30/220 (13%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK-------------KGNYSEREA 50
L H +++ + E + +++ +E G L D + K S +
Sbjct: 72 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 131
Query: 51 AKLMKTIVGVVECCHSLG---VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVF 107
+L+ V L HRDL N L V E+ K DFGLS + EV+
Sbjct: 132 QQLLHFAADVARGMDYLSQKQFIHRDLAARNIL---VGENYVAKIADFGLS---RGQEVY 185
Query: 108 -SDVVGS--PYYVAPEVLRKH-YGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQIL 162
+G ++A E L Y +DVWS GV+L+ ++S G P+ T ++ ++
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 245
Query: 163 EGKIDFESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVL 202
+G + E N + DL+R+ + P R + ++L
Sbjct: 246 QG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 81/202 (40%), Gaps = 34/202 (16%)
Query: 21 SCVHIVMELCEGGELFDRIVK-KGNYSEREAAKLMKTIVGVVECCHSLGVFHRDLKPENF 79
S V +V +L G L D + + +G ++ I + + + HRDL N
Sbjct: 91 STVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNV 150
Query: 80 LFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSP----YYVAPEVLRKHYGPEADVWSA 135
L S + +K TDFGL+ DE G + +LR+ + ++DVWS
Sbjct: 151 LVKSPNH---VKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSY 207
Query: 136 GVILYILLSGVPPFWAETEIGIFRQILEGKIDFESEPWPNI-SESAKDLIRK--MLDQNP 192
GV ++ L++ F ++P+ I + DL+ K L Q P
Sbjct: 208 GVTVWELMT-----------------------FGAKPYDGIPAREIPDLLEKGERLPQPP 244
Query: 193 KRRLTAHEVLCHPWIVDDKVAP 214
+ + ++ W++D + P
Sbjct: 245 ICTIDVYMIMVKCWMIDSECRP 266
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 20 KSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLM---KTIVGVVECCHSLGVFHRDLKP 76
+ + +VME G L D + + + + +A++L+ I +E S HRDL
Sbjct: 98 RQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAA 155
Query: 77 ENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSP-YYVAPEVLRKH-YGPEAD 131
N L V+ +A +K DFGL+ D+ V + SP ++ APE L + + ++D
Sbjct: 156 RNIL---VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSD 212
Query: 132 VWSAGVILYILLS 144
VWS GV+LY L +
Sbjct: 213 VWSFGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 20 KSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLM---KTIVGVVECCHSLGVFHRDLKP 76
+ + +VME G L D + + + + +A++L+ I +E S HRDL
Sbjct: 86 RQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAA 143
Query: 77 ENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSP-YYVAPEVLRKH-YGPEAD 131
N L V+ +A +K DFGL+ D+ V + SP ++ APE L + + ++D
Sbjct: 144 RNIL---VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSD 200
Query: 132 VWSAGVILYILLS 144
VWS GV+LY L +
Sbjct: 201 VWSFGVVLYELFT 213
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 61 VECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDEVFSDVVGSPY-YV 117
+E S HRDL N L + E+ +K DFGL+ ++ PD V P ++
Sbjct: 212 MEFLSSRKCIHRDLAARNIL---LSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWM 268
Query: 118 APE-VLRKHYGPEADVWSAGVILYILLS-GVPPF 149
APE + K Y ++DVWS GV+L+ + S G P+
Sbjct: 269 APESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPY 302
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSEREAAKLM---KTIVGVVECCHSLGVFHRDLKPENF 79
+ +VME G L D + + + + +A++L+ I +E S HRDL N
Sbjct: 85 LRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 142
Query: 80 LFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSP-YYVAPEVLRKH-YGPEADVWS 134
L V+ +A +K DFGL+ D+ V + SP ++ APE L + + ++DVWS
Sbjct: 143 L---VESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 199
Query: 135 AGVILYILLS 144
GV+LY L +
Sbjct: 200 FGVVLYELFT 209
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 45.1 bits (105), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L+EE I K F M D D G I+ EL ++ +G + E+ ++ D D SGTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTI 73
Query: 307 DYGEFL 312
D+ EFL
Sbjct: 74 DFEEFL 79
Score = 28.1 bits (61), Expect = 9.4, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 329 SAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
+AF FD D G I+ EL + G ++ LD +I E+D+D
Sbjct: 24 AAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDED 68
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 28/105 (26%)
Query: 65 HSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFY---KPDEVFSDV----------- 110
H G+ HRDLKP N L +++D ++K DFGL+ K + +D+
Sbjct: 146 HESGIIHRDLKPANCL---LNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 111 ---------VGSPYYVAPE--VLRKHYGPEADVWSAGVILYILLS 144
V + +Y APE +L+++Y D+WS G I LL+
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 171 EPWPNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVD 209
+ +P+IS+ +L+ ML NP +R+T + L HP++ D
Sbjct: 329 QKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 249 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDY 308
EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++ ADID G ++Y
Sbjct: 1 EEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 57
Query: 309 GEFL 312
EF+
Sbjct: 58 EEFV 61
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 324 EENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
EE + AF FDKD +GYI+ EL+H G +++ +D+MI+E D D
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 50
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +VR++ + ++I+ E G L D +K + KL+ + E
Sbjct: 66 QHDKLVRLYAVVTREEPIYIITEYMAKGSLLD-FLKSDEGGKVLLPKLIDFSAQIAEGMA 124
Query: 66 SL---GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY---YVAP 119
+ HRDL+ N L V E K DFGL+ + +E ++ G+ + + AP
Sbjct: 125 YIERKNYIHRDLRAANVL---VSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAP 180
Query: 120 EVLR-KHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEG 164
E + + ++DVWS G++LY I+ G P+ T + + +G
Sbjct: 181 EAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQG 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGEL--FDRIVKKG--NYSEREAAKLMKTIVGVVECC 64
HVVR+ +VMEL G+L + R ++ N R L + I E
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 65 HSLGVF------HRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVG--SPY 115
+ HRDL N + V D +K DFG++ + D G
Sbjct: 138 DGMAYLNAKKFVHRDLAARNCM---VAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 116 YVAPEVLRKH-YGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEGKIDFESEPW 173
++APE L+ + +D+WS GV+L+ + S P+ + + + +++G + +P
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GYLDQP- 251
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKP 217
N E DL+R NPK R T E++ ++ D + P P
Sbjct: 252 DNCPERVTDLMRMCWQFNPKMRPTFLEIVN---LLKDDLHPSFP 292
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 248 NEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTID 307
+EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++ ADID G ++
Sbjct: 3 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 59
Query: 308 YGEFL 312
Y EF+
Sbjct: 60 YEEFV 64
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 324 EENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
EE + AF FDKD +GYI+ EL+H G +++ +D+MI+E D D
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 53
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 248 NEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTID 307
+EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++ ADID G ++
Sbjct: 3 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 59
Query: 308 YGEFL 312
Y EF+
Sbjct: 60 YEEFV 64
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 324 EENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
EE + AF FDKD +GYI+ EL+H G +++ +D+MI+E D D
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 53
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 248 NEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTID 307
+EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++ ADID G ++
Sbjct: 6 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 62
Query: 308 YGEFL 312
Y EF+
Sbjct: 63 YEEFV 67
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 324 EENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
EE + AF FDKD +GYI+ EL+H G +++ +D+MI+E D D
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 56
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 248 NEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTID 307
+EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++ ADID G ++
Sbjct: 7 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 63
Query: 308 YGEFL 312
Y EF+
Sbjct: 64 YEEFV 68
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 324 EENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
EE + AF FDKD +GYI+ EL+H G +++ +D+MI+E D D
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 57
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 248 NEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTID 307
+EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++ ADID G ++
Sbjct: 4 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 60
Query: 308 YGEFL 312
Y EF+
Sbjct: 61 YEEFV 65
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 324 EENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
EE + AF FDKD +GYI+ EL+H G +++ +D+MI+E D D
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 54
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGEL--FDRIVKKG--NYSEREAAKLMKTIVGVVECC 64
HVVR+ +VMEL G+L + R ++ N R L + I E
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 65 HSLGVF------HRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVG--SPY 115
+ HRDL N + V D +K DFG++ + D G
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCM---VAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 116 YVAPEVLRKH-YGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEGKIDFESEPW 173
++APE L+ + +D+WS GV+L+ + S P+ + + + +++G + +P
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GYLDQP- 254
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKP 217
N E DL+R NPK R T E++ ++ D + P P
Sbjct: 255 DNCPERVTDLMRMCWQFNPKMRPTFLEIVN---LLKDDLHPSFP 295
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGEL--FDR-------IVKKGN----YSEREAAK 52
+H+H+V+ + + + +V E + G+L F R ++ +GN ++ +
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 53 LMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPD--EVFSD 109
+ + I + S HRDL N L V E+ +K DFG+S Y D V
Sbjct: 133 IAQQIAAGMVYLASQHFVHRDLATRNCL---VGENLLVKIGDFGMSRDVYSTDYYRVGGH 189
Query: 110 VVGSPYYVAPE-VLRKHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEGKI 166
+ ++ PE ++ + + E+DVWS GV+L+ I G P++ + + I +G++
Sbjct: 190 TMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV 248
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 29/218 (13%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK-----------------KGNYSER 48
+H+H+V+ + D + +V E + G+L ++ ++ KG
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPDAMILVDGQPRQAKGELGLS 133
Query: 49 EAAKLMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPD--E 105
+ + I + S HRDL N L V + +K DFG+S Y D
Sbjct: 134 QMLHIASQIASGMVYLASQHFVHRDLATRNCL---VGANLLVKIGDFGMSRDVYSTDYYR 190
Query: 106 VFSDVVGSPYYVAPE-VLRKHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILE 163
V + ++ PE ++ + + E+DVWS GVIL+ I G P++ + + I +
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ 250
Query: 164 GKIDFESEPWPNISESAKDLIRKMLDQNPKRRLTAHEV 201
G++ P + D++ + P++RL E+
Sbjct: 251 GRVLERPRVCP---KEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
+H +VR++ + ++I+ E G L D +K + KL+ + E
Sbjct: 65 QHDKLVRLYAVVTKEEPIYIITEFMAKGSLLD-FLKSDEGGKVLLPKLIDFSAQIAEGMA 123
Query: 66 SL---GVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPY---YVAP 119
+ HRDL+ N L V E K DFGL+ + +E ++ G+ + + AP
Sbjct: 124 YIERKNYIHRDLRAANVL---VSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAP 179
Query: 120 EVLR-KHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEG 164
E + + +++VWS G++LY I+ G P+ T + + +G
Sbjct: 180 EAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQG 226
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 30/220 (13%)
Query: 4 LSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVK-------------KGNYSEREA 50
L H +++ + E + +++ +E G L D + K S +
Sbjct: 79 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 138
Query: 51 AKLMKTIVGVVECCHSLG---VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVF 107
+L+ V L HR+L N L V E+ K DFGLS + EV+
Sbjct: 139 QQLLHFAADVARGMDYLSQKQFIHRNLAARNIL---VGENYVAKIADFGLS---RGQEVY 192
Query: 108 -SDVVGS--PYYVAPEVLRKH-YGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQIL 162
+G ++A E L Y +DVWS GV+L+ ++S G P+ T ++ ++
Sbjct: 193 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 252
Query: 163 EGKIDFESEPWPNISESAKDLIRKMLDQNPKRRLTAHEVL 202
+G + E N + DL+R+ + P R + ++L
Sbjct: 253 QG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 244 AERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNS 303
ER + EEI LK F++ D DNSGTIT +L+ K +G L E E+++++ AD ++
Sbjct: 3 GERDSREEI--LK-AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDD 59
Query: 304 GTIDYGEFL 312
ID EF+
Sbjct: 60 NEIDEDEFI 68
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 325 ENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQDD 372
E +L AF FD D SG ITI +L+ KE G ++E L +MI E D++D
Sbjct: 9 EEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRND 58
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 43.9 bits (102), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFLA 313
++ +FK DT+ G I+ EL D L+ +GS + E++ +M D D G ID+ EF++
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFIS 62
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L+EE I K F M D D G I+ EL ++ +G + E+ +++ D D SGTI
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 62
Query: 307 DYGEFLAATLHLNK 320
D+ EFL + K
Sbjct: 63 DFEEFLVMMVRQMK 76
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 329 SAFSFFDKDASGYITIDELQHACKEFGI--SELHLDDMIKEIDQD 371
+AF FD D G I+ EL + G ++ LD +I+E+D+D
Sbjct: 13 AAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDED 57
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 43.9 bits (102), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFLA 313
++ +FK DT+ G I+ EL D L+ +GS + E++ +M D D G ID+ EF++
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFIS 61
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L+EE I K F M D D G I+ EL ++ +G + E+ +++ D D SGTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 307 DYGEFL 312
D+ EFL
Sbjct: 74 DFEEFL 79
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 329 SAFSFFDKDASGYITIDELQHACKEFGI--SELHLDDMIKEIDQD 371
+AF FD D G I+ EL + G ++ LD +I+E+D+D
Sbjct: 24 AAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDED 68
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
+ E+ +EEE L E FK+ D D +G I+ EL+ + +G +L + E+ +++ ADID
Sbjct: 1 MKEQDSEEE---LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDG 57
Query: 303 SGTIDYGEFL 312
G I+Y EF+
Sbjct: 58 DGHINYEEFV 67
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 324 EENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
EE L+ AF FD+D +G I+ EL+H G +++ +D+MI+E D D
Sbjct: 7 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADID 56
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGEL--FDRIVKKG--NYSEREAAKLMKTIVGVVECC 64
HVVR+ +VMEL G+L + R ++ N R L + I E
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 65 HSLGVF------HRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVG--SPY 115
+ HR+L N + V D +K DFG++ Y+ D G
Sbjct: 141 DGMAYLNAKKFVHRNLAARNCM---VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 116 YVAPEVLRKH-YGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEGKIDFESEPW 173
++APE L+ + +D+WS GV+L+ + S P+ + + + +++G + +P
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GYLDQP- 254
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKP 217
N E DL+R NP R T E++ ++ D + P P
Sbjct: 255 DNCPERVTDLMRMCWQFNPNMRPTFLEIVN---LLKDDLHPSFP 295
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 71 HRDLKPENFLFLSVDEDAALKATDFGLSV------FYKPDEVFSDVVGSPYYVAPEVLRK 124
HRDL N L V E+ +K DFGLS +YK D +D + + +
Sbjct: 197 HRDLATRNCL---VGENMVVKIADFGLSRNIYSADYYKADG--NDAIPIRWMPPESIFYN 251
Query: 125 HYGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEGKI 166
Y E+DVW+ GV+L+ + S G+ P++ + + +G I
Sbjct: 252 RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNI 294
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGEL--FDRIVKKG--NYSEREAAKLMKTIVGVVECC 64
HVVR+ +VMEL G+L + R ++ N R L + I E
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 65 HSLGVF------HRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVG--SPY 115
+ HR+L N + V D +K DFG++ Y+ D G
Sbjct: 142 DGMAYLNAKKFVHRNLAARNCM---VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 116 YVAPEVLRKH-YGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEGKIDFESEPW 173
++APE L+ + +D+WS GV+L+ + S P+ + + + +++G + +P
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GYLDQP- 255
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKP 217
N E DL+R NP R T E++ ++ D + P P
Sbjct: 256 DNCPERVTDLMRMCWQFNPNMRPTFLEIVN---LLKDDLHPSFP 296
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 25/167 (14%)
Query: 3 HLSEHQHVVRI-HDTYEDKSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIVG 59
H+ H +VV + + + +++E C+ G L + K N ++ K T+
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 60 VVECCHSLGV------------FHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDE 105
++ C+S V HRDL N L + E +K DFGL+ ++ PD
Sbjct: 146 LI--CYSFQVAKGMEFLASRKXIHRDLAARNIL---LSEKNVVKICDFGLARDIYKDPDY 200
Query: 106 VFSDVVGSPY-YVAPE-VLRKHYGPEADVWSAGVILYILLS-GVPPF 149
V P ++APE + + Y ++DVWS GV+L+ + S G P+
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 253 GGLKEL---FKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYG 309
GL++L F+ D D G IT DEL+ + +G L + E+ ++ AD+D G ++Y
Sbjct: 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYE 62
Query: 310 EF 311
EF
Sbjct: 63 EF 64
Score = 40.0 bits (92), Expect = 0.002, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 325 ENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
E+L AF FD+D G+IT+DEL+ A G + + LD MI+E D D
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVD 54
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSER-EAAKLMKTIVGVVECCHSLGV---FHRDLKPEN 78
+ ++ME G L D + K + ER + KL++ + + LG HRDL N
Sbjct: 87 LKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 143
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG---SP-YYVAPEVLRK-HYGPEADVW 133
L V+ + +K DFGL+ D+ V SP ++ APE L + + +DVW
Sbjct: 144 IL---VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 200
Query: 134 SAGVILYILLSGV 146
S GV+LY L + +
Sbjct: 201 SFGVVLYELFTYI 213
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSER-EAAKLMKTIVGVVECCHSLGV---FHRDLKPEN 78
+ ++ME G L D + K + ER + KL++ + + LG HRDL N
Sbjct: 91 LKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 147
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG---SP-YYVAPEVLRK-HYGPEADVW 133
L V+ + +K DFGL+ D+ V SP ++ APE L + + +DVW
Sbjct: 148 IL---VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 204
Query: 134 SAGVILYILLSGV 146
S GV+LY L + +
Sbjct: 205 SFGVVLYELFTYI 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSER-EAAKLMKTIVGVVECCHSLGV---FHRDLKPEN 78
+ ++ME G L D + K + ER + KL++ + + LG HRDL N
Sbjct: 119 LKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 175
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG---SP-YYVAPEVLRK-HYGPEADVW 133
L V+ + +K DFGL+ D+ V SP ++ APE L + + +DVW
Sbjct: 176 IL---VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 232
Query: 134 SAGVILYILLSGV 146
S GV+LY L + +
Sbjct: 233 SFGVVLYELFTYI 245
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 42/66 (63%)
Query: 247 LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTI 306
L+EE+ +KE F + DT+ +G+I + ELK ++ +G + + EI +LM+ D + +G I
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 307 DYGEFL 312
+ +FL
Sbjct: 61 GFDDFL 66
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 284 SQLMESEIKDLMDAADIDNSGTIDYGEFLAATLHLNKLEREENLLSAFSFFDKDASGYIT 343
S+ + EIK+ D D + +G+IDY E A L ++ +L + +D++ +GYI
Sbjct: 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIG 61
Query: 344 IDEL 347
D+
Sbjct: 62 FDDF 65
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSER-EAAKLMKTIVGVVECCHSLGV---FHRDLKPEN 78
+ ++ME G L D + K + ER + KL++ + + LG HRDL N
Sbjct: 88 LKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 144
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG---SP-YYVAPEVLRK-HYGPEADVW 133
L V+ + +K DFGL+ D+ V SP ++ APE L + + +DVW
Sbjct: 145 IL---VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 201
Query: 134 SAGVILYILLSGV 146
S GV+LY L + +
Sbjct: 202 SFGVVLYELFTYI 214
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
++E+ +EEI LK FK+ D D +G I+F LK K +G L + E+++++D AD D
Sbjct: 4 MSEKDTKEEI--LK-AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 60
Query: 303 SGTIDYGEFL 312
G + EFL
Sbjct: 61 DGEVSEQEFL 70
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 315 TLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
T +++ + +E +L AF FD D +G I+ L+ KE G +++ L +MI E D+D
Sbjct: 1 TQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRD 59
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 43.1 bits (100), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 249 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDY 308
E+E+ ++E FK+ D D +G I+ EL ++ +G E E++ ++ D+D G +D+
Sbjct: 32 EDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDF 91
Query: 309 GEFL 312
EF+
Sbjct: 92 EEFV 95
Score = 33.9 bits (76), Expect = 0.14, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 325 ENLLSAFSFFDKDASGYITIDELQHACKEFGI--SELHLDDMIKEIDQD 371
E + AF FD+D +G+I+ EL A + G +E+ L+ +I+ +D D
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMD 84
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSER-EAAKLMKTIVGVVECCHSLGV---FHRDLKPEN 78
+ ++ME G L D + K + ER + KL++ + + LG HR+L N
Sbjct: 89 LKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRN 145
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG---SP-YYVAPEVLRK-HYGPEADVW 133
L V+ + +K DFGL+ D+ + V SP ++ APE L + + +DVW
Sbjct: 146 IL---VENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVW 202
Query: 134 SAGVILYILLSGV 146
S GV+LY L + +
Sbjct: 203 SFGVVLYELFTYI 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSER-EAAKLMKTIVGVVECCHSLGV---FHRDLKPEN 78
+ ++ME G L D + K + ER + KL++ + + LG HRDL N
Sbjct: 93 LKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 149
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG---SP-YYVAPEVLRK-HYGPEADVW 133
L V+ + +K DFGL+ D+ V SP ++ APE L + + +DVW
Sbjct: 150 IL---VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 206
Query: 134 SAGVILYILLSGV 146
S GV+LY L + +
Sbjct: 207 SFGVVLYELFTYI 219
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 20 KSCVHIVMELCEGGELFDRIVKKGNYSER-EAAKLMKTIVGVVECCHSLGV---FHRDLK 75
+ + ++ME G L D + K + ER + KL++ + + LG HRDL
Sbjct: 89 RRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 145
Query: 76 PENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG---SP-YYVAPEVLRK-HYGPEA 130
N L V+ + +K DFGL+ D+ V SP ++ APE L + + +
Sbjct: 146 TRNIL---VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVAS 202
Query: 131 DVWSAGVILYILLSGV 146
DVWS GV+LY L + +
Sbjct: 203 DVWSFGVVLYELFTYI 218
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSER-EAAKLMKTIVGVVECCHSLGV---FHRDLKPEN 78
+ ++ME G L D + K + ER + KL++ + + LG HRDL N
Sbjct: 94 LKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 150
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG---SP-YYVAPEVLRK-HYGPEADVW 133
L V+ + +K DFGL+ D+ V SP ++ APE L + + +DVW
Sbjct: 151 IL---VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 207
Query: 134 SAGVILYILLSGV 146
S GV+LY L + +
Sbjct: 208 SFGVVLYELFTYI 220
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSER-EAAKLMKTIVGVVECCHSLGV---FHRDLKPEN 78
+ ++ME G L D + K + ER + KL++ + + LG HRDL N
Sbjct: 88 LKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 144
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG---SP-YYVAPEVLRK-HYGPEADVW 133
L V+ + +K DFGL+ D+ V SP ++ APE L + + +DVW
Sbjct: 145 IL---VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 201
Query: 134 SAGVILYILLSGV 146
S GV+LY L + +
Sbjct: 202 SFGVVLYELFTYI 214
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSER-EAAKLMKTIVGVVECCHSLGV---FHRDLKPEN 78
+ ++ME G L D + K + ER + KL++ + + LG HRDL N
Sbjct: 86 LKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 142
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG---SP-YYVAPEVLRK-HYGPEADVW 133
L V+ + +K DFGL+ D+ V SP ++ APE L + + +DVW
Sbjct: 143 IL---VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 199
Query: 134 SAGVILYILLSGV 146
S GV+LY L + +
Sbjct: 200 SFGVVLYELFTYI 212
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 232 MNKLKKMALRVIAER---LNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLME 288
M K LR ++ + L EEI L+E F+ D D G I +L + ++ +G E
Sbjct: 1 MGNCVKYPLRNLSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTE 60
Query: 289 SEIKDLMDAADIDNSGTIDYGEF--------LAATLHLNKLEREENLLSAFSFFDKDASG 340
E+ +L +++ G +D+ +F LA T + + + L AF FD + G
Sbjct: 61 MELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGV---KELRDAFREFDTNGDG 117
Query: 341 YITIDELQHACKEF---GISELHLDDMIKEID 369
I+ EL+ A ++ + ++++I+++D
Sbjct: 118 EISTSELREAMRKLLGHQVGHRDIEEIIRDVD 149
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 238 MALRVIAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRV-GSQLMESEIKDLMD 296
M +++AE + + L++ F+ DT+ G I+ EL++ ++++ G Q+ +I++++
Sbjct: 87 MGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIR 146
Query: 297 AADIDNSGTIDYGEFL 312
D++ G +D+ EF+
Sbjct: 147 DVDLNGDGRVDFEEFV 162
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSER-EAAKLMKTIVGVVECCHSLGV---FHRDLKPEN 78
+ ++ME G L D + K + ER + KL++ + + LG HRDL N
Sbjct: 95 LKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 151
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG---SP-YYVAPEVLRK-HYGPEADVW 133
L V+ + +K DFGL+ D+ V SP ++ APE L + + +DVW
Sbjct: 152 IL---VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 208
Query: 134 SAGVILYILLS 144
S GV+LY L +
Sbjct: 209 SFGVVLYELFT 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSER-EAAKLMKTIVGVVECCHSLGV---FHRDLKPEN 78
+ ++ME G L D + K + ER + KL++ + + LG HRDL N
Sbjct: 106 LKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 162
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG---SP-YYVAPEVLRK-HYGPEADVW 133
L V+ + +K DFGL+ D+ V SP ++ APE L + + +DVW
Sbjct: 163 IL---VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 219
Query: 134 SAGVILYILLS 144
S GV+LY L +
Sbjct: 220 SFGVVLYELFT 230
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 248 NEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTID 307
+EEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++ ADID G ++
Sbjct: 27 SEEEI---REAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 83
Query: 308 YGEFL 312
Y EF+
Sbjct: 84 YEEFV 88
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 324 EENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQD 371
EE + AF DKD +GYI+ EL+H G +++ +D+MI+E D D
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 77
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSER-EAAKLMKTIVGVVECCHSLGV---FHRDLKPEN 78
+ ++ME G L D + K + ER + KL++ + + LG HRDL N
Sbjct: 106 LKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 162
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG---SP-YYVAPEVLRK-HYGPEADVW 133
L V+ + +K DFGL+ D+ V SP ++ APE L + + +DVW
Sbjct: 163 IL---VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 219
Query: 134 SAGVILYILLS 144
S GV+LY L +
Sbjct: 220 SFGVVLYELFT 230
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 25/169 (14%)
Query: 3 HLSEHQHVVRI-HDTYEDKSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIVG 59
H+ H +VV + + + +++E C+ G L + K N +EA + +
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFL 147
Query: 60 VVE--CCHSLGV------------FHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKP 103
+E C+S V HRDL N L + E +K DFGL+ ++ P
Sbjct: 148 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL---LSEKNVVKICDFGLARDIYKDP 204
Query: 104 DEVFSDVVGSPY-YVAPE-VLRKHYGPEADVWSAGVILYILLS-GVPPF 149
D V P ++APE + + Y ++DVWS GV+L+ + S G P+
Sbjct: 205 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 253
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIV-KKGNYSEREAAKLMKTIVG 59
MH L ++ ++VR+ + ++ + +VME+ GG L +V K+ A+L+ +
Sbjct: 64 MHQL-DNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM 121
Query: 60 VVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYY--- 116
++ HRDL N L V+ A K +DFGLS D+ + + +
Sbjct: 122 GMKYLEEKNFVHRDLAARNVLL--VNRHYA-KISDFGLSKALGADDSYYTARSAGKWPLK 178
Query: 117 -VAPEVLR-KHYGPEADVWSAGVILYILLS-GVPPF 149
APE + + + +DVWS GV ++ LS G P+
Sbjct: 179 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY 214
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 243 IAERLNEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDN 302
++E+ +EEI LK FK+ D D +G I+F LK K +G L + E+++++D AD D
Sbjct: 14 MSEKDTKEEI--LK-AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 70
Query: 303 SGTIDYGEFL 312
G + EFL
Sbjct: 71 DGEVSEQEFL 80
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 306 IDYGEFLAA-TLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLD 362
+++G+FL T +++ + +E +L AF FD D +G I+ L+ KE G +++ L
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 60
Query: 363 DMIKEIDQD 371
+MI E D+D
Sbjct: 61 EMIDEADRD 69
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 77/185 (41%), Gaps = 24/185 (12%)
Query: 1 MHHLSEHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKG------NYSEREAAKLM 54
M + +H++++ + +++++E G L + + + +Y +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 55 KTIVGVVECCHSLG----------VFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPD 104
T +V C + L HRDL N L V E+ +K DFGL+
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIADFGLARDINNI 210
Query: 105 EVFSDVVGSPY---YVAPEVL-RKHYGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFR 159
+ + + ++APE L + Y ++DVWS GV+++ I G P+ +F+
Sbjct: 211 DYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 160 QILEG 164
+ EG
Sbjct: 271 LLKEG 275
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFL 312
L F++ D + G I +EL + L+ G ++E +I+DLM +D +N G ID+ EFL
Sbjct: 12 LANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFL 69
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 320 KLEREENLLSAFSFFDKDASGYITIDELQHACKEFG--ISELHLDDMIKEIDQDD 372
K + EE L + F FDK+A G+I I+EL + G + E ++D++K+ D+++
Sbjct: 5 KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNN 59
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 258 LFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFLA---- 313
LF + D DN+G I F+E L +E ++ + D+++ G I + E L
Sbjct: 68 LFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127
Query: 314 --------ATLHLNKLEREENLLSAFSFFDKDASGYITIDELQHACK 352
TL+ ++ E + F DK+ GYIT+DE + K
Sbjct: 128 VYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK 174
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 247 LNEEEIG---GLKELFKMIDTDNSGTITFDELKDGLK 280
LNE+E +K++FK++D + G IT DE ++G K
Sbjct: 138 LNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK 174
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 19/168 (11%)
Query: 1 MHHLSEHQHVVR-IHDTYEDKSCVH---IVMELCEGGELFD---RIVKKGNY-SEREAAK 52
MH L H +++R + ++ H +++ + G L++ R+ KGN+ +E +
Sbjct: 79 MHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW 138
Query: 53 LMKTIVGVVECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFY----KPDEVFS 108
L+ I +E H+ G HRDLKP N L + + + + +
Sbjct: 139 LLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQ 198
Query: 109 DVVG---SPYYVAPEV--LRKH--YGPEADVWSAGVILYILLSGVPPF 149
D + Y APE+ ++ H DVWS G +LY ++ G P+
Sbjct: 199 DWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDEVFSDVVGSPY-YVAPE-V 121
S HRDL N L + E +K DFGL+ ++ PD V P ++APE +
Sbjct: 166 SRKCIHRDLAARNIL---LSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETI 222
Query: 122 LRKHYGPEADVWSAGVILYILLS-GVPPF 149
+ Y ++DVWS GV+L+ + S G P+
Sbjct: 223 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 256 KELFKMIDTDNSGTITFDELKDGLKRVGSQLMESEIKDLMDAADIDNSGTIDYGEFLAAT 315
+ ++K DTD SGTI EL + G L E + +++ D SG +D+ F++
Sbjct: 91 QAIYKQFDTDRSGTICSSELPGAFEAAGFHLNE-HLYNMIIRRYSDESGNMDFDNFISCL 149
Query: 316 LHLNKLEREENLLSAFSFFDKDASGYITID 345
+ L+ + R AF DKD +G I ++
Sbjct: 150 VRLDAMFR------AFKSLDKDGTGQIQVN 173
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 7 HQHVVRIHD--TYEDKSCVHIVMELCEGGELFDRIVKKGN-YSEREAAKLMKTIVGVVEC 63
H+++V+ T + + + ++ME G L + + K N + ++ K I ++
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 141
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSP-YYVAP 119
S HRDL N L V+ + +K DFGL+ + D+ D SP ++ AP
Sbjct: 142 LGSRQYVHRDLAARNVL---VESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 198
Query: 120 EVL-RKHYGPEADVWSAGVILYILLS 144
E L + + +DVWS GV L+ LL+
Sbjct: 199 ECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 7 HQHVVRIHD--TYEDKSCVHIVMELCEGGELFDRIVKKGN-YSEREAAKLMKTIVGVVEC 63
H+++V+ T + + + ++ME G L + + K N + ++ K I ++
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 129
Query: 64 CHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDE---VFSDVVGSP-YYVAP 119
S HRDL N L V+ + +K DFGL+ + D+ D SP ++ AP
Sbjct: 130 LGSRQYVHRDLAARNVL---VESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 186
Query: 120 EVL-RKHYGPEADVWSAGVILYILLS 144
E L + + +DVWS GV L+ LL+
Sbjct: 187 ECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDEVFSDVVGSPY-YVAPE-V 121
S HRDL N L + E +K DFGL+ ++ PD V P ++APE +
Sbjct: 157 SRKCIHRDLAARNIL---LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 213
Query: 122 LRKHYGPEADVWSAGVILYILLS-GVPPF 149
+ Y ++DVWS GV+L+ + S G P+
Sbjct: 214 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDEVFSDVVGSPY-YVAPE-V 121
S HRDL N L + E +K DFGL+ ++ PD V P ++APE +
Sbjct: 157 SRKCIHRDLAARNIL---LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 213
Query: 122 LRKHYGPEADVWSAGVILYILLS-GVPPF 149
+ Y ++DVWS GV+L+ + S G P+
Sbjct: 214 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 24/224 (10%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGEL--FDRIVKKG--NYSEREAAKLMKTIVGVVECC 64
HVVR+ +VMEL G+L + R ++ N R L + I E
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 65 HSLGVF------HRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVG--SPY 115
+ HRDL N + V D +K DFG++ + D G
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCM---VAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 116 YVAPEVLRKH-YGPEADVWSAGVILYILLS-GVPPFWAETEIGIFRQILEGKIDFESEPW 173
++APE L+ + +D+WS GV+L+ + S P+ + + + +++G + +P
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GYLDQP- 254
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVLCHPWIVDDKVAPDKP 217
N E DL+R NP R T E++ ++ D + P P
Sbjct: 255 DNCPERVTDLMRMCWQFNPNMRPTFLEIVN---LLKDDLHPSFP 295
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 259 FKMIDTDNSGTITFDELKDGLKRVGSQ-LMESEIKDLMDAADIDNSGTIDYGEFL 312
FK+ D + G I FDE K +++VG + L ++E+++ M AD D +G ID EF+
Sbjct: 14 FKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 324 EENLLSAFSFFDKDASGYITIDELQHACKEFG---ISELHLDDMIKEIDQD 371
EE +L AF FD + G I DE + ++ G +++ +++ +KE D+D
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADED 57
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDEVFSDVVGSPY-YVAPE-V 121
S HRDL N L + E +K DFGL+ ++ PD V P ++APE +
Sbjct: 209 SRKCIHRDLAARNIL---LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 265
Query: 122 LRKHYGPEADVWSAGVILYILLS-GVPPF 149
+ Y ++DVWS GV+L+ + S G P+
Sbjct: 266 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 294
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGSQ---LMESEIKDLMDAADIDNSGTIDYGEF 311
LKE+F+++D D SG I DELK L+R S L SE K + AAD D G I EF
Sbjct: 43 LKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEF 102
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDEVFSDVVGSPY-YVAPE-V 121
S HRDL N L + E +K DFGL+ ++ PD V P ++APE +
Sbjct: 216 SRKCIHRDLAARNIL---LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 272
Query: 122 LRKHYGPEADVWSAGVILYILLS-GVPPF 149
+ Y ++DVWS GV+L+ + S G P+
Sbjct: 273 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 301
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDEVFSDVVGSPY-YVAPE-V 121
S HRDL N L + E +K DFGL+ ++ PD V P ++APE +
Sbjct: 211 SRKCIHRDLAARNIL---LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 267
Query: 122 LRKHYGPEADVWSAGVILYILLS-GVPPF 149
+ Y ++DVWS GV+L+ + S G P+
Sbjct: 268 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 296
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 23/167 (13%)
Query: 3 HLSEHQHVVRI-HDTYEDKSCVHIVMELCEGGELFDRIVKKGN----YSEREAAKLMKTI 57
H+ H +VV + + + +++E C+ G L + K N Y + K T+
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTL 147
Query: 58 VGVV----------ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDE 105
++ E S HRDL N L + E +K DFGL+ + PD
Sbjct: 148 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNIL---LSEKNVVKICDFGLARDIXKDPDX 204
Query: 106 VFSDVVGSPY-YVAPE-VLRKHYGPEADVWSAGVILYILLS-GVPPF 149
V P ++APE + + Y ++DVWS GV+L+ + S G P+
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDEVFSDVVGSPY-YVAPE-V 121
S HRDL N L + E +K DFGL+ ++ PD V P ++APE +
Sbjct: 218 SRKCIHRDLAARNIL---LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 274
Query: 122 LRKHYGPEADVWSAGVILYILLS-GVPPF 149
+ Y ++DVWS GV+L+ + S G P+
Sbjct: 275 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 303
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 23 VHIVMELCEGGELFDRIVKKGNYSER-EAAKLMKTIVGVVECCHSLGV---FHRDLKPEN 78
+ ++ME G L + + K + ER + KL++ + + LG HRDL N
Sbjct: 91 LKLIMEFLPYGSLREYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 147
Query: 79 FLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVG---SP-YYVAPEVLRK-HYGPEADVW 133
L V+ + +K DFGL+ D+ V SP ++ APE L + + +DVW
Sbjct: 148 IL---VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 204
Query: 134 SAGVILYILLSGV 146
S GV+LY L + +
Sbjct: 205 SFGVVLYELFTYI 217
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDEVFSDVVGSPY-YVAPE-V 121
S HRDL N L + E +K DFGL+ ++ PD V P ++APE +
Sbjct: 166 SRKCIHRDLAARNIL---LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 222
Query: 122 LRKHYGPEADVWSAGVILYILLS-GVPPF 149
+ Y ++DVWS GV+L+ + S G P+
Sbjct: 223 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 21/209 (10%)
Query: 9 HVVRIHDTYEDKSCVHIVMELCEGGEL--FDRIVKKG--NYSEREAAKLMKTIVGVVECC 64
HVVR+ ++MEL G+L + R ++ N L K I E
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 65 HSLGVF------HRDLKPENFLFLSVDEDAALKATDFGLSV-FYKPDEVFSDVVG--SPY 115
+ HRDL N + V ED +K DFG++ Y+ D G
Sbjct: 139 DGMAYLNANKFVHRDLAARNCM---VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 195
Query: 116 YVAPEVLRKH-YGPEADVWSAGVILY-ILLSGVPPFWAETEIGIFRQILEGKIDFESEPW 173
+++PE L+ + +DVWS GV+L+ I P+ + + R ++EG + + +
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 255
Query: 174 PNISESAKDLIRKMLDQNPKRRLTAHEVL 202
P++ +L+R NPK R + E++
Sbjct: 256 PDM---LFELMRMCWQYNPKMRPSFLEII 281
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
++ ++VR+ E +S + +VME+ E G L + + + ++ +L+ + ++
Sbjct: 64 DNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 122
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYY----VAPEV 121
HRDL N L ++ K +DFGLS + DE + + APE
Sbjct: 123 ESNFVHRDLAARNVLLVT---QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 179
Query: 122 LRKH-YGPEADVWSAGVILYILLS-GVPPF 149
+ + + ++DVWS GV+++ S G P+
Sbjct: 180 INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 209
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDEVFSDVVGSPY-YVAPE-V 121
S HRDL N L + E +K DFGL+ ++ PD V P ++APE +
Sbjct: 203 SRKCIHRDLAARNIL---LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 259
Query: 122 LRKHYGPEADVWSAGVILYILLS-GVPPF 149
+ Y ++DVWS GV+L+ + S G P+
Sbjct: 260 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 288
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 21/165 (12%)
Query: 3 HLSEHQHVVRIHDT-YEDKSCVHIVMELCEGGELFDRIVKKGN--YSEREAAKLMKTIVG 59
H+ H +VV + + + +++E C+ G L + K N ++ K T+
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 60 VV----------ECCHSLGVFHRDLKPENFLFLSVDEDAALKATDFGLS--VFYKPDEVF 107
++ E S HRDL N L + E +K DFGL+ ++ PD V
Sbjct: 146 LIXYSFQVAKGMEFLASRKXIHRDLAARNIL---LSEKNVVKIXDFGLARDIYKDPDYVR 202
Query: 108 SDVVGSPY-YVAPE-VLRKHYGPEADVWSAGVILYILLS-GVPPF 149
P ++APE + + Y ++DVWS GV+L+ + S G P+
Sbjct: 203 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 255 LKELFKMIDTDNSGTITFDELKDGLKRVGS---QLMESEIKDLMDAADIDNSGTIDYGEF 311
+K++F+ ID D SG + +ELK L++ S +L ESE K LM AAD D G I EF
Sbjct: 44 VKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEF 103
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 6 EHQHVVRIHDTYEDKSCVHIVMELCEGGELFDRIVKKGNYSEREAAKLMKTIVGVVECCH 65
++ ++VR+ E +S + +VME+ E G L + + + ++ +L+ + ++
Sbjct: 76 DNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 134
Query: 66 SLGVFHRDLKPENFLFLSVDEDAALKATDFGLSVFYKPDEVFSDVVGSPYY----VAPEV 121
HRDL N L ++ K +DFGLS + DE + + APE
Sbjct: 135 ESNFVHRDLAARNVLLVT---QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 191
Query: 122 LRKH-YGPEADVWSAGVILYILLS-GVPPF 149
+ + + ++DVWS GV+++ S G P+
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 221
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,682,826
Number of Sequences: 62578
Number of extensions: 500020
Number of successful extensions: 5131
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 410
Number of HSP's that attempted gapping in prelim test: 1735
Number of HSP's gapped (non-prelim): 1884
length of query: 379
length of database: 14,973,337
effective HSP length: 100
effective length of query: 279
effective length of database: 8,715,537
effective search space: 2431634823
effective search space used: 2431634823
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)