Query 017032
Match_columns 378
No_of_seqs 155 out of 1156
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 07:49:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017032.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017032hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cnq_A Phosphoribosylaminoimid 100.0 1.4E-82 4.7E-87 619.3 20.1 255 110-378 8-291 (306)
2 3r9r_A Phosphoribosylaminoimid 100.0 2E-82 7E-87 616.7 18.1 256 110-378 9-280 (301)
3 3kre_A Phosphoribosylaminoimid 100.0 3.9E-75 1.3E-79 556.5 13.8 219 112-359 24-250 (263)
4 2z02_A Phosphoribosylaminoimid 100.0 1.1E-74 3.9E-79 548.1 14.9 215 111-354 9-227 (242)
5 2gqr_A Phosphoribosylaminoimid 100.0 2.4E-74 8.2E-79 544.5 16.5 212 113-354 4-220 (237)
6 1kut_A Phosphoribosylaminoimid 100.0 3.8E-74 1.3E-78 541.1 17.0 209 115-354 1-212 (230)
7 2ywv_A Phosphoribosylaminoimid 100.0 2E-74 6.9E-79 547.0 13.3 213 113-354 7-224 (244)
8 3nua_A Phosphoribosylaminoimid 100.0 8.6E-74 3E-78 541.0 14.5 217 113-359 8-229 (238)
9 3u55_A Phosphoribosylaminoimid 100.0 3.9E-73 1.3E-77 536.8 16.0 212 112-353 3-218 (238)
10 2h31_A Multifunctional protein 100.0 1.3E-69 4.3E-74 547.8 15.9 214 114-354 11-237 (425)
11 2eqj_A Metal-response element- 28.7 31 0.0011 26.5 2.3 26 114-139 27-52 (66)
12 2nn6_E Exosome complex exonucl 24.0 16 0.00053 34.7 -0.2 35 64-98 3-37 (305)
13 2a1j_B DNA excision repair pro 22.5 31 0.0011 26.7 1.4 29 67-96 5-33 (91)
No 1
>2cnq_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; ligase, phosphoribosylaminoimidazolesuccinocarboxamide (saicar) SYN ligase; HET: ADP AMZ AMP; 1.00A {Saccharomyces cerevisiae} SCOP: d.143.1.1 PDB: 1a48_A* 1obd_A* 2cnu_A* 2cnv_A* 1obg_A*
Probab=100.00 E-value=1.4e-82 Score=619.31 Aligned_cols=255 Identities=37% Similarity=0.644 Sum_probs=237.5
Q ss_pred CCC-CCcccccccceeeecC-CeEEEEEcCCccccccccC-CCCchhHHHHHHHHHHHHhccCCCCCccccC--------
Q 017032 110 VPG-LKSKTRGKVRDIYDGG-DYLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTRHITPNAVISS-------- 178 (378)
Q Consensus 110 ~p~-l~~lyeGKvKdVY~~~-d~ll~~fkDriSAfD~~~~-~IpgKG~vln~iS~~~Fe~L~~gIpTHfi~~-------- 178 (378)
+|+ |+++|+||||+||+++ +.+||+||||+||||++++ .|||||++||+||+|||++|++|||||||+.
T Consensus 8 ~~~~~~~ly~GKvkdvY~~~d~~ll~v~~DriSAfD~~~~~~IpgKG~vl~~iS~~~F~~L~~~iptH~i~~~~~~~~~~ 87 (306)
T 2cnq_A 8 LDGILPLVARGKVRDIYEVDAGTLLFVATDRISAYDVIMENSIPEKGILLTKLSEFWFKFLSNDVRNHLVDIAPGKTIFD 87 (306)
T ss_dssp CTTSSCEEEECSSEEEEEEETTEEEEEECSCCEETTEECSSCCTTHHHHHHHHHHHHHHHTTTTSEESBCCCCTTCCGGG
T ss_pred ccccccccccCCceEEEEcCCCEEEEEEeCCCCCcccccCCCCCcHhHHHHHHHHHHHHHHhccCCcceeeccccccccc
Confidence 477 9999999999999987 5899999999999999985 8999999999999999999999999999963
Q ss_pred --------------CCCceEEEeccceeeeEEEEeeeeecCCcchhhHhhhcCccccccccCCCCcccCCCCCCceEeec
Q 017032 179 --------------PDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPT 244 (378)
Q Consensus 179 --------------~~~~~~lvkk~~miPlEvVvRn~atGS~~krl~~rY~~G~~~~~g~~lp~Gl~eg~~L~~PivE~t 244 (378)
+++++|+||||+|||||||||||+|||+ |++|++ .+++||+.||+|+++|++||+|||||+
T Consensus 88 ~~P~~~~~y~y~~~l~~r~~lvkk~~~iPlE~VvR~y~tGS~----~k~y~~-~~~v~Gi~lp~Gl~eg~~Lp~Pi~tp~ 162 (306)
T 2cnq_A 88 YLPAKLSEPKYKTQLEDRSLLVHKHKLIPLEVIVRGYITGSA----WKEYVK-TGTVHGLKQPQGLKESQEFPEPIFTPS 162 (306)
T ss_dssp GSCGGGGSHHHHHHHTTSEEEEECCEECSSBEEEEEECCHHH----HHHHHH-HSEETTEECCTTCCTTCEEEEEEECCB
T ss_pred ccccccccccchhhcCCceEEEEecceeeEEEEEeeeeccch----HHHHhc-cCccccccCCCCCcccCCCCCCEEEee
Confidence 4677899999999999999999999996 999987 489999999999999999999999999
Q ss_pred cCCCC--CCCCCCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeeEeeecCC-CcEEEEeeccCCCC
Q 017032 245 TKAED--HDVPVTPDEIVKLGLMTEAEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSD-DSILLIDEVHTPDS 321 (378)
Q Consensus 245 tK~d~--~Dp~Is~e~i~~lglvt~ee~~~i~~~al~I~~iL~~~~~~~Gl~LVD~KlEFG~d~~-GeIvLaDEI~TPDS 321 (378)
||+|. |||+||++++++ +++++++++|+++|++||++++++|+++||+|||||||||++.+ |+|+|+|||+||||
T Consensus 163 tK~d~~~hD~~Is~~~~~~--~~~~e~~~~i~~~al~i~~~l~~~~~~~GiiLvD~K~EFG~d~~~G~ivL~DEI~TPDS 240 (306)
T 2cnq_A 163 TKAEQGEHDENISPAQAAE--LVGEDLSRRVAELAVKLYSKCKDYAKEKGIIIADTKFEFGIDEKTNEIILVDEVLTPDS 240 (306)
T ss_dssp CCCC---CCCBCCHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEEEETTTTEEEEESCCSCTTT
T ss_pred ecccccCCCCCCCHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEeEEeEEeCCCCcEEEEEeecCCCc
Confidence 99994 999999999999 79999999999999999999999999999999999999999977 99999999999999
Q ss_pred CcccccccchhhhhcCCCCCCCcHHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHhcC
Q 017032 322 SRYWIAHSYEERFQSGLEPENVDKEFLRLWFKDH-CNPYEDEVLPDAPEELICELAWR 378 (378)
Q Consensus 322 ~RlWd~~t~e~rfr~g~~~~~~DKq~~R~w~~~~-~~~~~~~~~P~lP~e~v~~~~~r 378 (378)
||||++++|+. |..+++||||+||+|+.++ |+ +.+ +|+||+++|+++++|
T Consensus 241 sR~W~~~~y~~----G~~~~s~DKq~~R~~l~~~g~~--~~~-~p~lp~~vv~~~~~~ 291 (306)
T 2cnq_A 241 SRFWNGASYKV----GESQDSYDKQFLRDWLTANKLN--GVN-GVKMPQDIVDRTRAK 291 (306)
T ss_dssp EEEEETTTCCT----TSCCCCSSTHHHHHHHHHTTCT--TCT-TCCCCHHHHHHHHHH
T ss_pred cceeccccccC----CCCCcccCHHHHHhHHhhcCCC--CCC-CCCCCHHHHHHHHHH
Confidence 99999999974 8889999999999999873 33 344 899999999998864
No 2
>3r9r_A Phosphoribosylaminoimidazole-succinocarboxamide S; ssgcid; 1.85A {Mycobacterium abscessus}
Probab=100.00 E-value=2e-82 Score=616.68 Aligned_cols=256 Identities=34% Similarity=0.622 Sum_probs=237.9
Q ss_pred CCCCCcccccccceeeecCC-eEEEEEcCCccccccccC-CCCchhHHHHHHHHHHHHhccCCCCCccccCC--------
Q 017032 110 VPGLKSKTRGKVRDIYDGGD-YLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTRHITPNAVISSP-------- 179 (378)
Q Consensus 110 ~p~l~~lyeGKvKdVY~~~d-~ll~~fkDriSAfD~~~~-~IpgKG~vln~iS~~~Fe~L~~gIpTHfi~~~-------- 179 (378)
+|+++++|+||||+||++++ .+||+||||+||||++++ .|||||++||+||+|||++|+ ||||||+.+
T Consensus 9 ~~~~~~ly~GKvk~vY~~~d~~ll~v~~DriSAfD~~~~~~IpgKG~vl~~iS~~~F~~L~--IptH~i~~~~~~~~p~~ 86 (301)
T 3r9r_A 9 LSDYQHVASGKVRELYRVDDEHLLFVATDRISAFDFVLDTPIPDKGRILTAMSVFFFGLLT--VPNHLAGPPDDPRIPEE 86 (301)
T ss_dssp GGGSEEEEECSSEEEEECSSSEEEEEECSCCEETTEECSSCCTTHHHHHHHHHHHHHHHSC--SCBCBCSCTTCTTSCGG
T ss_pred CCCCceeecccceEEEEcCCCcEEEEEeCCCcCccccCCCCCCcHHHHHHHHHHHHHHhhC--CCeeEeeccCccccccc
Confidence 58999999999999999986 799999999999999975 899999999999999999999 999999986
Q ss_pred -CCceEEEeccceeeeEEEEeeeeecCCcchhhHhhhcCccccccccCCCCcccCCCCCCceEeeccCCCC--CCCCCCH
Q 017032 180 -DKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAED--HDVPVTP 256 (378)
Q Consensus 180 -~~~~~lvkk~~miPlEvVvRn~atGS~~krl~~rY~~G~~~~~g~~lp~Gl~eg~~L~~PivE~ttK~d~--~Dp~Is~ 256 (378)
.+++|+||+|+|||||||||||+|||+ |++|+++ +++||+.||+|+++|++|++|||||+||+|. ||++||+
T Consensus 87 ~~~r~~lvkk~~~iPlEvVvR~y~tGS~----~kry~~~-g~vcGi~lp~Gl~eg~~L~~Pi~e~~tK~d~~~hD~~Is~ 161 (301)
T 3r9r_A 87 VLGRALLVRRLDMLPVECVARGYLTGSG----LLDYQRT-GAVCGHVLPQGLGEASRLDPPLFTPATKADIGEHDMNVDF 161 (301)
T ss_dssp GTTSEEEEECCEECSCBEEEEEEECHHH----HHHHHHH-SEETTEECCTTCCTTEEEEEEEECCEECCCSSSCCEECCH
T ss_pred ccCceEEEEEccccceEEEEEeeecchh----HHHhhcc-CccccccCCccccccccCCCCEEEeeeccccCCCCCCcCH
Confidence 458999999999999999999999996 9999885 8999999999999999999999999999995 9999999
Q ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeeEeeecCCCcEEEEeeccCCCCCcccccccchhhhhc
Q 017032 257 DEIVKLGLMTEAEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDSSRYWIAHSYEERFQS 336 (378)
Q Consensus 257 e~i~~lglvt~ee~~~i~~~al~I~~iL~~~~~~~Gl~LVD~KlEFG~d~~GeIvLaDEI~TPDS~RlWd~~t~e~rfr~ 336 (378)
+++++ +++.+++++|+++|++||++++++|+++||+|||||||||++.+|+|+|+|||+||||||||++++|+ .
T Consensus 162 ~~~~~--~~g~~~~~~i~~~al~i~~~l~~~~~~~GiiLvD~K~EFG~d~~G~ivL~DEI~TPDSsR~W~~~~y~----~ 235 (301)
T 3r9r_A 162 AAVVG--LVGAVRANQLRDETIKIYTRAAAHALHKGIILADTKFEFGVDIEGNLVLADEVFTPDSSRYWDAAHYQ----P 235 (301)
T ss_dssp HHHHH--HHCHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEECEEECTTSCEEECSCCSCTTTEEEEEGGGCC----T
T ss_pred HHHHH--HcCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEeeEcCCCcEEEEeecCCCcccccccccccc----C
Confidence 99986 48999999999999999999999999999999999999999999999999999999999999999997 4
Q ss_pred CCCCCCCcHHHHHHHHHh---cCCCCCCCCCCCCcHHHHHHHhcC
Q 017032 337 GLEPENVDKEFLRLWFKD---HCNPYEDEVLPDAPEELICELAWR 378 (378)
Q Consensus 337 g~~~~~~DKq~~R~w~~~---~~~~~~~~~~P~lP~e~v~~~~~r 378 (378)
|..++++|||+||+||.+ .|+...++++|+||+|+|++|++|
T Consensus 236 g~~~~s~DKq~~R~~l~~~~~~~~~~~~~~~p~lP~evv~~t~~~ 280 (301)
T 3r9r_A 236 GVVQDSFDKQFVRNWLTGPESGWDRASDTPPPPLPDEVAVATRER 280 (301)
T ss_dssp TSCCCCTTTHHHHHHHTSSSSCCCTTC--CCCCCCHHHHHHHHHH
T ss_pred CCCCcccchHHHHhhccccccCCcccccCCCCCCCHHHHHHHHHH
Confidence 888899999999999986 344333678999999999999875
No 3
>3kre_A Phosphoribosylaminoimidazole-succinocarboxamide S; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.80A {Ehrlichia chaffeensis str}
Probab=100.00 E-value=3.9e-75 Score=556.46 Aligned_cols=219 Identities=24% Similarity=0.349 Sum_probs=204.9
Q ss_pred CCCcccccccceeeecCC--eEEEEEcCCccccccccC-CCCchhHHHHHHHHHHHHhccC-CCCCccccCCCCceEEEe
Q 017032 112 GLKSKTRGKVRDIYDGGD--YLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTRH-ITPNAVISSPDKNVTIAK 187 (378)
Q Consensus 112 ~l~~lyeGKvKdVY~~~d--~ll~~fkDriSAfD~~~~-~IpgKG~vln~iS~~~Fe~L~~-gIpTHfi~~~~~~~~lvk 187 (378)
..++||+||||+||++++ .+|++||||+||||+++. .|||||++||+||+|||++|++ |||||||+.+++++|+||
T Consensus 24 ~~~~lyeGKvK~vY~~~d~~~ll~~~kDriSAfD~~~~~~IpgKG~~ln~iS~~~F~~L~~~GIptHfi~~~~~r~~lvk 103 (263)
T 3kre_A 24 NKEKIYEGKAKIIFATLNPLEVIQHFKDEITAFNNKKAAIIHEKGILNNYISSFLMKKLIDKGIKTHFISLLNQREQLVK 103 (263)
T ss_dssp --CEEEECSSEEEEECSSTTEEEEEECSEEEETTTTEEEECTTHHHHHHHHHHHHHHHHHHTTCCBSEEEECSSSEEEEE
T ss_pred cCcccccccceEEEECCCCCEEEEEEeCCCcCccccccCCcCcHhHHHHHHHHHHHHHHHhCCCCceeecccCCCeEEEE
Confidence 357899999999999975 799999999999999975 8999999999999999999984 899999999999999999
Q ss_pred ccceeeeEEEEeeeeecCCcchhhHhhhcCccccccccCCCCcccCCCCCCceEeeccCCCC-CCCCCCHHHHHHcCCCC
Q 017032 188 KCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAED-HDVPVTPDEIVKLGLMT 266 (378)
Q Consensus 188 k~~miPlEvVvRn~atGS~~krl~~rY~~G~~~~~g~~lp~Gl~eg~~L~~PivE~ttK~d~-~Dp~Is~e~i~~lglvt 266 (378)
+|+|||||||||||+|||+ |+|| |+++|++||+|||||+||+|+ |||+||+++++++|+++
T Consensus 104 k~~~iPlEvVvR~~aaGS~----~kr~--------------Gl~eg~~L~~Pive~~~K~d~~hDp~Is~~~~~~lg~~~ 165 (263)
T 3kre_A 104 KITIIPIEVVIRNLAAGNF----SKRF--------------QIADGTPFKSPIIEFYYKNDELSDPMVSEGHILSFQWLT 165 (263)
T ss_dssp CEEECSEEEEEEEECCHHH----HHHH--------------TCCTTCEEEEEEEEEEECCTTTTCCEECHHHHHHTTSSC
T ss_pred EcccccEEEEEeeeecchh----hhhc--------------CCcccccCCCCeEEEEecCcccCCCCCCHHHHHHhCCCC
Confidence 9999999999999999997 7777 478899999999999999997 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeeEeeecCCC---cEEEEeeccCCCCCcccccccchhhhhcCCCCCCC
Q 017032 267 EAEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDD---SILLIDEVHTPDSSRYWIAHSYEERFQSGLEPENV 343 (378)
Q Consensus 267 ~ee~~~i~~~al~I~~iL~~~~~~~Gl~LVD~KlEFG~d~~G---eIvLaDEI~TPDS~RlWd~~t~e~rfr~g~~~~~~ 343 (378)
++++++|+++|++||++++++|+++||+|||||||||++.+| +|+|+||| |||||||||++++ +++
T Consensus 166 ~ee~~~i~~~al~i~~~l~~~~~~~GiiLvD~K~EFG~d~~G~~~~ivL~DEI-tPDs~R~Wd~~~~----------~~l 234 (263)
T 3kre_A 166 NQELEKIKILSLKINNILSELFFNVGIKLVDFKLEFGKLHNDEQSDLFLADEI-SPDTCRLWDISTN----------KRL 234 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEECEEEETTCTTCCCEECSCC-STTTEEEEETTTC----------CBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEeeEeCCCCcceEEEEEee-CCCcccceECCCC----------Ccc
Confidence 999999999999999999999999999999999999999889 99999999 9999999999987 489
Q ss_pred cHHHHHHHHHhcCCCC
Q 017032 344 DKEFLRLWFKDHCNPY 359 (378)
Q Consensus 344 DKq~~R~w~~~~~~~~ 359 (378)
|||+||+|+.+....|
T Consensus 235 DKd~fR~~lg~v~~~Y 250 (263)
T 3kre_A 235 DKDRYRLNLGNVIEGY 250 (263)
T ss_dssp STHHHHTTCSCHHHHH
T ss_pred CHHHHHhcchhHHHHH
Confidence 9999999987654444
No 4
>2z02_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; 2-layer sandwich, ligase, purine biosynthesis, structural genomics; HET: ATP CIT; 2.03A {Methanocaldococcus jannaschii} PDB: 2yzl_A*
Probab=100.00 E-value=1.1e-74 Score=548.15 Aligned_cols=215 Identities=28% Similarity=0.382 Sum_probs=204.4
Q ss_pred CCCCcccccccceeeecCC-eEEEEEcCCccccccccC-CCCchhHHHHHHHHHHHHhcc-CCCCCccccCCCCceEEEe
Q 017032 111 PGLKSKTRGKVRDIYDGGD-YLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTR-HITPNAVISSPDKNVTIAK 187 (378)
Q Consensus 111 p~l~~lyeGKvKdVY~~~d-~ll~~fkDriSAfD~~~~-~IpgKG~vln~iS~~~Fe~L~-~gIpTHfi~~~~~~~~lvk 187 (378)
..++++|+||||+||+++| .+|++||||+||||++++ .|||||++||+||++||++|+ +||||||++.+++++|+||
T Consensus 9 ~~~~~lyeGK~K~vY~~~d~~ll~~~kDrisAfd~~~~~~I~gKG~~~n~iS~~~F~~L~~~giptH~i~~~~~~~~lvk 88 (242)
T 2z02_A 9 LKKQPLYSGKAKSIYEIDDDKVLIEFRDDITAGNGAKHDVKQGKGYLNALISSKLFEALEENGVKTHYIKYIEPRYMIAK 88 (242)
T ss_dssp TTSCCSEECSSEEEEECSSSEEEEEECSEEEETTTTEEEECTTHHHHHHHHHHHHHHHHHHTTCCBSEEEEETTTEEEEE
T ss_pred hccCeeecccCeEEEEcCCCEEEEEEeCCCcccccccCCCCCchHHHHHHHHHHHHHHHHhCCCCceEEeEeCCCEEEEE
Confidence 4578999999999999985 899999999999999974 899999999999999999998 7999999999999999999
Q ss_pred ccceeeeEEEEeeeeecCCcchhhHhhhcCccccccccCCCCcccCCCCCCceEeeccCCCC-CCCCCCHHHHHHcCCCC
Q 017032 188 KCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAED-HDVPVTPDEIVKLGLMT 266 (378)
Q Consensus 188 k~~miPlEvVvRn~atGS~~krl~~rY~~G~~~~~g~~lp~Gl~eg~~L~~PivE~ttK~d~-~Dp~Is~e~i~~lglvt 266 (378)
+|+|||||||||||||||+ |++| |+++|++||+|||||+||+|+ |||+||+++++++|+++
T Consensus 89 k~~~iPlEvVvR~~aaGS~----~kry--------------Gl~eg~~L~~Pi~e~~~K~d~~~Dp~Is~~~~~~~~~~~ 150 (242)
T 2z02_A 89 KVEIIPIEVIVRNIAAGSL----CRRY--------------PFEEGKELPFPIVQFDYKNDEYGDPMLNEDIAVALGLAT 150 (242)
T ss_dssp CEEECSEEEEEEEECCTHH----HHHS--------------SCCTTCEEEEEEEEEEECCGGGTCCBCCHHHHHHTTSSC
T ss_pred ECccceEEEEEeeeecccc----HHhc--------------CCccCcCCCCCEEEEEecCCcCCCCccCHHHHHHhccCC
Confidence 9999999999999999997 7777 467889999999999999997 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeeEeeecCCCcEEEEeeccCCCCCcccccccchhhhhcCCCCCCCcHH
Q 017032 267 EAEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDSSRYWIAHSYEERFQSGLEPENVDKE 346 (378)
Q Consensus 267 ~ee~~~i~~~al~I~~iL~~~~~~~Gl~LVD~KlEFG~d~~GeIvLaDEI~TPDS~RlWd~~t~e~rfr~g~~~~~~DKq 346 (378)
++++++|+++|++||++++++|+++||+|||||||||++.+|+|+|+||| ||||||||+++++ +++|||
T Consensus 151 ~ee~~~i~~~al~i~~~l~~~~~~~Gi~LvD~K~EFG~~~~G~ivL~DEI-tPDs~R~W~~~~~----------~~~DK~ 219 (242)
T 2z02_A 151 REELNKIKEIALKVNEVLKKLFDEKGIILVDFKIEIGKDREGNLLVADEI-SPDTMRLWDKETR----------DVLDKD 219 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEECEEEETTCCEEECSCC-STTTEEEEETTTC----------CBCSTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEcCCCCEEEEEee-cCCccccccCCCC----------CccCHH
Confidence 99999999999999999999999999999999999999999999999999 9999999998873 689999
Q ss_pred HHHHHHHh
Q 017032 347 FLRLWFKD 354 (378)
Q Consensus 347 ~~R~w~~~ 354 (378)
+||+|+.+
T Consensus 220 ~~R~~lg~ 227 (242)
T 2z02_A 220 VFRKDLGD 227 (242)
T ss_dssp HHHTTCSC
T ss_pred HHHhhchh
Confidence 99999864
No 5
>2gqr_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; PURC, ADE2, ADE1, nucleotide complex, octahedral magnesium coordination; HET: ADP; 2.00A {Escherichia coli} PDB: 2gqs_A*
Probab=100.00 E-value=2.4e-74 Score=544.52 Aligned_cols=212 Identities=25% Similarity=0.345 Sum_probs=201.8
Q ss_pred CCcccccccceeeecCC--eEEEEEcCCccccccccC-CCCchhHHHHHHHHHHHHhcc-CCCCCccccCCCCceEEEec
Q 017032 113 LKSKTRGKVRDIYDGGD--YLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTR-HITPNAVISSPDKNVTIAKK 188 (378)
Q Consensus 113 l~~lyeGKvKdVY~~~d--~ll~~fkDriSAfD~~~~-~IpgKG~vln~iS~~~Fe~L~-~gIpTHfi~~~~~~~~lvkk 188 (378)
.+++|+||||+||++++ .+||+||||+||||++++ .|||||++||+||+|||++|+ +|||||||+.+++++|+|++
T Consensus 4 ~~~lyeGK~K~vY~~~d~~~ll~~~kDr~sAfd~~~~~~I~gKG~~~~~iS~~~F~~L~~~giptH~i~~~~~~~~lvkk 83 (237)
T 2gqr_A 4 QAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNYFIMSKLAEAGIPTQMERLLSDTECLVKK 83 (237)
T ss_dssp CEEEEECSSEEEEECSSTTEEEEEECSEECCTTTTCCEECTTHHHHHHHHHHHHHHHHHHTTCCBCEEEECSSSEEEEEC
T ss_pred CCccccCCCeEEEECCCCCEEEEEEeCCCcccccccCCCCCChHHHHHHHHHHHHHHHHhcCCCceEEeeeCCCEEEEEE
Confidence 46899999999999874 799999999999999985 899999999999999999998 79999999999999999999
Q ss_pred cceeeeEEEEeeeeecCCcchhhHhhhcCccccccccCCCCcccCCCCCCceEeeccCCCC-CCCCCCHHHHHHcCCCCH
Q 017032 189 CSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAED-HDVPVTPDEIVKLGLMTE 267 (378)
Q Consensus 189 ~~miPlEvVvRn~atGS~~krl~~rY~~G~~~~~g~~lp~Gl~eg~~L~~PivE~ttK~d~-~Dp~Is~e~i~~lglvt~ 267 (378)
|+|||||||||||||||+ |++| |+++|++||+|||||+||+|+ |||+||+++++++|++|+
T Consensus 84 ~~~iPlEvVvR~~a~GS~----~kry--------------Gl~eg~~L~~Pi~e~~~K~d~~~Dp~I~~~~~~~~~~~~~ 145 (237)
T 2gqr_A 84 LDMVPVECVVRNRAAGSL----VKRL--------------GIEEGIELNPPLFDLFLKNDAMHDPMVNESYCETFGWVSK 145 (237)
T ss_dssp CEECSEEEEEEEECCHHH----HHHH--------------CCCTTCEEEEEEEEEEECCGGGTCCEECHHHHHHTTSSCH
T ss_pred cceeeEEEEEEeeeccch----HHhc--------------CCccccCCCCCEEEeeecCCcCCCCCCCHHHHHHhccCCH
Confidence 999999999999999997 7887 478899999999999999997 999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeeEeeecCCCcEEEEeeccCCCCCcccccccchhhhhcCCCCCCCcHHH
Q 017032 268 AEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDSSRYWIAHSYEERFQSGLEPENVDKEF 347 (378)
Q Consensus 268 ee~~~i~~~al~I~~iL~~~~~~~Gl~LVD~KlEFG~d~~GeIvLaDEI~TPDS~RlWd~~t~e~rfr~g~~~~~~DKq~ 347 (378)
+++++|+++|++||++++++|+++||+|||||||||++ +|+|+|+||| ||||||||+++++ +++|||+
T Consensus 146 ee~~~i~~~al~i~~~l~~~~~~~Gi~LvD~K~EFG~~-~G~ivL~DEI-tPDs~R~W~~~~~----------~~~DK~~ 213 (237)
T 2gqr_A 146 ENLARMKELTYKANDVLKKLFDDAGLILVDFKLEFGLY-KGEVVLGDEF-SPDGSRLWDKETL----------EKMDKDR 213 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEEE-TTEEEEESCC-STTSEEEEETTTC----------CBCSTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEeE-CCEEEEEEEe-cCCccccccCCCC----------cccCHHH
Confidence 99999999999999999999999999999999999998 9999999999 9999999999886 5899999
Q ss_pred HHHHHHh
Q 017032 348 LRLWFKD 354 (378)
Q Consensus 348 ~R~w~~~ 354 (378)
||+|+.+
T Consensus 214 ~R~~l~~ 220 (237)
T 2gqr_A 214 FRQSLGG 220 (237)
T ss_dssp HHTTCCC
T ss_pred HHHhHHH
Confidence 9999754
No 6
>1kut_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; structural genomics, saicar synthetase, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: d.143.1.1
Probab=100.00 E-value=3.8e-74 Score=541.10 Aligned_cols=209 Identities=25% Similarity=0.296 Sum_probs=185.5
Q ss_pred cccccccceeeecCCeEEEEEcCCccccccccC-CCCchhHHHHHHHHHHHHhcc-CCCCCccccCCCCceEEEecccee
Q 017032 115 SKTRGKVRDIYDGGDYLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTR-HITPNAVISSPDKNVTIAKKCSVI 192 (378)
Q Consensus 115 ~lyeGKvKdVY~~~d~ll~~fkDriSAfD~~~~-~IpgKG~vln~iS~~~Fe~L~-~gIpTHfi~~~~~~~~lvkk~~mi 192 (378)
++|+||||+||+++|.+||+||||+||||++++ .|||||++||+||++||++|+ +|||||||+.+++++|+||+|+||
T Consensus 1 ~ly~GK~k~vY~~~d~ll~~~~Dr~sAfd~~~~~~I~gKG~~~~~iS~~~F~~L~~~giptH~i~~~~~~~~lvkk~~~i 80 (230)
T 1kut_A 1 MNYEGKTKIVKVTGDYALLEFKDDITAGDGLKHDVLTGKGSICAETTAILMKYLSEKGIKTHLVEYIPPRTLKVIPLKMF 80 (230)
T ss_dssp ------CEEEEEETTEEEEEECCC-----------CCSHHHHHHHHHHHHHHHHHHTTCCBSEEEEETTTEEEECCCEEC
T ss_pred CCccccceEEEEcCCEEEEEEeCCCcccccccCCCCCccCHHHHHHHHHHHHHHHhCCCCceEEeecCCCEEEEEEceee
Confidence 489999999999988999999999999999975 899999999999999999998 799999999999999999999999
Q ss_pred eeEEEEeeeeecCCcchhhHhhhcCccccccccCCCCcccCCCCCCceEeeccCCCC-CCCCCCHHHHHHcCCCCHHHHH
Q 017032 193 PVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAED-HDVPVTPDEIVKLGLMTEAEFD 271 (378)
Q Consensus 193 PlEvVvRn~atGS~~krl~~rY~~G~~~~~g~~lp~Gl~eg~~L~~PivE~ttK~d~-~Dp~Is~e~i~~lglvt~ee~~ 271 (378)
|||||||||+|||+ |++| |+++|++||+|||||+||+|+ |||+||+++++++|++|+++++
T Consensus 81 PlEvVvR~~a~GS~----~kry--------------Gl~eg~~L~~Pi~e~~~K~d~~~Dp~Is~~~~~~~~~~~~ee~~ 142 (230)
T 1kut_A 81 PLEVVVRLKKAGSF----VRRY--------------GGAEGEDLPVPLVEFFIKDDERHDPMVCVDHLEILGIATKKQAE 142 (230)
T ss_dssp SEEEEEEEECCHHH----HHHH--------------CCCTTCEEEEEEEEEEECCGGGTCCBCCHHHHHHTTSCCHHHHH
T ss_pred eEEEEEEeeeccch----HHhc--------------CCccCcCCCCCEEEEEecCccCCCCCCCHHHHHHhccCCHHHHH
Confidence 99999999999997 7887 468899999999999999997 9999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCeEEeeeeEeeecCCCcEEEEeeccCCCCCcccccccchhhhhcCCCCCCCcHHHHHHH
Q 017032 272 EASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDSSRYWIAHSYEERFQSGLEPENVDKEFLRLW 351 (378)
Q Consensus 272 ~i~~~al~I~~iL~~~~~~~Gl~LVD~KlEFG~d~~GeIvLaDEI~TPDS~RlWd~~t~e~rfr~g~~~~~~DKq~~R~w 351 (378)
+|+++|++||++++++|+++||+|||||||||++.+|+|+|+||| ||||||||+ + ++++|||+||+|
T Consensus 143 ~i~~~al~i~~~l~~~~~~~Gi~LvD~K~EFG~~~~G~ivL~DEI-tPDs~R~W~--~----------~~~~DK~~~R~~ 209 (230)
T 1kut_A 143 KMKEAAVKITLALKEFFERANFELWDIKYEFGLDKDGNVVLGDEI-SPDTFRLRK--K----------GEIFDKDVYRRD 209 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEECEEECTTCCEEECSCC-STTTEEEEE--T----------TCCCCHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEcCCCCEEEEEee-cCCcccccC--C----------CcccCHHHHHHh
Confidence 999999999999999999999999999999999989999999999 999999998 2 268999999999
Q ss_pred HHh
Q 017032 352 FKD 354 (378)
Q Consensus 352 ~~~ 354 (378)
+.+
T Consensus 210 l~~ 212 (230)
T 1kut_A 210 LGD 212 (230)
T ss_dssp GGC
T ss_pred HHH
Confidence 875
No 7
>2ywv_A Phosphoribosylaminoimidazole succinocarboxamide S; ADP complex, structural genomics, NPPSFA; HET: ADP; 1.75A {Geobacillus kaustophilus}
Probab=100.00 E-value=2e-74 Score=547.00 Aligned_cols=213 Identities=30% Similarity=0.402 Sum_probs=202.4
Q ss_pred CCcccccccceeeecCC--eEEEEEcCCccccccccC-CCCchhHHHHHHHHHHHHhcc-CCCCCccccCCCCceEEEec
Q 017032 113 LKSKTRGKVRDIYDGGD--YLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTR-HITPNAVISSPDKNVTIAKK 188 (378)
Q Consensus 113 l~~lyeGKvKdVY~~~d--~ll~~fkDriSAfD~~~~-~IpgKG~vln~iS~~~Fe~L~-~gIpTHfi~~~~~~~~lvkk 188 (378)
++++|+||||+||++++ .+|++||||+||||++++ .|||||++||+||+|||++|+ +|||||||+.+++++|+||+
T Consensus 7 ~~~lyeGK~K~vY~~~d~~~ll~~~kDrisAfd~~~~~~I~gKG~~~n~iS~~~F~~L~~~giptH~i~~~~~~~~lvkk 86 (244)
T 2ywv_A 7 QQLLYEGKAKKIYATDEPDVLWVEYKDSATAFNGEKKATIAGKGRLNNEISSLLFLKLREAGIANHFIEKLSPTEQLVRR 86 (244)
T ss_dssp EEEEEECSSEEEEEESSTTEEEEEECSEEEETTTTEEEECTTHHHHHHHHHHHHHHHHHHTTCCBSEEEECSSSEEEEEC
T ss_pred ccccccccCeEEEECCCCCEEEEEEcCCccccccccCCCCCChhHHHHHHHHHHHHHHHhCCCCceEecccCCCEEEEEE
Confidence 46899999999999874 799999999999999974 899999999999999999998 79999999999999999999
Q ss_pred cceeeeEEEEeeeeecCCcchhhHhhhcCccccccccCCCCcccCCCCCCceEeeccCCCC-CCCCCCHHHHHHcCCCCH
Q 017032 189 CSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAED-HDVPVTPDEIVKLGLMTE 267 (378)
Q Consensus 189 ~~miPlEvVvRn~atGS~~krl~~rY~~G~~~~~g~~lp~Gl~eg~~L~~PivE~ttK~d~-~Dp~Is~e~i~~lglvt~ 267 (378)
|+|||||||||||||||+ |++| |+++|++||+|||||+||+|+ |||+||+++++++|++++
T Consensus 87 ~~~iPlEvVvR~~aaGS~----~kry--------------Gl~eg~~L~~Pi~e~~~K~d~~~Dp~I~~~~~~~~~~~~~ 148 (244)
T 2ywv_A 87 VTIIPLEVVVRNVVAGSL----AKRI--------------GLEEGTPLEAPLVEFYYKNDDLGDPLLLEDHIFILKLASR 148 (244)
T ss_dssp CEECSEEEEEEEEECHHH----HHHH--------------TCCTTEEEEEEEEEEEECCGGGTCCEECHHHHHHHTSSCH
T ss_pred cccccEEEEEEeeecccc----HHhc--------------CCccCcCCCCCEEEEEecCCcCCCCCCCHHHHHHhccCCH
Confidence 999999999999999997 7887 467889999999999999997 999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeeEeeecCCCcEEEEeeccCCCCCcccccccchhhhhcCCCCCCCcHHH
Q 017032 268 AEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDSSRYWIAHSYEERFQSGLEPENVDKEF 347 (378)
Q Consensus 268 ee~~~i~~~al~I~~iL~~~~~~~Gl~LVD~KlEFG~d~~GeIvLaDEI~TPDS~RlWd~~t~e~rfr~g~~~~~~DKq~ 347 (378)
++++.|+++|++||++++++|+++||+|||||||||++.+|+|+|+||| ||||||||+++++ +++|||+
T Consensus 149 ee~~~i~~~al~i~~~l~~~~~~~Gi~LvD~K~EFG~~~~G~ivL~DEI-tPDs~R~W~~~~~----------~~~DK~~ 217 (244)
T 2ywv_A 149 EEVAALKQAALAVNDVLRLHFAERNVRLIDFKLEFGRTADGAILLADEI-SPDTCRLWDAKTN----------EKLDKDV 217 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEECEEECTTSCEEECSCC-STTTEEEEETTTC----------CBCSTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEcCCCCEEEEeee-cCCcceeeeCCCC----------cccCHHH
Confidence 9999999999999999999999999999999999999989999999999 9999999998874 5899999
Q ss_pred HHHHHHh
Q 017032 348 LRLWFKD 354 (378)
Q Consensus 348 ~R~w~~~ 354 (378)
||+|+.+
T Consensus 218 ~R~~l~~ 224 (244)
T 2ywv_A 218 FRRDLGS 224 (244)
T ss_dssp HHTTCSC
T ss_pred HHhhHHH
Confidence 9999753
No 8
>3nua_A Phosphoribosylaminoimidazole-succinocarboxamide S; alpha-beta structure, csgid, ligase, center for structural G of infectious diseases; HET: ADP AMP CIT; 1.40A {Clostridium perfringens} SCOP: d.143.1.0
Probab=100.00 E-value=8.6e-74 Score=541.01 Aligned_cols=217 Identities=25% Similarity=0.381 Sum_probs=202.9
Q ss_pred CCcccccccceeeecCC--eEEEEEcCCccccccccC-CCCchhHHHHHHHHHHHHhcc-CCCCCccccCCCCceEEEec
Q 017032 113 LKSKTRGKVRDIYDGGD--YLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTR-HITPNAVISSPDKNVTIAKK 188 (378)
Q Consensus 113 l~~lyeGKvKdVY~~~d--~ll~~fkDriSAfD~~~~-~IpgKG~vln~iS~~~Fe~L~-~gIpTHfi~~~~~~~~lvkk 188 (378)
.+++|+||||+||++++ .++++||||+||||++++ .|||||+++|+||+|||++|+ +||||||++.+++++|+||+
T Consensus 8 ~~~lyeGK~K~vY~~~d~~~ll~~~kDriSAfD~~~~~~I~gKG~v~~~iS~~~F~~L~~~gIptH~i~~~~~~~~lvkk 87 (238)
T 3nua_A 8 LEMLYEGKAKKIYATDKEDMVIVHYKDDATAFNGEKKAQIESKGVLNNEITSLIFEMLNKEGIKTHFVEKLNDRDQLCKK 87 (238)
T ss_dssp EEEEEECSSEEEEEESSTTEEEEEECSEEEETTTTEEEECTTHHHHHHHHHHHHHHHHHHTTCCBSEEEECSSSEEEEEC
T ss_pred cCccccccceEEEEcCCCCEEEEEEeCCCcCcccccCCCcCcHhHHHHHHHHHHHHHHHHCCCCCceecccCCCeEEEEE
Confidence 46799999999999874 688999999999999975 899999999999999999995 79999999999999999999
Q ss_pred cceeeeEEEEeeeeecCCcchhhHhhhcCccccccccCCCCcccCCCCCCceEeeccCCCC-CCCCCCHHHHHHcCCCCH
Q 017032 189 CSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAED-HDVPVTPDEIVKLGLMTE 267 (378)
Q Consensus 189 ~~miPlEvVvRn~atGS~~krl~~rY~~G~~~~~g~~lp~Gl~eg~~L~~PivE~ttK~d~-~Dp~Is~e~i~~lglvt~ 267 (378)
|+|||||||||||+|||+ |+|| |+++|++||+|||||+||+|+ |||+||++++.++|++|+
T Consensus 88 ~~~iPlEvVvR~~a~GS~----~kry--------------Gl~eg~~L~~Pi~e~~~K~d~~~Dp~i~~~~~~~~g~~~~ 149 (238)
T 3nua_A 88 VEIVPLEVIVRNVAAGSM----AKRL--------------GLEEGYELKTTVFELSYKDDSLGDPLINDYHAVGIGATTF 149 (238)
T ss_dssp CEECSEEEEEEEEECHHH----HHHH--------------TCCTTEEEEEEEEEEEECCGGGTCCEECHHHHHHTTSCCH
T ss_pred eeeeeEEEEEeeeecccc----hhhc--------------CCcccccCCCCeEEEeecCCCCCCCCCCHHHHHHcCCCCH
Confidence 999999999999999996 7887 467889999999999999996 999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeeEeeecCCCcEEEEeeccCCCCCcccccccchhhhhcCCCCCCCcHHH
Q 017032 268 AEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDSSRYWIAHSYEERFQSGLEPENVDKEF 347 (378)
Q Consensus 268 ee~~~i~~~al~I~~iL~~~~~~~Gl~LVD~KlEFG~d~~GeIvLaDEI~TPDS~RlWd~~t~e~rfr~g~~~~~~DKq~ 347 (378)
+++++|+++|++||++++++|+++||+|||||||||++ +|+|+|+||| |||||||||+++. +++|||+
T Consensus 150 ee~~~i~~~al~i~~~l~~~~~~~GiiLvD~K~EFG~~-~g~ivL~DEi-tPDs~R~W~~~~~----------~~~DKd~ 217 (238)
T 3nua_A 150 EELNKIYEITAKVNEILKEAFKKQNINLIDFKLEFGRY-NGEILLADEI-SPDTCRFWDATTG----------EKMDKDR 217 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEEE-TTEEEEESCC-STTTEEEEETTTC----------CBCSTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEeEEE-CCEEEEEEee-CCCcccccCCCCC----------cccChHH
Confidence 99999999999999999999999999999999999999 9999999999 9999999998754 6999999
Q ss_pred HHHHHHhcCCCC
Q 017032 348 LRLWFKDHCNPY 359 (378)
Q Consensus 348 ~R~w~~~~~~~~ 359 (378)
||+|+.+....|
T Consensus 218 ~R~~lg~v~~~Y 229 (238)
T 3nua_A 218 FRRDMGNVINGY 229 (238)
T ss_dssp HHTTCSCHHHHH
T ss_pred HhhccchHHHHH
Confidence 999986643333
No 9
>3u55_A Phosphoribosylaminoimidazole-succinocarboxamide S; saicar synthetase-like fold, ligase, ATP-binding, NOVO purine biosynthesis; 1.90A {Pyrococcus horikoshii} PDB: 3u54_A
Probab=100.00 E-value=3.9e-73 Score=536.81 Aligned_cols=212 Identities=29% Similarity=0.400 Sum_probs=190.4
Q ss_pred CCCcccccccceeeecCC-eEEEEEcCCccccccccC-CCCchhHHHHHHHHHHHHhcc-CCCCCccccCCCCceEEEec
Q 017032 112 GLKSKTRGKVRDIYDGGD-YLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTR-HITPNAVISSPDKNVTIAKK 188 (378)
Q Consensus 112 ~l~~lyeGKvKdVY~~~d-~ll~~fkDriSAfD~~~~-~IpgKG~vln~iS~~~Fe~L~-~gIpTHfi~~~~~~~~lvkk 188 (378)
.+++||+||||+||++++ .+||+||||+||||++++ .|||||++||+||+|||++|+ +||||||++.+++++|+||+
T Consensus 3 k~~~iy~GKvk~vy~~~~~~ll~~~~DriSAfD~~~~~~IpgKG~~l~~iS~~~F~~L~~~gi~th~i~~~~~r~~lvkk 82 (238)
T 3u55_A 3 KLMEVYEGKAKKMIPIDDDKLIMEFKDDATAFDGTKKARFKGKGWLNAQLSVIFFKLLEEHGIKTHFIGVAGGNRLIVEK 82 (238)
T ss_dssp ---------CEEEEECSSSEEEEEECSEEEETTTTEEEECTTHHHHHHHHHHHHHHHHHHTTCCBSEEEECSTTEEEEEC
T ss_pred ccccceeccceeEEEcCCCEEEEEEeCCccccCcccCCCCCChHHHHHHHHHHHHHHHHhcCCCCccccccccceeeeee
Confidence 467899999999999875 899999999999999975 799999999999999999997 69999999999999999999
Q ss_pred cceeeeEEEEeeeeecCCcchhhHhhhcCccccccccCCCCcccCCCCCCceEeeccCCCC-CCCCCCHHHHHHcCCCCH
Q 017032 189 CSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAED-HDVPVTPDEIVKLGLMTE 267 (378)
Q Consensus 189 ~~miPlEvVvRn~atGS~~krl~~rY~~G~~~~~g~~lp~Gl~eg~~L~~PivE~ttK~d~-~Dp~Is~e~i~~lglvt~ 267 (378)
|+|||||||||||+|||+ |++| |+++|++||+|+|||+||+|+ |||+||++++.++|+ +.
T Consensus 83 ~~~iPiE~VvR~y~tGS~----~k~~--------------gl~eg~~l~~Pi~e~~~K~d~~~Dp~I~~~~~~~~gi-~~ 143 (238)
T 3u55_A 83 LDMYPLEVVVRNVVAGSL----KKRL--------------PLPEGYELPEPIVELYYKNDELHDPMINYYHAKVLGI-SL 143 (238)
T ss_dssp CEECSEEEEEEEECCGGG----GGTS--------------SCCTTCEEEEEEEEEEECCTTTTSCEECHHHHHHTTC-CH
T ss_pred ecCCceEEEEecccccch----hccc--------------CCCCCccCCCCccccccccccCCCCCCCHHHHHHHhc-cc
Confidence 999999999999999997 6665 356778899999999999987 999999999999997 67
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeeEeeecCCCcEEEEeeccCCCCCcccccccchhhhhcCCCCCCCcHHH
Q 017032 268 AEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDSSRYWIAHSYEERFQSGLEPENVDKEF 347 (378)
Q Consensus 268 ee~~~i~~~al~I~~iL~~~~~~~Gl~LVD~KlEFG~d~~GeIvLaDEI~TPDS~RlWd~~t~e~rfr~g~~~~~~DKq~ 347 (378)
+|++.|+++|++||++++++|+++||+|||||||||++.+|+|+|+||| ||||||||+++++ ++||||+
T Consensus 144 ee~~~i~~~al~i~~~~~~~~~~~GiiLvDtK~EFG~d~~g~ivL~DEi-TPDssR~W~~~~~----------~~lDKq~ 212 (238)
T 3u55_A 144 DEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLADEI-SPDTCRFWDAKTK----------RSLDKDV 212 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECEEECTTSCEEECSCC-STTTEEEEETTTC----------CBCSTHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHCCCEEEeeEEEEEEcCCCCEEEEEec-CCCccccccCCCc----------cccChHH
Confidence 8999999999999999999999999999999999999999999999999 9999999998776 5899999
Q ss_pred HHHHHH
Q 017032 348 LRLWFK 353 (378)
Q Consensus 348 ~R~w~~ 353 (378)
||+|+.
T Consensus 213 ~R~~~~ 218 (238)
T 3u55_A 213 FRFDKG 218 (238)
T ss_dssp HHTTCS
T ss_pred hhcccc
Confidence 997753
No 10
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-69 Score=547.78 Aligned_cols=214 Identities=22% Similarity=0.283 Sum_probs=174.8
Q ss_pred CcccccccceeeecC---CeEEEEEcCCccccccccC-CCCchhHHHHHHHHHHHHhccC-CCCCccccCCCCceEEEec
Q 017032 114 KSKTRGKVRDIYDGG---DYLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTRH-ITPNAVISSPDKNVTIAKK 188 (378)
Q Consensus 114 ~~lyeGKvKdVY~~~---d~ll~~fkDriSAfD~~~~-~IpgKG~vln~iS~~~Fe~L~~-gIpTHfi~~~~~~~~lvkk 188 (378)
+++|+||||+||+.+ +.+|++||||+||||++++ .|||||++||+||+|||++|++ |||||||+.+++++|+|||
T Consensus 11 ~~lyeGKvK~vY~~~d~~~~ll~~~kDriSAfD~~~~~~IpgKG~vln~iS~~~F~~L~~~giptH~i~~~~~r~~lvkk 90 (425)
T 2h31_A 11 KKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQEAGIKTAFTRKCGETAFIAPQ 90 (425)
T ss_dssp CCCCBCSSCEEECCTTSCSSCEEEEC---------------CCHHHHHHHHHHHHHHHHHHTCCBSCCEECSSSEEEECC
T ss_pred CccccCCCeEEeccCCCCCEEEEEEeCCCCCCCcccCCCcCcccHHHHHHHHHHHHHHHhCCCCceEeeccCCCeEEEEE
Confidence 589999999999953 3799999999999999975 8999999999999999999987 9999999999999999999
Q ss_pred cceeeeEEEEeeeeecCCcchhhHhhhcCccccccccCCCCcccCCCCCCceEeeccCCCC-CCCCCCHHHHHHcCCC--
Q 017032 189 CSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAED-HDVPVTPDEIVKLGLM-- 265 (378)
Q Consensus 189 ~~miPlEvVvRn~atGS~~krl~~rY~~G~~~~~g~~lp~Gl~eg~~L~~PivE~ttK~d~-~Dp~Is~e~i~~lglv-- 265 (378)
|+|||||||||||+|||+ |+||. |+++|++|++|||||+||+|+ |||+||+++++++||+
T Consensus 91 ~~~iPlEvVvR~~atGS~----~kry~-------------gl~eg~~l~~Pi~e~~~K~d~~hDp~Is~e~~~~~g~~~~ 153 (425)
T 2h31_A 91 CEMIPIEWVCRRIATGSF----LKRNP-------------GVKEGYKFYPPKVELFFKDDANNDPQWSEEQLIAAKFCFA 153 (425)
T ss_dssp EEECSCEEEEESBCCHHH----HHHST-------------TCCTTCBCSSCCEEEESCCCSSCCCCBCHHHHHTTTCEET
T ss_pred ccEeeEEEEEEeeeechh----HHhcc-------------CCCCCCcCCCCeeeeEeecccCCCCCCCHHHHHHcCcccc
Confidence 999999999999999997 88883 467888999999999999997 9999999999999999
Q ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeeEeeec-CCCcEEEEeeccCCCCCcccccccchhhhhcCCCC
Q 017032 266 ----TEAEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKS-SDDSILLIDEVHTPDSSRYWIAHSYEERFQSGLEP 340 (378)
Q Consensus 266 ----t~ee~~~i~~~al~I~~iL~~~~~~~Gl~LVD~KlEFG~d-~~GeIvLaDEI~TPDS~RlWd~~t~e~rfr~g~~~ 340 (378)
+++|+++|+++|++||++++++|+++||+|||||||||++ .+|+|+|+||| ||||||||+++++ +
T Consensus 154 ~~~i~~ee~~~i~~~al~i~~~l~~~~~~~GiiLvD~K~EFG~~~~~G~ivLaDei-tPDs~R~W~~~~~---------~ 223 (425)
T 2h31_A 154 GLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDMKIEFGVDVTTKEIVLADVI-DNDSWRLWPSGDR---------S 223 (425)
T ss_dssp TEECCHHHHHHHHHHHHHHHHHHHHHHGGGSCEEEEEEECEEEETTTCCEEECSCC-CTTSEEEECCC------------
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEecCCCeEEEEEee-CCCccccccCCCC---------C
Confidence 9999999999999999999999999999999999999999 69999999999 9999999999874 3
Q ss_pred CCCcHHHHHHHHHh
Q 017032 341 ENVDKEFLRLWFKD 354 (378)
Q Consensus 341 ~~~DKq~~R~w~~~ 354 (378)
+++|||+||+|+.-
T Consensus 224 ~~~DK~~~R~~~~~ 237 (425)
T 2h31_A 224 QQKDKQSYRDLKEV 237 (425)
T ss_dssp --------------
T ss_pred CcccHHHHHhcccc
Confidence 68999999999864
No 11
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=28.69 E-value=31 Score=26.52 Aligned_cols=26 Identities=12% Similarity=0.023 Sum_probs=22.6
Q ss_pred CcccccccceeeecCCeEEEEEcCCc
Q 017032 114 KSKTRGKVRDIYDGGDYLVLVTTDRQ 139 (378)
Q Consensus 114 ~~lyeGKvKdVY~~~d~ll~~fkDri 139 (378)
.+.|.|+++.|....+.++++|-|..
T Consensus 27 Gl~Y~gtI~~V~~~~gtC~V~F~D~s 52 (66)
T 2eqj_A 27 GLFYLGTIKKINILKQSCFIIFEDSS 52 (66)
T ss_dssp SCEEEEEEEEEETTTTEEEEEETTTE
T ss_pred CcEEEeEEEEEccCCcEEEEEEccCC
Confidence 68899999999988888999998754
No 12
>2nn6_E Exosome complex exonuclease RRP42; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: d.14.1.4 d.101.1.1
Probab=24.01 E-value=16 Score=34.68 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=12.3
Q ss_pred cCcccccccccchhhHHhhccchhhhHHhHHHhhh
Q 017032 64 QNQNHHHHQQHLSLDAVISSNRKAELLGDIKGSLS 98 (378)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (378)
+.++||||.|..-.+..++...++-+...+.+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~s~~e~~~i~~~l~~~~R 37 (305)
T 2nn6_E 3 SSHHHHHHSQDPMASVTLSEAEKVYIVHGVQEDLR 37 (305)
T ss_dssp ----------------CCCHHHHHHHHHHHHTTCC
T ss_pred ccccccccccCCccccccChhHHHHHHHHHhcCCC
Confidence 34556666666555666666667766677665544
No 13
>2a1j_B DNA excision repair protein ERCC-1; XPF, xeroderma pigmentosum, DNA repair, endonuclease, helix-hairpin-helix, DNA binding protein; HET: DNA; 2.70A {Homo sapiens} SCOP: a.60.2.5
Probab=22.46 E-value=31 Score=26.67 Aligned_cols=29 Identities=17% Similarity=0.458 Sum_probs=10.7
Q ss_pred ccccccccchhhHHhhccchhhhHHhHHHh
Q 017032 67 NHHHHQQHLSLDAVISSNRKAELLGDIKGS 96 (378)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (378)
+||||+.|.+.| .|...++.++.......
T Consensus 5 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 33 (91)
T 2a1j_B 5 HHHHHHSQDPAD-LLMEKLEQDFVSRVTEC 33 (91)
T ss_dssp --------CCSH-HHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCHH-HHhhhccCCHHHHHHHH
Confidence 455666666666 44444555555544333
Done!