Query 017027
Match_columns 379
No_of_seqs 185 out of 731
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 04:58:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017027.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017027hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02629 powdery mildew resist 100.0 2E-112 5E-117 839.6 31.9 327 51-379 47-385 (387)
2 PF13839 PC-Esterase: GDSL/SGN 100.0 2.5E-49 5.3E-54 374.2 21.6 241 108-379 1-261 (263)
3 PF14416 PMR5N: PMR5 N termina 99.9 1.6E-26 3.5E-31 167.4 4.6 54 54-107 1-55 (55)
4 cd01842 SGNH_hydrolase_like_5 98.6 4.5E-07 9.7E-12 81.3 10.7 97 209-329 51-152 (183)
5 cd01841 NnaC_like NnaC (CMP-Ne 96.7 0.009 1.9E-07 52.7 8.8 88 208-329 51-140 (174)
6 cd01829 SGNH_hydrolase_peri2 S 96.1 0.088 1.9E-06 47.3 11.9 94 208-329 59-153 (200)
7 cd01838 Isoamyl_acetate_hydrol 95.8 0.026 5.7E-07 50.3 6.7 99 208-330 63-167 (199)
8 cd01834 SGNH_hydrolase_like_2 95.5 0.13 2.8E-06 45.4 10.1 97 208-330 61-158 (191)
9 COG2845 Uncharacterized protei 92.8 1.6 3.5E-05 43.0 11.7 166 117-336 110-278 (354)
10 cd01827 sialate_O-acetylestera 88.2 4.3 9.3E-05 35.8 9.6 105 208-342 67-176 (188)
11 cd04502 SGNH_hydrolase_like_7 87.6 2.9 6.2E-05 36.5 7.9 86 208-328 50-135 (171)
12 cd01831 Endoglucanase_E_like E 86.6 21 0.00045 31.1 13.7 97 209-341 56-156 (169)
13 cd01836 FeeA_FeeB_like SGNH_hy 81.6 7.9 0.00017 34.3 8.1 105 208-341 67-177 (191)
14 cd01828 sialate_O-acetylestera 70.9 33 0.00072 29.6 8.9 88 208-330 48-135 (169)
15 cd01833 XynB_like SGNH_hydrola 68.8 65 0.0014 27.2 10.3 99 208-341 40-145 (157)
16 cd01825 SGNH_hydrolase_peri1 S 67.6 55 0.0012 28.5 9.8 93 208-330 56-148 (189)
17 cd00229 SGNH_hydrolase SGNH_hy 66.4 62 0.0013 26.8 9.5 93 207-331 64-159 (187)
18 cd01832 SGNH_hydrolase_like_1 65.4 32 0.00069 30.0 7.7 90 208-330 67-156 (185)
19 cd04501 SGNH_hydrolase_like_4 65.4 43 0.00093 29.2 8.6 90 208-330 59-149 (183)
20 cd04506 SGNH_hydrolase_YpmR_li 62.4 23 0.0005 31.6 6.4 76 244-332 100-176 (204)
21 cd01844 SGNH_hydrolase_like_6 53.9 98 0.0021 27.0 8.8 29 247-277 75-103 (177)
22 cd01820 PAF_acetylesterase_lik 45.9 76 0.0017 28.7 7.0 100 208-341 89-198 (214)
23 cd01820 PAF_acetylesterase_lik 45.2 17 0.00036 33.2 2.5 16 122-137 32-47 (214)
24 cd01821 Rhamnogalacturan_acety 45.0 1.6E+02 0.0035 26.0 8.9 92 207-329 64-156 (198)
25 cd01825 SGNH_hydrolase_peri1 S 44.0 9.7 0.00021 33.4 0.7 12 124-135 1-12 (189)
26 cd01844 SGNH_hydrolase_like_6 43.5 12 0.00026 32.9 1.2 13 124-136 1-13 (177)
27 cd01835 SGNH_hydrolase_like_3 41.8 13 0.00027 33.1 1.1 92 207-329 68-159 (193)
28 cd01832 SGNH_hydrolase_like_1 40.2 12 0.00027 32.7 0.7 11 124-134 1-11 (185)
29 PF09949 DUF2183: Uncharacteri 37.6 26 0.00056 28.7 2.2 22 114-135 56-77 (100)
30 PF13472 Lipase_GDSL_2: GDSL-l 37.6 1.4E+02 0.0029 24.9 6.9 94 207-330 60-154 (179)
31 PRK10528 multifunctional acyl- 37.5 19 0.00041 32.3 1.6 36 208-261 71-106 (191)
32 cd01823 SEST_like SEST_like. A 35.5 1.7E+02 0.0038 27.0 7.9 86 244-332 125-218 (259)
33 cd01822 Lysophospholipase_L1_l 35.2 18 0.00039 31.2 1.0 78 208-326 64-142 (177)
34 cd01827 sialate_O-acetylestera 35.0 19 0.00042 31.6 1.2 12 124-135 2-13 (188)
35 cd01830 XynE_like SGNH_hydrola 29.4 26 0.00055 31.6 1.0 56 208-277 74-129 (204)
36 cd01839 SGNH_arylesterase_like 28.5 27 0.00059 31.4 1.0 10 124-133 1-10 (208)
37 PF00185 OTCace: Aspartate/orn 26.8 45 0.00097 29.3 2.1 25 121-146 1-25 (158)
38 COG0621 MiaB 2-methylthioadeni 26.4 2.5E+02 0.0054 29.2 7.6 44 207-277 39-82 (437)
39 PF06462 Hyd_WA: Propeller; I 26.0 64 0.0014 20.6 2.1 20 266-285 8-28 (32)
40 cd01840 SGNH_hydrolase_yrhL_li 20.3 75 0.0016 27.1 2.2 72 208-330 50-121 (150)
41 PF00919 UPF0004: Uncharacteri 20.1 2.6E+02 0.0055 22.6 5.1 45 207-277 35-79 (98)
No 1
>PLN02629 powdery mildew resistance 5
Probab=100.00 E-value=2.2e-112 Score=839.58 Aligned_cols=327 Identities=45% Similarity=0.919 Sum_probs=300.5
Q ss_pred CCCCCCCcCccCceeeCCCCCCCCCC-CC-CCCcCcccccCCCCCcccccceeecCCCCCCCCCHHHHHHHHcCCeEEEE
Q 017027 51 RDSSRHCDFTSGKWVYDPSYPLYDSN-CP-YLSTAVSCQKNGRPDSDYQKWKWKPHACSIPRFDALKYLAKMRRKRIMLV 128 (379)
Q Consensus 51 ~~~~~~Cd~~~G~WV~d~~~PlY~~~-Cp-~i~~~~~C~~nGRpd~~y~~wrWqP~~C~lprfd~~~fl~~lrgK~i~FV 128 (379)
.++.+.||+|+|+||+|+++|+|+++ || ||++++||++|||||++|++|||||++|+||||||.+||++||||+|+||
T Consensus 47 ~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FV 126 (387)
T PLN02629 47 QANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFV 126 (387)
T ss_pred CCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEe
Confidence 46678999999999999999999998 99 99999999999999999999999999999999999999999999999999
Q ss_pred ecchhHHHHHHHHHhhcccCCCcceEEeecCCeeEEEEecCceEEEEEEccccccccCCCCCceeEEecccchhhcccCC
Q 017027 129 GDSIMRNQWESLVCLVQGVVPMGRKKVTYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILHLDLIEDNARYWRG 208 (379)
Q Consensus 129 GDSl~Rn~~~SL~clL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv~~~~~~~~~~~l~lD~~d~~~~~w~~ 208 (379)
||||+|||||||+|||++++|...+.+...++..+|+|++||+||+||||||||+.+..+ ..+.++||++|..++.|++
T Consensus 127 GDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~-~~~~l~LD~id~~a~~w~~ 205 (387)
T PLN02629 127 GDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQ-GKRVLKLEEISGNANAWRD 205 (387)
T ss_pred ccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCC-CceeEEecCcchhhhhhcc
Confidence 999999999999999999998766666667788999999999999999999999987653 4578999999988889999
Q ss_pred ccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCc---
Q 017027 209 ADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGW--- 285 (379)
Q Consensus 209 ~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W--- 285 (379)
+|||||||||||.+.+....+++++.|+.++++|++.+||++||+||++||++++++.+|+|||||+||+||+||+|
T Consensus 206 ~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~g 285 (387)
T PLN02629 206 ADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAG 285 (387)
T ss_pred CCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCC
Confidence 99999999999999887777889999999899999999999999999999999999999999999999999999999
Q ss_pred ------ccccCCccCcccCCCCch-HHHHHHHHHHHhcCCceEEeecccccccccCCCCCcccccCchhhhcCCCCCCCC
Q 017027 286 ------KCYKQRTPLAFFSHQHVP-EQLVVLKEVLRRMRFPVYLQDITTMSALRRDGHPSVYRRAMGQEERQHSKDFSSD 358 (379)
Q Consensus 286 ------~C~~~t~P~~~~~~~~~~-~~~~~~~~~~~~~~~~v~lLDit~ms~~R~D~HP~~y~~~~~~~~~~~~~~~~~D 358 (379)
+|+++|+|+.++++.+.. .+++++++++++++.+|+|||||+||++|||||||+|+++ .++++++++..++|
T Consensus 286 g~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~-~~~~~~~~p~~~~D 364 (387)
T PLN02629 286 ASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGD-LSPSQRANPDRSAD 364 (387)
T ss_pred CCCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCC-CchhhccCCCCCCC
Confidence 299999999987776544 5667999999999999999999999999999999999863 34555566677899
Q ss_pred cccccCCCcchHHHHHHHhhC
Q 017027 359 CSHWCLPGVPDSWNEMLSALL 379 (379)
Q Consensus 359 C~HWClPG~~D~WN~lL~~~L 379 (379)
|+||||||||||||||||++|
T Consensus 365 C~HWCLPGvpDTWNelL~a~L 385 (387)
T PLN02629 365 CSHWCLPGLPDTWNQLFYTAL 385 (387)
T ss_pred cccccCCCCCccHHHHHHHHH
Confidence 999999999999999999986
No 2
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=100.00 E-value=2.5e-49 Score=374.20 Aligned_cols=241 Identities=39% Similarity=0.727 Sum_probs=186.6
Q ss_pred CCCCCHHHHHHHHcCCeEEEEecchhHHHHHHHHHhhcccCC-----CcceEEeecCCeeEEEEecCceEEEEEEccccc
Q 017027 108 IPRFDALKYLAKMRRKRIMLVGDSIMRNQWESLVCLVQGVVP-----MGRKKVTYNGLSMAFHALDFETSIEFSWAPLLV 182 (379)
Q Consensus 108 lprfd~~~fl~~lrgK~i~FVGDSl~Rn~~~SL~clL~~~~~-----~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv 182 (379)
|++||+.++|++||||+|+|||||++||+|+||+|+|.+..+ +........+....+.++.+|++|+|+|+|||+
T Consensus 1 ~~~~d~~~cL~~lr~k~i~fiGDS~~Rq~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~p~l~ 80 (263)
T PF13839_consen 1 LPRFDARECLQRLRNKRIVFIGDSTTRQQYESLVCLLGPEVPSWQESPHSGIEFPNHRNFRYNFPDYNVTLSFYWDPFLV 80 (263)
T ss_pred CChhhHHHHHHHccCCEEEEEechhhHHHHHHHHHHHhccccccccccccccccccCCceEEeecCCCeEEEEecccccc
Confidence 689999999999999999999999999999999999998776 222222233456778899999999999999999
Q ss_pred cccCCCCCceeEEecccc-hhhcccC----CccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHH
Q 017027 183 ELMKGPENKRILHLDLIE-DNARYWR----GADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAK 257 (379)
Q Consensus 183 ~~~~~~~~~~~l~lD~~d-~~~~~w~----~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~ 257 (379)
+. +|.++ .....|. .+||||||+|+||.+.+....+ +++ .+++...+|+.+++++++
T Consensus 81 ~~-----------l~~~~~~~~~~~~~~~~~pdvvV~nsG~W~~~~~~~~~~-----~~~--~~~~~~~~y~~~l~~~~~ 142 (263)
T PF13839_consen 81 DQ-----------LDSIDEEIANNWPTSGARPDVVVINSGLWYLRRSGFIEW-----GDN--KEINPLEAYRNRLRTLAD 142 (263)
T ss_pred cc-----------ccccchhhhccccccccCCCEEEEEcchhhhhcchhccc-----CCC--cCcchHHHHHHHHHHHHH
Confidence 64 33333 2234555 7999999999999987532222 222 467889999999999999
Q ss_pred HHHhhCCCCC--cEEEEeecCCCCCCCCCc----ccccCCccCcccCCCCc--hHHHHHHHHHHHhcCCceEEeec-ccc
Q 017027 258 WIDLNIDPRR--TRVIFRSMSPRHNRENGW----KCYKQRTPLAFFSHQHV--PEQLVVLKEVLRRMRFPVYLQDI-TTM 328 (379)
Q Consensus 258 ~i~~~~~~~~--t~VffRt~sP~Hf~~g~W----~C~~~t~P~~~~~~~~~--~~~~~~~~~~~~~~~~~v~lLDi-t~m 328 (379)
++.+.+++.+ ++||||+++|+|+++++| .|. +......... .++++++.+++ +.+.++.+||| +.|
T Consensus 143 ~~~~~~~~~~~~~~v~~r~~~P~h~~~~~~~~gg~c~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ldi~~~~ 217 (263)
T PF13839_consen 143 WVRRLLDRSKPPTRVFWRTTSPVHFEGGDWNSGGSCN----PPRREEITNEQIDELNEALREAL-KKNSRVHLLDIFTML 217 (263)
T ss_pred HHHhhhccccccceEEEEecCCccccccccccCCCcC----cccccCCCHHHHHHHHHHHHHHh-hcCCCceeeeecchh
Confidence 9998776554 999999999999999999 564 1111111111 13555555555 23679999999 999
Q ss_pred ccccc-CCCCCcccccCchhhhcCCCCCCCCcccccCCCcchHHHHHHHhhC
Q 017027 329 SALRR-DGHPSVYRRAMGQEERQHSKDFSSDCSHWCLPGVPDSWNEMLSALL 379 (379)
Q Consensus 329 s~~R~-D~HP~~y~~~~~~~~~~~~~~~~~DC~HWClPG~~D~WN~lL~~~L 379 (379)
+.+|+ ||||++|+... .....||+|||+|||+|+||+||+++|
T Consensus 218 ~~~r~~d~H~~~~~~~~--------~~~~~Dc~Hw~~p~v~d~~~~lL~~~l 261 (263)
T PF13839_consen 218 SSFRPDDAHPGIYRNQW--------PRQPQDCLHWCLPGVIDTWNELLLNLL 261 (263)
T ss_pred hhccccccCcccccCCC--------CCCCCCCcCcCCCcHHHHHHHHHHHHh
Confidence 99999 99999998743 222579999999999999999999986
No 3
>PF14416 PMR5N: PMR5 N terminal Domain
Probab=99.93 E-value=1.6e-26 Score=167.36 Aligned_cols=54 Identities=56% Similarity=1.440 Sum_probs=52.0
Q ss_pred CCCCcCccCceeeCCCCCCCCCC-CCCCCcCcccccCCCCCcccccceeecCCCC
Q 017027 54 SRHCDFTSGKWVYDPSYPLYDSN-CPYLSTAVSCQKNGRPDSDYQKWKWKPHACS 107 (379)
Q Consensus 54 ~~~Cd~~~G~WV~d~~~PlY~~~-Cp~i~~~~~C~~nGRpd~~y~~wrWqP~~C~ 107 (379)
+++||+|+|+||+|+++|+|+++ ||||++++||++|||||++|++|||||++|+
T Consensus 1 e~~Cd~~~G~WV~D~~~PlY~~~~Cp~i~~~~nC~~nGRpD~~y~~wRWqP~~Cd 55 (55)
T PF14416_consen 1 EKRCDYFDGRWVPDPSYPLYTNSTCPFIDEGFNCQKNGRPDSDYLKWRWQPRGCD 55 (55)
T ss_pred CCccCcccCEEEeCCCCCccCCCCCCcCCCccchhhcCCCCCccceeeecCCCCC
Confidence 36899999999999999999999 9999999999999999999999999999996
No 4
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.58 E-value=4.5e-07 Score=81.29 Aligned_cols=97 Identities=15% Similarity=0.173 Sum_probs=64.3
Q ss_pred ccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCcccc
Q 017027 209 ADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKCY 288 (379)
Q Consensus 209 ~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~C~ 288 (379)
.||||||+|.|=.. +|.. ..++.|++.|.++...+.+-+ |+++++||.|++|.=-+ |.
T Consensus 51 ~DVIi~Ns~LWDl~--------ry~~--------~~~~~Y~~NL~~Lf~rLk~~l-p~~allIW~tt~Pv~~~-----~~ 108 (183)
T cd01842 51 LDLVIMNSCLWDLS--------RYQR--------NSMKTYRENLERLFSKLDSVL-PIECLIVWNTAMPVAEE-----IK 108 (183)
T ss_pred eeEEEEecceeccc--------ccCC--------CCHHHHHHHHHHHHHHHHhhC-CCccEEEEecCCCCCcC-----Cc
Confidence 49999999999432 2321 247899999999999988755 67899999999994211 21
Q ss_pred c-CCccCcc---cCCCCc-hHHHHHHHHHHHhcCCceEEeeccccc
Q 017027 289 K-QRTPLAF---FSHQHV-PEQLVVLKEVLRRMRFPVYLQDITTMS 329 (379)
Q Consensus 289 ~-~t~P~~~---~~~~~~-~~~~~~~~~~~~~~~~~v~lLDit~ms 329 (379)
+ .-.|--. .+.... .+.|.+.++++++ ..+.++|...-.
T Consensus 109 ggfl~~~~~~~~~~lr~dv~eaN~~A~~va~~--~~~dVlDLh~~f 152 (183)
T cd01842 109 GGFLLPELHDLSKSLRYDVLEGNFYSATLAKC--YGFDVLDLHYHF 152 (183)
T ss_pred CceeccccccccccchhHHHHHHHHHHHHHHH--cCceeeehHHHH
Confidence 1 1112111 111111 1678888888775 468889998876
No 5
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=96.71 E-value=0.009 Score=52.68 Aligned_cols=88 Identities=11% Similarity=0.041 Sum_probs=55.4
Q ss_pred CccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCccc
Q 017027 208 GADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKC 287 (379)
Q Consensus 208 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~C 287 (379)
.+|+||+..|.-=.. .. .-.+.|+..++++++.+.+. .++++||+-+..|...+.
T Consensus 51 ~pd~v~i~~G~ND~~----------~~--------~~~~~~~~~~~~l~~~~~~~--~p~~~vi~~~~~p~~~~~----- 105 (174)
T cd01841 51 NPSKVFLFLGTNDIG----------KE--------VSSNQFIKWYRDIIEQIREE--FPNTKIYLLSVLPVLEED----- 105 (174)
T ss_pred CCCEEEEEeccccCC----------CC--------CCHHHHHHHHHHHHHHHHHH--CCCCEEEEEeeCCcCccc-----
Confidence 579999988865211 00 02556788888888887663 357789999988844311
Q ss_pred ccCCccCcccCCCC--chHHHHHHHHHHHhcCCceEEeeccccc
Q 017027 288 YKQRTPLAFFSHQH--VPEQLVVLKEVLRRMRFPVYLQDITTMS 329 (379)
Q Consensus 288 ~~~t~P~~~~~~~~--~~~~~~~~~~~~~~~~~~v~lLDit~ms 329 (379)
. ...... ..+.+++++++.++. ++.++|++.+.
T Consensus 106 -----~--~~~~~~~~~~~~n~~l~~~a~~~--~~~~id~~~~~ 140 (174)
T cd01841 106 -----E--IKTRSNTRIQRLNDAIKELAPEL--GVTFIDLNDVL 140 (174)
T ss_pred -----c--cccCCHHHHHHHHHHHHHHHHHC--CCEEEEcHHHH
Confidence 0 000111 125778888776653 58899999874
No 6
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.14 E-value=0.088 Score=47.34 Aligned_cols=94 Identities=9% Similarity=-0.053 Sum_probs=56.9
Q ss_pred CccEEEEeccccccccccCCccceeecCc-eeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCcc
Q 017027 208 GADVLVFDSAHWWTHSEQWSSWDYYMEGK-SVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWK 286 (379)
Q Consensus 208 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~-~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~ 286 (379)
.+|+|||..|.+=.... ...+. .....-...+.|+..|+.+++.+.+ .+++|++-+..|.+...
T Consensus 59 ~pd~vii~~G~ND~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~lv~~~~~----~~~~vili~~pp~~~~~---- 123 (200)
T cd01829 59 KPDVVVVFLGANDRQDI-------RDGDGYLKFGSPEWEEEYRQRIDELLNVARA----KGVPVIWVGLPAMRSPK---- 123 (200)
T ss_pred CCCEEEEEecCCCCccc-------cCCCceeecCChhHHHHHHHHHHHHHHHHHh----CCCcEEEEcCCCCCChh----
Confidence 57999999998843211 00000 0000123467888999988887753 35679998887744210
Q ss_pred cccCCccCcccCCCCchHHHHHHHHHHHhcCCceEEeeccccc
Q 017027 287 CYKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMS 329 (379)
Q Consensus 287 C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLDit~ms 329 (379)
. . . ...+.+++++++.++ ..+.++|++.+.
T Consensus 124 ~-------~-~---~~~~~~~~~~~~a~~--~~~~~id~~~~~ 153 (200)
T cd01829 124 L-------S-A---DMVYLNSLYREEVAK--AGGEFVDVWDGF 153 (200)
T ss_pred H-------h-H---HHHHHHHHHHHHHHH--cCCEEEEhhHhh
Confidence 0 0 0 011567777777775 358999999875
No 7
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=95.79 E-value=0.026 Score=50.27 Aligned_cols=99 Identities=15% Similarity=0.130 Sum_probs=57.2
Q ss_pred CccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCc--
Q 017027 208 GADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGW-- 285 (379)
Q Consensus 208 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W-- 285 (379)
.+|+|||..|.-=.... +.. .. ...+.|+..++.+++.+.+. .++++||+-|..|.... .|
T Consensus 63 ~pd~vii~~G~ND~~~~----------~~~--~~-~~~~~~~~~~~~~i~~~~~~--~~~~~ii~~t~~~~~~~--~~~~ 125 (199)
T cd01838 63 QPDLVTIFFGANDAALP----------GQP--QH-VPLDEYKENLRKIVSHLKSL--SPKTKVILITPPPVDEE--AWEK 125 (199)
T ss_pred CceEEEEEecCccccCC----------CCC--Cc-ccHHHHHHHHHHHHHHHHhh--CCCCeEEEeCCCCCCHH--HHhh
Confidence 68999999987632111 000 00 12678889999999888763 25778999988774321 11
Q ss_pred ccccCCccCcccCCCCc----hHHHHHHHHHHHhcCCceEEeecccccc
Q 017027 286 KCYKQRTPLAFFSHQHV----PEQLVVLKEVLRRMRFPVYLQDITTMSA 330 (379)
Q Consensus 286 ~C~~~t~P~~~~~~~~~----~~~~~~~~~~~~~~~~~v~lLDit~ms~ 330 (379)
.| +......... .+++++++++.++ .++.++|++....
T Consensus 126 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~~~iD~~~~~~ 167 (199)
T cd01838 126 SL-----EDGGSQPGRTNELLKQYAEACVEVAEE--LGVPVIDLWTAMQ 167 (199)
T ss_pred hh-----ccccCCccccHHHHHHHHHHHHHHHHH--hCCcEEEHHHHHH
Confidence 01 0000111111 1466677777665 3588999987654
No 8
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=95.51 E-value=0.13 Score=45.38 Aligned_cols=97 Identities=10% Similarity=-0.004 Sum_probs=52.6
Q ss_pred CccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCccc
Q 017027 208 GADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKC 287 (379)
Q Consensus 208 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~C 287 (379)
.+|+|+|..|.-=.... .. .....+.|+..|+.+++.+.+. .+++.|++-+.-|. ....++
T Consensus 61 ~~d~v~l~~G~ND~~~~------~~--------~~~~~~~~~~~l~~~v~~~~~~--~~~~~ii~~~p~~~-~~~~~~-- 121 (191)
T cd01834 61 KPDVVSIMFGINDSFRG------FD--------DPVGLEKFKTNLRRLIDRLKNK--ESAPRIVLVSPIAY-EANEDP-- 121 (191)
T ss_pred CCCEEEEEeecchHhhc------cc--------ccccHHHHHHHHHHHHHHHHcc--cCCCcEEEECCccc-CCCCCC--
Confidence 47999998887632110 00 0123567888888888887642 34566777654441 111100
Q ss_pred ccCCccCcccCCCC-chHHHHHHHHHHHhcCCceEEeecccccc
Q 017027 288 YKQRTPLAFFSHQH-VPEQLVVLKEVLRRMRFPVYLQDITTMSA 330 (379)
Q Consensus 288 ~~~t~P~~~~~~~~-~~~~~~~~~~~~~~~~~~v~lLDit~ms~ 330 (379)
.|.... ... ..+.+++++++.++ .++.++|++....
T Consensus 122 ----~~~~~~-~~~~~~~~n~~l~~~a~~--~~~~~iD~~~~~~ 158 (191)
T cd01834 122 ----LPDGAE-YNANLAAYADAVRELAAE--NGVAFVDLFTPMK 158 (191)
T ss_pred ----CCChHH-HHHHHHHHHHHHHHHHHH--cCCeEEecHHHHH
Confidence 011000 000 01456777777664 4689999998754
No 9
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.79 E-value=1.6 Score=42.98 Aligned_cols=166 Identities=17% Similarity=0.158 Sum_probs=85.4
Q ss_pred HHHHc-CCeEEEEecchhHHHHHHHHHhhcccCCCcceEEeecCCeeEEEEecCceEEEEEEccccccccCCCCCceeEE
Q 017027 117 LAKMR-RKRIMLVGDSIMRNQWESLVCLVQGVVPMGRKKVTYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILH 195 (379)
Q Consensus 117 l~~lr-gK~i~FVGDSl~Rn~~~SL~clL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv~~~~~~~~~~~l~ 195 (379)
.+.+| +++|.|||||+++..-+.|..-|.+.-. -+..+.+.+.+.+...+| |-|.-=+.
T Consensus 110 ~~k~~~a~kvLvvGDslm~gla~gl~~al~t~~~--i~i~~~sn~SSGlvr~dY-----fdWpk~i~------------- 169 (354)
T COG2845 110 AAKSRDADKVLVVGDSLMQGLAEGLDKALATSPG--ITIVTRSNGSSGLVRDDY-----FDWPKAIP------------- 169 (354)
T ss_pred hhhCCCCCEEEEechHHhhhhHHHHHHHhccCCC--cEEEEeecCCCCcccccc-----cccHHHHH-------------
Confidence 34444 8899999999999988888887744211 111111111111111111 22321111
Q ss_pred ecccchhhcccCCccEEEEeccccccccccCCccceeecCcee-ccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEee
Q 017027 196 LDLIEDNARYWRGADVLVFDSAHWWTHSEQWSSWDYYMEGKSV-YKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRS 274 (379)
Q Consensus 196 lD~~d~~~~~w~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~-~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt 274 (379)
+.++++ ..+.+||+..|.-= ++++...+... ...-.....|++-+..+++.+.. .+..|+|-.
T Consensus 170 -~~l~~~----~~~a~vVV~lGaND-------~q~~~~gd~~~kf~S~~W~~eY~kRvd~~l~ia~~----~~~~V~WvG 233 (354)
T COG2845 170 -ELLDKH----PKPAAVVVMLGAND-------RQDFKVGDVYEKFRSDEWTKEYEKRVDAILKIAHT----HKVPVLWVG 233 (354)
T ss_pred -HHHHhc----CCccEEEEEecCCC-------HHhcccCCeeeecCchHHHHHHHHHHHHHHHHhcc----cCCcEEEee
Confidence 112211 24567777777641 12222111111 12346788999999999997643 567799999
Q ss_pred cCCCCCCCCCcccccCCccCcccCCCCch-HHHHHHHHHHHhcCCceEEeecccccccccCCC
Q 017027 275 MSPRHNRENGWKCYKQRTPLAFFSHQHVP-EQLVVLKEVLRRMRFPVYLQDITTMSALRRDGH 336 (379)
Q Consensus 275 ~sP~Hf~~g~W~C~~~t~P~~~~~~~~~~-~~~~~~~~~~~~~~~~v~lLDit~ms~~R~D~H 336 (379)
+.| |+. .+..... -.|++.+++..+ .+-+++|||+.-..=+-.|
T Consensus 234 mP~--~r~--------------~~l~~dm~~ln~iy~~~vE~--~~gk~i~i~d~~v~e~G~~ 278 (354)
T COG2845 234 MPP--FRK--------------KKLNADMVYLNKIYSKAVEK--LGGKFIDIWDGFVDEGGKD 278 (354)
T ss_pred CCC--ccc--------------cccchHHHHHHHHHHHHHHH--hCCeEEEecccccccCCce
Confidence 987 321 0111100 245555555543 3446778876544444333
No 10
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=88.20 E-value=4.3 Score=35.84 Aligned_cols=105 Identities=10% Similarity=0.050 Sum_probs=61.0
Q ss_pred CccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCccc
Q 017027 208 GADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKC 287 (379)
Q Consensus 208 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~C 287 (379)
.+|+|||+.|.==. +... ....+.|+..++.+++.+.+. .++++||+-|..|......
T Consensus 67 ~pd~Vii~~G~ND~----------~~~~------~~~~~~~~~~l~~li~~i~~~--~~~~~iil~t~~p~~~~~~---- 124 (188)
T cd01827 67 NPNIVIIKLGTNDA----------KPQN------WKYKDDFKKDYETMIDSFQAL--PSKPKIYICYPIPAYYGDG---- 124 (188)
T ss_pred CCCEEEEEcccCCC----------CCCC------CccHHHHHHHHHHHHHHHHHH--CCCCeEEEEeCCcccccCC----
Confidence 57999999986521 1000 012457888888888887663 3567888888777442211
Q ss_pred ccCCccCcccCCCCchHHHHHHHHHHHhcCCceEEeeccccccc----ccCC-CCCcccc
Q 017027 288 YKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMSAL----RRDG-HPSVYRR 342 (379)
Q Consensus 288 ~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLDit~ms~~----R~D~-HP~~y~~ 342 (379)
.+..... ...+.++.++++.++ ..+.++|+...... -+|+ ||+..+.
T Consensus 125 ----~~~~~~~--~~~~~~~~~~~~a~~--~~~~~vD~~~~~~~~~~~~~Dg~Hpn~~G~ 176 (188)
T cd01827 125 ----GFINDNI--IKKEIQPMIDKIAKK--LNLKLIDLHTPLKGKPELVPDWVHPNEKGA 176 (188)
T ss_pred ----CccchHH--HHHHHHHHHHHHHHH--cCCcEEEccccccCCccccCCCCCcCHHHH
Confidence 1110000 001356666666664 46788898876543 3476 8876553
No 11
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=87.55 E-value=2.9 Score=36.54 Aligned_cols=86 Identities=14% Similarity=0.080 Sum_probs=51.2
Q ss_pred CccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCccc
Q 017027 208 GADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKC 287 (379)
Q Consensus 208 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~C 287 (379)
.+|+||+..|.== ... ..+ .+.|+..++++++.+.+.. +++++++-+..|.-.
T Consensus 50 ~p~~vvi~~G~ND----------~~~-------~~~-~~~~~~~~~~lv~~i~~~~--~~~~iil~~~~p~~~------- 102 (171)
T cd04502 50 QPRRVVLYAGDND----------LAS-------GRT-PEEVLRDFRELVNRIRAKL--PDTPIAIISIKPSPA------- 102 (171)
T ss_pred CCCEEEEEEecCc----------ccC-------CCC-HHHHHHHHHHHHHHHHHHC--CCCcEEEEEecCCCc-------
Confidence 4789999887541 110 011 6678888888888887643 466788887665211
Q ss_pred ccCCccCcccCCCCchHHHHHHHHHHHhcCCceEEeecccc
Q 017027 288 YKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTM 328 (379)
Q Consensus 288 ~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLDit~m 328 (379)
..... ....+.++.++++..+ ..++.++|++..
T Consensus 103 ---~~~~~----~~~~~~n~~~~~~a~~-~~~v~~vD~~~~ 135 (171)
T cd04502 103 ---RWALR----PKIRRFNALLKELAET-RPNLTYIDVASP 135 (171)
T ss_pred ---chhhH----HHHHHHHHHHHHHHhc-CCCeEEEECcHH
Confidence 00000 0011466676666543 247899998874
No 12
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=86.56 E-value=21 Score=31.07 Aligned_cols=97 Identities=11% Similarity=0.077 Sum_probs=52.5
Q ss_pred ccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCcccc
Q 017027 209 ADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKCY 288 (379)
Q Consensus 209 ~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~C~ 288 (379)
+|+|||+.|.-=... .. ..-...|+.+++.+++.+.+. .+++++|+-+.-+....
T Consensus 56 pd~vii~~G~ND~~~----------~~------~~~~~~~~~~~~~li~~i~~~--~p~~~i~~~~~~~~~~~------- 110 (169)
T cd01831 56 PDLVVINLGTNDFST----------GN------NPPGEDFTNAYVEFIEELRKR--YPDAPIVLMLGPMLFGP------- 110 (169)
T ss_pred CCEEEEECCcCCCCC----------CC------CCCHHHHHHHHHHHHHHHHHH--CCCCeEEEEecCccccc-------
Confidence 799999998652211 00 012456778888888877663 35666766543221100
Q ss_pred cCCccCcccCCCCchHHHHHHHHHHHhc-CCceEEeecccccc---cccCCCCCccc
Q 017027 289 KQRTPLAFFSHQHVPEQLVVLKEVLRRM-RFPVYLQDITTMSA---LRRDGHPSVYR 341 (379)
Q Consensus 289 ~~t~P~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lLDit~ms~---~R~D~HP~~y~ 341 (379)
. ...+..+.+++++++. ..++.++|...... +--..||+..+
T Consensus 111 ---~--------~~~~~~~~~~~~~~~~~~~~v~~id~~~~~~~~~~~DgiHPn~~G 156 (169)
T cd01831 111 ---Y--------GTEEEIKRVAEAFKDQKSKKVHYFDTPGILQHNDIGCDWHPTVAG 156 (169)
T ss_pred ---c--------ccHHHHHHHHHHHHhcCCceEEEEecccccCCCCcCCCCCCCHHH
Confidence 0 0023445566666543 24689999876432 11235666444
No 13
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=81.59 E-value=7.9 Score=34.26 Aligned_cols=105 Identities=16% Similarity=0.049 Sum_probs=60.4
Q ss_pred CccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCccc
Q 017027 208 GADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKC 287 (379)
Q Consensus 208 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~C 287 (379)
.+|+|||..|.-=. .. ....+.|+..++++++.+.+. .+++.||+-+..|.....
T Consensus 67 ~pd~Vii~~G~ND~----------~~--------~~~~~~~~~~l~~li~~i~~~--~~~~~iiv~~~p~~~~~~----- 121 (191)
T cd01836 67 RFDVAVISIGVNDV----------TH--------LTSIARWRKQLAELVDALRAK--FPGARVVVTAVPPLGRFP----- 121 (191)
T ss_pred CCCEEEEEecccCc----------CC--------CCCHHHHHHHHHHHHHHHHhh--CCCCEEEEECCCCcccCC-----
Confidence 57999999886421 10 012567888888888888763 357789998876633210
Q ss_pred ccCCccCcccCCCC--chHHHHHHHHHHHhcCCceEEeeccccc---ccccC-CCCCccc
Q 017027 288 YKQRTPLAFFSHQH--VPEQLVVLKEVLRRMRFPVYLQDITTMS---ALRRD-GHPSVYR 341 (379)
Q Consensus 288 ~~~t~P~~~~~~~~--~~~~~~~~~~~~~~~~~~v~lLDit~ms---~~R~D-~HP~~y~ 341 (379)
..|........ ..+.+++++++.++. ..+.++|++... .+-.| -||+..+
T Consensus 122 ---~~~~~~~~~~~~~~~~~n~~~~~~a~~~-~~~~~id~~~~~~~~~~~~DglHpn~~G 177 (191)
T cd01836 122 ---ALPQPLRWLLGRRARLLNRALERLASEA-PRVTLLPATGPLFPALFASDGFHPSAAG 177 (191)
T ss_pred ---CCcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEecCCccchhhccCCCCCCChHH
Confidence 01100000000 013566666665542 379999999874 34445 6777544
No 14
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=70.86 E-value=33 Score=29.55 Aligned_cols=88 Identities=9% Similarity=0.018 Sum_probs=55.3
Q ss_pred CccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCccc
Q 017027 208 GADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKC 287 (379)
Q Consensus 208 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~C 287 (379)
.+|+||+..|.-=. . .+ . -.+.|++.+.++++.+.+. .++++|++-+..|..-...
T Consensus 48 ~pd~vvl~~G~ND~----------~-~~------~-~~~~~~~~l~~li~~~~~~--~~~~~vi~~~~~p~~~~~~---- 103 (169)
T cd01828 48 QPKAIFIMIGINDL----------A-QG------T-SDEDIVANYRTILEKLRKH--FPNIKIVVQSILPVGELKS---- 103 (169)
T ss_pred CCCEEEEEeeccCC----------C-CC------C-CHHHHHHHHHHHHHHHHHH--CCCCeEEEEecCCcCccCc----
Confidence 46999999985411 0 00 1 2467888888888887653 2567899999887541100
Q ss_pred ccCCccCcccCCCCchHHHHHHHHHHHhcCCceEEeecccccc
Q 017027 288 YKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMSA 330 (379)
Q Consensus 288 ~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLDit~ms~ 330 (379)
... ....++++.++++.++ .++.++|+++...
T Consensus 104 --~~~-------~~~~~~n~~l~~~a~~--~~~~~id~~~~~~ 135 (169)
T cd01828 104 --IPN-------EQIEELNRQLAQLAQQ--EGVTFLDLWAVFT 135 (169)
T ss_pred --CCH-------HHHHHHHHHHHHHHHH--CCCEEEechhhhc
Confidence 000 0012577778877774 5788999987653
No 15
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=68.84 E-value=65 Score=27.23 Aligned_cols=99 Identities=14% Similarity=0.127 Sum_probs=61.1
Q ss_pred CccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCccc
Q 017027 208 GADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKC 287 (379)
Q Consensus 208 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~C 287 (379)
.+|+||++.|.-= .... .-.+.|+..++++++.+.+. .+++.+++-+..|.-..
T Consensus 40 ~pd~vvi~~G~ND----------~~~~--------~~~~~~~~~~~~~i~~i~~~--~p~~~ii~~~~~p~~~~------ 93 (157)
T cd01833 40 KPDVVLLHLGTND----------LVLN--------RDPDTAPDRLRALIDQMRAA--NPDVKIIVATLIPTTDA------ 93 (157)
T ss_pred CCCEEEEeccCcc----------cccC--------CCHHHHHHHHHHHHHHHHHh--CCCeEEEEEeCCCCCCc------
Confidence 5799999998651 1111 12567888888998888764 35677888777662211
Q ss_pred ccCCccCcccCCCCchHHHHHHHHHHHhc---CCceEEeecccccc---ccc-CCCCCccc
Q 017027 288 YKQRTPLAFFSHQHVPEQLVVLKEVLRRM---RFPVYLQDITTMSA---LRR-DGHPSVYR 341 (379)
Q Consensus 288 ~~~t~P~~~~~~~~~~~~~~~~~~~~~~~---~~~v~lLDit~ms~---~R~-D~HP~~y~ 341 (379)
. . -....++++.++++.++. +.++.++|+.+... +.. ..||+..+
T Consensus 94 ----~-~----~~~~~~~n~~l~~~~~~~~~~~~~v~~vd~~~~~~~~~~~~Dg~Hpn~~G 145 (157)
T cd01833 94 ----S-G----NARIAEYNAAIPGVVADLRTAGSPVVLVDMSTGYTTADDLYDGLHPNDQG 145 (157)
T ss_pred ----c-h----hHHHHHHHHHHHHHHHHHhcCCCCEEEEecCCCCCCcccccCCCCCchHH
Confidence 0 0 000125677777776643 35799999998863 444 44766544
No 16
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=67.56 E-value=55 Score=28.45 Aligned_cols=93 Identities=6% Similarity=0.058 Sum_probs=56.5
Q ss_pred CccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCccc
Q 017027 208 GADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKC 287 (379)
Q Consensus 208 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~C 287 (379)
.+|+|||..|.==... .+ --.+.|+..++++++.+.+. .++++|++-+..|.-+..+. +
T Consensus 56 ~pd~Vii~~G~ND~~~----------~~-------~~~~~~~~~~~~li~~i~~~--~~~~~iv~~~~~~~~~~~~~--~ 114 (189)
T cd01825 56 PPDLVILSYGTNEAFN----------KQ-------LNASEYRQQLREFIKRLRQI--LPNASILLVGPPDSLQKTGA--G 114 (189)
T ss_pred CCCEEEEECCCccccc----------CC-------CCHHHHHHHHHHHHHHHHHH--CCCCeEEEEcCCchhccCCC--C
Confidence 4799999998641100 00 01567889999999988763 35788999888764322110 0
Q ss_pred ccCCccCcccCCCCchHHHHHHHHHHHhcCCceEEeecccccc
Q 017027 288 YKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMSA 330 (379)
Q Consensus 288 ~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLDit~ms~ 330 (379)
.+.. .....+.++.++++.++. .+.++|+.....
T Consensus 115 ----~~~~---~~~~~~~~~~~~~~a~~~--~v~~vd~~~~~~ 148 (189)
T cd01825 115 ----RWRT---PPGLDAVIAAQRRVAKEE--GIAFWDLYAAMG 148 (189)
T ss_pred ----Cccc---CCcHHHHHHHHHHHHHHc--CCeEEeHHHHhC
Confidence 0000 011125677777777753 488999988754
No 17
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=66.37 E-value=62 Score=26.76 Aligned_cols=93 Identities=14% Similarity=0.103 Sum_probs=54.1
Q ss_pred CCccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCcc
Q 017027 207 RGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWK 286 (379)
Q Consensus 207 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~ 286 (379)
..+|+||+..|..-..... ......+...++.+++.+.+ ..++++|++-+..|.....
T Consensus 64 ~~~d~vil~~G~ND~~~~~----------------~~~~~~~~~~~~~~i~~~~~--~~~~~~vv~~~~~~~~~~~---- 121 (187)
T cd00229 64 DKPDLVIIELGTNDLGRGG----------------DTSIDEFKANLEELLDALRE--RAPGAKVILITPPPPPPRE---- 121 (187)
T ss_pred CCCCEEEEEeccccccccc----------------ccCHHHHHHHHHHHHHHHHH--HCCCCcEEEEeCCCCCCCc----
Confidence 4589999999988542210 11244566666666666654 2456778887777733210
Q ss_pred cccCCccCcccCCCC-chHHHHHHHHHHHhcC--CceEEeeccccccc
Q 017027 287 CYKQRTPLAFFSHQH-VPEQLVVLKEVLRRMR--FPVYLQDITTMSAL 331 (379)
Q Consensus 287 C~~~t~P~~~~~~~~-~~~~~~~~~~~~~~~~--~~v~lLDit~ms~~ 331 (379)
. .... ....++.++++.+..+ ..+.++|+......
T Consensus 122 -----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 159 (187)
T cd00229 122 -----G-----LLGRALPRYNEAIKAVAAENPAPSGVDLVDLAALLGD 159 (187)
T ss_pred -----h-----hhHHHHHHHHHHHHHHHHHcCCCcceEEEEhhhhhCC
Confidence 0 0000 1145666666666532 14888999987654
No 18
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=65.43 E-value=32 Score=30.02 Aligned_cols=90 Identities=11% Similarity=0.066 Sum_probs=52.7
Q ss_pred CccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCccc
Q 017027 208 GADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKC 287 (379)
Q Consensus 208 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~C 287 (379)
.+|+|||..|.==. .. + ..-.+.|+..++.+++.+.. +++.||+-+..|..
T Consensus 67 ~~d~vii~~G~ND~----------~~-~------~~~~~~~~~~~~~~i~~i~~----~~~~vil~~~~~~~-------- 117 (185)
T cd01832 67 RPDLVTLLAGGNDI----------LR-P------GTDPDTYRADLEEAVRRLRA----AGARVVVFTIPDPA-------- 117 (185)
T ss_pred CCCEEEEecccccc----------cc-C------CCCHHHHHHHHHHHHHHHHh----CCCEEEEecCCCcc--------
Confidence 67999999884311 10 0 11255788888888888762 45678887766530
Q ss_pred ccCCccCcccCCCCchHHHHHHHHHHHhcCCceEEeecccccc
Q 017027 288 YKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMSA 330 (379)
Q Consensus 288 ~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLDit~ms~ 330 (379)
...|+.........+.+++++++.++ ..+.++|++.+..
T Consensus 118 --~~~~~~~~~~~~~~~~n~~l~~~a~~--~~v~~vd~~~~~~ 156 (185)
T cd01832 118 --VLEPFRRRVRARLAAYNAVIRAVAAR--YGAVHVDLWEHPE 156 (185)
T ss_pred --ccchhHHHHHHHHHHHHHHHHHHHHH--cCCEEEecccCcc
Confidence 11222111000012467777777765 4688999988754
No 19
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=65.38 E-value=43 Score=29.23 Aligned_cols=90 Identities=12% Similarity=0.125 Sum_probs=52.7
Q ss_pred CccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCccc
Q 017027 208 GADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKC 287 (379)
Q Consensus 208 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~C 287 (379)
.+|+||+..|..=... + ...+.|.+.++.+++.+.+ .+..+|+-+..|.-- ..|
T Consensus 59 ~~d~v~i~~G~ND~~~-----------~-------~~~~~~~~~~~~li~~~~~----~~~~~il~~~~p~~~--~~~-- 112 (183)
T cd04501 59 KPAVVIIMGGTNDIIV-----------N-------TSLEMIKDNIRSMVELAEA----NGIKVILASPLPVDD--YPW-- 112 (183)
T ss_pred CCCEEEEEeccCcccc-----------C-------CCHHHHHHHHHHHHHHHHH----CCCcEEEEeCCCcCc--ccc--
Confidence 4799999998772110 0 1255788888888888754 345688888777221 111
Q ss_pred ccCCccCcccCCCC-chHHHHHHHHHHHhcCCceEEeecccccc
Q 017027 288 YKQRTPLAFFSHQH-VPEQLVVLKEVLRRMRFPVYLQDITTMSA 330 (379)
Q Consensus 288 ~~~t~P~~~~~~~~-~~~~~~~~~~~~~~~~~~v~lLDit~ms~ 330 (379)
.|-. ..... ..+.++.++++.++ .++.++|+++...
T Consensus 113 ----~~~~-~~~~~~~~~~n~~~~~~a~~--~~v~~vd~~~~~~ 149 (183)
T cd04501 113 ----KPQW-LRPANKLKSLNRWLKDYARE--NGLLFLDFYSPLL 149 (183)
T ss_pred ----chhh-cchHHHHHHHHHHHHHHHHH--cCCCEEechhhhh
Confidence 0000 00000 11467777777765 3688999998644
No 20
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=62.37 E-value=23 Score=31.64 Aligned_cols=76 Identities=12% Similarity=0.021 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHHHHHHHhhCCCCCcEEEEeec-CCCCCCCCCcccccCCccCcccCCCCchHHHHHHHHHHHhcCCceEE
Q 017027 244 PMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSM-SPRHNRENGWKCYKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYL 322 (379)
Q Consensus 244 ~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~-sP~Hf~~g~W~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~v~l 322 (379)
..+.|++.|+.+++.+.+. .++++|++-++ .|.- ...|..........+++++++++.++. .++.+
T Consensus 100 ~~~~~~~~l~~~i~~ir~~--~p~~~Ivv~~~~~p~~----------~~~~~~~~~~~~~~~~n~~~~~~a~~~-~~v~~ 166 (204)
T cd04506 100 AEETYQNNLKKIFKEIRKL--NPDAPIFLVGLYNPFY----------VYFPNITEINDIVNDWNEASQKLASQY-KNAYF 166 (204)
T ss_pred HHHHHHHHHHHHHHHHHHH--CCCCeEEEEecCCccc----------cccchHHHHHHHHHHHHHHHHHHHHhC-CCeEE
Confidence 3567999999999988763 34667777664 2311 001100000000014566666666542 35999
Q ss_pred eecccccccc
Q 017027 323 QDITTMSALR 332 (379)
Q Consensus 323 LDit~ms~~R 332 (379)
+|+.+++...
T Consensus 167 vd~~~~~~~~ 176 (204)
T cd04506 167 VPIFDLFSDG 176 (204)
T ss_pred EehHHhhcCC
Confidence 9999876644
No 21
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=53.87 E-value=98 Score=26.96 Aligned_cols=29 Identities=14% Similarity=0.029 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHhhCCCCCcEEEEeecCC
Q 017027 247 AYEKGLTTWAKWIDLNIDPRRTRVIFRSMSP 277 (379)
Q Consensus 247 ayr~al~t~~~~i~~~~~~~~t~VffRt~sP 277 (379)
.|+..++.+++.|.+. .+++.|++-+..|
T Consensus 75 ~~~~~~~~~i~~i~~~--~p~~~iil~~~~~ 103 (177)
T cd01844 75 MVRERLGPLVKGLRET--HPDTPILLVSPRY 103 (177)
T ss_pred HHHHHHHHHHHHHHHH--CcCCCEEEEecCC
Confidence 6778888888888764 3467788877665
No 22
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=45.87 E-value=76 Score=28.73 Aligned_cols=100 Identities=14% Similarity=0.030 Sum_probs=56.1
Q ss_pred CccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCccc
Q 017027 208 GADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKC 287 (379)
Q Consensus 208 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~C 287 (379)
.+|+|||..|.== ... + . -.+.|...++.+++.+.+. .+++.|++-+..|.....
T Consensus 89 ~pd~VvI~~G~ND----------~~~-~------~-~~~~~~~~l~~ii~~l~~~--~P~~~Iil~~~~p~~~~~----- 143 (214)
T cd01820 89 NPKVVVLLIGTNN----------IGH-T------T-TAEEIAEGILAIVEEIREK--LPNAKILLLGLLPRGQNP----- 143 (214)
T ss_pred CCCEEEEEecccc----------cCC-C------C-CHHHHHHHHHHHHHHHHHH--CCCCeEEEEeccCCCCCc-----
Confidence 4799999888641 110 0 0 2456677788888877653 356778888887743210
Q ss_pred ccCCccCcccCCCCchHHHHHHHHHHHhcCCceEEeecccccc---------cccCC-CCCccc
Q 017027 288 YKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMSA---------LRRDG-HPSVYR 341 (379)
Q Consensus 288 ~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLDit~ms~---------~R~D~-HP~~y~ 341 (379)
.++.. ...+.++.+++..++ ..++.++|++.... +-.|| ||+..+
T Consensus 144 ----~~~~~----~~~~~n~~l~~~~~~-~~~v~~vd~~~~~~~~~g~~~~~~~~DGlHpn~~G 198 (214)
T cd01820 144 ----NPLRE----RNAQVNRLLAVRYDG-LPNVTFLDIDKGFVQSDGTISHHDMPDYLHLTAAG 198 (214)
T ss_pred ----hhHHH----HHHHHHHHHHHHhcC-CCCEEEEeCchhhcccCCCcCHhhcCCCCCCCHHH
Confidence 00000 001355555544432 24799999998642 12366 777554
No 23
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=45.20 E-value=17 Score=33.17 Aligned_cols=16 Identities=31% Similarity=0.511 Sum_probs=13.2
Q ss_pred CCeEEEEecchhHHHH
Q 017027 122 RKRIMLVGDSIMRNQW 137 (379)
Q Consensus 122 gK~i~FVGDSl~Rn~~ 137 (379)
..+|+|+|||++..+.
T Consensus 32 ~~~iv~lGDSit~g~~ 47 (214)
T cd01820 32 EPDVVFIGDSITQNWE 47 (214)
T ss_pred CCCEEEECchHhhhhc
Confidence 4589999999999743
No 24
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=45.05 E-value=1.6e+02 Score=26.03 Aligned_cols=92 Identities=13% Similarity=0.146 Sum_probs=53.9
Q ss_pred CCccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCC-CCCCCCc
Q 017027 207 RGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPR-HNRENGW 285 (379)
Q Consensus 207 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~-Hf~~g~W 285 (379)
+.+|+|||..|..=.... ... .-...+.|+..|+++++.+.+. +..+|+-|..|. .+.
T Consensus 64 ~~pdlVii~~G~ND~~~~----------~~~---~~~~~~~~~~nl~~ii~~~~~~----~~~~il~tp~~~~~~~---- 122 (198)
T cd01821 64 KPGDYVLIQFGHNDQKPK----------DPE---YTEPYTTYKEYLRRYIAEARAK----GATPILVTPVTRRTFD---- 122 (198)
T ss_pred CCCCEEEEECCCCCCCCC----------CCC---CCCcHHHHHHHHHHHHHHHHHC----CCeEEEECCccccccC----
Confidence 468999999997632110 000 0113577999999999887652 456777665541 111
Q ss_pred ccccCCccCcccCCCCchHHHHHHHHHHHhcCCceEEeeccccc
Q 017027 286 KCYKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMS 329 (379)
Q Consensus 286 ~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLDit~ms 329 (379)
.+ ... .......+++++++.++. .+.++|++.+.
T Consensus 123 ~~----~~~----~~~~~~~~~~~~~~a~~~--~~~~vD~~~~~ 156 (198)
T cd01821 123 EG----GKV----EDTLGDYPAAMRELAAEE--GVPLIDLNAAS 156 (198)
T ss_pred CC----Ccc----cccchhHHHHHHHHHHHh--CCCEEecHHHH
Confidence 01 000 001125788888888763 57788988764
No 25
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=43.95 E-value=9.7 Score=33.37 Aligned_cols=12 Identities=42% Similarity=0.606 Sum_probs=10.4
Q ss_pred eEEEEecchhHH
Q 017027 124 RIMLVGDSIMRN 135 (379)
Q Consensus 124 ~i~FVGDSl~Rn 135 (379)
||+|+|||++-.
T Consensus 1 ~iv~~GDS~t~g 12 (189)
T cd01825 1 RIAQLGDSHIAG 12 (189)
T ss_pred CeeEecCccccc
Confidence 689999999974
No 26
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=43.48 E-value=12 Score=32.93 Aligned_cols=13 Identities=23% Similarity=0.332 Sum_probs=11.4
Q ss_pred eEEEEecchhHHH
Q 017027 124 RIMLVGDSIMRNQ 136 (379)
Q Consensus 124 ~i~FVGDSl~Rn~ 136 (379)
+|+|+|||++...
T Consensus 1 ~iv~~GDSit~G~ 13 (177)
T cd01844 1 PWVFYGTSISQGA 13 (177)
T ss_pred CEEEEeCchhcCc
Confidence 5899999999874
No 27
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=41.77 E-value=13 Score=33.05 Aligned_cols=92 Identities=17% Similarity=0.050 Sum_probs=51.2
Q ss_pred CCccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCcc
Q 017027 207 RGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWK 286 (379)
Q Consensus 207 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~ 286 (379)
..+|+|||..|.==.... .+.. .....+.|+..++.+++.+.. ++.|++-+..|.-
T Consensus 68 ~~pd~V~i~~G~ND~~~~---------~~~~---~~~~~~~~~~~~~~ii~~~~~-----~~~vi~~~~~p~~------- 123 (193)
T cd01835 68 NVPNRLVLSVGLNDTARG---------GRKR---PQLSARAFLFGLNQLLEEAKR-----LVPVLVVGPTPVD------- 123 (193)
T ss_pred CCCCEEEEEecCcccccc---------cCcc---cccCHHHHHHHHHHHHHHHhc-----CCcEEEEeCCCcc-------
Confidence 367999999986521110 0000 012256788888888876542 4568887776621
Q ss_pred cccCCccCcccCCCCchHHHHHHHHHHHhcCCceEEeeccccc
Q 017027 287 CYKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMS 329 (379)
Q Consensus 287 C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLDit~ms 329 (379)
....|..+. ...+.++.++++.++ ..+.++|++...
T Consensus 124 --~~~~~~~~~---~~~~~n~~~~~~a~~--~~~~~vd~~~~~ 159 (193)
T cd01835 124 --EAKMPYSNR---RIARLETAFAEVCLR--RDVPFLDTFTPL 159 (193)
T ss_pred --ccccchhhH---HHHHHHHHHHHHHHH--cCCCeEeCccch
Confidence 011121000 011567777777765 367889998653
No 28
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=40.15 E-value=12 Score=32.70 Aligned_cols=11 Identities=45% Similarity=0.712 Sum_probs=9.9
Q ss_pred eEEEEecchhH
Q 017027 124 RIMLVGDSIMR 134 (379)
Q Consensus 124 ~i~FVGDSl~R 134 (379)
||+|+|||++.
T Consensus 1 ~i~~~GDSit~ 11 (185)
T cd01832 1 RYVALGDSITE 11 (185)
T ss_pred CeeEecchhhc
Confidence 58999999995
No 29
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=37.57 E-value=26 Score=28.69 Aligned_cols=22 Identities=23% Similarity=0.471 Sum_probs=16.9
Q ss_pred HHHHHHHcCCeEEEEecchhHH
Q 017027 114 LKYLAKMRRKRIMLVGDSIMRN 135 (379)
Q Consensus 114 ~~fl~~lrgK~i~FVGDSl~Rn 135 (379)
+++++..-++++++||||--.-
T Consensus 56 ~~i~~~fP~~kfiLIGDsgq~D 77 (100)
T PF09949_consen 56 ERILRDFPERKFILIGDSGQHD 77 (100)
T ss_pred HHHHHHCCCCcEEEEeeCCCcC
Confidence 4466666799999999997654
No 30
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=37.57 E-value=1.4e+02 Score=24.93 Aligned_cols=94 Identities=16% Similarity=0.113 Sum_probs=54.8
Q ss_pred CCccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCcc
Q 017027 207 RGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWK 286 (379)
Q Consensus 207 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~ 286 (379)
..+|+|||..|.-=... +.. .......|+.+|+++++.+.. .+.|++-+..|.......+.
T Consensus 60 ~~~d~vvi~~G~ND~~~-----------~~~---~~~~~~~~~~~l~~~i~~~~~-----~~~vi~~~~~~~~~~~~~~~ 120 (179)
T PF13472_consen 60 PKPDLVVISFGTNDVLN-----------GDE---NDTSPEQYEQNLRRIIEQLRP-----HGPVILVSPPPRGPDPRDPK 120 (179)
T ss_dssp TTCSEEEEE--HHHHCT-----------CTT---CHHHHHHHHHHHHHHHHHHHT-----TSEEEEEE-SCSSSSTTTTH
T ss_pred CCCCEEEEEcccccccc-----------ccc---ccccHHHHHHHHHHHHHhhcc-----cCcEEEecCCCccccccccc
Confidence 46899999998642111 100 123466788888888887643 22788888888665433210
Q ss_pred cccCCccCcccCCCC-chHHHHHHHHHHHhcCCceEEeecccccc
Q 017027 287 CYKQRTPLAFFSHQH-VPEQLVVLKEVLRRMRFPVYLQDITTMSA 330 (379)
Q Consensus 287 C~~~t~P~~~~~~~~-~~~~~~~~~~~~~~~~~~v~lLDit~ms~ 330 (379)
...... ...++++++++.++ ..+.++|+.....
T Consensus 121 ---------~~~~~~~~~~~~~~~~~~a~~--~~~~~id~~~~~~ 154 (179)
T PF13472_consen 121 ---------QDYLNRRIDRYNQAIRELAKK--YGVPFIDLFDAFD 154 (179)
T ss_dssp ---------TTCHHHHHHHHHHHHHHHHHH--CTEEEEEHHHHHB
T ss_pred ---------chhhhhhHHHHHHHHHHHHHH--cCCEEEECHHHHc
Confidence 000000 11467788887775 3889999999854
No 31
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=37.54 E-value=19 Score=32.32 Aligned_cols=36 Identities=11% Similarity=0.017 Sum_probs=23.6
Q ss_pred CccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHh
Q 017027 208 GADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDL 261 (379)
Q Consensus 208 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~ 261 (379)
.+|+||+..|.==. .. + . -.+.|...++.+++.+.+
T Consensus 71 ~pd~Vii~~GtND~----------~~-~------~-~~~~~~~~l~~li~~~~~ 106 (191)
T PRK10528 71 QPRWVLVELGGNDG----------LR-G------F-PPQQTEQTLRQIIQDVKA 106 (191)
T ss_pred CCCEEEEEeccCcC----------cc-C------C-CHHHHHHHHHHHHHHHHH
Confidence 57999999886521 10 0 1 145778888888887765
No 32
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=35.47 E-value=1.7e+02 Score=26.98 Aligned_cols=86 Identities=15% Similarity=0.135 Sum_probs=48.4
Q ss_pred hHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCcccccC---CccCcccCCCCc----hHHHHHHHHHHHhc
Q 017027 244 PMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKCYKQ---RTPLAFFSHQHV----PEQLVVLKEVLRRM 316 (379)
Q Consensus 244 ~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~C~~~---t~P~~~~~~~~~----~~~~~~~~~~~~~~ 316 (379)
....|+..++.+++.|.+. .++++|++-++.+--...+.+ |... ..|+........ .+.+++++++.++.
T Consensus 125 ~~~~~~~~l~~~l~~i~~~--~p~a~I~~~gyp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ln~~i~~~a~~~ 201 (259)
T cd01823 125 ALDEVGARLKAVLDRIRER--APNARVVVVGYPRLFPPDGGD-CDKSCSPGTPLTPADRPELNQLVDKLNALIRRAAADA 201 (259)
T ss_pred HHHHHHHHHHHHHHHHHhh--CCCcEEEEecccccccCCCCC-cccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3567888888888887763 467889999976633222222 1101 111111100011 14666777776653
Q ss_pred C-CceEEeecccccccc
Q 017027 317 R-FPVYLQDITTMSALR 332 (379)
Q Consensus 317 ~-~~v~lLDit~ms~~R 332 (379)
+ .++.++|+.+....+
T Consensus 202 ~~~~v~fvD~~~~f~~~ 218 (259)
T cd01823 202 GDYKVRFVDTDAPFAGH 218 (259)
T ss_pred CCceEEEEECCCCcCCC
Confidence 2 349999999876644
No 33
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=35.23 E-value=18 Score=31.23 Aligned_cols=78 Identities=13% Similarity=0.077 Sum_probs=46.1
Q ss_pred CccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecC-CCCCCCCCcc
Q 017027 208 GADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMS-PRHNRENGWK 286 (379)
Q Consensus 208 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~s-P~Hf~~g~W~ 286 (379)
.+|+|||..|.-=. .. + .-.+.|++.++++++.+.+. +++||+-+.. |.++.
T Consensus 64 ~pd~v~i~~G~ND~----------~~-~-------~~~~~~~~~l~~li~~~~~~----~~~vil~~~~~~~~~~----- 116 (177)
T cd01822 64 KPDLVILELGGNDG----------LR-G-------IPPDQTRANLRQMIETAQAR----GAPVLLVGMQAPPNYG----- 116 (177)
T ss_pred CCCEEEEeccCccc----------cc-C-------CCHHHHHHHHHHHHHHHHHC----CCeEEEEecCCCCccc-----
Confidence 57999999996511 00 0 11456888888888877652 4567777653 43321
Q ss_pred cccCCccCcccCCCCchHHHHHHHHHHHhcCCceEEeecc
Q 017027 287 CYKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDIT 326 (379)
Q Consensus 287 C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLDit 326 (379)
. . .....+++++++.++. ++.++|.+
T Consensus 117 ---~--~-------~~~~~~~~~~~~a~~~--~~~~~d~~ 142 (177)
T cd01822 117 ---P--R-------YTRRFAAIYPELAEEY--GVPLVPFF 142 (177)
T ss_pred ---h--H-------HHHHHHHHHHHHHHHc--CCcEechH
Confidence 0 0 0124677777777653 46677763
No 34
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=34.97 E-value=19 Score=31.58 Aligned_cols=12 Identities=33% Similarity=0.617 Sum_probs=10.1
Q ss_pred eEEEEecchhHH
Q 017027 124 RIMLVGDSIMRN 135 (379)
Q Consensus 124 ~i~FVGDSl~Rn 135 (379)
+|+|+|||++..
T Consensus 2 ~i~~~GDSit~G 13 (188)
T cd01827 2 KVACVGNSITEG 13 (188)
T ss_pred eEEEEecccccc
Confidence 699999999654
No 35
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=29.40 E-value=26 Score=31.59 Aligned_cols=56 Identities=9% Similarity=0.018 Sum_probs=34.4
Q ss_pred CccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCC
Q 017027 208 GADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSP 277 (379)
Q Consensus 208 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP 277 (379)
.+|+|||..|.==.... ..... ......+.|+..|+++++.+.+. +.+|++-|..|
T Consensus 74 ~p~~vii~~G~ND~~~~---------~~~~~-~~~~~~~~~~~~l~~ii~~~~~~----~~~vil~t~~P 129 (204)
T cd01830 74 GVRTVIILEGVNDIGAS---------GTDFA-AAPVTAEELIAGYRQLIRRAHAR----GIKVIGATITP 129 (204)
T ss_pred CCCEEEEeccccccccc---------ccccc-cCCCCHHHHHHHHHHHHHHHHHC----CCeEEEecCCC
Confidence 57899998886411000 00000 01123567888999999887652 56799988888
No 36
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=28.53 E-value=27 Score=31.39 Aligned_cols=10 Identities=40% Similarity=0.511 Sum_probs=0.0
Q ss_pred eEEEEecchh
Q 017027 124 RIMLVGDSIM 133 (379)
Q Consensus 124 ~i~FVGDSl~ 133 (379)
+|+|+|||++
T Consensus 1 ~I~~~GDSiT 10 (208)
T cd01839 1 TILCFGDSNT 10 (208)
T ss_pred CEEEEecCcc
No 37
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=26.80 E-value=45 Score=29.32 Aligned_cols=25 Identities=28% Similarity=0.284 Sum_probs=19.3
Q ss_pred cCCeEEEEecchhHHHHHHHHHhhcc
Q 017027 121 RRKRIMLVGDSIMRNQWESLVCLVQG 146 (379)
Q Consensus 121 rgK~i~FVGDSl~Rn~~~SL~clL~~ 146 (379)
.|++|+|||| .--|...||+.++..
T Consensus 1 ~gl~i~~vGD-~~~rv~~Sl~~~~~~ 25 (158)
T PF00185_consen 1 KGLKIAYVGD-GHNRVAHSLIELLAK 25 (158)
T ss_dssp TTEEEEEESS-TTSHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCChHHHHHHHHHHH
Confidence 4889999999 434568899988833
No 38
>COG0621 MiaB 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]
Probab=26.36 E-value=2.5e+02 Score=29.19 Aligned_cols=44 Identities=16% Similarity=0.137 Sum_probs=27.4
Q ss_pred CCccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCC
Q 017027 207 RGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSP 277 (379)
Q Consensus 207 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP 277 (379)
..+||+|||| |.+- ..|=++++.++-++...+ ++.+|++-..-+
T Consensus 39 ~eADvviiNT-------------C~V~-----------~~a~~k~~~~i~~~~~~~---p~~~iiVtGC~a 82 (437)
T COG0621 39 EEADVVIINT-------------CAVR-----------EKAEQKVRSAIGELKKLK---PDAKIIVTGCLA 82 (437)
T ss_pred ccCCEEEEec-------------Ceee-----------ehHHHHHHHHHHHHHHhC---CCCEEEEeCCcc
Confidence 3589999999 4432 224456666666665543 566777765444
No 39
>PF06462 Hyd_WA: Propeller; InterPro: IPR006624 Tectonins I and II are two dominant proteins in the nuclei and nuclear matrix from plasmodia of Physarum polycephalum (Slime mold) which encode 217 and 353 amino acids, respectively. Tectonin I is homologous to the C-terminal two-thirds of tectonin II. Both proteins contain six tandem repeats that are each 33-37 amino acids in length and define a new consensus sequence. Homologous repeats are found in L-6, a bacterial lipopolysaccharide-binding lectin from horseshoe crab hemocytes. The repetitive sequences of the tectonins and L-6 are reminiscent of the WD repeats of the beta-subunit of G proteins, suggesting that they form beta-propeller domains. The tectonins may be lectins that function as part of a transmembrane signalling complex during phagocytosis [].
Probab=25.99 E-value=64 Score=20.59 Aligned_cols=20 Identities=30% Similarity=0.687 Sum_probs=16.4
Q ss_pred CCcEEEEee-cCCCCCCCCCc
Q 017027 266 RRTRVIFRS-MSPRHNRENGW 285 (379)
Q Consensus 266 ~~t~VffRt-~sP~Hf~~g~W 285 (379)
....|++|+ ++|...+|..|
T Consensus 8 ~~G~v~~R~Gis~~~P~G~~W 28 (32)
T PF06462_consen 8 SDGSVYFRTGISPSNPEGTSW 28 (32)
T ss_pred CCCCEEEECcCCCCCCCCCCc
Confidence 356799999 88888888888
No 40
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=20.33 E-value=75 Score=27.09 Aligned_cols=72 Identities=11% Similarity=0.056 Sum_probs=43.6
Q ss_pred CccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCccc
Q 017027 208 GADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKC 287 (379)
Q Consensus 208 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~C 287 (379)
..|+|||..|.==. .++..|+++++.+ +++.+|++-+..+ ...|
T Consensus 50 ~~d~vvi~lGtNd~-------------------------~~~~nl~~ii~~~-----~~~~~ivlv~~~~----~~~~-- 93 (150)
T cd01840 50 LRKTVVIGLGTNGP-------------------------FTKDQLDELLDAL-----GPDRQVYLVNPHV----PRPW-- 93 (150)
T ss_pred CCCeEEEEecCCCC-------------------------CCHHHHHHHHHHc-----CCCCEEEEEECCC----Ccch--
Confidence 47999998875311 1356666666643 2346788866532 1112
Q ss_pred ccCCccCcccCCCCchHHHHHHHHHHHhcCCceEEeecccccc
Q 017027 288 YKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMSA 330 (379)
Q Consensus 288 ~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLDit~ms~ 330 (379)
..+.+++++++.++. .++.++|......
T Consensus 94 --------------~~~~n~~~~~~a~~~-~~v~~id~~~~~~ 121 (150)
T cd01840 94 --------------EPDVNAYLLDAAKKY-KNVTIIDWYKAAK 121 (150)
T ss_pred --------------HHHHHHHHHHHHHHC-CCcEEecHHHHhc
Confidence 125677777777652 3799999887654
No 41
>PF00919 UPF0004: Uncharacterized protein family UPF0004; InterPro: IPR013848 The methylthiotransferase (MTTase) or miaB-like family is named after the (dimethylallyl)adenosine tRNA MTTase miaB protein, which catalyses a C-H to C-S bond conversion in the methylthiolation of tRNA. A related bacterial enzyme rimO performs a similar methylthiolation, but on a protein substrate. RimO acts on the ribosomal protein S12 and forms a separate MTTase subfamily. The miaB-subfamily includes mammalian CDK5 regulatory subunit-associated proteins and similar proteins in other eukaryotes. Two other subfamilies, yqeV and CDKAL1, are named after a Bacillus subtilis and a human protein, respectively. While yqeV-like proteins are found in bacteria, CDKAL1 subfamily members occur in eukaryotes and in archaebacteria. The likely MTTases from these 4 subfamilies contain an N-terminal MTTase domain, a central radical generating fold and a C-terminal TRAM domain (see PDOC50926 from PROSITEDOC). The core forms a radical SAM fold (or AdoMet radical), containing a cysteine motif CxxxCxxC that binds a [4Fe-4S] cluster [, , ]. A reducing equivalent from the [4Fe-4S]+ cluster is used to cleave S-adenosylmethionine (SAM) to generate methionine and a 5'-deoxyadenosyl radical. The latter is thought to produce a reactive substrate radical that is amenable to sulphur insertion [, ]. The N-terminal MTTase domain contains 3 cysteines that bind a second [4Fe-4S] cluster, in addition to the radical-generating [4Fe-4S] cluster, which could be involved in the thiolation reaction. The C-terminal TRAM domain is not shared with other radical SAM proteins outside the MTTase family. The TRAM domain can bind to RNA substrate and seems to be important for substrate recognition. The tertiary structure of the central radical SAM fold has six beta/alpha motifs resembling a three-quarter TIM barrel core (see PDOC00155 from PROSITEDOC) []. The N-terminal MTTase domain might form an additional [beta/alpha]2 TIM barrel unit []. ; GO: 0003824 catalytic activity, 0051539 4 iron, 4 sulfur cluster binding, 0009451 RNA modification
Probab=20.11 E-value=2.6e+02 Score=22.57 Aligned_cols=45 Identities=16% Similarity=0.161 Sum_probs=28.3
Q ss_pred CCccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCC
Q 017027 207 RGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSP 277 (379)
Q Consensus 207 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP 277 (379)
..+|++|||| |.+ +..|=+++++++.++...+ .++.+|++-.--|
T Consensus 35 e~AD~iiiNT-------------C~V-----------~~~Ae~k~~~~i~~l~~~~--~~~~~ivv~GC~a 79 (98)
T PF00919_consen 35 EEADVIIINT-------------CTV-----------RESAEQKSRNRIRKLKKLK--KPGAKIVVTGCMA 79 (98)
T ss_pred ccCCEEEEEc-------------CCC-----------CcHHHHHHHHHHHHHHHhc--CCCCEEEEEeCcc
Confidence 4689999999 433 1235567777777766553 2556677655443
Done!