Query 017030
Match_columns 378
No_of_seqs 203 out of 2535
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 07:47:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017030.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017030hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yp2_A Glucose-1-phosphate ade 100.0 4.2E-53 1.4E-57 411.4 32.8 363 6-375 18-403 (451)
2 3brk_X Glucose-1-phosphate ade 100.0 3.5E-51 1.2E-55 394.1 33.7 350 6-376 10-379 (420)
3 3st8_A Bifunctional protein GL 100.0 9.9E-41 3.4E-45 327.9 27.3 236 7-284 11-255 (501)
4 1hm9_A GLMU, UDP-N-acetylgluco 100.0 2.5E-40 8.5E-45 323.1 27.2 318 8-374 11-363 (468)
5 2ggo_A 401AA long hypothetical 100.0 2E-39 6.7E-44 310.6 24.1 301 9-370 1-330 (401)
6 4fce_A Bifunctional protein GL 100.0 1.4E-38 4.8E-43 309.9 23.8 316 7-374 7-358 (459)
7 2v0h_A Bifunctional protein GL 100.0 4.5E-38 1.6E-42 306.1 24.4 311 7-369 4-332 (456)
8 3juk_A UDP-glucose pyrophospho 100.0 4.5E-38 1.5E-42 286.7 20.4 243 8-289 2-271 (281)
9 4ecm_A Glucose-1-phosphate thy 100.0 1.5E-35 5.2E-40 268.1 23.6 236 7-290 23-261 (269)
10 2e3d_A UTP--glucose-1-phosphat 100.0 2E-34 6.8E-39 265.3 22.1 245 6-290 6-283 (302)
11 1tzf_A Glucose-1-phosphate cyt 100.0 3E-34 1E-38 258.4 20.5 246 8-290 2-252 (259)
12 2ux8_A Glucose-1-phosphate uri 100.0 2E-34 7E-39 264.5 18.5 248 6-291 12-282 (297)
13 2pa4_A UTP-glucose-1-phosphate 100.0 3E-33 1E-37 259.5 21.8 249 7-291 11-285 (323)
14 4evw_A Nucleoside-diphosphate- 100.0 1.1E-33 3.8E-38 253.4 17.6 228 11-286 2-245 (255)
15 1fxo_A Glucose-1-phosphate thy 100.0 8.8E-33 3E-37 252.4 23.5 233 8-287 2-240 (293)
16 1lvw_A Glucose-1-phosphate thy 100.0 1.8E-32 6E-37 250.4 23.5 233 8-287 3-241 (295)
17 3pnn_A Conserved domain protei 100.0 7.8E-34 2.7E-38 260.9 14.5 258 6-288 3-291 (303)
18 1mc3_A Glucose-1-phosphate thy 100.0 1E-32 3.4E-37 252.1 19.6 233 8-287 3-241 (296)
19 2qh5_A PMI, ALGA, mannose-6-ph 100.0 8.4E-32 2.9E-36 248.1 15.9 242 7-287 3-283 (308)
20 2x65_A Mannose-1-phosphate gua 100.0 2.6E-30 9E-35 240.1 14.0 233 9-282 2-270 (336)
21 1jyk_A LICC protein, CTP:phosp 100.0 1.2E-29 4.3E-34 227.2 14.4 221 7-288 24-252 (254)
22 2cu2_A Putative mannose-1-phos 100.0 1.5E-29 5.2E-34 235.1 11.6 234 8-285 2-268 (337)
23 3oam_A 3-deoxy-manno-octuloson 100.0 3.9E-28 1.3E-32 217.1 16.7 237 8-289 2-250 (252)
24 3tqd_A 3-deoxy-manno-octuloson 99.9 2.2E-25 7.4E-30 198.8 19.4 238 7-285 8-255 (256)
25 3k8d_A 3-deoxy-manno-octuloson 99.9 2.1E-25 7.2E-30 199.8 16.3 239 6-286 16-263 (264)
26 2y6p_A 3-deoxy-manno-octuloson 99.9 2.7E-24 9.1E-29 190.3 17.4 223 8-286 2-231 (234)
27 2xme_A CTP-inositol-1-phosphat 99.9 2.2E-24 7.5E-29 190.6 12.0 214 6-285 16-231 (232)
28 4fcu_A 3-deoxy-manno-octuloson 99.9 3.9E-23 1.3E-27 184.0 18.2 237 9-289 2-251 (253)
29 1h7e_A 3-deoxy-manno-octuloson 99.9 7E-23 2.4E-27 182.4 19.5 227 8-287 2-238 (245)
30 1vic_A 3-deoxy-manno-octuloson 99.9 3.7E-22 1.3E-26 179.5 20.0 243 8-289 2-254 (262)
31 2icy_A Probable UTP-glucose-1- 99.9 1.4E-20 4.7E-25 180.0 21.7 321 7-362 78-468 (469)
32 2vsh_A TARI, 2-C-methyl-D-eryt 99.9 3.9E-21 1.3E-25 170.0 13.0 223 9-287 3-234 (236)
33 2xwl_A 2-C-methyl-D-erythritol 99.9 8.7E-21 3E-25 166.3 15.0 214 8-288 2-220 (223)
34 3f1c_A Putative 2-C-methyl-D-e 99.8 4.2E-21 1.4E-25 170.9 12.6 230 6-290 1-236 (246)
35 1vgw_A 4-diphosphocytidyl-2C-m 99.8 4.7E-20 1.6E-24 162.6 17.2 220 7-286 5-228 (231)
36 1ezi_A CMP-N-acetylneuraminic 99.8 1.9E-20 6.4E-25 164.8 14.4 217 7-287 3-224 (228)
37 2yc3_A 2-C-methyl-D-erythritol 99.8 1.6E-20 5.3E-25 165.3 12.4 219 7-287 3-225 (228)
38 2i5k_A UTP--glucose-1-phosphat 99.8 1.6E-19 5.5E-24 173.7 19.7 325 6-365 90-487 (488)
39 2dpw_A Hypothetical protein TT 99.8 2.7E-21 9.2E-26 170.7 3.2 200 8-280 2-231 (232)
40 1i52_A 4-diphosphocytidyl-2-C- 99.8 5E-19 1.7E-23 156.5 14.7 221 5-289 4-230 (236)
41 1qwj_A Cytidine monophospho-N- 99.8 3.8E-19 1.3E-23 156.5 13.8 217 7-288 2-222 (229)
42 2waw_A MOBA relate protein; un 99.8 5.8E-18 2E-22 145.4 14.0 187 7-286 4-195 (199)
43 3rsb_A Adenosylcobinamide-phos 99.8 1.6E-18 5.5E-23 148.7 10.3 130 9-167 1-137 (196)
44 2wee_A MOBA-related protein; u 99.8 3.5E-18 1.2E-22 146.7 12.2 121 7-159 4-126 (197)
45 2px7_A 2-C-methyl-D-erythritol 99.7 7.7E-18 2.6E-22 148.8 11.5 205 8-288 25-233 (236)
46 3q80_A 2-C-methyl-D-erythritol 99.7 7.8E-17 2.7E-21 141.3 17.5 218 7-286 6-229 (231)
47 1vpa_A 2-C-methyl-D-erythritol 99.7 4.5E-17 1.5E-21 143.7 15.9 214 7-288 12-229 (234)
48 2oeg_A UTP-glucose-1-phosphate 99.7 2E-15 6.7E-20 145.0 19.3 332 7-361 74-490 (505)
49 2e8b_A Probable molybdopterin- 99.7 3.3E-17 1.1E-21 141.1 5.6 179 7-286 13-198 (201)
50 1jv1_A Glcnac1P uridyltransfer 99.7 3.8E-16 1.3E-20 150.8 13.3 210 6-239 100-344 (505)
51 1e5k_A Molybdopterin-guanine d 99.6 7.3E-16 2.5E-20 132.6 9.4 111 6-151 4-116 (201)
52 3d5n_A Q97W15_sulso; NESG, SSR 99.6 3.7E-16 1.2E-20 134.1 7.4 115 8-159 2-118 (197)
53 3ngw_A Molybdopterin-guanine d 99.5 3.7E-14 1.3E-18 122.3 12.7 115 9-161 1-117 (208)
54 1w55_A ISPD/ISPF bifunctional 99.5 4.6E-15 1.6E-19 138.5 6.5 197 7-283 2-202 (371)
55 2yqc_A UDP-N-acetylglucosamine 99.5 7.2E-14 2.5E-18 134.5 11.7 214 7-239 102-352 (486)
56 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.5 6.1E-15 2.1E-19 138.9 3.0 103 130-272 11-117 (374)
57 3oc9_A UDP-N-acetylglucosamine 99.5 1.5E-13 5E-18 128.0 12.0 211 6-237 33-275 (405)
58 3r8y_A 2,3,4,5-tetrahydropyrid 99.3 5.9E-13 2E-17 117.6 2.7 115 257-374 37-186 (240)
59 3c8v_A Putative acetyltransfer 99.3 4.4E-13 1.5E-17 128.9 -0.6 215 107-372 123-360 (496)
60 3brk_X Glucose-1-phosphate ade 99.0 9E-10 3.1E-14 105.3 8.8 69 304-372 323-392 (420)
61 3r3i_A UTP--glucose-1-phosphat 98.9 4.1E-08 1.4E-12 93.8 15.2 338 6-363 125-525 (528)
62 1xhd_A Putative acetyltransfer 98.9 4.8E-09 1.6E-13 87.5 7.6 77 295-371 20-107 (173)
63 3ixc_A Hexapeptide transferase 98.8 8.1E-09 2.8E-13 87.6 7.1 77 295-371 41-129 (191)
64 1v3w_A Ferripyochelin binding 98.8 1.1E-08 3.7E-13 85.4 7.1 76 295-370 18-104 (173)
65 3r3r_A Ferripyochelin binding 98.7 1.4E-08 4.8E-13 85.8 6.9 76 295-370 23-116 (187)
66 3bfp_A Acetyltransferase; LEFT 98.7 3.7E-08 1.3E-12 83.7 9.5 101 269-369 50-158 (194)
67 3kwd_A Carbon dioxide concentr 98.7 5.3E-08 1.8E-12 84.0 9.7 50 322-371 112-163 (213)
68 3gue_A UTP-glucose-1-phosphate 98.7 1.2E-06 4.1E-11 83.1 19.4 334 7-358 75-482 (484)
69 2pig_A Putative transferase; S 98.7 2.7E-08 9.1E-13 91.3 7.4 44 300-343 78-123 (334)
70 4e79_A UDP-3-O-acylglucosamine 98.7 5.4E-08 1.9E-12 90.6 9.7 46 269-314 78-123 (357)
71 3r1w_A Carbonic anhydrase; bet 98.7 2.9E-08 1E-12 83.9 6.9 76 295-370 27-120 (189)
72 3eh0_A UDP-3-O-[3-hydroxymyris 98.6 9.7E-08 3.3E-12 88.4 9.9 99 271-369 74-178 (341)
73 3r8y_A 2,3,4,5-tetrahydropyrid 98.6 3.4E-08 1.2E-12 86.9 6.5 74 300-373 116-202 (240)
74 2v0h_A Bifunctional protein GL 98.6 5E-08 1.7E-12 94.1 8.2 80 295-374 273-355 (456)
75 2pig_A Putative transferase; S 98.6 5.1E-08 1.7E-12 89.4 7.2 69 305-373 65-136 (334)
76 3vbi_A ANTD, galactoside O-ace 98.6 2.5E-08 8.6E-13 85.5 4.9 57 296-352 41-106 (205)
77 1j2z_A Acyl-[acyl-carrier-prot 98.6 6.3E-08 2.2E-12 86.6 7.5 54 299-352 7-64 (270)
78 3pmo_A UDP-3-O-[3-hydroxymyris 98.6 1.1E-07 3.7E-12 89.0 9.3 96 270-369 95-194 (372)
79 3kwd_A Carbon dioxide concentr 98.6 1.3E-07 4.5E-12 81.5 9.2 76 297-372 49-147 (213)
80 1qre_A Carbonic anhydrase; bet 98.6 1.2E-07 4.2E-12 83.6 9.2 48 322-369 141-190 (247)
81 2ggo_A 401AA long hypothetical 98.6 6.2E-08 2.1E-12 91.9 6.9 74 298-371 273-367 (401)
82 4ea9_A Perosamine N-acetyltran 98.6 1.4E-07 4.9E-12 81.7 8.5 98 272-369 77-180 (220)
83 1xhd_A Putative acetyltransfer 98.5 1.9E-07 6.6E-12 77.7 8.4 65 306-370 52-124 (173)
84 3ixc_A Hexapeptide transferase 98.5 1.7E-07 6E-12 79.3 8.0 64 307-370 74-146 (191)
85 3r3r_A Ferripyochelin binding 98.5 1.3E-07 4.3E-12 79.8 6.5 76 295-370 41-134 (187)
86 3t57_A UDP-N-acetylglucosamine 98.5 1.5E-07 5E-12 85.8 7.3 75 295-369 9-92 (305)
87 3r0s_A Acyl-[acyl-carrier-prot 98.5 2E-07 7E-12 83.2 8.1 49 321-369 52-123 (266)
88 4eqy_A Acyl-[acyl-carrier-prot 98.5 2.3E-07 7.9E-12 83.6 8.2 17 337-353 100-116 (283)
89 1qre_A Carbonic anhydrase; bet 98.5 3.8E-07 1.3E-11 80.5 9.3 78 295-372 67-176 (247)
90 3c8v_A Putative acetyltransfer 98.5 1.8E-07 6.1E-12 90.0 7.6 72 305-376 273-347 (496)
91 3vbi_A ANTD, galactoside O-ace 98.5 2.3E-07 7.8E-12 79.5 7.1 78 295-372 60-170 (205)
92 1v3w_A Ferripyochelin binding 98.5 3.4E-07 1.2E-11 76.2 7.8 65 306-370 50-122 (173)
93 2qia_A UDP-N-acetylglucosamine 98.5 3.2E-07 1.1E-11 81.7 7.7 49 321-369 53-123 (262)
94 4fce_A Bifunctional protein GL 98.4 2.8E-07 9.7E-12 88.9 7.9 67 304-370 267-336 (459)
95 3jqy_B NEUO, polysialic acid O 98.4 3E-07 1E-11 81.4 7.2 68 305-372 105-199 (252)
96 3mqg_A Lipopolysaccharides bio 98.4 2.8E-07 9.7E-12 78.0 6.7 15 355-369 103-117 (192)
97 3mc4_A WW/RSP5/WWP domain:bact 98.4 3.3E-07 1.1E-11 81.7 7.3 75 299-373 164-253 (287)
98 3hjj_A Maltose O-acetyltransfe 98.4 3.5E-07 1.2E-11 77.3 6.8 70 304-373 77-171 (190)
99 3fs8_A QDTC; acetyltransferase 98.4 4.2E-07 1.4E-11 81.4 7.7 48 322-369 71-121 (273)
100 1yp2_A Glucose-1-phosphate ade 98.4 2.8E-07 9.7E-12 88.8 7.0 69 304-372 329-417 (451)
101 3r1w_A Carbonic anhydrase; bet 98.4 4.3E-07 1.5E-11 76.7 6.8 76 295-370 45-138 (189)
102 4e6u_A Acyl-[acyl-carrier-prot 98.4 6.4E-07 2.2E-11 79.9 8.2 49 321-369 55-125 (265)
103 1hm9_A GLMU, UDP-N-acetylgluco 98.4 5.1E-07 1.7E-11 87.3 7.5 70 305-374 309-380 (468)
104 2p2o_A Maltose transacetylase; 98.4 8.3E-07 2.8E-11 74.6 7.7 69 304-372 73-166 (185)
105 3srt_A Maltose O-acetyltransfe 98.4 8.2E-07 2.8E-11 74.9 7.6 68 305-372 76-168 (188)
106 1ssq_A SAT, serine acetyltrans 98.4 6.6E-07 2.3E-11 79.2 7.0 103 267-373 102-226 (267)
107 3hsq_A Acyl-[acyl-carrier-prot 98.3 9.2E-07 3.1E-11 78.6 7.8 53 316-368 42-117 (259)
108 3tv0_A Dynactin subunit 6; LEF 98.3 8E-07 2.7E-11 75.4 7.0 59 296-354 21-102 (194)
109 3bfp_A Acetyltransferase; LEFT 98.3 8.4E-07 2.9E-11 75.2 7.1 78 295-372 97-179 (194)
110 3nz2_A Hexapeptide-repeat cont 98.3 8.1E-07 2.8E-11 75.4 6.9 69 304-372 75-168 (195)
111 3r0s_A Acyl-[acyl-carrier-prot 98.3 8.1E-07 2.8E-11 79.2 7.2 51 321-371 34-100 (266)
112 3ftt_A Putative acetyltransfer 98.3 1.1E-06 3.7E-11 74.8 7.5 68 304-371 73-165 (199)
113 1j2z_A Acyl-[acyl-carrier-prot 98.3 9.3E-07 3.2E-11 79.0 7.4 56 298-353 24-95 (270)
114 3f1x_A Serine acetyltransferas 98.3 8.5E-07 2.9E-11 80.1 7.0 74 300-373 191-288 (310)
115 1t3d_A SAT, serine acetyltrans 98.3 9.3E-07 3.2E-11 78.9 7.1 103 267-373 122-246 (289)
116 3eh0_A UDP-3-O-[3-hydroxymyris 98.3 7.1E-07 2.4E-11 82.6 6.4 66 304-369 144-237 (341)
117 3jqy_B NEUO, polysialic acid O 98.3 8.5E-07 2.9E-11 78.4 6.6 65 306-370 86-179 (252)
118 2rij_A Putative 2,3,4,5-tetrah 98.3 1.4E-06 4.9E-11 80.4 8.2 112 261-373 163-325 (387)
119 3fs8_A QDTC; acetyltransferase 98.3 1E-06 3.4E-11 79.0 7.0 49 321-369 88-139 (273)
120 3mqg_A Lipopolysaccharides bio 98.3 5.8E-07 2E-11 76.0 5.1 73 295-367 5-82 (192)
121 4eqy_A Acyl-[acyl-carrier-prot 98.3 1.1E-06 3.7E-11 79.2 7.0 56 297-352 26-85 (283)
122 1ocx_A Maltose O-acetyltransfe 98.3 1.8E-06 6.3E-11 72.2 7.9 68 304-371 71-163 (182)
123 4e79_A UDP-3-O-acylglucosamine 98.3 9.3E-07 3.2E-11 82.2 6.5 32 321-352 150-183 (357)
124 3pmo_A UDP-3-O-[3-hydroxymyris 98.3 8.3E-07 2.9E-11 83.0 5.9 33 337-369 222-259 (372)
125 2qia_A UDP-N-acetylglucosamine 98.3 1.7E-06 5.9E-11 76.9 7.6 74 298-371 10-100 (262)
126 3gos_A 2,3,4,5-tetrahydropyrid 98.3 1.3E-06 4.6E-11 78.1 6.8 67 305-371 133-212 (276)
127 3eg4_A 2,3,4,5-tetrahydropyrid 98.2 1.1E-06 3.9E-11 79.5 6.3 49 322-370 177-236 (304)
128 3hsq_A Acyl-[acyl-carrier-prot 98.2 1.6E-06 5.5E-11 77.0 7.0 32 321-352 79-118 (259)
129 4e6u_A Acyl-[acyl-carrier-prot 98.2 1.8E-06 6.3E-11 76.9 7.2 32 321-352 85-125 (265)
130 4ea9_A Perosamine N-acetyltran 98.2 1.7E-06 5.8E-11 74.9 6.7 76 296-371 120-200 (220)
131 1krr_A Galactoside O-acetyltra 98.2 4.9E-06 1.7E-10 70.7 8.8 66 304-369 74-164 (203)
132 2wlg_A Polysialic acid O-acety 98.2 2.6E-06 9E-11 73.4 7.0 17 321-337 100-117 (215)
133 3tk8_A 2,3,4,5-tetrahydropyrid 98.2 1.7E-06 5.7E-11 78.7 5.8 51 321-371 192-253 (316)
134 3fsy_A Tetrahydrodipicolinate 98.2 2E-06 6.9E-11 76.7 5.9 52 322-374 208-269 (332)
135 3gos_A 2,3,4,5-tetrahydropyrid 98.2 2.1E-06 7.1E-11 76.9 6.1 11 321-331 177-187 (276)
136 3t57_A UDP-N-acetylglucosamine 98.1 3.6E-06 1.2E-10 76.6 7.5 55 316-370 49-124 (305)
137 2iu8_A LPXD, UDP-3-O-[3-hydrox 98.1 1.9E-06 6.3E-11 80.9 5.6 74 297-370 128-206 (374)
138 3eg4_A 2,3,4,5-tetrahydropyrid 98.1 1.6E-06 5.4E-11 78.6 4.7 10 322-331 203-212 (304)
139 3tk8_A 2,3,4,5-tetrahydropyrid 98.1 7E-07 2.4E-11 81.2 2.1 49 321-369 174-233 (316)
140 3tv0_A Dynactin subunit 6; LEF 98.1 5.1E-06 1.8E-10 70.3 7.2 67 305-371 12-102 (194)
141 3q1x_A Serine acetyltransferas 98.1 3.8E-06 1.3E-10 76.0 6.6 74 300-373 164-260 (313)
142 3r5d_A Tetrahydrodipicolinate 98.1 2.9E-06 9.9E-11 76.2 5.4 54 321-375 230-293 (347)
143 3st8_A Bifunctional protein GL 98.0 9.2E-06 3.1E-10 79.2 8.1 73 300-372 347-429 (501)
144 3mc4_A WW/RSP5/WWP domain:bact 98.0 6.3E-06 2.2E-10 73.4 5.7 34 322-355 217-252 (287)
145 3r5d_A Tetrahydrodipicolinate 98.0 3E-06 1E-10 76.1 3.6 71 298-369 189-271 (347)
146 3srt_A Maltose O-acetyltransfe 98.0 9.3E-06 3.2E-10 68.3 6.5 64 305-370 62-148 (188)
147 4hur_A Virginiamycin A acetylt 98.0 1.2E-05 4.3E-10 69.4 6.8 37 337-373 119-156 (220)
148 2wlg_A Polysialic acid O-acety 97.9 1.2E-05 4E-10 69.2 6.4 65 306-370 59-153 (215)
149 3f1x_A Serine acetyltransferas 97.9 8E-06 2.7E-10 73.7 5.4 32 323-354 253-286 (310)
150 3ftt_A Putative acetyltransfer 97.9 1.1E-05 3.9E-10 68.4 5.8 32 321-352 74-109 (199)
151 3nz2_A Hexapeptide-repeat cont 97.9 1.6E-05 5.5E-10 67.3 6.3 34 321-354 76-113 (195)
152 1ssq_A SAT, serine acetyltrans 97.9 1.3E-05 4.5E-10 70.8 5.5 55 301-355 159-225 (267)
153 1t3d_A SAT, serine acetyltrans 97.9 1.6E-05 5.5E-10 70.9 5.9 54 302-355 180-245 (289)
154 3hjj_A Maltose O-acetyltransfe 97.8 2.6E-05 8.9E-10 65.7 6.5 32 321-352 78-113 (190)
155 3fsy_A Tetrahydrodipicolinate 97.8 2.1E-05 7.1E-10 70.2 5.7 71 299-369 161-248 (332)
156 3eev_A Chloramphenicol acetylt 97.8 3.9E-05 1.3E-09 65.8 7.1 34 338-371 112-146 (212)
157 2rij_A Putative 2,3,4,5-tetrah 97.7 2.8E-05 9.7E-10 71.8 5.3 13 225-237 82-94 (387)
158 1krr_A Galactoside O-acetyltra 97.7 4.5E-05 1.5E-09 64.8 5.9 33 321-353 75-111 (203)
159 3ogz_A UDP-sugar pyrophosphory 97.7 0.00022 7.6E-09 69.5 10.8 172 7-185 113-320 (630)
160 2p2o_A Maltose transacetylase; 97.6 9E-05 3.1E-09 62.0 6.2 45 321-366 130-176 (185)
161 3q1x_A Serine acetyltransferas 97.5 4.6E-05 1.6E-09 68.9 3.9 9 306-314 164-172 (313)
162 1ocx_A Maltose O-acetyltransfe 97.4 0.00013 4.6E-09 60.8 5.0 15 338-352 93-107 (182)
163 4e8l_A Virginiamycin A acetylt 97.4 0.00027 9.1E-09 60.7 6.7 34 338-371 119-153 (219)
164 1mr7_A Streptogramin A acetylt 97.3 0.00025 8.5E-09 60.5 5.3 33 338-370 114-147 (209)
165 1xat_A Xenobiotic acetyltransf 97.2 0.00045 1.6E-08 58.9 6.3 15 321-335 56-71 (212)
166 3eev_A Chloramphenicol acetylt 97.1 0.00056 1.9E-08 58.5 5.9 33 321-353 111-145 (212)
167 4hur_A Virginiamycin A acetylt 97.1 0.00055 1.9E-08 58.9 5.9 32 322-353 120-153 (220)
168 2i5e_A Hypothetical protein MM 97.0 0.00025 8.4E-09 60.6 1.9 101 7-150 2-111 (211)
169 1mr7_A Streptogramin A acetylt 96.3 0.003 1E-07 53.8 3.9 33 342-374 112-146 (209)
170 4e8l_A Virginiamycin A acetylt 96.2 0.0073 2.5E-07 51.7 5.9 35 321-355 118-154 (219)
171 1xat_A Xenobiotic acetyltransf 94.5 0.041 1.4E-06 46.7 4.9 35 321-355 110-146 (212)
172 3bcv_A Putative glycosyltransf 78.7 6.5 0.00022 32.9 7.8 48 108-161 70-118 (240)
173 1qg8_A Protein (spore coat pol 78.7 21 0.00072 29.9 11.2 107 34-155 7-116 (255)
174 3cgx_A Putative nucleotide-dip 73.3 4.3 0.00015 34.8 5.1 85 41-152 38-128 (242)
175 1xhb_A Polypeptide N-acetylgal 61.4 54 0.0019 30.6 10.7 105 34-159 35-146 (472)
176 2ffu_A Ppgalnact-2, polypeptid 59.0 32 0.0011 32.6 8.6 99 34-158 72-177 (501)
177 2z86_A Chondroitin synthase; G 51.7 75 0.0026 30.9 10.1 104 33-158 98-205 (625)
178 2d7i_A Polypeptide N-acetylgal 49.9 80 0.0027 30.5 9.9 102 34-157 118-226 (570)
179 2z86_A Chondroitin synthase; G 40.2 1.1E+02 0.0038 29.7 9.3 99 34-155 381-482 (625)
180 3ckj_A Putative uncharacterize 32.5 1.6E+02 0.0054 25.9 8.3 49 108-162 117-168 (329)
181 2xvy_A Chelatase, putative; me 31.8 32 0.0011 29.6 3.4 24 38-62 63-86 (269)
182 1ee6_A Pectate lyase; parallel 25.6 66 0.0023 26.2 3.8 60 309-370 40-110 (197)
183 1tjn_A Sirohydrochlorin cobalt 24.8 41 0.0014 26.3 2.5 12 10-22 25-36 (156)
184 4fix_A UDP-galactofuranosyl tr 23.5 1.9E+02 0.0064 28.6 7.5 49 108-158 250-299 (657)
185 3f1y_A Mannosyl-3-phosphoglyce 21.1 75 0.0026 29.0 3.9 51 108-164 165-218 (387)
186 4hg6_A Cellulose synthase subu 20.2 2.2E+02 0.0076 28.8 7.5 42 108-155 224-266 (802)
No 1
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=4.2e-53 Score=411.37 Aligned_cols=363 Identities=57% Similarity=0.987 Sum_probs=281.8
Q ss_pred ccceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCc-c
Q 017030 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGV-T 84 (378)
Q Consensus 6 ~~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~-~ 84 (378)
|++|+|||||||.|+||+|||.++||+|+|++|+||||+|++++|.++|+++|+|++++..+++.+++.+.+ +.+. +
T Consensus 18 ~~~~~avILAaG~gtRl~plT~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~--~~~~~~ 95 (451)
T 1yp2_A 18 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY--ASNMGG 95 (451)
T ss_dssp HHHEEEEEC------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHHHHHHHC--C-----
T ss_pred ccceEEEEECCCCCCcccchhcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCHHHHHHHHhhhh--hccccc
Confidence 557999999999999999999999999999999878999999999999999999999998888999987543 1110 0
Q ss_pred c-CCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEecCHHHHHHHHHHcCCcEEEEE
Q 017030 85 F-GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISC 163 (378)
Q Consensus 85 ~-~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~d~~~~l~~h~~~~~~~ti~~ 163 (378)
+ ....++++...+.. .+.+++.||+++|+.++.++... ..++|++++||++++.++.+++++|+++++++|+++
T Consensus 96 ~~~~~~v~i~~~~~~~--~~~~~~~Gt~~al~~a~~~~~~~---~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~ 170 (451)
T 1yp2_A 96 YKNEGFVEVLAAQQSP--ENPDWFQGTADAVRQYLWLFEEH---TVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAA 170 (451)
T ss_dssp ---CCEEEEEESCSST--TSCCCCCSHHHHHHHTHHHHTTS---CCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEEE
T ss_pred ccccCcEEEecccccc--cccccccCcHHHHHHHHHHHHhc---CCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEEEE
Confidence 1 11124455433321 12234579999999999988531 148999999999998899999999999999999998
Q ss_pred eecCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCC
Q 017030 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (378)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~ 243 (378)
.+.+...+..||++..|++++|.+|.|||.......+.++.++++..+......++++++|+|+|++++|.+++++..+.
T Consensus 171 ~~~~~~~~~~~g~v~~d~~~~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~ 250 (451)
T 1yp2_A 171 LPMDEKRATAFGLMKIDEEGRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFPG 250 (451)
T ss_dssp EEECHHHHTTSEEEEECTTSBEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTTCTT
T ss_pred EEcChhhcccCCEEEECCCCCEEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHHHHhhccc
Confidence 88753336789999999889999999999865433444444444332221112357899999999999987777765444
Q ss_pred CCchhcccccccccc-cceEEEEecceEEecCCHHHHHHHHHhcccCC-CCccccCCCCcEEccCCCCCCceeeCceeee
Q 017030 244 ANDFGSEIIPASANE-QFLKAYLFNDYWEDIGTIRSFFEANLALTAHP-PMFSFYDATKPIYTSRRNLPPSKIDDSKIVD 321 (378)
Q Consensus 244 ~~~~~~~~l~~l~~~-~~i~~~~~~~~~~~i~t~~~~~~a~~~~l~~~-~~~~~~~~~~~i~~~~~i~~~~~i~~~~i~~ 321 (378)
..++.+++++.++++ .+++++.++++|.|++|+++|.+|+++++++. +...++++++.+++++.+++++.|.++.|.+
T Consensus 251 ~~~~~~~~l~~~i~~g~~v~~~~~~~~w~digt~~~l~~a~~~l~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~I~~ 330 (451)
T 1yp2_A 251 ANDFGSEVIPGATSLGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYLPPSKMLDADVTD 330 (451)
T ss_dssp CCCTTTTHHHHHHHTTCCEEEEECCSCCEECSSHHHHHHHHHGGGCSSSCSSCSCCSSSCCCCCCCCCCCEEEEEEEEEE
T ss_pred ccchHhhHHHHHHhcCCceEEEEeCCEEEECCCHHHHHHHHHHHhcccccchhccCCCCeeccCCccCCCeEEcceEEeC
Confidence 456667889888876 78999999999999999999999999999876 6677888899999999999999887788888
Q ss_pred eEEecCcEEcceEEeeceEcCCCEECCCCEEeeeeeCCC-------------------CeEeeeeeeeeeeEe
Q 017030 322 SIISHGSFITSSFIEHSVVGIRSRINANVHLKVSPANPL-------------------CRRIWKCSSLCSVIC 375 (378)
Q Consensus 322 s~Ig~~~~I~~~~i~~SiI~~~~~Ig~~~~i~~sIi~~~-------------------~~~~~~~~~~~~~~~ 375 (378)
++||+||.|+++.|.+|+||++|+||+||.|.++++..+ ++|+++|.+..++|.
T Consensus 331 ~~Ig~~~~I~~~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig 403 (451)
T 1yp2_A 331 SVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIID 403 (451)
T ss_dssp EEECTTCEEEEEEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEEC
T ss_pred eEECCCCEEcceEEeccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeC
Confidence 888888888877788888888888888888888888777 788888777766664
No 2
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.5e-51 Score=394.10 Aligned_cols=350 Identities=36% Similarity=0.574 Sum_probs=268.4
Q ss_pred ccceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCccc
Q 017030 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (378)
Q Consensus 6 ~~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (378)
|++|+|||||||.|+||+|+|..+||+|+|++|+||||+|++++|.++|+++|+|++++..+++.+++.+.|.+.. .+
T Consensus 10 m~~~~avILAaG~gtRl~plT~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~~~~--~~ 87 (420)
T 3brk_X 10 ARDAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRGWDFFR--PE 87 (420)
T ss_dssp GGGEEEEEEECCCCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHSCCCC--GG
T ss_pred hhceEEEEEcCCCCCccchhhcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCChHHHHHHHhhhhcccc--cc
Confidence 3468999999999999999999999999999998679999999999999999999999988889998875432110 00
Q ss_pred CCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEecCHHHHHHHHHHcCCcEEEEEee
Q 017030 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLP 165 (378)
Q Consensus 86 ~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~d~~~~l~~h~~~~~~~ti~~~~ 165 (378)
....+.+++..+.. ....|+.||+++++.+++++... ..++|++++||+++..++.++++.|.++++++|+++.+
T Consensus 88 ~~~~v~i~~~~~~~--~~~~~~~Gt~~al~~a~~~l~~~---~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~ 162 (420)
T 3brk_X 88 RNESFDILPASQRV--SETQWYEGTADAVYQNIDIIEPY---APEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLE 162 (420)
T ss_dssp GTCEEEEECCC---------CCCCHHHHHHTTHHHHHHH---CCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEE
T ss_pred ccCCEEEeCccccc--cCCccccCCHHHHHHHHHHHHhc---CCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEee
Confidence 01124455433220 00123469999999999888520 03789999999999889999999999999999999987
Q ss_pred cCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCC--
Q 017030 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT-- 243 (378)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~-- 243 (378)
.+...+..||++..|++++|..|.|||...... + ....++++++|+|+|++++|.+++++..+.
T Consensus 163 ~~~~~~~~~g~v~~d~~g~v~~~~ekp~~~~~~--~------------~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~ 228 (420)
T 3brk_X 163 VPRMEATGFGVMHVNEKDEIIDFIEKPADPPGI--P------------GNEGFALASMGIYVFHTKFLMEAVRRDAADPT 228 (420)
T ss_dssp EETTGGGGSEEEEECTTSBEEEEEESCSSCCCB--T------------TBTTEEEEEEEEEEEEHHHHHHHHTSSCCC--
T ss_pred cCccccCcccEEEECCCCcEEEeEeCCCccccc--c------------ccccceEEeeeeEEEeHHHHHHHHHHhcccCC
Confidence 643336789999998889999999998643210 0 001246899999999999887676553221
Q ss_pred -CCchhcccccccccccceEEEEe-----------cceEEecCCHHHHHHHHHhcccCCCCccccCCCCcEEccCCCCCC
Q 017030 244 -ANDFGSEIIPASANEQFLKAYLF-----------NDYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPP 311 (378)
Q Consensus 244 -~~~~~~~~l~~l~~~~~i~~~~~-----------~~~~~~i~t~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~i~~~ 311 (378)
..++..++++.+++++++++|.+ +++|.||+|++||.+|+++++++.+...++.+.+.+++.+.+.++
T Consensus 229 ~~~~~~~d~l~~li~~g~v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~~~~~~~~~~~~i~~~~~i~~~ 308 (420)
T 3brk_X 229 SSRDFGKDIIPYIVEHGKAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVVPDLDIYDKSWPIWTYAEITPP 308 (420)
T ss_dssp --------CTTHHHHHSCEEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSSCSSCTTCCSSCCCCCCCCCCC
T ss_pred ccccchHHHHHHHhhhCcEEEEEeccccccccccCCCEEEECCCHHHHHHHHHHHhCCCchhhcCCCCCceeeccccCCC
Confidence 22455688888888789999999 899999999999999999999887666667777778888888888
Q ss_pred ceee------CceeeeeEEecCcEEcceEEeeceEcCCCEECCCCEEeeeeeCCCCeEeeeeeeeeeeEee
Q 017030 312 SKID------DSKIVDSIISHGSFITSSFIEHSVVGIRSRINANVHLKVSPANPLCRRIWKCSSLCSVICM 376 (378)
Q Consensus 312 ~~i~------~~~i~~s~Ig~~~~I~~~~i~~SiI~~~~~Ig~~~~i~~sIi~~~~~~~~~~~~~~~~~~~ 376 (378)
+.|. ++.++++.||+||.|.++.|.+|+||++|+||+||.|.+|+|++++.|+.+|.+.+++|+.
T Consensus 309 ~~i~~~~~~~~~~i~~~~ig~~~~I~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~~~i~~~~~i~~~~ig~ 379 (420)
T 3brk_X 309 AKFVHDDEDRRGSAVSSVVSGDCIISGAALNRSLLFTGVRANSYSRLENAVVLPSVKIGRHAQLSNVVIDH 379 (420)
T ss_dssp CEEECBCSSCBCEEESCEECSSCEEESCEEESCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEECT
T ss_pred cEEecccccCCcEecCCEECCCCEEcCCEEeCcEEcCCCEECCCCEEcceEEcCCCEECCCCEEeceEECC
Confidence 8883 5677788888888887677888888888888888888888888888888888887776653
No 3
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=9.9e-41 Score=327.94 Aligned_cols=236 Identities=19% Similarity=0.226 Sum_probs=179.9
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccC
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~ 86 (378)
.++.+||||||.||||+|+| ||||+||+|| |||+|+|++|.++|+++|+|+++|..+++++|+.+.. ..|+
T Consensus 11 ~~~~vvILAaG~GtRm~~~~---pK~l~pv~gk-p~i~~~l~~~~~~g~~~i~vv~~~~~~~i~~~~~~~~-----~~~~ 81 (501)
T 3st8_A 11 GDTAVLVLAAGPGTRMRSDT---PKVLHTLAGR-SMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELA-----DTLG 81 (501)
T ss_dssp -CEEEEEEECSCCGGGCCSS---CGGGCEETTE-EHHHHHHHHHHHHCCSEEEEEECTTHHHHHHHHHHHH-----HHHT
T ss_pred CCceEEEECCcCcccCCCCC---CHHHeEECCh-hHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHHH-----HhcC
Confidence 45789999999999999976 9999999999 9999999999999999999999999999999997532 1222
Q ss_pred CceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEecC-HHHHHHHHHHcCCcEEEEEe
Q 017030 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQNHRQSGADITISCL 164 (378)
Q Consensus 87 ~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~~d-~~~~l~~h~~~~~~~ti~~~ 164 (378)
.. +.++ .|.+ ++|||+|++++++++.+. ..+++++++||. ++..+ +.+++++|++.++++|+++.
T Consensus 82 ~~-i~~~--~q~~-------~lGTa~Av~~a~~~l~~~---~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~ 148 (501)
T 3st8_A 82 RT-IDVA--LQDR-------PLGTGHAVLCGLSALPDD---YAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTT 148 (501)
T ss_dssp SC-CEEE--ECSS-------CCCHHHHHHHHHTTSCTT---CCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred Cc-EEEE--EcCC-------CCCcHHHHHHHHHHhccc---cccceeeecCcceeecHHHHHHHHHHHhhccccceEeee
Confidence 22 2222 2332 479999999999998642 147899999998 55544 89999999999999999999
Q ss_pred ecCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCCC
Q 017030 165 PMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTA 244 (378)
Q Consensus 165 ~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~ 244 (378)
+.++ +..||.+..|++|+|.++.||++..... ...+++++|+|+|+++.|.++++.....
T Consensus 149 ~~~d--p~~yG~i~~~~~g~v~~ivEk~~~~~~~-----------------~~i~~in~Giy~f~~~~l~~~l~~l~~~- 208 (501)
T 3st8_A 149 TLDD--PFGYGRILRTQDHEVMAIVEQTDATPSQ-----------------REIREVNAGVYAFDIAALRSALSRLSSN- 208 (501)
T ss_dssp ECSC--CTTSCEEEECTTCCEEEEECGGGCCHHH-----------------HHCCEEEEEEEEEEHHHHHHHHTTCCCC-
T ss_pred ccCC--chhccccccccceeEEeeccccCCChhh-----------------ccceeeeceeeeecchhHHHhhhhhccc-
Confidence 9887 7899999999999999999998764321 1246899999999999998887764332
Q ss_pred Cchhccccccc----cc-ccceEEEEecceEE--ecCCHHHHHHHHH
Q 017030 245 NDFGSEIIPAS----AN-EQFLKAYLFNDYWE--DIGTIRSFFEANL 284 (378)
Q Consensus 245 ~~~~~~~l~~l----~~-~~~i~~~~~~~~~~--~i~t~~~~~~a~~ 284 (378)
+...+.++.+. .. +..+..+..+.+|. .+++..++.++..
T Consensus 209 n~~~e~yltd~i~~~~~~g~~v~~~~~~~~~~~~g~n~~~~l~~~~~ 255 (501)
T 3st8_A 209 NAQQELYLTDVIAILRSDGQTVHASHVDDSALVAGVNNRVQLAELAS 255 (501)
T ss_dssp STTCSCCTTHHHHHHHHTTCCEEEEECSSGGGGCCCSSHHHHHHHHH
T ss_pred ccccccchhhHHHHHHhcCceEEEEeccchhhhcccccHHHHHHHHH
Confidence 22223333333 33 45677777776654 4555665555544
No 4
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=100.00 E-value=2.5e-40 Score=323.09 Aligned_cols=318 Identities=19% Similarity=0.229 Sum_probs=243.3
Q ss_pred ceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccCC
Q 017030 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (378)
Q Consensus 8 ~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 87 (378)
.-+|||||||.|+||++ .+||+|+|++|+ |||+|++++|.++|+++|+|++++..+++.+++.+ +
T Consensus 11 ~~~~vIlAaG~g~R~~~---~~pK~l~~i~gk-pli~~~l~~l~~~g~~~iivv~~~~~~~i~~~~~~------~----- 75 (468)
T 1hm9_A 11 SNFAIILAAGKGTRMKS---DLPKVLHKVAGI-SMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAG------Q----- 75 (468)
T ss_dssp CEEEEEECCCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHTTCCSEEEEEECTTHHHHHHSSSS------S-----
T ss_pred CCcEEEEcCCCCccCCC---CCCcEeeEECCc-cHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHhCC------C-----
Confidence 35899999999999984 689999999999 99999999999999999999999887777666532 1
Q ss_pred ceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe--EEecCHHHHHHHHHHcCCcEEEEEee
Q 017030 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH--LYRMDYMDFVQNHRQSGADITISCLP 165 (378)
Q Consensus 88 ~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~--~~~~d~~~~l~~h~~~~~~~ti~~~~ 165 (378)
+.++.... ..|++++++.++++++.. .++|++++||. +...++.++++.|.+.++++++++.+
T Consensus 76 --i~~v~~~~---------~~G~~~sl~~a~~~~~~~----~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~ 140 (468)
T 1hm9_A 76 --TEFVTQSE---------QLGTGHAVMMTEPILEGL----SGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAE 140 (468)
T ss_dssp --SEEEECSS---------CCCHHHHHHTTHHHHTTC----CSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred --cEEEeCCc---------cCChHHHHHHHHHHhccC----CCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEec
Confidence 22222111 369999999999988521 37999999999 45566999999999988999998888
Q ss_pred cCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCC--
Q 017030 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT-- 243 (378)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~-- 243 (378)
..+ +..||.+..|++++|..+.|||...... ..++++++|+|+|+++.|.+.+++..+.
T Consensus 141 ~~~--~~~~g~v~~d~~g~v~~~~ek~~~~~~~-----------------~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~ 201 (468)
T 1hm9_A 141 TDN--PFGYGRIVRNDNAEVLRIVEQKDATDFE-----------------KQIKEINTGTYVFDNERLFEALKNINTNNA 201 (468)
T ss_dssp CSC--CTTSCEEEECTTCCEEEEECTTTCCTTG-----------------GGCCEEEEEEEEEEHHHHHHHHTTCCSCST
T ss_pred cCC--CCceeEEEECCCCCEEEEEECCCCChHH-----------------hcCeEEEEEEEEEEHHHHHHHHHhhccccC
Confidence 765 5679999998889999999987532100 0236889999999999776666553222
Q ss_pred -CCchhcccccccccc-cceEEEEecceEEe--cCCHHHHHHHHHhcccCC-------------CCcc------------
Q 017030 244 -ANDFGSEIIPASANE-QFLKAYLFNDYWED--IGTIRSFFEANLALTAHP-------------PMFS------------ 294 (378)
Q Consensus 244 -~~~~~~~~l~~l~~~-~~i~~~~~~~~~~~--i~t~~~~~~a~~~~l~~~-------------~~~~------------ 294 (378)
...+..++++.+++. .++++|.++++|.+ ++|++||..|+..+..+. +...
T Consensus 202 ~~~~~~~d~~~~l~~~g~~v~~~~~~g~~~~i~i~t~~dl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~ 281 (468)
T 1hm9_A 202 QGEYYITDVIGIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEV 281 (468)
T ss_dssp TCSCCTTHHHHHHHHHTCCEEEEECSSGGGGCCCCSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGCEECTTCEECTTC
T ss_pred CCeEEHHHHHHHHHHCCCEEEEEEcCChHHhhCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEECCCeeEECCCcEECCCC
Confidence 122335677777775 58999999999977 559999999987654221 1111
Q ss_pred ccCCCCcEEccCCCCCCcee-eCceeeeeEEecCcEEcceEEeeceEcCCCEECCCCEEe-eeeeCCCCeEeeeeeeeee
Q 017030 295 FYDATKPIYTSRRNLPPSKI-DDSKIVDSIISHGSFITSSFIEHSVVGIRSRINANVHLK-VSPANPLCRRIWKCSSLCS 372 (378)
Q Consensus 295 ~~~~~~~i~~~~~i~~~~~i-~~~~i~~s~Ig~~~~I~~~~i~~SiI~~~~~Ig~~~~i~-~sIi~~~~~~~~~~~~~~~ 372 (378)
.+.+.+.+.+++.|++++.| .++.|.+|.||+||.|+++.|.+|+||++|+||+++.|. +++|+++++|+++|.+..+
T Consensus 282 ~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~ig~~~~i~~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~~ 361 (468)
T 1hm9_A 282 QIEANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVITNSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGS 361 (468)
T ss_dssp EECSSCEEESSCEECTTCEECTTCEEESCEECTTCEECSCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEESC
T ss_pred EECCCcEECCCCEECCCCEECCCCEEeccEEeCCcEEEEEEEeccccCCCcEECCceEEecCcEECCccEECCCcEEeee
Confidence 22334444556666666666 577888889999999988888999999999999999998 8999999999998888655
Q ss_pred eE
Q 017030 373 VI 374 (378)
Q Consensus 373 ~~ 374 (378)
+|
T Consensus 362 ~I 363 (468)
T 1hm9_A 362 SI 363 (468)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 5
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=2e-39 Score=310.58 Aligned_cols=301 Identities=19% Similarity=0.246 Sum_probs=214.3
Q ss_pred eeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccCCc
Q 017030 9 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDG 88 (378)
Q Consensus 9 ~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~~~ 88 (378)
|+|||||||.|+||+|+|...||+|+|++|+ |||+|++++|.++|+++|+|++++. +.+++.+.. . +
T Consensus 1 m~aiIlA~G~g~R~~plt~~~~K~ll~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~---i~~~~~~~~---~----~-- 67 (401)
T 2ggo_A 1 MKAFILAAGSGERLEPITHTRPKAFVPILSK-PLIEYQIEYLRKCGIRDITVIVSSK---NKEYFEKKL---K----E-- 67 (401)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGG---GHHHHHHHC---T----T--
T ss_pred CeEEEEcCcCccccCcccCCCCcceeeECCE-eHHHHHHHHHHHCCCCEEEEEeCHH---HHHHhhccC---C----c--
Confidence 6899999999999999999999999999999 9999999999999999999999876 666665431 0 1
Q ss_pred eEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEe--cCHHHHHHHHHHcCCcEEEEEeec
Q 017030 89 CVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYR--MDYMDFVQNHRQSGADITISCLPM 166 (378)
Q Consensus 89 ~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~--~d~~~~l~~h~~~~~~~ti~~~~~ 166 (378)
+.++.... ++.|++++++.+.+ .++|++++||+++. .++.++++ .+++++++.+.
T Consensus 68 -i~~~~~~~--------~~~g~~~~l~~~~~---------~~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~ 124 (401)
T 2ggo_A 68 -ISIVTQKD--------DIKGTGAAILSAKF---------NDEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKV 124 (401)
T ss_dssp -CEEEECCT--------TCCBSTTTGGGCCC---------SSEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEEC
T ss_pred -EEEEeCCC--------CCCChHHHHHHhcc---------CCCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEc
Confidence 22332211 12588888876532 37899999999876 44666665 46788888887
Q ss_pred CCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCC-CC
Q 017030 167 DDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT-AN 245 (378)
Q Consensus 167 ~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~-~~ 245 (378)
.+ +..|+.+..+++|++..+.|||..+. ++++++|+|+|++++|+. ++...+. ..
T Consensus 125 ~~--~~~~~~v~~~~~g~v~~~~ek~~~~~---------------------~~~~~~Giy~~~~~~~~~-l~~~~~~~~~ 180 (401)
T 2ggo_A 125 SN--PKDYGVLVLDNQNNLSKIIEKPEIPP---------------------SNLINAGIYKLNSDIFTY-LDKISISERG 180 (401)
T ss_dssp SC--CSSSCEEEECTTSSEEEEECSCSSCS---------------------CSEEEEEEEEEETHHHHH-HHHSCCCSSS
T ss_pred CC--CcceeEEEECCCCeEEEEEECCCCCC---------------------CcEEEEEEEEEcHHHHHH-hhhcCcCCCC
Confidence 65 56789888888899999999886432 367899999999999854 4543221 11
Q ss_pred c-hhccccccccc-ccceEEEEecceEEecCCHHHHHHHHHhcccCCCC---ccccCCCCcEEccC--------------
Q 017030 246 D-FGSEIIPASAN-EQFLKAYLFNDYWEDIGTIRSFFEANLALTAHPPM---FSFYDATKPIYTSR-------------- 306 (378)
Q Consensus 246 ~-~~~~~l~~l~~-~~~i~~~~~~~~~~~i~t~~~~~~a~~~~l~~~~~---~~~~~~~~~i~~~~-------------- 306 (378)
. ...++++.+ . +.++..+..+++|.||+||+||.+|++.++++... ...+++.+.+.+.+
T Consensus 181 ~~~~~~~~~~~-~~g~~v~~~~~~~~~~dI~t~edl~~a~~~l~~~~~~~~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i 259 (401)
T 2ggo_A 181 ELELTDAINLM-AKDHRVKVIEYEGYWMDIGKPWNIIDVNKWALDNLVFSQNLGNVEDNVKIKGKVIIEEDAEIKSGTYI 259 (401)
T ss_dssp CBCHHHHHHHH-HHHSCEEEEECCSCEEECCSHHHHHHHHHHHHHHTCCCEECSEECSSCEEESCEEECTTCEECTTCEE
T ss_pred ceEHHHHHHHH-HCCCcEEEEEecceEEcCCCHHHHHHHHHHHHHhcccccccceeCCCCEEcCCeEEcCCCEECCCCEE
Confidence 1 123566666 4 35899999999999999999999999988765320 01222222222222
Q ss_pred ----CCCCCcee-eCceee-eeEEecCcEEc-ceEEeeceEcCCCEECCCCEEeeeeeCCCCeEeeeeeee
Q 017030 307 ----RNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKVSPANPLCRRIWKCSSL 370 (378)
Q Consensus 307 ----~i~~~~~i-~~~~i~-~s~Ig~~~~I~-~~~i~~SiI~~~~~Ig~~~~i~~sIi~~~~~~~~~~~~~ 370 (378)
.|++++.| .++.|. ++.||+||.|+ ++.|.+|+|+++++|+.++.|.+++|++++.|+.+|.+.
T Consensus 260 ~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~ 330 (401)
T 2ggo_A 260 EGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVIAEDVNFGAGTLIA 330 (401)
T ss_dssp ESSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEESCEECTTCEECTTCEEC
T ss_pred eCCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcceEECCCcEECCCcEEc
Confidence 23333333 334443 56677777777 677777777777777777777777777777777777764
No 6
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=100.00 E-value=1.4e-38 Score=309.95 Aligned_cols=316 Identities=16% Similarity=0.190 Sum_probs=228.3
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccC
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~ 86 (378)
++|.|||||||.|+||+| ++||+|+|++|+ |||+|+++.|.++|+++|+|++++..+++.+++.+. +
T Consensus 7 ~~~~aiIlA~G~g~Rl~~---~~pK~l~~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~i~~~~~~~---------~ 73 (459)
T 4fce_A 7 SSMSVVILAAGKGTRMYS---DLPKVLHPLAGK-PMVQHVIDAAMKLGAQHVHLVYGHGGELLKKTLADP---------S 73 (459)
T ss_dssp CCEEEEEEECCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHHHTCSCEEEEESSCHHHHHHHC-------------
T ss_pred CcceEEEECCCCCccCCC---CCCcccCeeCCe-eHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhccC---------C
Confidence 579999999999999996 689999999999 999999999999999999999998888887776431 1
Q ss_pred CceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe--EEecCHHHHHHHHHHcCCcEEEEEe
Q 017030 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH--LYRMDYMDFVQNHRQSGADITISCL 164 (378)
Q Consensus 87 ~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~--~~~~d~~~~l~~h~~~~~~~ti~~~ 164 (378)
+.++.... ..|++++++.++++++. .++|++++||. +...++.++++.|.+ .+++++..
T Consensus 74 ---~~~v~~~~---------~~g~~~~i~~~~~~~~~-----~~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~ 134 (459)
T 4fce_A 74 ---LNWVLQAE---------QLGTGHAMQQAAPHFAD-----DEDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTV 134 (459)
T ss_dssp ----CEEECSS---------CCCHHHHHHHHGGGSCT-----TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEE
T ss_pred ---cEEEeCCC---------CCCcHHHHHHHHHhcCC-----CCcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEE
Confidence 22222111 36999999999988863 48999999999 445558999988754 56777777
Q ss_pred ecCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCC-
Q 017030 165 PMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT- 243 (378)
Q Consensus 165 ~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~- 243 (378)
+..+ +..||.+..+ ++++..+.|||...... ..++++++|+|+|+++.|.++++.....
T Consensus 135 ~~~~--~~~~g~v~~~-~g~v~~~~ek~~~~~~~-----------------~~~~~~~~Giy~~~~~~l~~~l~~~~~~~ 194 (459)
T 4fce_A 135 KLDN--PSGYGRIVRE-NGDVVGIVEHKDASDAQ-----------------REINEINTGILVANGRDLKRWLSLLDNNN 194 (459)
T ss_dssp ECSC--CTTSCEEEEE-TTEEEEEECGGGCCTTG-----------------GGCCEEEEEEEEEEHHHHHHHHHTCCCCS
T ss_pred ecCC--CCcccEEEeC-CCcEEEEEECCCCChHH-----------------hhccEEEEEEEEEEHHHHHHHHHHhCccc
Confidence 7665 5679998887 79999999987532210 1246789999999999887777654221
Q ss_pred --CCchhcccccccccc-cceEEEEecceE--EecCCHHHHHHHHHhcccCC-------------CCc------------
Q 017030 244 --ANDFGSEIIPASANE-QFLKAYLFNDYW--EDIGTIRSFFEANLALTAHP-------------PMF------------ 293 (378)
Q Consensus 244 --~~~~~~~~l~~l~~~-~~i~~~~~~~~~--~~i~t~~~~~~a~~~~l~~~-------------~~~------------ 293 (378)
...+..+.++.+... .++.++..+++| .+|+||+||..|+..+..+. |..
T Consensus 195 ~~~~~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tp~Dl~~ae~~l~~~~~~~l~~~~~~~~~p~~~~~~~~~~ig~~ 274 (459)
T 4fce_A 195 AQGEFYITDIIALAHADGKKIATVHPTRLSEVEGVNNRLQLSALERVFQTEQAEKLLLAGVMLLDPSRFDLRGELTHGRD 274 (459)
T ss_dssp TTCSCCTTHHHHHHHHTTCCEEEECCSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHHTCEESCGGGEEEEEEEEECSS
T ss_pred cCCcEEHHHHHHHHHHCCCeEEEEEcCCHHHhhCCCCHHHHHHHHHHHHHHHHHHHHhCCcEEeCCCeEEEeCcEEECCC
Confidence 122334566666554 589999998766 67999999999987654331 110
Q ss_pred cccCCCCcEEccCCCCCCcee-eCceeeeeEEecCcEEc-ceEEeeceEcCCCEECCCCEEe-eeeeCCCCeEeeeeeee
Q 017030 294 SFYDATKPIYTSRRNLPPSKI-DDSKIVDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLK-VSPANPLCRRIWKCSSL 370 (378)
Q Consensus 294 ~~~~~~~~i~~~~~i~~~~~i-~~~~i~~s~Ig~~~~I~-~~~i~~SiI~~~~~Ig~~~~i~-~sIi~~~~~~~~~~~~~ 370 (378)
..+.+.+.+..++.|++++.| .++.|.++.||+||.|+ ++.|.+++||++|.||+++.|. +++|+++++|+++|.+.
T Consensus 275 ~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~~i~ 354 (459)
T 4fce_A 275 ITIDTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIK 354 (459)
T ss_dssp CEECTTEEEEEEEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTTCEECSSEEECTTCEECTTCEEEEEEEEE
T ss_pred cEECCCeeeccceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCCCEECCccEECCCcEECCCcEECCCeEEe
Confidence 112233333344445555555 46666777777777777 7777777777777777777776 67777777777777766
Q ss_pred eeeE
Q 017030 371 CSVI 374 (378)
Q Consensus 371 ~~~~ 374 (378)
.+++
T Consensus 355 ~~~i 358 (459)
T 4fce_A 355 KARL 358 (459)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 5554
No 7
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=100.00 E-value=4.5e-38 Score=306.11 Aligned_cols=311 Identities=17% Similarity=0.198 Sum_probs=210.6
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccC
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~ 86 (378)
+++.|||||||.|+||++ .+||+|+|++|+ |||+|+++.|.++|+++|+|++++..+++.+++.+. +
T Consensus 4 ~~~~aiIlA~G~g~Rl~~---~~pK~l~~i~gk-pli~~~l~~l~~~~~~~iivv~~~~~~~i~~~~~~~-----~---- 70 (456)
T 2v0h_A 4 KALSAVILAAGKGTRMYS---DLPKVLHTIAGK-PMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLANE-----Q---- 70 (456)
T ss_dssp CCEEEEEECCCCCGGGCS---SSCGGGSEETTE-EHHHHHHHHHHHTTCSCEEEEECTTHHHHHHHTTTC-----C----
T ss_pred CcceEEEECCCCCcccCC---CCCccccEECCc-cHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhhcC-----C----
Confidence 568999999999999984 689999999999 999999999999999999999998877777776421 1
Q ss_pred CceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe--EEecCHHHHHHHHHHcCCcEEEEEe
Q 017030 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH--LYRMDYMDFVQNHRQSGADITISCL 164 (378)
Q Consensus 87 ~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~--~~~~d~~~~l~~h~~~~~~~ti~~~ 164 (378)
++++.... ..|++++++.+++++.. .+++++++||. +...++.++++.|.+ ++++++..
T Consensus 71 ---~~~v~~~~---------~~g~~~~~~~~~~~~~~-----~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~ 131 (456)
T 2v0h_A 71 ---VNWVLQTE---------QLGTAHAVQQAAPFFKD-----NENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTV 131 (456)
T ss_dssp ---CEEEECSC---------CCCHHHHHHHHGGGCCT-----TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEE
T ss_pred ---cEEEeCCC---------CCCcHHHHHHHHHhcCC-----CCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEe
Confidence 22222111 36999999999888753 48999999999 445568999988765 57788877
Q ss_pred ecCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCC-
Q 017030 165 PMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT- 243 (378)
Q Consensus 165 ~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~- 243 (378)
+..+ +..|+.+..+ ++++..+.||+...... ...+++++|+|+|+++.|.+.++...+.
T Consensus 132 ~~~~--~~~~g~v~~~-~g~v~~~~ek~~~~~~~-----------------~~~~~~~~Giy~~~~~~l~~~l~~~~~~~ 191 (456)
T 2v0h_A 132 NLDN--PTGYGRIIRE-NGNVVAIVEQKDANAEQ-----------------LNIKEVNTGVMVSDGASFKKWLARVGNNN 191 (456)
T ss_dssp ECSS--CTTSCEEEEE-TTEEEEEECTTTCCHHH-----------------HTCCEEEEEEEEEEHHHHHHHHTTCCCCS
T ss_pred ecCC--CCccceEEEc-CCcEEEEEECCCCChhH-----------------hcCcEEEEEEEEEEHHHHHHHHHHhcccc
Confidence 7665 5678988887 78999999987642110 0236789999999999776676543221
Q ss_pred --CCchhcccccccccc-cceEEEEecce--EEecCCHHHHHHHHHhcccCC------CCccccCC-CCcEEccCCCCCC
Q 017030 244 --ANDFGSEIIPASANE-QFLKAYLFNDY--WEDIGTIRSFFEANLALTAHP------PMFSFYDA-TKPIYTSRRNLPP 311 (378)
Q Consensus 244 --~~~~~~~~l~~l~~~-~~i~~~~~~~~--~~~i~t~~~~~~a~~~~l~~~------~~~~~~~~-~~~i~~~~~i~~~ 311 (378)
...+..++++.+... .++..+..+++ |.+|+||+||.+|++.+..+. ....++++ ...+.+.+.++++
T Consensus 192 ~~~~~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tpeDl~~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~ 271 (456)
T 2v0h_A 192 AQGEYYLTDLIALANQDNCQVVAVQATDVMEVEGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGKD 271 (456)
T ss_dssp TTCCCCGGGHHHHHHHTTCCEEEEECSCTGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEEEEEEEECSS
T ss_pred ccccEEHHHHHHHHHHcCCEEEEEEeCCcceEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCEEECCCccEEcCceEECCC
Confidence 112235666666654 57999998765 569999999999998665331 11112222 2233444444444
Q ss_pred cee-eCcee-eeeEEecCcEEc-ceEEeeceEcCCCEECCCCEEeeeeeCCCCeEeeeeee
Q 017030 312 SKI-DDSKI-VDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKVSPANPLCRRIWKCSS 369 (378)
Q Consensus 312 ~~i-~~~~i-~~s~Ig~~~~I~-~~~i~~SiI~~~~~Ig~~~~i~~sIi~~~~~~~~~~~~ 369 (378)
+.| .++.| .++.||+||.|+ ++.|.+|+||++|+|++++.|.+++|++++.|+.+|.+
T Consensus 272 ~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i 332 (456)
T 2v0h_A 272 VEIDVNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRL 332 (456)
T ss_dssp CEECSSEEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTTCEECSSEEE
T ss_pred CEEcCCcEEcCCcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCCcEECCccEE
Confidence 444 23333 244555555555 45555555555555555555555555555555444444
No 8
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=100.00 E-value=4.5e-38 Score=286.72 Aligned_cols=243 Identities=20% Similarity=0.285 Sum_probs=193.5
Q ss_pred ceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcc---
Q 017030 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVT--- 84 (378)
Q Consensus 8 ~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~--- 84 (378)
.|+|||||||.|+||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|+++++.+++.+|+.+.+.+.....
T Consensus 2 ~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~ 80 (281)
T 3juk_A 2 IKKCLFPAAGYGTRFLPITKTIPKEMLPIVDK-PLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN 80 (281)
T ss_dssp CCEEEEECCSCCGGGTTGGGTSCGGGCBSSSS-BHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHTSCCC--------CC
T ss_pred ceEEEEECCcCCcccCccccCCCcccceECCE-EHHHHHHHHHHhCCCCEEEEEecCCHHHHHHHHhcchhhhhhhhccc
Confidence 58999999999999999999999999999999 99999999999999999999999999999998864321111000
Q ss_pred ------------cCCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEecC-----HHH
Q 017030 85 ------------FGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-----YMD 147 (378)
Q Consensus 85 ------------~~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~d-----~~~ 147 (378)
++.. +.++ .+. .+.||+++++.++.+++ +++|+|++||.+++.+ +.+
T Consensus 81 ~~~~~~~~~~~~~~~~-i~~~--~~~-------~~~Gt~~al~~a~~~l~------~~~~lv~~~D~~~~~~~~~~~l~~ 144 (281)
T 3juk_A 81 KENALKSIRNIIEKCC-FSYV--RQK-------QMKGLGHAILTGEALIG------NEPFAVILADDLCISHDHPSVLKQ 144 (281)
T ss_dssp HHHHHHHHHHHHHHCE-EEEE--ECS-------SCCCHHHHHHHTHHHHC------SSCEEEECTTEEEECTTSCCHHHH
T ss_pred chhhhhhhhccccCcc-EEEE--ecC-------CCCCcHHHHHHHHHHcC------CCCEEEEeCCeeccCccchHHHHH
Confidence 1111 2222 222 13699999999999986 3799999999999998 999
Q ss_pred HHHHHHHcCCcEEEEEeecCCCCCCcceEEEECC--CC--CEEEEEecCCccchhcccccchhccccccccccCcceeee
Q 017030 148 FVQNHRQSGADITISCLPMDDSRASDFGLMKINN--EG--RVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASM 223 (378)
Q Consensus 148 ~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d~--~~--~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (378)
+++.|.++++ .++++.+.+...+..||++..++ +| +|..+.|||..... .++++++
T Consensus 145 l~~~~~~~~~-~~v~~~~~~~~~~~~~g~v~~~~~~~g~~~v~~~~Ekp~~~~~-------------------~~~~~~~ 204 (281)
T 3juk_A 145 MTSLYQKYQC-SIVAIEEVALEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQEDA-------------------PSNLAVI 204 (281)
T ss_dssp HHHHHHHHCS-CEEEEEECCTTTGGGSEEEEEEEEETTEEEEEEEEESCCTTTC-------------------SCSEEEE
T ss_pred HHHHHHHcCC-CEEEEEEechhhcccCCEEEeccCCCCceEEeEEEECcCCCCC-------------------CcceeEE
Confidence 9999988877 67777777554578899999876 78 99999999974321 2467899
Q ss_pred eEEEEeHHHHHHHHhhhCCC---CCchhcccccccccccceEEEEecceEEecCCHHHHHHHHHhcccC
Q 017030 224 GVYLFKKEILLNLLRWRFPT---ANDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAH 289 (378)
Q Consensus 224 Giy~~~~~~l~~~l~~~~~~---~~~~~~~~l~~l~~~~~i~~~~~~~~~~~i~t~~~~~~a~~~~l~~ 289 (378)
|+|+|++++|+ .++...+. ..+ ..++++.++.++++.+|.++++|.|||||++|.+|++.+++.
T Consensus 205 GiYi~~~~~l~-~l~~~~~~~~~e~~-l~d~i~~l~~~~~v~~~~~~g~~~dIgt~~d~~~a~~~l~~~ 271 (281)
T 3juk_A 205 GRYILTPDIFE-ILSETKPGKNNEIQ-ITDALRTQAKRKRIIAYQFKGKRYDCGSVEGYIEASNAYYKK 271 (281)
T ss_dssp EEEEECTTHHH-HHHTCCCCGGGSCC-HHHHHHHHHHHSCCEEEECCSEEEETTSHHHHHHHHHHHHHH
T ss_pred EEEEECHHHHH-HHHhcCCCCCCcee-HHHHHHHHHhcCCEEEEEeCCeEEcCCCHHHHHHHHHHHHhc
Confidence 99999999985 55543221 112 257788888888999999999999999999999999998764
No 9
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=100.00 E-value=1.5e-35 Score=268.14 Aligned_cols=236 Identities=22% Similarity=0.385 Sum_probs=191.2
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecC-hhhHHHHHHhhccCCCCccc
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYN-SASLNRHLARAYNYGSGVTF 85 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~-~~~i~~~l~~~~~~~~~~~~ 85 (378)
+.|+|||||||.|+||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|++++. .+++.+++.. +..|
T Consensus 23 ~~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i~g~-pli~~~l~~l~~~g~~~iivv~~~~~~~~~~~~~~~------~~~~ 95 (269)
T 4ecm_A 23 NAMKGIILAGGTGSRLYPITKVTNKHLLPVGRY-PMIYHAVYKLKQCDITDIMIITGKEHMGDVVSFLGS------GQEF 95 (269)
T ss_dssp -CEEEEEECCSCCGGGTTTTSSSCGGGSEETTE-EHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT------SGGG
T ss_pred cCcEEEEECCCCccccccccCCCCceecEECCE-EHHHHHHHHHHHCCCCEEEEECChhhHHHHHHHHhh------cccc
Confidence 468999999999999999999999999999999 9999999999999999999999865 3667777643 2344
Q ss_pred CCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEecCHHHHHHHHHHcCCcEEEEEee
Q 017030 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLP 165 (378)
Q Consensus 86 ~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~d~~~~l~~h~~~~~~~ti~~~~ 165 (378)
+... .+.. +.. ..|++++++.+.++++ .++|++++||+++..++.++++.|.++++++++++.+
T Consensus 96 ~~~i-~~~~--~~~-------~~G~~~al~~a~~~~~------~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~ 159 (269)
T 4ecm_A 96 GVSF-TYRV--QDK-------AGGIAQALGLCEDFVG------NDRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQS 159 (269)
T ss_dssp TCEE-EEEE--CSS-------CCCHHHHHHTTHHHHT------TSEEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEEE
T ss_pred CceE-EEee--CCc-------cCcHHHHHHHHHHhcC------CCcEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEEE
Confidence 4332 2221 211 3699999999998886 3899999999999988999999999989999999988
Q ss_pred cCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCC-C
Q 017030 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT-A 244 (378)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~-~ 244 (378)
.++ +..||++..+ +|+|..+.|||.... ++++++|+|+|++++|+ .+++..+. .
T Consensus 160 ~~~--~~~~g~v~~d-~g~v~~~~ekp~~~~---------------------~~~~~~Giy~~~~~~l~-~l~~~~~~~~ 214 (269)
T 4ecm_A 160 VDD--PERFGVANIQ-NRKIIEIEEKPKEPK---------------------SSYAVTGIYLYDSKVFS-YIKELKPSAR 214 (269)
T ss_dssp CSC--GGGSEEEEEE-TTEEEEEEESCSSCS---------------------CSEEEEEEEEECTTHHH-HHTSCCBCTT
T ss_pred CCC--CCCceEEEEc-CCEEEEEEECCCCCC---------------------CcEEEEEEEEECHHHHH-hhhhcCCCCC
Confidence 775 5789999987 489999999985432 36789999999999884 44443221 1
Q ss_pred Cch-hcccccccccccceEEEEecceEEecCCHHHHHHHHHhcccCC
Q 017030 245 NDF-GSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAHP 290 (378)
Q Consensus 245 ~~~-~~~~l~~l~~~~~i~~~~~~~~~~~i~t~~~~~~a~~~~l~~~ 290 (378)
.++ ..++++.++.++++.++.++++|.||+||+||.+|++.+++..
T Consensus 215 ge~~l~d~l~~l~~~g~v~~~~~~~~~~dIgt~~dl~~a~~~l~~~~ 261 (269)
T 4ecm_A 215 GELEITDINNWYLKRGVLTYNEMSGWWTDAGTHVSLQRANALARDIN 261 (269)
T ss_dssp SCBCHHHHHHHHHHTTCEEEEECCSCEEECSSHHHHHHHHHHTTTCC
T ss_pred CeeeHHHHHHHHHHcCCEEEEEeCCEEEeCCCHHHHHHHHHHHHhcc
Confidence 122 3567788888889999999999999999999999999988654
No 10
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=100.00 E-value=2e-34 Score=265.30 Aligned_cols=245 Identities=21% Similarity=0.316 Sum_probs=187.1
Q ss_pred ccceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCC-----
Q 017030 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYG----- 80 (378)
Q Consensus 6 ~~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~----- 80 (378)
++.|+|||||||.|+||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|++++..+++.+|+...+.+.
T Consensus 6 ~~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~ 84 (302)
T 2e3d_A 6 TKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDK-PLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEK 84 (302)
T ss_dssp CSCCEEEEECCSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHHSCCHHHHHHHC-
T ss_pred hcccEEEEECCcCcccCCccccCCCceeeEECCe-EHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHhcchhhhhhhhh
Confidence 3468999999999999999999999999999999 9999999999999999999999998888998885421000
Q ss_pred CC-c----------ccCCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEec------
Q 017030 81 SG-V----------TFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRM------ 143 (378)
Q Consensus 81 ~~-~----------~~~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~------ 143 (378)
.+ . .++.. +.++. +. .+.||+++++.++.++. .++|++++||++++.
T Consensus 85 ~~~~~~l~~~~~~~~~~~~-i~~~~--~~-------~~~Gt~~al~~a~~~~~------~~~~lv~~~D~~~~~~~~~~~ 148 (302)
T 2e3d_A 85 RVKRQLLDEVQSICPPHVT-IMQVR--QG-------LAKGLGHAVLCAHPVVG------DEPVAVILPDVILDEYESDLS 148 (302)
T ss_dssp ---CHHHHHHHHTSCTTCE-EEEEE--CS-------SCCCHHHHHHHTHHHHC------SSCEEEECTTEEECTTSSCTT
T ss_pred ccchhhhhhhhhccccCcc-eEEee--CC-------ccCCHHHHHHHHHHHcC------CCcEEEEcCCccccCccccch
Confidence 00 0 01111 22222 11 13699999999999885 379999999998872
Q ss_pred --CHHHHHHHHHHcCCcEEEEEeecCCCCCCcceEEEEC----CCC---CEEEEEecCCccchhcccccchhcccccccc
Q 017030 144 --DYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKIN----NEG---RVLSFSEKPKGKDLKAMAVDTTVLGLSKQEA 214 (378)
Q Consensus 144 --d~~~~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d----~~~---~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~ 214 (378)
++.++++.|.+.++ +|+++.+.++ +..||++..+ ++| +|..|.|||.....
T Consensus 149 ~~~l~~l~~~~~~~~~-~~i~~~~~~~--~~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~~~~----------------- 208 (302)
T 2e3d_A 149 QDNLAEMIRRFDETGH-SQIMVEPVAD--VTAYGVVDCKGVELAPGESVPMVGVVEKPKADVA----------------- 208 (302)
T ss_dssp TSTHHHHHHHHHHHCC-EEEEEEECSC--GGGSEEEECTTCCCCTTCEEEECEEEESCCTTTC-----------------
T ss_pred HHHHHHHHHHHHhcCC-cEEEEEEccC--CCCccEEEecccccCCCCceeEEEEEECCCCCcc-----------------
Confidence 69999999988777 7888777643 6779999863 456 89999999864221
Q ss_pred ccCcceeeeeEEEEeHHHHHHHHhhhCCC--CCchhcccccccccccceEEEEecceEEecCCHHHHHHHHHhcccCC
Q 017030 215 EEKPYIASMGVYLFKKEILLNLLRWRFPT--ANDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAHP 290 (378)
Q Consensus 215 ~~~~~~~~~Giy~~~~~~l~~~l~~~~~~--~~~~~~~~l~~l~~~~~i~~~~~~~~~~~i~t~~~~~~a~~~~l~~~ 290 (378)
.++++++|+|+|++++|+ .+++..+. ..-+..++++.+++++++.++.++++|.|||||++|.+|++.++...
T Consensus 209 --~~~~~~~Giyi~~~~~l~-~l~~~~~~~~~~~~l~d~i~~l~~~~~v~~~~~~~~~~DIgt~~d~~~a~~~~~~~~ 283 (302)
T 2e3d_A 209 --PSNLAIVGRYVLSADIWP-LLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRH 283 (302)
T ss_dssp --SCSEEEEEEEEECTTHHH-HHTCCCC----CCCHHHHHHHHHHHSCEEEEECCSCEEECSSHHHHHHHHHHHHHHC
T ss_pred --ccceEEEEEEEECHHHHH-HHHhhCCCCCCceehHHHHHHHHHhCCEEEEEeCCeEEcCCCHHHHHHHHHHHHhcC
Confidence 236789999999999884 44443221 11122466777777679999999999999999999999997765443
No 11
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=100.00 E-value=3e-34 Score=258.37 Aligned_cols=246 Identities=25% Similarity=0.327 Sum_probs=178.8
Q ss_pred ceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCccc--
Q 017030 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF-- 85 (378)
Q Consensus 8 ~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~-- 85 (378)
+|+|||||||.|+||+|+|.++||+|+||+|+ |||+|+++++.++|+++|+|++++..+++.+++.+....+.+..+
T Consensus 2 ~~~avIlAaG~gtRl~~lt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~ 80 (259)
T 1tzf_A 2 ASKAVILAGGLGTRLSEETIVKPKPMVEIGGK-PILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHM 80 (259)
T ss_dssp CCEEEEEECSCC--------CCCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTHHHHHHHHHTHHHHHSCEEEEG
T ss_pred CcEEEEECCCCcccCCCccCCCCccccEECCE-EHHHHHHHHHHHCCCCEEEEEcccCHHHHHHHHhhcccccccccccc
Confidence 48999999999999999999999999999999 999999999999999999999999888899888653100001110
Q ss_pred CCceEEEeccccCCC---cCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEecCHHHHHHHHHHcCCcEEEE
Q 017030 86 GDGCVEVLAATQTPG---EAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITIS 162 (378)
Q Consensus 86 ~~~~i~i~~~~~~~~---~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~d~~~~l~~h~~~~~~~ti~ 162 (378)
+...+.++....+.. ...+....||+++++.++.++.. .++|++++||.+++.++.++++.|.++++++|+.
T Consensus 81 ~~~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~~-----~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~ 155 (259)
T 1tzf_A 81 AENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKD-----DEAFLFTYGDGVADLDIKATIDFHKAHGKKATLT 155 (259)
T ss_dssp GGTEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTTT-----SSCEEEEETTEEECCCHHHHHHHHHHHCCSEEEE
T ss_pred cccceeeeeccccccceeeeecccccCcHHHHHHHHHhcCC-----CCcEEEEECCEecccCHHHHHHHHHHhCCeEEEE
Confidence 000112221100000 00011236999999999888842 4789999999999888999999998888888775
Q ss_pred EeecCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCC
Q 017030 163 CLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP 242 (378)
Q Consensus 163 ~~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~ 242 (378)
..+ . +..||.+..| +|+|..|.|||... .+++++|+|+|++++|+ .++.
T Consensus 156 ~~~--~--~~~~g~v~~~-~g~v~~~~ekp~~~----------------------~~~~~~Giy~~~~~~l~-~l~~--- 204 (259)
T 1tzf_A 156 ATF--P--PGRFGALDIQ-AGQVRSFQEKPKGD----------------------GAMINGGFFVLNPSVID-LIDN--- 204 (259)
T ss_dssp EEC--C--CCCSEEEEEE-TTEEEEEEESCSCC----------------------SCCEECCCEEECGGGGG-GCCS---
T ss_pred Eec--C--CCCccEEEEc-CCEEEEEEecCCCC----------------------CceEEEEEEEeCHHHHH-hhcc---
Confidence 433 2 5679999887 79999999998642 24789999999999884 3322
Q ss_pred CCCchhcccccccccccceEEEEecceEEecCCHHHHHHHHHhcccCC
Q 017030 243 TANDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAHP 290 (378)
Q Consensus 243 ~~~~~~~~~l~~l~~~~~i~~~~~~~~~~~i~t~~~~~~a~~~~l~~~ 290 (378)
...++..+.++.+++++++.++.++++|.||+|++||.++++.+++..
T Consensus 205 ~~~~~~~~~i~~~~~~~~v~~~~~~~~~~dI~t~~d~~~a~~~~~~~~ 252 (259)
T 1tzf_A 205 DATTWEQEPLMTLAQQGELMAFEHPGFWQPMDTLRDKVYLEGLWEKGK 252 (259)
T ss_dssp TTCCTTTHHHHHHHHTTCEEEEEECSCEEECCSHHHHHHHHHHHHTTC
T ss_pred cccccHHHHHHHHHHcCCEEEEEeCcEEEeCCCHHHHHHHHHHHhcCC
Confidence 122344667888777779999999999999999999999999987643
No 12
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=100.00 E-value=2e-34 Score=264.54 Aligned_cols=248 Identities=21% Similarity=0.273 Sum_probs=171.9
Q ss_pred ccceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccC-----C
Q 017030 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNY-----G 80 (378)
Q Consensus 6 ~~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~-----~ 80 (378)
...|+|||||||.|+||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|++++..+++.+++...+.+ .
T Consensus 12 ~~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~ 90 (297)
T 2ux8_A 12 KPLRKAVFPVAGLGTRFLPATKAMPKEMLPVVDR-PLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIAYELEATMAA 90 (297)
T ss_dssp CCCCEEEEEECCCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHTSCCHHHHHHHHT
T ss_pred cCccEEEEECCCCccccCccccCCCceeeeECCe-EHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHhhhhhhhhhhhh
Confidence 3558999999999999999999999999999999 999999999999999999999998888898887532100 0
Q ss_pred CC---------cccCCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEe---cCHHHH
Q 017030 81 SG---------VTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYR---MDYMDF 148 (378)
Q Consensus 81 ~~---------~~~~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~---~d~~~~ 148 (378)
.+ ..++.. +.++. +. .+.||+++++.++.+++ .++|++++||++++ .++.++
T Consensus 91 ~~~~~~~~~~~~~~g~~-i~~~~--~~-------~~~Gt~~al~~a~~~~~------~~~~lv~~~D~~~~~~~~~l~~l 154 (297)
T 2ux8_A 91 RGKSLDVLDGTRLKPGN-IAYVR--QQ-------EPMGLGHAVWCARDIVG------DEPFAVLLPDDFMFGQPGCLKQM 154 (297)
T ss_dssp TTCCGGGGTTSCCSTTS-EEEEE--CC-------SCCCHHHHHHTTHHHHC------SSCEEEECTTEEEESSSCHHHHH
T ss_pred ccchhhhhhhcccCCCc-eEEEe--CC-------CCCChHHHHHHHHHHcC------CCcEEEEeCCeecCCChHHHHHH
Confidence 00 001111 33322 11 13699999999998885 38999999999887 459999
Q ss_pred HHHHHHcCCcEEEEEeecCCCCCCcceEEEECC--CC--CEEEEEecCCccchhcccccchhccccccccccCcceeeee
Q 017030 149 VQNHRQSGADITISCLPMDDSRASDFGLMKINN--EG--RVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMG 224 (378)
Q Consensus 149 l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d~--~~--~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 224 (378)
++.|.+.++ .++++.+.+...+..||++..++ ++ +|..|.|||..... .++++++|
T Consensus 155 ~~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~~~~~~~~~~v~~~~ekp~~~~~-------------------~~~~~~~G 214 (297)
T 2ux8_A 155 VDAYNKVGG-NLICAEEVPDDQTHRYGIITPGTQDGVLTEVKGLVEKPAPGTA-------------------PSNLSVIG 214 (297)
T ss_dssp HHHHHHHCS-EEEEEC-----------CCCCCCBCSSEEEC---------------------------------CCCEEE
T ss_pred HHHHHhcCC-CEEEEEecCcccCCCCCeEEecccCCCceeEEEEEECCCCCCC-------------------CccEEEEE
Confidence 999988776 67777665433356799887653 45 89999999864211 23578999
Q ss_pred EEEEeHHHHHHHHhhhCCC-CCc-hhcccccccccccceEEEEecceEEecCCHHHHHHHHHhcccCCC
Q 017030 225 VYLFKKEILLNLLRWRFPT-AND-FGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAHPP 291 (378)
Q Consensus 225 iy~~~~~~l~~~l~~~~~~-~~~-~~~~~l~~l~~~~~i~~~~~~~~~~~i~t~~~~~~a~~~~l~~~~ 291 (378)
+|+|++++|+ .+++..+. ... ...++++.+++++++.++.++++|.|||||+||.+|++.++...+
T Consensus 215 iyi~~~~~l~-~l~~~~~~~~~~~~l~d~i~~l~~~~~v~~~~~~~~w~dIgt~~dl~~a~~~~~~~~~ 282 (297)
T 2ux8_A 215 RYILQPEVMR-ILENQGKGAGGEIQLTDAMQRMIGDQPFHGVTFQGTRYDCGDKAGFIQANLAVALSRP 282 (297)
T ss_dssp EEEECTHHHH-HHHHTC--------CCTTGGGGTTTSCEEEEECSSEEEETTSHHHHHHHHHHHHHHCT
T ss_pred EEEECHHHHH-HHHhhCCCCCCeeEHHHHHHHHHhcCCEEEEEecceEEeCCCHHHHHHHHHHHHhcCh
Confidence 9999999874 44543322 111 135778888887899999999999999999999999988775543
No 13
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=3e-33 Score=259.46 Aligned_cols=249 Identities=21% Similarity=0.286 Sum_probs=185.3
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCC-----C
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYG-----S 81 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~-----~ 81 (378)
+.|+|||||||.|+||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|++++..+++.+++...+.+. .
T Consensus 11 ~~~~aVIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~iivv~~~~~~~i~~~~~~~~~~~~~l~~~ 89 (323)
T 2pa4_A 11 AVKTVVVPAAGLGTRFLPATKTVPKELLPVVDT-PGIELIAAEAAELGATRLAIITAPNKAGVLAHFERSSELEETLMER 89 (323)
T ss_dssp -CCEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHTTSCCHHHHHHHHHT
T ss_pred cceEEEEECCCCccccCccccCCCceeeeECCE-EHHHHHHHHHHhCCCCEEEEEecCcHHHHHHHHhccchhhhhhhcc
Confidence 458999999999999999999999999999999 9999999999999999999999998888888764311000 0
Q ss_pred C----------cccCCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEe--cCHHHHH
Q 017030 82 G----------VTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYR--MDYMDFV 149 (378)
Q Consensus 82 ~----------~~~~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~--~d~~~~l 149 (378)
+ ..++.. +.++. +.. ..||+++++.++.++.+ ..+.|++++||++++ .++.+++
T Consensus 90 ~~~~~~~~~~~~~~g~~-i~~~~--~~~-------~~Gt~~al~~a~~~l~~----~~d~~lv~~~D~~~~~~~~l~~l~ 155 (323)
T 2pa4_A 90 GKTDQVEIIRRAADLIK-AVPVT--QDK-------PLGLGHAVGLAESVLDD----DEDVVAVMLPDDLVLPTGVMERMA 155 (323)
T ss_dssp TCHHHHHHTTHHHHHCE-EEEEE--CSS-------CCCHHHHHHTTGGGSCS----SCCEEEEECTTEEEESSCHHHHHH
T ss_pred chhhhhhhhhccccCcc-eEEEe--CCc-------cCCcHHHHHHHHHHhcC----CCCeEEEEeCCcccCchHHHHHHH
Confidence 0 001111 22222 211 36999999999888752 013399999999887 4589999
Q ss_pred HHHHHcCCcEEEEEeecCCCCCCcceEEEEC----CCC--CEEEEEecCCccchhcccccchhccccccccccCcceeee
Q 017030 150 QNHRQSGADITISCLPMDDSRASDFGLMKIN----NEG--RVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASM 223 (378)
Q Consensus 150 ~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d----~~~--~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (378)
+.|.+.++ .++++.+.+...+..||++..+ +++ +|..|.|||..... .++++++
T Consensus 156 ~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~d~~~~~~~~~~V~~~~Ekp~~~~~-------------------~~~~~~~ 215 (323)
T 2pa4_A 156 QVRAEFGG-SVLCAVEVSEADVSKYGIFEIEADTKDSDVKKVKGMVEKPAIEDA-------------------PSRLAAT 215 (323)
T ss_dssp HHHHTTCS-EEEEEEECCGGGGGGSEEEEEEECCSSTTEEEEEEEEESCCTTTC-------------------SCSEEEE
T ss_pred HHHHhcCC-cEEEEEEecccccCCccEEEeCCcccCCCceeEEEEEECCCCccc-------------------cccEEEE
Confidence 99987765 5777777654346789999876 454 99999999864221 2367899
Q ss_pred eEEEEeHHHHHHHHhhhCCCC-Cch-hcccccccccc-cceEEEEecceEEecCCHHHHHHHHHhcccCCC
Q 017030 224 GVYLFKKEILLNLLRWRFPTA-NDF-GSEIIPASANE-QFLKAYLFNDYWEDIGTIRSFFEANLALTAHPP 291 (378)
Q Consensus 224 Giy~~~~~~l~~~l~~~~~~~-~~~-~~~~l~~l~~~-~~i~~~~~~~~~~~i~t~~~~~~a~~~~l~~~~ 291 (378)
|+|+|++++|. .+++..+.. ..+ ..++++.++++ .++.++.++++|.|||||+||.+|++.++...+
T Consensus 216 GiY~~~~~~~~-~l~~~~~~~~ge~~l~d~i~~l~~~g~~v~~~~~~g~w~DIgt~~dl~~a~~~~~~~~~ 285 (323)
T 2pa4_A 216 GRYLLDRKIFD-ALRRITPGAGGELQLTDAIDLLIDEGHPVHIVIHQGKRHDLGNPGGYIPACVDFGLSHP 285 (323)
T ss_dssp EEEEEETHHHH-HHHHCCCCGGGCCCHHHHHHHHHHTTCCEEEEECCSEEEECSSHHHHHHHHHHHHHTCT
T ss_pred EEEEECHHHHH-HHHhhCCCCCCeEeHHHHHHHHHHcCCCEEEEEeCCeEEeCCCHHHHHHHHHHHhhcCh
Confidence 99999999885 445432221 111 25677777765 789999999999999999999999988875543
No 14
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=100.00 E-value=1.1e-33 Score=253.38 Aligned_cols=228 Identities=13% Similarity=0.106 Sum_probs=168.0
Q ss_pred EEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhh-cCCcEEEEEeecChhhHHHHHHhhccCCCCcccCCce
Q 017030 11 AVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCIN-SGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGC 89 (378)
Q Consensus 11 avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~-~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 89 (378)
+||||||.||||+|+|.++||+|+||+|+ |||+|+++.+.+ +|+++|+|++++..+ +.+++.+.. ..++...
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv~gk-pli~~~l~~l~~~~gi~~iivv~~~~~~-~~~~~~~~~-----~~~~~~~ 74 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEAHGQ-TLFEHSVNSFAAYFASTPFLFIVRNVYD-TAVFVREKA-----TQLGIKQ 74 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEETTE-EHHHHHHGGGGGGTTTSCEEEEEESSTT-HHHHHHHHH-----HHHTCSS
T ss_pred EEEEcCCCCcccccCCCCCCccccEECCe-EHHHHHHHHHhccCCCceEEEEECchhh-hHHHHHHHH-----HHcCCCC
Confidence 79999999999999999999999999999 999999999999 799999999998766 555655432 1121111
Q ss_pred --EEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEE-ecCHHHHHHHHHHcCCcEEEEEeec
Q 017030 90 --VEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLY-RMDYMDFVQNHRQSGADITISCLPM 166 (378)
Q Consensus 90 --i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~-~~d~~~~l~~h~~~~~~~ti~~~~~ 166 (378)
+.++ +. .+.||++|++.+++++.+.....+++|+|++||+++ +.++.++ .+++++++++.+.
T Consensus 75 ~~~~~~---~~-------~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~ 139 (255)
T 4evw_A 75 FYIAEL---HT-------ETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQG 139 (255)
T ss_dssp EEEEEE---SS-------CCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GGSSSEEEEEEEC
T ss_pred ceEEEe---CC-------CCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hhcCCcEEEEEec
Confidence 2222 21 136999999999999820000014789999999988 4455442 3567789999888
Q ss_pred CCCCCCcceEEEECCCC--CEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHH-HHHHHHhh----
Q 017030 167 DDSRASDFGLMKINNEG--RVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKE-ILLNLLRW---- 239 (378)
Q Consensus 167 ~~~~~~~~g~v~~d~~~--~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~-~l~~~l~~---- 239 (378)
++ + .||++..|++| +|+++.||+.. ++++++|+|+|++. .|.+.+.+
T Consensus 140 ~~--p-~yG~v~~d~~g~~~V~~i~EK~~~-----------------------s~~~~~GiY~f~~~~~~~~~l~~~i~~ 193 (255)
T 4evw_A 140 GG--D-NWSFAKPEHAGSTKVIQTAEKNPI-----------------------SDLCSTGLYHFNRKEDYLEAYREYVAR 193 (255)
T ss_dssp CS--S-CSCEEEESSTTCCBEEEEESSSCS-----------------------SSEEEEEEEEESCHHHHHHHHHHHHTS
T ss_pred CC--C-ceeEEEECCCCCeEEEEEEeccCc-----------------------cCcEEEeEEEECcHHHHHHHHHHHHhc
Confidence 65 3 89999999888 99999999542 35789999999985 34333322
Q ss_pred hCC---CCCchhcccccccccc-cceEEEEec-ceEEecCCHHHHHHHHHhc
Q 017030 240 RFP---TANDFGSEIIPASANE-QFLKAYLFN-DYWEDIGTIRSFFEANLAL 286 (378)
Q Consensus 240 ~~~---~~~~~~~~~l~~l~~~-~~i~~~~~~-~~~~~i~t~~~~~~a~~~~ 286 (378)
..+ ....+..++++.++++ .++.++.++ ++|.|+|||++|.++...-
T Consensus 194 ~~~~~~~gE~~ltd~i~~li~~g~~v~~~~~~~~~w~digt~~~l~~~~~~~ 245 (255)
T 4evw_A 194 PSQEWERGELYIAPLYNELIQKGLNIHYHLIARHEVIFCGVPDEYTDFLRQP 245 (255)
T ss_dssp CGGGCSCSCCCSTTHHHHHHHTTCCEEEEECCGGGCEECCSHHHHHHHHHC-
T ss_pred ccccccCCeEehHHHHHHHHHCCCEEEEEEeccccEEECCCHHHHHHHHhcC
Confidence 111 1222345677777765 469999885 9999999999999997643
No 15
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=100.00 E-value=8.8e-33 Score=252.42 Aligned_cols=233 Identities=23% Similarity=0.396 Sum_probs=183.0
Q ss_pred ceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEe-ecChhhHHHHHHhhccCCCCcccC
Q 017030 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILT-QYNSASLNRHLARAYNYGSGVTFG 86 (378)
Q Consensus 8 ~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~-~~~~~~i~~~l~~~~~~~~~~~~~ 86 (378)
+|+|||||||.||||+|+|...||+|+||+|+ |||+|+++.+..+|+++|+|++ +++.+.+.+++.+ +.+|+
T Consensus 2 ~~~aIILAgG~gtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~------g~~~g 74 (293)
T 1fxo_A 2 KRKGIILAGGSGTRLHPATLAISKQLLPVYDK-PMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGD------GSNWG 74 (293)
T ss_dssp CEEEEEECCCCCTTTTTHHHHSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT------SGGGT
T ss_pred CceEEEECCCCCCcCccccCCCCceeCeECCE-eHHHHHHHHHHHCCCCEEEEEeccccHHHHHHHHhc------ccccC
Confidence 58999999999999999999999999999999 9999999999999999999887 4566778777643 33454
Q ss_pred CceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEE-ecCHHHHHHHHHHcCCcEEEEEee
Q 017030 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLY-RMDYMDFVQNHRQSGADITISCLP 165 (378)
Q Consensus 87 ~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~-~~d~~~~l~~h~~~~~~~ti~~~~ 165 (378)
.. +.+. .+.. +.|++++++.+.+++. .++++++.||.++ ..++.++++.|.+++.+++++..+
T Consensus 75 ~~-i~~~--~~~~-------~~G~~~al~~a~~~i~------~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~ 138 (293)
T 1fxo_A 75 LD-LQYA--VQPS-------PDGLAQAFLIGESFIG------NDLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYH 138 (293)
T ss_dssp CE-EEEE--ECSS-------CCCGGGHHHHTHHHHT------TSEEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEE
T ss_pred ce-EEEe--eCCC-------CCCHHHHHHHHHHHhC------CCCEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEE
Confidence 33 2222 1221 3699999999998886 3789999999854 567999999998777788888877
Q ss_pred cCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCC-C
Q 017030 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT-A 244 (378)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~-~ 244 (378)
+.+ +..||++..|++|+|.++.|||..+. ++++++|+|+|++++++.+ +...+. .
T Consensus 139 v~d--p~~~g~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~~~~~~l~~~-~~~~~~~~ 194 (293)
T 1fxo_A 139 VLD--PERYGVVEFDQGGKAISLEEKPLEPK---------------------SNYAVTGLYFYDQQVVDIA-RDLKPSPR 194 (293)
T ss_dssp CSC--GGGSEEEEECTTSCEEEEEESCSSCS---------------------SSEEEEEEEEECTTHHHHH-HHCCCCTT
T ss_pred CCC--cccCcEEEECCCCcEEEEEECCCCCC---------------------CCeEEEEEEEEcHHHHHHH-HhcCcccC
Confidence 765 56899999998999999999985332 3578999999999998544 433222 1
Q ss_pred Cch-hcccccccccccceEEEEec-ce-EEecCCHHHHHHHHHhcc
Q 017030 245 NDF-GSEIIPASANEQFLKAYLFN-DY-WEDIGTIRSFFEANLALT 287 (378)
Q Consensus 245 ~~~-~~~~l~~l~~~~~i~~~~~~-~~-~~~i~t~~~~~~a~~~~l 287 (378)
..+ ..++++.+++.+++.++... +| |.|+|||+||.+|+..+.
T Consensus 195 ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 240 (293)
T 1fxo_A 195 GELEITDVNRAYLERGQLSVEIMGRGYAWLDTGTHDSLLEAGQFIA 240 (293)
T ss_dssp SSCCHHHHHHHHHHTTCEEEEECCTTSEEEECCSHHHHHHHHHHHH
T ss_pred CceeHHHHHHHHHhcCCeEEEEeCCCCEEEcCCCHHHHHHHHHHHH
Confidence 112 24666767777788887775 75 999999999999998764
No 16
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=100.00 E-value=1.8e-32 Score=250.39 Aligned_cols=233 Identities=24% Similarity=0.394 Sum_probs=182.3
Q ss_pred ceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEee-cChhhHHHHHHhhccCCCCcccC
Q 017030 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQ-YNSASLNRHLARAYNYGSGVTFG 86 (378)
Q Consensus 8 ~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~-~~~~~i~~~l~~~~~~~~~~~~~ 86 (378)
.|+|||||||.||||+|+|...||+|+||+|+ |||+|+++.+..+|+++|+|+++ ++.+.+.+++.+ +.+|+
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~Iivv~~~~~~~~i~~~l~~------g~~~g 75 (295)
T 1lvw_A 3 HMKGIVLAGGSGTRLYPITRAVSKQLLPIYDK-PMIYYPLSVLMLAGIRDILIISTPRDLPLYRDLLGD------GSQFG 75 (295)
T ss_dssp SCEEEEECCCCCSTTTTTTTSSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT------SGGGT
T ss_pred ceEEEEECCCCCCccccccCCCCceecEECCe-eHHHHHHHHHHHCCCCeEEEEeccchHHHHHHHhhh------ccccC
Confidence 48999999999999999999999999999999 99999999999999999999885 666778777643 33454
Q ss_pred CceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeE-EecCHHHHHHHHHHcCCcEEEEEee
Q 017030 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHL-YRMDYMDFVQNHRQSGADITISCLP 165 (378)
Q Consensus 87 ~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~-~~~d~~~~l~~h~~~~~~~ti~~~~ 165 (378)
.. +.++. +.. +.|++++++.+.+++. .++++++.||.+ .+.++.++++.|.+.+.+++++..+
T Consensus 76 ~~-i~~~~--~~~-------~~G~~~al~~a~~~i~------~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~ 139 (295)
T 1lvw_A 76 VR-FSYRV--QEE-------PRGIADAFIVGKDFIG------DSKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYY 139 (295)
T ss_dssp SE-EEEEE--CSS-------CCCGGGHHHHTHHHHT------TSCEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEE
T ss_pred ce-EEEee--CCC-------CCChHHHHHHHHHHhC------CCcEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEE
Confidence 33 22221 221 3599999999999886 378888889984 4667999999998777788888887
Q ss_pred cCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCC-C
Q 017030 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT-A 244 (378)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~-~ 244 (378)
+.+ +..||++..|++|+|.++.|||..+. ++++++|+|+|++++++.+ ....+. .
T Consensus 140 v~d--p~~~g~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~f~~~~l~~~-~~~~~~~~ 195 (295)
T 1lvw_A 140 VRD--PRPFGVVEFDSEGRVISIEEKPSRPK---------------------SNYVVPGLYFYDNQVVEIA-RRIEPSDR 195 (295)
T ss_dssp CSC--CTTSEEEEECTTSBEEEEEESCSSCS---------------------CSEECCSEEEECTTHHHHH-HHCCCCTT
T ss_pred CCC--cccCCEEEECCCCcEEEEEECCCCCC---------------------CCEEEEEeEEEcHHHHHHH-HhcCCccc
Confidence 766 56799999998999999999985432 3578999999999998543 433222 1
Q ss_pred Cch-hcccccccccccceEEEEec-ce-EEecCCHHHHHHHHHhcc
Q 017030 245 NDF-GSEIIPASANEQFLKAYLFN-DY-WEDIGTIRSFFEANLALT 287 (378)
Q Consensus 245 ~~~-~~~~l~~l~~~~~i~~~~~~-~~-~~~i~t~~~~~~a~~~~l 287 (378)
..+ ..++++.+++.+++.++... ++ |.|++||+||.+|+..+.
T Consensus 196 ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (295)
T 1lvw_A 196 GELEITSVNEEYLRMGKLRVELMGRGMAWLDTGTHDGLLEASSFIE 241 (295)
T ss_dssp SCCCHHHHHHHHHHTTCEEEEEECTTCEECCCSSHHHHHHHHHHHH
T ss_pred CceeHHHHHHHHHHcCCcEEEEeCCCCeEEeCCCHHHHHHHHHHHH
Confidence 111 24566666767777777775 75 999999999999998764
No 17
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=100.00 E-value=7.8e-34 Score=260.87 Aligned_cols=258 Identities=12% Similarity=0.131 Sum_probs=185.4
Q ss_pred ccceeEEEEcCCCCcccccccccCcccceee--cCeeeeeeeehhhhhhcCCcEEEEEeecCh-hhHHHHHHhhccCCCC
Q 017030 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPI--GGAYRLIDVPMSNCINSGINKVYILTQYNS-ASLNRHLARAYNYGSG 82 (378)
Q Consensus 6 ~~~~~avIla~G~g~rl~plt~~~pK~llpi--~g~~pli~~~l~~l~~~gi~~I~iv~~~~~-~~i~~~l~~~~~~~~~ 82 (378)
|++|+|||||||.|+||+| ||+|+|+ +|+ |||+|+++++.++|+++|+|++++.. +.+.+++.+.+.
T Consensus 3 ~m~~~~vIlAaG~g~R~~~-----~K~l~~ig~~g~-pli~~~l~~~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~---- 72 (303)
T 3pnn_A 3 AMKPTLFVLAAGMGSRYGS-----LKQLDGIGPGGD-TIMDYSVYDAIRAGFGRLVFVIRHSFEKEFREKILTKYE---- 72 (303)
T ss_dssp CCCCEEEEECTTCBCTTSS-----BCCCCCCSTTSC-CHHHHHHHHHHHHTCCEEEEEECGGGHHHHHHHTHHHHT----
T ss_pred CCceEEEEECCCCcccCCC-----CceEeEcCCCCe-eHHHHHHHHHHHCCCCeEEEEcCchHHHHHHHHHHHHhc----
Confidence 5678999999999999997 7999999 599 99999999999999999999999884 789998875432
Q ss_pred cccCCceEEEecccc-C-----CCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEecC-HHHHHHHHHH-
Q 017030 83 VTFGDGCVEVLAATQ-T-----PGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQ- 154 (378)
Q Consensus 83 ~~~~~~~i~i~~~~~-~-----~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~d-~~~~l~~h~~- 154 (378)
|+.. +.++.... . .....+..++||+++++.++++++ ++|+|++||.+++.+ +.+++++|.+
T Consensus 73 --~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i~-------~~~lV~~gD~l~~~~~~~~l~~~~~~~ 142 (303)
T 3pnn_A 73 --GRIP-VELVFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAIR-------EPFAVINADDFYGRNGFEVLARKLMTL 142 (303)
T ss_dssp --TTSC-EEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTCC-------SCEEEEESSCBCCHHHHHHHHHHHHTT
T ss_pred --cCCc-EEEEecccccccccccccccccccCCcHHHHHHHHHhcC-------CCEEEEECCeecCHHHHHHHHHHHHHh
Confidence 2111 22221110 0 000001235799999999988773 799999999999887 8999999986
Q ss_pred --cCCcEEEEEeecCCCCCCcc-----eEEEECCCCCEEEEEecCCccchhc-ccccchhcccccccc-ccCcceeeeeE
Q 017030 155 --SGADITISCLPMDDSRASDF-----GLMKINNEGRVLSFSEKPKGKDLKA-MAVDTTVLGLSKQEA-EEKPYIASMGV 225 (378)
Q Consensus 155 --~~~~~ti~~~~~~~~~~~~~-----g~v~~d~~~~v~~~~ek~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~Gi 225 (378)
+++++|+++.+.+++ .+.| |.+..|++|+|+++.|||....... .... .....+. ...++++++|+
T Consensus 143 ~~~~~~~~v~~~~~~~~-~~~~g~~~~G~v~~d~~g~v~~i~Ekp~~~~~~~~~~~~----~~~g~~~~~~~~~~i~~Gi 217 (303)
T 3pnn_A 143 EGKQGEYCMVGYRVGNT-LSESGGVSRGVCQVDEKHLLTGVVERTGIERTDGTISFR----DETGKICTLAEDAPVSMNM 217 (303)
T ss_dssp TTCSSEEEEEEEEGGGS-CBTTBCEEEEEEEECTTSBEEEEEEEEEEEEETTEEEEE----CTTSCEEEECTTCEEEEEE
T ss_pred ccccCceEEEEEECCCc-cCccCceeeeeEeeCCCCcEEEEEECCCCcccccccccc----ccccccccCCCCCEEEEEE
Confidence 578899999887652 1445 6888988899999999986431000 0000 0000000 01246899999
Q ss_pred EEEeHHHHHHHHh-------hhCCC--CCchhccccccccccc--ceEEEEecceEEecCCHHHHHHHHHhccc
Q 017030 226 YLFKKEILLNLLR-------WRFPT--ANDFGSEIIPASANEQ--FLKAYLFNDYWEDIGTIRSFFEANLALTA 288 (378)
Q Consensus 226 y~~~~~~l~~~l~-------~~~~~--~~~~~~~~l~~l~~~~--~i~~~~~~~~~~~i~t~~~~~~a~~~~l~ 288 (378)
|+|++++|..+.+ +..+. ...+..++++.+++++ ++.+|.++++|.|||||+||.+|++.+.+
T Consensus 218 Y~f~~~~~~~l~~~~~~~l~~~~~~~~~e~~l~d~i~~li~~g~~~v~~~~~~g~w~dIgt~~dl~~a~~~l~~ 291 (303)
T 3pnn_A 218 WGFTPDYFDYSEELFINFLNAHGQEPKSEFFIPFVVNDLIRSGRASVEVLDTTARWFGVTYSDDRPGVVAKLRE 291 (303)
T ss_dssp EEECTHHHHHHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHTSCEEEEEECSCCCBCCSSGGGHHHHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHHHHhcCCCcCCcEEhHHHHHHHHHcCCCcEEEEEeCCceECCCCHHHHHHHHHHHHH
Confidence 9999999864422 01111 1223356777777776 79999999999999999999999987754
No 18
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=100.00 E-value=1e-32 Score=252.15 Aligned_cols=233 Identities=24% Similarity=0.385 Sum_probs=182.0
Q ss_pred ceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEee-cChhhHHHHHHhhccCCCCcccC
Q 017030 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQ-YNSASLNRHLARAYNYGSGVTFG 86 (378)
Q Consensus 8 ~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~-~~~~~i~~~l~~~~~~~~~~~~~ 86 (378)
.|+|||||||.||||+|+|...||+|+||+|+ |||+|+++.+..+|+++|+|+++ ++.+.+++++.+ +.+|+
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~------g~~~g 75 (296)
T 1mc3_A 3 HMKGIILAGGSGTRLHPITRGVSKQLLPIYDK-PMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLGD------GSEFG 75 (296)
T ss_dssp CCEEEEECCCCCGGGHHHHTTSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT------SGGGT
T ss_pred ccEEEEECCCCCCcCCcccCCCCceeeEECCe-eHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHhc------ccccC
Confidence 48999999999999999999999999999999 99999999999999999999885 666778777643 33444
Q ss_pred CceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEE-ecCHHHHHHHHHHcCCcEEEEEee
Q 017030 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLY-RMDYMDFVQNHRQSGADITISCLP 165 (378)
Q Consensus 87 ~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~-~~d~~~~l~~h~~~~~~~ti~~~~ 165 (378)
.. +.++. +.. +.|++++++.+.++++ .++++++.||.++ ..++.++++.|.+.+.+++++..+
T Consensus 76 ~~-i~~~~--~~~-------~~G~~~al~~a~~~i~------~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~ 139 (296)
T 1mc3_A 76 IQ-LEYAE--QPS-------PDGLAQAFIIGETFLN------GEPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQ 139 (296)
T ss_dssp CE-EEEEE--CSS-------CCCSTHHHHHTHHHHT------TSCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEE
T ss_pred ce-EEEec--cCC-------CCCHHHHHHHHHHHhC------CCCEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEE
Confidence 33 22221 221 3699999999999886 3678888899854 567999999997777788888887
Q ss_pred cCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCC-C
Q 017030 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT-A 244 (378)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~-~ 244 (378)
+.+ +..||++..|++|+|.+|.|||..+. ++++++|+|+|++++++. ++...+. .
T Consensus 140 v~d--p~~yg~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~~~~~~l~~-~~~~~~~~~ 195 (296)
T 1mc3_A 140 VMD--PERFGVVEFDDNFRAISLEEKPKQPK---------------------SNWAVTGLYFYDSKVVEY-AKQVKPSER 195 (296)
T ss_dssp CSC--CSSSBBCEEETTEEEEECCBSCSSCS---------------------CSEEEEEEEECCTHHHHH-HHSCCCCSS
T ss_pred CCC--cccCCEEEECCCCcEEEEEECCCCCC---------------------CCEEEEEEEEEcHHHHHH-HHhcCcccc
Confidence 766 56899999988899999999986432 357899999999999854 4443222 1
Q ss_pred Cch-hcccccccccccceEEEEec-ce-EEecCCHHHHHHHHHhcc
Q 017030 245 NDF-GSEIIPASANEQFLKAYLFN-DY-WEDIGTIRSFFEANLALT 287 (378)
Q Consensus 245 ~~~-~~~~l~~l~~~~~i~~~~~~-~~-~~~i~t~~~~~~a~~~~l 287 (378)
.++ ..++++.+++.+++.++... ++ |.|+||++||.+|+..+.
T Consensus 196 ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (296)
T 1mc3_A 196 GELEITSINQMYLEAGNLTVELLGRGFAWLDTGTHDSLIEASTFVQ 241 (296)
T ss_dssp SSCCHHHHHHHHHHTTCEEEEECCTTCEEEECCSHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHhcCCeEEEEeCCCCEEEeCCCHHHHHHHHHHHH
Confidence 111 24566666767778888775 75 999999999999998765
No 19
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.97 E-value=8.4e-32 Score=248.10 Aligned_cols=242 Identities=18% Similarity=0.325 Sum_probs=154.2
Q ss_pred cceeEEEEcCCCCcccccccc-cCcccceee-cCeeeeeeeehhhhhhcCCcEEEEEeecCh-hhHHHHHHhhccCCCCc
Q 017030 7 RTVAAVILGGGAGTRLYPLTK-QRAKPAVPI-GGAYRLIDVPMSNCINSGINKVYILTQYNS-ASLNRHLARAYNYGSGV 83 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~-~~pK~llpi-~g~~pli~~~l~~l~~~gi~~I~iv~~~~~-~~i~~~l~~~~~~~~~~ 83 (378)
++|+|||||||.|+||+|+|. ..||+|+|| +|+ |||+|+++++.++ +++|+|++++.. +.+.+++...
T Consensus 3 ~~~~avIlAgG~gtRl~plt~~~~pK~ll~i~gg~-pli~~~l~~l~~~-~~~i~vv~~~~~~~~i~~~~~~~------- 73 (308)
T 2qh5_A 3 LKIKNILLSGGSGKRLWPLSRSLYPKQFLKLFDHK-SLFELSFKRNASL-VDETLIVCNEKHYFLALEEIKNE------- 73 (308)
T ss_dssp CCEEEEEECC-------------CCGGGCTTBTTB-CHHHHHHHHHHTT-CSEEEEEEEGGGHHHHHHHTTTT-------
T ss_pred CccEEEEEcCCCCccCCccCCCCCCCEEEECCCCC-CHHHHHHHHHHcc-CCCEEEEEChhHHHHHHHHHHHh-------
Confidence 458999999999999999996 799999999 599 9999999999999 999999998874 5677776431
Q ss_pred ccCCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEE-ecC-HHHHHHH---HHHcCCc
Q 017030 84 TFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLY-RMD-YMDFVQN---HRQSGAD 158 (378)
Q Consensus 84 ~~~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~-~~d-~~~~l~~---h~~~~~~ 158 (378)
|+...+.++.... +.||+++++.+..+++. ++.|++++||+++ +.+ +.++++. |.++++.
T Consensus 74 -~~~~~~~~i~~~~---------~~gt~~al~~a~~~l~~-----~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (308)
T 2qh5_A 74 -IKNKSVGFLLESL---------SKNTANAIALSALMSDK-----EDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFL 138 (308)
T ss_dssp -CSSCEEEEEEESS---------CCCHHHHHHHHHHTSCT-----TSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred -hCCCccEEEeCCC---------CCChHHHHHHHHHHhCC-----CCeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCE
Confidence 2221122322111 36999999999888742 3569999999987 677 8999987 7777888
Q ss_pred EEEEEeecCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHh
Q 017030 159 ITISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLR 238 (378)
Q Consensus 159 ~ti~~~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~ 238 (378)
+|+.+.+..+ +..||++..+++++|..|.|||.....+.+.. ..++++++|+|+|++++|.+.++
T Consensus 139 ~t~~~~~~~~--~~~~g~i~~d~~~~V~~~~Ekp~~~~~~~~~~-------------~g~~~~n~Giy~~~~~~ll~~l~ 203 (308)
T 2qh5_A 139 VTFGVSIDKP--NTEFGYIESPNGLDVKRFIEKPSLDKAIEFQK-------------SGGFYFNSGMFVFQAGVFLDELK 203 (308)
T ss_dssp EEEEEECSSC--CTTSEEEECSSSSBCSEEEESCCHHHHHHHHH-------------HCCEEEEEEEEEEEHHHHHHHHH
T ss_pred EEEEEecCCC--CCCceEEEECCCCEEEEEEECCChHHHHHHhh-------------cCCeEEEeEEEEEEHHHHHHHHH
Confidence 8988887654 56799998877789999999987543211100 01368999999999988645544
Q ss_pred hhCCCC------------------Cchh---ccccc--------c-ccc-ccceEEEEecceEEecCCHHHHHHHHHhcc
Q 017030 239 WRFPTA------------------NDFG---SEIIP--------A-SAN-EQFLKAYLFNDYWEDIGTIRSFFEANLALT 287 (378)
Q Consensus 239 ~~~~~~------------------~~~~---~~~l~--------~-l~~-~~~i~~~~~~~~~~~i~t~~~~~~a~~~~l 287 (378)
+..+.. .++. .++++ . +++ +.++.+++++++|.|||||++|.+++....
T Consensus 204 ~~~p~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~sid~~lle~~~~v~~~~~~~~w~digt~~~l~~~~~~~~ 283 (308)
T 2qh5_A 204 KHAPTILKGCERAFESLENAYFFEKKIARLSEKSMQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAANEP 283 (308)
T ss_dssp HHCHHHHHHHHHHGGGCEEECCSSSCEEEECHHHHHTSCCCCHHHHTTTTCSCEEEEECCSCCBC---------------
T ss_pred HhChHHHHHHHHHhhccccccccchhhhhhhHHHHhhCcccceeHHHhcCCCcEEEEECCCceeCCCCHHHHHHHhhcCc
Confidence 322110 1111 13332 2 444 468999999999999999999999987553
No 20
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.97 E-value=2.6e-30 Score=240.15 Aligned_cols=233 Identities=20% Similarity=0.311 Sum_probs=169.4
Q ss_pred eeEEEEcCCCCccccccc-ccCcccceeecC-eeeeeeeehhhhhhc-CCcEEEEEeecCh-hhHHHHHHhhccCCCCcc
Q 017030 9 VAAVILGGGAGTRLYPLT-KQRAKPAVPIGG-AYRLIDVPMSNCINS-GINKVYILTQYNS-ASLNRHLARAYNYGSGVT 84 (378)
Q Consensus 9 ~~avIla~G~g~rl~plt-~~~pK~llpi~g-~~pli~~~l~~l~~~-gi~~I~iv~~~~~-~~i~~~l~~~~~~~~~~~ 84 (378)
|++||||||.||||+|+| ..+||+|+|++| + |||+|+++++..+ |+++|+|++++.. ..+.+++... ..
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~-pli~~~l~~l~~~~~~~~iivvt~~~~~~~i~~~l~~~------~~ 74 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKLFGNK-SLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPEL------PD 74 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCCBTTB-CHHHHHHHHHHTTCCGGGEEEEEEGGGHHHHHHHCTTS------CG
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEECCCCC-cHHHHHHHHHhccCCCCcEEEEcChHHHHHHHHHhhcc------cc
Confidence 789999999999999999 779999999999 8 9999999999996 8999999998864 4566665431 11
Q ss_pred cCCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEec--CHH----HHHHHHHHcCCc
Q 017030 85 FGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRM--DYM----DFVQNHRQSGAD 158 (378)
Q Consensus 85 ~~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~--d~~----~~l~~h~~~~~~ 158 (378)
+ . + ++... +.||++++..+...+.. ++.+++++||+++.. +|. .++++|.+.++.
T Consensus 75 ~--~-i-i~e~~----------~~gta~ai~~a~~~~~~-----~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~ 135 (336)
T 2x65_A 75 E--N-I-IAEPM----------KKNTAPACFIGTKLADD-----DEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGL 135 (336)
T ss_dssp G--G-E-EEESS----------CCCHHHHHHHHHTTSCT-----TCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSE
T ss_pred c--e-E-EeCCC----------CCCcHHHHHHHHHhhCC-----CCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCe
Confidence 1 1 2 22211 25999999988765532 467999999997743 344 445557666778
Q ss_pred EEEEEeecCCCCCCcceEEEECCC-----CCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHH
Q 017030 159 ITISCLPMDDSRASDFGLMKINNE-----GRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEIL 233 (378)
Q Consensus 159 ~ti~~~~~~~~~~~~~g~v~~d~~-----~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l 233 (378)
+|+.+.+..+ ...||++..+++ ++|..|.|||.....+.+..+ ..+++++|+|+|++++|
T Consensus 136 vt~~i~p~~~--~~~yG~I~~~~~~~~~~~~V~~f~EKp~~~~a~~~~~~-------------g~y~~n~Giy~~~~~~l 200 (336)
T 2x65_A 136 FTFGIVPTRP--ETGYGYIEIGEELEEGVHKVAQFREKPDLETAKKFVES-------------GRFLWNSGMFLWKAREF 200 (336)
T ss_dssp EEEEECCCSC--CSSSEEEEEEEEEETTEEEEEEEEESCCHHHHHHHHHH-------------TCEEEEEEEEEEEHHHH
T ss_pred EEEEeecccC--CCCceEEEECCccCCCccEEEEEEECCChHHHHHHHhc-------------CCeEEEeeeEEEEHHHH
Confidence 8888777654 467999988654 789999999986543211111 23689999999999987
Q ss_pred HHHHhhhCCCC----------C-chhcccccc---------ccc-ccceEEEEecceEEecCCHHHHHHH
Q 017030 234 LNLLRWRFPTA----------N-DFGSEIIPA---------SAN-EQFLKAYLFNDYWEDIGTIRSFFEA 282 (378)
Q Consensus 234 ~~~l~~~~~~~----------~-~~~~~~l~~---------l~~-~~~i~~~~~~~~~~~i~t~~~~~~a 282 (378)
.+.+++..+.. . +|..+.++. +++ ..++++++++++|.|||||++|.++
T Consensus 201 l~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DiGt~~~l~~~ 270 (336)
T 2x65_A 201 IEEVKVCEPSIYENLKDVDPRNFEELKKAYEKVPSISVDYAVMEKSKKVRVVKADFEWSDLGNWSSVREI 270 (336)
T ss_dssp HHHHHHHCHHHHHHHTTCCTTCHHHHHHHHHHSCCCCHHHHTTTTCSCEEEEECSSCCBCCCSHHHHHHH
T ss_pred HHHHHHHCHHHHHHHHHhhhhhhhHHHHHHHhCccccHHHHHhcCCCeEEEEEecCCCcCCCCHHHHHhh
Confidence 54544432210 0 222344443 333 4689999999999999999999999
No 21
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.96 E-value=1.2e-29 Score=227.16 Aligned_cols=221 Identities=15% Similarity=0.230 Sum_probs=159.5
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccC
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~ 86 (378)
++|.|||||||.|+||+|+|..+||+|+|++|+ |||+|+++++.++|+++|+|++++..+++.+... . |+
T Consensus 24 ~~~~aiIlAaG~gtRl~plt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~-~--------~~ 93 (254)
T 1jyk_A 24 IRVKAIILAAGLGTRLRPLTENTPKALVQVNQK-PLIEYQIEFLKEKGINDIIIIVGYLKEQFDYLKE-K--------YG 93 (254)
T ss_dssp CCCEEEEEECSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCCEEEEECTTGGGGTHHHH-H--------HC
T ss_pred cCceEEEECCCCcccCCcccCCCCCEEeeECCE-EHHHHHHHHHHHCCCCeEEEEeCCcHHHHHHHHH-h--------CC
Confidence 368999999999999999999999999999999 9999999999999999999999987777754432 2 22
Q ss_pred CceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEecC-HHHHHHHHHHcCCcEEEEEee
Q 017030 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGADITISCLP 165 (378)
Q Consensus 87 ~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~d-~~~~l~~h~~~~~~~ti~~~~ 165 (378)
+.++...+.. ..|++++++.+++.+ +++++++||+++..+ +..++ ++++.+|+ .
T Consensus 94 ---~~iv~~~~~~-------~~g~~~al~~a~~~~--------~~~lv~~~D~~~~~~~~~~~~----~~~~~~t~---~ 148 (254)
T 1jyk_A 94 ---VRLVFNDKYA-------DYNNFYSLYLVKEEL--------ANSYVIDADNYLFKNMFRNDL----TRSTYFSV---Y 148 (254)
T ss_dssp ---CEEEECTTTT-------TSCTHHHHHTTGGGC--------TTEEEEETTEEESSCCCCSCC----CSEEEEEC---E
T ss_pred ---cEEEECCCcc-------CCCcHHHHHHHHHHC--------CCEEEEeCCcccCHHHHHHHH----hCCceEEE---E
Confidence 2233322211 258999999887665 248899999987666 33322 23333333 2
Q ss_pred cCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHH---HHHHhhhCC
Q 017030 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEIL---LNLLRWRFP 242 (378)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l---~~~l~~~~~ 242 (378)
..++ ...|+++ .|++|+|+.+.|++.. .++++|+|+|+++.+ .++++....
T Consensus 149 ~~~~-~~~~~v~-~d~~g~v~~~~e~~~~------------------------~~~~~Giy~~~~~~~~~l~~~l~~~~~ 202 (254)
T 1jyk_A 149 REDC-TNEWFLV-YGDDYKVQDIIVDSKA------------------------GRILSGVSFWDAPTAEKIVSFIDKAYV 202 (254)
T ss_dssp ESSC-SSCCEEE-ECTTCBEEEEECCCSS------------------------EEBCCSEEEECHHHHHHHHHHHHHHHT
T ss_pred cccC-CCCeEEE-ECCCCeEEEEEECCCC------------------------CcEEEEEEEEcHHHHHHHHHHHHHHHh
Confidence 2221 2357755 7888999999997531 467999999998743 233333222
Q ss_pred C---CCchhcccccccccccceEEEEec-ceEEecCCHHHHHHHHHhccc
Q 017030 243 T---ANDFGSEIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLALTA 288 (378)
Q Consensus 243 ~---~~~~~~~~l~~l~~~~~i~~~~~~-~~~~~i~t~~~~~~a~~~~l~ 288 (378)
. ...+..++++.+..+.++.++.++ ++|.+|+|++||.+|++.+.+
T Consensus 203 ~~~~~e~~~~d~~~~l~~~~~v~~~~~~~~~~~~Idt~edl~~a~~~l~~ 252 (254)
T 1jyk_A 203 SGEFVDLYWDNMVKDNIKELDVYVEELEGNSIYEIDSVQDYRKLEEILKN 252 (254)
T ss_dssp TTCCTTCCTTHHHHTTGGGCCEEEEECCTTSEEECCSHHHHHHHHHHHC-
T ss_pred cCCccccCHHHHHHHHHhhCCeEEEEecCCeEEEcCCHHHHHHHHHHhhh
Confidence 1 223345566777777889999887 799999999999999987753
No 22
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.96 E-value=1.5e-29 Score=235.11 Aligned_cols=234 Identities=20% Similarity=0.304 Sum_probs=165.1
Q ss_pred ceeEEEEcCCCCccccccc-ccCcccceeecC-eeeeeeeehhhhhhc-CCcEEEEEeecCh-hhHHHHHHhhccCCCCc
Q 017030 8 TVAAVILGGGAGTRLYPLT-KQRAKPAVPIGG-AYRLIDVPMSNCINS-GINKVYILTQYNS-ASLNRHLARAYNYGSGV 83 (378)
Q Consensus 8 ~~~avIla~G~g~rl~plt-~~~pK~llpi~g-~~pli~~~l~~l~~~-gi~~I~iv~~~~~-~~i~~~l~~~~~~~~~~ 83 (378)
+|.+||||||.|+||+|+| ..+||+|+|++| + |||+|+++++..+ |+++|+|++++.. ..+.+++. ..
T Consensus 2 ~m~~VILAgG~GtRl~Pls~~~~pK~ll~l~G~~-pli~~~l~~l~~~~~~~~iiVvt~~~~~~~i~~~l~------~~- 73 (337)
T 2cu2_A 2 KTYALVMAGGRGERLWPLSREDRPKPFLPLFEGK-TLLEATLERLAPLVPPERTLLAVRRDQEAVARPYAD------GI- 73 (337)
T ss_dssp CEEEEEECCCCCGGGTTTCBTTBCGGGCBCGGGC-BHHHHHHHHHTTTSCGGGEEEEEEGGGHHHHGGGCS------SS-
T ss_pred CeEEEEEcCCCcccCCccCCCCCCceEEEcCCCC-hHHHHHHHHHhCcCCCCCEEEEcChHHHHHHHHHhc------cC-
Confidence 4899999999999999999 689999999999 8 9999999999998 8999999998764 33433331 10
Q ss_pred ccCCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEec--CHHHHHHH----HHHcCC
Q 017030 84 TFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRM--DYMDFVQN----HRQSGA 157 (378)
Q Consensus 84 ~~~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~--d~~~~l~~----h~~~~~ 157 (378)
.+ ++... +.||++++..+.. +... ..++.+++++||+++.. .|..+++. |.+ ++
T Consensus 74 -----~~-i~e~~----------~~gta~ai~~a~~-l~~~--~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~ 133 (337)
T 2cu2_A 74 -----RL-LLEPL----------GRDTAGAVLLGVA-EALK--EGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GF 133 (337)
T ss_dssp -----EE-EEESS----------CCHHHHHHHHHHH-HHHH--HTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TC
T ss_pred -----ce-EecCC----------CCCcHHHHHHHHH-Hhcc--CCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CC
Confidence 11 22211 2589999988876 5210 01478999999998753 25554443 433 67
Q ss_pred cEEEEEeecCCCCCCcceEEEECCC----CCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHH
Q 017030 158 DITISCLPMDDSRASDFGLMKINNE----GRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEIL 233 (378)
Q Consensus 158 ~~ti~~~~~~~~~~~~~g~v~~d~~----~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l 233 (378)
.+|+.+.+..+ +..||++..+++ ++|..|.|||.....+.+.. ..+++++|+|+|++++|
T Consensus 134 ~vt~~i~p~~~--~t~yG~I~~~~~~~~~~~V~~f~EKp~~~~a~~~~~--------------~g~~~n~Giy~f~~~~l 197 (337)
T 2cu2_A 134 VVALGLRPTRP--ETEYGYIRLGPREGAWYRGEGFVEKPSYAEALEYIR--------------KGYVWNGGVFAFAPATM 197 (337)
T ss_dssp EEEEEECCSSC--CSSSCEEEEEEEETTEEEEEEEECCCCHHHHHHHHH--------------TTCEEEEEEEEECHHHH
T ss_pred eEEEeeccCCC--CCCceEEEECCcccccCeEEEEEeCCChHHHHHHhh--------------cCCEEEEEEEEEeHHHH
Confidence 78888877654 567999988765 79999999998643322111 11589999999999987
Q ss_pred HHHHhhhCCCCC-ch--------hcccccc---------ccc-ccceEEEEecceEEecCCHHHHHHHHHh
Q 017030 234 LNLLRWRFPTAN-DF--------GSEIIPA---------SAN-EQFLKAYLFNDYWEDIGTIRSFFEANLA 285 (378)
Q Consensus 234 ~~~l~~~~~~~~-~~--------~~~~l~~---------l~~-~~~i~~~~~~~~~~~i~t~~~~~~a~~~ 285 (378)
.+.+++..+... .+ ..+.++. +++ ..++++++++++|.|+|||++|.++...
T Consensus 198 l~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DvGt~~~l~~~~~~ 268 (337)
T 2cu2_A 198 AELFRRHLPSHHEALERLLAGASLEEVYAGLPKISIDYGVMEKAERVRVVLGRFPWDDVGNWRALERVFSQ 268 (337)
T ss_dssp HHHHHHHCHHHHHHHHHHHTTCCHHHHHHTSCCCCHHHHTGGGCSSEEEEEECSCEECCCSTTHHHHHHTS
T ss_pred HHHHHHHCHHHHHHHHHHhcCCcHHHHHhhCccchHHHHHhhCCCcEEEEEeCCcEEcCCCHHHHHHHhhc
Confidence 555554322110 00 0122332 333 4689999999999999999999998543
No 23
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.96 E-value=3.9e-28 Score=217.14 Aligned_cols=237 Identities=18% Similarity=0.242 Sum_probs=169.8
Q ss_pred ceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccCC
Q 017030 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (378)
Q Consensus 8 ~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 87 (378)
++.|||||||.|||| | ||+|+||+|+ |||+|+++.+.++|+++|+|+++ .+.+.+++.+ ++
T Consensus 2 ~~~aiIlA~G~stRl-p-----~K~L~~i~Gk-Pli~~~l~~l~~~~~~~ivVv~~--~~~i~~~~~~---------~g- 62 (252)
T 3oam_A 2 SFTVVIPARYQSTRL-P-----GKPLADIGGK-PMIQWVYEQAMQAGADRVIIATD--DERVEQAVQA---------FG- 62 (252)
T ss_dssp CEEEEEECCCCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH---------TT-
T ss_pred ceEEEEecCcCCCCC-C-----CcceeeECCE-EHHHHHHHHHHhCCCCeEEEECC--HHHHHHHHHH---------cC-
Confidence 588999999999999 3 8999999999 99999999999999999999884 4678777753 12
Q ss_pred ceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EE-ecCHHHHHHHHHHcCCcEEEEEee
Q 017030 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LY-RMDYMDFVQNHRQSGADITISCLP 165 (378)
Q Consensus 88 ~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~-~~d~~~~l~~h~~~~~~~ti~~~~ 165 (378)
+.++...+. .+.||++ +..+...+.. ...+.|++++||. ++ ..++.++++.|.+.++++++++.+
T Consensus 63 --~~v~~~~~~-------~~~Gt~~-~~~~~~~l~~---~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~ 129 (252)
T 3oam_A 63 --GVVCMTSPN-------HQSGTER-LAEVVAKMAI---PADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVE 129 (252)
T ss_dssp --CEEEECCTT-------CCSHHHH-HHHHHHHTTC---CTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEE
T ss_pred --CEEEEcCCC-------CCCcHHH-HHHHHHhcCc---CCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeee
Confidence 122221221 1358888 4555556521 0158999999998 44 455899999998888899999998
Q ss_pred cCCCCCCcc-----eEEEECCCCCEEEEEecCCccchhcccccchhcccccccc--ccCcceeeeeEEEEeHHHHHHHHh
Q 017030 166 MDDSRASDF-----GLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEA--EEKPYIASMGVYLFKKEILLNLLR 238 (378)
Q Consensus 166 ~~~~~~~~~-----g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Giy~~~~~~l~~~l~ 238 (378)
.++ +..| |.|..|++|+++.|.++|-........ .+. ...+++.++|+|+|++++|+.+..
T Consensus 130 v~~--~~~~~~p~~g~vv~d~~g~v~~fsr~~i~~~~~~~~----------~~~~~~~~~~~~n~GiY~~~~~~l~~~~~ 197 (252)
T 3oam_A 130 IED--EAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFA----------KADKAIVQPLLRHIGIYAYRAGFINTYLD 197 (252)
T ss_dssp ECC--HHHHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHH----------SSSCCCCSCEEEEEEEEEEETTHHHHHHH
T ss_pred cCC--HHHhhCCCceEEEECCCCeEEEEeCCCCCCCCCccc----------cccccccccceEEEEEEEcCHHHHHHHHc
Confidence 875 3445 999999999999999998654211000 000 012478999999999999987654
Q ss_pred hhCCCCCchhc--ccccccccccceEEEEec-ceEEecCCHHHHHHHHHhcccC
Q 017030 239 WRFPTANDFGS--EIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLALTAH 289 (378)
Q Consensus 239 ~~~~~~~~~~~--~~l~~l~~~~~i~~~~~~-~~~~~i~t~~~~~~a~~~~l~~ 289 (378)
.. +...+..+ +.+..+-.+.+|.++..+ .+|.+||||+||.+|++.+.++
T Consensus 198 ~~-~~~~e~~E~le~lr~l~~G~~i~~~~~~~~~~~~idt~~dl~~a~~~~~~r 250 (252)
T 3oam_A 198 WQ-PSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAER 250 (252)
T ss_dssp SC-CCHHHHHHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred CC-CCcccccchhHHHHHHHCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhh
Confidence 32 22111111 223333346789998764 4689999999999999887653
No 24
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.94 E-value=2.2e-25 Score=198.79 Aligned_cols=238 Identities=16% Similarity=0.169 Sum_probs=159.0
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccC
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~ 86 (378)
+++.|||||+|.||||. ||+|+||+|| |||+|+++.+.++|+++|+|+++ .+.+.+++.+ ++
T Consensus 8 M~~~aIIlA~G~stRl~------~K~L~~i~Gk-Pli~~~l~~l~~~~i~~VvVvt~--~~~i~~~~~~---------~g 69 (256)
T 3tqd_A 8 MEFRVIIPARFDSTRLP------GKALVDIAGK-PMIQHVYESAIKSGAEEVVIATD--DKRIRQVAED---------FG 69 (256)
T ss_dssp -CCEEEEECCCC---CT------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH---------TT
T ss_pred CCceEEEEcCCCCCCCC------CCCeeeECCc-hHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH---------cC
Confidence 56899999999999994 8999999999 99999999999999999999885 4667777643 12
Q ss_pred CceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEec-CHHHHHHHHHHc-CCcEEEEE
Q 017030 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRM-DYMDFVQNHRQS-GADITISC 163 (378)
Q Consensus 87 ~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~~-d~~~~l~~h~~~-~~~~ti~~ 163 (378)
. .++...+. .+.|+++ +..+...+.. ...+.+++++||. ++.. .+..+++.|.+. ++++++++
T Consensus 70 ~---~v~~~~~~-------~~~Gt~~-i~~a~~~l~~---~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~ 135 (256)
T 3tqd_A 70 A---VVCMTSSD-------HQSGTER-IAEAAVALGF---EDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLC 135 (256)
T ss_dssp C---EEEECCTT-------CCSHHHH-HHHHHHHTTC---CTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEE
T ss_pred C---eEEEeCCC-------CCCcHHH-HHHHHHHhCc---CCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEe
Confidence 1 22221111 1357876 7777777731 0158999999999 4544 489999998774 56777777
Q ss_pred eecCCC----CCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhh
Q 017030 164 LPMDDS----RASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRW 239 (378)
Q Consensus 164 ~~~~~~----~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~ 239 (378)
.+..+. .+..++ |..|++|+++.|.++|.+........+ .......+++.+.|+|.|++++|+.+..
T Consensus 136 ~~v~~~~~~~~p~~vk-vv~d~~g~~l~fsr~pip~~r~~~~~~-------~~~~~~~~~~~~~GiY~y~~~~l~~~~~- 206 (256)
T 3tqd_A 136 TPITEVDELFNPHSTK-VVLNRRNYALYFSHAPIPWGRDTFSDK-------ENLQLNGSHYRHVGIYAYRVGFLEEYLS- 206 (256)
T ss_dssp EECCCHHHHTCTTSCE-EEECTTSBEEEEESSCSSCCTTTTTCG-------GGCCCSSCCEEEEEEEEEEHHHHHHHHH-
T ss_pred eEcCCHHHhhCCCccE-EEECCCCEEeEEecCCCCCCCcccccc-------cccccCCcceEEEEEEEcCHHHHHHHHh-
Confidence 776431 123333 568889999999999864321000000 0000012468899999999999976643
Q ss_pred hCCCCCchhc--ccccccccccceEEEEecce-EEecCCHHHHHHHHHh
Q 017030 240 RFPTANDFGS--EIIPASANEQFLKAYLFNDY-WEDIGTIRSFFEANLA 285 (378)
Q Consensus 240 ~~~~~~~~~~--~~l~~l~~~~~i~~~~~~~~-~~~i~t~~~~~~a~~~ 285 (378)
..+...+..+ +.|+.+-.+.+|+++..+++ |.+||||+||.+|++.
T Consensus 207 l~~s~lE~~e~leqlr~le~G~~i~~~~~~~~~~~~idtpeDl~~a~~~ 255 (256)
T 3tqd_A 207 WDACPAEKMEALEQLRILWHGGRIHMVVAKSKCPPGVDTEEDLERVRAY 255 (256)
T ss_dssp SCCCHHHHHHTCTTHHHHHTTCCCEEEECSSCCCCCCSSHHHHHHHHTT
T ss_pred CCCCcccchhhhHHHHHHHCCCeEEEEEeCCCCCCCcCCHHHHHHHHHh
Confidence 2222111111 23444556779999999875 8999999999999754
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.93 E-value=2.1e-25 Score=199.78 Aligned_cols=239 Identities=16% Similarity=0.215 Sum_probs=163.5
Q ss_pred ccceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCccc
Q 017030 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (378)
Q Consensus 6 ~~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (378)
.+++.|||||||.|+|| | +|+|+|++|| |||+|+++.+.++|+++|+|+++ .+.+.+++.+ +
T Consensus 16 ~M~~~aIIlA~G~stRl-p-----~K~L~~i~Gk-Pmi~~~l~~l~~~~i~~IvV~t~--~~~i~~~~~~---------~ 77 (264)
T 3k8d_A 16 HMSFVVIIPARYASTRL-P-----GKPLVDINGK-PMIVHVLERARESGAERIIVATD--HEDVARAVEA---------A 77 (264)
T ss_dssp --CCEEEEECCSCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH---------T
T ss_pred CCceEEEEEcCCCCCCC-C-----CcceeeECCe-EHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH---------c
Confidence 45689999999999999 2 5999999999 99999999999999999999884 4667776643 1
Q ss_pred CCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEe-cCHHHHHHHHHHcCCcEEEEE
Q 017030 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQSGADITISC 163 (378)
Q Consensus 86 ~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~-~d~~~~l~~h~~~~~~~ti~~ 163 (378)
+ +.++...+. .+.||++ +..+...+.. ...+.+++++||. ++. .++..+++.|.+.++++++++
T Consensus 78 g---~~v~~~~~~-------~~~Gt~~-i~~~~~~l~~---~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~ 143 (264)
T 3k8d_A 78 G---GEVCMTRAD-------HQSGTER-LAEVVEKCAF---SDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLA 143 (264)
T ss_dssp T---CEEEECCTT-------CCSHHHH-HHHHHHHHTC---CTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEE
T ss_pred C---CEEEEecCC-------CCCCHHH-HHHHHHHhcc---CCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEE
Confidence 2 112211111 1357876 7777777731 1158999999999 444 458999999988888999999
Q ss_pred eecCCC----CCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhh
Q 017030 164 LPMDDS----RASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRW 239 (378)
Q Consensus 164 ~~~~~~----~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~ 239 (378)
.+..++ .+..+ .|..|++|+++.|.++|.......+..+ ..+ ...+++.++|+|+|++++|+.+...
T Consensus 144 ~~v~d~~~~~~p~~v-kVv~d~~g~~l~fsr~~ip~~r~~~~~~-------~~~-~~~~~~~~~GiY~y~~~~l~~~~~~ 214 (264)
T 3k8d_A 144 VPIHNAEEAFNPNAV-KVVLDAEGYALYFSRATIPWDRDRFAEG-------LET-VGDNFLRHLGIYGYRAGFIRRYVNW 214 (264)
T ss_dssp EECCSHHHHTCTTSC-EEEECTTSBEEEEESSCCSCCHHHHHHC-------SSC-CCSCCEEECSEEEEEHHHHHHHHHS
T ss_pred EEcCCHHHccCCCce-EEEECCCCeEEEEecCCCCCCCcccccc-------ccc-cCCcceEEEEEEEECHHHHHHHHhC
Confidence 987652 11222 3567889999999999864221100000 000 0123678999999999999876542
Q ss_pred hCCCCCchhc--ccccccccccceEEEEec-ceEEecCCHHHHHHHHHhc
Q 017030 240 RFPTANDFGS--EIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLAL 286 (378)
Q Consensus 240 ~~~~~~~~~~--~~l~~l~~~~~i~~~~~~-~~~~~i~t~~~~~~a~~~~ 286 (378)
.+...+..+ +.|+.+-.+.+|+++... .+|.+|+||+||..|+..+
T Consensus 215 -~~~~lE~~e~leqlr~le~G~~I~~~~~~~~~~~~IdtpeDl~~a~~~l 263 (264)
T 3k8d_A 215 -QPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEM 263 (264)
T ss_dssp -CCCHHHHHHTCTTHHHHHTTCCEEEEECSCCCSCCCCSHHHHHHHHHHC
T ss_pred -CCChhhhHHHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHh
Confidence 122111111 233444457789998654 4689999999999998754
No 26
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.92 E-value=2.7e-24 Score=190.27 Aligned_cols=223 Identities=17% Similarity=0.210 Sum_probs=153.4
Q ss_pred ceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccCC
Q 017030 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (378)
Q Consensus 8 ~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 87 (378)
++.|||||||.|+||+ ||+|+|++|+ |||+|+++++.++ +++|+|++++ +++.+++.+ + .
T Consensus 2 ~~~aiIlA~G~g~R~~------~K~l~~i~g~-pli~~~l~~~~~~-~~~i~v~~~~--~~i~~~~~~---------~-~ 61 (234)
T 2y6p_A 2 RRAVIIPARLGSTRLK------EKPLKNLLGK-PLIRWVVEGLVKT-GERVILATDS--ERVKEVVED---------L-C 61 (234)
T ss_dssp CEEEEEECCSCCTTTT------TGGGCEETTE-EHHHHHHHHHHTT-TSCEEEEESC--HHHHHHHTT---------T-S
T ss_pred ceEEEEEcCCCCCCCC------CCcceeECCE-EHHHHHHHHHHHh-CCEEEEECCh--HHHHHHHHh---------c-e
Confidence 5789999999999996 9999999999 9999999999999 9999999876 567666642 1 1
Q ss_pred ceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEe-cCHHHHHHHHHHcCCcEEEEEee
Q 017030 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQSGADITISCLP 165 (378)
Q Consensus 88 ~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~-~d~~~~l~~h~~~~~~~ti~~~~ 165 (378)
. +.+. .+. ...|+++++ .+...++ .+.+++++||. +++ .++.++++.|.+.++.++++...
T Consensus 62 ~-~~~~--~~~-------~~~g~~~~~-~~~~~~~------~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~ 124 (234)
T 2y6p_A 62 E-VFLT--PSD-------LPSGSDRVL-YVVRDLD------VDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKD 124 (234)
T ss_dssp E-EEEC--CTT-------CCSHHHHHH-HHHTTCC------CSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEEC
T ss_pred E-EEEC--Ccc-------cccchHHHH-HHHHhCC------CCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCC
Confidence 1 2111 111 124787766 3444432 47899999999 777 55899999998877545555442
Q ss_pred cCC-CCCCcceEEEECCCCCEEEEEecCCcc-chhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCC
Q 017030 166 MDD-SRASDFGLMKINNEGRVLSFSEKPKGK-DLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (378)
Q Consensus 166 ~~~-~~~~~~g~v~~d~~~~v~~~~ek~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~ 243 (378)
... ..+..++ +..+++|++..+.|++... +.+ . ....+.++|+|+|+++.|.++.+.. +.
T Consensus 125 ~~~~~~~~~~~-~~~~~~g~v~~~~e~~~~~~~~~-------------~---~~~~~~~~giy~~~~~~l~~~~~~~-~~ 186 (234)
T 2y6p_A 125 KEAYERPEDVK-VVLDREGYALYFSRSPIPYFRKN-------------D---TFYPLKHVGIYGFRKETLMEFGAMP-PS 186 (234)
T ss_dssp SGGGGCTTSCE-EEECTTSBEEEEESSCCSCCSSC-------------C---SSCCEEEEEEEEEEHHHHHHHHHSC-CC
T ss_pred HHHhcCCCceE-EEEcCCCCEeeeecCCCCccccc-------------c---cceeeEEEEEEEcCHHHHHHHHhCC-CC
Confidence 111 1123344 3457789999999987531 100 0 0124679999999999987665421 11
Q ss_pred CCchhccccc---ccccccceEEEEecceEEecCCHHHHHHHHHhc
Q 017030 244 ANDFGSEIIP---ASANEQFLKAYLFNDYWEDIGTIRSFFEANLAL 286 (378)
Q Consensus 244 ~~~~~~~~l~---~l~~~~~i~~~~~~~~~~~i~t~~~~~~a~~~~ 286 (378)
..+. .+.+. .+..+.++.++..+++|.||+||+||..|++.+
T Consensus 187 ~~~~-~d~~~~~~~~~~g~~v~~~~~~~~~~dI~t~~dl~~a~~~~ 231 (234)
T 2y6p_A 187 KLEQ-IEGLEQLRLLENGIKIKVLITENYYHGVDTEEDLKIVEEKL 231 (234)
T ss_dssp HHHH-HHTCTHHHHHHTTCCCEEEECCSCCCCCCSHHHHHHHHHHC
T ss_pred ccch-hhHHHHHHHHHCCCeEEEEEeCCcccCCCCHHHHHHHHHHH
Confidence 1111 12222 233477899999999999999999999998765
No 27
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.91 E-value=2.2e-24 Score=190.59 Aligned_cols=214 Identities=18% Similarity=0.221 Sum_probs=135.1
Q ss_pred ccceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCccc
Q 017030 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (378)
Q Consensus 6 ~~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (378)
|++|.|||||||.|+||+|+ ||+|+|++|+ |||+|+++.+.++ +++|+|++ +..+++.+++.+.+
T Consensus 16 m~~~~~iIlA~G~g~R~~~~----~K~l~~i~g~-pli~~~l~~l~~~-~~~i~vv~-~~~~~~~~~~~~~~-------- 80 (232)
T 2xme_A 16 IKLMKAVILAAGLGTRLGGV----PKPLVRVGGC-EIILRTMKLLSPH-VSEFIIVA-SRYADDIDAFLKDK-------- 80 (232)
T ss_dssp CCCEEEEEEECC------CC----CGGGCEETTE-EHHHHHHHHHGGG-EEEEEEEE-STTHHHHHHHHTTS--------
T ss_pred cccceEEEECCcCcCcCCCC----CcEEeEECCE-EHHHHHHHHHHHh-CCEEEEEe-CChHHHHHHHHHhc--------
Confidence 55799999999999999976 9999999999 9999999999999 99999999 77777777753322
Q ss_pred CCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEecC-HHHHHHHHHHcCCcEEEEEe
Q 017030 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGADITISCL 164 (378)
Q Consensus 86 ~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~d-~~~~l~~h~~~~~~~ti~~~ 164 (378)
+. .+.++..... ..|++++++.+..+++ +++++++||++++.+ +..+++ .. . +++..
T Consensus 81 ~~-~~~~v~~~~~--------~~g~~~~i~~a~~~~~-------~~~lv~~~D~p~~~~~~~~l~~----~~-~-~~~~~ 138 (232)
T 2xme_A 81 GF-NYKIVRHDRP--------EKGNGYSLLVAKNHVE-------DRFILTMGDHVYSQQFIEKAVR----GE-G-VIADR 138 (232)
T ss_dssp CC-CEEEEECSCG--------GGCHHHHHHTTGGGCC-------SSEEEEETTEEECHHHHHHHTT----CC-E-EEEES
T ss_pred CC-cEEEEECCCC--------CCCcHHHHHHHHHHCC-------CCEEEEcCCcccCHHHHHHHHh----CC-C-cEEEc
Confidence 11 1334332211 1589999999887763 579999999987554 344433 21 2 22222
Q ss_pred ecCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCCC
Q 017030 165 PMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTA 244 (378)
Q Consensus 165 ~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~ 244 (378)
.....+...++.+..+ +|++..+.+++.. .+.+++|+|++++++|. .+++.....
T Consensus 139 ~~~~~~~~~~~~v~~~-~g~v~~~~~~~~~-----------------------~~~~~~g~~~~~~~~~~-~l~~~~~~g 193 (232)
T 2xme_A 139 EPRFVDIGEATKIRVE-DGRVAKIGKDLRE-----------------------FDCVDTGFFVLDDSIFE-HAEKLRDRE 193 (232)
T ss_dssp SCSSSCTTTSCEEEEE-TTEEEEEETTCSS-----------------------CSEEEEEEEEECTTHHH-HHGGGTTSS
T ss_pred cccccCCCcceEEEEc-CCEEEEeecCCCC-----------------------cceEEEEEEEECHHHHH-HHHHHHhcC
Confidence 1111123456767665 6899999887642 24578999999999986 444432111
Q ss_pred CchhcccccccccccceEEEEec-ceEEecCCHHHHHHHHHh
Q 017030 245 NDFGSEIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLA 285 (378)
Q Consensus 245 ~~~~~~~l~~l~~~~~i~~~~~~-~~~~~i~t~~~~~~a~~~ 285 (378)
+..++.+++.+++..+.++ ++|.+|+||+||.+++..
T Consensus 194 ----~~~l~~ll~~~~v~~~~~~~~~~~dI~tpeDl~~a~~~ 231 (232)
T 2xme_A 194 ----EIPLSEIVKLARLPVTYVDGELWMDVDTKEDVRRANRA 231 (232)
T ss_dssp ----CCCHHHHHHHHTCBEEECCSCCEEEEECC---------
T ss_pred ----hhHHHHHHHcCCEEEEEECCCCEEeCCCHHHHHHHHhh
Confidence 1224445555567777765 689999999999988754
No 28
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.91 E-value=3.9e-23 Score=183.99 Aligned_cols=237 Identities=15% Similarity=0.143 Sum_probs=160.2
Q ss_pred eeEEEEcCCCCcccccccccCcccceeecCeeeeeeeeh-hhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccCC
Q 017030 9 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPM-SNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (378)
Q Consensus 9 ~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l-~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 87 (378)
..|||||+|.|+||. +|+|+||+|+ |||+|++ +.+.++++++|+|+++. +.+.+++.+ ++.
T Consensus 2 ~~aiIlA~G~stR~~------~K~L~~i~Gk-Pli~~~i~~~~~~~~~~~vvVvt~~--~~i~~~~~~---------~g~ 63 (253)
T 4fcu_A 2 KHIVIPARFSSSRLP------GKPLLLIHDR-PMILRVVDQAKKVEGFDDLCVATDD--ERIAEICRA---------EGV 63 (253)
T ss_dssp EEEEEECCSCCTTST------TGGGSEETTE-EHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHT---------TTC
T ss_pred eEEEEEeCCCCCCCC------CCceeeECCe-EhHHHHHHHHHHhcCCCEEEEECCH--HHHHHHHHH---------cCC
Confidence 469999999999995 5999999999 9999999 99998899999999853 567666642 121
Q ss_pred ceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEec-CHHHHHHHHHHc-CCcEEEEEe
Q 017030 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRM-DYMDFVQNHRQS-GADITISCL 164 (378)
Q Consensus 88 ~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~~-d~~~~l~~h~~~-~~~~ti~~~ 164 (378)
..+. ..+. ...|+ +++..+...+... ..+.++++.||. +... .+..+++.|.+. ++.+..++.
T Consensus 64 ~v~~---~~~~-------~~~Gt-~~i~~a~~~~~~~---~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~ 129 (253)
T 4fcu_A 64 DVVL---TSAD-------HPSGT-DRLSEVARIKGWD---ADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCE 129 (253)
T ss_dssp CEEE---CCTT-------CCCHH-HHHHHHHHHHTCC---TTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEE
T ss_pred eEEE---eCCC-------CCChH-HHHHHHHHhcCcC---CCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeE
Confidence 2111 1111 12466 4777887777420 147899999999 5554 489999999876 344444444
Q ss_pred ecCC----CCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhh
Q 017030 165 PMDD----SRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWR 240 (378)
Q Consensus 165 ~~~~----~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~ 240 (378)
+..+ ..+..+ .|..|++|+++.|.++|..........+ .+.....++.++|+|+|++++|.++...
T Consensus 130 ~~~~~~~~~~p~~~-kvv~d~~g~~l~fsr~~ip~~r~~~~~~--------~~~~~~~~~~~~GiY~f~~~~l~~~~~~- 199 (253)
T 4fcu_A 130 PIHALDEFQRDSIV-KVVMSKQNEALYFSRATIPYDRDGAKRD--------EPTLHTQAFRHLGLYAYRVSLLQEYVTW- 199 (253)
T ss_dssp ECCCHHHHHCTTSC-EEEECTTSBEEEEESSCCSCCTTTSSSS--------SCCCCSCCEEEEEEEEEEHHHHHHHTTS-
T ss_pred EcCCHHHccCCCcc-EEEECCCCeEEEecCCCCCCCCCccccc--------ccccccceeEEEEEEEeCHHHHHHHHhC-
Confidence 4321 123343 5678889999999998864321110000 0000123577999999999999876432
Q ss_pred CCCCCchh-cccc---cccccccceEEEEecce-EEecCCHHHHHHHHHhcccC
Q 017030 241 FPTANDFG-SEII---PASANEQFLKAYLFNDY-WEDIGTIRSFFEANLALTAH 289 (378)
Q Consensus 241 ~~~~~~~~-~~~l---~~l~~~~~i~~~~~~~~-~~~i~t~~~~~~a~~~~l~~ 289 (378)
.+ ..+. .+.| +.+-.+.+|+++..+++ |.+|+||+||.+|++.+.++
T Consensus 200 ~~--~~le~~e~le~lr~l~~G~~I~~~~~~~~~~~~IdtpeDL~~a~~~l~~r 251 (253)
T 4fcu_A 200 EM--GKLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQADLDRLNNMPVES 251 (253)
T ss_dssp CC--CHHHHHHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHTSCGGG
T ss_pred CC--CcccchhHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 11 1221 1233 33345779999999999 99999999999999877543
No 29
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.90 E-value=7e-23 Score=182.39 Aligned_cols=227 Identities=18% Similarity=0.257 Sum_probs=155.8
Q ss_pred ceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCC-cEEEEEeecChhhHHHHHHhhccCCCCcccC
Q 017030 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGI-NKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (378)
Q Consensus 8 ~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi-~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~ 86 (378)
++.|||||||.|+|| | ||+|+|++|+ |||+|+++.+.++|+ ++|+|++++ +.+.+++.+. +
T Consensus 2 ~~~aiIlA~G~~~R~-~-----~K~l~~i~g~-pli~~~i~~~~~~~~~~~ivvv~~~--~~i~~~~~~~---------~ 63 (245)
T 1h7e_A 2 KAVIVIPARYGSSRL-P-----GKPLLDIVGK-PMIQHVYERALQVAGVAEVWVATDD--PRVEQAVQAF---------G 63 (245)
T ss_dssp CEEEEEECCSCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHHT---------T
T ss_pred CeEEEEEcCCcCCCC-C-----CCcccccCCc-hHHHHHHHHHHhCCCCCeEEEECCc--HHHHHHHHHc---------C
Confidence 589999999999999 5 9999999999 999999999999996 999999975 5677666431 1
Q ss_pred CceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEe-cCHHHHHHHHHHc-CCcEEEEE
Q 017030 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQS-GADITISC 163 (378)
Q Consensus 87 ~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~-~d~~~~l~~h~~~-~~~~ti~~ 163 (378)
+.++...+. ...|+++++. +...++ .+.+++++||. +.. .++..+++.|.+. ++++++.+
T Consensus 64 ---~~~~~~~~~-------~~~g~~~~~~-~~~~~~------~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~ 126 (245)
T 1h7e_A 64 ---GKAIMTRND-------HESGTDRLVE-VMHKVE------ADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLC 126 (245)
T ss_dssp ---CEEEECCSC-------CSSHHHHHHH-HHHHSC------CSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred ---CeEEeCCCc-------cCCcHHHHHH-HHHhCC------CCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEe
Confidence 223322111 1247766554 444443 47899999999 444 4489999999887 78888777
Q ss_pred eecCCCC--CCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhC
Q 017030 164 LPMDDSR--ASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRF 241 (378)
Q Consensus 164 ~~~~~~~--~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~ 241 (378)
.+.+... ......+..+++|++..|.+++....... ...+.+.++|+|+|+++.|.+++ ..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~r~~---------------~~~~~~~~~g~y~~~~~~l~~~~-~~- 189 (245)
T 1h7e_A 127 HAISAAEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNA---------------EKARYLKHVGIYAYRRDVLQNYS-QL- 189 (245)
T ss_dssp EEECHHHHTCTTSCEEEECTTCBEEEEESSCSSCCTTG---------------GGCCEEEEEEEEEEEHHHHHHGG-GS-
T ss_pred ecCCHHHhcCCCCcEEEECCCCcEEEeecCCCCCCccc---------------ccCceeEEEEEEEcCHHHHHHHH-hC-
Confidence 7762110 11122233467789999988654311000 00124679999999999886655 22
Q ss_pred CCCCch-hcccccccc---cccceEEEEecceEEecCCHHHHHHHHHhcc
Q 017030 242 PTANDF-GSEIIPASA---NEQFLKAYLFNDYWEDIGTIRSFFEANLALT 287 (378)
Q Consensus 242 ~~~~~~-~~~~l~~l~---~~~~i~~~~~~~~~~~i~t~~~~~~a~~~~l 287 (378)
+ ...+ ..+.++.+. .+.++.++..+++|.||+||+||..|+..+.
T Consensus 190 ~-~~~~~~td~~~~~~~~~~g~~v~~~~~~~~~~dIdtp~Dl~~a~~~l~ 238 (245)
T 1h7e_A 190 P-ESMPEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRALMA 238 (245)
T ss_dssp C-CCHHHHHHTCTTHHHHHTTCCEEEEECCCCCCCSSSHHHHHHHHHHHH
T ss_pred C-CCccccchhhHHHHHHHCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHH
Confidence 1 1111 124444432 3668999999999999999999999987664
No 30
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.89 E-value=3.7e-22 Score=179.51 Aligned_cols=243 Identities=18% Similarity=0.239 Sum_probs=159.6
Q ss_pred ceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccCC
Q 017030 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (378)
Q Consensus 8 ~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 87 (378)
++.|||||||.|+||. +|+|+|++|+ |||+|+++.+.++++++|+|++++ +.+.+++.+ + +
T Consensus 2 ~~~aiIlA~G~g~R~~------~K~l~~~~gk-pli~~~l~~l~~~~~~~ivvv~~~--~~i~~~~~~-~--------~- 62 (262)
T 1vic_A 2 SFTVIIPARFASSRLP------GKPLADIKGK-PMIQHVFEKALQSGASRVIIATDN--ENVADVAKS-F--------G- 62 (262)
T ss_dssp CCEEEEECCCCCSSST------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHH-T--------T-
T ss_pred CcEEEEEcCCCCCCCC------CCccccCCCe-EHHHHHHHHHHhCCCceEEEECCc--HHHHHHHHh-c--------C-
Confidence 5789999999999994 4999999999 999999999999999999999865 456666643 1 1
Q ss_pred ceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEe-cCHHHHHHHHHHcCCcEEEEEee
Q 017030 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQSGADITISCLP 165 (378)
Q Consensus 88 ~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~-~d~~~~l~~h~~~~~~~ti~~~~ 165 (378)
+.++...+. ...|++ .+..+...+... ..+.+++++||. +.. .++.++++.|.+.++++++++.+
T Consensus 63 --~~~~~~~~~-------~~~g~~-~~~~~~~~l~~~---~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~ 129 (262)
T 1vic_A 63 --AEVCMTSVN-------HNSGTE-RLAEVVEKLAIP---DNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVK 129 (262)
T ss_dssp --CEEEECCCS-------SCCHHH-HHHHHHHHTTCC---TTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred --CEEEECCcc-------ccCChH-HHHHHHHHhccC---CCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEe
Confidence 122221111 123665 455565555321 147899999998 444 45899999998888888888887
Q ss_pred cCCC---CCCcceEEEECCCCCEEEEEecCCc-cchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhC
Q 017030 166 MDDS---RASDFGLMKINNEGRVLSFSEKPKG-KDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRF 241 (378)
Q Consensus 166 ~~~~---~~~~~g~v~~d~~~~v~~~~ek~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~ 241 (378)
..+. ....++.+..+++|++..|.+++.. .+.+ +..+ +.....+ ....++.++|+|+|+++++..+....
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~g~v~~f~~~~~~~~r~~-~~~~---~~~~~~~-~p~~~~~~~giy~~~~~~l~~~~~~~- 203 (262)
T 1vic_A 130 IHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQ-FMNL---QDVQKVQ-LSDAYLRHIGIYAYRAGFIKQYVQWA- 203 (262)
T ss_dssp CCCHHHHTCTTSCEEEECTTSBEEEEESSCSSCCHHH-HTTC---SCGGGCC-CCTTCEEEEEEEEEEHHHHHHHHHSC-
T ss_pred cCCHHHhcCCCceEEEECCCCCEeeeecCCCCcCCcc-cccc---ccccccc-cccceEEEEEEEEeeHHHHHHHHhCC-
Confidence 7542 0134555666778999999887632 1110 0000 0000000 00125689999999999887653321
Q ss_pred CCCCchhcccccc--cc-cccceEEEEec-ceEEecCCHHHHHHHHHhcccC
Q 017030 242 PTANDFGSEIIPA--SA-NEQFLKAYLFN-DYWEDIGTIRSFFEANLALTAH 289 (378)
Q Consensus 242 ~~~~~~~~~~l~~--l~-~~~~i~~~~~~-~~~~~i~t~~~~~~a~~~~l~~ 289 (378)
+...+. .+++.. ++ .+.++.++..+ ++|.||+||+||..|+..+...
T Consensus 204 ~~~~~~-~e~~~~~~~l~~g~~v~~~~~~~~~~~dI~tpeDl~~a~~~l~~~ 254 (262)
T 1vic_A 204 PTQLEN-LEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDLEKVRAILAAN 254 (262)
T ss_dssp CCHHHH-HHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred CCchhh-hhhHHHHHHHHCCCeEEEEEeCCCCCCCCCCHHHHHHHHHHHHhc
Confidence 111111 112222 33 46689999998 7999999999999999887643
No 31
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.87 E-value=1.4e-20 Score=180.01 Aligned_cols=321 Identities=13% Similarity=0.133 Sum_probs=196.6
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeec-Ceeeeeeeehhhhhhc----C--CcEEEEEeecChhhHHHHHHhhccC
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIG-GAYRLIDVPMSNCINS----G--INKVYILTQYNSASLNRHLARAYNY 79 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~-g~~pli~~~l~~l~~~----g--i~~I~iv~~~~~~~i~~~l~~~~~~ 79 (378)
.++.+||||||.||||+ .+.||+|+|+. |+ |+|+++++++.+. | +..+++...+..+.+++|+++..
T Consensus 78 ~k~~vviLAGGlGTRLg---~~~PK~llpv~~gk-p~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~~-- 151 (469)
T 2icy_A 78 DKLVVLKLNGGLGTTMG---CTGPKSVIEVRDGL-TFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYT-- 151 (469)
T ss_dssp TTEEEEEEECCBSGGGT---CCSBGGGSEEETTE-EHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGGT--
T ss_pred ccceEEEEcCCccccCC---CCCCccccccCCCC-CHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhcc--
Confidence 67999999999999995 67999999999 99 9999999999887 6 44444444666888999997642
Q ss_pred CCCcccCCceEEEeccccCC---------------C--cCCCccccCcHHHHHHHH------HHhcCCCCCCCCeEEEEc
Q 017030 80 GSGVTFGDGCVEVLAATQTP---------------G--EAGKRWFQGTADAVRQFH------WLFEDPRNKVIEDVLILS 136 (378)
Q Consensus 80 ~~~~~~~~~~i~i~~~~~~~---------------~--~~~~~~~~Gt~~al~~~~------~~i~~~~~~~~~~~lv~~ 136 (378)
.|+.. +.++ .|.. . ..-...+.|||+++..+. .+++. +.++++|.+
T Consensus 152 ----~fG~~-I~~f--~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~----G~e~~~V~n 220 (469)
T 2icy_A 152 ----NSNVD-IHTF--NQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQ----GKEYVFVAN 220 (469)
T ss_dssp ----TSSSC-EEEE--ECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTT----TCCEEEEEE
T ss_pred ----cCCce-EEEE--EecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhc----CCCEEEEEE
Confidence 23322 2211 1110 0 001134789999997642 23321 258999999
Q ss_pred CCeEEecCHHHHHHHHHHcCCcEEEEEeecCCCCCCcceEEEECCCCC--EEEEEecCCccchhcccccchhcccccccc
Q 017030 137 GDHLYRMDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKINNEGR--VLSFSEKPKGKDLKAMAVDTTVLGLSKQEA 214 (378)
Q Consensus 137 gD~~~~~d~~~~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~~~--v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~ 214 (378)
+|++.......++.+|.++++++|+.+.+...+ ...+|.+... +|+ ++++.|+|...... . .+
T Consensus 221 ~DnL~~~~d~~ll~~~~~~~a~~t~~v~~k~~~-~~~~Gvl~~~-dg~~~vvE~~e~p~~~~~e-~-k~----------- 285 (469)
T 2icy_A 221 SDNLGAIVDLTILKHLIQNKNEYCMEVTPKTLA-DVKGGTLISY-EGKVQLLEIAQVPDEHVNE-F-KS----------- 285 (469)
T ss_dssp TTBTTCCCCHHHHHHHHHHTCSEEEEEEECCTT-CCSSCEEEEE-TTEEEEECGGGSCGGGHHH-H-HS-----------
T ss_pred CCcCCcccCHHHHHHHHHcCCCeeEEEEEeccC-CCceeEEEEE-CCEEEEEEEeccChhhhhh-h-cc-----------
Confidence 999877554478999999999999999887652 2468887752 355 56666666532100 0 00
Q ss_pred ccCcceeeeeEEEEeHHHHHHHHhhhCCCC-----------------CchhcccccccccccceEEEEe-cceEEecCCH
Q 017030 215 EEKPYIASMGVYLFKKEILLNLLRWRFPTA-----------------NDFGSEIIPASANEQFLKAYLF-NDYWEDIGTI 276 (378)
Q Consensus 215 ~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~-----------------~~~~~~~l~~l~~~~~i~~~~~-~~~~~~i~t~ 276 (378)
....+..|+|+|+|++++++++++...... ..+..++++. -....++.. ..+|.++.+.
T Consensus 286 ~~~~~~~N~g~y~~~~~~L~~i~~~~~~~lp~~v~~K~id~~~~~klE~~~~D~~~~---~~~~~~~~V~R~~F~PvKn~ 362 (469)
T 2icy_A 286 IEKFKIFNTNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRF---FDNAIGVNVPRSRFLPVKAS 362 (469)
T ss_dssp SSSCCEEEEEEEEEEHHHHHHHHHTTCCCCCCBCCEEEETTEEEECCBCCGGGGGGG---STTCEEEECCGGGCCBCCSH
T ss_pred ccccceeeEEEEEEcHHHHHHHHhcccCCchhhccceecCCCceEeehHhhHHHHHh---cCCeEEEEechhHcCcCCCH
Confidence 012356799999999999988876521111 0111222221 123455544 3579999999
Q ss_pred HHHHHHHHhcccCCCCccccCCC-----CcEE------cc-----CCC-CCCcee--eCceee-eeEEecCcEEcceEEe
Q 017030 277 RSFFEANLALTAHPPMFSFYDAT-----KPIY------TS-----RRN-LPPSKI--DDSKIV-DSIISHGSFITSSFIE 336 (378)
Q Consensus 277 ~~~~~a~~~~l~~~~~~~~~~~~-----~~i~------~~-----~~i-~~~~~i--~~~~i~-~s~Ig~~~~I~~~~i~ 336 (378)
.|++.+..++.....+....++. .+.. .. .+. ..|+.+ +.-+|. +...|.|+++.|.++.
T Consensus 363 ~dll~~~s~l~~~~~g~~~~~~~~~~~~~P~v~l~~~~~~v~~f~~rf~~~p~~~~~~~l~v~gdv~fg~~v~l~G~v~i 442 (469)
T 2icy_A 363 SDLLLVQSDLYTLVDGFVTRNKARTNPSNPSIELGPEFKKVATFLSRFKSIPSIVELDSLKVSGDVWFGSSIVLKGKVTV 442 (469)
T ss_dssp HHHHHHHSTTEEEETTEEEECTTCCSSSCCEEEECGGGCSHHHHHHTBSSCCBCTTEEEEEEESEEEECSSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCcEEecCcccCCCCCeEEcChhhhhHHHHHHhcCCCcccccCCeEEEEeeeEEcCCcEEEEEEEE
Confidence 99999998743221111111111 0110 00 000 022222 233443 6778999998754333
Q ss_pred eceEcCCCEECCCCEEeeeeeCCCCe
Q 017030 337 HSVVGIRSRINANVHLKVSPANPLCR 362 (378)
Q Consensus 337 ~SiI~~~~~Ig~~~~i~~sIi~~~~~ 362 (378)
.+-=|+...|-+|+.++|.++..+..
T Consensus 443 ~~~~~~~~~ip~g~~l~~~~~~~~~~ 468 (469)
T 2icy_A 443 AAKSGVKLEIPDRAVVENKNINGPED 468 (469)
T ss_dssp ECCTTCEEEECTTCEEESCEECCC--
T ss_pred EcCCCCeeecCCCCEeecceeeccCC
Confidence 22223445788999999998877654
No 32
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.85 E-value=3.9e-21 Score=170.00 Aligned_cols=223 Identities=12% Similarity=0.078 Sum_probs=138.0
Q ss_pred eeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhc-CCcEEEEEeecCh-hhHHHHHHhhccCCCCcccC
Q 017030 9 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINS-GINKVYILTQYNS-ASLNRHLARAYNYGSGVTFG 86 (378)
Q Consensus 9 ~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~-gi~~I~iv~~~~~-~~i~~~l~~~~~~~~~~~~~ 86 (378)
|.|||||||.|+||++ .++||+|+|++|+ |||+|+++.+.++ ++++|+|++++.. +.+.+++.+ + +..+.
T Consensus 3 ~~~iIlA~G~g~R~~~--~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~-~----~~~~~ 74 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGI--SNLPKQFLELGDR-PILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDK-Y----LPLYK 74 (236)
T ss_dssp EEEEEEEC-------------CGGGSEETTE-EHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHHH-H----CGGGG
T ss_pred eEEEEeCCccccccCC--CCCCCeeeeeCCc-cHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHHh-c----ccccc
Confidence 7899999999999997 6689999999999 9999999999998 5999999998876 556666543 2 11110
Q ss_pred CceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCC--CCCeEEEEcCCe-EEec-CHHHHHHHHHHcCCcEEEE
Q 017030 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNK--VIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADITIS 162 (378)
Q Consensus 87 ~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~--~~~~~lv~~gD~-~~~~-d~~~~l~~h~~~~~~~ti~ 162 (378)
....+.. . | .|++++++.++..+... .. ..+.+++++||. ++.. ++..+++.|.+.++ +++
T Consensus 75 -~~~~~~~--~-----~----~~~~~~i~~~l~~~~~~-~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~--~~~ 139 (236)
T 2vsh_A 75 -ERIIITK--G-----G----ADRNTSIKNIIEAIDAY-RPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA--VDT 139 (236)
T ss_dssp -GGEEEEE--C-----C----SSHHHHHHHHHHHHHHH-SCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE--EEE
T ss_pred -CceEEEC--C-----C----CchHHHHHHHHHHHHhh-ccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc--EEE
Confidence 0122211 0 0 36888999888877310 00 036789999999 5554 58999999887654 344
Q ss_pred EeecCCCCCCcceEEEECCCC-CEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhC
Q 017030 163 CLPMDDSRASDFGLMKINNEG-RVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRF 241 (378)
Q Consensus 163 ~~~~~~~~~~~~g~v~~d~~~-~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~ 241 (378)
+.+..+ + +..+++| ++..+.+++.. .. ....|+|+++.+.++++...
T Consensus 140 ~~~~~~--~-----~~~~~~g~~~~~~~~~~~~------------------------~~-~~~p~~f~~~~l~~~~~~~~ 187 (236)
T 2vsh_A 140 VVEAVD--T-----IVESTNGQFITDIPNRAHL------------------------YQ-GQTPQTFRCKDFMDLYGSLS 187 (236)
T ss_dssp EEECCS--C-----EEECSSSSBCCBCCCGGGE------------------------EE-EEEEEEEEHHHHHHHHHTCC
T ss_pred EEeccc--c-----EEEeCCCCeeeeecChHHh------------------------ee-ecCCcEecHHHHHHHHHHHH
Confidence 445443 1 2223567 77766654321 11 12488999998876665421
Q ss_pred CCCCch-hccccccccc-ccceEEEEecceEEecCCHHHHHHHHHhcc
Q 017030 242 PTANDF-GSEIIPASAN-EQFLKAYLFNDYWEDIGTIRSFFEANLALT 287 (378)
Q Consensus 242 ~~~~~~-~~~~l~~l~~-~~~i~~~~~~~~~~~i~t~~~~~~a~~~~l 287 (378)
.. ... ..+.+..+.. +.++..+..+++|.||+||+||..|+..+.
T Consensus 188 ~~-g~~~~~~~~~~l~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~~~ 234 (236)
T 2vsh_A 188 DE-EKEILTDACKIFVIKGKDVALAKGEYSNLKITTVTDLKIAKSMIE 234 (236)
T ss_dssp HH-HHHHCCSHHHHHHHTTCCEEEEECCTTCCCCCSHHHHHHHHHHTC
T ss_pred hc-CCCcCCCHHHHHHHcCCCEEEEECCccccCcCCHHHHHHHHHHhh
Confidence 10 000 1122222222 457888888889999999999999987654
No 33
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.85 E-value=8.7e-21 Score=166.29 Aligned_cols=214 Identities=18% Similarity=0.142 Sum_probs=146.8
Q ss_pred ceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcC-CcEEEEEeecChh-hHHHHHHhhccCCCCccc
Q 017030 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSA-SLNRHLARAYNYGSGVTF 85 (378)
Q Consensus 8 ~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~g-i~~I~iv~~~~~~-~i~~~l~~~~~~~~~~~~ 85 (378)
+|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++... .+.+++. +.
T Consensus 2 ~~~~vIlA~G~g~R~~---~~~~K~l~~~~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~-------~~-- 68 (223)
T 2xwl_A 2 ATVAVVPAAGSGERLR---AGRPKAFVTLGGT-PLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFG-------GE-- 68 (223)
T ss_dssp CEEEEEECCCCCGGGT---SSSCGGGSEETTE-EHHHHHHHHHHHHSCCSEEEEEECGGGHHHHHHHTC-------BT--
T ss_pred ceEEEEECCccCcccC---CCCCCeeeEECCe-EHHHHHHHHHhcCCCCCeEEEEEcccHHHHHHHHhc-------cC--
Confidence 5899999999999998 4689999999999 99999999999988 9999999987653 3444331 00
Q ss_pred CCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEec-CHHHHHHHHHHcCCcEEEEE
Q 017030 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADITISC 163 (378)
Q Consensus 86 ~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~~-d~~~~l~~h~~~~~~~ti~~ 163 (378)
.+.++.. . .+.+++++.++..++. .+.+++++||. +.+. ++..+++.|. .+.++++.+
T Consensus 69 ---~v~~~~~--~---------~~~~~~i~~al~~~~~-----~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~ 128 (223)
T 2xwl_A 69 ---DSVIVSG--G---------VDRTESVALALEAAGD-----AEFVLVHDAARALTPPALIARVVAALK-EGHSAVVPG 128 (223)
T ss_dssp ---TEEEEEC--C---------SSHHHHHHHHHTTCTT-----CSEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEE
T ss_pred ---CeEEEcC--C---------CCHHHHHHHHHHhcCC-----CCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEE
Confidence 1333321 1 2578889888877621 47889999998 5554 5899998883 345667766
Q ss_pred eecCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCC
Q 017030 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (378)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~ 243 (378)
.+..+ + ..+ .|++|++..+.|++.. ......|+|++..+..+++...
T Consensus 129 ~~~~d--~--~~~--~~~~g~~~~~~e~~~l-------------------------~~~~~p~~f~~~~l~~~~~~~~-- 175 (223)
T 2xwl_A 129 LAPAD--T--IKA--VDANGAVLGTPERAGL-------------------------RAVQTPQGFHADVLRRAYARAT-- 175 (223)
T ss_dssp ECCSS--C--EEE--ECTTSBEEECCCGGGE-------------------------EEECSCEEEEHHHHHHHHTTCC--
T ss_pred Eeccc--c--eEE--EcCCCcEEeecChHHh-------------------------eeeeCCcccCHHHHHHHHHHhh--
Confidence 66543 2 222 2667888888776421 1123468899988766654321
Q ss_pred CCchhccccccccc-ccceEEEEecceEEecCCHHHHHHHHHhccc
Q 017030 244 ANDFGSEIIPASAN-EQFLKAYLFNDYWEDIGTIRSFFEANLALTA 288 (378)
Q Consensus 244 ~~~~~~~~l~~l~~-~~~i~~~~~~~~~~~i~t~~~~~~a~~~~l~ 288 (378)
..+..+....+.. +.++..+..+++|.||+||+||..|+..+..
T Consensus 176 -~~~~~~~~~~~~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~l~~ 220 (223)
T 2xwl_A 176 -AGGVTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAH 220 (223)
T ss_dssp -SCCCCCHHHHHHTTTCCCEEEECCGGGCCCCSHHHHHHHHHHHHH
T ss_pred -CCCCccHHHHHHHcCCCEEEEECCcccccccCHHHHHHHHHHHhh
Confidence 1111122222222 4578888888899999999999999876643
No 34
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.85 E-value=4.2e-21 Score=170.92 Aligned_cols=230 Identities=13% Similarity=0.091 Sum_probs=147.5
Q ss_pred ccceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcC-CcEEEEEeecChhh-HHHHHHhhccCCCCc
Q 017030 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSAS-LNRHLARAYNYGSGV 83 (378)
Q Consensus 6 ~~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~g-i~~I~iv~~~~~~~-i~~~l~~~~~~~~~~ 83 (378)
|+++.|||||||.|+||++ .++||+|+|++|+ |||+|+++.+.+++ +++|+|++++.... +.+.+.... ..
T Consensus 1 M~~~~aIIlAaG~g~Rm~~--~~~pK~l~~l~Gk-pll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~~~-~~--- 73 (246)
T 3f1c_A 1 MSLIYAQILAGGKGTRMGN--VSMPKQFLPLNGK-PIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKKYI-SD--- 73 (246)
T ss_dssp -CCEEEEEECC-----C-C--SSCCGGGSEETTE-EHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHHHC-CC---
T ss_pred CCccEEEEECCccccccCC--CCCCCeEEEECCe-eHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHHhC-CC---
Confidence 3468999999999999986 4689999999999 99999999999987 99999999876543 444443321 11
Q ss_pred ccCCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCC-CCCCCeEEEEcCCe-EEec-CHHHHHHHHHHcCCcEE
Q 017030 84 TFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPR-NKVIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADIT 160 (378)
Q Consensus 84 ~~~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~-~~~~~~~lv~~gD~-~~~~-d~~~~l~~h~~~~~~~t 160 (378)
..+.++.. + .+..++++.++..+.+.. ....+.+++++||. +... .+.++++.|.+.++.+
T Consensus 74 ----~~~~~~~~-~----------~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a~i- 137 (246)
T 3f1c_A 74 ----DRIVVIEG-G----------EDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGAVD- 137 (246)
T ss_dssp ----TTEEEEEC-C----------SSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSEEE-
T ss_pred ----CCEEEECC-C----------CchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCCEE-
Confidence 11333321 1 257788998888875200 00147899999998 4444 4899999998876543
Q ss_pred EEEeecCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhh
Q 017030 161 ISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWR 240 (378)
Q Consensus 161 i~~~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~ 240 (378)
.+.+..+ .++..++++.+..+.+++.. +..-..++|+.+.|.+++++.
T Consensus 138 -~~~~~~d------~i~~~~~~~~v~~~~~r~~l-------------------------~~~qtpq~f~~~~L~~a~~~~ 185 (246)
T 3f1c_A 138 -TVIEALD------TIVESSNHEVITDIPVRDHM-------------------------YQGQTPQSFNMKKVFNHYQNL 185 (246)
T ss_dssp -EEEECSS------CEEECSSSSBCCBCCCGGGE-------------------------EEEEEEEEEEHHHHHHHHHTS
T ss_pred -EEEeccc------eEEEecCCCeEEEecChHHh-------------------------hhhcCCceeEHHHHHHHHHHH
Confidence 3444432 33444455666666555431 122356799999887777653
Q ss_pred CCCCCchhcccccccc-cccceEEEEecceEEecCCHHHHHHHHHhcccCC
Q 017030 241 FPTANDFGSEIIPASA-NEQFLKAYLFNDYWEDIGTIRSFFEANLALTAHP 290 (378)
Q Consensus 241 ~~~~~~~~~~~l~~l~-~~~~i~~~~~~~~~~~i~t~~~~~~a~~~~l~~~ 290 (378)
.........|.+..+. .+.++..+..+.+|.+|+||+||..|+..+..+.
T Consensus 186 ~~~~~~~~TD~~~~~~~~g~~v~~v~~~~~~~~Itt~~Dl~~ae~~l~~~~ 236 (246)
T 3f1c_A 186 TPEKKQILTDACKICLLAGDDVKLVKGEIFNIKITTPYDLKVANAIIQERI 236 (246)
T ss_dssp CHHHHHHCCCHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHHHHC
T ss_pred HHcCCCccCcHHHHHHHcCCCEEEEeCCCCccCcCCHHHHHHHHHHHhccc
Confidence 1110011122222222 2568999999989999999999999998876543
No 35
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.84 E-value=4.7e-20 Score=162.55 Aligned_cols=220 Identities=12% Similarity=0.110 Sum_probs=133.4
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcC-CcEEEEEeecChhhHHHHHHhhccCCCCccc
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~g-i~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (378)
++|.|||||||.|+||++ +.||+|+|++|+ |||+|+++.+.+++ +++|+|++++..+.+.+ +.+.. .
T Consensus 5 ~~~~aiIlA~G~g~R~~~---~~~K~l~~~~gk-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~~~-~------ 72 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFGA---DKPKQYVEIGSK-TVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQTAF-P------ 72 (231)
T ss_dssp CCEEEEEECC-------------CCSCCEETTE-EHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHHHC-T------
T ss_pred CceEEEEEcccccccCCC---CCCceEeEECCe-EHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHhcC-C------
Confidence 458999999999999985 579999999999 99999999999885 99999999887766765 54311 0
Q ss_pred CCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCC-CCCCCeEEEEcCCe-EEecC-HHHHHHHHHHcCCcEEEE
Q 017030 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPR-NKVIEDVLILSGDH-LYRMD-YMDFVQNHRQSGADITIS 162 (378)
Q Consensus 86 ~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~-~~~~~~~lv~~gD~-~~~~d-~~~~l~~h~~~~~~~ti~ 162 (378)
..+.++. . ..|++++++.+...+.... ....+.+++++||. +++.+ +..+++.|.+.+..+ +.
T Consensus 73 --~~i~~~~--~---------~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~~~~-~~ 138 (231)
T 1vgw_A 73 --QVRVWKN--G---------GQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGG-IL 138 (231)
T ss_dssp --TSEEECC--C---------CSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCTTCE-EE
T ss_pred --CceEEEc--C---------CCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCeE-EE
Confidence 1133331 1 1479999999888773100 00147899999998 55544 889998886554233 44
Q ss_pred EeecCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCC
Q 017030 163 CLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP 242 (378)
Q Consensus 163 ~~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~ 242 (378)
+.+..+. .... ++|++....++.. .....+.|+|+++.|.++++....
T Consensus 139 ~~~~~~~------~~~~-~~g~i~~~~~~~~-------------------------~~~~~~p~~f~~~~l~~~~~~~~~ 186 (231)
T 1vgw_A 139 AVPVADT------LKRA-ESGQISATVDRSG-------------------------LWQAQTPQLFQAGLLHRALAAENL 186 (231)
T ss_dssp EEECCSC------EEEE-SSSBEEEEECCTT-------------------------EEEEEEEEEEEHHHHHHHHHC---
T ss_pred Eeecccc------eEEe-CCCceEecCChHH-------------------------heeeeCCcEecHHHHHHHHHHHhh
Confidence 4444321 1112 3455554332210 111234899999988776654211
Q ss_pred CCCchhcccccccccccceEEEEecceEEecCCHHHHHHHHHhc
Q 017030 243 TANDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLAL 286 (378)
Q Consensus 243 ~~~~~~~~~l~~l~~~~~i~~~~~~~~~~~i~t~~~~~~a~~~~ 286 (378)
........++..+ +.++..+..++.|.||+||+||..|+..+
T Consensus 187 ~g~~~~~~~~~~~--~~~v~~v~~~~~~~dIdtpeDl~~a~~~l 228 (231)
T 1vgw_A 187 GGITDEASAVEKL--GVRPLLIQGDARNLKLTQPQDAYIVRLLL 228 (231)
T ss_dssp -CCCSHHHHHHTT--TCCCEEEECCTTCCCCCSHHHHHHHHHHC
T ss_pred cCCCcHHHHHHHc--CCCEEEEECCccccCcCCHHHHHHHHHHH
Confidence 1100011122221 45788888778899999999999998765
No 36
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.84 E-value=1.9e-20 Score=164.85 Aligned_cols=217 Identities=15% Similarity=0.125 Sum_probs=145.3
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcC-CcEEEEEeecChhhHHHHHHhhccCCCCccc
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~g-i~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (378)
+++.|||||||.|+||+ ||+|+|++|+ |||+|+++.+.+++ +++|+|++++ +.+.+++.+ +
T Consensus 3 m~~~aiIlA~G~g~R~~------~K~l~~i~gk-pll~~~l~~~~~~~~~~~ivvv~~~--~~i~~~~~~-~-------- 64 (228)
T 1ezi_A 3 KQNIAVILARQNSKGLP------LKNLRKMNGI-SLLGHTINAAISSKCFDRIIVSTDG--GLIAEEAKN-F-------- 64 (228)
T ss_dssp CEEEEEEECCSSCSSST------TTTTCEETTE-EHHHHHHHHHHHHCCCSEEEEEESC--HHHHHHHHH-T--------
T ss_pred CceEEEEecCCCCCCCC------CcccceeCCc-CHHHHHHHHHHhCCCCCEEEEECCC--HHHHHHHHH-c--------
Confidence 35779999999999996 9999999999 99999999999998 7999999953 445555532 1
Q ss_pred CCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEe-cCHHHHHHHHHHcCCcEEEEE
Q 017030 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQSGADITISC 163 (378)
Q Consensus 86 ~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~-~d~~~~l~~h~~~~~~~ti~~ 163 (378)
+ +.++........ ...|++++++.+++.+.. ..+.+++++||. +.. .++..+++.|.+.++++++.+
T Consensus 65 ~---~~~~~~~~~~~~----~~~g~~~sv~~~l~~~~~----~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~ 133 (228)
T 1ezi_A 65 G---VEVVLRPAELAS----DTASSISGVIHALETIGS----NSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSA 133 (228)
T ss_dssp T---CEEEECCC----------CHHHHHHHHHHHHHTC----CSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEE
T ss_pred C---CEEEeCchHHcC----CCCChHHHHHHHHHHhCC----CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEE
Confidence 1 111111100000 014789999999988842 137899999998 444 458889888877777777777
Q ss_pred eecCCCCCCcceEEEECCCCCEEEEEecCCc-cchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCC
Q 017030 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKG-KDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP 242 (378)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~ 242 (378)
.+..+. + ++....+++|.+..+.++... ...+. ....+..++|+|+++++.+.+.+
T Consensus 134 ~~~~~~-p--~~~~~~~~~g~~~~~~~~~~~~~~~~~---------------~~~~~~~~~giy~~~~~~l~~~~----- 190 (228)
T 1ezi_A 134 CPMEHH-P--LKTLLQINNGEYAPMRHLSDLEQPRQQ---------------LPQAFRPNGAIYINDTASLIANN----- 190 (228)
T ss_dssp EECSSC-T--TSCEEECC--CEEESSCHHHHTCCGGG---------------SCCEEEEEEEEEEEEHHHHHHHT-----
T ss_pred EecCCC-c--ceeeEEcCCCcEeeccccccccCCccc---------------CchhheeeeEEEEEeHHHHhhCC-----
Confidence 776542 2 333334677888888662110 00000 00123467899999998775431
Q ss_pred CCCchhcccccccccccceEEEEec-ceEEecCCHHHHHHHHHhcc
Q 017030 243 TANDFGSEIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLALT 287 (378)
Q Consensus 243 ~~~~~~~~~l~~l~~~~~i~~~~~~-~~~~~i~t~~~~~~a~~~~l 287 (378)
.+ .+.++..+..+ .+|.||+||+||..|+..+.
T Consensus 191 -------~~-----~g~~v~~~~~~~~~~~dIdtpeDl~~a~~~l~ 224 (228)
T 1ezi_A 191 -------CF-----FIAPTKLYIMSHQDSIDIDTELDLQQAENILN 224 (228)
T ss_dssp -------SS-----CCSSCEEEECCTGGGCCCCSHHHHHHHHHHHC
T ss_pred -------cc-----cCCceEEEEeCcccccCCCCHHHHHHHHHHHH
Confidence 01 15567777765 58999999999999987664
No 37
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.83 E-value=1.6e-20 Score=165.32 Aligned_cols=219 Identities=12% Similarity=0.105 Sum_probs=137.5
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhc-CCcEEEEEeecChhhHHHHHHhhccCCCCccc
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINS-GINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~-gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (378)
+++.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.++ ++++|+|++++..+.+.+++... +
T Consensus 3 ~~~~aiIlAaG~g~R~~---~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~~~~~~--------~ 70 (228)
T 2yc3_A 3 KSVSVILLAGGQGKRMK---MSMPKQYIPLLGQ-PIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEES--------I 70 (228)
T ss_dssp TCEEEEEECCCCC----------CGGGSEETTE-EHHHHHHHHHHHCTTEEEEEEECCGGGHHHHHTTTTT--------S
T ss_pred cceEEEEECCccccccC---CCCCccEeEECCE-EHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHHHh--------C
Confidence 46899999999999997 4579999999999 9999999999998 89999999988776665554321 1
Q ss_pred CCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEec-CHHHHHHHHHHcCCcEEEEE
Q 017030 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADITISC 163 (378)
Q Consensus 86 ~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~~-d~~~~l~~h~~~~~~~ti~~ 163 (378)
+. .+.++.. . .|..++++.+++.+.. ..+.++++.||. ++.. ++..+++.|.+.++ ++++
T Consensus 71 ~~-~v~~~~~--~---------~~~~~sv~~al~~~~~----~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~~--~i~~ 132 (228)
T 2yc3_A 71 DV-DLSFAIP--G---------KERQDSVYSGLQEIDV----NSELVCIHDSARPLVNTEDVEKVLKDGSAVGA--AVLG 132 (228)
T ss_dssp SS-EEEEECC--C---------SSHHHHHHHHHTTSCT----TCSEEEEEETTCTTCCHHHHHHHHHHHHHHSE--EEEE
T ss_pred CC-cEEEECC--C---------CCHHHHHHHHHHhhcc----CCCEEEEecCCCccCCHHHHHHHHHHHHhcCc--eEEE
Confidence 11 1333321 1 3788999999887742 136788999997 5554 48999998876653 4445
Q ss_pred eecCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCC
Q 017030 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (378)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~ 243 (378)
.+..+ .+...++++.+.++.+++. ..... ..|+|+++.|.+.++.....
T Consensus 133 ~~~~~------~~~~~~~~~~v~~~~~~~~------------------------~~~~~-~~~~f~~~~l~~~~~~~~~~ 181 (228)
T 2yc3_A 133 VPAKA------TIKEVNSDSLVVKTLDRKT------------------------LWEMQ-TPQVIKPELLKKGFELVKSE 181 (228)
T ss_dssp EECCS------CCCCBCTTSCBCCCCSCCC------------------------CEEEE-EEEEECHHHHHHHHHHHHHH
T ss_pred Eeccc------eEEEEcCCCceEEecCccc------------------------eEEEe-CCcEEEHHHHHHHHHHHHhc
Confidence 54432 1112244445543322211 12233 48999988776665432111
Q ss_pred CCchhccccccccc-ccceEEEEecceEEecCCHHHHHHHHHhcc
Q 017030 244 ANDFGSEIIPASAN-EQFLKAYLFNDYWEDIGTIRSFFEANLALT 287 (378)
Q Consensus 244 ~~~~~~~~l~~l~~-~~~i~~~~~~~~~~~i~t~~~~~~a~~~~l 287 (378)
.. ...+.+..+.. +.++..+..+..|.+|+||+||..|+..+.
T Consensus 182 ~~-~~~~~~~~l~~~g~~v~~~~~~~~~~dIdtpeDl~~a~~~l~ 225 (228)
T 2yc3_A 182 GL-EVTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILS 225 (228)
T ss_dssp TC-CCCSTTHHHHHSSSCCEEEECCTTCCCCCSHHHHHHHHHHHT
T ss_pred CC-CcccHHHHHHHcCCceEEEeCCccccCcCCHHHHHHHHHHHh
Confidence 10 11223222222 456765555667999999999999987664
No 38
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.6e-19 Score=173.66 Aligned_cols=325 Identities=11% Similarity=0.078 Sum_probs=193.9
Q ss_pred ccceeEEEEcCCCCcccccccccCcccceeec-Ceeeeeeeehhhhhhc----CCc-EEEEEee-cChhhHHHHHHhhcc
Q 017030 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIG-GAYRLIDVPMSNCINS----GIN-KVYILTQ-YNSASLNRHLARAYN 78 (378)
Q Consensus 6 ~~~~~avIla~G~g~rl~plt~~~pK~llpi~-g~~pli~~~l~~l~~~----gi~-~I~iv~~-~~~~~i~~~l~~~~~ 78 (378)
..++.+||||||.||||+ .+.||+|+||+ |+ |||+|+++++.+. |+. .++|+++ +..+.+++++.+...
T Consensus 90 ~~k~avViLAGG~GTRmg---s~~PK~l~~V~~gk-~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~~~~ 165 (488)
T 2i5k_A 90 LSKLAVLKLNGGLGTSMG---CVGPKSVIEVREGN-TFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSA 165 (488)
T ss_dssp GGGEEEEEECCCBSGGGT---CCSBSTTSCCBTTB-CHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGGGCS
T ss_pred cCCceEEEEcCCCcccCC---CCCCccccccCCCC-cHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHhccc
Confidence 467889999999999998 78999999999 99 9999999998876 543 3666665 888889999876321
Q ss_pred CCCCcccCCceEEEeccccCC------------CcC-----CCccccCcHHHHHHH-----HHHhcCCCCCCCCeEEEEc
Q 017030 79 YGSGVTFGDGCVEVLAATQTP------------GEA-----GKRWFQGTADAVRQF-----HWLFEDPRNKVIEDVLILS 136 (378)
Q Consensus 79 ~~~~~~~~~~~i~i~~~~~~~------------~~~-----~~~~~~Gt~~al~~~-----~~~i~~~~~~~~~~~lv~~ 136 (378)
+ +.. +.++ .|.. ... -...+.|||+++... ++.+.. .+.++++|++
T Consensus 166 f------g~~-i~~f--~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~---~g~~~v~V~n 233 (488)
T 2i5k_A 166 N------RIR-IRSF--NQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIA---QGREILFVSN 233 (488)
T ss_dssp S------SCE-EEEE--CCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHH---TTCCEEEEEC
T ss_pred c------Cce-EEEE--EeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHh---cCCCEEEEEe
Confidence 2 221 1111 1210 000 012468999999743 344411 1258999999
Q ss_pred CCeEEe-cCHHHHHHHHHHcCCcEEEEEeecCCCCCCcceEEEECCCCC--EEEEEecCCccchhcccccchhccccccc
Q 017030 137 GDHLYR-MDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKINNEGR--VLSFSEKPKGKDLKAMAVDTTVLGLSKQE 213 (378)
Q Consensus 137 gD~~~~-~d~~~~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~~~--v~~~~ek~~~~~~~~~~~~~~~~~~~~~~ 213 (378)
||++.. .|+. ++.+|.++++++++.+.+..++ ...||.+..+ +|+ ++++.+.+...... .. +
T Consensus 234 gDnL~~~~d~~-~L~~~~~~~a~~t~~v~~~~~p-~~~yG~Iv~~-dG~~~iVE~~e~~~e~~~~-~~-----------~ 298 (488)
T 2i5k_A 234 GDNLGATVDLK-ILNHMIETGAEYIMELTDKTRA-DVKGGTLISY-DGQVRLLEVAQVPKEHIDE-FK-----------N 298 (488)
T ss_dssp TTBSSCCCCHH-HHHHHHHSCCSEEEEEEECCGG-GSSSCEEEEE-TTEEEEECGGGSCTTSHHH-HT-----------C
T ss_pred CCcCCCcccHH-HHHHHHhcCCcEEEEEEEecCC-CCceeEEEEE-CCcEEEEEeccCCHHHHhh-cc-----------c
Confidence 999776 4675 6689999999999999887652 2459988764 565 33333444332110 00 0
Q ss_pred cccCcceeeeeEEEEeHHHHHHHHhhhCCCCC---------------------chhcccccccccccceEEEEec-ceEE
Q 017030 214 AEEKPYIASMGVYLFKKEILLNLLRWRFPTAN---------------------DFGSEIIPASANEQFLKAYLFN-DYWE 271 (378)
Q Consensus 214 ~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~---------------------~~~~~~l~~l~~~~~i~~~~~~-~~~~ 271 (378)
.......|+|+|+|+.+.|.+++++...... .+..++++.+ + ...++..+ ..|.
T Consensus 299 -~~~~~~~Ntgi~~f~~~~L~~~l~~~~~~lp~~v~~K~i~~~~~~~~~~qlE~~~~d~~~~~--~-~~~~~~V~R~~F~ 374 (488)
T 2i5k_A 299 -IRKFTNFNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHF--D-GAHGVVVPRSRFL 374 (488)
T ss_dssp -TTTCCEEEEEEEEEEHHHHHHHHHTTCCCCCCBCCEECCCC-----CEECCBCCGGGGGGGS--S-SCEEEEECGGGCC
T ss_pred -ccccCEEEEEEEEEeHHHHHHHHhhccCCCcceecCccccCCCCCCceEEeeehhhhHHhhc--c-CceEEEecccccc
Confidence 0112467999999999999888875321110 1111222211 1 22333332 3588
Q ss_pred ecCCHHHHHHHHHhcccCCCCccccCCC-CcEEccCC--------------CC-CCcee--eCceee-eeEEecCcEEcc
Q 017030 272 DIGTIRSFFEANLALTAHPPMFSFYDAT-KPIYTSRR--------------NL-PPSKI--DDSKIV-DSIISHGSFITS 332 (378)
Q Consensus 272 ~i~t~~~~~~a~~~~l~~~~~~~~~~~~-~~i~~~~~--------------i~-~~~~i--~~~~i~-~s~Ig~~~~I~~ 332 (378)
.+.+..+++.+..++.....+.....+. ..+.+... +. .|..+ ..-+|+ +...|+|+.+.|
T Consensus 375 PvKn~~~ll~~~~~~~~~~~g~~~~~~~~~e~~P~v~~~~~~~~~~~~~~rf~~~p~i~~~~~l~v~Gdv~fg~~v~l~G 454 (488)
T 2i5k_A 375 PVKTCSDLLLVKSDLFRLEHGSLKLDPSRFGPNPLIKLGSHFKKVSGFNARIPHIPKIVELDHLTITGNVFLGKDVTLRG 454 (488)
T ss_dssp BCCSHHHHHHHTSTTEEEETTEEEECTTCCSSCCEEEECGGGSSHHHHHHHCSSCCBCTTEEEEEEESSEEECTTCEEEE
T ss_pred cccCCccHHHHHHHHHHHhcCcEeecCCcCCCCCeEEECCcccchhhHHhhcCCCccccccceEEEEeeeEEcCCcEEEE
Confidence 8999888876665433211111111111 00111000 11 13333 122332 677888888876
Q ss_pred eEEeeceEcCCCEECCCCEEeeeeeCCCCeEee
Q 017030 333 SFIEHSVVGIRSRINANVHLKVSPANPLCRRIW 365 (378)
Q Consensus 333 ~~i~~SiI~~~~~Ig~~~~i~~sIi~~~~~~~~ 365 (378)
+.+..+-=|....|-+|+.++|.++..+..|-|
T Consensus 455 ~v~i~a~~~~~~~ip~g~~l~n~~~~~~~~~~~ 487 (488)
T 2i5k_A 455 TVIIVCSDGHKIDIPNGSILENVVVTGNLQILE 487 (488)
T ss_dssp EEEEECCTTCCEEECTTCEEEEEEEEEEEEEEE
T ss_pred EEEEEcCCCCeEEeCCCCEEecceeeccccccc
Confidence 544433335567899999999998877666543
No 39
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.82 E-value=2.7e-21 Score=170.66 Aligned_cols=200 Identities=15% Similarity=0.154 Sum_probs=135.3
Q ss_pred ceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccCC
Q 017030 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (378)
Q Consensus 8 ~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 87 (378)
+|.|||||||. |||++.+...||+|+|++|+ |||+|+++.+..++. +|+|++. . +++.+++ +
T Consensus 2 ~~~~vIlAaG~-tRl~~r~~~~~K~l~~i~g~-pll~~~l~~l~~~~~-~ivvv~~-~-~~i~~~~------------~- 63 (232)
T 2dpw_A 2 RPSAIVLAGGK-EAWAERFGVGSKALVPYRGR-PMVEWVLEALYAAGL-SPVYVGE-N-PGLVPAP------------A- 63 (232)
T ss_dssp CCEEEEECCCB-CSGGGTTTCSBGGGSEETTE-ETHHHHHHHHHHTTC-EEEEESC-C-SSCSSCC------------S-
T ss_pred ceeEEEECCCC-CccccccCCCCceeeEECCE-EHHHHHHHHHHhcCC-EEEEEeC-h-HHHhhhc------------C-
Confidence 58999999999 77776666689999999999 999999999999998 8888654 2 3332211 1
Q ss_pred ceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe--EEecCHHHHHHHHHHcCCcEEEEEee
Q 017030 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH--LYRMDYMDFVQNHRQSGADITISCLP 165 (378)
Q Consensus 88 ~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~--~~~~d~~~~l~~h~~~~~~~ti~~~~ 165 (378)
+.+ .. ..|++++++.+.+.++ +.+++++||. +...++..+++ | +.++++++...+
T Consensus 64 --~~~---~~---------~~g~~~~i~~a~~~~~-------~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~ 120 (232)
T 2dpw_A 64 --LTL---PD---------RGGLLENLEQALEHVE-------GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVP 120 (232)
T ss_dssp --EEE---CC---------CSSHHHHHHHHHHTCC-------SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEE
T ss_pred --eEe---cC---------CCCHHHHHHHHHHHcC-------CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEee
Confidence 233 11 2589999999987763 7899999999 44445888888 6 566778877766
Q ss_pred cCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhC----
Q 017030 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRF---- 241 (378)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~---- 241 (378)
.++. ...|+.+ .+++..+.||| .+++|+|+|+++++..+.+...
T Consensus 121 ~~~~-~~~~~~~----~~~v~~~~ek~---------------------------~~~~g~~~~~~~~l~~~~~~~~~~~~ 168 (232)
T 2dpw_A 121 KEAV-EARFPRT----KRTYARLREGT---------------------------FTGGNLLLLDKSLFRKALPLARRVVA 168 (232)
T ss_dssp HHHH-HHHCTTC----CCCCEEETTEE---------------------------EEECSEEEEEHHHHTTTHHHHHHHHH
T ss_pred ccch-hhhCCCc----ceeEEEEecCc---------------------------eeeeeEEEEcHHHHHHHHHHHHHHHH
Confidence 4321 1223322 23566665543 3689999999998865433210
Q ss_pred -CC-------------------CCchhccccccccc--ccceEEEEe--cceEEecCCHHHHH
Q 017030 242 -PT-------------------ANDFGSEIIPASAN--EQFLKAYLF--NDYWEDIGTIRSFF 280 (378)
Q Consensus 242 -~~-------------------~~~~~~~~l~~l~~--~~~i~~~~~--~~~~~~i~t~~~~~ 280 (378)
.. ......+++..++. +.++..+.. .+.|.|||||+||.
T Consensus 169 ~~~~P~~~~~~~~~~~l~~~~~ge~~l~~~~~~~~~~~g~~v~~v~~~~~~~~~dIdtpeDl~ 231 (232)
T 2dpw_A 169 LRKRPLALARLVGWDVLLKLLLGRLSLAEVEARAQRILGVEARALVTPYPEVGVDVDREEDLV 231 (232)
T ss_dssp TTTCHHHHHHHHCHHHHHHHHHTCCCHHHHHHHHHHHHSSCEEEEECSCGGGTCCCCSHHHHC
T ss_pred hccCHHHHHHHHCHHHHHHHHhccCCHHHHHHHHHHHhCcEEEEEecCChhhccCCCChhhcc
Confidence 00 01112233333332 367888887 46799999999984
No 40
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.80 E-value=5e-19 Score=156.50 Aligned_cols=221 Identities=14% Similarity=0.132 Sum_probs=140.2
Q ss_pred cccceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcC-CcEEEEEeecChhhHHHHHHhhccCCCCc
Q 017030 5 DARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSASLNRHLARAYNYGSGV 83 (378)
Q Consensus 5 ~~~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~g-i~~I~iv~~~~~~~i~~~l~~~~~~~~~~ 83 (378)
++++|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++..+.+.+ +..
T Consensus 4 ~~~~~~~iIlA~G~g~R~~---~~~~K~l~~i~g~-pll~~~i~~l~~~~~~~~ivvv~~~~~~~~~~-~~~-------- 70 (236)
T 1i52_A 4 THLDVCAVVPAAGFGRRMQ---TECPKQYLSIGNQ-TILEHSVHALLAHPRVKRVVIAISPGDSRFAQ-LPL-------- 70 (236)
T ss_dssp -CCCEEEEEEECCCCGGGC---CSSCGGGSEETTE-EHHHHHHHHHHTSTTEEEEEEEECTTCCSGGG-SGG--------
T ss_pred CCCceeEEEECCcCccccC---CCCCcceeeECCE-EHHHHHHHHHHhCCCCCeEEEEeCccHHHHHH-HHh--------
Confidence 3567999999999999997 4579999999999 99999999999887 89999999876555543 321
Q ss_pred ccCCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEecC-HHHHHHHHHHcCCcEEE
Q 017030 84 TFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQNHRQSGADITI 161 (378)
Q Consensus 84 ~~~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~~d-~~~~l~~h~~~~~~~ti 161 (378)
++...+.++.. . .|+.++++.++..+.. .+.+++++||. +.+.+ +..+++.+.+.++.. +
T Consensus 71 -~~~~~v~~~~~--~---------~g~~~~i~~al~~~~~-----~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~-~ 132 (236)
T 1i52_A 71 -ANHPQITVVDG--G---------DERADSVLAGLKAAGD-----AQWVLVHDAARPCLHQDDLARLLALSETSRTGG-I 132 (236)
T ss_dssp -GGCTTEEEEEC--C---------SSHHHHHHHHHHTSTT-----CSEEEECCTTCTTCCHHHHHHHHGGGGTCSSCE-E
T ss_pred -cCCCCEEEECC--C---------CCHHHHHHHHHHhcCC-----CCEEEEEcCccccCCHHHHHHHHHHHHhcCCeE-E
Confidence 11111333321 1 3788899988877742 47899999998 55554 788888776554233 3
Q ss_pred EEeecCCCCCCcceEEEECCC-CCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhh
Q 017030 162 SCLPMDDSRASDFGLMKINNE-GRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWR 240 (378)
Q Consensus 162 ~~~~~~~~~~~~~g~v~~d~~-~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~ 240 (378)
.+.+..+ +....+++ |++....+... .+...+.++|+.+.+.++++..
T Consensus 133 ~~~~~~~------~~~~~~~~~~~i~~~~~~~~-------------------------i~~~~~p~~f~~~~l~~~~~~~ 181 (236)
T 1i52_A 133 LAAPVRD------TMKRAEPGKNAIAHTVDRNG-------------------------LWHALTPQFFPRELLHDCLTRA 181 (236)
T ss_dssp EEEECCS------CEEEECTTSSSEEEEECCTT-------------------------CEEEEEEEEEEHHHHHHHHHHH
T ss_pred EEEeccc------cEEEEcCCCCceeeccChHh-------------------------heeeeCCceecHHHHHHHHHHH
Confidence 3344332 11112333 45543321100 1112266788887776665442
Q ss_pred CCCCCchh--cccccccccccceEEEEecceEEecCCHHHHHHHHHhcccC
Q 017030 241 FPTANDFG--SEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAH 289 (378)
Q Consensus 241 ~~~~~~~~--~~~l~~l~~~~~i~~~~~~~~~~~i~t~~~~~~a~~~~l~~ 289 (378)
......+. ..++.. .+.++..+..++.|.||+||+||..|+..+.++
T Consensus 182 ~~~g~~~td~~~~~~~--~~~~v~~v~~~~~~~dIdtpeDl~~a~~~~~~~ 230 (236)
T 1i52_A 182 LNEGATITDEASALEY--CGFHPQLVEGRADNIKVTRPEDLALAEFYLTRT 230 (236)
T ss_dssp HHTTCCCCSHHHHHHH--TTCCCEEEECCTTCCCCCSHHHHHHHHHHHCC-
T ss_pred HhcCCCcccHHHHHHH--cCCCEEEEecCccccccCCHHHHHHHHHHHHHh
Confidence 11111110 012222 145677787778899999999999998877544
No 41
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.80 E-value=3.8e-19 Score=156.52 Aligned_cols=217 Identities=15% Similarity=0.186 Sum_probs=134.4
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcC-CcEEEEEeecChhhHHHHHHhhccCCCCccc
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~g-i~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (378)
+++.|||||||.|+||. +|+|+|++|+ |||+|+++.+.+++ +++|+|++. .+.+.+++.+ +
T Consensus 2 ~~~~aiIlA~G~s~R~~------~K~l~~i~Gk-pli~~~i~~~~~~~~~~~ivv~~~--~~~i~~~~~~---------~ 63 (229)
T 1qwj_A 2 PHLAALVLARGGSKGIP------LKNIKRLAGV-PLIGWVLRAALDAGVFQSVWVSTD--HDEIENVAKQ---------F 63 (229)
T ss_dssp CCEEEEEECCSCCSSSS------CTTTSEETTE-EHHHHHHHHHHHHTCCSEEEEEES--CHHHHHHHHH---------T
T ss_pred CcEEEEEEcCCCCCCCC------CcccceECCE-EHHHHHHHHHHhCCCcCEEEEECC--hHHHHHHHHH---------c
Confidence 46889999999999994 5999999999 99999999999998 599998883 4567666643 1
Q ss_pred CCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEe-cCHHHHHHHHHHcCCcEEEEE
Q 017030 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQSGADITISC 163 (378)
Q Consensus 86 ~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~-~d~~~~l~~h~~~~~~~ti~~ 163 (378)
+ +.++........ + ..+..++++.+...+.. .+.+++++||. +.+ .++..+++.|.+.+++.++.+
T Consensus 64 g---~~~~~~~~~~~~---~-~~~~~~~v~~al~~~~~-----~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~ 131 (229)
T 1qwj_A 64 G---AQVHRRSSETSK---D-SSTSLDAIVEFLNYHNE-----VDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSV 131 (229)
T ss_dssp T---CEEEECCGGGSS---T-TCCHHHHHHHHHTTCTT-----CSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEE
T ss_pred C---CEEEeChhhhcC---C-CCcHHHHHHHHHHhcCC-----CCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 1 112211110000 0 02344788888776632 47899999998 444 458999999988777765555
Q ss_pred eecCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCC
Q 017030 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (378)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~ 243 (378)
.+..+ +..++. .| + +..|.+++...... . ...+.....+..++|+|+|+++.| +.
T Consensus 132 ~~~~~--p~~~~v--~~--~-~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~n~giY~~~~~~l---~~----- 186 (229)
T 1qwj_A 132 VRRHQ--FRWSEI--QK--G-VREVTEPLNLNPAK---R-------PRRQDWDGELYENGSFYFAKRHLI---EM----- 186 (229)
T ss_dssp EEECC--CEECCC--CS--S-TTCCCCBSSSBTTB---C-------CCTTTSCCEEEEEEEEEEEEHHHH---HT-----
T ss_pred eeccC--hhHhhc--cc--c-cccccccccccccc---c-------cCCCCCCceEEEeeEEEEEEHHHh---cc-----
Confidence 54332 223322 22 2 11122211100000 0 000000012567999999999887 11
Q ss_pred CCchhcccccccccccceEEEEec-ceEEecCCHHHHHHHHHhccc
Q 017030 244 ANDFGSEIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLALTA 288 (378)
Q Consensus 244 ~~~~~~~~l~~l~~~~~i~~~~~~-~~~~~i~t~~~~~~a~~~~l~ 288 (378)
.+..+..+..+..+ ++|.||+||+||..|+..+..
T Consensus 187 ----------~~~~g~~~~~~~~~~~~~~dIdt~~Dl~~a~~~~~~ 222 (229)
T 1qwj_A 187 ----------GYLQGGKMAYYEMRAEHSVDIDVDIDWPIAEQRVLR 222 (229)
T ss_dssp ----------TCSSCSSEEEEECCGGGCCCHHHHCSHHHHHHHHHH
T ss_pred ----------ccccCCeEEEEECCcccccCCCCHHHHHHHHHHHHH
Confidence 11223344332554 689999999999999887643
No 42
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.76 E-value=5.8e-18 Score=145.45 Aligned_cols=187 Identities=12% Similarity=0.174 Sum_probs=126.5
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccC
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~ 86 (378)
+++.|||||||.|+||+ .||+|+|++|+ |||+|+++.+..+++++|+|++++..+++.+++.. ++
T Consensus 4 ~~~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~---------~~ 68 (199)
T 2waw_A 4 SRVTGVVLAAGYSRRLG-----TPKQLLPLGDT-TLLGATLAMARRCPFDQLIVTLGGAADEVLEKVEL---------DG 68 (199)
T ss_dssp CCEEEEEEESSCCTTTT-----SCGGGCEETTE-EHHHHHHHHHHTSSCSEEEEEECTTHHHHHHHSCC---------TT
T ss_pred CceEEEEECCCCCCCCC-----CCEEeCEeCcc-CHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhcc---------CC
Confidence 45899999999999996 79999999999 99999999999999999999998876667666532 11
Q ss_pred CceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeE-Ee-cCHHHHHHHHHHcCCcEEEEEe
Q 017030 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHL-YR-MDYMDFVQNHRQSGADITISCL 164 (378)
Q Consensus 87 ~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~-~~-~d~~~~l~~h~~~~~~~ti~~~ 164 (378)
+.++..... ..|++++++.+...+.. ..+.+++++||.. .+ .++..+++. +.++++++...
T Consensus 69 ---~~~~~~~~~--------~~g~~~~i~~al~~~~~----~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~~~~~~ 131 (199)
T 2waw_A 69 ---LDIVLVDDA--------GLGCSSSLKSALTWVDP----TAEGIVLMLGDQPGITASAVASLIAG--GRGATIAVCEY 131 (199)
T ss_dssp ---SEEEECCCC--------CTTCCCHHHHHHHTSCT----TCSEEEEEETTCTTCCHHHHHHHHHH--HTTCSEEEEEE
T ss_pred ---CEEEECCCc--------ccCHHHHHHHHHHhhhc----cCCeEEEEeCCcccCCHHHHHHHHhh--cCCCCEEEEec
Confidence 122221111 25889999999888731 1478999999994 33 447888876 44554432211
Q ss_pred ecCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCCC
Q 017030 165 PMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTA 244 (378)
Q Consensus 165 ~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~ 244 (378)
+++ + ..-++|+++.+..+.. . ...
T Consensus 132 -----------------~g~-------~------------------------------~~P~~~~~~~l~~~~~-~-~~~ 155 (199)
T 2waw_A 132 -----------------ANG-------I------------------------------GHPFWVSRGVFGDLAE-L-HGD 155 (199)
T ss_dssp -----------------TTE-------E------------------------------EEEEEEEGGGHHHHHT-C-SST
T ss_pred -----------------CCc-------c------------------------------cCCEEEcHHHHHHHHh-c-CCC
Confidence 010 0 0113678887765542 1 111
Q ss_pred Cchhccccccccc--ccceEEEEe-cceEEecCCHHHHHHHHHhc
Q 017030 245 NDFGSEIIPASAN--EQFLKAYLF-NDYWEDIGTIRSFFEANLAL 286 (378)
Q Consensus 245 ~~~~~~~l~~l~~--~~~i~~~~~-~~~~~~i~t~~~~~~a~~~~ 286 (378)
.. +..++. +.++..+.. .++|.||+||+||..++..+
T Consensus 156 ~~-----~~~~l~~~~~~v~~~~~~~~~~~dIdtpeDl~~~~~~~ 195 (199)
T 2waw_A 156 KG-----VWRLIESGRHGVRRIRVDADVPLDVDTWDDYERLLASV 195 (199)
T ss_dssp TC-----HHHHHHSSSSCEEEEECSSCCCCCCSSHHHHHHHHHHH
T ss_pred HH-----HHHHHHhCcccEEEEEcCcccccCCCCHHHHHHHHHHH
Confidence 11 222222 245777776 46899999999999988765
No 43
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.76 E-value=1.6e-18 Score=148.75 Aligned_cols=130 Identities=23% Similarity=0.326 Sum_probs=92.6
Q ss_pred eeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccCCc
Q 017030 9 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDG 88 (378)
Q Consensus 9 ~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~~~ 88 (378)
|+|||||||.|+||+| .||+|+|++|+ |||+|+++.+.++++++|+|++++..+.+.+++...+.+..
T Consensus 1 m~aiIlA~G~s~R~~~----~~K~l~~~~g~-pli~~~l~~l~~~~~~~v~vv~~~~~~~i~~~~~~~~~~~~------- 68 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG----VEKPLIKLCGR-CLIDYVVSPLLKSKVNNIFIATSPNTPKTKEYINSAYKDYK------- 68 (196)
T ss_dssp CEEEEEC----CGGGG----SCGGGCEETTE-EHHHHHHHHHHSSSCCCEEEECCTTCHHHHHHHHHHTTTTT-------
T ss_pred CEEEEECCCCCCcCCC----CCccEEEECCE-EHHHHHHHHHHHCCCCEEEEEeCCChHHHHHHHHhhccCCC-------
Confidence 6899999999999987 79999999999 99999999999999999999999888888888876432111
Q ss_pred eEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEe-cCHHHHHHHHHH-----cCCcEEE
Q 017030 89 CVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQ-----SGADITI 161 (378)
Q Consensus 89 ~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~-~d~~~~l~~h~~-----~~~~~ti 161 (378)
.+.++... ..|++++++.+...+ .+.+++++||. +.. .++.++++.|.+ .+.+..+
T Consensus 69 ~~~~~~~~----------~~g~~~si~~al~~~-------~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~ 131 (196)
T 3rsb_A 69 NIVVIDTS----------GKGYIEDLNECIGYF-------SEPFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALA 131 (196)
T ss_dssp EEEE------------------CCCCCTTTTTC-------SSCEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEE
T ss_pred CEEEEECC----------CCCcHHHHHHHHHhC-------CCCEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEE
Confidence 13333211 146777787776655 38999999999 334 448999999987 5666666
Q ss_pred EEeecC
Q 017030 162 SCLPMD 167 (378)
Q Consensus 162 ~~~~~~ 167 (378)
.+.+..
T Consensus 132 ~~~p~~ 137 (196)
T 3rsb_A 132 VMIPKE 137 (196)
T ss_dssp EEEETT
T ss_pred EEEEcc
Confidence 666654
No 44
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.76 E-value=3.5e-18 Score=146.66 Aligned_cols=121 Identities=14% Similarity=0.251 Sum_probs=89.8
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccC
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~ 86 (378)
++|.+||||||.|+||. .||+|+|++|+ |||+|+++.+.++++++|+|++++..+++.+++.. ++
T Consensus 4 ~~~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pll~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~---------~~ 68 (197)
T 2wee_A 4 TQITGVVLAAGRSNRLG-----TPKQLLPYRDT-TVLGATLDVARQAGFDQLILTLGGAASAVRAAMAL---------DG 68 (197)
T ss_dssp SEEEEEEEECCCCTTTS-----SCGGGSEETTE-EHHHHHHHHHHHTTCSEEEEEECTTHHHHHHHSCC---------TT
T ss_pred CceEEEEECCCCcccCC-----CCeEcCeeCCc-cHHHHHHHHHHhcCCCcEEEEeCCCHHHHHHHhcc---------CC
Confidence 45899999999999995 79999999999 99999999999999999999998876667666532 11
Q ss_pred CceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEec-CHHHHHHHHHHcCCcE
Q 017030 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADI 159 (378)
Q Consensus 87 ~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~~-d~~~~l~~h~~~~~~~ 159 (378)
+.++..... ..|++++++.+...+.. ..+.+++++||. +++. .+..+++. +.++++
T Consensus 69 ---~~~~~~~~~--------~~g~~~~i~~al~~~~~----~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~i 126 (197)
T 2wee_A 69 ---TDVVVVEDV--------ERGCAASLRVALARVHP----RATGIVLMLGDQPQVAPATLRRIIDV--GPATEI 126 (197)
T ss_dssp ---SEEEECC------------CCHHHHHHHHTTSCT----TEEEEEEEETTCTTCCHHHHHHHHHH--GGGSSE
T ss_pred ---CEEEECCCc--------ccCHHHHHHHHHHHhcc----cCCeEEEEeCCcCCCCHHHHHHHHhh--cCCCCE
Confidence 223221111 25899999999877731 147899999999 4444 47888876 444443
No 45
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.74 E-value=7.7e-18 Score=148.80 Aligned_cols=205 Identities=13% Similarity=0.089 Sum_probs=125.7
Q ss_pred ceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccCC
Q 017030 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (378)
Q Consensus 8 ~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 87 (378)
++.|||||||.|+||++ . ||+|+|++|+ |||+|+++. ..++++|+|++++. +.+ +.. .+
T Consensus 25 ~~~aiILAgG~s~Rm~~---~-~K~l~~i~gk-pli~~~l~~--~~~~~~ivvv~~~~---~~~-~~~---------~~- 83 (236)
T 2px7_A 25 EVSVLIPAAGNGLRLGR---G-PKAFLQVGGR-TLLEWTLAA--FRDAAEVLVALPPG---AEP-PKG---------LG- 83 (236)
T ss_dssp CCEEEEECCC----------C-CGGGCBCSSS-BHHHHHHHH--TTTCSEEEEEECTT---CCC-CTT---------CS-
T ss_pred ceEEEEEcCCCCccCCC---C-CCeEEEECCE-EHHHHHHHh--cCCCCeEEEEeCHH---HHH-hhc---------CC-
Confidence 45699999999999983 3 9999999999 999999999 67899999999751 111 110 01
Q ss_pred ceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEecC-HHHHHHHHHHcCCcEEEEEee
Q 017030 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQNHRQSGADITISCLP 165 (378)
Q Consensus 88 ~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~~d-~~~~l~~h~~~~~~~ti~~~~ 165 (378)
+.++.. . .|...+++.++..+. .+.+++++||. +++.+ +..+++.+.+.+ ..+.+.+
T Consensus 84 --v~~~~~--~---------~~~~~~i~~al~~~~------~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~--~~i~~~~ 142 (236)
T 2px7_A 84 --AVFLEG--G---------ATRQASVARLLEAAS------LPLVLVHDVARPFVSRGLVARVLEAAQRSG--AAVPVLP 142 (236)
T ss_dssp --CEEEEC--C---------SSHHHHHHHHHHHCC------SSEEEECCTTCCCCCHHHHHHHHHHHHHHS--EEEEEEE
T ss_pred --cEEEeC--C---------CchHHHHHHHHHHcC------CCeEEEecCccccCCHHHHHHHHHHHHhcC--CeEEEEe
Confidence 233321 1 267888888887774 37899999997 55554 888888876654 3344444
Q ss_pred cCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCCCC
Q 017030 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTAN 245 (378)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~ 245 (378)
..+ . .. ..+ +|++..+.++... ..+. ..++|+++.|.++++.......
T Consensus 143 ~~~--~--~~--~~~-~G~v~~~~~~~~~------------------------~~~~-~~~~f~~~~l~~~~~~~~~~g~ 190 (236)
T 2px7_A 143 VPD--T--LM--APE-GEAYGRVVPREAF------------------------RLVQ-TPQGFFTALLREAHAYARRKGL 190 (236)
T ss_dssp CCS--E--EE--EEC-SSSCEEEECGGGC------------------------EEEC-SCEEEEHHHHHHHHHHHHHHTC
T ss_pred cCC--c--EE--Eec-CCeEEecCChHhh------------------------cccc-CCeEEcHHHHHHHHHHHHhcCC
Confidence 432 1 11 124 6777766542110 1222 3567888877665543211000
Q ss_pred ch--hcccccccccccceEEEEecceEEecCCHHHHHHHHHhccc
Q 017030 246 DF--GSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTA 288 (378)
Q Consensus 246 ~~--~~~~l~~l~~~~~i~~~~~~~~~~~i~t~~~~~~a~~~~l~ 288 (378)
.+ ...++.. .+.++..+..++.|.||+||+||..|+..+..
T Consensus 191 ~~~d~~~ll~~--~~~~v~~v~~~~~~~dIdtpeDl~~a~~~l~~ 233 (236)
T 2px7_A 191 EASDDAQLVQA--LGYPVALVEGEATAFKITHPQDLVLAEALARV 233 (236)
T ss_dssp CCSSHHHHHHH--TTCCCEEEECCTTCCCCCSHHHHHHHHHHHTC
T ss_pred CchhHHHHHHH--cCCcEEEEECCccccCCCCHHHHHHHHHHHHh
Confidence 00 0112221 14578888888899999999999999877653
No 46
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.74 E-value=7.8e-17 Score=141.31 Aligned_cols=218 Identities=17% Similarity=0.172 Sum_probs=145.7
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcC-CcEEEEEeecCh-hhHHHHHHhhccCCCCcc
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNS-ASLNRHLARAYNYGSGVT 84 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~g-i~~I~iv~~~~~-~~i~~~l~~~~~~~~~~~ 84 (378)
.++.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++.. +.+.+.+..
T Consensus 6 ~~~~aIIlAaG~g~Rmg---~~~~K~l~~l~Gk-pll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~--------- 72 (231)
T 3q80_A 6 GEVVAIVPAAGSGERLA---VGVPKAFYQLDGQ-TLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH--------- 72 (231)
T ss_dssp CCEEEEEECCCCCTTTC---SSSCGGGCEETTE-EHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG---------
T ss_pred CceEEEEECCCCCccCC---CCCCceEEEECCe-EHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC---------
Confidence 35889999999999997 4679999999999 99999999999874 899999998765 445544421
Q ss_pred cCCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEecC-HHHHHHHHHHcCCcEEEE
Q 017030 85 FGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQNHRQSGADITIS 162 (378)
Q Consensus 85 ~~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~~d-~~~~l~~h~~~~~~~ti~ 162 (378)
.+.++... .+..++++.++..+... ...+.++++.||. +...+ +..+++.+.+ +.++.+.
T Consensus 73 ----~v~~v~gg-----------~~r~~sv~~gl~~~~~~--~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~-~~~~~i~ 134 (231)
T 3q80_A 73 ----RAMIVAGG-----------SNRTDTVNLALTVLSGT--AEPEFVLVHDAARALTPPALVARVVEALRD-GYAAVVP 134 (231)
T ss_dssp ----GCEEEECC-----------SSHHHHHHHHHGGGC-----CCSEEEECCTTCTTCCHHHHHHHHHHHHT-TCSEEEE
T ss_pred ----CeEEEcCC-----------CchHHHHHHHHHHhhhc--CCCCEEEEEcCCcCCCCHHHHHHHHHHHhh-cCCeEEE
Confidence 02233211 13468888888887531 0136899999998 55555 7888887764 3556666
Q ss_pred EeecCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCC
Q 017030 163 CLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP 242 (378)
Q Consensus 163 ~~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~ 242 (378)
..+..+. .. ..+++|.|.+..+... -+.+.+ -++|+.+.|.+++++...
T Consensus 135 ~~p~~dt----~~--~~~~~g~v~~~~~r~~------------------------l~~~qT-Pq~F~~~~L~~a~~~~~~ 183 (231)
T 3q80_A 135 VLPLSDT----IK--AVDANGVVLGTPERAG------------------------LRAVQT-PQGFTTDLLLRSYQRGSL 183 (231)
T ss_dssp EECCSSC----EE--EECTTSBEEECCCGGG------------------------EEEECS-CEEEEHHHHHHHHHHHTC
T ss_pred EEeccCC----EE--EEcCCCcEEEecchhh------------------------eEEEcC-CcEEEHHHHHHHHHHHHh
Confidence 6666552 12 2466787776643211 133455 599999998888776432
Q ss_pred CC-Cchhcccccccc-cccceEEEEecceEEecCCHHHHHHHHHhc
Q 017030 243 TA-NDFGSEIIPASA-NEQFLKAYLFNDYWEDIGTIRSFFEANLAL 286 (378)
Q Consensus 243 ~~-~~~~~~~l~~l~-~~~~i~~~~~~~~~~~i~t~~~~~~a~~~~ 286 (378)
+. .....|....+. .+.++..+.-+..+..|++|+|+..|+..+
T Consensus 184 ~n~~~~~TD~~~~~~~~g~~v~~v~g~~~n~kIt~p~Dl~~ae~~l 229 (231)
T 3q80_A 184 DLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229 (231)
T ss_dssp -----CCSSSHHHHHHTTCCCEEEECCGGGCCCCSHHHHHHHHHHH
T ss_pred hcCCCCCCcHHHHHHHcCCcEEEEECCccccCcCCHHHHHHHHHHh
Confidence 11 111122222111 256788777666789999999999998754
No 47
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.74 E-value=4.5e-17 Score=143.67 Aligned_cols=214 Identities=17% Similarity=0.204 Sum_probs=134.9
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcC-CcEEEEEeecChhhH-HHHHHhhccCCCCcc
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSASL-NRHLARAYNYGSGVT 84 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~g-i~~I~iv~~~~~~~i-~~~l~~~~~~~~~~~ 84 (378)
..|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++....+ .+++ .
T Consensus 12 ~~~~aiILAaG~s~Rm~---~~~~K~l~~i~Gk-pli~~~i~~l~~~~~~~~ivVv~~~~~~~~~~~~~------~---- 77 (234)
T 1vpa_A 12 HMNVAILLAAGKGERMS---ENVPKQFLEIEGR-MLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRV------F---- 77 (234)
T ss_dssp CCEEEEEEECCCCGGGC---CSSCGGGCEETTE-ETTHHHHHHHHHCTTCSEEEEEECGGGHHHHHTTC------C----
T ss_pred ccCeEEEEcCcchhhcC---CCCCceEEEECCe-EHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHh------c----
Confidence 46899999999999997 3579999999999 99999999999988 899999998765432 2221 1
Q ss_pred cCCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEecC-HHHHHHHHHHcCCcEEEE
Q 017030 85 FGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQNHRQSGADITIS 162 (378)
Q Consensus 85 ~~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~~d-~~~~l~~h~~~~~~~ti~ 162 (378)
+.. .+.... . | .+..++++.++..+... ..+.+++++||. +++.+ +..+++.+.+.+ ..+.
T Consensus 78 ~~~-~~~~~~--g-----g----~~~~~sv~~al~~~~~~---~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~--~~i~ 140 (234)
T 1vpa_A 78 HEK-VLGIVE--G-----G----DTRSQSVRSALEFLEKF---SPSYVLVHDSARPFLRKKHVSEVLRRARETG--AATL 140 (234)
T ss_dssp CTT-EEEEEE--C-----C----SSHHHHHHHHHHHHGGG---CCSEEEEEETTSCCCCHHHHHHHHHHHHHHS--EEEE
T ss_pred cCC-ceEEeC--C-----C----CcHHHHHHHHHHHhhhc---CCCEEEEecCcccCCCHHHHHHHHHHHHhcC--CEEE
Confidence 111 122110 0 0 13678888888777420 036788888998 55554 888988887654 3343
Q ss_pred EeecCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCC
Q 017030 163 CLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP 242 (378)
Q Consensus 163 ~~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~ 242 (378)
+.+..+ +....+++| + .+.++.. .+..-..++|+.+.+.++++...
T Consensus 141 ~~~~~~------~~~~~~~~g-v-~~~~r~~-------------------------~~~~~~p~~f~~~~l~~~~~~~~- 186 (234)
T 1vpa_A 141 ALKNSD------ALVRVENDR-I-EYIPRKG-------------------------VYRILTPQAFSYEILKKAHENGG- 186 (234)
T ss_dssp EEECCS------EEEEEETTE-E-EEECCTT-------------------------EEEEEEEEEEEHHHHHHHHTTCC-
T ss_pred EEecCC------cEEEECCCC-c-ccCChhH-------------------------eeeecCCccccHHHHHHHHHhcC-
Confidence 444432 122234456 5 5544311 01112345888888876654310
Q ss_pred CCCchhcccccccccccceEEEEecceEEecCCHHHHHHHHHhccc
Q 017030 243 TANDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTA 288 (378)
Q Consensus 243 ~~~~~~~~~l~~l~~~~~i~~~~~~~~~~~i~t~~~~~~a~~~~l~ 288 (378)
.... ...++.. .+.++..+..++.|.||+||+||..|+..+..
T Consensus 187 ~~~~-~~~~~~~--~g~~v~~v~~~~~~~dIdtpeDl~~a~~~l~~ 229 (234)
T 1vpa_A 187 EWAD-DTEPVQK--LGVKIALVEGDPLCFKVTFKEDLELARIIARE 229 (234)
T ss_dssp CCSS-SHHHHHT--TTCCCEEEECCGGGCCCCSTTHHHHHHHHHHH
T ss_pred CCCc-HHHHHHH--cCCcEEEEECCchhcCCCCHHHHHHHHHHHhc
Confidence 0000 0112221 14567777777789999999999999876543
No 48
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.67 E-value=2e-15 Score=145.01 Aligned_cols=332 Identities=14% Similarity=0.122 Sum_probs=190.0
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeec-CeeeeeeeehhhhhhcCCc-----EEEEEe-ecChhhHHHHHH-hhcc
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIG-GAYRLIDVPMSNCINSGIN-----KVYILT-QYNSASLNRHLA-RAYN 78 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~-g~~pli~~~l~~l~~~gi~-----~I~iv~-~~~~~~i~~~l~-~~~~ 78 (378)
.++.+||||||.||||+ .+.||+|+||+ |+ |+|+++++++.+.|.. .++|.+ .+..+.+++|++ +...
T Consensus 74 ~k~avViLAGGlGTRLg---~~~PK~llpV~~gk-~fLe~~ie~l~~~~~~~g~~ip~viMtS~~t~e~t~~~f~~~~~~ 149 (505)
T 2oeg_A 74 QSTVVLKLNGGLGTGMG---LCDAKTLLEVKDGK-TFLDFTALQVQYLRQHCSEHLRFMLMDSFNTSASTKSFLKARYPW 149 (505)
T ss_dssp HTEEEEEEECCCCGGGT---CCSCGGGSEEETTE-EHHHHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHHHHHHHCHH
T ss_pred hcceEEEEcCCcccccC---CCCCCcccccCCCC-cHHHHHHHHHHHHHHhcCCCcCEEEEeCCCCHHHHHHHHhhhhhc
Confidence 37899999999999999 77999999999 99 9999999999987533 455555 566788999997 4211
Q ss_pred CCC---Ccc-cCCceEEEeccc------cCCCcCCCccccCcHHHHHHH-----HHH-hcCCCCCCCCeEEEEcCCeEEe
Q 017030 79 YGS---GVT-FGDGCVEVLAAT------QTPGEAGKRWFQGTADAVRQF-----HWL-FEDPRNKVIEDVLILSGDHLYR 142 (378)
Q Consensus 79 ~~~---~~~-~~~~~i~i~~~~------~~~~~~~~~~~~Gt~~al~~~-----~~~-i~~~~~~~~~~~lv~~gD~~~~ 142 (378)
++- ... |....+-.+... ....+.-...+.|+|+++... ++. ++. +.++++|.++|++..
T Consensus 150 fGl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~----G~e~i~V~N~DNL~~ 225 (505)
T 2oeg_A 150 LYQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQ----GYRYMFVSNGDNLGA 225 (505)
T ss_dssp HHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHT----TCCEEEEECTTCTTC
T ss_pred cCCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhc----CCCEEEEEECCcccc
Confidence 211 111 111111111000 000000123467999998754 232 321 258999999999874
Q ss_pred -cCHHHHHHHHHHcCCcEEEEEeecCCCCCCcceEEEEC------CCCC---------EEEEEecCCccchhcccccchh
Q 017030 143 -MDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKIN------NEGR---------VLSFSEKPKGKDLKAMAVDTTV 206 (378)
Q Consensus 143 -~d~~~~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d------~~~~---------v~~~~ek~~~~~~~~~~~~~~~ 206 (378)
.|+ .++.+|.++++++++.+.+...+ ...+|++..+ .+|+ ++++.+-|...... .. .
T Consensus 226 ~~D~-~llg~~~~~~ad~~~~v~~k~~~-d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p~e~~~~-~~-g--- 298 (505)
T 2oeg_A 226 TIDK-RVLAYMEKEKIDFLMEVCRRTES-DKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKADMES-FQ-D--- 298 (505)
T ss_dssp CCCH-HHHHHHHHHTCSEEEEEEECCTT-CCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSCGGGHHH-HH-C---
T ss_pred ccCH-HHHHHHHhcCCcEEEEEEEecCC-ccceeEEEEecccccccCCccccccCceeEEEeccCChhhhhc-cc-C---
Confidence 467 89999999999999999987652 2467877662 4577 44444444332110 00 0
Q ss_pred ccccccccccCcceeeeeEEEEeHHHHHHHHhhh--C---CCC-----Cc-----h-----hcccccccccc-cceEEEE
Q 017030 207 LGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWR--F---PTA-----ND-----F-----GSEIIPASANE-QFLKAYL 265 (378)
Q Consensus 207 ~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~--~---~~~-----~~-----~-----~~~~l~~l~~~-~~i~~~~ 265 (378)
.......|+...+|+-+.+.++++.. . +.. .+ . .+.++.+.+.- ....++.
T Consensus 299 --------~~~f~~~Ninn~~~~l~~l~~~~~~~~~~~~Lp~~vn~K~i~~~d~~~~~~~qlE~~~~d~~~~~~~~~~~~ 370 (505)
T 2oeg_A 299 --------INKYSFFNTNNLWIRLPVLLETMQEHGGTLPLPVIRNEKTVDSSNSASPKVYQLETAMGAAIAMFESASAIV 370 (505)
T ss_dssp --------TTTTCEEEEEEEEEEHHHHHHHHHHTTSSCCCCCEEEEEESSSSCTTSCEEEEEECCGGGGGGSCTTCEEEE
T ss_pred --------ccccCeeEEEEEEEEHHHHHHHHhhhcCccCCcceecccccCCCCCCCCCeEEEeEHHHHHHHhcCcceEEE
Confidence 01123478999999999998887762 1 110 00 0 01111111110 1233444
Q ss_pred ec-ceEEecCCHHHHHHHHHhcccCCCCcccc-C-------CCCcEEcc---------CCCCC--Cceee--Cceee-ee
Q 017030 266 FN-DYWEDIGTIRSFFEANLALTAHPPMFSFY-D-------ATKPIYTS---------RRNLP--PSKID--DSKIV-DS 322 (378)
Q Consensus 266 ~~-~~~~~i~t~~~~~~a~~~~l~~~~~~~~~-~-------~~~~i~~~---------~~i~~--~~~i~--~~~i~-~s 322 (378)
++ ..|..+.+..|++.+..++........+. . |...+.+. .++.. |+..+ ..+|+ +.
T Consensus 371 V~R~~FsPvKn~~dl~~~~sdly~~~~~~~~~~~~~~~~~~p~i~l~p~~~~~~~~~~~r~~~g~psi~~~~~L~v~G~~ 450 (505)
T 2oeg_A 371 VPRSRFAPVKTCADLLALRSDAYVVTDDFRLVLDDRCHGHPPVVDLDSAHYKMMNGFEKLVQHGVPSLVECKRVTVKGLV 450 (505)
T ss_dssp CCGGGCCCCSSHHHHHHHHSTTEEECTTCCEEECGGGTTCCCEEEECHHHHSSHHHHHHHSTTCCCBCTTEEEEEEESSE
T ss_pred eccceeecccCCCCHHHHHHHHHhhcCCceEEEcccccCcCCeEEEChhHcCcHHHHHHhcCCCCCccccCcEEEEEcce
Confidence 33 24788999999998888765433211111 1 11011110 11111 11111 12232 45
Q ss_pred EEecCcEEcceEEeece-EcCCCEECCCCEEeeeeeCCCC
Q 017030 323 IISHGSFITSSFIEHSV-VGIRSRINANVHLKVSPANPLC 361 (378)
Q Consensus 323 ~Ig~~~~I~~~~i~~Si-I~~~~~Ig~~~~i~~sIi~~~~ 361 (378)
+.|+|+.+.|+.+..+- =|...+|-+|+.|+|..+.+.-
T Consensus 451 ~f~~~v~l~G~v~i~a~~~~~~~~ip~g~~l~n~~~~~~~ 490 (505)
T 2oeg_A 451 QFGAGNVLTGTVTIENTDSASAFVIPDGAKLNDTTASPQQ 490 (505)
T ss_dssp ECCTTCEEEEEEEEECCSCSSCEECCTTCEEESCEECC--
T ss_pred EEccCcEEEEEEEEEecCCCCcEEeCCCCEEeCceechhh
Confidence 67888888765444333 3556688888888888776654
No 49
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.67 E-value=3.3e-17 Score=141.08 Aligned_cols=179 Identities=14% Similarity=0.116 Sum_probs=110.8
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccC
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~ 86 (378)
+++.|||||||.|+||+ .||+|+|++|+ |||+|+++.+..+ +++|+|++++... +++. +
T Consensus 13 ~~~~~iILA~G~g~Rmg-----~~K~ll~i~g~-pll~~~l~~l~~~-~~~i~vv~~~~~~---~~~~-----------~ 71 (201)
T 2e8b_A 13 KVNTCYVLAGGKSKRFG-----EDKLLYEIKGK-KVIERVYETAKSV-FKEVYIVAKDREK---FSFL-----------N 71 (201)
T ss_dssp SCCEEEEEEESSCCCCS-----TTHHHHHHHHH-HHHHHHHHHHHTT-CSEEEEEESCSGG---GGGG-----------T
T ss_pred cCceEEEECCCCCccCC-----CCcccceECce-EHHHHHHHHHHHh-CCEEEEEeCcHHH---hhcC-----------C
Confidence 35689999999999997 79999999999 9999999999988 9999999987653 2221 1
Q ss_pred CceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEecC-HHH-HHHHHHHcCCcEEEEE
Q 017030 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMD-FVQNHRQSGADITISC 163 (378)
Q Consensus 87 ~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~~d-~~~-~l~~h~~~~~~~ti~~ 163 (378)
+.++..... ..|++++++.+.+.+. .+.+++++||. +.+.+ +.. ++ +.++++.
T Consensus 72 ---~~~v~~~~~--------~~g~~~~i~~al~~~~------~~~~lv~~~D~P~i~~~~i~~~l~------~~~~~v~- 127 (201)
T 2e8b_A 72 ---APVVLDEFE--------ESASIIGLYTALKHAK------EENVFVLSGDLPLMKKETVLYVLE------NFKEPVS- 127 (201)
T ss_dssp ---CCEEECCCS--------SCCHHHHHHHHHHHCS------SSEEEEEETTCTTCCHHHHHHHHH------TCCSSEE-
T ss_pred ---ceEEecCCC--------CCCcHHHHHHHHHHcC------CCCEEEEeCCcCcCCHHHHHHHHh------cCCEEEE-
Confidence 112221111 2589999999988875 48999999999 44544 455 44 1111110
Q ss_pred eecCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCC
Q 017030 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (378)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~ 243 (378)
.+ +|+ .....|+| |+++++..+.+.....
T Consensus 128 ---------------~~-~g~----------------------------------~~p~~giy-~~~~~~~~l~~~~~~g 156 (201)
T 2e8b_A 128 ---------------VA-KTE----------------------------------KLHTLVGV-YSKKLLEKIEERIKKG 156 (201)
T ss_dssp ---------------EE-ESS----------------------------------SEEEEEEE-EEGGGHHHHHHHHHTT
T ss_pred ---------------ec-CCc----------------------------------eeeEEEEE-eChhHHHHHHHHHHcC
Confidence 00 110 12467999 9999775443211111
Q ss_pred CCchhcccccccccccceEEEEec--ceEE--ecCCHHHHHHHHHhc
Q 017030 244 ANDFGSEIIPASANEQFLKAYLFN--DYWE--DIGTIRSFFEANLAL 286 (378)
Q Consensus 244 ~~~~~~~~l~~l~~~~~i~~~~~~--~~~~--~i~t~~~~~~a~~~~ 286 (378)
. ..+..+++..++..+.++ +.|. |||||+||.+++..+
T Consensus 157 ~-----~~~~~~l~~~~~~~~~~~~~~~~~~~dintpedl~~~~~~~ 198 (201)
T 2e8b_A 157 D-----YRIWALLKDVGYNEVEIPEELRYTLLNMNTKEDLKRILAIE 198 (201)
T ss_dssp C-----CCHHHHHHHHCCEEEECCGGGGGGGCCSCCC----------
T ss_pred C-----chHHHHHHHCCeEEeccccccchhhcCCCCHHHHHHHHHHh
Confidence 1 122333333456666663 5788 999999999886644
No 50
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.67 E-value=3.8e-16 Score=150.84 Aligned_cols=210 Identities=18% Similarity=0.198 Sum_probs=138.9
Q ss_pred ccceeEEEEcCCCCcccccccccCcccceee---cCeeeeeeeehhhhhh--------cC----CcEEEEEeecChhhHH
Q 017030 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPI---GGAYRLIDVPMSNCIN--------SG----INKVYILTQYNSASLN 70 (378)
Q Consensus 6 ~~~~~avIla~G~g~rl~plt~~~pK~llpi---~g~~pli~~~l~~l~~--------~g----i~~I~iv~~~~~~~i~ 70 (378)
..+|.+||||||.||||+ .+.||+|+|| .|+ |+|+++++.+.+ .| +..+++...+..+.+.
T Consensus 100 ~~kvavViLAGG~GTRLg---~~~PK~l~pv~~~~gk-~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t~e~t~ 175 (505)
T 1jv1_A 100 QNKVAVLLLAGGQGTRLG---VAYPKGMYDVGLPSRK-TLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTK 175 (505)
T ss_dssp TTCEEEEEECCCCCCTTS---CSSCGGGCCCCCTTCC-CHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTTHHHHH
T ss_pred cCceEEEEEcCCccccCC---CCCCCccceeecCCCC-cHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCHHHHH
Confidence 367999999999999996 6799999999 799 999999999776 36 6666666677788899
Q ss_pred HHHHhhccCCCCcccCCc--eEEEec-----cccCCC-------cCCCccccCcHHHHHHHHH--HhcCCCCCCCCeEEE
Q 017030 71 RHLARAYNYGSGVTFGDG--CVEVLA-----ATQTPG-------EAGKRWFQGTADAVRQFHW--LFEDPRNKVIEDVLI 134 (378)
Q Consensus 71 ~~l~~~~~~~~~~~~~~~--~i~i~~-----~~~~~~-------~~~~~~~~Gt~~al~~~~~--~i~~~~~~~~~~~lv 134 (378)
+++.+.. .|+.. .+.++. ....++ ..-...+.|+|+.+..+.. .+++....+.+.|+|
T Consensus 176 ~~f~~~~------~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V 249 (505)
T 1jv1_A 176 EFFTKHK------YFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHV 249 (505)
T ss_dssp HHHHHTG------GGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEE
T ss_pred HHHHhhh------hcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEE
Confidence 9987642 22221 122111 000000 0001236799999876642 111100012489999
Q ss_pred EcCCeE-EecCHHHHHHHHHHcCCcEEEEEee-cCCCCCCcceEEEECCCCC--EEEEEecCCccchhcccccchhcccc
Q 017030 135 LSGDHL-YRMDYMDFVQNHRQSGADITISCLP-MDDSRASDFGLMKINNEGR--VLSFSEKPKGKDLKAMAVDTTVLGLS 210 (378)
Q Consensus 135 ~~gD~~-~~~d~~~~l~~h~~~~~~~ti~~~~-~~~~~~~~~g~v~~d~~~~--v~~~~ek~~~~~~~~~~~~~~~~~~~ 210 (378)
.++|++ ...+...++.+|.++++++++.+.+ ..+ ...+|.+..+ +|+ ++++.|+|..... .. +
T Consensus 250 ~n~Dn~L~~~~d~~~lg~~~~~~~~~~~~v~~k~~~--~e~~Gvl~~~-dg~~~vvEy~E~p~~~~~-~~--~------- 316 (505)
T 1jv1_A 250 YCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNP--TEPVGVVCRV-DGVYQVVEYSEISLATAQ-KR--S------- 316 (505)
T ss_dssp EETTBTTCCTTCHHHHHHHHHTTCSEEEEEEECCST--TCSCCEEEEE-TTEEEEECGGGSCHHHHH-CB--C-------
T ss_pred EECCccccccchHHHHHHHHHcCCCEEEEEEEccCC--ccCcceEEEE-CCeEEEEEEeeCCHHHhh-hc--c-------
Confidence 999995 7777778999999999999999886 433 5778988774 454 4555566643210 00 0
Q ss_pred ccccccCcceeeeeEEEEeHHHHHHHHhh
Q 017030 211 KQEAEEKPYIASMGVYLFKKEILLNLLRW 239 (378)
Q Consensus 211 ~~~~~~~~~~~~~Giy~~~~~~l~~~l~~ 239 (378)
+.. ....+..|+|+|+|+.++|+++.+.
T Consensus 317 ~~g-~~~~~~~N~~~~~f~l~~L~~i~~~ 344 (505)
T 1jv1_A 317 SDG-RLLFNAGNIANHFFTVPFLRDVVNV 344 (505)
T ss_dssp TTS-SBSSCEEEEEEEEEEHHHHHHHHHT
T ss_pred ccc-ccccceeeEEEEEecHHHHHHHHHh
Confidence 000 0123678999999999999887653
No 51
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.63 E-value=7.3e-16 Score=132.60 Aligned_cols=111 Identities=15% Similarity=0.177 Sum_probs=83.5
Q ss_pred ccceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCccc
Q 017030 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (378)
Q Consensus 6 ~~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (378)
|+++.+||||||.|+||+ ..||+|+|++|+ |||+|+++.+.. ++++|+|++++..+.+. + +
T Consensus 4 mm~~~~iILAgG~s~Rmg----~~~K~ll~i~G~-pli~~~l~~l~~-~~~~ivvv~~~~~~~~~----~---------~ 64 (201)
T 1e5k_A 4 MTTITGVVLAGGKARRMG----GVDKGLLELNGK-PLWQHVADALMT-QLSHVVVNANRHQEIYQ----A---------S 64 (201)
T ss_dssp CCSEEEEEECCCCCSSSC----SSCGGGSEETTE-EHHHHHHHHHHH-HCSCEEEECSSSHHHHH----T---------T
T ss_pred CCcceEEEEcCCCCCcCC----CCCCceeeECce-eHHHHHHHHHHh-hCCEEEEEcCCcHHHHh----h---------c
Confidence 457899999999999996 379999999999 999999999984 68999999987653321 1 1
Q ss_pred CCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEecC-HHHHHHH
Q 017030 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQN 151 (378)
Q Consensus 86 ~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~~d-~~~~l~~ 151 (378)
+ +.++...... ..|++++++.+...++ .+.+++++||. ++..+ +..+++.
T Consensus 65 ~---~~~v~~~~~~-------~~G~~~si~~~l~~~~------~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 65 G---LKVIEDSLAD-------YPGPLAGMLSVMQQEA------GEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp S---CCEECCCTTC-------CCSHHHHHHHHHHHCC------SSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred C---CeEEecCCCC-------CCCHHHHHHHHHHhCC------CCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 1 1122211110 1489999999988875 48899999999 66666 6777764
No 52
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.63 E-value=3.7e-16 Score=134.09 Aligned_cols=115 Identities=17% Similarity=0.251 Sum_probs=84.7
Q ss_pred ceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccCC
Q 017030 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (378)
Q Consensus 8 ~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 87 (378)
+|.+||||||.|+||+ .||+|+|++|+ |||+|+++.+..+ +++|++++..+.+.+++. .+
T Consensus 2 ~~~~iIlAgG~g~Rmg-----~~K~l~~i~g~-pll~~~l~~l~~~---~ivvv~~~~~~~~~~~~~----------~~- 61 (197)
T 3d5n_A 2 NIGVIILAAGEGKRFG-----GDKLLAKIDNT-PIIMRTIRIYGDL---EKIIIVGKYVNEMLPLLM----------DQ- 61 (197)
T ss_dssp CEEEEEECSCCTTCCC-----SSGGGSBSSSS-BHHHHHHHHTTTS---BCCEEECTTHHHHGGGCT----------TS-
T ss_pred ceEEEEECCcCcccCC-----CCeeeCEeCce-EHHHHHHHHHHhC---CEEEEECCCHHHHHHHhc----------CC-
Confidence 4789999999999997 49999999999 9999999999887 888888876544433321 11
Q ss_pred ceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEecC-HHHHHHHHHHcCCcE
Q 017030 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQNHRQSGADI 159 (378)
Q Consensus 88 ~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~~d-~~~~l~~h~~~~~~~ 159 (378)
+ ++.... +..|++++++.++..+.. .+.+++++||. +++.+ +..+++.+ +.++++
T Consensus 62 --~-~v~~~~--------~~~G~~~si~~al~~~~~-----~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~ 118 (197)
T 3d5n_A 62 --I-VIYNPF--------WNEGISTSLKLGLRFFKD-----YDAVLVALGDMPFVTKEDVNKIINTF-KPNCKA 118 (197)
T ss_dssp --C-EEECTT--------GGGCHHHHHHHHHHHTTT-----SSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSE
T ss_pred --E-EEECCC--------CCCCHHHHHHHHHHhhcc-----CCcEEEEeCCccccCHHHHHHHHHHh-cCCCcE
Confidence 2 222111 125899999999888853 37899999999 55554 77777766 444443
No 53
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.55 E-value=3.7e-14 Score=122.28 Aligned_cols=115 Identities=17% Similarity=0.255 Sum_probs=83.4
Q ss_pred eeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhhcCCcEEEEEeecChhhHHHHHHhhccCCCCcccCCc
Q 017030 9 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDG 88 (378)
Q Consensus 9 ~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~~~ 88 (378)
|.|||||||.|+||+ .||+|+|++|+ |||+|+++.+..+ +|+|++++ .+.+. .+.+.+ +
T Consensus 1 m~aiILAgG~s~Rmg-----~~K~ll~~~G~-pli~~~~~~l~~~---~vvvv~~~-~~~~~-~~~~~~--------~-- 59 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIG-----MEKTEVMLCGK-KLIEWVLEKYSPF---QTVFVCRD-EKQAE-KLSSRY--------E-- 59 (208)
T ss_dssp CEEEEECCCCCTTTT-----SCGGGCEETTE-EHHHHHHHHHTTS---EEEEECSS-HHHHH-HHHTTS--------C--
T ss_pred CEEEEECCCchhhCC-----CCCcccEECCe-eHHHHHHHHhcCC---CEEEEECC-HHHHH-HHHHhc--------C--
Confidence 689999999999996 79999999999 9999999999886 89888864 33343 332211 1
Q ss_pred eEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEecC-HHHHHHHHHHcCCcEEE
Q 017030 89 CVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQNHRQSGADITI 161 (378)
Q Consensus 89 ~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~~d-~~~~l~~h~~~~~~~ti 161 (378)
+.++..... -.|...+++.++..+ . +.+ +++||+ +.+.+ +..+++.+.+.++++.+
T Consensus 60 -~~~v~d~~~--------~~G~~~si~~gl~~~-~------~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~ 117 (208)
T 3ngw_A 60 -AEFIWDLHK--------GVGSIAGIHAALRHF-G------SCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALI 117 (208)
T ss_dssp -SCEECCTTC--------CCSHHHHHHHHHHHH-S------SEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEE
T ss_pred -CeEEecCCC--------CCChHHHHHHHHHHc-C------CCE-EEECCccCCCHHHHHHHHHHhhcCCCCEEE
Confidence 122322211 137889999998887 3 678 999999 55666 78888877655665443
No 54
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.54 E-value=4.6e-15 Score=138.51 Aligned_cols=197 Identities=15% Similarity=0.152 Sum_probs=125.1
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeecCeeeeeeeehhhhhh-cCCcEEEEEeecChhhHHHHHHhhccCCCCccc
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCIN-SGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~g~~pli~~~l~~l~~-~gi~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (378)
+++.+||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+ .++++|+|+++ ..+.+.+++. +
T Consensus 2 mki~aIILAaG~ssRmg---~~~pK~ll~l~Gk-PLi~~~l~~l~~~~~~~~IvVvt~-~~~~i~~~~~-------~--- 66 (371)
T 1w55_A 2 SEMSLIMLAAGNSTRFN---TKVKKQFLRLGND-PLWLYATKNLSSFYPFKKIVVTSS-NITYMKKFTK-------N--- 66 (371)
T ss_dssp CCEEEEEECCSCCTTTC---SSSCGGGCEEBTE-EHHHHHHHHHHTTSCCSCEEEEES-CHHHHHTTCS-------S---
T ss_pred CccEEEEECCCCCccCC---CCCCcceEEECCe-EHHHHHHHHHHccCCCCeEEEEcC-CHHHHHHHhC-------C---
Confidence 46899999999999997 4579999999999 999999999998 58999999998 4443433221 1
Q ss_pred CCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEecC-HHHHHHHHHHcCCcEEEEE
Q 017030 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQNHRQSGADITISC 163 (378)
Q Consensus 86 ~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~~d-~~~~l~~h~~~~~~~ti~~ 163 (378)
+.++. .. .|..++++.++..+. .+.+++++||. +.+.+ +..+++.+.+. +.++.+
T Consensus 67 ----v~~v~--~g---------~g~~~sv~~aL~~l~------~d~vlv~~~D~Pli~~~~i~~li~~~~~~--~a~i~~ 123 (371)
T 1w55_A 67 ----YEFIE--GG---------DTRAESLKKALELID------SEFVMVSDVARVLVSKNLFDRLIENLDKA--DCITPA 123 (371)
T ss_dssp ----SEEEE--CC---------SSHHHHHHHHHTTCC------SSEEEEEETTCTTCCHHHHHHHHTTGGGC--SEEEEE
T ss_pred ----CEEEe--CC---------CChHHHHHHHHHhcC------CCeEEEEeCCcccCCHHHHHHHHHHHHhc--CCEEEE
Confidence 22221 11 367789998887764 47899999998 55554 78888776544 344444
Q ss_pred eecCCCCCCcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceee-eeEEEEeHHHHHHHHhhhCC
Q 017030 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIAS-MGVYLFKKEILLNLLRWRFP 242 (378)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Giy~~~~~~l~~~l~~~~~ 242 (378)
.+..+. +.. + .+.+... .+.. ..-+.|+.+.+.++++...
T Consensus 124 ~~~~d~-------vk~-----v---~~t~~r~-----------------------~l~~~~~P~~f~~~~l~~~~~~~~- 164 (371)
T 1w55_A 124 LKVADT-------TLF-----D---NEALQRE-----------------------KIKLIQTPQISKTKLLKKALDQNL- 164 (371)
T ss_dssp ECCCSC-------EEE-----T---TEEECGG-----------------------GCCEECSCEEEEHHHHHHHTSSCC-
T ss_pred EEeecC-------eee-----e---eeecCcc-----------------------ceeecCCcceecHHHHHHHHHhcc-
Confidence 444321 000 0 0111100 0111 1235688887766654311
Q ss_pred CCCchhcccccccccccceEEEEecceEEecCCHHHHHHHH
Q 017030 243 TANDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEAN 283 (378)
Q Consensus 243 ~~~~~~~~~l~~l~~~~~i~~~~~~~~~~~i~t~~~~~~a~ 283 (378)
...+ ...++.. .+.++..+..++.|.||+||+||..|+
T Consensus 165 ~~td-~~~ll~~--~g~~V~~v~~~~~~~dIdTpeDL~~Ae 202 (371)
T 1w55_A 165 EFTD-DSTAIAA--MGGKIWFVEGEENARKLTFKEDLKKLD 202 (371)
T ss_dssp CCSS-HHHHHHT--TTCCEEEEECCGGGCCCCSGGGGGGSC
T ss_pred cccC-HHHHHHh--CCCcEEEEECCccccCCCCHHHHHHHH
Confidence 0000 0112211 245677777777899999999999887
No 55
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.50 E-value=7.2e-14 Score=134.50 Aligned_cols=214 Identities=16% Similarity=0.186 Sum_probs=137.5
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeec---Ceeeeeeeehhhhhhc--------C------CcEEEEEeecChhhH
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIG---GAYRLIDVPMSNCINS--------G------INKVYILTQYNSASL 69 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~---g~~pli~~~l~~l~~~--------g------i~~I~iv~~~~~~~i 69 (378)
.++.+||||||.||||. .+.||+|+||+ |+ |+|+++++.+.+. | +..+++..++..+.+
T Consensus 102 gkvavvlLaGG~GTRLg---~~~PK~l~~v~l~~gk-~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t~~~t 177 (486)
T 2yqc_A 102 GEVAVLLMAGGQGTRLG---SSAPKGCFNIELPSQK-SLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNAT 177 (486)
T ss_dssp TCEEEEEEEESBCGGGT---CSSBGGGCBCCCTTCC-BHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGGHHHH
T ss_pred CCeEEEEEcCCccccCC---CCCCCccceecCCCCC-cHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCCHHHH
Confidence 57999999999999995 77899999999 99 9999999999876 6 777777778888889
Q ss_pred HHHHHhhccCCCCcccCCceEEE-----eccccCCC--------cCCCccccCcHHHHHHHHH--HhcCCCCCCCCeEEE
Q 017030 70 NRHLARAYNYGSGVTFGDGCVEV-----LAATQTPG--------EAGKRWFQGTADAVRQFHW--LFEDPRNKVIEDVLI 134 (378)
Q Consensus 70 ~~~l~~~~~~~~~~~~~~~~i~i-----~~~~~~~~--------~~~~~~~~Gt~~al~~~~~--~i~~~~~~~~~~~lv 134 (378)
++++++...++-.. ..+.+ ++....++ ..-...+.|+|+.+..... .+++....+.+.+.+
T Consensus 178 ~~~~~~~~~fgl~~----~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v 253 (486)
T 2yqc_A 178 ESFFIENNYFGLNS----HQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHM 253 (486)
T ss_dssp HHHHHHTGGGGSCG----GGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEE
T ss_pred HHHHhhccccCCCc----ceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEE
Confidence 99997642122111 11211 11100000 0001136799988765532 121111123578888
Q ss_pred EcCCeEEe--cCHHHHHHHHHHcCCcEEEEEeecCCCCCCcceEEEEC-CCC--CEEEEEecCCccchhcccccchhccc
Q 017030 135 LSGDHLYR--MDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKIN-NEG--RVLSFSEKPKGKDLKAMAVDTTVLGL 209 (378)
Q Consensus 135 ~~gD~~~~--~d~~~~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d-~~~--~v~~~~ek~~~~~~~~~~~~~~~~~~ 209 (378)
.+.|.+.. .| ..++.+|.++++++++.+.+...+ ....|.+... .+| +|+++.|+|...... ...+
T Consensus 254 ~~vDN~l~~~~D-p~~lg~~~~~~~~~~~~vv~k~~~-~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~-~~~~------ 324 (486)
T 2yqc_A 254 YCVDNCLVKVAD-PIFIGFAIAKKFDLATKVVRKRDA-NESVGLIVLDQDNQKPCVIEYSEISQELANK-KDPQ------ 324 (486)
T ss_dssp EETTBTTCCTTC-HHHHHHHHHHTCSEEEEEEECCST-TCCCCEEEEETTTTEEEEECGGGSCHHHHHC-EETT------
T ss_pred ECCCCceeeccC-HHHHHHHHHcCCCEEEEEEEcCCC-CCceeEEEEEecCCCEEEEEEecCCHHHhhc-cccc------
Confidence 99998444 34 357889999999999988876432 3567877653 145 478888887532110 0000
Q ss_pred cccccccCcceeeeeEEEEeHHHHHHHHhh
Q 017030 210 SKQEAEEKPYIASMGVYLFKKEILLNLLRW 239 (378)
Q Consensus 210 ~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~ 239 (378)
.+. ....+..|+++|+|+.++|++++++
T Consensus 325 ~~~--~~~~~~~Ni~~~~~~l~~L~~~l~~ 352 (486)
T 2yqc_A 325 DSS--KLFLRAANIVNHYYSVEFLNKMIPK 352 (486)
T ss_dssp EEE--EESSCEEEEEEEEEEHHHHHHHHHH
T ss_pred ccc--cccccceeEEEEEEeHHHHHHHHHh
Confidence 000 0123578999999999999875554
No 56
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.49 E-value=6.1e-15 Score=138.92 Aligned_cols=103 Identities=10% Similarity=0.080 Sum_probs=60.7
Q ss_pred CeEEEEcCCeEEec--CHHHHHHHHHHcCCcEEEEEeecCCCCCCcceEEEECC--CCCEEEEEecCCccchhcccccch
Q 017030 130 EDVLILSGDHLYRM--DYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKINN--EGRVLSFSEKPKGKDLKAMAVDTT 205 (378)
Q Consensus 130 ~~~lv~~gD~~~~~--d~~~~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d~--~~~v~~~~ek~~~~~~~~~~~~~~ 205 (378)
..=|+-.+|.++.. |+.+++++|. +|+.. .+....+|+..+++ ++++ .|.|||+....
T Consensus 11 ~~~~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g----~~~~~~~Gv~~ld~a~~g~I-~F~ekPk~~~~-------- 72 (374)
T 2iu8_A 11 SSGLVPRGSHMSQSTYSLEQLADFLK-----VEFQG----NGATLLSGVEEIEEAKTAHI-TFLDNEKYAKH-------- 72 (374)
T ss_dssp ----------CCSCCEEHHHHHHHTT-----CEEES----CTTCEECEECCTTTCCTTEE-EECCSSSTHHH--------
T ss_pred ccCcccCccccccCcCcHHHHHHhhC-----CEEEC----CCcceEEEEeccccCCCCeE-EEEeCchhhhh--------
Confidence 34567889999986 7999999885 35553 22356788888764 4566 99999974321
Q ss_pred hccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCCCCchhcccccccccccceEEEEecceEEe
Q 017030 206 VLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTANDFGSEIIPASANEQFLKAYLFNDYWED 272 (378)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~i~~~~~~~~~~~ 272 (378)
..+.++|+|+|+++++.++. .+ .+.+| ++...+.++|....+|++
T Consensus 73 ------------~~~~~aGiyI~~~~~l~~~~--------~~-~~~~p-l~~~~~~~a~~~~~~~~~ 117 (374)
T 2iu8_A 73 ------------LKSSEAGAIIISRTQFQKYR--------DL-NKNFL-ITSESPSLVFQKCLELFI 117 (374)
T ss_dssp ------------HHTCCCSEEEEEHHHHHTST--------TS-CSCEE-EESSCHHHHHHHHHTTTS
T ss_pred ------------hhcCCcEEEEeChhHhhhcc--------cc-ccceE-EEeCCHHHHHHHHHHHhc
Confidence 14578999999999874221 12 45666 666555555544455554
No 57
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.49 E-value=1.5e-13 Score=128.02 Aligned_cols=211 Identities=11% Similarity=0.092 Sum_probs=139.6
Q ss_pred ccceeEEEEcCCCCcccccccccCcccceee---cCeeeeeeeehhhhhh-------------cCCcEEEEEeecChhhH
Q 017030 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPI---GGAYRLIDVPMSNCIN-------------SGINKVYILTQYNSASL 69 (378)
Q Consensus 6 ~~~~~avIla~G~g~rl~plt~~~pK~llpi---~g~~pli~~~l~~l~~-------------~gi~~I~iv~~~~~~~i 69 (378)
..++.+|+||||.||||+ .+.||+|+|| .|+ |+++++++.+.+ .++.-+++...+..+.+
T Consensus 33 ~gkvavvlLAGG~GTRLG---~~~PK~~~~Vgl~~gk-s~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS~~t~e~t 108 (405)
T 3oc9_A 33 QGKTALITPAGGQGSRLG---FEHPKGMFVLPFEIPK-SIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTNEETIEEI 108 (405)
T ss_dssp TTCEEEEEECCSBCTTTT---CCSBGGGCEECSSSCE-EHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEECTTTHHHH
T ss_pred cCceEEEEecCCCccccc---CCCCCccccccCCCCC-cHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCccHHHH
Confidence 367899999999999996 6799999999 899 999999988753 46665555557888889
Q ss_pred HHHHHhhccCCCCcccCCceEEEe-----ccccCCC-------cCCCccccCcHHHHHHHHH--HhcCCCCCCCCeEEEE
Q 017030 70 NRHLARAYNYGSGVTFGDGCVEVL-----AATQTPG-------EAGKRWFQGTADAVRQFHW--LFEDPRNKVIEDVLIL 135 (378)
Q Consensus 70 ~~~l~~~~~~~~~~~~~~~~i~i~-----~~~~~~~-------~~~~~~~~Gt~~al~~~~~--~i~~~~~~~~~~~lv~ 135 (378)
++++.++..++-.. ..+.+. +....++ ..-...+.|+|+....... .+++....+.+.+.+.
T Consensus 109 ~~~f~~~~~fGl~~----~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~ 184 (405)
T 3oc9_A 109 NNYFKEHQYFGLSS----EQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAH 184 (405)
T ss_dssp HHHHHHTGGGGSCT----TSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEE
T ss_pred HHHHHhCcccCCCc----cceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEE
Confidence 99997643222110 011111 1000000 0001235688887765432 1221111224799999
Q ss_pred cCCe-EEecCHHHHHHHHHHcCCcEEEEEeecCCCCCCcceEEEE-CCCCCEEEEEecCCccchhcccccchhccccccc
Q 017030 136 SGDH-LYRMDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKI-NNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQE 213 (378)
Q Consensus 136 ~gD~-~~~~d~~~~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~-d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~ 213 (378)
++|. +.......++.+|.++++++++-+.+...+ ....|.+.. |...+|+++.|.|.. . .....++.
T Consensus 185 nvDN~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~~-dek~Gvl~~~dg~~~vvEysei~~e-~-e~~~~~g~-------- 253 (405)
T 3oc9_A 185 NVDNILCKDVDPNMIGYMDLLQSEICIKIVKKGFK-EEKVGVLVKEQERIKVVEYTELTDE-L-NKQLSNGE-------- 253 (405)
T ss_dssp CTTBTTCCSSCHHHHHHHHHTTCSEEEEEEECCST-TCSCCEEEEETTEEEEECGGGCCTT-T-TCBCTTSC--------
T ss_pred eCCCcccccCCHHHHHHHHHcCCCEEEEEEECCCC-CCccceEEEECCeeEEEEEeeCCHH-H-hhcCCCCc--------
Confidence 9999 888888889999999999999999887652 256787764 433478888887765 1 11111110
Q ss_pred cccCcceeeeeEEEEeHHHHHHHH
Q 017030 214 AEEKPYIASMGVYLFKKEILLNLL 237 (378)
Q Consensus 214 ~~~~~~~~~~Giy~~~~~~l~~~l 237 (378)
...+..|+++|+|+.++|+++.
T Consensus 254 --l~fn~~Ni~~h~fs~~fL~~i~ 275 (405)
T 3oc9_A 254 --FIYNCGHISINGYSTSFLEKAA 275 (405)
T ss_dssp --BSSCEEEEEEEEEEHHHHHHHT
T ss_pred --eeeccceeEeeecCHHHHHHhh
Confidence 1235678999999999998776
No 58
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.30 E-value=5.9e-13 Score=117.63 Aligned_cols=115 Identities=15% Similarity=0.126 Sum_probs=73.7
Q ss_pred cccceEEEEecce----EEecCCHHHHHHHHHhcccCC-----------CCcc------ccCCCCcEEccCCCCCCcee-
Q 017030 257 NEQFLKAYLFNDY----WEDIGTIRSFFEANLALTAHP-----------PMFS------FYDATKPIYTSRRNLPPSKI- 314 (378)
Q Consensus 257 ~~~~i~~~~~~~~----~~~i~t~~~~~~a~~~~l~~~-----------~~~~------~~~~~~~i~~~~~i~~~~~i- 314 (378)
...+++++...+| |.|+++ |+++++.++... +... .+.+.+.+.+++.|++++.|
T Consensus 37 ~~~~~~~~~~~~~~~g~w~di~~---~l~~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~I~~~a~I~~~v~Ig~~~~I~ 113 (240)
T 3r8y_A 37 ETVQAFVNKKSGVLFGEWSEIKT---ILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIM 113 (240)
T ss_dssp TTSEEEECSSEEEEEEEHHHHHH---HHHHTTTTEEEEEEEECCBSBCSCBCCCTTCSSEECTTCEEBSSCEECTTCEEC
T ss_pred CcceEEEcCCCeEEEccHHHHHH---HHHhccceechhhhhhhhhhhccchhhccCCCCEECCCCEECCCcEECCCCEEC
Confidence 4456666655555 888877 888888776431 1111 22333444445555555555
Q ss_pred eCcee-eeeEEecCcEEc-ceEEe-eceEcCCCEECCCCEEee---------eeeCCCCeEeeeeee-eeeeE
Q 017030 315 DDSKI-VDSIISHGSFIT-SSFIE-HSVVGIRSRINANVHLKV---------SPANPLCRRIWKCSS-LCSVI 374 (378)
Q Consensus 315 ~~~~i-~~s~Ig~~~~I~-~~~i~-~SiI~~~~~Ig~~~~i~~---------sIi~~~~~~~~~~~~-~~~~~ 374 (378)
.++.| .++.||+||.|+ ++.|. +|+||++|+|++++.|.+ ++|+++|.|+.+|.+ .+++|
T Consensus 114 ~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~~I~~~~~I 186 (240)
T 3r8y_A 114 MNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTV 186 (240)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTCEECTTCEE
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCCEECCCcEE
Confidence 45555 467777777777 67664 788888888888888876 777777777777776 44443
No 59
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.25 E-value=4.4e-13 Score=128.91 Aligned_cols=215 Identities=11% Similarity=-0.004 Sum_probs=128.7
Q ss_pred ccCcHHHHHHHHHHhcCCCCCCCCeEEEEc----CCeEEecCHHHHHHHHHHc--C---------CcEEEEEeecCCCCC
Q 017030 107 FQGTADAVRQFHWLFEDPRNKVIEDVLILS----GDHLYRMDYMDFVQNHRQS--G---------ADITISCLPMDDSRA 171 (378)
Q Consensus 107 ~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~----gD~~~~~d~~~~l~~h~~~--~---------~~~ti~~~~~~~~~~ 171 (378)
+++++++++.+.+.+ .+++|+. +|.....++.+++..|.++ + ...|+.+..+.+.-.
T Consensus 123 pL~~a~~i~~~d~~~--------~~t~V~~~~~kpd~~~~~~l~~l~~~h~~~~~g~~~~~~~ig~~~ti~L~~l~d~li 194 (496)
T 3c8v_A 123 PLHDDEVITIKDSFL--------NKTLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIGSFATVDLSTIHNSVV 194 (496)
T ss_dssp ECSSCCEEEEESCEE--------ESCEEESCCCCTTCTTEEEEESCEECTTCEEESCCEESCEECTTCEEESCEEESCEE
T ss_pred chhHhhhHHhhhhcC--------CceEEeccccCCCCccccchHHHHHHHHHhhcCCcccceEecccceeeHHHHHHHHH
Confidence 467777754432111 1236777 5776666666666666652 2 234455555444212
Q ss_pred CcceEEEECCCCCEEEEEecCCccchhcccccchhccccccccccCcceeeeeEEEEeHHHHHHHHhhhCCCCCchhccc
Q 017030 172 SDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTANDFGSEI 251 (378)
Q Consensus 172 ~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~ 251 (378)
..++.+. .|++..+.++|...-. .+......+|.|.++.+++++...
T Consensus 195 ~~~~~~~---~g~i~~~~~~pg~~~i-------------------~~~~~lnf~Y~f~~~~L~~~l~~~----------- 241 (496)
T 3c8v_A 195 RYFSYVQ---TGELVGKCVEPGQIWI-------------------KSGDELEFHYSFDKAILDKYISQE----------- 241 (496)
T ss_dssp CTTCEEE---SSEEESCEECTTEEEE-------------------ECTTSEEEEEECCHHHHTTTCBCC-----------
T ss_pred HHHhhhc---CCceEEeeecCCceec-------------------ccccccceEEEcCHHHHHHHHhhc-----------
Confidence 4566652 3667777666652100 112235569999998876432111
Q ss_pred ccccccccceEEEEecceEEec--CCHHHHHHHHHhccc----CCCCccccCCCCcEEccCCCCCCcee-eCceeeeeEE
Q 017030 252 IPASANEQFLKAYLFNDYWEDI--GTIRSFFEANLALTA----HPPMFSFYDATKPIYTSRRNLPPSKI-DDSKIVDSII 324 (378)
Q Consensus 252 l~~l~~~~~i~~~~~~~~~~~i--~t~~~~~~a~~~~l~----~~~~~~~~~~~~~i~~~~~i~~~~~i-~~~~i~~s~I 324 (378)
.+.. ..+.|.|+ ..++++.++...... ......++++.+.+...+.|++++.| .++.|.+++|
T Consensus 242 -----~~~n-----~~g~~~Dll~~~~~d~~~i~~~~~~~~~~~I~~~a~I~p~a~i~g~v~IG~~~~I~~~a~I~~v~I 311 (496)
T 3c8v_A 242 -----AGSC-----PTGVLMEFVEVRQEDFEEVFASGHMASGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWM 311 (496)
T ss_dssp -----TTSC-----CBSHHHHHHHTTTHHHHHHHHC--------CCTTCEECTTSEEESSCEECTTCEECTTCEEEEEEE
T ss_pred -----cCcc-----ccceeeehhccchHHHHHHhhccccccCcccCCCcEECCCcEEeCCeEECCCCEECCCcEEeceEe
Confidence 0111 12333333 344555544322111 11122456666666777788888888 5788888888
Q ss_pred ecCcEEc-ceEEeeceEcCCCEECCCCEEeeeeeCCCCeEeeeeeeeee
Q 017030 325 SHGSFIT-SSFIEHSVVGIRSRINANVHLKVSPANPLCRRIWKCSSLCS 372 (378)
Q Consensus 325 g~~~~I~-~~~i~~SiI~~~~~Ig~~~~i~~sIi~~~~~~~~~~~~~~~ 372 (378)
|++|.|+ ++.|.+|+||++|.||+++.|.+++|+++|.|+.+|.+.+.
T Consensus 312 G~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~v~IG~~a~I~~~ 360 (496)
T 3c8v_A 312 GKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGS 360 (496)
T ss_dssp CTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEETCEECTTCEEECC
T ss_pred cCCCEECCCceEeceEeCCCCEECCCcEEcCceECCCcEECCCCEEeCC
Confidence 9999998 88888888888888888888888888888888888887766
No 60
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=98.98 E-value=9e-10 Score=105.34 Aligned_cols=69 Identities=14% Similarity=-0.052 Sum_probs=65.1
Q ss_pred ccCCCCCCceeeCceeeeeEEecCcEEc-ceEEeeceEcCCCEECCCCEEeeeeeCCCCeEeeeeeeeee
Q 017030 304 TSRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKVSPANPLCRRIWKCSSLCS 372 (378)
Q Consensus 304 ~~~~i~~~~~i~~~~i~~s~Ig~~~~I~-~~~i~~SiI~~~~~Ig~~~~i~~sIi~~~~~~~~~~~~~~~ 372 (378)
.++.|+++|.|.++.|.+|+||++|.|+ ++.|.+|+||++|+||+||.|.+|+|++++.|+.++.+.++
T Consensus 323 ~~~~ig~~~~I~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~~~i~~~~~i~~~~ig~~~~i~~~~~i~~~ 392 (420)
T 3brk_X 323 VSSVVSGDCIISGAALNRSLLFTGVRANSYSRLENAVVLPSVKIGRHAQLSNVVIDHGVVIPEGLIVGED 392 (420)
T ss_dssp ESCEECSSCEEESCEEESCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEECTTCEECTTCEESSC
T ss_pred cCCEECCCCEEcCCEEeCcEEcCCCEECCCCEEcceEEcCCCEECCCCEEeceEECCCCEECCCCEEeCC
Confidence 4888999999988899999999999999 99999999999999999999999999999999999988754
No 61
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=98.86 E-value=4.1e-08 Score=93.79 Aligned_cols=338 Identities=12% Similarity=0.103 Sum_probs=174.0
Q ss_pred ccceeEEEEcCCCCcccccccccCcccceeec-Ceeeeeeeehhhhhhc----CCc-EEEEEee-cChhhHHHHHHhhcc
Q 017030 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIG-GAYRLIDVPMSNCINS----GIN-KVYILTQ-YNSASLNRHLARAYN 78 (378)
Q Consensus 6 ~~~~~avIla~G~g~rl~plt~~~pK~llpi~-g~~pli~~~l~~l~~~----gi~-~I~iv~~-~~~~~i~~~l~~~~~ 78 (378)
..++.+|+||||.||||+ ...||.++|+. |+ ++++..++.+.+. |.. ..+|.++ ...+..+++++++..
T Consensus 125 l~kvavvlLaGGlGTRLG---~~~PK~~i~V~sgk-tflql~~eqI~~l~~~~g~~IPl~IMTS~~T~~~T~~~f~k~~~ 200 (528)
T 3r3i_A 125 LNKLVVVKLNGGLGTSMG---CKGPKSLIGVRNEN-TFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNH 200 (528)
T ss_dssp CTTEEEEEECCCBCTTTT---CSSBGGGSEEETTE-EHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHSSCGGGTT
T ss_pred cCceEEEEeCCCCccccC---CCCCccceecCCCC-cHHHHHHHHHHHHHHHhCCCCCEEEEeccchhHHHHHHHHhcCc
Confidence 567899999999999997 77899999997 78 9999999888764 532 4456664 555678888876543
Q ss_pred CCCCccc-CCceEE-EeccccCC-Cc------CC--CccccCcHHHHHHHH--HHhcCCCCCCCCeEEEEcCCeEE-ecC
Q 017030 79 YGSGVTF-GDGCVE-VLAATQTP-GE------AG--KRWFQGTADAVRQFH--WLFEDPRNKVIEDVLILSGDHLY-RMD 144 (378)
Q Consensus 79 ~~~~~~~-~~~~i~-i~~~~~~~-~~------~~--~~~~~Gt~~al~~~~--~~i~~~~~~~~~~~lv~~gD~~~-~~d 144 (378)
++....+ ....+- +.....-. .. .+ .-.|.|.|+...... ..+++....+.+.+.+.+.|.+. ..|
T Consensus 201 fg~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga~vD 280 (528)
T 3r3i_A 201 CRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVD 280 (528)
T ss_dssp SSCCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTCCCC
T ss_pred cCCCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCcccccC
Confidence 3321110 000000 00000000 00 00 112346554333221 22322222346899999999954 344
Q ss_pred HHHHHHHHHHc----CCcEEEEEeecCCCCCCcceEEEECCCCC--EEEEEecCCccchhcccccchhccccccccccCc
Q 017030 145 YMDFVQNHRQS----GADITISCLPMDDSRASDFGLMKINNEGR--VLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKP 218 (378)
Q Consensus 145 ~~~~l~~h~~~----~~~~ti~~~~~~~~~~~~~g~v~~d~~~~--v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (378)
. .++.++..+ ++++.+-+.+...+ ...-|.+.. .+|+ ++++.|-|...... . .. ...-
T Consensus 281 p-~~Lg~~~~~~~~~~~d~~~kVv~Kt~~-dek~Gvl~~-~dGk~~vvEyseip~e~~~~---~---------~g-~~~f 344 (528)
T 3r3i_A 281 L-YILNHLMNPPNGKRCEFVMEVTNKTRA-DVKGGTLTQ-YEGKLRLVEIAQVPKAHVDE---F---------KS-VSKF 344 (528)
T ss_dssp H-HHHHHHSSCSSSCCCSEEEEECCCCTT-CCSSCEEEC-SSSSCEEECTTSSCGGGTTT---S---------SC-SSSC
T ss_pred H-HHHHHHHhcccccCCcEEEEEeEcccc-CCcccEEEE-ECCeEEEEEecCCChhHhhc---c---------CC-cccC
Confidence 3 356666666 78877766654332 223455543 3454 44444444322110 0 00 0122
Q ss_pred ceeeeeEEEEeHHHHHHHHhhhCCCCCch--------h------cccccccccc-cceEEEEec-ceEEecCCHHHHHHH
Q 017030 219 YIASMGVYLFKKEILLNLLRWRFPTANDF--------G------SEIIPASANE-QFLKAYLFN-DYWEDIGTIRSFFEA 282 (378)
Q Consensus 219 ~~~~~Giy~~~~~~l~~~l~~~~~~~~~~--------~------~~~l~~l~~~-~~i~~~~~~-~~~~~i~t~~~~~~a 282 (378)
...|+...+|+-+.++++++.......-+ . +.++-.++.. .+..++..+ ..|..+.+..|++.+
T Consensus 345 ~~~Ntnnlw~~L~~L~~v~~~~~l~Lp~ivn~K~vd~~~~viqlEt~igd~i~~f~~~~~i~VpR~rF~PvKn~sdLll~ 424 (528)
T 3r3i_A 345 KIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLV 424 (528)
T ss_dssp CCCEEEEEEEEHHHHHHHHHTTCCCCCCEEEEECCSSSSCEEEEEBCSTTCSTTSSSCCCEECCGGGCCBCCSHHHHHHH
T ss_pred CeEEEEEEEEEHHHHHHHHHhCCCCCCceecCcccCCCCCEEEeHHHHHHHHHhccCcEEEEEehHHcccccchHHHHHH
Confidence 45789999999999998887631111000 0 0111111110 112233332 348999999999877
Q ss_pred HHhcccCCCCccccCCCC--cEEccCCC---------------CCCcee--eCceee-eeEEecCcEEcceEEeeceEcC
Q 017030 283 NLALTAHPPMFSFYDATK--PIYTSRRN---------------LPPSKI--DDSKIV-DSIISHGSFITSSFIEHSVVGI 342 (378)
Q Consensus 283 ~~~~l~~~~~~~~~~~~~--~i~~~~~i---------------~~~~~i--~~~~i~-~s~Ig~~~~I~~~~i~~SiI~~ 342 (378)
..++-.-..+.-...+.. ..-+...+ ..|..+ +..+|. +...|+|+++.|+.+.-+-=|+
T Consensus 425 ~Sdly~l~~g~l~~~~~r~~~~~P~v~L~~~~~~v~~f~~rf~~iP~l~~~~~LtV~Gdv~fg~~v~l~G~v~i~~~~g~ 504 (528)
T 3r3i_A 425 MSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGD 504 (528)
T ss_dssp HSTTSEEETTEEECCSSCSSCCCCEEEECTTSCSHHHHHHHCSSCCEEEEEEEEEEESEEECCTTCEEEEEEEEECCTTC
T ss_pred hcceeEeeCCeEEecccccCCCCCEEEeCcccCcHHHHHHhCCCCCCcccCCEEEEecceEECCCcEEEEEEEEEcCCCC
Confidence 655422111100001110 00011111 122222 233333 6778999998864333222256
Q ss_pred CCEECCCCEEeeeeeCCCCeE
Q 017030 343 RSRINANVHLKVSPANPLCRR 363 (378)
Q Consensus 343 ~~~Ig~~~~i~~sIi~~~~~~ 363 (378)
..+|-+|+.++|.+|..+..|
T Consensus 505 ~~~ip~g~~len~~v~g~~~~ 525 (528)
T 3r3i_A 505 RIDIPPGAVLENKIVSGNLRI 525 (528)
T ss_dssp EEECCTTCEEEEEEEC-----
T ss_pred ceecCCCCEEeccEEeccccc
Confidence 678999999999998876655
No 62
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=98.85 E-value=4.8e-09 Score=87.51 Aligned_cols=77 Identities=13% Similarity=-0.029 Sum_probs=60.6
Q ss_pred ccCCCCcEEccCCCCCCcee-eCceeee----eEEecCcEEc-ceEEe-----eceEcCCCEECCCCEEeeeeeCCCCeE
Q 017030 295 FYDATKPIYTSRRNLPPSKI-DDSKIVD----SIISHGSFIT-SSFIE-----HSVVGIRSRINANVHLKVSPANPLCRR 363 (378)
Q Consensus 295 ~~~~~~~i~~~~~i~~~~~i-~~~~i~~----s~Ig~~~~I~-~~~i~-----~SiI~~~~~Ig~~~~i~~sIi~~~~~~ 363 (378)
++++.+.+...+.|++++.| .++.|.. +.||++|.|+ ++.|. +++||++|.|++++.|.+++|++++.|
T Consensus 20 ~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~I 99 (173)
T 1xhd_A 20 FIADYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILHSCHIKKDALI 99 (173)
T ss_dssp EECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEESCEECTTCEE
T ss_pred EECCCCEEECCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEeCCEECCCCEE
Confidence 45556666666777777777 5677764 7889999998 78887 788999999999898888888888888
Q ss_pred eeeeeeee
Q 017030 364 IWKCSSLC 371 (378)
Q Consensus 364 ~~~~~~~~ 371 (378)
+.+|.+..
T Consensus 100 g~~~~i~~ 107 (173)
T 1xhd_A 100 GMGSIILD 107 (173)
T ss_dssp CTTCEECT
T ss_pred cCCCEEcC
Confidence 88887653
No 63
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=98.79 E-value=8.1e-09 Score=87.58 Aligned_cols=77 Identities=12% Similarity=0.046 Sum_probs=53.3
Q ss_pred ccCCCCcEEccCCCCCCcee-eCceee----eeEEecCcEEc-ceEEe------eceEcCCCEECCCCEEeeeeeCCCCe
Q 017030 295 FYDATKPIYTSRRNLPPSKI-DDSKIV----DSIISHGSFIT-SSFIE------HSVVGIRSRINANVHLKVSPANPLCR 362 (378)
Q Consensus 295 ~~~~~~~i~~~~~i~~~~~i-~~~~i~----~s~Ig~~~~I~-~~~i~------~SiI~~~~~Ig~~~~i~~sIi~~~~~ 362 (378)
.+.+.+.+..++.|++++.| .++.|. ++.||++|.|+ ++.|. +++||++|.||+++.|.+++|+++|.
T Consensus 41 ~I~~~~~i~~~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i~~~~Ig~~~~ 120 (191)
T 3ixc_A 41 FIAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCILHACTLGNNAF 120 (191)
T ss_dssp EECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTTCEECSCEECTTCE
T ss_pred EECCCCEEeCCcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEEECCEECCCCE
Confidence 34445555555666666666 456664 33778888887 77776 78888888888888888777777777
Q ss_pred Eeeeeeeee
Q 017030 363 RIWKCSSLC 371 (378)
Q Consensus 363 ~~~~~~~~~ 371 (378)
|+.+|.+..
T Consensus 121 Ig~~~~I~~ 129 (191)
T 3ixc_A 121 VGMGSIVMD 129 (191)
T ss_dssp ECTTCEECT
T ss_pred ECCCCEEeC
Confidence 777776653
No 64
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=98.77 E-value=1.1e-08 Score=85.37 Aligned_cols=76 Identities=11% Similarity=0.020 Sum_probs=57.6
Q ss_pred ccCCCCcEEccCCCCCCcee-eCceeee----eEEecCcEEc-ceEEe-----eceEcCCCEECCCCEEeeeeeCCCCeE
Q 017030 295 FYDATKPIYTSRRNLPPSKI-DDSKIVD----SIISHGSFIT-SSFIE-----HSVVGIRSRINANVHLKVSPANPLCRR 363 (378)
Q Consensus 295 ~~~~~~~i~~~~~i~~~~~i-~~~~i~~----s~Ig~~~~I~-~~~i~-----~SiI~~~~~Ig~~~~i~~sIi~~~~~~ 363 (378)
++++.+.+..++.+++++.| .++.+.. +.||++|.|+ ++.|. +++||+++.|++++.|.+++|++++.|
T Consensus 18 ~I~~~a~i~g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~~~I 97 (173)
T 1v3w_A 18 FVDENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNYVII 97 (173)
T ss_dssp EECTTSEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECSSEEE
T ss_pred EECCCCEEeCCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECCCCEE
Confidence 45556666666677777777 5666654 7888888888 78887 588888888888888888888888888
Q ss_pred eeeeeee
Q 017030 364 IWKCSSL 370 (378)
Q Consensus 364 ~~~~~~~ 370 (378)
+.+|.+.
T Consensus 98 g~~~~i~ 104 (173)
T 1v3w_A 98 GISSVIL 104 (173)
T ss_dssp CTTCEEC
T ss_pred CCCCEEe
Confidence 8777754
No 65
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=98.74 E-value=1.4e-08 Score=85.79 Aligned_cols=76 Identities=14% Similarity=0.036 Sum_probs=56.3
Q ss_pred ccCCCCcEEccCCCCCCcee-eCceee----eeEEecCcEEc-ceEE------------eeceEcCCCEECCCCEEeeee
Q 017030 295 FYDATKPIYTSRRNLPPSKI-DDSKIV----DSIISHGSFIT-SSFI------------EHSVVGIRSRINANVHLKVSP 356 (378)
Q Consensus 295 ~~~~~~~i~~~~~i~~~~~i-~~~~i~----~s~Ig~~~~I~-~~~i------------~~SiI~~~~~Ig~~~~i~~sI 356 (378)
++++.+.+..++.|++++.| .++.|. ++.||+||.|+ ++.| .+++||++|.||.++.|.+++
T Consensus 23 ~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~ 102 (187)
T 3r3r_A 23 MIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHGCT 102 (187)
T ss_dssp EECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCEECTTCEEESCE
T ss_pred EECCCCEEECceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECCCCEECCCCEEeCcE
Confidence 44555666666677777777 466665 24788888888 7777 678888888888888888888
Q ss_pred eCCCCeEeeeeeee
Q 017030 357 ANPLCRRIWKCSSL 370 (378)
Q Consensus 357 i~~~~~~~~~~~~~ 370 (378)
|++++.|+.+|.+.
T Consensus 103 Ig~~~~Ig~~~~I~ 116 (187)
T 3r3r_A 103 IGNRVLVGMGSIVL 116 (187)
T ss_dssp ECSSEEECTTCEEC
T ss_pred ECCCCEECCCCEEC
Confidence 88888888777774
No 66
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=98.74 E-value=3.7e-08 Score=83.67 Aligned_cols=101 Identities=16% Similarity=0.107 Sum_probs=64.1
Q ss_pred eEEecCCHHHHHHHHHhcccCC-CCccccCCCCcEEccCCCC--CCcee-eCceee-eeEEecCcEEc-ceEEe-eceEc
Q 017030 269 YWEDIGTIRSFFEANLALTAHP-PMFSFYDATKPIYTSRRNL--PPSKI-DDSKIV-DSIISHGSFIT-SSFIE-HSVVG 341 (378)
Q Consensus 269 ~~~~i~t~~~~~~a~~~~l~~~-~~~~~~~~~~~i~~~~~i~--~~~~i-~~~~i~-~s~Ig~~~~I~-~~~i~-~SiI~ 341 (378)
++.-++++....+..+.+.+.. ....++++.+.+.+++.++ +++.| .++.|. ++.||+||.|+ ++.|. ++.||
T Consensus 50 ~~iaig~~~~r~~~~~~l~~~~~~~~~~i~~~a~i~~~~~Ig~~~g~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig 129 (194)
T 3bfp_A 50 FFIAIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIG 129 (194)
T ss_dssp EEECCCCHHHHHHHHHHHHTTTCCBCCEECTTCEECTTCEECTTSCCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCccccccCCeEEECCCceeCCCCCcEEcCCCEECCCCEECCCCEECCCCEEcCCCEEC
Confidence 4567888877777766665432 1224566667777777777 77777 455553 56677777776 66664 56666
Q ss_pred CCCEECCCCEEee-eeeCCCCeEeeeeee
Q 017030 342 IRSRINANVHLKV-SPANPLCRRIWKCSS 369 (378)
Q Consensus 342 ~~~~Ig~~~~i~~-sIi~~~~~~~~~~~~ 369 (378)
++|+|++++.|.+ ++|++++.|+.+|.+
T Consensus 130 ~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~i 158 (194)
T 3bfp_A 130 EFSHVSVGAKCAGNVKIGKNCFLGINSCV 158 (194)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CCCEECCCCEECCCcEECCCCEEcCCCEE
Confidence 6666666666666 666666666665554
No 67
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=98.71 E-value=5.3e-08 Score=84.02 Aligned_cols=50 Identities=14% Similarity=0.046 Sum_probs=32.5
Q ss_pred eEEecCcEEc-ceEEee-ceEcCCCEECCCCEEeeeeeCCCCeEeeeeeeee
Q 017030 322 SIISHGSFIT-SSFIEH-SVVGIRSRINANVHLKVSPANPLCRRIWKCSSLC 371 (378)
Q Consensus 322 s~Ig~~~~I~-~~~i~~-SiI~~~~~Ig~~~~i~~sIi~~~~~~~~~~~~~~ 371 (378)
+.||++|.|+ ++.|.. ++||++|.||.++.|.+++|++++.|+.++.+.+
T Consensus 112 ~~IG~~v~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~~~Ig~~~~Igags~V~~ 163 (213)
T 3kwd_A 112 VWIGDNVSITHMALIHGPAYIGDGCFIGFRSTVFNARVGAGCVVMMHVLIQD 163 (213)
T ss_dssp EEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEES
T ss_pred eEECCCcEECCCcEEcCCCEECCCCEECCCCEEeCcEECCCCEEcCCCEECC
Confidence 5666666666 566655 6666666666666666666666666666666643
No 68
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=98.70 E-value=1.2e-06 Score=83.08 Aligned_cols=334 Identities=10% Similarity=0.040 Sum_probs=177.2
Q ss_pred cceeEEEEcCCCCcccccccccCcccceee-cCeeeeeeeehhhhhh----cCCc-EEEEEeec-ChhhHHHHHHhhccC
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPI-GGAYRLIDVPMSNCIN----SGIN-KVYILTQY-NSASLNRHLARAYNY 79 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi-~g~~pli~~~l~~l~~----~gi~-~I~iv~~~-~~~~i~~~l~~~~~~ 79 (378)
.++.+|+||||.||||+ ...||.++|+ .|+ ++++..++++.+ .|.. -.+|.++. ..+..+++++++..+
T Consensus 75 ~kvavvlLaGGlGTRLG---~~~pKg~~~v~sgk-sflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k~~~F 150 (484)
T 3gue_A 75 RQAVVLKLNGGLGTGMG---LNGPKSLLQVKNGQ-TFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKYPTL 150 (484)
T ss_dssp TTEEEEEEECCCCGGGT---CSSCGGGSEEETTE-EHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGGCHHH
T ss_pred hhcEEEEEcCCcccccC---CCCCceeeecCCCC-cHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHhCccc
Confidence 47888999999999997 7789999999 667 899998887765 3432 45666754 456788888764322
Q ss_pred CC---C-cccCCceEEEeccccC-----CCcCC-CccccCcHHHHHHHH--HHhcCCCCCCCCeEEEEcCCeEEecCHHH
Q 017030 80 GS---G-VTFGDGCVEVLAATQT-----PGEAG-KRWFQGTADAVRQFH--WLFEDPRNKVIEDVLILSGDHLYRMDYMD 147 (378)
Q Consensus 80 ~~---~-~~~~~~~i~i~~~~~~-----~~~~~-~~~~~Gt~~al~~~~--~~i~~~~~~~~~~~lv~~gD~~~~~d~~~ 147 (378)
+- . .-|....+-.+..... +.... .-.+.|.|+...... ..+++....+.+.+.+.+.|.+...---.
T Consensus 151 gl~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp~ 230 (484)
T 3gue_A 151 YEVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDVR 230 (484)
T ss_dssp HTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCHH
T ss_pred CCCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCHH
Confidence 21 1 1111111111111000 00000 122346665443321 22222222346899999999955432346
Q ss_pred HHHHHHHcCCcEEEEEeecCCCCCCcceEEEEC---------CCCC--EEEEEecCCccchhcccccchhcccccccccc
Q 017030 148 FVQNHRQSGADITISCLPMDDSRASDFGLMKIN---------NEGR--VLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEE 216 (378)
Q Consensus 148 ~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d---------~~~~--v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (378)
++.++.++++++.+-+.+...+ ...-|.+... .+|+ ++++.|-|..... .+.. ..
T Consensus 231 ~lG~~~~~~~d~~~kvv~Kt~~-dekgG~l~~~~~~~~~~~~~dG~~~vvEyseip~e~~~-~f~~------------~~ 296 (484)
T 3gue_A 231 LLDYMHEKQLGFLMEVCRRTES-DKKGGHLAYKDVIDETTGQTRRRFVLRESAQCPKEDED-SFQN------------IA 296 (484)
T ss_dssp HHHHHHHTTCSEEEEEEECCTT-CCSSEEEEEEC--------CCCEEEEEEGGGSCGGGHH-HHTC------------TT
T ss_pred HHHHHHhcCCCEEEEEEECCCC-CCceeEEEEEccccccccCCCCCEEEEEeccCCHHHHh-hhcC------------CC
Confidence 7888889999998888776542 2334543331 2454 4444454433211 0000 01
Q ss_pred CcceeeeeEEEEeHHHHHHHHhhhC--CCCC-------------ch-----hccccccccc-ccceEEEEec-ceEEecC
Q 017030 217 KPYIASMGVYLFKKEILLNLLRWRF--PTAN-------------DF-----GSEIIPASAN-EQFLKAYLFN-DYWEDIG 274 (378)
Q Consensus 217 ~~~~~~~Giy~~~~~~l~~~l~~~~--~~~~-------------~~-----~~~~l~~l~~-~~~i~~~~~~-~~~~~i~ 274 (378)
.....+++..++.-..+.++++... .... +. .+.++-+++. -.+..++..+ ..|..+.
T Consensus 297 g~~~FNtnNi~~~l~~l~~~l~~~~g~~~Lp~~vn~K~id~~k~~~~~~iqlE~~~~d~~~~~~~~~~ieV~R~rF~PvK 376 (484)
T 3gue_A 297 KHCFFNTNNIWINLMELKKMMDEQLGVLRLPVMRNPKTVNPQDSQSTKVYQLEVAMGAAISLFDRSEAVVVPRERFAPVK 376 (484)
T ss_dssp TSCEEEEEEEEEEHHHHHHHHHHTTTCCCCCCEEEEEESSTTCTTSCEEEEEECCGGGGGTTSSSEEEEECCGGGCCCCS
T ss_pred CceEeEeeeEEEEHHHHHHHHHhccCcCCCCcEeccceecCCCCCCCCEeehHHHHHHHHHhCCccEEEEEChhhccccc
Confidence 1234589999999988877877631 1000 00 0111111111 1234444443 4588899
Q ss_pred CHHHHHHHHHhcccCCCCcccc-CCC-CcEEccCCCCC-----------------Ccee--eCceee-eeEEecCcEEcc
Q 017030 275 TIRSFFEANLALTAHPPMFSFY-DAT-KPIYTSRRNLP-----------------PSKI--DDSKIV-DSIISHGSFITS 332 (378)
Q Consensus 275 t~~~~~~a~~~~l~~~~~~~~~-~~~-~~i~~~~~i~~-----------------~~~i--~~~~i~-~s~Ig~~~~I~~ 332 (378)
+..|++.+..++-.-..+..+. .+. ....+...+++ |+.+ ...+|. +...|+|+++.|
T Consensus 377 n~sdLl~~~Sdly~l~~~~~l~~~~~~~~~~P~v~L~~~~~~~v~~f~~rf~~giPsl~~~~~L~V~Gdv~fg~~v~l~G 456 (484)
T 3gue_A 377 TCSDLLALRSDAYQVTEDQRLVLCEERNGKPPAIDLDGEHYKMIDGFEKLVKGGVPSLRQCTSLTVRGLVEFGADVSVRG 456 (484)
T ss_dssp SHHHHHHHHSTTEEECTTSCEEECGGGTTCCCEEEECTTTSSSHHHHHHHHTTCCCBCTTEEEEEEESSEEECTTCEEEE
T ss_pred cchHHHHHhhhceeccCCceEEeccccCCCCCeEEECchhcCcHHHHHHhcCCCCCChhhCCEEEEecceEECCCcEEEE
Confidence 9999988876653222110110 000 00001111111 2222 122332 667888888886
Q ss_pred eEEeeceEcCCCEECCCCEEeeeeeC
Q 017030 333 SFIEHSVVGIRSRINANVHLKVSPAN 358 (378)
Q Consensus 333 ~~i~~SiI~~~~~Ig~~~~i~~sIi~ 358 (378)
+.+..+-=|...+|-+|+.++|.++.
T Consensus 457 ~v~i~~~~g~~~~ip~g~~l~~~~~~ 482 (484)
T 3gue_A 457 NVVIKNLKEEPLIIGSGRVLDNEVVV 482 (484)
T ss_dssp EEEEEECSSSCEEECTTCEEESCEEE
T ss_pred EEEEEcCCCCeeecCCCCEecceecC
Confidence 54443333566788888888887764
No 69
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=98.68 E-value=2.7e-08 Score=91.26 Aligned_cols=44 Identities=25% Similarity=0.163 Sum_probs=19.4
Q ss_pred CcEEccCCCCCCcee-eCceeeeeEEecCcEEc-ceEEeeceEcCC
Q 017030 300 KPIYTSRRNLPPSKI-DDSKIVDSIISHGSFIT-SSFIEHSVVGIR 343 (378)
Q Consensus 300 ~~i~~~~~i~~~~~i-~~~~i~~s~Ig~~~~I~-~~~i~~SiI~~~ 343 (378)
..+.+.+.|++++.| +++.|.||+|++||.|+ ++.|.+|+|+++
T Consensus 78 ~~I~g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~ 123 (334)
T 2pig_A 78 ARITQPCTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREE 123 (334)
T ss_dssp CEEESSCEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESS
T ss_pred cEEeeeeeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCC
Confidence 333333333334443 34444455555555554 444444443333
No 70
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=98.68 E-value=5.4e-08 Score=90.60 Aligned_cols=46 Identities=11% Similarity=-0.113 Sum_probs=24.1
Q ss_pred eEEecCCHHHHHHHHHhcccCCCCccccCCCCcEEccCCCCCCcee
Q 017030 269 YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPSKI 314 (378)
Q Consensus 269 ~~~~i~t~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~i~~~~~i 314 (378)
.|.-+.+|...+.....++...+....+++.+.+.+++.++++++|
T Consensus 78 ~~i~~~~p~~~~~~~~~~~~~~~~~~~i~p~a~I~~~a~ig~~~~I 123 (357)
T 4e79_A 78 NFIIVDNPYLAFAILTHVFDKKISSTGIESTARIHPSAVISETAYI 123 (357)
T ss_dssp EEEECSCHHHHHHHHHTTSSCCCCCCEECTTCEECTTCEECTTCEE
T ss_pred cEEEECCHHHHHHHHHHHhccccccCeeCCCCEECCCCEECCCCEE
Confidence 3556777776555544454443222445555555555555544444
No 71
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=98.67 E-value=2.9e-08 Score=83.92 Aligned_cols=76 Identities=13% Similarity=0.043 Sum_probs=52.2
Q ss_pred ccCCCCcEEccCCCCCCcee-eCceee----eeEEecCcEEc-ceEEeec------------eEcCCCEECCCCEEeeee
Q 017030 295 FYDATKPIYTSRRNLPPSKI-DDSKIV----DSIISHGSFIT-SSFIEHS------------VVGIRSRINANVHLKVSP 356 (378)
Q Consensus 295 ~~~~~~~i~~~~~i~~~~~i-~~~~i~----~s~Ig~~~~I~-~~~i~~S------------iI~~~~~Ig~~~~i~~sI 356 (378)
++.+.+.+..++.|++++.| .++.|. ++.||++|.|+ ++.|..+ +||++|.||.++.|.+++
T Consensus 27 ~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~ 106 (189)
T 3r1w_A 27 FVDRSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQAMLHGCT 106 (189)
T ss_dssp EECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECTTCEEESCE
T ss_pred EECCCCEEeeeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECCCCEEeCcE
Confidence 34455555566666666666 456664 24778888887 7777655 778888777777777777
Q ss_pred eCCCCeEeeeeeee
Q 017030 357 ANPLCRRIWKCSSL 370 (378)
Q Consensus 357 i~~~~~~~~~~~~~ 370 (378)
|++++.|+.+|.+.
T Consensus 107 Ig~~~~Ig~~~~i~ 120 (189)
T 3r1w_A 107 IGNRVLIGMKSMIM 120 (189)
T ss_dssp ECSSEEECTTCEEC
T ss_pred ECCCcEECCCCEEc
Confidence 77777777777764
No 72
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=98.64 E-value=9.7e-08 Score=88.42 Aligned_cols=99 Identities=13% Similarity=0.062 Sum_probs=54.2
Q ss_pred EecCCHHHHHHHHHhcccCC-CCccccCCCCcEEccCCCCCCcee-eCceee-eeEEecCcEEc-ceEE-eeceEcCCCE
Q 017030 271 EDIGTIRSFFEANLALTAHP-PMFSFYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVGIRSR 345 (378)
Q Consensus 271 ~~i~t~~~~~~a~~~~l~~~-~~~~~~~~~~~i~~~~~i~~~~~i-~~~~i~-~s~Ig~~~~I~-~~~i-~~SiI~~~~~ 345 (378)
.-+.+|...+.....++... .....+++.+.+.+++.++++++| .++.|. ++.||+||.|+ ++.| .++.||++|+
T Consensus 74 ~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~a~i~~~a~ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~~~IG~~~~ 153 (341)
T 3eh0_A 74 LVVKNPYLTYARMAQILDTTPQPAQNIAPSAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSR 153 (341)
T ss_dssp EECSCHHHHHHHHHHHHCCCCCSCCSBCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCE
T ss_pred EEeCCHHHHHHHHHHHhcccCCccCccCCCcEECCCcEECCCCEECCCcEECCCcEECCCcEECCCcEECCCCEECCCcE
Confidence 44677776555444444332 233456666666666666666666 344443 45555555555 4555 5555555555
Q ss_pred ECCCCEE-eeeeeCCCCeEeeeeee
Q 017030 346 INANVHL-KVSPANPLCRRIWKCSS 369 (378)
Q Consensus 346 Ig~~~~i-~~sIi~~~~~~~~~~~~ 369 (378)
|++++.| .+++|++++.|+.+|.+
T Consensus 154 I~~~~~I~~~~~IG~~~~I~~g~~I 178 (341)
T 3eh0_A 154 LWANVTIYHEIQIGQNCLIQSGTVV 178 (341)
T ss_dssp ECSSCEECTTCEECSSCEECTTCEE
T ss_pred ECCCcEECCCCEECCccEEcCCcEE
Confidence 5555555 34555555555555544
No 73
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=98.64 E-value=3.4e-08 Score=86.85 Aligned_cols=74 Identities=14% Similarity=0.018 Sum_probs=57.7
Q ss_pred CcEEccCCCCCCceee-Cceee-eeEEecCcEEc-ceEEee---------ceEcCCCEECCCCEE-eeeeeCCCCeEeee
Q 017030 300 KPIYTSRRNLPPSKID-DSKIV-DSIISHGSFIT-SSFIEH---------SVVGIRSRINANVHL-KVSPANPLCRRIWK 366 (378)
Q Consensus 300 ~~i~~~~~i~~~~~i~-~~~i~-~s~Ig~~~~I~-~~~i~~---------SiI~~~~~Ig~~~~i-~~sIi~~~~~~~~~ 366 (378)
+.|...+.|+++|.|+ ++.|. +|+||++|.|+ ++.+.+ ++|+++|.||.+|.| .++.|+++++|+.+
T Consensus 116 s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~~I~~~~~Ig~~~~I~~g 195 (240)
T 3r8y_A 116 ATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAG 195 (240)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred CEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCCEECCCcEECCCCEECCC
Confidence 3333445555555553 55554 78999999999 888887 999999999999999 88999999999998
Q ss_pred eeeeeee
Q 017030 367 CSSLCSV 373 (378)
Q Consensus 367 ~~~~~~~ 373 (378)
+.+..+|
T Consensus 196 svV~~~v 202 (240)
T 3r8y_A 196 AVVTEDV 202 (240)
T ss_dssp CEECSCB
T ss_pred CEECCCc
Confidence 8886543
No 74
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=98.64 E-value=5e-08 Score=94.13 Aligned_cols=80 Identities=18% Similarity=0.060 Sum_probs=67.9
Q ss_pred ccCCCCcEEccCCCCCCcee-eCceeeeeEEecCcEEc-ceEEeeceEcCCCEECCCCEEe-eeeeCCCCeEeeeeeeee
Q 017030 295 FYDATKPIYTSRRNLPPSKI-DDSKIVDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLK-VSPANPLCRRIWKCSSLC 371 (378)
Q Consensus 295 ~~~~~~~i~~~~~i~~~~~i-~~~~i~~s~Ig~~~~I~-~~~i~~SiI~~~~~Ig~~~~i~-~sIi~~~~~~~~~~~~~~ 371 (378)
.+.+.+.+.+++.|++++.| .++.|.++.||+||.|+ ++.|.+++||++|.||+++.|. +++|+++++|+++|.+..
T Consensus 273 ~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~~~ig~~~~i~~ 352 (456)
T 2v0h_A 273 EIDVNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIKK 352 (456)
T ss_dssp EECSSEEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTTCEECSSEEECTTCEECTTCEEEEEEEEES
T ss_pred EEcCCcEEcCCcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCCCEECCCCEECCCCEEec
Confidence 45556666677788888888 68889999999999999 8999999999999999999998 699999999999888765
Q ss_pred eeE
Q 017030 372 SVI 374 (378)
Q Consensus 372 ~~~ 374 (378)
+++
T Consensus 353 ~~i 355 (456)
T 2v0h_A 353 STV 355 (456)
T ss_dssp CEE
T ss_pred cEE
Confidence 443
No 75
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=98.62 E-value=5.1e-08 Score=89.37 Aligned_cols=69 Identities=16% Similarity=0.237 Sum_probs=55.0
Q ss_pred cCCCCCCcee-eCceee-eeEEecCcEEc-ceEEeeceEcCCCEECCCCEEeeeeeCCCCeEeeeeeeeeee
Q 017030 305 SRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKVSPANPLCRRIWKCSSLCSV 373 (378)
Q Consensus 305 ~~~i~~~~~i-~~~~i~-~s~Ig~~~~I~-~~~i~~SiI~~~~~Ig~~~~i~~sIi~~~~~~~~~~~~~~~~ 373 (378)
.+.+++.++| +++.|. ++.||+||+|+ ++.|.||+|+++|+|+++++|.+++|++++.|.+++.+...+
T Consensus 65 ~a~I~~~a~I~~~~~I~g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s 136 (334)
T 2pig_A 65 NAMAFAGTEITGNARITQPCTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREECAIYGDARVLNQS 136 (334)
T ss_dssp TCEEETTCEECTTCEEESSCEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESSEEECTTCEEESSC
T ss_pred CeEEcCCcEECCCcEEeeeeeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCE
Confidence 4455555555 455554 68899999999 899999999999999999999999998888887777655443
No 76
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=98.61 E-value=2.5e-08 Score=85.51 Aligned_cols=57 Identities=14% Similarity=0.012 Sum_probs=33.5
Q ss_pred cCCCCcEEc--cCCCCCCcee-eCceee-eeEEecCcEEc-ceEE----eeceEcCCCEECCCCEE
Q 017030 296 YDATKPIYT--SRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI----EHSVVGIRSRINANVHL 352 (378)
Q Consensus 296 ~~~~~~i~~--~~~i~~~~~i-~~~~i~-~s~Ig~~~~I~-~~~i----~~SiI~~~~~Ig~~~~i 352 (378)
+.+.+.+.. +..|++++.| .++.|. ++.||++|.|+ ++.| .+++||++|.|+++|.|
T Consensus 41 I~~~~~i~~~~~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I 106 (205)
T 3vbi_A 41 ISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIV 106 (205)
T ss_dssp EBTTSEEESGGGEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEE
T ss_pred ECCCeEEccCCeeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEE
Confidence 344444444 4555566666 455554 56666666666 5666 33666666666666666
No 77
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=98.61 E-value=6.3e-08 Score=86.63 Aligned_cols=54 Identities=19% Similarity=0.130 Sum_probs=22.7
Q ss_pred CCcEEccCCCCCCcee-eCceee-eeEEecCcEEc-ceEEe-eceEcCCCEECCCCEE
Q 017030 299 TKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHL 352 (378)
Q Consensus 299 ~~~i~~~~~i~~~~~i-~~~~i~-~s~Ig~~~~I~-~~~i~-~SiI~~~~~Ig~~~~i 352 (378)
.+.+.+.+.|++++.| ..+.|. ++.||++|.|+ ++.|. ++.||++|+|+++|.|
T Consensus 7 ~a~I~~~a~Ig~~~~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~I 64 (270)
T 1j2z_A 7 TAIISPKAEINKGVEIGEFCVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVL 64 (270)
T ss_dssp TCEECTTSEECTTCEECTTCEECTTCEECTTCEECTTCEECSEEEECTTCEECTTCEE
T ss_pred CCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEE
Confidence 3333333334444433 233332 44444444444 44444 4444444444444444
No 78
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=98.61 E-value=1.1e-07 Score=88.95 Aligned_cols=96 Identities=17% Similarity=0.043 Sum_probs=49.9
Q ss_pred EEecCCHHHHHHHHHhcccCCC-CccccCCCCcEEccCCCCCCcee-eCceee-eeEEecCcEEcceEEeeceEcCCCEE
Q 017030 270 WEDIGTIRSFFEANLALTAHPP-MFSFYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFITSSFIEHSVVGIRSRI 346 (378)
Q Consensus 270 ~~~i~t~~~~~~a~~~~l~~~~-~~~~~~~~~~i~~~~~i~~~~~i-~~~~i~-~s~Ig~~~~I~~~~i~~SiI~~~~~I 346 (378)
+.-+.+|...+.....++...+ ....+++.+.+.+++.|+++++| .++.|. ++.||+||.|+ .+|+|+++++|
T Consensus 95 ~l~~~~p~~~~~~~~~~~~~~~~~~~~i~p~a~i~~~a~Ig~~~~I~~~~~I~~~v~IG~~~~I~----~~~~Ig~~v~I 170 (372)
T 3pmo_A 95 ALVVANPYLAYASLSHLFDRKPKAAAGIHPTAIVAADAEVDPSASVGAYAVIESGARIGAGVSIG----AHCVIGARSVI 170 (372)
T ss_dssp EEECSCHHHHHHHHHGGGCCCCCCCSEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEEC----TTCEECTTCEE
T ss_pred EEEECCHHHHHHHHHHHhccccccccccCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEC----CCCEECCCCEE
Confidence 4556777766655555554432 23356677777777777777776 344443 45555555554 12344444444
Q ss_pred CCCCEEe-eeeeCCCCeEeeeeee
Q 017030 347 NANVHLK-VSPANPLCRRIWKCSS 369 (378)
Q Consensus 347 g~~~~i~-~sIi~~~~~~~~~~~~ 369 (378)
|++|.|. +++|+.+++|+++|.|
T Consensus 171 G~~~~I~~~~~I~~~~~IG~~v~I 194 (372)
T 3pmo_A 171 GEGGWLAPRVTLYHDVTIGARVSI 194 (372)
T ss_dssp CTTCEECTTCEECTTEEECTTCEE
T ss_pred CCCcccCCCcEEEeeeEECceeec
Confidence 4444444 3444444444444443
No 79
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=98.61 E-value=1.3e-07 Score=81.48 Aligned_cols=76 Identities=12% Similarity=0.030 Sum_probs=37.8
Q ss_pred CCCCcEEccCCCCCCcee-eCceee-----eeEEecCcEEc-ceEEee---------------ceEcCCCEECCCCEEee
Q 017030 297 DATKPIYTSRRNLPPSKI-DDSKIV-----DSIISHGSFIT-SSFIEH---------------SVVGIRSRINANVHLKV 354 (378)
Q Consensus 297 ~~~~~i~~~~~i~~~~~i-~~~~i~-----~s~Ig~~~~I~-~~~i~~---------------SiI~~~~~Ig~~~~i~~ 354 (378)
.+.+.+..++.|++++.| .++.|. ++.||++|.|+ ++.|.. ++||++|.|+.++.|.+
T Consensus 49 ~~~a~i~~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v~Ig~~~~I~~ 128 (213)
T 3kwd_A 49 HSFSNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNVSITHMALIHG 128 (213)
T ss_dssp CTTSEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTCEECTTCEEEE
T ss_pred CCCCEEeCceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEECCCcEECCCcEEcC
Confidence 334444444444444444 344442 24555555555 455543 45555555555555555
Q ss_pred -eeeCCCCeEeeeeeeeee
Q 017030 355 -SPANPLCRRIWKCSSLCS 372 (378)
Q Consensus 355 -sIi~~~~~~~~~~~~~~~ 372 (378)
++|+++|.|+.+|.+..+
T Consensus 129 ~v~Ig~~v~IG~~a~I~~~ 147 (213)
T 3kwd_A 129 PAYIGDGCFIGFRSTVFNA 147 (213)
T ss_dssp EEEECTTCEECTTCEEEEE
T ss_pred CCEECCCCEECCCCEEeCc
Confidence 555555555555555443
No 80
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=98.60 E-value=1.2e-07 Score=83.62 Aligned_cols=48 Identities=15% Similarity=0.108 Sum_probs=23.1
Q ss_pred eEEecCcEEc-ceEEee-ceEcCCCEECCCCEEeeeeeCCCCeEeeeeee
Q 017030 322 SIISHGSFIT-SSFIEH-SVVGIRSRINANVHLKVSPANPLCRRIWKCSS 369 (378)
Q Consensus 322 s~Ig~~~~I~-~~~i~~-SiI~~~~~Ig~~~~i~~sIi~~~~~~~~~~~~ 369 (378)
++||++|.|+ ++.|.+ ++||++|.||.++.|.++.|++++.|+.+|.+
T Consensus 141 v~IG~~v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~v~Ig~~~~IgagsvV 190 (247)
T 1qre_A 141 VYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFKSKVGNNCVLEPRSAA 190 (247)
T ss_dssp EEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECTTCEE
T ss_pred eEECCCCEECCCCEEcCCcEECCCCEECCCCEEeceEECCCCEECCCCEE
Confidence 4444444444 444444 44455555555554444444444444444444
No 81
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=98.58 E-value=6.2e-08 Score=91.91 Aligned_cols=74 Identities=15% Similarity=0.064 Sum_probs=55.8
Q ss_pred CCCcEEccCCCCCCcee-eCceeeeeEEecCcEEc-ceEEeeceEcCCCEECCCCEEee---------eeeC--------
Q 017030 298 ATKPIYTSRRNLPPSKI-DDSKIVDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKV---------SPAN-------- 358 (378)
Q Consensus 298 ~~~~i~~~~~i~~~~~i-~~~~i~~s~Ig~~~~I~-~~~i~~SiI~~~~~Ig~~~~i~~---------sIi~-------- 358 (378)
+.+.+..++.|+.++.| .++.|.+|+||++|.|+ ++.+.+++||++|.||.++.|.+ +.++
T Consensus 273 ~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~~~~~~~~i~~~~~~~~~ 352 (401)
T 2ggo_A 273 PNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVIAEDVNFGAGTLIANLRFDEKEVKVNVKGKRISSGR 352 (401)
T ss_dssp SSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEESCEECTTCEECTTCEECCSCTTCSCCEEEETTEEEECSC
T ss_pred CCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcceEECCCcEECCCcEEcCcccCCCceeEEECCceEEecc
Confidence 34444455566666666 56788889999999999 89999999999999999999873 3333
Q ss_pred --CCCeEeeeeeeee
Q 017030 359 --PLCRRIWKCSSLC 371 (378)
Q Consensus 359 --~~~~~~~~~~~~~ 371 (378)
.+++|+++|.+-.
T Consensus 353 ~~~~v~Ig~~~~Ig~ 367 (401)
T 2ggo_A 353 RKLGAFIGGHVRTGI 367 (401)
T ss_dssp SSCCCEECTTCEECT
T ss_pred cccCcEECCCeEECC
Confidence 3789999988863
No 82
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=98.57 E-value=1.4e-07 Score=81.69 Aligned_cols=98 Identities=13% Similarity=0.055 Sum_probs=46.8
Q ss_pred ecCCHHHHHHHHHhcccCC-CCccccCCCCcEEccCCCCCCcee-eCceee-eeEEecCcEEc-ceEEe-eceEcCCCEE
Q 017030 272 DIGTIRSFFEANLALTAHP-PMFSFYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIE-HSVVGIRSRI 346 (378)
Q Consensus 272 ~i~t~~~~~~a~~~~l~~~-~~~~~~~~~~~i~~~~~i~~~~~i-~~~~i~-~s~Ig~~~~I~-~~~i~-~SiI~~~~~I 346 (378)
-++++....+....+.... ....++++.+.+...+.+++++.| .++.|. ++.||+||.|+ ++.|. +|+||++|+|
T Consensus 77 AIg~~~~R~~i~~~l~~~g~~~~~~i~~~a~i~~~v~IG~g~~I~~~~~i~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i 156 (220)
T 4ea9_A 77 AIGDNRLRQKLGRKARDHGFSLVNAIHPSAVVSPSVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAACHL 156 (220)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEECCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred ecCCHHHHHHHHHHHHhcCCCcCCcCCCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCCEECCCCEECCCCEE
Confidence 3556555555555444322 112244555555555555555555 334442 44555555555 44443 3555555555
Q ss_pred CCCCEEee-eeeCCCCeEeeeeee
Q 017030 347 NANVHLKV-SPANPLCRRIWKCSS 369 (378)
Q Consensus 347 g~~~~i~~-sIi~~~~~~~~~~~~ 369 (378)
++++.|.+ ++|++++.|+.+|.+
T Consensus 157 ~~~~~i~~~v~Ig~~~~Ig~~~~i 180 (220)
T 4ea9_A 157 GPASALAGGVSVGERAFLGVGARV 180 (220)
T ss_dssp CTTCEECSSCEECTTCEECTTCEE
T ss_pred CCCCEEcCCCEECCCCEECCCCEE
Confidence 55555544 444444444444443
No 83
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=98.55 E-value=1.9e-07 Score=77.68 Aligned_cols=65 Identities=5% Similarity=-0.122 Sum_probs=43.1
Q ss_pred CCCCCCcee-eCceee-----eeEEecCcEEc-ceEEeeceEcCCCEECCCCEEe-eeeeCCCCeEeeeeeee
Q 017030 306 RRNLPPSKI-DDSKIV-----DSIISHGSFIT-SSFIEHSVVGIRSRINANVHLK-VSPANPLCRRIWKCSSL 370 (378)
Q Consensus 306 ~~i~~~~~i-~~~~i~-----~s~Ig~~~~I~-~~~i~~SiI~~~~~Ig~~~~i~-~sIi~~~~~~~~~~~~~ 370 (378)
..|++++.| .++.|. +++||++|.|+ ++.|.+++||++|.||.++.|. ++.|++++.|+.++.+.
T Consensus 52 v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~ 124 (173)
T 1xhd_A 52 TIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILHSCHIKKDALIGMGSIILDGAEIGEGAFIGAGSLVS 124 (173)
T ss_dssp EEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEESCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred EEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEeCCEECCCCEEcCCCEEcCCCEECCCCEECCCCEEC
Confidence 455566666 456665 67777777777 6777777777777777777665 36666666666666554
No 84
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=98.54 E-value=1.7e-07 Score=79.28 Aligned_cols=64 Identities=11% Similarity=0.011 Sum_probs=39.0
Q ss_pred CCCCCcee-eCceee------eeEEecCcEEc-ceEEeeceEcCCCEECCCCEEee-eeeCCCCeEeeeeeee
Q 017030 307 RNLPPSKI-DDSKIV------DSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKV-SPANPLCRRIWKCSSL 370 (378)
Q Consensus 307 ~i~~~~~i-~~~~i~------~s~Ig~~~~I~-~~~i~~SiI~~~~~Ig~~~~i~~-sIi~~~~~~~~~~~~~ 370 (378)
.|++++.| +++.|. +++||++|.|+ ++.+.+++||++|.||.++.|.+ +.|++++.|+.++.+.
T Consensus 74 ~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~gsvV~ 146 (191)
T 3ixc_A 74 EVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCILHACTLGNNAFVGMGSIVMDRAVMEEGSMLAAGSLLT 146 (191)
T ss_dssp EECTTCEECTTCEECC----CCEEECTTCEECTTCEECSCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred EECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEEECCEECCCCEECCCCEEeCCeEECCCCEECCCCEEC
Confidence 44555555 445554 56666666666 66666666666666666666665 5566666665555554
No 85
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=98.52 E-value=1.3e-07 Score=79.84 Aligned_cols=76 Identities=11% Similarity=-0.105 Sum_probs=60.9
Q ss_pred ccCCCCcEEccC---CCCCCcee-eCcee------------eeeEEecCcEEc-ceEEeeceEcCCCEECCCCEEe-eee
Q 017030 295 FYDATKPIYTSR---RNLPPSKI-DDSKI------------VDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLK-VSP 356 (378)
Q Consensus 295 ~~~~~~~i~~~~---~i~~~~~i-~~~~i------------~~s~Ig~~~~I~-~~~i~~SiI~~~~~Ig~~~~i~-~sI 356 (378)
.+.+.+.+..+. .|+.++.| .++.| .+++||++|.|+ ++.|.+++||++|.||.++.|. ++.
T Consensus 41 ~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~~~~ 120 (187)
T 3r3r_A 41 GIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHGCTIGNRVLVGMGSIVLDGAI 120 (187)
T ss_dssp EECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCEECTTCEEESCEECSSEEECTTCEECTTCE
T ss_pred EECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECCCCEECCCCEEeCcEECCCCEECCCCEECCCCE
Confidence 444555555543 77788888 56777 689999999999 8999999999999999999994 588
Q ss_pred eCCCCeEeeeeeee
Q 017030 357 ANPLCRRIWKCSSL 370 (378)
Q Consensus 357 i~~~~~~~~~~~~~ 370 (378)
|++++.|+.++.+.
T Consensus 121 Ig~~~~Ig~~s~V~ 134 (187)
T 3r3r_A 121 IEDDVMIGAGSLVP 134 (187)
T ss_dssp ECSSEEECTTCEEC
T ss_pred ECCCCEECCCCEEC
Confidence 88888888877766
No 86
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=98.51 E-value=1.5e-07 Score=85.84 Aligned_cols=75 Identities=7% Similarity=-0.075 Sum_probs=41.0
Q ss_pred ccCCCCcEEccCCCCCCcee-eCceee-eeEEecCcEEc-ceEEe-eceEcCCCEECCCCEEe-----eeeeCCCCeEee
Q 017030 295 FYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHLK-----VSPANPLCRRIW 365 (378)
Q Consensus 295 ~~~~~~~i~~~~~i~~~~~i-~~~~i~-~s~Ig~~~~I~-~~~i~-~SiI~~~~~Ig~~~~i~-----~sIi~~~~~~~~ 365 (378)
.++|.+.|.+++.|++++.| ..+.|. ++.||+||.|+ ++.|. ++.||++|+|++++.|. +++|++++.|+.
T Consensus 9 ~I~p~A~I~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~d~~g~~~IG~~~~Ig~ 88 (305)
T 3t57_A 9 LIHPSAVVHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVVGDELPGYTFIGCNNIIGH 88 (305)
T ss_dssp CBCTTSEECTTSEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECTTCEECTTCEECCSSSEEEEECSSCEECT
T ss_pred eECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCcEEccCcEeccCCCCceEECCceEECC
Confidence 44555556656666666655 344443 55555555555 55554 55555555555555554 355555555555
Q ss_pred eeee
Q 017030 366 KCSS 369 (378)
Q Consensus 366 ~~~~ 369 (378)
+|++
T Consensus 89 ~a~I 92 (305)
T 3t57_A 89 HAVV 92 (305)
T ss_dssp TCEE
T ss_pred ccEe
Confidence 5544
No 87
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=98.51 E-value=2e-07 Score=83.17 Aligned_cols=49 Identities=14% Similarity=0.162 Sum_probs=30.4
Q ss_pred eeEEecCcEEc-ceEE--------------eeceEcCCCEECCCCEEee--------eeeCCCCeEeeeeee
Q 017030 321 DSIISHGSFIT-SSFI--------------EHSVVGIRSRINANVHLKV--------SPANPLCRRIWKCSS 369 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i--------------~~SiI~~~~~Ig~~~~i~~--------sIi~~~~~~~~~~~~ 369 (378)
++.||++|.|+ ++.| .+++||++|.|++++.|.. ++|++++.|+.+|++
T Consensus 52 ~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I 123 (266)
T 3r0s_A 52 DTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAKGDGFTRIGDNAFIMAYCHI 123 (266)
T ss_dssp SCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTCEECTTCEEECCCTTTTSEEEECTTCEECTTCEE
T ss_pred CcEECCCcEEccCceeccCCccccccCCcCceEEECCCCEECCceEecCCcccCCccEEECCCceeCCcceE
Confidence 56666666666 6666 4677777777777777753 555555555544444
No 88
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=98.50 E-value=2.3e-07 Score=83.62 Aligned_cols=17 Identities=24% Similarity=0.345 Sum_probs=9.7
Q ss_pred eceEcCCCEECCCCEEe
Q 017030 337 HSVVGIRSRINANVHLK 353 (378)
Q Consensus 337 ~SiI~~~~~Ig~~~~i~ 353 (378)
+++||+++.|+++|.|.
T Consensus 100 ~v~IG~~~~Ig~~~~I~ 116 (283)
T 4eqy_A 100 RLVIGDRNTIREFTTIH 116 (283)
T ss_dssp EEEECSSCEECTTEEEE
T ss_pred eEEECCCcccCcceeEc
Confidence 45555555555555554
No 89
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=98.50 E-value=3.8e-07 Score=80.49 Aligned_cols=78 Identities=6% Similarity=-0.003 Sum_probs=56.8
Q ss_pred ccCCCCcEEccCCCCCCcee-eCceeee-----eEEecCcEEc-ceEEe------------------------eceEcCC
Q 017030 295 FYDATKPIYTSRRNLPPSKI-DDSKIVD-----SIISHGSFIT-SSFIE------------------------HSVVGIR 343 (378)
Q Consensus 295 ~~~~~~~i~~~~~i~~~~~i-~~~~i~~-----s~Ig~~~~I~-~~~i~------------------------~SiI~~~ 343 (378)
++.+.+.+..++.|+++++| .++.|.. ++||++|.|+ ++.|. +++||++
T Consensus 67 ~I~~~a~I~g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~~~~~~~~~v~IG~~ 146 (247)
T 1qre_A 67 YIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNN 146 (247)
T ss_dssp EECTTCEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCGGGCEEETTEEESEEECTT
T ss_pred EECCCCEEeCCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEecccccccCcccccceeeccCccCceEECCC
Confidence 34444555555666666666 4566653 3788888888 77775 3788999
Q ss_pred CEECCCCEEee-eeeCCCCeEeeeeeeeee
Q 017030 344 SRINANVHLKV-SPANPLCRRIWKCSSLCS 372 (378)
Q Consensus 344 ~~Ig~~~~i~~-sIi~~~~~~~~~~~~~~~ 372 (378)
|.||.+|.|.+ ++|+++|.|+.+|.+...
T Consensus 147 v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~v 176 (247)
T 1qre_A 147 VSLAHQSQVHGPAAVGDDTFIGMQAFVFKS 176 (247)
T ss_dssp CEECTTCEEEEEEEECTTCEECTTCEEEEE
T ss_pred CEECCCCEEcCCcEECCCCEECCCCEEece
Confidence 99999999988 889999988888887663
No 90
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=98.49 E-value=1.8e-07 Score=90.05 Aligned_cols=72 Identities=11% Similarity=0.175 Sum_probs=60.1
Q ss_pred cCCCCCCcee-eCceee-eeEEecCcEEc-ceEEeeceEcCCCEECCCCEEeeeeeCCCCeEeeeeeeeeeeEee
Q 017030 305 SRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKVSPANPLCRRIWKCSSLCSVICM 376 (378)
Q Consensus 305 ~~~i~~~~~i-~~~~i~-~s~Ig~~~~I~-~~~i~~SiI~~~~~Ig~~~~i~~sIi~~~~~~~~~~~~~~~~~~~ 376 (378)
...++++++| .++.+. ++.||++|.|+ ++.|.+++||++|.|+++|.|.+|+|++++.|+.+|.+.+++|..
T Consensus 273 ~~~I~~~a~I~p~a~i~g~v~IG~~~~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd 347 (496)
T 3c8v_A 273 GAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGD 347 (496)
T ss_dssp ---CCTTCEECTTSEEESSCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEE
T ss_pred CcccCCCcEECCCcEEeCCeEECCCCEECCCcEEeceEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECC
Confidence 4556777777 455554 88999999999 899999999999999999999999999999999999998877653
No 91
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=98.48 E-value=2.3e-07 Score=79.47 Aligned_cols=78 Identities=10% Similarity=-0.141 Sum_probs=60.4
Q ss_pred ccCCCCcEEccCCCCCCcee-eCcee----eeeEEecCcEEc-ceEE--------------------------eeceEcC
Q 017030 295 FYDATKPIYTSRRNLPPSKI-DDSKI----VDSIISHGSFIT-SSFI--------------------------EHSVVGI 342 (378)
Q Consensus 295 ~~~~~~~i~~~~~i~~~~~i-~~~~i----~~s~Ig~~~~I~-~~~i--------------------------~~SiI~~ 342 (378)
.+.+.+.+...+.|+.++.| .++.| .+++||++|.|+ ++.| .+++||+
T Consensus 60 ~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IG~ 139 (205)
T 3vbi_A 60 RIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVYAAIDDFSGNALMGPTIPNQYKNVKTGKVILKK 139 (205)
T ss_dssp EECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEEESEECCCSSSSCCSTTSCGGGCCCEECCEEECT
T ss_pred EECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEEEeCCCCcccccccCcccccccceeccCCEEECC
Confidence 55566777778888888888 57777 348999999999 8888 4578888
Q ss_pred CCEECCCCEEe-eeeeCCCCeEeeeeeeeee
Q 017030 343 RSRINANVHLK-VSPANPLCRRIWKCSSLCS 372 (378)
Q Consensus 343 ~~~Ig~~~~i~-~sIi~~~~~~~~~~~~~~~ 372 (378)
+|.||.+|.|. ++.|++++.|+.++.+..+
T Consensus 140 ~v~IG~~~~I~~gv~Ig~~~~Ig~gsvV~~~ 170 (205)
T 3vbi_A 140 HVIIGAHSIIFPNVVIGEGVAVGAMSMVKES 170 (205)
T ss_dssp TCEECTTCEECSSCEECTTCEECTTCEECSC
T ss_pred CCEECCCCEEcCCCEECCCCEEcCCCEECCc
Confidence 88888888876 5777777777777776554
No 92
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=98.47 E-value=3.4e-07 Score=76.17 Aligned_cols=65 Identities=12% Similarity=-0.078 Sum_probs=47.7
Q ss_pred CCCCCCcee-eCceee-----eeEEecCcEEc-ceEEeeceEcCCCEECCCCEEee-eeeCCCCeEeeeeeee
Q 017030 306 RRNLPPSKI-DDSKIV-----DSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKV-SPANPLCRRIWKCSSL 370 (378)
Q Consensus 306 ~~i~~~~~i-~~~~i~-----~s~Ig~~~~I~-~~~i~~SiI~~~~~Ig~~~~i~~-sIi~~~~~~~~~~~~~ 370 (378)
+.|++++.| .++.|. +++||++|.|+ ++.|.+++||++|.||.++.|.+ +.|++++.|+.++.+.
T Consensus 50 ~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~ 122 (173)
T 1v3w_A 50 IYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNYVIIGISSVILDGAKIGDHVIIGAGAVVP 122 (173)
T ss_dssp EEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECSSEEECTTCEECTTCEECSSEEECTTCEEC
T ss_pred EEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECCCCEECCCCEEeCCCEECCCCEECCCCEEC
Confidence 556666666 566665 57888888888 78888888888888888887654 7777777777777665
No 93
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=98.45 E-value=3.2e-07 Score=81.74 Aligned_cols=49 Identities=16% Similarity=0.124 Sum_probs=27.1
Q ss_pred eeEEecCcEEc-ceEEe-------------eceEcCCCEECCCCEEee--------eeeCCCCeEeeeeee
Q 017030 321 DSIISHGSFIT-SSFIE-------------HSVVGIRSRINANVHLKV--------SPANPLCRRIWKCSS 369 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i~-------------~SiI~~~~~Ig~~~~i~~--------sIi~~~~~~~~~~~~ 369 (378)
++.||++|.|+ ++.|. +++||+++.|++++.|.. ++|++++.|+.+|++
T Consensus 53 ~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~Ig~~~~I 123 (262)
T 2qia_A 53 HTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHI 123 (262)
T ss_dssp EEEECSSCEECTTCEEEECCSCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSEEEECSSCEECTTCEE
T ss_pred CcEECCCCEEecceEECcCCccccccCCccceEECCCceeCCCCEEcCCccCCCCcCEECCCcEEeeeeEE
Confidence 45555555555 55553 456666666666666642 555555555554444
No 94
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=98.45 E-value=2.8e-07 Score=88.88 Aligned_cols=67 Identities=15% Similarity=0.059 Sum_probs=43.7
Q ss_pred ccCCCCCCcee-eCcee-eeeEEecCcEEc-ceEEeeceEcCCCEECCCCEEeeeeeCCCCeEeeeeeee
Q 017030 304 TSRRNLPPSKI-DDSKI-VDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKVSPANPLCRRIWKCSSL 370 (378)
Q Consensus 304 ~~~~i~~~~~i-~~~~i-~~s~Ig~~~~I~-~~~i~~SiI~~~~~Ig~~~~i~~sIi~~~~~~~~~~~~~ 370 (378)
+.+.+++++.| .++.| .++.||+||.|+ ++.|.+++||++|+|++++.|.+++|++++.|+.+|.+.
T Consensus 267 ~~~~ig~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~ 336 (459)
T 4fce_A 267 GELTHGRDITIDTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLR 336 (459)
T ss_dssp EEEEECSSCEECTTEEEEEEEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTTCEECSSEEEC
T ss_pred CcEEECCCcEECCCeeeccceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCCCEECCccEEC
Confidence 34445555555 34554 356677777777 677777777777777777777777777777777776665
No 95
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=98.44 E-value=3e-07 Score=81.41 Aligned_cols=68 Identities=12% Similarity=0.060 Sum_probs=49.6
Q ss_pred cCCCCCCcee-eCceee----eeEEecCcEEc-ceEEeec--------------------eEcCCCEECCCCEEe-eeee
Q 017030 305 SRRNLPPSKI-DDSKIV----DSIISHGSFIT-SSFIEHS--------------------VVGIRSRINANVHLK-VSPA 357 (378)
Q Consensus 305 ~~~i~~~~~i-~~~~i~----~s~Ig~~~~I~-~~~i~~S--------------------iI~~~~~Ig~~~~i~-~sIi 357 (378)
...|++++.| .++.|. ++.||++|.|+ ++.|.++ +||++|.||.+|.|. ++.|
T Consensus 105 ~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~gv~I 184 (252)
T 3jqy_B 105 KVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKGVSV 184 (252)
T ss_dssp EEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCCEEECSSCEECSSEEECTTCEE
T ss_pred EEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCCeEEecCcEECCCCEECCCCEE
Confidence 3456666666 466666 78888888888 7888876 788888888887665 4777
Q ss_pred CCCCeEeeeeeeeee
Q 017030 358 NPLCRRIWKCSSLCS 372 (378)
Q Consensus 358 ~~~~~~~~~~~~~~~ 372 (378)
+++++|+.++.+..+
T Consensus 185 G~~~~IgagsvV~~~ 199 (252)
T 3jqy_B 185 GSGSVIGYGSIVTKD 199 (252)
T ss_dssp CTTCEECTTCEECSC
T ss_pred CCCCEECCCCEECcc
Confidence 777777777766544
No 96
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=98.44 E-value=2.8e-07 Score=78.02 Aligned_cols=15 Identities=7% Similarity=-0.053 Sum_probs=6.1
Q ss_pred eeeCCCCeEeeeeee
Q 017030 355 SPANPLCRRIWKCSS 369 (378)
Q Consensus 355 sIi~~~~~~~~~~~~ 369 (378)
++|++++.|+.+|.+
T Consensus 103 ~~Ig~~v~IG~~~~I 117 (192)
T 3mqg_A 103 TIVRQGATLGANCTV 117 (192)
T ss_dssp EEECTTCEECTTCEE
T ss_pred cEECCCcEECCCCEE
Confidence 344444444444433
No 97
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.44 E-value=3.3e-07 Score=81.71 Aligned_cols=75 Identities=12% Similarity=-0.008 Sum_probs=60.6
Q ss_pred CCcEEccCCCCCCceee---Cceee-eeEEecCcEEc-ceEEee---------ceEcCCCEECCCCEEee-eeeCCCCeE
Q 017030 299 TKPIYTSRRNLPPSKID---DSKIV-DSIISHGSFIT-SSFIEH---------SVVGIRSRINANVHLKV-SPANPLCRR 363 (378)
Q Consensus 299 ~~~i~~~~~i~~~~~i~---~~~i~-~s~Ig~~~~I~-~~~i~~---------SiI~~~~~Ig~~~~i~~-sIi~~~~~~ 363 (378)
...|.+.+.|++++.|+ ++.|. +++||+||.|+ ++.|.+ ++||+||.||.||.|.. +.|+++++|
T Consensus 164 gi~I~p~a~IG~~v~I~hg~gvvIG~~~~IGd~v~I~~gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~gv~IG~~a~I 243 (287)
T 3mc4_A 164 QTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQCSKI 243 (287)
T ss_dssp CCEECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEEC-----CCCSCEECTTCEECTTCEEESSCEECTTCEE
T ss_pred CeEECCCCEECCCeEEccCCCeEECCCeEECCCCEEcCCCEEcCCcccCCCcCCEECCCCEECCCCEECCCcEECCCCEE
Confidence 45677778888888884 55553 68888888888 777766 69999999999999985 999999999
Q ss_pred eeeeeeeeee
Q 017030 364 IWKCSSLCSV 373 (378)
Q Consensus 364 ~~~~~~~~~~ 373 (378)
+.++.+..+|
T Consensus 244 GagsvV~kdV 253 (287)
T 3mc4_A 244 AAGSVVLKSV 253 (287)
T ss_dssp CTTCEECSCB
T ss_pred CCCCEEcccc
Confidence 9999887665
No 98
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=98.42 E-value=3.5e-07 Score=77.32 Aligned_cols=70 Identities=7% Similarity=-0.089 Sum_probs=48.7
Q ss_pred ccCCCCCCcee-eCceee---eeEEecCcEEc-ceEEee-------------------ceEcCCCEECCCCEEe-eeeeC
Q 017030 304 TSRRNLPPSKI-DDSKIV---DSIISHGSFIT-SSFIEH-------------------SVVGIRSRINANVHLK-VSPAN 358 (378)
Q Consensus 304 ~~~~i~~~~~i-~~~~i~---~s~Ig~~~~I~-~~~i~~-------------------SiI~~~~~Ig~~~~i~-~sIi~ 358 (378)
.++.|+++++| .++.+. +..||+||.|+ ++.|.+ ++||++|.||.+|.|. ++.|+
T Consensus 77 ~~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG 156 (190)
T 3hjj_A 77 YNIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGNNVWVGGGAIINPGVSIG 156 (190)
T ss_dssp TTEEECTTCEECTTCEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTSSEEEECCEEECTTCEECTTCEECTTCEEC
T ss_pred CceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEEecCCccCchhhccccccccCCeEECCCCEECCCCEECCCCEEC
Confidence 35666677777 456664 45788888888 777733 4788888888887776 57777
Q ss_pred CCCeEeeeeeeeeee
Q 017030 359 PLCRRIWKCSSLCSV 373 (378)
Q Consensus 359 ~~~~~~~~~~~~~~~ 373 (378)
++++|+.++.+..+|
T Consensus 157 ~~~vIgagsvV~~dv 171 (190)
T 3hjj_A 157 DNAVIASGAVVTKDV 171 (190)
T ss_dssp TTCEECTTCEECSCB
T ss_pred CCCEECCCCEECccc
Confidence 777777777665543
No 99
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=98.42 E-value=4.2e-07 Score=81.44 Aligned_cols=48 Identities=13% Similarity=0.142 Sum_probs=22.4
Q ss_pred eEEecCcEEc-ceEE-eeceEcCCCEECCCCEEe-eeeeCCCCeEeeeeee
Q 017030 322 SIISHGSFIT-SSFI-EHSVVGIRSRINANVHLK-VSPANPLCRRIWKCSS 369 (378)
Q Consensus 322 s~Ig~~~~I~-~~~i-~~SiI~~~~~Ig~~~~i~-~sIi~~~~~~~~~~~~ 369 (378)
++||++|.|+ ++.| .+++||+++.||+++.|. ++.|++++.|+.+|.+
T Consensus 71 ~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~~~i 121 (273)
T 3fs8_A 71 LIIGENALIRTENVIYGDTIIGDNFQTGHKVTIRENTKIGNNVKIGTLSDI 121 (273)
T ss_dssp EEECTTCEECTTCEEESSCEECTTCEECSSCEECSSCEECSSCEECTTCEE
T ss_pred eEECCCCEECCCCEEeCCCEECCCCEECCceEECCCCEECCCCEECcccee
Confidence 4444444444 4444 245555555555555553 4445444444444433
No 100
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=98.42 E-value=2.8e-07 Score=88.76 Aligned_cols=69 Identities=22% Similarity=0.134 Sum_probs=62.9
Q ss_pred ccCCCCCCceeeCceeeeeEEecCcEEc-ceEEeeceEcCC-------------------CEECCCCEEeeeeeCCCCeE
Q 017030 304 TSRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIEHSVVGIR-------------------SRINANVHLKVSPANPLCRR 363 (378)
Q Consensus 304 ~~~~i~~~~~i~~~~i~~s~Ig~~~~I~-~~~i~~SiI~~~-------------------~~Ig~~~~i~~sIi~~~~~~ 363 (378)
.++.|+++|+|.++.+.+|+||++|.|| ++.|.+|++..+ ++||+|+.|.+++|+++|.|
T Consensus 329 ~~~~Ig~~~~I~~~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~~~I 408 (451)
T 1yp2_A 329 TDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARI 408 (451)
T ss_dssp EEEEECTTCEEEEEEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEECTTCEE
T ss_pred eCeEECCCCEEcceEEeccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeCCCcEE
Confidence 4678888999966888899999999999 999999999888 99999999999999999999
Q ss_pred eeeeeeeee
Q 017030 364 IWKCSSLCS 372 (378)
Q Consensus 364 ~~~~~~~~~ 372 (378)
+.+|.+...
T Consensus 409 G~~~~i~~~ 417 (451)
T 1yp2_A 409 GDNVKIINK 417 (451)
T ss_dssp CTTCEECCS
T ss_pred CCCCEEeCC
Confidence 999998753
No 101
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=98.40 E-value=4.3e-07 Score=76.66 Aligned_cols=76 Identities=13% Similarity=-0.003 Sum_probs=56.9
Q ss_pred ccCCCCcEEc---cCCCCCCcee-eCceeeee------------EEecCcEEc-ceEEeeceEcCCCEECCCCEEe-eee
Q 017030 295 FYDATKPIYT---SRRNLPPSKI-DDSKIVDS------------IISHGSFIT-SSFIEHSVVGIRSRINANVHLK-VSP 356 (378)
Q Consensus 295 ~~~~~~~i~~---~~~i~~~~~i-~~~~i~~s------------~Ig~~~~I~-~~~i~~SiI~~~~~Ig~~~~i~-~sI 356 (378)
.+.+.+.+.. ...|+.++.| .++.|..+ +||++|.|+ ++.|.+++||++|.||.++.|. ++.
T Consensus 45 ~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~~v~ 124 (189)
T 3r1w_A 45 SVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQAMLHGCTIGNRVLIGMKSMIMDGAI 124 (189)
T ss_dssp EECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECTTCEEESCEECSSEEECTTCEECTTCE
T ss_pred EECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECCCCEEeCcEECCCcEECCCCEEcCCCE
Confidence 4445555553 3367777777 56666554 999999999 8999999999999999999884 577
Q ss_pred eCCCCeEeeeeeee
Q 017030 357 ANPLCRRIWKCSSL 370 (378)
Q Consensus 357 i~~~~~~~~~~~~~ 370 (378)
|++++.|+.++.+.
T Consensus 125 Ig~~~~Ig~~s~V~ 138 (189)
T 3r1w_A 125 VEDEVIVAAGATVS 138 (189)
T ss_dssp ECSSCEECTTCEEC
T ss_pred ECCCCEEccCCEEC
Confidence 77777777776665
No 102
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=98.39 E-value=6.4e-07 Score=79.91 Aligned_cols=49 Identities=10% Similarity=0.014 Sum_probs=31.4
Q ss_pred eeEEecCcEEc-ceEE-------------eeceEcCCCEECCCCEEe--------eeeeCCCCeEeeeeee
Q 017030 321 DSIISHGSFIT-SSFI-------------EHSVVGIRSRINANVHLK--------VSPANPLCRRIWKCSS 369 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i-------------~~SiI~~~~~Ig~~~~i~--------~sIi~~~~~~~~~~~~ 369 (378)
++.||++|.|+ ++.| .+++||+++.|++++.|. +++|++++.++.+|++
T Consensus 55 ~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I 125 (265)
T 4e6u_A 55 FTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNNLIREHCSLHRGTVQDNALTKIGSHNLLMVNTHI 125 (265)
T ss_dssp SEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSEEEECSSCEECTTCEE
T ss_pred CcEECCCCEEcCCcEECCccccccccCCCCeEEECCCeEECCceEECcccccCCCceEEccCcEEeeeeEE
Confidence 46666666666 5666 467777777777777776 3566655555555544
No 103
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=98.37 E-value=5.1e-07 Score=87.35 Aligned_cols=70 Identities=17% Similarity=0.088 Sum_probs=57.7
Q ss_pred cCCCCCCceeeCceeeeeEEecCcEEc-ceEEe-eceEcCCCEECCCCEEeeeeeCCCCeEeeeeeeeeeeE
Q 017030 305 SRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIE-HSVVGIRSRINANVHLKVSPANPLCRRIWKCSSLCSVI 374 (378)
Q Consensus 305 ~~~i~~~~~i~~~~i~~s~Ig~~~~I~-~~~i~-~SiI~~~~~Ig~~~~i~~sIi~~~~~~~~~~~~~~~~~ 374 (378)
++.|+.++.|.++.+.++.||++|.|+ ++.|. +++||++++||+++.|.+++|+++++|+..|.+..+.|
T Consensus 309 ~~~ig~~~~i~~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~Ig~~~~i~~~~~i~~~~I 380 (468)
T 1hm9_A 309 DSTIGAGAVITNSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGENTKAGHLTYIGNCEV 380 (468)
T ss_dssp SCEECTTCEECSCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEESCEECTTCEEEEEEEEESEEE
T ss_pred ccEEeCCcEEEEEEEeccccCCCcEECCceEEecCcEECCccEECCCcEEeeeEEcCCcEeCCceEEccccc
Confidence 444555666666677788999999999 88888 89999999999999999999999999999888765555
No 104
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.37 E-value=8.3e-07 Score=74.57 Aligned_cols=69 Identities=13% Similarity=-0.033 Sum_probs=46.7
Q ss_pred ccCCCCCCcee-eCcee---eeeEEecCcEEc-ceEEe-------------------eceEcCCCEECCCCEEe-eeeeC
Q 017030 304 TSRRNLPPSKI-DDSKI---VDSIISHGSFIT-SSFIE-------------------HSVVGIRSRINANVHLK-VSPAN 358 (378)
Q Consensus 304 ~~~~i~~~~~i-~~~~i---~~s~Ig~~~~I~-~~~i~-------------------~SiI~~~~~Ig~~~~i~-~sIi~ 358 (378)
.+..|+++++| .++.+ .+..||++|.|+ ++.|. .+.||++|.||.+|.|. ++.|+
T Consensus 73 ~~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~~~I~~gv~IG 152 (185)
T 2p2o_A 73 YNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINPGVTIG 152 (185)
T ss_dssp TTEEECTTEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHHTCCBEECCEEECSSCEECTTCEECTTCEEC
T ss_pred CCEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEEEcCCCcCChhhcccCccccCCeEEcCCeEECCCCEECCCCEEC
Confidence 45566677777 45666 356788888888 77774 46777777777777776 56666
Q ss_pred CCCeEeeeeeeeee
Q 017030 359 PLCRRIWKCSSLCS 372 (378)
Q Consensus 359 ~~~~~~~~~~~~~~ 372 (378)
+++.|+.++.+..+
T Consensus 153 ~~~vIgagsvV~~~ 166 (185)
T 2p2o_A 153 DNAVIASGAVVTKD 166 (185)
T ss_dssp TTCEECTTCEECSC
T ss_pred CCCEECCCCEECCC
Confidence 66666666665443
No 105
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.36 E-value=8.2e-07 Score=74.87 Aligned_cols=68 Identities=10% Similarity=-0.101 Sum_probs=42.2
Q ss_pred cCCCCCCcee-eCceeee---eEEecCcEEc-ceEE-------------------eeceEcCCCEECCCCEEe-eeeeCC
Q 017030 305 SRRNLPPSKI-DDSKIVD---SIISHGSFIT-SSFI-------------------EHSVVGIRSRINANVHLK-VSPANP 359 (378)
Q Consensus 305 ~~~i~~~~~i-~~~~i~~---s~Ig~~~~I~-~~~i-------------------~~SiI~~~~~Ig~~~~i~-~sIi~~ 359 (378)
+..|+++++| .++.+.+ ..||++|.|+ ++.| ..++||++|.||.||.|. ++.|++
T Consensus 76 ~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~ 155 (188)
T 3srt_A 76 NIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGD 155 (188)
T ss_dssp TEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSCEECTTCEECTTCEECS
T ss_pred CeEECCcccccCceEEecCCceEECCeeEECCCcEEeeCCccCchhhccccceECCCcEECCCcEEcCCCEECCCcEECC
Confidence 4556666666 4555543 3677888877 6766 356677777777776664 355555
Q ss_pred CCeEeeeeeeeee
Q 017030 360 LCRRIWKCSSLCS 372 (378)
Q Consensus 360 ~~~~~~~~~~~~~ 372 (378)
++.|+.++.+..+
T Consensus 156 ~~vIgagsvV~~d 168 (188)
T 3srt_A 156 NVVIGAGSVVTKD 168 (188)
T ss_dssp SEEECTTCEECSC
T ss_pred CCEECCCCEECcc
Confidence 5555555555444
No 106
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.35 E-value=6.6e-07 Score=79.17 Aligned_cols=103 Identities=12% Similarity=0.013 Sum_probs=72.3
Q ss_pred cceEEecCCHHHHHHHHHhcccCCCCcc-------ccCCCCcEEccCCCCCCceee---Cceee-eeEEecCcEEc-ceE
Q 017030 267 NDYWEDIGTIRSFFEANLALTAHPPMFS-------FYDATKPIYTSRRNLPPSKID---DSKIV-DSIISHGSFIT-SSF 334 (378)
Q Consensus 267 ~~~~~~i~t~~~~~~a~~~~l~~~~~~~-------~~~~~~~i~~~~~i~~~~~i~---~~~i~-~s~Ig~~~~I~-~~~ 334 (378)
+||| ....|..++..+........ .......|++.+.|++++.|+ ++.|. +++||+||.|+ ++.
T Consensus 102 ~g~~----al~~yR~ah~l~~~~~~~l~~~l~~~~~~~~g~~I~p~a~IG~g~~I~~~~~vvIG~~~~IG~~v~I~~gvt 177 (267)
T 1ssq_A 102 KGFH----AIQSYRITHYLWNQNRKSLALYLQNQISVAFDVDIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVT 177 (267)
T ss_dssp HHHH----HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHSCEECTTCEECSSCEESSCTTCEECTTCEECTTCEECTTCE
T ss_pred chHH----HHHHHHHHHHHHHhHHHHHHHHHHHhceeccceEeCCCCEECCCEEECCCCceEECCeeEECCCCEEcCCcE
Confidence 5666 44566666655543321110 111245567778888888884 45664 78899999998 788
Q ss_pred Eee---------ceEcCCCEECCCCEEe-eeeeCCCCeEeeeeeeeeee
Q 017030 335 IEH---------SVVGIRSRINANVHLK-VSPANPLCRRIWKCSSLCSV 373 (378)
Q Consensus 335 i~~---------SiI~~~~~Ig~~~~i~-~sIi~~~~~~~~~~~~~~~~ 373 (378)
|.+ ++||++|.||.|+.|. ++.||++++|+.++.+..+|
T Consensus 178 ig~~~~~~~~~~~~IGd~v~IGaga~Il~gv~IG~~a~IGagsvV~~dV 226 (267)
T 1ssq_A 178 LGGTGKESGDRHPKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLNPV 226 (267)
T ss_dssp EECCSSSCSSCSCEECTTCEECTTCEEESSCEECTTCEECTTCEECSCB
T ss_pred ECCCcccCCCCCeEECCCeEEcCCCEEeCCcEECCCCEECCCCEEccCC
Confidence 876 5899999999999987 48899999999998877654
No 107
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=98.34 E-value=9.2e-07 Score=78.58 Aligned_cols=53 Identities=13% Similarity=0.070 Sum_probs=33.8
Q ss_pred Cceee-eeEEecCcEEc-ceEE--------------eeceEcCCCEECCCCEEe-------eeeeCCCCeEeeeee
Q 017030 316 DSKIV-DSIISHGSFIT-SSFI--------------EHSVVGIRSRINANVHLK-------VSPANPLCRRIWKCS 368 (378)
Q Consensus 316 ~~~i~-~s~Ig~~~~I~-~~~i--------------~~SiI~~~~~Ig~~~~i~-------~sIi~~~~~~~~~~~ 368 (378)
++.|. ++.||++|.|+ ++.| .+++||+++.|++++.|. .++|++++.|..+|+
T Consensus 42 ~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~IG~~~~I~~~~~ 117 (259)
T 3hsq_A 42 HVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDHNIFREYSNIHKGTKEDSPTVIGNKNYFMGNSH 117 (259)
T ss_dssp TCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSSCEECTTCEEECCSBTTBCEEECSSCEECTTCE
T ss_pred CcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECCCcEECCCCEECCCccCCCcEEECCCcEEcCCcE
Confidence 44444 36777777777 6666 567788888888888887 455555444443333
No 108
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=98.34 E-value=8e-07 Score=75.35 Aligned_cols=59 Identities=15% Similarity=0.232 Sum_probs=31.4
Q ss_pred cCCCCcEEccCCCCCCcee-eCceee----eeEEecCcEEc-ceEEe-----------------eceEcCCCEECCCCEE
Q 017030 296 YDATKPIYTSRRNLPPSKI-DDSKIV----DSIISHGSFIT-SSFIE-----------------HSVVGIRSRINANVHL 352 (378)
Q Consensus 296 ~~~~~~i~~~~~i~~~~~i-~~~~i~----~s~Ig~~~~I~-~~~i~-----------------~SiI~~~~~Ig~~~~i 352 (378)
+.+++.+..++.|+++|.| .++.|. +..||+||.|+ ++.|. +++||++++|+.++.+
T Consensus 21 I~~~a~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~~i 100 (194)
T 3tv0_A 21 VCVESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMIIGTNNVFEVGCYS 100 (194)
T ss_dssp ECTTSEEESSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCEEECSSCEECTTCEE
T ss_pred EcCCCEEeCCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCceEECCcceEecceeE
Confidence 3344444445555555555 344443 34666666666 56553 2456666666655555
Q ss_pred ee
Q 017030 353 KV 354 (378)
Q Consensus 353 ~~ 354 (378)
.+
T Consensus 101 ~~ 102 (194)
T 3tv0_A 101 QA 102 (194)
T ss_dssp CC
T ss_pred ee
Confidence 43
No 109
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=98.33 E-value=8.4e-07 Score=75.21 Aligned_cols=78 Identities=9% Similarity=-0.071 Sum_probs=54.0
Q ss_pred ccCCCCcEEccCCCCCCcee-eCceee-eeEEecCcEEc-ceEEee-ceEcCCCEECCCCEEe-eeeeCCCCeEeeeeee
Q 017030 295 FYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIEH-SVVGIRSRINANVHLK-VSPANPLCRRIWKCSS 369 (378)
Q Consensus 295 ~~~~~~~i~~~~~i~~~~~i-~~~~i~-~s~Ig~~~~I~-~~~i~~-SiI~~~~~Ig~~~~i~-~sIi~~~~~~~~~~~~ 369 (378)
.+.+.+.+..++.|++++.| .++.+. ++.||++|.|+ ++.|.+ +.||++|.||.++.|. ++.|++++.|+.++.+
T Consensus 97 ~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Igagsvv 176 (194)
T 3bfp_A 97 LIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLADDSILGGGATL 176 (194)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred EEcCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCcEECCCCEEcCCCEECCCCEECCCCEECCCCEE
Confidence 33444555556666666666 466664 78888888888 777766 8888888888888774 3667777777777665
Q ss_pred eee
Q 017030 370 LCS 372 (378)
Q Consensus 370 ~~~ 372 (378)
..+
T Consensus 177 ~~~ 179 (194)
T 3bfp_A 177 VKN 179 (194)
T ss_dssp CSC
T ss_pred ccc
Confidence 543
No 110
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=98.33 E-value=8.1e-07 Score=75.35 Aligned_cols=69 Identities=14% Similarity=-0.013 Sum_probs=43.3
Q ss_pred ccCCCCCCcee-eCceeee---eEEecCcEEc-ceEEee-------------------ceEcCCCEECCCCEEe-eeeeC
Q 017030 304 TSRRNLPPSKI-DDSKIVD---SIISHGSFIT-SSFIEH-------------------SVVGIRSRINANVHLK-VSPAN 358 (378)
Q Consensus 304 ~~~~i~~~~~i-~~~~i~~---s~Ig~~~~I~-~~~i~~-------------------SiI~~~~~Ig~~~~i~-~sIi~ 358 (378)
.++.|+++++| .++.|.+ ..||+||.|+ ++.|.+ ++||++|.||.||.|. ++.|+
T Consensus 75 ~~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG 154 (195)
T 3nz2_A 75 KTIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYTASHSLDYRRRQAWETICKPIVIEDDVWIGGNVVINQGVTIG 154 (195)
T ss_dssp TTEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEECEECCSSGGGTTTCCCEECCEEECTTCEECTTCEECTTCEEC
T ss_pred CCeEECCCcEECcCCEEecCceEEECCCCEECCCCEEecCCCCcccccccccceecCCeEECCCCEEcCCCEECCCCEEC
Confidence 35556666666 3555532 3788888888 776644 4677777777776663 46666
Q ss_pred CCCeEeeeeeeeee
Q 017030 359 PLCRRIWKCSSLCS 372 (378)
Q Consensus 359 ~~~~~~~~~~~~~~ 372 (378)
+++.|+.++.+..+
T Consensus 155 ~~~vIgagsvV~~d 168 (195)
T 3nz2_A 155 ARSVVAANSVVNQD 168 (195)
T ss_dssp TTCEECTTCEECSC
T ss_pred CCCEECCCCEEccc
Confidence 66666666655444
No 111
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=98.33 E-value=8.1e-07 Score=79.25 Aligned_cols=51 Identities=14% Similarity=0.018 Sum_probs=29.0
Q ss_pred eeEEecCcEEc-ceEEe-eceEcCCCEECCCCEE--------------eeeeeCCCCeEeeeeeeee
Q 017030 321 DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHL--------------KVSPANPLCRRIWKCSSLC 371 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i~-~SiI~~~~~Ig~~~~i--------------~~sIi~~~~~~~~~~~~~~ 371 (378)
++.||+||.|+ ++.|. ++.||++|+|++++.| .+++|++++.|+++|.+..
T Consensus 34 ~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~ 100 (266)
T 3r0s_A 34 DAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINS 100 (266)
T ss_dssp TCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTCEECTTCEEEC
T ss_pred CCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEECCCCEECCceEecC
Confidence 44555555555 45444 4666666666666666 3566666666666665543
No 112
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=98.32 E-value=1.1e-06 Score=74.84 Aligned_cols=68 Identities=9% Similarity=-0.081 Sum_probs=38.9
Q ss_pred ccCCCCCCcee-eCceeee---eEEecCcEEc-ceEEee-------------------ceEcCCCEECCCCEEe-eeeeC
Q 017030 304 TSRRNLPPSKI-DDSKIVD---SIISHGSFIT-SSFIEH-------------------SVVGIRSRINANVHLK-VSPAN 358 (378)
Q Consensus 304 ~~~~i~~~~~i-~~~~i~~---s~Ig~~~~I~-~~~i~~-------------------SiI~~~~~Ig~~~~i~-~sIi~ 358 (378)
.++.|+++++| .++.|.+ ..||++|.|+ ++.|.+ .+||++|.||.+|.|. ++.|+
T Consensus 73 ~~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG 152 (199)
T 3ftt_A 73 WNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIG 152 (199)
T ss_dssp TTEEECSSEEECTTEEEECSSCEEECSSEEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSEEECTTCEECTTCEEC
T ss_pred CCcEECCCeEECCCeEEecCCEEEECCCCEECCCCEEecCCCcCccccccccceecCCeEEcCCcEEcCCCEECCCCEEC
Confidence 34556666666 4555532 4777777777 666632 2466666666666554 35555
Q ss_pred CCCeEeeeeeeee
Q 017030 359 PLCRRIWKCSSLC 371 (378)
Q Consensus 359 ~~~~~~~~~~~~~ 371 (378)
+++.|+.++.+..
T Consensus 153 ~~~vIgagsvV~~ 165 (199)
T 3ftt_A 153 EGSVIGAGSVVTK 165 (199)
T ss_dssp TTCEECTTCEECS
T ss_pred CCCEECCCCEECc
Confidence 5555555554443
No 113
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=98.32 E-value=9.3e-07 Score=79.01 Aligned_cols=56 Identities=9% Similarity=0.083 Sum_probs=37.6
Q ss_pred CCCcEEccCCCCCCcee-eCceee-eeEEecCcEEc-ceEE-------------eeceEcCCCEECCCCEEe
Q 017030 298 ATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-------------EHSVVGIRSRINANVHLK 353 (378)
Q Consensus 298 ~~~~i~~~~~i~~~~~i-~~~~i~-~s~Ig~~~~I~-~~~i-------------~~SiI~~~~~Ig~~~~i~ 353 (378)
+.+.|.+++.|+++++| .++.|. ++.||++|.|+ ++.| .+++||++++|++++.|.
T Consensus 24 ~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG~~~~I~~~~~I~ 95 (270)
T 1j2z_A 24 EFCVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGEDNLIREFCMIN 95 (270)
T ss_dssp TTCEECTTCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEECSSCEECTTCEEC
T ss_pred CCCEECCCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEECCCCEECCCeEEc
Confidence 33444445555555555 456666 78888888888 7777 567777777777777776
No 114
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.31 E-value=8.5e-07 Score=80.06 Aligned_cols=74 Identities=14% Similarity=-0.042 Sum_probs=49.4
Q ss_pred CcEEccCCCCCCceee---Cceee-eeEEecCcEEc-ceEEe------------------eceEcCCCEECCCCEEe-ee
Q 017030 300 KPIYTSRRNLPPSKID---DSKIV-DSIISHGSFIT-SSFIE------------------HSVVGIRSRINANVHLK-VS 355 (378)
Q Consensus 300 ~~i~~~~~i~~~~~i~---~~~i~-~s~Ig~~~~I~-~~~i~------------------~SiI~~~~~Ig~~~~i~-~s 355 (378)
..|++.+.|++++.|+ ++.|. +++||+||.|+ ++.|- +++||++|.||.||.|. ++
T Consensus 191 v~I~p~a~IG~~v~I~hg~gvvIG~~~~IG~~v~I~~gvtIg~~~~~~~~~g~~i~~~~~~~~IGd~V~IGaga~Il~gv 270 (310)
T 3f1x_A 191 IDIHPGAQIGHHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKSFPLDNNGNPIKGIPRHPILEDDVIVYSNATILGRV 270 (310)
T ss_dssp CEECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEECC--------------CCSCEECTTCEECTTCEEESSC
T ss_pred cEECCCCEECCCcEECCCCCeEECCceEEcCCCEECCCCEECCCccccccccccccCCCCCCEECCCcEEcCCCEECCCc
Confidence 3455556666666661 33332 34455555554 44332 22799999999999998 79
Q ss_pred eeCCCCeEeeeeeeeeee
Q 017030 356 PANPLCRRIWKCSSLCSV 373 (378)
Q Consensus 356 Ii~~~~~~~~~~~~~~~~ 373 (378)
.||++++|+.++.+..+|
T Consensus 271 ~IGd~a~IGagsvV~~dV 288 (310)
T 3f1x_A 271 TIGKGATVGGNIWVTENV 288 (310)
T ss_dssp EECTTCEECSSCEECSCB
T ss_pred EECCCCEECCCCEECCcc
Confidence 999999999998887665
No 115
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.31 E-value=9.3e-07 Score=78.92 Aligned_cols=103 Identities=9% Similarity=-0.024 Sum_probs=70.5
Q ss_pred cceEEecCCHHHHHHHHHhcccCCCCcc-------ccCCCCcEEccCCCCCCceee---Cceee-eeEEecCcEEc-ceE
Q 017030 267 NDYWEDIGTIRSFFEANLALTAHPPMFS-------FYDATKPIYTSRRNLPPSKID---DSKIV-DSIISHGSFIT-SSF 334 (378)
Q Consensus 267 ~~~~~~i~t~~~~~~a~~~~l~~~~~~~-------~~~~~~~i~~~~~i~~~~~i~---~~~i~-~s~Ig~~~~I~-~~~ 334 (378)
+|||. ...|..+...+........ .......|.+.+.|++++.|+ ++.|. +++||+||.|+ ++.
T Consensus 122 ~G~~a----l~~yR~ah~l~~~~r~~l~~~l~~~~~~~~g~~I~p~a~IG~gv~I~~g~gvvIG~~~~IG~~v~I~~gvt 197 (289)
T 1t3d_A 122 KGFHA----LQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSVT 197 (289)
T ss_dssp HHHHH----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSCEECTTCEECSSCEECSCTTCEECTTCEECSSCEECTTCE
T ss_pred ccHHH----HHHHHHHHHHHHcChHHHHHHHHHhceeccceEEcCCCEEcCCEEECCCCceEECCCcEECCCCEEcCCcE
Confidence 66666 5566666655543321110 111234566777788888874 55664 68888888888 777
Q ss_pred Eee---------ceEcCCCEECCCCEEee-eeeCCCCeEeeeeeeeeee
Q 017030 335 IEH---------SVVGIRSRINANVHLKV-SPANPLCRRIWKCSSLCSV 373 (378)
Q Consensus 335 i~~---------SiI~~~~~Ig~~~~i~~-sIi~~~~~~~~~~~~~~~~ 373 (378)
|.+ ++||++|.||.||.|.+ +.|+++++|+.++.+..+|
T Consensus 198 Lg~~~~~~~~~~~~IGd~v~IGaga~Ilggv~IG~~a~IGagsvV~~dV 246 (289)
T 1t3d_A 198 LGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPV 246 (289)
T ss_dssp EECCSSSCSSCSCEECTTCEECTTCEEESSCEECTTCEECTTCEECSCB
T ss_pred ECCCccccCCCCeEECCCeEECCCCEEecCcEECCCCEECCCCEEccCC
Confidence 765 68999999999998874 7889999998888876554
No 116
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=98.30 E-value=7.1e-07 Score=82.60 Aligned_cols=66 Identities=14% Similarity=0.160 Sum_probs=35.1
Q ss_pred ccCCCCCCcee-eCcee-eeeEEecCcEEc-ceEE--------------------eeceEcCCCEECCCCEEe-----ee
Q 017030 304 TSRRNLPPSKI-DDSKI-VDSIISHGSFIT-SSFI--------------------EHSVVGIRSRINANVHLK-----VS 355 (378)
Q Consensus 304 ~~~~i~~~~~i-~~~~i-~~s~Ig~~~~I~-~~~i--------------------~~SiI~~~~~Ig~~~~i~-----~s 355 (378)
.++.|++++.| .++.| .++.||++|.|+ ++.| -+++||++|.||.++.|. ++
T Consensus 144 ~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~I~~~~fg~~~~~~~~~~i~~~g~v~IGd~v~Ig~~~~I~~~~~~~~ 223 (341)
T 3eh0_A 144 KNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGALDDT 223 (341)
T ss_dssp TTCEECTTCEECSSCEECTTCEECSSCEECTTCEEEECCSCEEEETTEEEECCCCCCEEECSSCEECTTCEEECCSSSCE
T ss_pred CCCEECCCcEECCCcEECCCCEECCccEEcCCcEECCccccccccCCccccccccCcEEECCCcEECCccEeeccccCce
Confidence 33333344444 34444 356666666666 5555 246677777777777773 44
Q ss_pred eeCCCCeEeeeeee
Q 017030 356 PANPLCRRIWKCSS 369 (378)
Q Consensus 356 Ii~~~~~~~~~~~~ 369 (378)
+|+++++|+.+|.+
T Consensus 224 ~Ig~~~~I~~~v~I 237 (341)
T 3eh0_A 224 IIGNGVIIDNQCQI 237 (341)
T ss_dssp EECTTCEECTTCEE
T ss_pred EeccceEECCCCEE
Confidence 55544444444433
No 117
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=98.30 E-value=8.5e-07 Score=78.45 Aligned_cols=65 Identities=22% Similarity=0.123 Sum_probs=52.8
Q ss_pred CCCCCCcee-eCcee---eeeEEecCcEEc-ceEEe----eceEcCCCEECCCCEEeee--------------------e
Q 017030 306 RRNLPPSKI-DDSKI---VDSIISHGSFIT-SSFIE----HSVVGIRSRINANVHLKVS--------------------P 356 (378)
Q Consensus 306 ~~i~~~~~i-~~~~i---~~s~Ig~~~~I~-~~~i~----~SiI~~~~~Ig~~~~i~~s--------------------I 356 (378)
..|++++.| +++.+ .++.||++|.|+ ++.|. ++.||++|.||++|.|.++ +
T Consensus 86 v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~v~ 165 (252)
T 3jqy_B 86 VRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKDII 165 (252)
T ss_dssp EEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCCEE
T ss_pred EEECCCCEECCceEEccCCEEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCCeE
Confidence 345666666 45555 268899999999 89998 8999999999999999885 8
Q ss_pred eCCCCeEeeeeeee
Q 017030 357 ANPLCRRIWKCSSL 370 (378)
Q Consensus 357 i~~~~~~~~~~~~~ 370 (378)
|+++|.|+.+|.+.
T Consensus 166 Igd~v~IG~~a~I~ 179 (252)
T 3jqy_B 166 ISSYVWVGRNVSIM 179 (252)
T ss_dssp ECSSCEECSSEEEC
T ss_pred EecCcEECCCCEEC
Confidence 88888888888664
No 118
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.29 E-value=1.4e-06 Score=80.43 Aligned_cols=112 Identities=17% Similarity=0.137 Sum_probs=65.0
Q ss_pred eEEEEecceEEecCC--HHHHHHHHHhccc-CC----------CCcc---------ccCCCCcEEccCCCCCCcee-eC-
Q 017030 261 LKAYLFNDYWEDIGT--IRSFFEANLALTA-HP----------PMFS---------FYDATKPIYTSRRNLPPSKI-DD- 316 (378)
Q Consensus 261 i~~~~~~~~~~~i~t--~~~~~~a~~~~l~-~~----------~~~~---------~~~~~~~i~~~~~i~~~~~i-~~- 316 (378)
++++....+|.+.+. |++|......+.. .. +... .+.+.+.|...+.|++++.| .+
T Consensus 163 ~~g~l~~~~Wt~~G~~~~~~f~~~~~~l~~~G~~~~~~~~dk~p~~~~~v~p~~gv~I~p~a~I~~~a~IG~gv~Ig~g~ 242 (387)
T 2rij_A 163 AFGLLSNVAWSDDKPIELEYLRANEMRLKMSNQYPKIDFVDKFPRFLAHIIPEDNTRILESSKVRMGASLAAGTTIMPGA 242 (387)
T ss_dssp HHHHSCCEEEETTEEECHHHHHHHHHHHHHTTCCCCCCEEESSCBGGGTCCCCTTCEESCGGGBBTTCBCCTTCEECSSS
T ss_pred hhccCceeeeccCcccCHHHHHHHHHHHHhcCCccceeecccccchhccccCCCCEEEcCCCEECCCeEEcCCCEEeCCe
Confidence 444445678999998 7888888887763 21 1110 11122222223333333333 11
Q ss_pred cee-----------------eeeEEecCcEEc-ceE----Eee-----ceEcCCCEECCCCEEeeeeeCCCCeEeeeeee
Q 017030 317 SKI-----------------VDSIISHGSFIT-SSF----IEH-----SVVGIRSRINANVHLKVSPANPLCRRIWKCSS 369 (378)
Q Consensus 317 ~~i-----------------~~s~Ig~~~~I~-~~~----i~~-----SiI~~~~~Ig~~~~i~~sIi~~~~~~~~~~~~ 369 (378)
+.| .+++||++|.|+ ++. +.+ ++||++|.||.|+. .++.|+++|.|+.++.+
T Consensus 243 a~Ig~nv~vIG~~~I~~~Ig~~vvIGdnv~Ig~ga~I~g~l~g~~~~~VvIGdnv~IGagAv-~GV~IGdgavIGAGsVV 321 (387)
T 2rij_A 243 SYVNFNAGTTGACMVEGRISSSAIVGEGSDVGGGASILGVLSGTSGNAISVGKACLLGANSV-TGIPLGDNCIVDAGIAV 321 (387)
T ss_dssp CEECTTCEESSCCEECSEECTTCEECTTCEECTTCEECCBCSSTTCCBCEECTTCEECTTCE-ECSCBCTTCEECTTCEE
T ss_pred eEECCCcEEECCEEEeeEECCCCEECCCCEECCCceEcceecCCCccCeEEeCCCEECCCCc-CCcEECCCCEECCCCEE
Confidence 111 135666677776 553 333 67888888888888 77888888888887776
Q ss_pred eeee
Q 017030 370 LCSV 373 (378)
Q Consensus 370 ~~~~ 373 (378)
..++
T Consensus 322 t~dv 325 (387)
T 2rij_A 322 LEGT 325 (387)
T ss_dssp CTTC
T ss_pred CCCc
Confidence 6544
No 119
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=98.29 E-value=1e-06 Score=78.96 Aligned_cols=49 Identities=12% Similarity=0.051 Sum_probs=22.5
Q ss_pred eeEEecCcEEc-ceEEe-eceEcCCCEECCCCEEe-eeeeCCCCeEeeeeee
Q 017030 321 DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHLK-VSPANPLCRRIWKCSS 369 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i~-~SiI~~~~~Ig~~~~i~-~sIi~~~~~~~~~~~~ 369 (378)
++.||++|.|+ ++.|. ++.|++++.|+.++.|. +++|++++.|+.+|.+
T Consensus 88 ~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~~~i~~~~~IG~~~~I~~~~~I 139 (273)
T 3fs8_A 88 DTIIGDNFQTGHKVTIRENTKIGNNVKIGTLSDIQHHVYIGNYVNIHSNVFV 139 (273)
T ss_dssp SCEECTTCEECSSCEECSSCEECSSCEECTTCEECSSCEECSSCEECTTCEE
T ss_pred CCEECCCCEECCceEECCCCEECCCCEECccceeCCceEECCceEECCCCEE
Confidence 44444444444 44442 44555555555444443 3444444444444444
No 120
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=98.29 E-value=5.8e-07 Score=76.05 Aligned_cols=73 Identities=18% Similarity=0.081 Sum_probs=40.9
Q ss_pred ccCCCCcEEccCCCCCCcee-eCceee-eeEEecCcEEc-ceEEee-ceEcCCCEECCCCEE-eeeeeCCCCeEeeee
Q 017030 295 FYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIEH-SVVGIRSRINANVHL-KVSPANPLCRRIWKC 367 (378)
Q Consensus 295 ~~~~~~~i~~~~~i~~~~~i-~~~~i~-~s~Ig~~~~I~-~~~i~~-SiI~~~~~Ig~~~~i-~~sIi~~~~~~~~~~ 367 (378)
++++.+.+.+++.|++++.| .++.|. ++.||+||.|+ ++.|.+ +.||++|.|++++.| .++.|++++.++.+|
T Consensus 5 ~I~p~a~I~~~~~Ig~~~~I~~~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~ig~~~ 82 (192)
T 3mqg_A 5 TIHPTAIVDEGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSM 82 (192)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEECTTCEECTTC
T ss_pred EECCCcEECCCCEECCCCEECCCCEECCCcEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECCCCEECCce
Confidence 44555566666666666666 344443 56677777776 555543 555666666555555 234455554444333
No 121
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=98.28 E-value=1.1e-06 Score=79.21 Aligned_cols=56 Identities=20% Similarity=0.210 Sum_probs=24.2
Q ss_pred CCCCcEEccCCCCCCcee-eCceee-eeEEecCcEEc-ceEEe-eceEcCCCEECCCCEE
Q 017030 297 DATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHL 352 (378)
Q Consensus 297 ~~~~~i~~~~~i~~~~~i-~~~~i~-~s~Ig~~~~I~-~~~i~-~SiI~~~~~Ig~~~~i 352 (378)
++.+.|.+.+.|++++.| ..+.|. ++.||+||.|+ ++.|. ++.||++|+|+++|.|
T Consensus 26 ~p~a~I~~~a~ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~I 85 (283)
T 4eqy_A 26 HPTAIIEPGAQLHETVEVGPYAIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASV 85 (283)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSEEEECSSCEECTTEEE
T ss_pred CCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEEcCCcEE
Confidence 333334434444444444 233332 34444444444 44443 3455555555555555
No 122
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.28 E-value=1.8e-06 Score=72.20 Aligned_cols=68 Identities=7% Similarity=-0.132 Sum_probs=42.3
Q ss_pred ccCCCCCCcee-eCceee---eeEEecCcEEc-ceEEe-------------------eceEcCCCEECCCCEEe-eeeeC
Q 017030 304 TSRRNLPPSKI-DDSKIV---DSIISHGSFIT-SSFIE-------------------HSVVGIRSRINANVHLK-VSPAN 358 (378)
Q Consensus 304 ~~~~i~~~~~i-~~~~i~---~s~Ig~~~~I~-~~~i~-------------------~SiI~~~~~Ig~~~~i~-~sIi~ 358 (378)
.+..|+++++| .++.+. +..||++|.|+ ++.|. ++.||++|.||.+|.|. ++.|+
T Consensus 71 ~~v~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~Ig~~a~I~~gv~IG 150 (182)
T 1ocx_A 71 YNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIG 150 (182)
T ss_dssp TTEEECSSEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTTCEECTTCEECTTCEEC
T ss_pred CCEEECCCcEEeCCeEEEeccceEEcCCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCCeEECCCCEECCCcEEC
Confidence 34556666666 355553 45778888887 77663 46677777777776664 45666
Q ss_pred CCCeEeeeeeeee
Q 017030 359 PLCRRIWKCSSLC 371 (378)
Q Consensus 359 ~~~~~~~~~~~~~ 371 (378)
+++.|+.++.+..
T Consensus 151 ~~~vIgagsvV~~ 163 (182)
T 1ocx_A 151 DNVVVASGAVVTK 163 (182)
T ss_dssp TTCEECTTCEECS
T ss_pred CCCEECCCCEECC
Confidence 6666665555443
No 123
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=98.27 E-value=9.3e-07 Score=82.22 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=16.0
Q ss_pred eeEEecCcEEc-ceEE-eeceEcCCCEECCCCEE
Q 017030 321 DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHL 352 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i-~~SiI~~~~~Ig~~~~i 352 (378)
++.||++|.|+ ++.| .+++||++|+|++++.|
T Consensus 150 ~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~I 183 (357)
T 4e79_A 150 NVEVGKDCFIDSYVTITGSSKLRDRVRIHSSTVI 183 (357)
T ss_dssp TCEECSSCEECTTCEECTTCEECSSCEECTTCEE
T ss_pred CCEECCCCEECCCcEEecccEEEeEeeccCCeEE
Confidence 44444444444 4444 44555555555555555
No 124
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=98.26 E-value=8.3e-07 Score=82.96 Aligned_cols=33 Identities=12% Similarity=-0.031 Sum_probs=18.0
Q ss_pred eceEcCCCEECCCCEE-----eeeeeCCCCeEeeeeee
Q 017030 337 HSVVGIRSRINANVHL-----KVSPANPLCRRIWKCSS 369 (378)
Q Consensus 337 ~SiI~~~~~Ig~~~~i-----~~sIi~~~~~~~~~~~~ 369 (378)
+++||++|.||.++.| .+++|+++++|+.+|.+
T Consensus 222 ~v~IGd~v~IGa~~~I~~g~~~~t~IG~~~~I~~~v~I 259 (372)
T 3pmo_A 222 GVTIGDDVEIGANTTIDRGALSDTLIGNGVKLDNQIMI 259 (372)
T ss_dssp CEEECSSCEECTTCEEECCSSSCEEECTTCEECTTCEE
T ss_pred CeEECCCCEECCCcEEccCcccceEECCCCEECCCCEE
Confidence 4566666666666666 34555555544444444
No 125
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=98.25 E-value=1.7e-06 Score=76.94 Aligned_cols=74 Identities=11% Similarity=0.018 Sum_probs=43.8
Q ss_pred CCCcEEccCCCCCCcee-eCceee-eeEEecCcEEc-ceEEe-eceEcCCCEECCCCEEe-------------eeeeCCC
Q 017030 298 ATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHLK-------------VSPANPL 360 (378)
Q Consensus 298 ~~~~i~~~~~i~~~~~i-~~~~i~-~s~Ig~~~~I~-~~~i~-~SiI~~~~~Ig~~~~i~-------------~sIi~~~ 360 (378)
+.+.+.+++.|++++.| ..+.|. ++.||++|.|+ ++.|. ++.||++|+|++++.|. +++|+++
T Consensus 10 p~a~I~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG~~ 89 (262)
T 2qia_A 10 PTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDR 89 (262)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEECSS
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCCEECCCcEECCCCEEecceEECcCCccccccCCccceEECCC
Confidence 33444444444444444 334443 56666666666 56555 67777777777777775 4667777
Q ss_pred CeEeeeeeeee
Q 017030 361 CRRIWKCSSLC 371 (378)
Q Consensus 361 ~~~~~~~~~~~ 371 (378)
+.|+++|.+..
T Consensus 90 ~~Ig~~~~I~~ 100 (262)
T 2qia_A 90 NRIRESVTIHR 100 (262)
T ss_dssp CEECTTCEEEC
T ss_pred ceeCCCCEEcC
Confidence 77777776654
No 126
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=98.25 E-value=1.3e-06 Score=78.09 Aligned_cols=67 Identities=6% Similarity=-0.135 Sum_probs=38.9
Q ss_pred cCCCCCCceee-Cceeee-eEEecCcEEc-ceEEe---------eceEcCCCEECCCCEEe-eeeeCCCCeEeeeeeeee
Q 017030 305 SRRNLPPSKID-DSKIVD-SIISHGSFIT-SSFIE---------HSVVGIRSRINANVHLK-VSPANPLCRRIWKCSSLC 371 (378)
Q Consensus 305 ~~~i~~~~~i~-~~~i~~-s~Ig~~~~I~-~~~i~---------~SiI~~~~~Ig~~~~i~-~sIi~~~~~~~~~~~~~~ 371 (378)
++.|++++.|. ++.|.+ +.||++|.|+ ++.+. +++||++|.||.+|.|. ++.|++++.|+.++.+..
T Consensus 133 ~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~g~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~ 212 (276)
T 3gos_A 133 GAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFVGARSEVVEGVIVEEGSVISMGVFIGQ 212 (276)
T ss_dssp TCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred CeEECCCCEECCCCEECCCCEECCCCEECCCCEECCccccCCCCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECC
Confidence 33444444442 444443 6666666666 55553 46777777777777665 466666666666665543
No 127
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=98.25 E-value=1.1e-06 Score=79.48 Aligned_cols=49 Identities=8% Similarity=-0.128 Sum_probs=33.6
Q ss_pred eEEecCcEEc-ceEEee---------ceEcCCCEECCCCEEe-eeeeCCCCeEeeeeeee
Q 017030 322 SIISHGSFIT-SSFIEH---------SVVGIRSRINANVHLK-VSPANPLCRRIWKCSSL 370 (378)
Q Consensus 322 s~Ig~~~~I~-~~~i~~---------SiI~~~~~Ig~~~~i~-~sIi~~~~~~~~~~~~~ 370 (378)
+.||++|.|+ ++.+.+ ++||++|.||.+|.|. ++.|++++.|+.++.+.
T Consensus 177 ~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~ 236 (304)
T 3eg4_A 177 AQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGVFIG 236 (304)
T ss_dssp CEECTTCEECTTCEECCCCSSTTCCCCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CccCCCcEECCCCEECCccccCccCCeEEcCCCEECCCCEEcCCcEECCCcEECCCCEEc
Confidence 5666666666 566655 7788888888777553 47777777777776665
No 128
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=98.24 E-value=1.6e-06 Score=76.99 Aligned_cols=32 Identities=22% Similarity=0.368 Sum_probs=15.9
Q ss_pred eeEEecCcEEc-ceEEe-------eceEcCCCEECCCCEE
Q 017030 321 DSIISHGSFIT-SSFIE-------HSVVGIRSRINANVHL 352 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i~-------~SiI~~~~~Ig~~~~i 352 (378)
++.||++|.|+ ++.|. +++||+++.|+.++.|
T Consensus 79 ~v~IG~~~~Ig~~~~I~~~~~~~~~~~IG~~~~I~~~~~I 118 (259)
T 3hsq_A 79 KTVIGDHNIFREYSNIHKGTKEDSPTVIGNKNYFMGNSHV 118 (259)
T ss_dssp CEEECSSCEECTTCEEECCSBTTBCEEECSSCEECTTCEE
T ss_pred cEEECCCcEECCCCEECCCccCCCcEEECCCcEEcCCcEE
Confidence 45555666665 55554 4444444444444333
No 129
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=98.23 E-value=1.8e-06 Score=76.88 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=14.7
Q ss_pred eeEEecCcEEc-ceEEe--------eceEcCCCEECCCCEE
Q 017030 321 DSIISHGSFIT-SSFIE--------HSVVGIRSRINANVHL 352 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i~--------~SiI~~~~~Ig~~~~i 352 (378)
++.||++|.|+ ++.|. +++||+++.|+.++.|
T Consensus 85 ~~~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I 125 (265)
T 4e6u_A 85 WLEIGNNNLIREHCSLHRGTVQDNALTKIGSHNLLMVNTHI 125 (265)
T ss_dssp EEEECSSCEECTTCEEECCCTTTTSEEEECSSCEECTTCEE
T ss_pred eEEECCCeEECCceEECcccccCCCceEEccCcEEeeeeEE
Confidence 34445555554 44443 2444444444444444
No 130
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=98.22 E-value=1.7e-06 Score=74.87 Aligned_cols=76 Identities=11% Similarity=-0.057 Sum_probs=48.3
Q ss_pred cCCCCcEEccCCCCCCcee-eCceee-eeEEecCcEEc-ceEEee-ceEcCCCEECCCCEEee-eeeCCCCeEeeeeeee
Q 017030 296 YDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIEH-SVVGIRSRINANVHLKV-SPANPLCRRIWKCSSL 370 (378)
Q Consensus 296 ~~~~~~i~~~~~i~~~~~i-~~~~i~-~s~Ig~~~~I~-~~~i~~-SiI~~~~~Ig~~~~i~~-sIi~~~~~~~~~~~~~ 370 (378)
+.+.+.+..++.|+.++.| .++.|. ++.||++|.|+ ++.+.+ +.||++|.||.++.|.. +.|++++.|+.++.+.
T Consensus 120 I~~~~~i~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~i~~~~~Ig~~~~igagsvv~ 199 (220)
T 4ea9_A 120 VMAGVAINADSWIGDLAIINTGAVVDHDCRLGAACHLGPASALAGGVSVGERAFLGVGARVIPGVTIGADTIVGAGGVVV 199 (220)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred EcCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEEcCCcEECCCCEECCCCEEc
Confidence 3344444555556666666 355554 57777777777 666655 77777777777777653 6666666666666554
Q ss_pred e
Q 017030 371 C 371 (378)
Q Consensus 371 ~ 371 (378)
.
T Consensus 200 ~ 200 (220)
T 4ea9_A 200 R 200 (220)
T ss_dssp S
T ss_pred c
Confidence 3
No 131
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.19 E-value=4.9e-06 Score=70.73 Aligned_cols=66 Identities=12% Similarity=-0.040 Sum_probs=37.1
Q ss_pred ccCCCCCCcee-eCceeee---eEEecCcEEc-ceEEee-------------------ceEcCCCEECCCCEEe-eeeeC
Q 017030 304 TSRRNLPPSKI-DDSKIVD---SIISHGSFIT-SSFIEH-------------------SVVGIRSRINANVHLK-VSPAN 358 (378)
Q Consensus 304 ~~~~i~~~~~i-~~~~i~~---s~Ig~~~~I~-~~~i~~-------------------SiI~~~~~Ig~~~~i~-~sIi~ 358 (378)
.+..|+++++| .++.+.+ ..||++|.|+ ++.|.. ++||++|.||.+|.|. ++.|+
T Consensus 74 ~~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG 153 (203)
T 1krr_A 74 SNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIG 153 (203)
T ss_dssp TTEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESEECCSSTTTCTTCCBEECCEEECTTCEECTTCEECTTCEEC
T ss_pred CCeEECCeeEECCccEEecccceEECCCCEECCCCEEecCCcccchhhcccCceeCCCcEECCCeEECCCCEEeCCeEEC
Confidence 45566666666 4555543 5778888887 776642 4555555555555544 24444
Q ss_pred CCCeEeeeeee
Q 017030 359 PLCRRIWKCSS 369 (378)
Q Consensus 359 ~~~~~~~~~~~ 369 (378)
+++.|+.++++
T Consensus 154 ~~~vIgagsvV 164 (203)
T 1krr_A 154 DNSVIGAGSIV 164 (203)
T ss_dssp TTCEECTTCEE
T ss_pred CCCEECCCCEE
Confidence 44444444433
No 132
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.19 E-value=2.6e-06 Score=73.38 Aligned_cols=17 Identities=12% Similarity=0.145 Sum_probs=9.2
Q ss_pred eeEEecCcEEc-ceEEee
Q 017030 321 DSIISHGSFIT-SSFIEH 337 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i~~ 337 (378)
++.||++|.|+ ++.|.+
T Consensus 100 ~i~IG~~~~Ig~~~~I~~ 117 (215)
T 2wlg_A 100 KISIGKDCMLAHGYEIRN 117 (215)
T ss_dssp EEEECTTCEECTTEEEES
T ss_pred CEEECCCCEEcCCEEEEC
Confidence 45555555555 555554
No 133
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=98.18 E-value=1.7e-06 Score=78.70 Aligned_cols=51 Identities=8% Similarity=-0.150 Sum_probs=33.8
Q ss_pred eeEEecCcEEc-ceEEee---------ceEcCCCEECCCCEEe-eeeeCCCCeEeeeeeeee
Q 017030 321 DSIISHGSFIT-SSFIEH---------SVVGIRSRINANVHLK-VSPANPLCRRIWKCSSLC 371 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i~~---------SiI~~~~~Ig~~~~i~-~sIi~~~~~~~~~~~~~~ 371 (378)
++.||++|.|+ ++.|.+ ++||++|.||.+|.|. ++.|++++.|+.++.+..
T Consensus 192 ~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~g~vIgagsvV~~ 253 (316)
T 3tk8_A 192 CAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIGARSEVVEGVIVEENSVISMGVYLGQ 253 (316)
T ss_dssp TCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred CCEECCCCEEcCCCEECCCcccccCCCcEECCCCEECCCCEEcCCCEECCCCEEcCCCEEcC
Confidence 45666666666 555554 6777777777777764 366777777777766664
No 134
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=98.16 E-value=2e-06 Score=76.70 Aligned_cols=52 Identities=17% Similarity=0.084 Sum_probs=43.6
Q ss_pred eEEecCcEEc-ceEEee---------ceEcCCCEECCCCEEeeeeeCCCCeEeeeeeeeeeeE
Q 017030 322 SIISHGSFIT-SSFIEH---------SVVGIRSRINANVHLKVSPANPLCRRIWKCSSLCSVI 374 (378)
Q Consensus 322 s~Ig~~~~I~-~~~i~~---------SiI~~~~~Ig~~~~i~~sIi~~~~~~~~~~~~~~~~~ 374 (378)
+.||++|.|+ ++.|-. .+||++|.||.|+.| ++.|+++|+|+-++.+..+.+
T Consensus 208 v~IGd~v~IgpGa~IgG~~~~~~~~~V~IGDnv~IGanAtI-gVtIGd~~iIGAGSVVtkdt~ 269 (332)
T 3fsy_A 208 VVVGDGSDVGGGASIMGTLSGGGTHVISIGKRCLLGANSGL-GISLGDDCVVEAGLYVTAGTR 269 (332)
T ss_dssp CEECTTCEECTTCEECSBCC---CCBCEECTTCEECTTCEE-CSCBCSSCEECTTCEECTTCE
T ss_pred eEECCCCEECCCCEEcCCCCCCCccceEECCCCEECCCCEE-eeEECCCCEECCCCEECCCCE
Confidence 6788888888 777754 899999999999999 888999999988888766543
No 135
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=98.16 E-value=2.1e-06 Score=76.86 Aligned_cols=11 Identities=27% Similarity=0.573 Sum_probs=6.5
Q ss_pred eeEEecCcEEc
Q 017030 321 DSIISHGSFIT 331 (378)
Q Consensus 321 ~s~Ig~~~~I~ 331 (378)
+++||+||.||
T Consensus 177 ~v~IGd~v~IG 187 (276)
T 3gos_A 177 PTIIEDNCFVG 187 (276)
T ss_dssp CCEECTTCEEC
T ss_pred CeEECCCCEEC
Confidence 35566666665
No 136
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=98.15 E-value=3.6e-06 Score=76.57 Aligned_cols=55 Identities=9% Similarity=0.093 Sum_probs=35.9
Q ss_pred Cceee-eeEEecCcEEc-ceEEe-----eceEcCCCEECCCCEEe--------------eeeeCCCCeEeeeeeee
Q 017030 316 DSKIV-DSIISHGSFIT-SSFIE-----HSVVGIRSRINANVHLK--------------VSPANPLCRRIWKCSSL 370 (378)
Q Consensus 316 ~~~i~-~s~Ig~~~~I~-~~~i~-----~SiI~~~~~Ig~~~~i~--------------~sIi~~~~~~~~~~~~~ 370 (378)
++.|. ++.||++|.|+ ++.|. +++||++++|++++.|. ..+|++++.|+++|.+.
T Consensus 49 ~~~I~g~~~IG~~~~I~~~a~I~~d~~g~~~IG~~~~Ig~~a~Ig~~~q~~~~~~~~~~~i~IG~~~~I~~~~~I~ 124 (305)
T 3t57_A 49 SSHVFGNTELGESCVLMTGAVVGDELPGYTFIGCNNIIGHHAVVGVKCQDLKYKHGDECFLCIGNNNEIREFCSIH 124 (305)
T ss_dssp TCEECSSEEECTTCEECTTCEECCSSSEEEEECSSCEECTTCEEEECCCCTTCCTTCCEEEEECSSCEECTTCEEE
T ss_pred CcEECCCcEECCCcEEccCcEeccCCCCceEECCceEECCccEeCccccccceecCCCceEEECCCcccCceEEEe
Confidence 44443 67778888887 67775 57888888888888772 14555555555555553
No 137
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=98.14 E-value=1.9e-06 Score=80.86 Aligned_cols=74 Identities=16% Similarity=0.003 Sum_probs=41.8
Q ss_pred CCCCcEEccCCCCCCcee-eCceee-eeEEecCcEEc-ceEE-eeceEcCCCEECCCCEE-eeeeeCCCCeEeeeeeee
Q 017030 297 DATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHL-KVSPANPLCRRIWKCSSL 370 (378)
Q Consensus 297 ~~~~~i~~~~~i~~~~~i-~~~~i~-~s~Ig~~~~I~-~~~i-~~SiI~~~~~Ig~~~~i-~~sIi~~~~~~~~~~~~~ 370 (378)
.+.+.+.+++.|++++.| .++.|. ++.||+||.|+ ++.| .++.||++|.|++++.| .+++|++++.|+.+|.+.
T Consensus 128 ~~~~~i~~~a~Ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig 206 (374)
T 2iu8_A 128 HPTAVIHPTAIIEDHVCIEPYAVVCQHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKRVIIQPGAVIG 206 (374)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSEEECTTCEECTTCEEE
T ss_pred CCCCEECCCcEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCceeeCCCcEEcccceECCCCEECCCCEEC
Confidence 344444455555555555 344443 56666666666 5555 45666666666666666 446666666666555553
No 138
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=98.13 E-value=1.6e-06 Score=78.57 Aligned_cols=10 Identities=40% Similarity=0.683 Sum_probs=4.8
Q ss_pred eEEecCcEEc
Q 017030 322 SIISHGSFIT 331 (378)
Q Consensus 322 s~Ig~~~~I~ 331 (378)
++||++|.||
T Consensus 203 v~IGd~v~IG 212 (304)
T 3eg4_A 203 TIIEDNCFIG 212 (304)
T ss_dssp CEECTTCEEC
T ss_pred eEEcCCCEEC
Confidence 4444444444
No 139
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=98.12 E-value=7e-07 Score=81.19 Aligned_cols=49 Identities=8% Similarity=0.135 Sum_probs=23.8
Q ss_pred eeEEecCcEEc-ceEE-eeceEcCCCEECCCCEEee---------eeeCCCCeEeeeeee
Q 017030 321 DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHLKV---------SPANPLCRRIWKCSS 369 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i-~~SiI~~~~~Ig~~~~i~~---------sIi~~~~~~~~~~~~ 369 (378)
++.||+||.|+ ++.| .++.||++|+|+.++.|.+ ++|+++|.|+.+|.+
T Consensus 174 g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IGd~v~IG~~a~I 233 (316)
T 3tk8_A 174 GAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIGARSEV 233 (316)
T ss_dssp TCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTTCEE
T ss_pred CCEECCCCEEccceEECCCCEECCCCEEcCCCEECCCcccccCCCcEECCCCEECCCCEE
Confidence 34455555554 3444 2345555555555555444 445555544444443
No 140
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=98.11 E-value=5.1e-06 Score=70.32 Aligned_cols=67 Identities=19% Similarity=0.096 Sum_probs=43.4
Q ss_pred cCCCCCCcee-eCcee-eeeEEecCcEEc-ceEEe----eceEcCCCEECCCCEEee-----------------eeeCCC
Q 017030 305 SRRNLPPSKI-DDSKI-VDSIISHGSFIT-SSFIE----HSVVGIRSRINANVHLKV-----------------SPANPL 360 (378)
Q Consensus 305 ~~~i~~~~~i-~~~~i-~~s~Ig~~~~I~-~~~i~----~SiI~~~~~Ig~~~~i~~-----------------sIi~~~ 360 (378)
++.|++++.| +++.| .+..||+||.|+ ++.|. +..||++|.|++++.|.+ ++|+++
T Consensus 12 ~v~I~~~a~I~~~a~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~Ig~~ 91 (194)
T 3tv0_A 12 SVKIAPGAVVCVESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMIIGTN 91 (194)
T ss_dssp CEEECTTCEECTTSEEESSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCEEECSS
T ss_pred CCEECCCCEEcCCCEEeCCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCceEECCc
Confidence 3344444444 33443 356677777777 66663 358999999999999954 567777
Q ss_pred CeEeeeeeeee
Q 017030 361 CRRIWKCSSLC 371 (378)
Q Consensus 361 ~~~~~~~~~~~ 371 (378)
+.|+.+|.+..
T Consensus 92 ~~i~~~~~i~~ 102 (194)
T 3tv0_A 92 NVFEVGCYSQA 102 (194)
T ss_dssp CEECTTCEECC
T ss_pred ceEecceeEee
Confidence 77766655543
No 141
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=98.11 E-value=3.8e-06 Score=75.96 Aligned_cols=74 Identities=20% Similarity=0.018 Sum_probs=46.6
Q ss_pred CcEEccCCCCCCceee---Cceee-eeEEecCcEEc-ceEEe-----------------eceEcCCCEECCCCEEee-ee
Q 017030 300 KPIYTSRRNLPPSKID---DSKIV-DSIISHGSFIT-SSFIE-----------------HSVVGIRSRINANVHLKV-SP 356 (378)
Q Consensus 300 ~~i~~~~~i~~~~~i~---~~~i~-~s~Ig~~~~I~-~~~i~-----------------~SiI~~~~~Ig~~~~i~~-sI 356 (378)
..|.+.+.|++++.|+ ++.|. ++.||+||.|+ ++.|- +++||++|.||.||.|.+ +.
T Consensus 164 v~I~p~a~IG~~v~I~~g~gvvIG~~~~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~~~~~IGd~v~IGaga~Ilggv~ 243 (313)
T 3q1x_A 164 IDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLGNII 243 (313)
T ss_dssp CEECTTCEECSSCEESSCTTCEECTTCEECSSCEECTTCEEECCCCCCTTCCCCCCSSCSCEECSSCEECTTCEEESSCE
T ss_pred eEECCCCEECCCEEECCCCceEECCCcEECCCCEECCCcEEeCCcEECCCceEcCCCccCCEECCCCEECCCCEECCCcE
Confidence 3445555555555551 23332 34555555554 44432 348899999999998764 88
Q ss_pred eCCCCeEeeeeeeeeee
Q 017030 357 ANPLCRRIWKCSSLCSV 373 (378)
Q Consensus 357 i~~~~~~~~~~~~~~~~ 373 (378)
||++|.|+.++.+..+|
T Consensus 244 IG~~a~IGagsvV~~dV 260 (313)
T 3q1x_A 244 VGSHVRIGANCWIDRDV 260 (313)
T ss_dssp ECSSEEECTTCEECSCB
T ss_pred ECCCCEECCCCEECCCc
Confidence 88888888888776654
No 142
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=98.09 E-value=2.9e-06 Score=76.25 Aligned_cols=54 Identities=15% Similarity=-0.029 Sum_probs=45.2
Q ss_pred eeEEecCcEEc-ceEEee---------ceEcCCCEECCCCEEeeeeeCCCCeEeeeeeeeeeeEe
Q 017030 321 DSIISHGSFIT-SSFIEH---------SVVGIRSRINANVHLKVSPANPLCRRIWKCSSLCSVIC 375 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i~~---------SiI~~~~~Ig~~~~i~~sIi~~~~~~~~~~~~~~~~~~ 375 (378)
.+.||++|.|+ ++.|-. ++||++|.||.|+.| ++.|+++|+|+.++.+..++..
T Consensus 230 gv~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdnv~IGAnAtI-GVtIGd~~iIGAGSVVtkdt~I 293 (347)
T 3r5d_A 230 GVFVGKGSDLGGGCSTMGTLSGGGNIVISVGEGCLIGANAGI-GIPLGDRNIVEAGLYITAGTKV 293 (347)
T ss_dssp TCEECTTEEECTTCEECC------CCCCEECTTCEECTTCEE-CSCBCTTCEECTTCEECTTCEE
T ss_pred eEEECCCCEECCCCEEccccCCCCccceEECCCCEECCCCEE-eeEECCCCEECCCCEECCCCEE
Confidence 37888888888 787754 799999999999999 9999999999998888766543
No 143
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=98.02 E-value=9.2e-06 Score=79.22 Aligned_cols=73 Identities=12% Similarity=0.097 Sum_probs=54.4
Q ss_pred CcEEccCCCCCCcee-eCceeeeeEEecCcEEc-ceEEeeceEcCCCEECCCCEEee--------eeeCCCCeEeeeeee
Q 017030 300 KPIYTSRRNLPPSKI-DDSKIVDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKV--------SPANPLCRRIWKCSS 369 (378)
Q Consensus 300 ~~i~~~~~i~~~~~i-~~~~i~~s~Ig~~~~I~-~~~i~~SiI~~~~~Ig~~~~i~~--------sIi~~~~~~~~~~~~ 369 (378)
+.+.+.+.++..+.| ..+.++||+||+||.|+ .+.+.+|+||+||.||.|+.+-| ++|+++|.||.+|.+
T Consensus 347 ~~i~~~~~i~~~v~IG~~v~ik~s~Ig~gskI~~~~~i~d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~~~iG~~~~l 426 (501)
T 3st8_A 347 TYLRPGTALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEYSNIGASSVFVNYDGTSKRRTTVGSHVRTGSDTMF 426 (501)
T ss_dssp EEECTTCEECTTCEEEETEEEESCEECTTCEEEESCEEESEEECSSCEECTTCEEECBCSSSBCCEEECTTCEECTTCEE
T ss_pred eeecCCcEEccccccCCeEEEccceecCCcEEeccceecCceEcCCCEECCCEEEEcccCCcccCCEECCCcEECCCCEE
Confidence 344445555566666 45677888888888888 68888888998888888888765 788888888777776
Q ss_pred eee
Q 017030 370 LCS 372 (378)
Q Consensus 370 ~~~ 372 (378)
.+-
T Consensus 427 ~~~ 429 (501)
T 3st8_A 427 VAP 429 (501)
T ss_dssp ESS
T ss_pred cCC
Confidence 543
No 144
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.00 E-value=6.3e-06 Score=73.40 Aligned_cols=34 Identities=29% Similarity=0.253 Sum_probs=22.8
Q ss_pred eEEecCcEEc-ceEEe-eceEcCCCEECCCCEEeee
Q 017030 322 SIISHGSFIT-SSFIE-HSVVGIRSRINANVHLKVS 355 (378)
Q Consensus 322 s~Ig~~~~I~-~~~i~-~SiI~~~~~Ig~~~~i~~s 355 (378)
+.||+||.|| ++.|. ++.||+||+||.|+.|...
T Consensus 217 ~~IGd~v~IGaga~Il~gv~IG~~a~IGagsvV~kd 252 (287)
T 3mc4_A 217 PKIRQGVLIGAGAKILGNIQVGQCSKIAAGSVVLKS 252 (287)
T ss_dssp CEECTTCEECTTCEEESSCEECTTCEECTTCEECSC
T ss_pred CEECCCCEECCCCEECCCcEECCCCEECCCCEEccc
Confidence 5777777777 65554 4677777777777776643
No 145
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=97.99 E-value=3e-06 Score=76.13 Aligned_cols=71 Identities=8% Similarity=-0.053 Sum_probs=47.9
Q ss_pred CCCcEEccCCCCCCceee-Ccee-eeeEEecCcEEc-ceEEeeceEcCCCEECCCCEEee---------eeeCCCCeEee
Q 017030 298 ATKPIYTSRRNLPPSKID-DSKI-VDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKV---------SPANPLCRRIW 365 (378)
Q Consensus 298 ~~~~i~~~~~i~~~~~i~-~~~i-~~s~Ig~~~~I~-~~~i~~SiI~~~~~Ig~~~~i~~---------sIi~~~~~~~~ 365 (378)
+.+.|...+.|++++.|. ++.| .++.||++|.|. ++.+ .++||++|.|++||.|.+ ++|+++|.||.
T Consensus 189 P~AvI~~GA~IGeGv~Igp~a~Vn~na~IGdg~iI~~~a~i-gv~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdnv~IGA 267 (347)
T 3r5d_A 189 DTARVRLGAYIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSA-GVFVGKGSDLGGGCSTMGTLSGGGNIVISVGEGCLIGA 267 (347)
T ss_dssp SGGGBBTTEEECTTEEECTTCEECTTEEESSSEEECSEECT-TCEECTTEEECTTCEECC------CCCCEECTTCEECT
T ss_pred CcCEECCCCEECCCCEECCCCEECCCCEECCCcEEcCCceE-eEEECCCCEECCCCEEccccCCCCccceEECCCCEECC
Confidence 333444444444444442 2333 256667777776 4444 489999999999999976 79999999988
Q ss_pred eeee
Q 017030 366 KCSS 369 (378)
Q Consensus 366 ~~~~ 369 (378)
+|.+
T Consensus 268 nAtI 271 (347)
T 3r5d_A 268 NAGI 271 (347)
T ss_dssp TCEE
T ss_pred CCEE
Confidence 8888
No 146
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=97.99 E-value=9.3e-06 Score=68.31 Aligned_cols=64 Identities=8% Similarity=-0.058 Sum_probs=37.6
Q ss_pred cCCCCCCceeeCceeeeeEEecCcEEc-ceEEeec---eEcCCCEECCCCEE-------------------eeeeeCCCC
Q 017030 305 SRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIEHS---VVGIRSRINANVHL-------------------KVSPANPLC 361 (378)
Q Consensus 305 ~~~i~~~~~i~~~~i~~s~Ig~~~~I~-~~~i~~S---iI~~~~~Ig~~~~i-------------------~~sIi~~~~ 361 (378)
++.|.++.++.-. .++.||++|.|+ ++.|.++ .||++|.||++|.| ..++|+++|
T Consensus 62 ~~~I~~~~~~~~g--~~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v 139 (188)
T 3srt_A 62 QINVEQNIRCDYG--YNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNV 139 (188)
T ss_dssp CEEECSCEEESSS--TTEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSC
T ss_pred CCEEcCCEEEEeC--CCeEECCcccccCceEEecCCceEECCeeEECCCcEEeeCCccCchhhccccceECCCcEECCCc
Confidence 3444455444100 356666666666 5666543 67888888888877 345566666
Q ss_pred eEeeeeeee
Q 017030 362 RRIWKCSSL 370 (378)
Q Consensus 362 ~~~~~~~~~ 370 (378)
.|+.+|.+.
T Consensus 140 ~IG~~~~I~ 148 (188)
T 3srt_A 140 WIGGGVIIT 148 (188)
T ss_dssp EECTTCEEC
T ss_pred EEcCCCEEC
Confidence 666655554
No 147
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=97.96 E-value=1.2e-05 Score=69.35 Aligned_cols=37 Identities=11% Similarity=-0.069 Sum_probs=26.4
Q ss_pred eceEcCCCEECCCCEEe-eeeeCCCCeEeeeeeeeeee
Q 017030 337 HSVVGIRSRINANVHLK-VSPANPLCRRIWKCSSLCSV 373 (378)
Q Consensus 337 ~SiI~~~~~Ig~~~~i~-~sIi~~~~~~~~~~~~~~~~ 373 (378)
+++||++|.||.||.|. ++.|+++|.|+.++.+..+|
T Consensus 119 ~v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~~dV 156 (220)
T 4hur_A 119 DIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKNV 156 (220)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEECSCB
T ss_pred CeEECCCcEECCCCEEeCCCEECCCCEEcCCCEEcccC
Confidence 35688888888887776 47777777777777765543
No 148
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=97.95 E-value=1.2e-05 Score=69.25 Aligned_cols=65 Identities=8% Similarity=-0.078 Sum_probs=46.6
Q ss_pred CCCCCCcee-eCceee----eeEEecCcEEcceEE-----eeceEcCCCEECCCCEEeee--------------------
Q 017030 306 RRNLPPSKI-DDSKIV----DSIISHGSFITSSFI-----EHSVVGIRSRINANVHLKVS-------------------- 355 (378)
Q Consensus 306 ~~i~~~~~i-~~~~i~----~s~Ig~~~~I~~~~i-----~~SiI~~~~~Ig~~~~i~~s-------------------- 355 (378)
..|++++.| .++.+. ++.||++|.|+.+.+ .+++||++|.|++++.|.++
T Consensus 59 v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~~~~~h~~~~~~~~~~~~~~~~v 138 (215)
T 2wlg_A 59 LFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIRNTDMHPIYSLENGERINHGKDV 138 (215)
T ss_dssp EEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEESCCSSCEEETTTCBBCCCCCCE
T ss_pred EEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEECCCCcccccccccccccCCCCe
Confidence 556677777 346665 388899999984334 57889999999999888863
Q ss_pred eeCCCCeEeeeeeee
Q 017030 356 PANPLCRRIWKCSSL 370 (378)
Q Consensus 356 Ii~~~~~~~~~~~~~ 370 (378)
+|+++|.|+.+|.+.
T Consensus 139 ~Igd~v~IG~~~~I~ 153 (215)
T 2wlg_A 139 IIGNHVWLGRNVTIL 153 (215)
T ss_dssp EECTTCEECTTCEEC
T ss_pred EECCCcEECCCCEEC
Confidence 667766666666554
No 149
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=97.94 E-value=8e-06 Score=73.70 Aligned_cols=32 Identities=13% Similarity=0.282 Sum_probs=17.2
Q ss_pred EEecCcEEc-ceEEe-eceEcCCCEECCCCEEee
Q 017030 323 IISHGSFIT-SSFIE-HSVVGIRSRINANVHLKV 354 (378)
Q Consensus 323 ~Ig~~~~I~-~~~i~-~SiI~~~~~Ig~~~~i~~ 354 (378)
+||+||.|| ++.|. ++.||+||+||.|+.|..
T Consensus 253 ~IGd~V~IGaga~Il~gv~IGd~a~IGagsvV~~ 286 (310)
T 3f1x_A 253 ILEDDVIVYSNATILGRVTIGKGATVGGNIWVTE 286 (310)
T ss_dssp EECTTCEECTTCEEESSCEECTTCEECSSCEECS
T ss_pred EECCCcEEcCCCEECCCcEECCCCEECCCCEECC
Confidence 455555555 54444 555555555555555543
No 150
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=97.92 E-value=1.1e-05 Score=68.45 Aligned_cols=32 Identities=9% Similarity=0.270 Sum_probs=17.4
Q ss_pred eeEEecCcEEc-ceEEee---ceEcCCCEECCCCEE
Q 017030 321 DSIISHGSFIT-SSFIEH---SVVGIRSRINANVHL 352 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i~~---SiI~~~~~Ig~~~~i 352 (378)
++.||+||.|+ ++.|.+ ..||++|.||++|.|
T Consensus 74 ~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I 109 (199)
T 3ftt_A 74 NVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGF 109 (199)
T ss_dssp TEEECSSEEECTTEEEECSSCEEECSSEEECTTCEE
T ss_pred CcEECCCeEECCCeEEecCCEEEECCCCEECCCCEE
Confidence 44455555554 444432 266666666666666
No 151
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=97.90 E-value=1.6e-05 Score=67.29 Aligned_cols=34 Identities=15% Similarity=0.203 Sum_probs=20.4
Q ss_pred eeEEecCcEEc-ceEEee---ceEcCCCEECCCCEEee
Q 017030 321 DSIISHGSFIT-SSFIEH---SVVGIRSRINANVHLKV 354 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i~~---SiI~~~~~Ig~~~~i~~ 354 (378)
++.||+||.|+ ++.|.+ .+||++|.||++|.|..
T Consensus 76 ~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~~ 113 (195)
T 3nz2_A 76 TIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYT 113 (195)
T ss_dssp TEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEEC
T ss_pred CeEECCCcEECcCCEEecCceEEECCCCEECCCCEEec
Confidence 44555555555 455532 26777777777776643
No 152
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=97.88 E-value=1.3e-05 Score=70.83 Aligned_cols=55 Identities=16% Similarity=0.100 Sum_probs=40.0
Q ss_pred cEEccCCCCCCcee-eCceeee---------eEEecCcEEc-ceEEe-eceEcCCCEECCCCEEeee
Q 017030 301 PIYTSRRNLPPSKI-DDSKIVD---------SIISHGSFIT-SSFIE-HSVVGIRSRINANVHLKVS 355 (378)
Q Consensus 301 ~i~~~~~i~~~~~i-~~~~i~~---------s~Ig~~~~I~-~~~i~-~SiI~~~~~Ig~~~~i~~s 355 (378)
.|..+++|+.+|.| .++++.+ ++||+||.|| ++.|. ++.||++|+||.|+.|...
T Consensus 159 vIG~~~~IG~~v~I~~gvtig~~~~~~~~~~~~IGd~v~IGaga~Il~gv~IG~~a~IGagsvV~~d 225 (267)
T 1ssq_A 159 VVGETSVIENDVSILQGVTLGGTGKESGDRHPKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLNP 225 (267)
T ss_dssp EECTTCEECTTCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTTCEECTTCEECSC
T ss_pred EECCeeEECCCCEEcCCcEECCCcccCCCCCeEECCCeEEcCCCEEeCCcEECCCCEECCCCEEccC
Confidence 34445556666666 3555544 5899999999 87775 6889999999999988765
No 153
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=97.86 E-value=1.6e-05 Score=70.95 Aligned_cols=54 Identities=17% Similarity=0.105 Sum_probs=37.7
Q ss_pred EEccCCCCCCcee-eCceeee---------eEEecCcEEc-ceEEe-eceEcCCCEECCCCEEeee
Q 017030 302 IYTSRRNLPPSKI-DDSKIVD---------SIISHGSFIT-SSFIE-HSVVGIRSRINANVHLKVS 355 (378)
Q Consensus 302 i~~~~~i~~~~~i-~~~~i~~---------s~Ig~~~~I~-~~~i~-~SiI~~~~~Ig~~~~i~~s 355 (378)
|..+++|+.+|.| .++++.+ ++||+||.|| ++.|. ++.||++|+||.|+.|...
T Consensus 180 IG~~~~IG~~v~I~~gvtLg~~~~~~~~~~~~IGd~v~IGaga~Ilggv~IG~~a~IGagsvV~~d 245 (289)
T 1t3d_A 180 VGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQP 245 (289)
T ss_dssp ECTTCEECSSCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTTCEECTTCEECSC
T ss_pred ECCCcEECCCCEEcCCcEECCCccccCCCCeEECCCeEECCCCEEecCcEECCCCEECCCCEEccC
Confidence 3344555555555 3455543 6899999999 87665 6788888888888888764
No 154
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=97.83 E-value=2.6e-05 Score=65.69 Aligned_cols=32 Identities=16% Similarity=0.260 Sum_probs=20.2
Q ss_pred eeEEecCcEEc-ceEEe---eceEcCCCEECCCCEE
Q 017030 321 DSIISHGSFIT-SSFIE---HSVVGIRSRINANVHL 352 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i~---~SiI~~~~~Ig~~~~i 352 (378)
++.||++|.|+ ++.|. +..||++|.||++|.|
T Consensus 78 ~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I 113 (190)
T 3hjj_A 78 NIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHI 113 (190)
T ss_dssp TEEECTTCEECTTCEEECSSCEEECTTCEECTTCEE
T ss_pred ceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEE
Confidence 44555555555 45553 4467777777777777
No 155
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=97.81 E-value=2.1e-05 Score=70.20 Aligned_cols=71 Identities=11% Similarity=0.054 Sum_probs=44.0
Q ss_pred CCcEEccCCCCCCcee-eCceee-------eeEEecCcEEcceEEeeceEcCCCEECCCCEEee---------eeeCCCC
Q 017030 299 TKPIYTSRRNLPPSKI-DDSKIV-------DSIISHGSFITSSFIEHSVVGIRSRINANVHLKV---------SPANPLC 361 (378)
Q Consensus 299 ~~~i~~~~~i~~~~~i-~~~~i~-------~s~Ig~~~~I~~~~i~~SiI~~~~~Ig~~~~i~~---------sIi~~~~ 361 (378)
...|.+.+.|.++++| +++.|- ++.|+.+|.|.+....++.||++|.|++||.|.. ++|+++|
T Consensus 161 gv~I~P~AvI~~gA~IGeGv~Igp~~fVniga~Ig~g~~In~~i~iGv~IGd~v~IgpGa~IgG~~~~~~~~~V~IGDnv 240 (332)
T 3fsy_A 161 GVRIADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGTLSGGGTHVISIGKRC 240 (332)
T ss_dssp TCEESCGGGBBTTEEECTTCEECTTCEECTTEEESSCCEECSEECTTCEECTTCEECTTCEECSBCC---CCBCEECTTC
T ss_pred CcEECCcCEECCCCEECCCCEEccccEEEECCeECcCCEECCceecceEECCCCEECCCCEEcCCCCCCCccceEECCCC
Confidence 3444455555555555 333332 3344444444311112478999999999999976 8888888
Q ss_pred eEeeeeee
Q 017030 362 RRIWKCSS 369 (378)
Q Consensus 362 ~~~~~~~~ 369 (378)
.|+.+|.|
T Consensus 241 ~IGanAtI 248 (332)
T 3fsy_A 241 LLGANSGL 248 (332)
T ss_dssp EECTTCEE
T ss_pred EECCCCEE
Confidence 88888887
No 156
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=97.80 E-value=3.9e-05 Score=65.82 Aligned_cols=34 Identities=6% Similarity=-0.068 Sum_probs=20.2
Q ss_pred ceEcCCCEECCCCEEe-eeeeCCCCeEeeeeeeee
Q 017030 338 SVVGIRSRINANVHLK-VSPANPLCRRIWKCSSLC 371 (378)
Q Consensus 338 SiI~~~~~Ig~~~~i~-~sIi~~~~~~~~~~~~~~ 371 (378)
++||++|.||.+|.|. ++.|+++|.|+-++.+..
T Consensus 112 v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~~ 146 (212)
T 3eev_A 112 TIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVTK 146 (212)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred eEECCCCEECCCCEEcCCCEECCCCEECCCCEEcc
Confidence 5666666666666665 355555555555555543
No 157
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=97.72 E-value=2.8e-05 Score=71.82 Aligned_cols=13 Identities=31% Similarity=0.049 Sum_probs=6.0
Q ss_pred EEEEeHHHHHHHH
Q 017030 225 VYLFKKEILLNLL 237 (378)
Q Consensus 225 iy~~~~~~l~~~l 237 (378)
++-++++.+..++
T Consensus 82 ~~~~~~~~~~~~~ 94 (387)
T 2rij_A 82 VQTLKLEDIDFAL 94 (387)
T ss_dssp EEECCHHHHHHHH
T ss_pred eEeCCHHHHHHHH
Confidence 3444555554443
No 158
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=97.70 E-value=4.5e-05 Score=64.79 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=22.0
Q ss_pred eeEEecCcEEc-ceEEee---ceEcCCCEECCCCEEe
Q 017030 321 DSIISHGSFIT-SSFIEH---SVVGIRSRINANVHLK 353 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i~~---SiI~~~~~Ig~~~~i~ 353 (378)
+..||+||.|+ ++.|.+ ..||++|.||++|.|.
T Consensus 75 ~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~ 111 (203)
T 1krr_A 75 NIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLS 111 (203)
T ss_dssp TEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEE
T ss_pred CeEECCeeEECCccEEecccceEECCCCEECCCCEEe
Confidence 55666666666 565554 5777777777777664
No 159
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=97.66 E-value=0.00022 Score=69.51 Aligned_cols=172 Identities=17% Similarity=0.210 Sum_probs=101.3
Q ss_pred cceeEEEEcCCCCcccccccccCcccceeec---Ceeeeeeeehhhhhh-cCCc-EEEEEee-cChhhHHHHHHhhccCC
Q 017030 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIG---GAYRLIDVPMSNCIN-SGIN-KVYILTQ-YNSASLNRHLARAYNYG 80 (378)
Q Consensus 7 ~~~~avIla~G~g~rl~plt~~~pK~llpi~---g~~pli~~~l~~l~~-~gi~-~I~iv~~-~~~~~i~~~l~~~~~~~ 80 (378)
.++.+|+||||.||||+ ...||.++|+. |+ +++++.++++.+ +|.. ..+|.++ ...+...+++.+ |.+.
T Consensus 113 ~kvavvllaGGlGTRLG---~~~pK~~lpv~~~s~k-s~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~-fgl~ 187 (630)
T 3ogz_A 113 CKTVFVLVAGGLGERLG---YSSIKVSLPVETATNT-TYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRE-LQLE 187 (630)
T ss_dssp GGEEEEEECCCEEGGGT---EEEEGGGSBSCTTTCC-BHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHH-TTCC
T ss_pred hhceEEEecCCcccccC---CCCCcccceecCCCCC-cHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHH-hCCC
Confidence 47889999999999997 78999999997 89 999999999876 3543 4566664 455678888876 5332
Q ss_pred CC-cc-cCCceEEEeccccCC---CcCC--CccccCcHHHHHHHHH--------------------HhcCCCCCCCCeEE
Q 017030 81 SG-VT-FGDGCVEVLAATQTP---GEAG--KRWFQGTADAVRQFHW--------------------LFEDPRNKVIEDVL 133 (378)
Q Consensus 81 ~~-~~-~~~~~i~i~~~~~~~---~~~~--~~~~~Gt~~al~~~~~--------------------~i~~~~~~~~~~~l 133 (378)
.. .. |....+-.+...... .+.+ ...+.|.|+....... .+++....+.+.+.
T Consensus 188 ~~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~ 267 (630)
T 3ogz_A 188 VPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIV 267 (630)
T ss_dssp CTTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEEE
T ss_pred cccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEE
Confidence 21 11 111111111100000 0001 1224466654433221 22222223468999
Q ss_pred EEcCCeEE-ecCHHHHHHHHHHcCCcEEEEEeecCCCCCCcceEEEE--CCCCCE
Q 017030 134 ILSGDHLY-RMDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKI--NNEGRV 185 (378)
Q Consensus 134 v~~gD~~~-~~d~~~~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~--d~~~~v 185 (378)
+.+.|.+. ..---.++.++.++++++.+-+.+... ...-|.+.. ..+|+.
T Consensus 268 v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~p--~E~vG~l~~~~~~dGk~ 320 (630)
T 3ogz_A 268 FIQDTNAGATITIPISLALSAEHSLDMNFTCIPRVP--KEPIGLLCRTKKNSGDP 320 (630)
T ss_dssp EECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECCCS--SCSSCEEEEEESSTTSC
T ss_pred EEccCCccccccCHHHhHHHHhcCCCEEEEEEECCC--CcceeeEEEEecCCCce
Confidence 99999943 222234678888899998888776532 344555443 345655
No 160
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=97.60 E-value=9e-05 Score=62.00 Aligned_cols=45 Identities=13% Similarity=0.119 Sum_probs=33.8
Q ss_pred eeEEecCcEEc-ceEEe-eceEcCCCEECCCCEEeeeeeCCCCeEeee
Q 017030 321 DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHLKVSPANPLCRRIWK 366 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i~-~SiI~~~~~Ig~~~~i~~sIi~~~~~~~~~ 366 (378)
++.||++|.|| ++.|. ++.||++|+||.|+.|... +.+++.++.+
T Consensus 130 ~v~IGd~v~IG~~~~I~~gv~IG~~~vIgagsvV~~~-vp~~~vv~G~ 176 (185)
T 2p2o_A 130 PVVIGHNVWIGGRAVINPGVTIGDNAVIASGAVVTKD-VPANAVVGGN 176 (185)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEECSC-BCTTEEEEET
T ss_pred CeEEcCCeEECCCCEECCCCEECCCCEECCCCEECCC-CCCCcEEEcc
Confidence 67899999999 77776 7888888888888888766 4455555543
No 161
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=97.54 E-value=4.6e-05 Score=68.90 Aligned_cols=9 Identities=22% Similarity=0.143 Sum_probs=3.7
Q ss_pred CCCCCCcee
Q 017030 306 RRNLPPSKI 314 (378)
Q Consensus 306 ~~i~~~~~i 314 (378)
..|++++.|
T Consensus 164 v~I~p~a~I 172 (313)
T 3q1x_A 164 IDIHPGASI 172 (313)
T ss_dssp CEECTTCEE
T ss_pred eEECCCCEE
Confidence 334444444
No 162
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=97.43 E-value=0.00013 Score=60.77 Aligned_cols=15 Identities=20% Similarity=0.361 Sum_probs=8.0
Q ss_pred ceEcCCCEECCCCEE
Q 017030 338 SVVGIRSRINANVHL 352 (378)
Q Consensus 338 SiI~~~~~Ig~~~~i 352 (378)
..||++|.|+++|.|
T Consensus 93 i~IG~~v~Ig~~v~I 107 (182)
T 1ocx_A 93 IRIGDNCMLAPGVHI 107 (182)
T ss_dssp EEECTTCEECTTCEE
T ss_pred eEEcCCcEEeCCcEE
Confidence 345555555555555
No 163
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=97.40 E-value=0.00027 Score=60.71 Aligned_cols=34 Identities=9% Similarity=-0.107 Sum_probs=20.2
Q ss_pred ceEcCCCEECCCCEEee-eeeCCCCeEeeeeeeee
Q 017030 338 SVVGIRSRINANVHLKV-SPANPLCRRIWKCSSLC 371 (378)
Q Consensus 338 SiI~~~~~Ig~~~~i~~-sIi~~~~~~~~~~~~~~ 371 (378)
++||++|.||.+|.|.. +.|++++.|+.++.+..
T Consensus 119 v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~~ 153 (219)
T 4e8l_A 119 IEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTK 153 (219)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred cEECCCeEECCCCEEcCCCEECCCCEECCCCEEcc
Confidence 55666666666666653 55555555555555443
No 164
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=97.30 E-value=0.00025 Score=60.49 Aligned_cols=33 Identities=9% Similarity=0.014 Sum_probs=17.4
Q ss_pred ceEcCCCEECCCCEEee-eeeCCCCeEeeeeeee
Q 017030 338 SVVGIRSRINANVHLKV-SPANPLCRRIWKCSSL 370 (378)
Q Consensus 338 SiI~~~~~Ig~~~~i~~-sIi~~~~~~~~~~~~~ 370 (378)
++||++|.||.++.|.. +.|++++.|+.++.+.
T Consensus 114 v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V~ 147 (209)
T 1mr7_A 114 TIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVV 147 (209)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred cEECCCCEEcCCCEEcCCCEECCCCEEcCCCEEc
Confidence 44555555555555542 4555555555554443
No 165
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=97.24 E-value=0.00045 Score=58.94 Aligned_cols=15 Identities=13% Similarity=0.022 Sum_probs=8.2
Q ss_pred eeEEecCcEEc-ceEE
Q 017030 321 DSIISHGSFIT-SSFI 335 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i 335 (378)
...||++|.|+ ++.|
T Consensus 56 ~i~IG~~~~Ig~~v~i 71 (212)
T 1xat_A 56 KLVIGSFCSIGSGAAF 71 (212)
T ss_dssp CEEECSSCEECTTCEE
T ss_pred CEEEcCCCEECCCCEE
Confidence 44566666665 5544
No 166
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=97.14 E-value=0.00056 Score=58.48 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=17.4
Q ss_pred eeEEecCcEEc-ceEEe-eceEcCCCEECCCCEEe
Q 017030 321 DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHLK 353 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i~-~SiI~~~~~Ig~~~~i~ 353 (378)
++.||++|.|| ++.|. ++.||++|+||.|+.|.
T Consensus 111 ~v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~ 145 (212)
T 3eev_A 111 DTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVT 145 (212)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CeEECCCCEECCCCEEcCCCEECCCCEECCCCEEc
Confidence 35666666666 44332 44555555555555544
No 167
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=97.14 E-value=0.00055 Score=58.90 Aligned_cols=32 Identities=19% Similarity=0.132 Sum_probs=14.6
Q ss_pred eEEecCcEEc-ceEEe-eceEcCCCEECCCCEEe
Q 017030 322 SIISHGSFIT-SSFIE-HSVVGIRSRINANVHLK 353 (378)
Q Consensus 322 s~Ig~~~~I~-~~~i~-~SiI~~~~~Ig~~~~i~ 353 (378)
++||++|.|| +|.|. ++.||++|.||.++.|.
T Consensus 120 v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~ 153 (220)
T 4hur_A 120 IEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVT 153 (220)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eEECCCcEECCCCEEeCCCEECCCCEEcCCCEEc
Confidence 4455555555 43332 34444444444444443
No 168
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=96.96 E-value=0.00025 Score=60.64 Aligned_cols=101 Identities=21% Similarity=0.188 Sum_probs=69.4
Q ss_pred cceeEEEEc--CCCCcccccccccCccccee----ecCeeeeeeeehhhhhhcCCcEE-EEEeecChhhHHHHHHhhccC
Q 017030 7 RTVAAVILG--GGAGTRLYPLTKQRAKPAVP----IGGAYRLIDVPMSNCINSGINKV-YILTQYNSASLNRHLARAYNY 79 (378)
Q Consensus 7 ~~~~avIla--~G~g~rl~plt~~~pK~llp----i~g~~pli~~~l~~l~~~gi~~I-~iv~~~~~~~i~~~l~~~~~~ 79 (378)
+.|.+||++ +..-|||. +.|-| ..++ ||++|+++.+..+++..+ ++++++.. .. . +
T Consensus 2 ~~~~~vip~k~g~~KtRL~-------~~l~~~~~~~l~~-~ll~~vl~~l~~~~~~~v~vvv~~~~~--~~----~-~-- 64 (211)
T 2i5e_A 2 NAMRAVIPYKKAGAKSRLS-------PVLSLQEREEFVE-LMLNQVISSLKGAGIEQVDILSPSVYG--LE----E-M-- 64 (211)
T ss_dssp CCCEEEEECCCTTTTGGGT-------TTSCHHHHHHHHH-HHHHHHHHHHHHTTCSEEEEEESSCTT--CS----S-C--
T ss_pred CceEEEEEeCCCCCccccC-------ccCCHHHHHHHHH-HHHHHHHHHHHHcCCceEEEEEcCcHH--HH----h-h--
Confidence 568999999 66778875 34433 6679 999999999999988898 88876532 11 0 0
Q ss_pred CCCcccCCceEEEeccccCCCcCCCccccCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCe-EEecC-HHHHHH
Q 017030 80 GSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQ 150 (378)
Q Consensus 80 ~~~~~~~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-~~~~d-~~~~l~ 150 (378)
++ +.++... .|.+.++..+...+ .+.++++.||+ ++..+ +..+++
T Consensus 65 -----~~---~~~v~~~-----------~gl~~sl~~a~~~~-------~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 65 -----TE---ARVLLDE-----------KDLNEALNRYLKEA-------EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp -----CS---SEEEECC-----------SCHHHHHHHHHHHC-------CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred -----cC---CEEEECC-----------CCHHHHHHHHHHhc-------CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 12 2232211 27889999887665 27899999999 44444 666655
No 169
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=96.25 E-value=0.003 Score=53.75 Aligned_cols=33 Identities=15% Similarity=-0.063 Sum_probs=26.3
Q ss_pred CCCEECCCCEEee-eeeCCCCeEeeeeeee-eeeE
Q 017030 342 IRSRINANVHLKV-SPANPLCRRIWKCSSL-CSVI 374 (378)
Q Consensus 342 ~~~~Ig~~~~i~~-sIi~~~~~~~~~~~~~-~~~~ 374 (378)
.+++||++|.|.. |+|.++++|+++|.+. +|+|
T Consensus 112 ~~v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V 146 (209)
T 1mr7_A 112 GDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVV 146 (209)
T ss_dssp CCEEECSSCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CCcEECCCCEEcCCCEEcCCCEECCCCEEcCCCEE
Confidence 3588999999976 8899999999999885 4444
No 170
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=96.15 E-value=0.0073 Score=51.67 Aligned_cols=35 Identities=20% Similarity=0.158 Sum_probs=21.3
Q ss_pred eeEEecCcEEc-ceEEe-eceEcCCCEECCCCEEeee
Q 017030 321 DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHLKVS 355 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i~-~SiI~~~~~Ig~~~~i~~s 355 (378)
+++||++|.|| ++.|. ++.||++++||.++.|...
T Consensus 118 ~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~~d 154 (219)
T 4e8l_A 118 DIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKN 154 (219)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEECSC
T ss_pred CcEECCCeEECCCCEEcCCCEECCCCEECCCCEEccc
Confidence 56777777777 55444 3556666666666665543
No 171
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=94.47 E-value=0.041 Score=46.68 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=22.3
Q ss_pred eeEEecCcEEc-ceEEe-eceEcCCCEECCCCEEeee
Q 017030 321 DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHLKVS 355 (378)
Q Consensus 321 ~s~Ig~~~~I~-~~~i~-~SiI~~~~~Ig~~~~i~~s 355 (378)
.+.||++|.|| ++.|. ++.||++|+||.++.|...
T Consensus 110 ~v~IG~~v~IG~~a~I~~gv~Ig~~~~IgagsvV~~~ 146 (212)
T 1xat_A 110 DTLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVTGD 146 (212)
T ss_dssp CEEECTTCEECTTCEECTTCEECTTCEECTTCEECSC
T ss_pred CeEECCCCEECCCCEEeCCCEECCCCEECCCCEEccc
Confidence 45667777776 55443 5666777777777766654
No 172
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=78.75 E-value=6.5 Score=32.88 Aligned_cols=48 Identities=19% Similarity=0.101 Sum_probs=37.5
Q ss_pred cCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEecC-HHHHHHHHHHcCCcEEE
Q 017030 108 QGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGADITI 161 (378)
Q Consensus 108 ~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~d-~~~~l~~h~~~~~~~ti 161 (378)
.|.+.+.-.+..... .+.++++.+|.+...+ +..+++...+.+.++.+
T Consensus 70 ~G~~~a~N~g~~~a~------g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~ 118 (240)
T 3bcv_A 70 AGLGMACNSGLDVAT------GEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVF 118 (240)
T ss_dssp CCHHHHHHHHHHHCC------SSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEE
T ss_pred CChHHHHHHHHHHcC------CCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEE
Confidence 488888888877765 4899999999988888 78888877665666543
No 173
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=78.68 E-value=21 Score=29.94 Aligned_cols=107 Identities=11% Similarity=0.105 Sum_probs=59.8
Q ss_pred eeecCeeeeeeeehhhhhhcCCc--EEEEEeecChhhHHHHHHhhccCCCCcccCCceEEEeccccCCCcCCCccccCcH
Q 017030 34 VPIGGAYRLIDVPMSNCINSGIN--KVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTA 111 (378)
Q Consensus 34 lpi~g~~pli~~~l~~l~~~gi~--~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~Gt~ 111 (378)
+|.-|....|..+|+.+.+.... +|+|+-.--.+...+.+.+... . ..+.++...... ........|.+
T Consensus 7 Ip~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~-~-------~~i~~i~~~~~~-~~~~~~n~G~~ 77 (255)
T 1qg8_A 7 MTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLN-D-------NRVRFYQSDISG-VKERTEKTRYA 77 (255)
T ss_dssp EEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGG-S-------TTEEEEECCCCS-HHHHHSSCHHH
T ss_pred EEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhh-c-------CCEEEEeccccc-ccccccccCHH
Confidence 34444435666777777664332 6666654333444444443211 0 124444332000 00000014788
Q ss_pred HHHHHHHHHhcCCCCCCCCeEEEEcCCeEEecC-HHHHHHHHHHc
Q 017030 112 DAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQS 155 (378)
Q Consensus 112 ~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~d-~~~~l~~h~~~ 155 (378)
.+...+.+..+ .+.++++.+|.+...+ +..+++.+.+.
T Consensus 78 ~a~N~gi~~a~------g~~i~~lD~Dd~~~~~~l~~~~~~~~~~ 116 (255)
T 1qg8_A 78 ALINQAIEMAE------GEYITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp HHHHHHHHHCC------CSEEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHcC------CCEEEEeCCCCccChHHHHHHHHHHHhC
Confidence 88888777664 4899999999999888 78888877654
No 174
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=73.33 E-value=4.3 Score=34.81 Aligned_cols=85 Identities=8% Similarity=-0.001 Sum_probs=53.9
Q ss_pred eeeeeehhhhhhcCCcEEEEEeecChhhH---HHHHHhhccCCCCcccCCceEEEeccccCCCcCCCccccCcHHHHHHH
Q 017030 41 RLIDVPMSNCINSGINKVYILTQYNSASL---NRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQF 117 (378)
Q Consensus 41 pli~~~l~~l~~~gi~~I~iv~~~~~~~i---~~~l~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~Gt~~al~~~ 117 (378)
+|+.++++.+...+...++++++.....+ .... +.+ +.+.+ |.. .|.+.++..+
T Consensus 38 ~ll~~tl~~~~~~~~~~vvvvt~~~~~~~~~~~~~~------~~~-------~~~~~--q~~--------~gLg~rl~~a 94 (242)
T 3cgx_A 38 HFVQDMLQGLARLHADLHICYVPGDADLPEKFKAWL------GPQ-------HMFAA--QQG--------LDLGERMKHA 94 (242)
T ss_dssp HHHHHHHHHHTTSSSEEEEEECCCCTTHHHHHHHHH------CTT-------SEEEE--CCS--------SSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCchhhhhhhhhhc------cCC-------cEEec--CCC--------CCHHHHHHHH
Confidence 79999999999988877766666544443 2221 111 11221 221 3788889888
Q ss_pred HHHh-cCCCCCCCCeEEEEcCCe--EEecCHHHHHHHH
Q 017030 118 HWLF-EDPRNKVIEDVLILSGDH--LYRMDYMDFVQNH 152 (378)
Q Consensus 118 ~~~i-~~~~~~~~~~~lv~~gD~--~~~~d~~~~l~~h 152 (378)
...+ .. ..+.++++.+|+ +...++.++++.+
T Consensus 95 ~~~~~~~----~~~~vliigaD~P~L~~~~l~~a~~~l 128 (242)
T 3cgx_A 95 MQKAFDD----GYDRVVLMGSDIPDYPCELVQKALNDL 128 (242)
T ss_dssp HHHHHHT----TCSEEEEECSSCTTCCHHHHHHHHHHT
T ss_pred HHHHHhC----CCCeEEEEcCCCCCCCHHHHHHHHHHh
Confidence 7765 21 147899999999 4444577777644
No 175
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=61.44 E-value=54 Score=30.63 Aligned_cols=105 Identities=10% Similarity=0.063 Sum_probs=62.0
Q ss_pred eeecCee-eeeeeehhhhhhcCC----cEEEEEeecChh-hHHHHHHhhccCCCCcccCCceEEEeccccCCCcCCCccc
Q 017030 34 VPIGGAY-RLIDVPMSNCINSGI----NKVYILTQYNSA-SLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWF 107 (378)
Q Consensus 34 lpi~g~~-pli~~~l~~l~~~gi----~~I~iv~~~~~~-~i~~~l~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~ 107 (378)
+|.-|.. ..|..+|+.+.+.-. .+|+||-..-.+ ...+.+++... .+.. .+.++.....
T Consensus 35 Ip~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~-----~~~~-~v~vi~~~~n--------- 99 (472)
T 1xhb_A 35 IVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVK-----KLKV-PVHVIRMEQR--------- 99 (472)
T ss_dssp EEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHH-----SSSS-CEEEEECSSC---------
T ss_pred EEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHH-----HCCC-cEEEEECCCC---------
Confidence 4556763 477777887766432 277777532221 22222222110 0110 1445443322
Q ss_pred cCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEecC-HHHHHHHHHHcCCcE
Q 017030 108 QGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGADI 159 (378)
Q Consensus 108 ~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~d-~~~~l~~h~~~~~~~ 159 (378)
.|-+.|...+..... .+.++++.+|.....+ +..+++.+.+....+
T Consensus 100 ~G~~~a~N~g~~~A~------gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~ 146 (472)
T 1xhb_A 100 SGLIRARLKGAAVSR------GQVITFLDAHCECTAGWLEPLLARIKHDRRTV 146 (472)
T ss_dssp CCHHHHHHHHHHHCC------SSEEEEEESSEEECTTCHHHHHHHHHHCTTEE
T ss_pred CChHHHHHHHHHhcc------CCeEEEECCCeEeCccHHHHHHHHHHhCCCEE
Confidence 478888888877765 4899999999998888 888888876655433
No 176
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=58.96 E-value=32 Score=32.63 Aligned_cols=99 Identities=8% Similarity=0.063 Sum_probs=59.3
Q ss_pred eeecCeee-eeeeehhhhhhcCC-c---EEEEEee-cChhhHHHHHHhhccCCCCcccCCceEEEeccccCCCcCCCccc
Q 017030 34 VPIGGAYR-LIDVPMSNCINSGI-N---KVYILTQ-YNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWF 107 (378)
Q Consensus 34 lpi~g~~p-li~~~l~~l~~~gi-~---~I~iv~~-~~~~~i~~~l~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~ 107 (378)
+|.-|... .|...|+.+.+.-. . +|+||-. .....+.+.+.+ + . .+.++.....
T Consensus 72 Ip~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~-~--------~--~v~vi~~~~n--------- 131 (501)
T 2ffu_A 72 ITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGK-I--------E--KVRVLRNDRR--------- 131 (501)
T ss_dssp EEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGG-B--------T--TEEEEECSSC---------
T ss_pred EEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhc-C--------C--CEEEEECCCC---------
Confidence 45556523 67777777665322 2 6766652 222233332211 1 0 1444432222
Q ss_pred cCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEecC-HHHHHHHHHHcCCc
Q 017030 108 QGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGAD 158 (378)
Q Consensus 108 ~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~d-~~~~l~~h~~~~~~ 158 (378)
.|-+.|...++.... .+.++++.+|.....+ +..+++...+....
T Consensus 132 ~G~~~A~N~G~~~A~------gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 177 (501)
T 2ffu_A 132 EGLMRSRVRGADAAQ------AKVLTFLDSHCECNEHWLEPLLERVAEDRTR 177 (501)
T ss_dssp CHHHHHHHHHHHHCC------SSEEEECCSSEEECTTCHHHHHHHHHHCTTE
T ss_pred cCHHHHHHHHHHhcC------CCEEEEECCCcccCccHHHHHHHHHHhCCCe
Confidence 478888888877765 4899999999988877 88888887765553
No 177
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=51.68 E-value=75 Score=30.89 Aligned_cols=104 Identities=8% Similarity=-0.014 Sum_probs=61.2
Q ss_pred ceeecCeeeeeeeehhhhhhcC---CcEEEEEeecChhhHHHHHHhhccCCCCcccCCceEEEeccccCCCcCCCccccC
Q 017030 33 AVPIGGAYRLIDVPMSNCINSG---INKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQG 109 (378)
Q Consensus 33 llpi~g~~pli~~~l~~l~~~g---i~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~G 109 (378)
++|.-|....|..+|+.+.+.. --+|+|+-....+...+.+.+. .. .. .+.++..... -.|
T Consensus 98 iIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~---~~--~~---~i~~i~~~~~--------~~g 161 (625)
T 2z86_A 98 VIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREF---ES--LL---NIKYVRQKDY--------GYQ 161 (625)
T ss_dssp EEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTT---TT--TS---CEEEEEECCC--------SCC
T ss_pred EEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHh---hh--cC---CeEEEEeCCC--------Ccc
Confidence 3455565456777777776642 3467666643334444444432 11 01 1333321111 125
Q ss_pred cHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEecC-HHHHHHHHHHcCCc
Q 017030 110 TADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGAD 158 (378)
Q Consensus 110 t~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~d-~~~~l~~h~~~~~~ 158 (378)
-+.++..+..... .+.++++.+|.+...+ +..+++.+.+....
T Consensus 162 ~~~a~N~g~~~a~------g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~ 205 (625)
T 2z86_A 162 LCAVRNLGLRAAK------YNYVAILDCDMAPNPLWVQSYMELLAVDDNV 205 (625)
T ss_dssp HHHHHHHHHHHCC------SSEEEEECTTEEECTTHHHHHHHHHHHCTTE
T ss_pred hhHHHHHHHHhCC------cCEEEEECCCCCCCHHHHHHHHHHHhcCCce
Confidence 7788877777664 4899999999999888 77888777665543
No 178
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=49.87 E-value=80 Score=30.50 Aligned_cols=102 Identities=9% Similarity=0.138 Sum_probs=59.2
Q ss_pred eeecCee-eeeeeehhhhhhcCC-c---EEEEEeec-ChhhHHHHHHhhccCCCCcccCCceEEEeccccCCCcCCCccc
Q 017030 34 VPIGGAY-RLIDVPMSNCINSGI-N---KVYILTQY-NSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWF 107 (378)
Q Consensus 34 lpi~g~~-pli~~~l~~l~~~gi-~---~I~iv~~~-~~~~i~~~l~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~ 107 (378)
+|.-|.. ..|..+|+.+.+.-. . +|+||-.. ....+.+.+.+.. . .+ ..+.++.....
T Consensus 118 Ip~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~--~---~~--~~v~vi~~~~n--------- 181 (570)
T 2d7i_A 118 IPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYM--A---LF--PSVRILRTKKR--------- 181 (570)
T ss_dssp EEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHH--T---TS--TTEEEEECSSC---------
T ss_pred EEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHH--H---hC--CeEEEEECCCC---------
Confidence 3555662 366677777665322 2 67776532 2222123332211 0 00 12445433222
Q ss_pred cCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEecC-HHHHHHHHHHcCC
Q 017030 108 QGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGA 157 (378)
Q Consensus 108 ~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~d-~~~~l~~h~~~~~ 157 (378)
.|-+.|...+..... .+.++++.+|.....+ +..+++...+...
T Consensus 182 ~G~~~A~N~G~~~A~------gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~ 226 (570)
T 2d7i_A 182 EGLIRTRMLGASVAT------GDVITFLDSHCEANVNWLPPLLDRIARNRK 226 (570)
T ss_dssp CCHHHHHHHHHHHCC------SSEEEECCSSEEECTTCSHHHHHHHHHCTT
T ss_pred CCHHHHHHHHHHhcC------CCEEEEEcCCccccccHHHHHHHHHHhCCC
Confidence 488888888877764 4899999999988887 7888887766443
No 179
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=40.24 E-value=1.1e+02 Score=29.68 Aligned_cols=99 Identities=18% Similarity=0.152 Sum_probs=57.3
Q ss_pred eeecCeeeeeeeehhhhhhcCC--cEEEEEeecChhhHHHHHHhhccCCCCcccCCceEEEeccccCCCcCCCccccCcH
Q 017030 34 VPIGGAYRLIDVPMSNCINSGI--NKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTA 111 (378)
Q Consensus 34 lpi~g~~pli~~~l~~l~~~gi--~~I~iv~~~~~~~i~~~l~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~Gt~ 111 (378)
+|.-|....|..+|+.+.+... -+|+|+-+.-.+...+.+.+.. .. . ..+.++. +. ..|.+
T Consensus 381 i~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~--~~---~--~~i~~~~--~~--------n~G~~ 443 (625)
T 2z86_A 381 IPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHY--AN---H--PRVRFIS--QK--------NKGIG 443 (625)
T ss_dssp EEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHH--TT---C--TTEEEEE--EC--------CCCHH
T ss_pred EeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHH--hh---C--CcEEEEe--CC--------CCCHH
Confidence 3444543567777777765432 2666665322222333333221 00 0 0134443 11 14888
Q ss_pred HHHHHHHHHhcCCCCCCCCeEEEEcCCeEEecC-HHHHHHHHHHc
Q 017030 112 DAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQS 155 (378)
Q Consensus 112 ~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~d-~~~~l~~h~~~ 155 (378)
.++..+..... .+.++++.+|.+...+ +..+++.+.+.
T Consensus 444 ~a~n~g~~~a~------g~~i~~ld~D~~~~~~~l~~~~~~~~~~ 482 (625)
T 2z86_A 444 SASNTAVRLCR------GFYIGQLDSDDFLEPDAVELCLDEFRKD 482 (625)
T ss_dssp HHHHHHHHHCC------SSEEEECCTTCEECTTHHHHHHHHHHHC
T ss_pred HHHHHHHHhcC------CCEEEEECCCcccChhHHHHHHHHHHhC
Confidence 88888877764 4899999999998888 77788766554
No 180
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=32.47 E-value=1.6e+02 Score=25.87 Aligned_cols=49 Identities=14% Similarity=0.030 Sum_probs=35.5
Q ss_pred cCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeE-EecC-HHHHHHHHHHc-CCcEEEE
Q 017030 108 QGTADAVRQFHWLFEDPRNKVIEDVLILSGDHL-YRMD-YMDFVQNHRQS-GADITIS 162 (378)
Q Consensus 108 ~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~-~~~d-~~~~l~~h~~~-~~~~ti~ 162 (378)
.|-+.++..+..... .+.++++.+|.. ...+ +..+++...+. +.++...
T Consensus 117 ~G~~~a~n~g~~~a~------gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g 168 (329)
T 3ckj_A 117 PGKGEALWRSLAASR------GDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKS 168 (329)
T ss_dssp CSHHHHHHHHHHHCC------CSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEE
T ss_pred CCHHHHHHHHHHhCC------CCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEE
Confidence 588888888877664 489999999998 7877 77777764443 4444333
No 181
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=31.83 E-value=32 Score=29.59 Aligned_cols=24 Identities=13% Similarity=0.169 Sum_probs=18.6
Q ss_pred CeeeeeeeehhhhhhcCCcEEEEEe
Q 017030 38 GAYRLIDVPMSNCINSGINKVYILT 62 (378)
Q Consensus 38 g~~pli~~~l~~l~~~gi~~I~iv~ 62 (378)
+. |-+.-.++.+.+.|+++|+|+-
T Consensus 63 ~~-P~i~~al~~l~~~G~~~ivV~P 86 (269)
T 2xvy_A 63 AA-PSPAEALAGMAEEGFTHVAVQS 86 (269)
T ss_dssp CC-CCHHHHHHHHHHTTCCEEEEEE
T ss_pred CC-CCHHHHHHHHHHCCCCEEEEEe
Confidence 45 7777788888888888887765
No 182
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=25.59 E-value=66 Score=26.22 Aligned_cols=60 Identities=10% Similarity=0.012 Sum_probs=32.6
Q ss_pred CCCcee--eCceeeeeEEecC----cEEc-ceEEeeceEcCCCEECCCCEEe----eeeeCCCCeEeeeeeee
Q 017030 309 LPPSKI--DDSKIVDSIISHG----SFIT-SSFIEHSVVGIRSRINANVHLK----VSPANPLCRRIWKCSSL 370 (378)
Q Consensus 309 ~~~~~i--~~~~i~~s~Ig~~----~~I~-~~~i~~SiI~~~~~Ig~~~~i~----~sIi~~~~~~~~~~~~~ 370 (378)
.+|+.+ ++++++|.+||++ ..-. .|.|+|.. |++| -++-+.++ -.|++.++.=.++=++|
T Consensus 40 q~~vF~le~GaTLkNvIIG~~~~dGIHC~G~CtleNVw-wedV-cEDA~T~k~~g~~~I~GGgA~~A~DKV~Q 110 (197)
T 1ee6_A 40 QKPIFRLEAGASLKNVVIGAPAADGVHCYGDCTITNVI-WEDV-GEDALTLKSSGTVNISGGAAYKAYDKVFQ 110 (197)
T ss_dssp CCCSEEECTTEEEEEEEECSSCTTCEEEESCEEEEEEE-ESSC-CSCSEEEEESEEEEEESCEEEEEEEEEEE
T ss_pred CCcEEEecCCCEEEEEEEcCCCcccEEEcCceeEEEEE-eeec-cccccEEcCCCeEEEECCCccCCCccEEE
Confidence 356666 5899999999853 2233 56666533 3332 12222222 25666666655555544
No 183
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=24.75 E-value=41 Score=26.29 Aligned_cols=12 Identities=25% Similarity=0.659 Sum_probs=8.4
Q ss_pred eEEEEcCCCCccc
Q 017030 10 AAVILGGGAGTRL 22 (378)
Q Consensus 10 ~avIla~G~g~rl 22 (378)
.+|||+| .|+|-
T Consensus 25 ~avlLv~-HGS~~ 36 (156)
T 1tjn_A 25 RGLVIVG-HGSQL 36 (156)
T ss_dssp EEEEEEE-CCTTS
T ss_pred cCEEEEE-CCCCC
Confidence 5777776 77774
No 184
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=23.50 E-value=1.9e+02 Score=28.57 Aligned_cols=49 Identities=14% Similarity=0.170 Sum_probs=33.3
Q ss_pred cCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEecC-HHHHHHHHHHcCCc
Q 017030 108 QGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGAD 158 (378)
Q Consensus 108 ~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~d-~~~~l~~h~~~~~~ 158 (378)
.|-+.+.-.++...... ...+.++++..|.+...+ +..+++.+......
T Consensus 250 ~G~a~a~N~Gl~~A~g~--~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~ 299 (657)
T 4fix_A 250 LGGSGGYSRVMYEALKN--TDCQQILFMDDDIRLEPDSILRVLAMHRFAKAP 299 (657)
T ss_dssp CHHHHHHHHHHHHHHHH--CCCSEEEEECSSEEECTHHHHHHHHHHHHBSSC
T ss_pred CCHHHHHHHHHHHHHhc--CCCCEEEEECCCCccChhHHHHHHHHHHhCCCc
Confidence 46777666665554210 014789999999999888 78888877665443
No 185
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=21.14 E-value=75 Score=29.04 Aligned_cols=51 Identities=16% Similarity=0.171 Sum_probs=37.4
Q ss_pred cCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeE-EecC-HHHHHHHHHHc-CCcEEEEEe
Q 017030 108 QGTADAVRQFHWLFEDPRNKVIEDVLILSGDHL-YRMD-YMDFVQNHRQS-GADITISCL 164 (378)
Q Consensus 108 ~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~-~~~d-~~~~l~~h~~~-~~~~ti~~~ 164 (378)
.|-+.++..+..... .+.++++.+|.. ...+ +..+++...+. +.++.....
T Consensus 165 ~G~g~A~n~G~~~A~------gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~ 218 (387)
T 3f1y_A 165 HGKGDAMWRALSVTR------GDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAY 218 (387)
T ss_dssp CSHHHHHHHHTTTCC------SSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEE
T ss_pred CCHHHHHHHHHHhcC------CCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEee
Confidence 588888888876653 488889999998 6766 77888776554 566666544
No 186
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=20.23 E-value=2.2e+02 Score=28.75 Aligned_cols=42 Identities=17% Similarity=0.115 Sum_probs=33.4
Q ss_pred cCcHHHHHHHHHHhcCCCCCCCCeEEEEcCCeEEecC-HHHHHHHHHHc
Q 017030 108 QGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQS 155 (378)
Q Consensus 108 ~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~~~~~d-~~~~l~~h~~~ 155 (378)
.|-++++..+.+..+ .+.++++.+|.....| +..+++.+.+.
T Consensus 224 ~GKa~alN~gl~~a~------gd~Il~lDaD~~~~pd~L~~lv~~~~~d 266 (802)
T 4hg6_A 224 HAKAGNMSAALERLK------GELVVVFDADHVPSRDFLARTVGYFVED 266 (802)
T ss_dssp SHHHHHHHHHHHHCC------CSEEEECCTTEEECTTHHHHHHHHHHHS
T ss_pred CcchHHHHHHHHhcC------CCEEEEECCCCCcChHHHHHHHHHHhcC
Confidence 367888888877765 4899999999999888 78888876543
Done!