Query 017033
Match_columns 378
No_of_seqs 217 out of 366
Neff 5.9
Searched_HMMs 46136
Date Fri Mar 29 05:01:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017033.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017033hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03407 Nucleotid_trans: Nucl 100.0 6.5E-42 1.4E-46 316.3 19.7 201 118-318 1-212 (212)
2 cd02537 GT8_Glycogenin Glycoge 98.1 7.9E-05 1.7E-09 70.8 15.0 189 92-306 8-206 (240)
3 PF05637 Glyco_transf_34: gala 98.0 8.3E-06 1.8E-10 78.0 5.4 164 133-308 34-232 (239)
4 cd04194 GT8_A4GalT_like A4GalT 97.9 0.00026 5.6E-09 67.0 13.0 203 88-307 3-241 (248)
5 cd00505 Glyco_transf_8 Members 97.7 0.0019 4.2E-08 61.2 16.8 134 167-307 81-239 (246)
6 PLN00176 galactinol synthase 97.4 0.0018 4E-08 64.9 12.8 225 84-330 21-293 (333)
7 PLN03181 glycosyltransferase; 97.4 0.015 3.3E-07 59.6 19.3 144 133-292 158-329 (453)
8 PLN03182 xyloglucan 6-xylosylt 97.4 0.0016 3.4E-08 66.5 11.8 161 133-308 157-359 (429)
9 cd06914 GT8_GNT1 GNT1 is a fun 97.0 0.003 6.5E-08 61.9 9.2 107 170-288 81-190 (278)
10 cd06430 GT8_like_2 GT8_like_2 96.7 0.021 4.6E-07 56.7 12.0 148 176-329 90-276 (304)
11 PF01501 Glyco_transf_8: Glyco 96.6 0.0033 7.1E-08 58.0 5.7 132 166-307 83-241 (250)
12 cd06431 GT8_LARGE_C LARGE cata 96.1 0.033 7.1E-07 54.6 9.3 150 175-332 89-271 (280)
13 cd06432 GT8_HUGT1_C_like The C 94.6 0.16 3.5E-06 48.8 8.5 125 174-307 86-239 (248)
14 PRK15171 lipopolysaccharide 1, 94.1 0.76 1.7E-05 46.1 12.3 107 169-285 107-235 (334)
15 PF03314 DUF273: Protein of un 93.8 0.37 8E-06 45.6 8.8 95 166-268 25-126 (222)
16 COG1442 RfaJ Lipopolysaccharid 93.2 0.97 2.1E-05 45.5 11.3 172 88-269 5-201 (325)
17 cd06429 GT8_like_1 GT8_like_1 92.0 0.68 1.5E-05 44.9 8.2 103 185-307 116-235 (257)
18 PLN02910 polygalacturonate 4-a 85.4 3.9 8.4E-05 44.4 8.7 159 157-330 449-644 (657)
19 PLN02829 Probable galacturonos 84.5 4.3 9.3E-05 44.1 8.6 158 158-330 432-626 (639)
20 PLN02867 Probable galacturonos 82.4 4.3 9.4E-05 43.4 7.5 159 159-330 321-522 (535)
21 PLN02718 Probable galacturonos 80.9 8.4 0.00018 41.8 9.1 148 169-330 405-590 (603)
22 PLN02659 Probable galacturonos 78.4 9.5 0.0002 40.8 8.5 157 160-330 321-520 (534)
23 PLN02870 Probable galacturonos 71.2 12 0.00026 40.1 7.0 155 162-330 322-519 (533)
24 PLN02523 galacturonosyltransfe 67.9 8.5 0.00018 41.3 5.1 156 160-330 354-546 (559)
25 KOG4748 Subunit of Golgi manno 65.6 7.1 0.00015 39.8 3.9 179 133-332 132-350 (364)
26 PLN02742 Probable galacturonos 62.2 46 0.001 35.8 9.3 158 160-330 330-522 (534)
27 PLN02769 Probable galacturonos 56.4 43 0.00093 36.7 8.0 157 161-330 430-617 (629)
28 PLN02331 phosphoribosylglycina 53.9 92 0.002 29.3 8.9 44 100-147 10-56 (207)
29 cd08579 GDPD_memb_like Glycero 48.0 2.2E+02 0.0049 26.1 12.1 70 68-142 80-149 (220)
30 PRK05647 purN phosphoribosylgl 46.5 1.5E+02 0.0033 27.5 9.1 54 85-148 3-59 (200)
31 PF11051 Mannosyl_trans3: Mann 42.9 13 0.00029 36.0 1.5 19 185-203 93-111 (271)
32 TIGR00639 PurN phosphoribosylg 40.8 2.6E+02 0.0056 25.8 9.6 53 86-148 3-58 (190)
33 COG1512 Beta-propeller domains 33.1 2.4E+02 0.0052 27.8 8.5 62 66-130 44-109 (271)
34 COG0299 PurN Folate-dependent 31.1 4.6E+02 0.01 24.8 10.2 54 85-148 2-58 (200)
35 PF02484 Rhabdo_NV: Rhabdoviru 30.9 60 0.0013 26.9 3.2 22 177-198 19-40 (111)
36 TIGR00524 eIF-2B_rel eIF-2B al 24.3 2.6E+02 0.0057 27.8 7.2 58 83-147 117-185 (303)
37 PRK13010 purU formyltetrahydro 22.1 7.7E+02 0.017 24.3 11.4 45 100-148 104-149 (289)
38 PRK06975 bifunctional uroporph 20.2 7.8E+02 0.017 27.2 10.4 62 71-146 44-105 (656)
No 1
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=100.00 E-value=6.5e-42 Score=316.34 Aligned_cols=201 Identities=31% Similarity=0.591 Sum_probs=173.2
Q ss_pred cccCcEEEEEcChHHHHHhHhcCCcEEEecCCCCCCCcchhccccHHHHHHHHHHHHHHHHHHHcCCcEEEeeccEEecc
Q 017033 118 KLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQ 197 (378)
Q Consensus 118 ~l~~~llVvAlD~~a~~~c~~~g~~cy~~~~~~~d~~~~~~~f~s~~yl~m~w~K~~~l~~vL~lGy~vLftDvDVVWlR 197 (378)
++++|++|+|+|+++++.|++.|++|+.......+.......|+++.|.+++|.|+.+++++|++||+|+|+|+||||+|
T Consensus 1 ~~~~~~lv~a~D~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~ 80 (212)
T PF03407_consen 1 HLIDNFLVVALDEETYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLR 80 (212)
T ss_pred CccccEEEEEECHHHHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEec
Confidence 46899999999999999999999999887764222332378999999999999999999999999999999999999999
Q ss_pred Cccccc-CCCCcEEEeccCCCCCC-CCCCCCCCceEEEEeeCHHHHHHHHHHHHHHhcCCCCCchHHHHHHHcCCCCCCC
Q 017033 198 NPFQRF-DPDADFQIACDRFSGNS-FNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKI 275 (378)
Q Consensus 198 nPfp~~-~~~aDi~issD~~~g~~-~d~~~~~NtGf~yvRst~rti~f~~~W~~~r~~~p~~~DQ~vfN~il~~~~~~~~ 275 (378)
||+++| ++++|+++++|...+.+ ...++.+|+||||+|+|++|++|++.|.......++.+||.+||.++........
T Consensus 81 dp~~~~~~~~~Di~~~~d~~~~~~~~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~~~~~DQ~~~n~~l~~~~~~~~ 160 (212)
T PF03407_consen 81 DPLPYFENPDADILFSSDGWDGTNSDRNGNLVNTGFYYFRPTPRTIAFLEDWLERMAESPGCWDQQAFNELLREQAARYG 160 (212)
T ss_pred CcHHhhccCCCceEEecCCCcccchhhcCCccccceEEEecCHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHhcccCCc
Confidence 999999 88999999999887653 3345568999999999999999999999988888888999999999965433337
Q ss_pred ceEEEEccccccC----Cccc-ccC-C---CCceEEEEecccCChhhHHHHH
Q 017033 276 QVKIRFLDTKYIA----GFCQ-VSQ-D---FNAVCTMHANCCFGLEAKITDL 318 (378)
Q Consensus 276 gl~v~~Ld~~~F~----Gfcq-~~k-d---~~~~~tvHaNc~~G~~~K~~~L 318 (378)
++++++||+.+|+ .|++ ... . ..+|++||+|||.|.++|+++|
T Consensus 161 ~~~~~~L~~~~f~~g~~~f~~~~~~~~~~~~~~p~~vH~n~~~g~~~K~~~~ 212 (212)
T PF03407_consen 161 GLRVRFLPPSLFPNGHGYFCQSRDWAWVPTKNKPYIVHANCCDGKEGKRQRF 212 (212)
T ss_pred CcEEEEeCHHHeeccccceeecchhhhhccccccceEEEcCCCChHhHHhhC
Confidence 9999999999994 3777 211 1 3579999999999999999886
No 2
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=98.13 E-value=7.9e-05 Score=70.85 Aligned_cols=189 Identities=19% Similarity=0.132 Sum_probs=108.1
Q ss_pred ecccccCCCchHHHHHHHhhhccCCccccCcEEEEE---cChHHHHHhHhcCCcEEEecCCCCCCCcchhccccHHHHHH
Q 017033 92 LNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVA---LDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEM 168 (378)
Q Consensus 92 ~N~a~a~p~s~lDlfLes~r~g~~t~~l~~~llVvA---lD~~a~~~c~~~g~~cy~~~~~~~d~~~~~~~f~s~~yl~m 168 (378)
+|.+|+.+ +-..+.|++.. .. . . +++|+. +.++..+.+++.+..+..+.. .+... ........+.+.
T Consensus 8 ~~~~Y~~~---a~vl~~SL~~~-~~-~-~-~~~vl~~~~is~~~~~~L~~~~~~~~~v~~--i~~~~-~~~~~~~~~~~~ 77 (240)
T cd02537 8 TNDDYLPG---ALVLGYSLRKV-GS-S-Y-DLVVLVTPGVSEESREALEEVGWIVREVEP--IDPPD-SANLLKRPRFKD 77 (240)
T ss_pred cChhHHHH---HHHHHHHHHhc-CC-C-C-CEEEEECCCCCHHHHHHHHHcCCEEEecCc--cCCcc-hhhhccchHHHH
Confidence 45577521 22345566542 11 1 2 344443 346667888888866655442 22211 111123346677
Q ss_pred HHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCCCcEEEeccCCCCCCCCCCCCCCceEEEEeeCHHHHHHHHHH
Q 017033 169 MWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFW 247 (378)
Q Consensus 169 ~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~aDi~issD~~~g~~~d~~~~~NtGf~yvRst~rti~f~~~W 247 (378)
+|.|+.+... .+| .||+.|+|++.++|+-+.|..+..+....|... ....|+||+.++++....+-+.+.
T Consensus 78 ~~~kl~~~~l---~~~drvlylD~D~~v~~~i~~Lf~~~~~~~a~~d~~~------~~~fNsGv~l~~~~~~~~~~~~~~ 148 (240)
T cd02537 78 TYTKLRLWNL---TEYDKVVFLDADTLVLRNIDELFDLPGEFAAAPDCGW------PDLFNSGVFVLKPSEETFNDLLDA 148 (240)
T ss_pred HhHHHHhccc---cccceEEEEeCCeeEccCHHHHhCCCCceeeecccCc------cccccceEEEEcCCHHHHHHHHHH
Confidence 8889776652 256 599999999999998887765222333333211 356899999999987665544443
Q ss_pred HHHHhcCCCCCchHHHHHHHcCCCCCCCceEEEEccccc-c-CCcccc-c---CCCCceEEEEec
Q 017033 248 YNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKY-I-AGFCQV-S---QDFNAVCTMHAN 306 (378)
Q Consensus 248 ~~~r~~~p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~-F-~Gfcq~-~---kd~~~~~tvHaN 306 (378)
...... ...+||+++|.+.... | .++.||..+ + .+++.. . .....+.++|=.
T Consensus 149 ~~~~~~-~~~~DQdiLN~~~~~~-----~-~~~~l~~~yN~~~~~~~~~~~~~~~~~~~~iiHf~ 206 (240)
T cd02537 149 LQDTPS-FDGGDQGLLNSYFSDR-----G-IWKRLPFTYNALKPLRYLHPEALWFGDEIKVVHFI 206 (240)
T ss_pred HhccCC-CCCCCHHHHHHHHcCC-----C-CEeECCcceeeehhhhccCchhhcccCCcEEEEEe
Confidence 332211 3458999999999431 1 567777663 1 122111 1 223567888854
No 3
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=97.99 E-value=8.3e-06 Score=77.97 Aligned_cols=164 Identities=15% Similarity=0.165 Sum_probs=34.6
Q ss_pred HHHhHhcCCcEEEecCCCCCCCcchhccccHHHHHHHHHHHHHHHHHHHcC---CcEEEeeccEEeccCccc---ccC-C
Q 017033 133 LDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMG---YNFVFTDADIVWLQNPFQ---RFD-P 205 (378)
Q Consensus 133 ~~~c~~~g~~cy~~~~~~~d~~~~~~~f~s~~yl~m~w~K~~~l~~vL~lG---y~vLftDvDVVWlRnPfp---~~~-~ 205 (378)
.++|+..|..+|.......+.. -....|.|+.++++.+..= ==|+|.|.|++...-=++ ++. +
T Consensus 34 ~~Ya~~HgY~~~~~~~~~~~~~----------~~~~~W~K~~~lr~~m~~~P~~~wv~~lD~Dali~n~~~~L~~~il~p 103 (239)
T PF05637_consen 34 VDYARRHGYDLYYRNIQEYDDP----------ERPGSWAKIPALRAAMKKYPEAEWVWWLDSDALIMNPDFSLEEHILSP 103 (239)
T ss_dssp HHHHHHHT-EEEEE-S--S--S----------HHHHHHTHHHHHHHHHHH-TT-SEEEEE-TTEEE--------------
T ss_pred HHHHHhcCCEEEEEChHHcCCC----------CCChhhHHHHHHHHHHHhCCCCCEEEEEcCCeEEEecccccccccccc
Confidence 6899999988887553221111 1345699999999999652 238999999987642233 111 0
Q ss_pred -CC------cEE-EeccCCCCC-----CC-------CCCCCCCceEEEEeeCHHHHHHHHHHHHHHhcCC-----CCCch
Q 017033 206 -DA------DFQ-IACDRFSGN-----SF-------NLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFP-----GLHDQ 260 (378)
Q Consensus 206 -~a------Di~-issD~~~g~-----~~-------d~~~~~NtGf~yvRst~rti~f~~~W~~~r~~~p-----~~~DQ 260 (378)
.- |.- +.-+...+. +. .-.+.+|+|+|++|.++-|+.|++.|..-+.... ...||
T Consensus 104 ~~L~~~~~r~~~~~p~~~~~~~~~~~~~~~~~li~t~d~~gLNtGsFliRns~ws~~fLd~w~~~~~~~~~~~~~~~~EQ 183 (239)
T PF05637_consen 104 SRLDSLLLRDVPIVPPDSIIKTYSVIDGNDIHLIITQDWNGLNTGSFLIRNSPWSRDFLDAWADPLYRNYDWDQLEFDEQ 183 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00 000 011111000 00 1124589999999999999999999987554322 34699
Q ss_pred HHHHHHHcCCCCCCCceEEEEccccccCCccccc---CCCCceEEEEeccc
Q 017033 261 DVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVS---QDFNAVCTMHANCC 308 (378)
Q Consensus 261 ~vfN~il~~~~~~~~gl~v~~Ld~~~F~Gfcq~~---kd~~~~~tvHaNc~ 308 (378)
.+|-.++... ....-++.+++...|..|.... .......++|-.-|
T Consensus 184 sAl~~ll~~~--~~~~~~~~~vpq~~~nsy~~~~~~~~~~~GDfvvhfaGC 232 (239)
T PF05637_consen 184 SALEHLLQWH--PEILSKVALVPQRWFNSYPEDECNYQYKEGDFVVHFAGC 232 (239)
T ss_dssp ---------------------------------------------------
T ss_pred cccccccccc--ccccccccccccccccccccccccccccccccccccccc
Confidence 9999888431 2234456788888886654432 22234467777666
No 4
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=97.86 E-value=0.00026 Score=66.99 Aligned_cols=203 Identities=19% Similarity=0.224 Sum_probs=108.5
Q ss_pred EEEEecccccCCCchHHHHHHHhhhccCCccccCcEEEEEcC--hHHHHHhHhc----CCcEEEecCCCCCCCcchhccc
Q 017033 88 IITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALD--SKALDHCLST----HPHCYALNTSGLDFSGKEAYFM 161 (378)
Q Consensus 88 IvT~~N~a~a~p~s~lDlfLes~r~g~~t~~l~~~llVvAlD--~~a~~~c~~~----g~~cy~~~~~~~d~~~~~~~f~ 161 (378)
|+.++|+.|..+ +-..+.|++.. ....--++.|++.| ++..+.+++. +..+-.......++.. . ...
T Consensus 3 I~~~~d~~y~~~---~~~~l~Sl~~~--~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~i~~~~~~~-~-~~~ 75 (248)
T cd04194 3 IVFAIDDNYAPY---LAVTIKSILAN--NSKRDYDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDNDDFKF-F-PAT 75 (248)
T ss_pred EEEEecHhhHHH---HHHHHHHHHhc--CCCCceEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEcCHHHHhc-C-Ccc
Confidence 677889888621 22355676542 21122345566644 6667777665 3232222221111111 0 001
Q ss_pred cHHHHHHHHHHHHHHHHHHHcCCc-EEEeeccEEeccCcccccCCC---CcEEEeccCCCCC---------CCCCCCCCC
Q 017033 162 TSSYLEMMWIRIRLLSDVLAMGYN-FVFTDADIVWLQNPFQRFDPD---ADFQIACDRFSGN---------SFNLRNEPN 228 (378)
Q Consensus 162 s~~yl~m~w~K~~~l~~vL~lGy~-vLftDvDVVWlRnPfp~~~~~---aDi~issD~~~g~---------~~d~~~~~N 228 (378)
...|..++..|+.+ -+++. +|+ ||+.|+|++-++|+-+.+..+ .-+....|.+... ........|
T Consensus 76 ~~~~~~~~y~rl~l-~~ll~-~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfN 153 (248)
T cd04194 76 TDHISYATYYRLLI-PDLLP-DYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKRKRRLGGYDDGSYFN 153 (248)
T ss_pred cccccHHHHHHHHH-HHHhc-ccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHHHhhcCCCcccceee
Confidence 22233445556544 44555 674 999999999999988877542 3344455654310 011234689
Q ss_pred ceEEEEeeCHHH-HHHHHHHHHHHhcC---CCCCchHHHHHHHcCCCCCCCceEEEEccccc--cCCccccc--------
Q 017033 229 GGFNYVKSNNRT-IEFYKFWYNSRKMF---PGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKY--IAGFCQVS-------- 294 (378)
Q Consensus 229 tGf~yvRst~rt-i~f~~~W~~~r~~~---p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~--F~Gfcq~~-------- 294 (378)
+|+|.+..+.-. ..+.+.+.+..... ....||++||.+... +++.||..+ ..+.+...
T Consensus 154 sGv~l~nl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~--------~~~~L~~~~N~~~~~~~~~~~~~~~~~ 225 (248)
T cd04194 154 SGVLLINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKD--------KILYLPPRYNFQTGFYYLLKKKSKEEQ 225 (248)
T ss_pred ecchheeHHHHHHhhhHHHHHHHHHhCCCceeeCChHHHHHHHhC--------CeEEcCcccccchhHhHHhhccchhHH
Confidence 999999766422 23333333322222 346899999999943 168888653 22322211
Q ss_pred ---CCCCceEEEEecc
Q 017033 295 ---QDFNAVCTMHANC 307 (378)
Q Consensus 295 ---kd~~~~~tvHaNc 307 (378)
.....+.++|-+.
T Consensus 226 ~~~~~~~~~~iiHf~g 241 (248)
T cd04194 226 ELEEARKNPVIIHYTG 241 (248)
T ss_pred HHHHHhcCCEEEEeCC
Confidence 2245678888663
No 5
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=97.73 E-value=0.0019 Score=61.23 Aligned_cols=134 Identities=18% Similarity=0.171 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCC---CcEEEeccCCCCC----------CCCCCCCCCceEE
Q 017033 167 EMMWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPD---ADFQIACDRFSGN----------SFNLRNEPNGGFN 232 (378)
Q Consensus 167 ~m~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~---aDi~issD~~~g~----------~~d~~~~~NtGf~ 232 (378)
..++.|+. +-++|. .| .||+.|+|++-++|.-+.+.-+ .-+.+..|+.... ........|+|+|
T Consensus 81 ~~~y~RL~-i~~llp-~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~~yfNsGVm 158 (246)
T cd00505 81 IVTLTKLH-LPNLVP-DYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREGKYYRQKRSHLAGPDYFNSGVF 158 (246)
T ss_pred cceeHHHH-HHHHhh-ccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhccchhhcccCCCCCCCceeeeeE
Confidence 34555644 445567 77 4999999999999988777533 3344444543100 0011246899999
Q ss_pred EEeeCHHH-HHHHHHHHHHHh---cCCCCCchHHHHHHHcCCCCCCCceEEEEcccccc--CCccccc-----CCCCceE
Q 017033 233 YVKSNNRT-IEFYKFWYNSRK---MFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYI--AGFCQVS-----QDFNAVC 301 (378)
Q Consensus 233 yvRst~rt-i~f~~~W~~~r~---~~p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~F--~Gfcq~~-----kd~~~~~ 301 (378)
.+..+.-. ..+++....... ......||+++|.++.. .+.++..||..+= .+.+... +...++.
T Consensus 159 linl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~-----~~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~ 233 (246)
T cd00505 159 VVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQ-----VPFIVKSLPCIWNVRLTGCYRSLNCFKAFVKNAK 233 (246)
T ss_pred EEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhc-----CCCeEEECCCeeeEEecCccccccchhhhcCCCE
Confidence 99988874 444444333221 12467899999999843 2366788887531 2222221 2346789
Q ss_pred EEEecc
Q 017033 302 TMHANC 307 (378)
Q Consensus 302 tvHaNc 307 (378)
++|-+.
T Consensus 234 iiHy~g 239 (246)
T cd00505 234 VIHFNG 239 (246)
T ss_pred EEEeCC
Confidence 999664
No 6
>PLN00176 galactinol synthase
Probab=97.45 E-value=0.0018 Score=64.94 Aligned_cols=225 Identities=16% Similarity=0.163 Sum_probs=122.6
Q ss_pred CCeEEEEE--ecccccCCCchHHHHHHHhhhccCCccccCcEEEEEcC---hHHHHHhHhcCCcEEEecCCCCCCCcchh
Q 017033 84 DNTVIITT--LNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALD---SKALDHCLSTHPHCYALNTSGLDFSGKEA 158 (378)
Q Consensus 84 d~tVIvT~--~N~a~a~p~s~lDlfLes~r~g~~t~~l~~~llVvAlD---~~a~~~c~~~g~~cy~~~~~~~d~~~~~~ 158 (378)
.+...||+ +|..|. +|. + ....|++.. ++ -..++|+..+ ++..+++++.|......+ .........
T Consensus 21 ~~~AyVT~L~~n~~Y~-~Ga-~-vL~~SLr~~-~s---~~~lVvlVt~dVp~e~r~~L~~~g~~V~~V~--~i~~~~~~~ 91 (333)
T PLN00176 21 AKRAYVTFLAGNGDYV-KGV-V-GLAKGLRKV-KS---AYPLVVAVLPDVPEEHRRILVSQGCIVREIE--PVYPPENQT 91 (333)
T ss_pred CceEEEEEEecCcchH-HHH-H-HHHHHHHHh-CC---CCCEEEEECCCCCHHHHHHHHHcCCEEEEec--ccCCccccc
Confidence 46777773 577885 232 2 255677642 22 2345555544 355666776664443322 221111122
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCCC-cEEEeccCCCCC-----------------
Q 017033 159 YFMTSSYLEMMWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPDA-DFQIACDRFSGN----------------- 219 (378)
Q Consensus 159 ~f~s~~yl~m~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~a-Di~issD~~~g~----------------- 219 (378)
.|. ..+..+.|.|+++.. +. .| .+|+.|+|++-++|--+.|.... -+....|++...
T Consensus 92 ~~~-~~~~~i~~tKl~iw~-l~--~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~ 167 (333)
T PLN00176 92 QFA-MAYYVINYSKLRIWE-FV--EYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCP 167 (333)
T ss_pred ccc-cchhhhhhhhhhhcc-cc--ccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccch
Confidence 332 235566788888554 33 36 59999999999999877775322 244444544210
Q ss_pred -----CCC----CCCCCCceEEEEeeCHHHHHHHHHHHHHHhcCCCCCchHHHHHHHcCCCCCCCceEEEEcccccc-C-
Q 017033 220 -----SFN----LRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYI-A- 288 (378)
Q Consensus 220 -----~~d----~~~~~NtGf~yvRst~rti~f~~~W~~~r~~~p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~F-~- 288 (378)
+.. ....+|+|++.+.|+..+-+-+-+...... .-...||++||.++.. +++.||..|= -
T Consensus 168 ~~~~wp~~~g~~~~~yFNSGVlvinps~~~~~~ll~~l~~~~-~~~f~DQD~LN~~F~~--------~~~~Lp~~YN~~~ 238 (333)
T PLN00176 168 DKVTWPAELGPPPPLYFNAGMFVFEPSLSTYEDLLETLKITP-PTPFAEQDFLNMFFRD--------IYKPIPPVYNLVL 238 (333)
T ss_pred hhccchhhccCCCCCeEEeEEEEEEcCHHHHHHHHHHHHhcC-CCCCCCHHHHHHHHcC--------cEEECCchhcCch
Confidence 001 123689999999999887443333332111 1235899999999943 2456665431 1
Q ss_pred C-cccc--cCCCCceEEEEecccC-------C--hhhHHHHHHHHHH-HHHhhcc
Q 017033 289 G-FCQV--SQDFNAVCTMHANCCF-------G--LEAKITDLRLALE-DWRNFME 330 (378)
Q Consensus 289 G-fcq~--~kd~~~~~tvHaNc~~-------G--~~~K~~~Lr~vl~-dWk~y~~ 330 (378)
+ ++.. ..+..++.+||-.... | ..-++.+.+.+++ -|..|-.
T Consensus 239 ~~~~~~~~~~~~~~vkIIHY~~~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~ 293 (333)
T PLN00176 239 AMLWRHPENVELDKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYND 293 (333)
T ss_pred hhhhhChhhcccCCcEEEEeeCCCCCCCCCCCcccCCChHHHHHHHHHHHHHhcc
Confidence 1 1111 1124577888874211 1 1234567777775 5555543
No 7
>PLN03181 glycosyltransferase; Provisional
Probab=97.44 E-value=0.015 Score=59.59 Aligned_cols=144 Identities=15% Similarity=0.276 Sum_probs=91.4
Q ss_pred HHHhHhcCCcEEEecCCCCCCCcchhccccHHHHHHHHHHHHHHHHHHHcC---CcEEEeeccEEeccCccccc----CC
Q 017033 133 LDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMG---YNFVFTDADIVWLQNPFQRF----DP 205 (378)
Q Consensus 133 ~~~c~~~g~~cy~~~~~~~d~~~~~~~f~s~~yl~m~w~K~~~l~~vL~lG---y~vLftDvDVVWlRnPfp~~----~~ 205 (378)
.++|+..|..+|..... +.. . ....|.|+-+++.++..= -=|.+.|.|.+.. ||-.-+ +.
T Consensus 158 ~dYArrHGY~lf~~~a~---Ld~--------~-~p~~WaKipalRaAM~a~PeAEWfWWLDsDALIM-Np~~sLPl~ry~ 224 (453)
T PLN03181 158 VDYCRIHGYDIFYNNAL---LHP--------K-MNSYWAKLPVVRAAMLAHPEAEWIWWVDSDAVFT-DMDFKLPLHRYR 224 (453)
T ss_pred HHHHHHhCCcEEEeccc---cCc--------c-CchhhhHHHHHHHHHHHCCCceEEEEecCCceee-cCCCCCCHhhcC
Confidence 47899999888755431 111 0 245899999999887652 2488999999876 552222 22
Q ss_pred CCcEEEeccCCCCCCC--CCCCCCCceEEEEeeCHHHHHHHHHHHHHHhc-------------------CCCCCchHHHH
Q 017033 206 DADFQIACDRFSGNSF--NLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKM-------------------FPGLHDQDVLN 264 (378)
Q Consensus 206 ~aDi~issD~~~g~~~--d~~~~~NtGf~yvRst~rti~f~~~W~~~r~~-------------------~p~~~DQ~vfN 264 (378)
+..+++- ++...-. .--+.+|+|.|++|.+.-+.+|++.|..+-.+ .+...||.+|-
T Consensus 225 ~~NLvvh--g~p~~vy~~qdw~GlN~GsFLIRNcqWSl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLv 302 (453)
T PLN03181 225 DHNLVVH--GWPKLIYEKRSWTALNAGVFLIRNCQWSLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALV 302 (453)
T ss_pred Ccccccc--CCcccccccccccccceeeeEEecCHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHH
Confidence 2333321 1110000 11245899999999999999999999874221 34678999998
Q ss_pred HHHcCCCCCCCceEEEEccccccCCccc
Q 017033 265 EIKFDPYIQKIQVKIRFLDTKYIAGFCQ 292 (378)
Q Consensus 265 ~il~~~~~~~~gl~v~~Ld~~~F~Gfcq 292 (378)
.++-.+ -.+-+-+|.+=..-||-||+-
T Consensus 303 yll~~~-~~~w~~k~ylE~~yy~~GyW~ 329 (453)
T PLN03181 303 YLLYKH-KEKWGDKIYLEGEYYFEGYWA 329 (453)
T ss_pred HHHHhc-cchhccceeeecceeeeeeHH
Confidence 776321 234567777667777778753
No 8
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=97.40 E-value=0.0016 Score=66.51 Aligned_cols=161 Identities=14% Similarity=0.189 Sum_probs=102.9
Q ss_pred HHHhHhcCCcEEEecCCCCCCCcchhccccHHHHHHHHHHHHHHHHHHHcCC---cEEEeeccEEeccCccccc---CCC
Q 017033 133 LDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGY---NFVFTDADIVWLQNPFQRF---DPD 206 (378)
Q Consensus 133 ~~~c~~~g~~cy~~~~~~~d~~~~~~~f~s~~yl~m~w~K~~~l~~vL~lGy---~vLftDvDVVWlRnPfp~~---~~~ 206 (378)
.++|+..|..++. .... +.. + ..-.|.|+-++++++...- =|.+.|.|.+.+--+|..- +.+
T Consensus 157 ~dYAr~HGY~~fy-n~~~--ld~-~--------~p~~WaKlpaLR~aM~~~PeaEWiWWLDsDALImNmsfelPlery~~ 224 (429)
T PLN03182 157 IDYCRLHGIEIFY-NMAH--LDA-E--------MAGFWAKLPLLRKLMLAHPEVEWIWWMDSDALFTDMTFEIPLEKYEG 224 (429)
T ss_pred HHHHHHhCCEEEe-ehhh--cCc-C--------CCcchhHHHHHHHHHHHCCCceEEEEecCCceeecCCCCCCHhHcCC
Confidence 3677777877665 3211 111 0 1235999999999987632 3788999998865433321 123
Q ss_pred CcEEEeccCCCCCC--CCCCCCCCceEEEEeeCHHHHHHHHHHHHHHhc-------------------CCCCCchHHHHH
Q 017033 207 ADFQIACDRFSGNS--FNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKM-------------------FPGLHDQDVLNE 265 (378)
Q Consensus 207 aDi~issD~~~g~~--~d~~~~~NtGf~yvRst~rti~f~~~W~~~r~~-------------------~p~~~DQ~vfN~ 265 (378)
.++++- ++...- ..-.+.+|+|.|++|.++-+++|++.|..+..+ .+...||.+|-.
T Consensus 225 ~NlVih--g~~~~l~~~kdW~GLNtGsFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvy 302 (429)
T PLN03182 225 YNLVIH--GWDELVYDQKSWIGLNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVY 302 (429)
T ss_pred cCeeec--cchhhheeccccCccceeeEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHH
Confidence 334431 111110 001245899999999999999999999876541 235789999998
Q ss_pred HHcCCCCCCCceEEEEccccccCCcccc--------------c-CCCCceEEEEeccc
Q 017033 266 IKFDPYIQKIQVKIRFLDTKYIAGFCQV--------------S-QDFNAVCTMHANCC 308 (378)
Q Consensus 266 il~~~~~~~~gl~v~~Ld~~~F~Gfcq~--------------~-kd~~~~~tvHaNc~ 308 (378)
++..+ -.+-+-++.+-+..||-||+.. . .|-..|++.|-.-|
T Consensus 303 Ll~~~-~~~w~~kv~le~~y~l~Gyw~~iv~~yee~~~~~~~g~gd~rwPfvtHF~Gc 359 (429)
T PLN03182 303 LLLTQ-RERWGDKVYLENSYYLHGYWVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVGC 359 (429)
T ss_pred HHHhc-chhhccceEEeecceeccccHHHHHHHHHHHHhcCCCCCCcccceeEeeccc
Confidence 88431 2345778888888889887631 1 23456788887655
No 9
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=97.04 E-value=0.003 Score=61.93 Aligned_cols=107 Identities=12% Similarity=0.040 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCC-CcEEEeccCCCCCCCCCCCCCCceEEEEeeCHHHHHHH-HH
Q 017033 170 WIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPD-ADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFY-KF 246 (378)
Q Consensus 170 w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~-aDi~issD~~~g~~~d~~~~~NtGf~yvRst~rti~f~-~~ 246 (378)
+.|+.+... ..| .|||.|+|++-++|--+.|..+ ..-..+.+. ....|+|+|.+.|+..+-.=+ +.
T Consensus 81 ~tKl~~~~l---~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~~--------~~~FNSGvmvi~ps~~~~~~l~~~ 149 (278)
T cd06914 81 LTKLRAFNQ---TEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPRA--------YWKFASHLMVIKPSKEAFKELMTE 149 (278)
T ss_pred HHHHHhccc---cceeeEEEecCChhhhcChHHHhcCCcccceeeecC--------cceecceeEEEeCCHHHHHHHHHH
Confidence 567766555 357 5999999999999877777543 111112111 126899999999999885444 33
Q ss_pred HHHHHhcCCCCCchHHHHHHHcCCCCCCCceEEEEccccccC
Q 017033 247 WYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIA 288 (378)
Q Consensus 247 W~~~r~~~p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~F~ 288 (378)
-........+..||+++|.++.. .......++.+||...++
T Consensus 150 ~~~~~~~~~~~~DQdiLN~~~~~-~~~~~~~~~~~Lp~~~y~ 190 (278)
T cd06914 150 ILPAYLNKKNEYDMDLINEEFYN-SKQLFKPSVLVLPHRQYG 190 (278)
T ss_pred HHHhcccCCCCCChHHHHHHHhC-CccccCcceEEcCccccc
Confidence 33322223357899999999943 323345668888887664
No 10
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=96.70 E-value=0.021 Score=56.72 Aligned_cols=148 Identities=15% Similarity=0.212 Sum_probs=88.4
Q ss_pred HHHHHHcCC-cEEEeeccEEeccCcccccCC--CC-c--EEEe-ccCC------C----CCCCCCCCCCCceEEEEeeCH
Q 017033 176 LSDVLAMGY-NFVFTDADIVWLQNPFQRFDP--DA-D--FQIA-CDRF------S----GNSFNLRNEPNGGFNYVKSNN 238 (378)
Q Consensus 176 l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~--~a-D--i~is-sD~~------~----g~~~d~~~~~NtGf~yvRst~ 238 (378)
+-++|. -+ .||+.|+||+.++|.-+.+.. +. | +... .|.. . ..+.......|+|++++-=+.
T Consensus 90 ip~lLp-~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~~~~~~~~~~~~gFNSGVmLmNL~~ 168 (304)
T cd06430 90 LPSLLP-DVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSGVMLMNLTR 168 (304)
T ss_pred HHHHhh-hhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhhhhcccCcccccccccceeeeeHHH
Confidence 444555 33 799999999999987766543 21 1 2222 1221 1 111111124899999984332
Q ss_pred HH------------HHHHHHHHHHHhcCC---CCCchHHHHHHHcCCCCCCCceEEEEccccc--cCCccccc-----CC
Q 017033 239 RT------------IEFYKFWYNSRKMFP---GLHDQDVLNEIKFDPYIQKIQVKIRFLDTKY--IAGFCQVS-----QD 296 (378)
Q Consensus 239 rt------------i~f~~~W~~~r~~~p---~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~--F~Gfcq~~-----kd 296 (378)
-- ..+-+.|.....++. ...||++||.++.+ ..-++.+||..+ -+..|+++ ++
T Consensus 169 wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN~v~~~-----~p~~~~~Lp~~wN~~~d~~~y~~~~~~~~ 243 (304)
T cd06430 169 MRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHH-----NPEMLYVFPCHWNYRPDHCMYGSNCKAAE 243 (304)
T ss_pred HHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHHHHHcC-----CCCeEEEcCccccCCccceeecccccccc
Confidence 11 223334444333333 36899999999943 233467777642 23556542 34
Q ss_pred CCceEEEEecccCChhhHHHHHHHHHHHHHhhc
Q 017033 297 FNAVCTMHANCCFGLEAKITDLRLALEDWRNFM 329 (378)
Q Consensus 297 ~~~~~tvHaNc~~G~~~K~~~Lr~vl~dWk~y~ 329 (378)
...+-++|.|--.-++.|.-.+|.+-..-+.|.
T Consensus 244 ~~~~~~~H~n~~~~~~~~~~~f~~~~~~~~~~~ 276 (304)
T cd06430 244 EEGVFILHGNRGVYHSDKQPAFRAVYEAIREYT 276 (304)
T ss_pred cccceEEEcCCCCCCCccchHHHHHHHHHHhcc
Confidence 467889999966557899999999877666665
No 11
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=96.64 E-value=0.0033 Score=58.05 Aligned_cols=132 Identities=18% Similarity=0.183 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHHHHcCCc-EEEeeccEEeccCcccccCC---CCcEEEeccC-----CCCC-------CCCCCCCCCc
Q 017033 166 LEMMWIRIRLLSDVLAMGYN-FVFTDADIVWLQNPFQRFDP---DADFQIACDR-----FSGN-------SFNLRNEPNG 229 (378)
Q Consensus 166 l~m~w~K~~~l~~vL~lGy~-vLftDvDVVWlRnPfp~~~~---~aDi~issD~-----~~g~-------~~d~~~~~Nt 229 (378)
..+++.|+.+- ++| ..|+ +||.|+|++-++|.-..|.. +.-+....|. +... ........|+
T Consensus 83 ~~~~~~rl~i~-~ll-~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~fNs 160 (250)
T PF01501_consen 83 SPATFARLFIP-DLL-PDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFPFSERKQPGNKPYFNS 160 (250)
T ss_dssp GGGGGGGGGHH-HHS-TTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTSSEEECESTTTTSEEE
T ss_pred cHHHHHHhhhH-HHH-hhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccchhhcccCcccccccC
Confidence 34455576444 444 5664 99999999999999877752 2223333330 0000 0122457899
Q ss_pred eEEEEeeCHHHHHHHHHH-HHHHhcCC---CCCchHHHHHHHcCCCCCCCceEEEEcccccc--CCcc-----cccCCCC
Q 017033 230 GFNYVKSNNRTIEFYKFW-YNSRKMFP---GLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYI--AGFC-----QVSQDFN 298 (378)
Q Consensus 230 Gf~yvRst~rti~f~~~W-~~~r~~~p---~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~F--~Gfc-----q~~kd~~ 298 (378)
|++.+.++.-..+-+... ........ ...||++||.++.. +++.||..+- .+.+ .......
T Consensus 161 Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~--------~~~~L~~~~N~~~~~~~~~~~~~~~~~~ 232 (250)
T PF01501_consen 161 GVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFYG--------NIKPLPCRYNCQPSWYNQSDDYFNPILE 232 (250)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTT--------GEEEEEGGGSEEHHHHHHTHHHHHHHGC
T ss_pred cEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhccc--------eeEEECchhccccccccccchhhHhhcC
Confidence 999999887776544433 33322232 46899999999942 3567776532 1222 1123346
Q ss_pred ceEEEEecc
Q 017033 299 AVCTMHANC 307 (378)
Q Consensus 299 ~~~tvHaNc 307 (378)
++.++|-..
T Consensus 233 ~~~iiHy~g 241 (250)
T PF01501_consen 233 DAKIIHYSG 241 (250)
T ss_dssp C-SEEE--S
T ss_pred CeEEEEeCC
Confidence 677888654
No 12
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=96.08 E-value=0.033 Score=54.58 Aligned_cols=150 Identities=15% Similarity=0.149 Sum_probs=79.3
Q ss_pred HHHHHHHcCC-cEEEeeccEEeccCcccccCC-----CCcEEEec-cC---CCCC------C-CCCCCCCCceEEEEe--
Q 017033 175 LLSDVLAMGY-NFVFTDADIVWLQNPFQRFDP-----DADFQIAC-DR---FSGN------S-FNLRNEPNGGFNYVK-- 235 (378)
Q Consensus 175 ~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~-----~aDi~iss-D~---~~g~------~-~d~~~~~NtGf~yvR-- 235 (378)
++-++|..-+ .||+.|+|+|...|.-+.+.. +.-+.... |. +.+. + ...+..+|+|++++-
T Consensus 89 ~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~yFNsGVmlinL~ 168 (280)
T cd06431 89 VLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLDLD 168 (280)
T ss_pred HHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCcccccceeeeeeeeeHH
Confidence 4566675445 699999999999999877643 11222222 21 1111 1 112347999999984
Q ss_pred ---eCHHHHHHHHHHHHHHh--cCCCCCchHHHHHHHcCCCCCCCceEEEEccccc-c-CCc-ccc---cCCCCceEEEE
Q 017033 236 ---SNNRTIEFYKFWYNSRK--MFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKY-I-AGF-CQV---SQDFNAVCTMH 304 (378)
Q Consensus 236 ---st~rti~f~~~W~~~r~--~~p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~-F-~Gf-cq~---~kd~~~~~tvH 304 (378)
...-+.++...-..... .....+||++||.++.+ . .. .+..||..+ + .|. +.. -+....|.++|
T Consensus 169 ~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~-~---~~-~~~~L~~~wN~~~~~~~~~~~~~~~~~~p~IIH 243 (280)
T cd06431 169 KLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQ-N---PF-LVYQLPCAWNVQLSDHTRSEQCYRDVSDLKVIH 243 (280)
T ss_pred HHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcC-C---cc-eeEECCCccccccCccchHhHhhcCcCCCEEEE
Confidence 33323332211111101 12357999999999943 1 01 134566542 1 121 111 01235689999
Q ss_pred ecccCC--hhh-HHHHHHHHHHHHHhhccCC
Q 017033 305 ANCCFG--LEA-KITDLRLALEDWRNFMELP 332 (378)
Q Consensus 305 aNc~~G--~~~-K~~~Lr~vl~dWk~y~~~~ 332 (378)
-+...- ..+ +.+.+|+ .|++|...+
T Consensus 244 f~g~~KPW~~~~~~~~~~~---~~~~~~~~~ 271 (280)
T cd06431 244 WNSPKKLRVKNKHVEFFRN---LYLTFLEYD 271 (280)
T ss_pred eCCCCCCCCcCCCChHHHH---HHHHHHhcC
Confidence 775311 123 3477887 567776544
No 13
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=94.59 E-value=0.16 Score=48.76 Aligned_cols=125 Identities=18% Similarity=0.140 Sum_probs=68.4
Q ss_pred HHHHHHHHcCC-cEEEeeccEEeccCcccccCC---CCcEEEeccCCC-----CCC---------C-CCCCCCCceEEEE
Q 017033 174 RLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDP---DADFQIACDRFS-----GNS---------F-NLRNEPNGGFNYV 234 (378)
Q Consensus 174 ~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~---~aDi~issD~~~-----g~~---------~-d~~~~~NtGf~yv 234 (378)
.++..+|...+ .||+.|+|+|...|=-+.+.- ++=+.+..|+-. +.. . ......|+|++++
T Consensus 86 L~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~~~~~l~~~~YfNSGVmli 165 (248)
T cd06432 86 LFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGYWKSHLRGRPYHISALYVV 165 (248)
T ss_pred HHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhhhhhhcCCCCccceeeEEE
Confidence 44444887766 699999999998765454432 221122223211 000 0 1123689999997
Q ss_pred -----eeCHHHHHHHHHHHHHHhcCC---CCCchHHHHHHHcCCCCCCCceEEEEccccc--cCCcccccCCCCceEEEE
Q 017033 235 -----KSNNRTIEFYKFWYNSRKMFP---GLHDQDVLNEIKFDPYIQKIQVKIRFLDTKY--IAGFCQVSQDFNAVCTMH 304 (378)
Q Consensus 235 -----Rst~rti~f~~~W~~~r~~~p---~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~--F~Gfcq~~kd~~~~~tvH 304 (378)
|...-+-++.+. ++.....+ ..+||+++|.++.. .++..||..+ +-++|-..+ ..++-|+|
T Consensus 166 NL~~wR~~~i~~~~~~~-~~~l~~~~~~l~~~DQDiLN~v~~~-------~~i~~Lp~~w~~~~~~~~~~~-~~~~~~~~ 236 (248)
T cd06432 166 DLKRFRRIAAGDRLRGQ-YQQLSQDPNSLANLDQDLPNNMQHQ-------VPIFSLPQEWLWCETWCSDES-KKKAKTID 236 (248)
T ss_pred eHHHHHHHhHHHHHHHH-HHHHhcCCCccccCCchhhHHHhcc-------CCeEECChHHHHHHHHhcccc-cCccceee
Confidence 554444333322 22122222 35799999999932 2378888874 225555433 34455666
Q ss_pred ecc
Q 017033 305 ANC 307 (378)
Q Consensus 305 aNc 307 (378)
--|
T Consensus 237 ~~~ 239 (248)
T cd06432 237 LCN 239 (248)
T ss_pred ccc
Confidence 544
No 14
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=94.08 E-value=0.76 Score=46.11 Aligned_cols=107 Identities=21% Similarity=0.242 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCCC--c-EEEe-ccCCC----------CCCCCCCCCCCceEEE
Q 017033 169 MWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPDA--D-FQIA-CDRFS----------GNSFNLRNEPNGGFNY 233 (378)
Q Consensus 169 ~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~a--D-i~is-sD~~~----------g~~~d~~~~~NtGf~y 233 (378)
+.-|+ ++-++|...+ .||+.|+|||-.+|--+.+.-+- + +... .|... +.+.......|+|+++
T Consensus 107 tY~Rl-~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~~~~~~~~~l~~~~~~~~YFNsGVll 185 (334)
T PRK15171 107 TYFRF-IIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAEWWSKRAQSLQTPGLASGYFNSGFLL 185 (334)
T ss_pred HHHHH-HHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchhHHHHHHHhcCCccccccceecceEE
Confidence 33353 3445554345 59999999999998877775432 2 2222 23211 1111112468999999
Q ss_pred Ee-----eCHHHHHHHHHHHHHHh--cCCCCCchHHHHHHHcCCCCCCCceEEEEcccc
Q 017033 234 VK-----SNNRTIEFYKFWYNSRK--MFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTK 285 (378)
Q Consensus 234 vR-----st~rti~f~~~W~~~r~--~~p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~ 285 (378)
+- -..-+.++++. ..... ..-...||++||.++.. ++..||..
T Consensus 186 iNl~~wRe~~i~~k~~~~-l~~~~~~~~~~~~DQDiLN~~~~~--------~~~~L~~~ 235 (334)
T PRK15171 186 INIPAWAQENISAKAIEM-LADPEIVSRITHLDQDVLNILLAG--------KVKFIDAK 235 (334)
T ss_pred EcHHHHHHhhHHHHHHHH-HhccccccceeecChhHHHHHHcC--------CeEECCHh
Confidence 83 33333444432 11110 01135799999999943 46777764
No 15
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=93.80 E-value=0.37 Score=45.56 Aligned_cols=95 Identities=26% Similarity=0.303 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEeeccEEeccCccccc----CCCCcEEEeccCCCCCCCCCCCCCCceEEEEeeCHHHH
Q 017033 166 LEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRF----DPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTI 241 (378)
Q Consensus 166 l~m~w~K~~~l~~vL~lGy~vLftDvDVVWlRnPfp~~----~~~aDi~issD~~~g~~~d~~~~~NtGf~yvRst~rti 241 (378)
...+.+|--++..+|..==-|||.|+||.- -||-..+ .+..|+.+- |.+. ...+.+|-|.+|.|+.++
T Consensus 25 kd~fFrRHCvva~~L~~~~~vlflDaDigV-vNp~~~iEefid~~~Di~fy-dR~~------n~Ei~agsYlvkNT~~~~ 96 (222)
T PF03314_consen 25 KDKFFRRHCVVAKILPEYDWVLFLDADIGV-VNPNRRIEEFIDEGYDIIFY-DRFF------NWEIAAGSYLVKNTEYSR 96 (222)
T ss_pred hhHHHHHHHHHHHHhccCCEEEEEcCCcee-ecCcccHHHhcCCCCcEEEE-eccc------chhhhhccceeeCCHHHH
Confidence 456788999999999865569999999965 4786554 567898876 3332 124789999999999999
Q ss_pred HHHHHHHHHHhcCCC---CCchHHHHHHHc
Q 017033 242 EFYKFWYNSRKMFPG---LHDQDVLNEIKF 268 (378)
Q Consensus 242 ~f~~~W~~~r~~~p~---~~DQ~vfN~il~ 268 (378)
+|++.|...-.+-|. ..|-.++...+.
T Consensus 97 ~fl~~~a~~E~~lP~sfhGtDNGAlH~~L~ 126 (222)
T PF03314_consen 97 DFLKEWADYEFKLPNSFHGTDNGALHIFLA 126 (222)
T ss_pred HHHHHHhhhCccCCCccccCccHHHHHHHH
Confidence 999999876545453 357777766653
No 16
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=93.24 E-value=0.97 Score=45.46 Aligned_cols=172 Identities=19% Similarity=0.163 Sum_probs=94.4
Q ss_pred EEEEecccccCCCchHHHHHHHhhhccCCccccCcEEEEEcChHHHHHhHhcC--CcEEEecCCCCCCCcchhcc--ccH
Q 017033 88 IITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTH--PHCYALNTSGLDFSGKEAYF--MTS 163 (378)
Q Consensus 88 IvT~~N~a~a~p~s~lDlfLes~r~g~~t~~l~~~llVvAlD~~a~~~c~~~g--~~cy~~~~~~~d~~~~~~~f--~s~ 163 (378)
|+-.++.+|+.|.+ .-+-|.........+-=|.++.-.+++-.+++++.- ..++..-. -.|.+. -..+ -++
T Consensus 5 Iv~a~D~nY~~~~g---vsI~SiL~~n~~~~~~fhil~~~i~~e~~~~l~~~~~~f~~~i~~~-~id~~~-~~~~~~~~~ 79 (325)
T COG1442 5 IAFAFDKNYLIPAG---VSIYSLLEHNRKIFYKFHILVDGLNEEDKKKLNETAEPFKSFIVLE-VIDIEP-FLDYPPFTK 79 (325)
T ss_pred EEEEcccccchhHH---HHHHHHHHhCccccEEEEEEecCCCHHHHHHHHHHHHhhccceeeE-EEechh-hhccccccc
Confidence 66677889986532 123344321111133446677778888888887752 11211100 001111 1122 356
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEeeccEEeccCcccccCC---CCcEEEeccCCCC----------CCCCCCCCCCce
Q 017033 164 SYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDP---DADFQIACDRFSG----------NSFNLRNEPNGG 230 (378)
Q Consensus 164 ~yl~m~w~K~~~l~~vL~lGy~vLftDvDVVWlRnPfp~~~~---~aDi~issD~~~g----------~~~d~~~~~NtG 230 (378)
.|..|+..|. ++-+++...=.+|+.|+|||..++=-..|.- +.=+.+..|.+.. .....+...|+|
T Consensus 80 ~~s~~v~~R~-fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~~~~~~~~~~~~~~~~yFNaG 158 (325)
T COG1442 80 RFSKMVLVRY-FLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMKEGALRLEKGDLEGSYFNAG 158 (325)
T ss_pred chHHHHHHHH-HHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhhhhhhhHhhhcccccccCccc
Confidence 6777887775 4556666667799999999999986555432 2223334444321 122345569999
Q ss_pred EEEE-----e---eCHHHHHHHHHHHHHHhcCCCCCchHHHHHHHcC
Q 017033 231 FNYV-----K---SNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFD 269 (378)
Q Consensus 231 f~yv-----R---st~rti~f~~~W~~~r~~~p~~~DQ~vfN~il~~ 269 (378)
++++ | .+++.++++..+- ..-...||+++|.++.+
T Consensus 159 ~llinl~~W~~~~i~~k~i~~~~~~~----~~~~~~DQdiLN~i~~~ 201 (325)
T COG1442 159 VLLINLKLWREENIFEKLIELLKDKE----NDLLYPDQDILNMIFED 201 (325)
T ss_pred eeeehHHHHHHhhhHHHHHHHHhccc----cccCCccccHHHHHHHh
Confidence 9997 2 2233333332211 12235789999999954
No 17
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=92.02 E-value=0.68 Score=44.88 Aligned_cols=103 Identities=20% Similarity=0.236 Sum_probs=61.1
Q ss_pred cEEEeeccEEeccCcccccCCC---CcEEEeccCCCCCCCCCCCCCCceEEEE-----eeCHHHHHHHHHHHHHHh----
Q 017033 185 NFVFTDADIVWLQNPFQRFDPD---ADFQIACDRFSGNSFNLRNEPNGGFNYV-----KSNNRTIEFYKFWYNSRK---- 252 (378)
Q Consensus 185 ~vLftDvDVVWlRnPfp~~~~~---aDi~issD~~~g~~~d~~~~~NtGf~yv-----Rst~rti~f~~~W~~~r~---- 252 (378)
.+|+.|+|+|-.+|=-+.+..+ .-+....| ..|+|++++ |..+-+.++++ |+....
T Consensus 116 kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d-----------yfNsGV~linl~~wr~~~i~~~~~~-~~~~~~~~~~ 183 (257)
T cd06429 116 KVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET-----------SWNPGVNVVNLTEWRRQNVTETYEK-WMELNQEEEV 183 (257)
T ss_pred eEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh-----------hcccceEEEeHHHHHhccHHHHHHH-HHHHhhhccc
Confidence 6999999999999877776443 11222222 579999997 44444444443 333221
Q ss_pred cCCCCCchHHHHHHHcCCCCCCCceEEEEccccc--cC-Ccccc--cCCCCceEEEEecc
Q 017033 253 MFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKY--IA-GFCQV--SQDFNAVCTMHANC 307 (378)
Q Consensus 253 ~~p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~--F~-Gfcq~--~kd~~~~~tvHaNc 307 (378)
......||+++|.++.. ++..||..+ ++ |+-.. ......+.++|-+-
T Consensus 184 ~~~~~~dqd~ln~~~~~--------~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G 235 (257)
T cd06429 184 TLWKLITLPPGLIVFYG--------LTSPLDPSWHVRGLGYNYGIRPQDIKAAAVLHFNG 235 (257)
T ss_pred chhhcCCccHHHHHccC--------eeEECChHHcccCCcccccccccccCCcEEEEECC
Confidence 22455789999998832 356666541 22 22211 12345678999774
No 18
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=85.38 E-value=3.9 Score=44.43 Aligned_cols=159 Identities=18% Similarity=0.189 Sum_probs=90.0
Q ss_pred hhccccHHHHHH-HHHHHHHHHHHHHcCCcEEEeeccEEeccCcccccCCC---CcEEEeccCCC-----------CCCC
Q 017033 157 EAYFMTSSYLEM-MWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPD---ADFQIACDRFS-----------GNSF 221 (378)
Q Consensus 157 ~~~f~s~~yl~m-~w~K~~~l~~vL~lGy~vLftDvDVVWlRnPfp~~~~~---aDi~issD~~~-----------g~~~ 221 (378)
...|-.+.|+.+ +..|+. +-++|..=-.||+.|+|||-.+|--+.+.-+ .-+.+..|+.. .++.
T Consensus 449 ~~k~r~p~ylS~lnY~Rf~-LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f~r~~~ylnfs~P~ 527 (657)
T PLN02910 449 NLKYRNPKYLSMLNHLRFY-LPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESFHRFDKYLNFSNPK 527 (657)
T ss_pred ccccCCcchhhHHHHHHHH-HHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhhhhhhhhhccCChh
Confidence 345556677655 445654 4445552226999999999999987766432 22222333321 1111
Q ss_pred ------CCCCCCCceEEEE-----eeCHHHHHHHHHHHHHHhcCCCCCchHHHHH---HHcCCCCCCCceEEEEccccc-
Q 017033 222 ------NLRNEPNGGFNYV-----KSNNRTIEFYKFWYNSRKMFPGLHDQDVLNE---IKFDPYIQKIQVKIRFLDTKY- 286 (378)
Q Consensus 222 ------d~~~~~NtGf~yv-----Rst~rti~f~~~W~~~r~~~p~~~DQ~vfN~---il~~~~~~~~gl~v~~Ld~~~- 286 (378)
.-.-..|+|++++ |-.+-|. .+..|... ......+||+++|- ++ ++ ++..||...
T Consensus 528 i~~yFNs~aCyfNsGVmVIDL~~WRe~nITe-~ye~w~el-n~~~~L~dqgsLPpgLLvF-~g-------~i~pLD~rWN 597 (657)
T PLN02910 528 ISENFDPNACGWAFGMNMFDLKEWRKRNITG-IYHYWQDL-NEDRTLWKLGSLPPGLITF-YN-------LTYPLDRSWH 597 (657)
T ss_pred hhhccCCCCceeecccEEEeHHHHHHhhHHH-HHHHHHHh-cccccccccCCCChHHHHH-hC-------ceeecCchhe
Confidence 0112356799997 5555555 88888874 34457899999994 33 22 245666552
Q ss_pred -cC-Ccc--cccCCCCceEEEEecccCCh---hhHHHHHHHHHHHHHhhcc
Q 017033 287 -IA-GFC--QVSQDFNAVCTMHANCCFGL---EAKITDLRLALEDWRNFME 330 (378)
Q Consensus 287 -F~-Gfc--q~~kd~~~~~tvHaNc~~G~---~~K~~~Lr~vl~dWk~y~~ 330 (378)
.| |+- ........+.++|-|.. ++ +..++..|. .|.+|..
T Consensus 598 v~GLGyd~~v~~~~i~~AAVLHynG~-~KPWl~l~i~~Yr~---~W~kYl~ 644 (657)
T PLN02910 598 VLGLGYDPALNQTEIENAAVVHYNGN-YKPWLDLAIAKYKP---YWSRYVQ 644 (657)
T ss_pred ecCCCCCcccccccccCcEEEEeCCC-CCcccccCcccchH---HHHHHcc
Confidence 23 321 11245667899997743 22 233344555 7888865
No 19
>PLN02829 Probable galacturonosyltransferase
Probab=84.53 E-value=4.3 Score=44.09 Aligned_cols=158 Identities=18% Similarity=0.197 Sum_probs=88.3
Q ss_pred hccccHHHHHH-HHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCC---CcEEEeccCCC-----------CCC-
Q 017033 158 AYFMTSSYLEM-MWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPD---ADFQIACDRFS-----------GNS- 220 (378)
Q Consensus 158 ~~f~s~~yl~m-~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~---aDi~issD~~~-----------g~~- 220 (378)
..|..+.|..+ +..|+. +-+++. .+ .||+.|.|||-.+|--+.+.-+ .-+....|+.. .++
T Consensus 432 ~k~r~p~ylS~lnY~Rfy-LPeLLP-~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~ 509 (639)
T PLN02829 432 LKYRNPKYLSILNHLRFY-LPEIFP-KLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPL 509 (639)
T ss_pred cccCCcchhhHHHHHHHH-HHHHhc-ccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchH
Confidence 34555666443 444544 444555 34 6999999999999887776432 21222333311 011
Q ss_pred -----CCCCCCCCceEEEE-----eeCHHHHHHHHHHHHHHhcCCCCCchHHHHHHH--cCCCCCCCceEEEEccccc--
Q 017033 221 -----FNLRNEPNGGFNYV-----KSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIK--FDPYIQKIQVKIRFLDTKY-- 286 (378)
Q Consensus 221 -----~d~~~~~NtGf~yv-----Rst~rti~f~~~W~~~r~~~p~~~DQ~vfN~il--~~~~~~~~gl~v~~Ld~~~-- 286 (378)
.......|+|++++ |-.+-|..+. .|+.. ......|||+++|-++ .++ +++.||...
T Consensus 510 i~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~-~wm~~-n~~r~L~dlgaLPp~Ll~F~g-------~i~~LD~rWNv 580 (639)
T PLN02829 510 ISKNFDPHACGWAYGMNVFDLDEWKRQNITEVYH-SWQKL-NHDRQLWKLGTLPPGLITFWK-------RTYPLDRSWHV 580 (639)
T ss_pred hhhccCCcccceecceEEEeHHHHHHhChHHHHH-HHHHH-ccCCccccccCCChHHHHhcC-------ceEecChhhee
Confidence 01122478999997 6566665555 77753 2334679999999764 121 256666652
Q ss_pred cC-Cccc--ccCCCCceEEEEecccCChh---hHHHHHHHHHHHHHhhcc
Q 017033 287 IA-GFCQ--VSQDFNAVCTMHANCCFGLE---AKITDLRLALEDWRNFME 330 (378)
Q Consensus 287 F~-Gfcq--~~kd~~~~~tvHaNc~~G~~---~K~~~Lr~vl~dWk~y~~ 330 (378)
+| |+-. ..++...+.++|-|.. ++. ..++.+|. .|.+|..
T Consensus 581 ~GLGy~~~v~~~~i~~aaIIHynG~-~KPWle~~i~~yr~---lW~kYl~ 626 (639)
T PLN02829 581 LGLGYNPNVNQRDIERAAVIHYNGN-MKPWLEIGIPKYRN---YWSKYVD 626 (639)
T ss_pred cCCCCCcccchhcccCCeEEEECCC-CCccccCCcccchH---HHHHHHh
Confidence 23 3311 1245667789997742 222 22344555 6888855
No 20
>PLN02867 Probable galacturonosyltransferase
Probab=82.43 E-value=4.3 Score=43.37 Aligned_cols=159 Identities=17% Similarity=0.228 Sum_probs=84.6
Q ss_pred ccccHHHHHH-HHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCC---CcEEEeccCC--------------C--
Q 017033 159 YFMTSSYLEM-MWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPD---ADFQIACDRF--------------S-- 217 (378)
Q Consensus 159 ~f~s~~yl~m-~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~---aDi~issD~~--------------~-- 217 (378)
.+.++.|+.+ +..|+.+- ++|. -+ .||+.|.|||-.+|--+.+.-| .=+..-.|.+ .
T Consensus 321 ~~~~pkylS~lnYlRflIP-eLLP-~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNf 398 (535)
T PLN02867 321 EALSPSCLSLLNHLRIYIP-ELFP-DLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNF 398 (535)
T ss_pred hhcChhhhhHHHHHHHHHH-HHhh-ccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccc
Confidence 3466777765 45665544 4444 23 6999999999999877776432 1111111211 0
Q ss_pred CCCC------CCCCCCCceEEEE-----eeCHHHHHHHHHHHHHH-hcCCCCCchHHHHHHH--cCCCCCCCceEEEEcc
Q 017033 218 GNSF------NLRNEPNGGFNYV-----KSNNRTIEFYKFWYNSR-KMFPGLHDQDVLNEIK--FDPYIQKIQVKIRFLD 283 (378)
Q Consensus 218 g~~~------d~~~~~NtGf~yv-----Rst~rti~f~~~W~~~r-~~~p~~~DQ~vfN~il--~~~~~~~~gl~v~~Ld 283 (378)
++|. ......|+|++++ |-.+-|-++ ..|+..- ......+||+++|..+ -+ =++..||
T Consensus 399 snp~i~~~~~p~~cYFNSGVmLINL~~WRe~nITek~-~~~Le~n~~~~~~l~dqd~LN~~LlvF~-------g~v~~LD 470 (535)
T PLN02867 399 SHPLISSNLDQERCAWLYGMNVFDLKAWRRTNITEAY-HKWLKLSLNSGLQLWQPGALPPALLAFK-------GHVHPID 470 (535)
T ss_pred cchhhhccCCCCCcceecceeeeeHHHHHHhcHHHHH-HHHHHhchhcccccccccccchHHHHhc-------CcEEECC
Confidence 0110 0112478999997 444444433 3444422 1123578999999732 12 1356776
Q ss_pred ccc--cC-Ccccc---cCCCCceEEEEecccC--ChhhHHHHHHHHHHHHHhhcc
Q 017033 284 TKY--IA-GFCQV---SQDFNAVCTMHANCCF--GLEAKITDLRLALEDWRNFME 330 (378)
Q Consensus 284 ~~~--F~-Gfcq~---~kd~~~~~tvHaNc~~--G~~~K~~~Lr~vl~dWk~y~~ 330 (378)
..+ +| |+... .+....+.++|-|-.. =++.-++++|+ .|.+|..
T Consensus 471 ~rWNv~gLgy~~~~~~~~~i~~paIIHYnG~~KPW~e~~~~~yR~---~W~kyl~ 522 (535)
T PLN02867 471 PSWHVAGLGSRPPEVPREILESAAVLHFSGPAKPWLEIGFPEVRS---LWYRHVN 522 (535)
T ss_pred hhhcccCCCcccccchhhhcCCcEEEEECCCCCcccccCCCchhH---HHHHhcC
Confidence 642 23 33211 1224678999987421 01223345666 7888843
No 21
>PLN02718 Probable galacturonosyltransferase
Probab=80.88 E-value=8.4 Score=41.81 Aligned_cols=148 Identities=15% Similarity=0.180 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHcCCcEEEeeccEEeccCcccccCCC---CcEEEeccCCCC--------------CCC-----C-CCC
Q 017033 169 MWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPD---ADFQIACDRFSG--------------NSF-----N-LRN 225 (378)
Q Consensus 169 ~w~K~~~l~~vL~lGy~vLftDvDVVWlRnPfp~~~~~---aDi~issD~~~g--------------~~~-----d-~~~ 225 (378)
+..|+.+-. ++..=-.||+.|+|||-.+|--+.+.-+ .-+.+..|+..+ ++. + ...
T Consensus 405 ~y~Rl~ipe-llp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~lnfs~p~i~~~fn~~~C 483 (603)
T PLN02718 405 NHARFYLPD-IFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTFINFSDPWVAKKFDPKAC 483 (603)
T ss_pred HHHHHHHHH-HhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhhhhccchhhhcccCCCcc
Confidence 444654433 4442127999999999999987776432 212223343221 000 0 012
Q ss_pred CCCceEEEE-----eeCHHHHHHHHHHHHHHhcCCCCCchHHHH---HHHcCCCCCCCceEEEEccccc--cC-Cccc--
Q 017033 226 EPNGGFNYV-----KSNNRTIEFYKFWYNSRKMFPGLHDQDVLN---EIKFDPYIQKIQVKIRFLDTKY--IA-GFCQ-- 292 (378)
Q Consensus 226 ~~NtGf~yv-----Rst~rti~f~~~W~~~r~~~p~~~DQ~vfN---~il~~~~~~~~gl~v~~Ld~~~--F~-Gfcq-- 292 (378)
..|+|++.+ |-.+-|.. +..|+... .....+||+++| .++.. ++..||... .+ |+..
T Consensus 484 yfNsGVlLIDLk~WReenITe~-~~~~l~~n-~~~~l~dqdaLpp~LlvF~g--------ri~~LD~rWNv~gLG~~~~i 553 (603)
T PLN02718 484 TWAFGMNLFDLEEWRRQKLTSV-YHKYLQLG-VKRPLWKAGSLPIGWLTFYN--------QTVALDKRWHVLGLGHESGV 553 (603)
T ss_pred ccccceEEEeHHHHHhcChHHH-HHHHHHhc-cCccccCcccccHHHHHhcC--------ceeecChHHhccCccccccc
Confidence 367999986 55555554 44566532 223578999987 45422 256676652 33 3321
Q ss_pred ccCCCCceEEEEecccC--ChhhHHHHHHHHHHHHHhhcc
Q 017033 293 VSQDFNAVCTMHANCCF--GLEAKITDLRLALEDWRNFME 330 (378)
Q Consensus 293 ~~kd~~~~~tvHaNc~~--G~~~K~~~Lr~vl~dWk~y~~ 330 (378)
...+...+.++|-|... =++.-+.+.|. -|++|..
T Consensus 554 ~~~~i~~aaIIHYnG~~KPWle~~i~~yr~---~W~k~v~ 590 (603)
T PLN02718 554 GASDIEQAAVIHYDGVMKPWLDIGIGKYKR---YWNIHVP 590 (603)
T ss_pred cccccCCCEEEEECCCCCccccCChhhHHH---HHHhhcC
Confidence 12356678999977421 01333456666 6998865
No 22
>PLN02659 Probable galacturonosyltransferase
Probab=78.44 E-value=9.5 Score=40.81 Aligned_cols=157 Identities=18% Similarity=0.263 Sum_probs=83.8
Q ss_pred cccHHHHHH-HHHHHHHHHHHHH-cCCcEEEeeccEEeccCcccccCCC--CcEE-EeccCCC----------------C
Q 017033 160 FMTSSYLEM-MWIRIRLLSDVLA-MGYNFVFTDADIVWLQNPFQRFDPD--ADFQ-IACDRFS----------------G 218 (378)
Q Consensus 160 f~s~~yl~m-~w~K~~~l~~vL~-lGy~vLftDvDVVWlRnPfp~~~~~--aDi~-issD~~~----------------g 218 (378)
+..+.|+.| +..|+.+ -++|. ++ .||+.|.|||-.+|=-+.+.-+ -.+. ...|+.. +
T Consensus 321 ~~~p~ylS~~nY~RL~I-PeLLP~Ld-KVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s 398 (534)
T PLN02659 321 ALSPKYNSVMNHIRIHL-PELFPSLN-KVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFS 398 (534)
T ss_pred cCCccceeHHHHHHHHH-HHHhhhcC-eEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhccc
Confidence 466777765 4566554 33444 32 6999999999999866655422 1122 2223210 0
Q ss_pred CCC------CCCCCCCceEEEE-----eeCHHHHHHHHHHHHHHh-cCCCCCchHHHH---HHHcCCCCCCCceEEEEcc
Q 017033 219 NSF------NLRNEPNGGFNYV-----KSNNRTIEFYKFWYNSRK-MFPGLHDQDVLN---EIKFDPYIQKIQVKIRFLD 283 (378)
Q Consensus 219 ~~~------d~~~~~NtGf~yv-----Rst~rti~f~~~W~~~r~-~~p~~~DQ~vfN---~il~~~~~~~~gl~v~~Ld 283 (378)
++. ......|+|++++ |-.+-|-++++ |+.... ..-..+||+++| .++ ++ ++.+||
T Consensus 399 ~p~i~~yFn~~~cYfNsGVlLINLk~WRe~nITek~l~-~l~~n~~~~l~l~DQdaLp~~LivF-~g-------~v~~LD 469 (534)
T PLN02659 399 HPLIAKNFDPNECAWAYGMNIFDLEAWRKTNISSTYHH-WLEENLKSDLSLWQLGTLPPGLIAF-HG-------HVHVID 469 (534)
T ss_pred chhhhhccCccccceecceeEeeHHHHHhcChHHHHHH-HHHhcccccccccccccchHHHHHh-cC-------CEEECC
Confidence 010 0112468899997 55555555554 343221 223468999995 444 22 256776
Q ss_pred cc--ccC-Ccccc--cCCCCceEEEEecccCC--hhhHHHHHHHHHHHHHhhcc
Q 017033 284 TK--YIA-GFCQV--SQDFNAVCTMHANCCFG--LEAKITDLRLALEDWRNFME 330 (378)
Q Consensus 284 ~~--~F~-Gfcq~--~kd~~~~~tvHaNc~~G--~~~K~~~Lr~vl~dWk~y~~ 330 (378)
.. .++ |+... ..+...+.++|-|...- ++.-++..|. .|.+|..
T Consensus 470 ~rWN~~gLg~~~~~~~~~i~~paIIHYnG~~KPW~~~~~~~yr~---~W~kYl~ 520 (534)
T PLN02659 470 PFWHMLGLGYQENTSLADAESAGVVHFNGRAKPWLDIAFPQLRP---LWAKYID 520 (534)
T ss_pred hhheecCCcccccccccccCCcEEEEECCCCCccccccCCcchh---HHHHHhc
Confidence 64 234 33221 23456788999764210 0111234444 6888865
No 23
>PLN02870 Probable galacturonosyltransferase
Probab=71.21 E-value=12 Score=40.10 Aligned_cols=155 Identities=15% Similarity=0.208 Sum_probs=80.8
Q ss_pred cHHHHHH-HHHHHHHHHHHHHcCCcEEEeeccEEeccCcccccCCC--CcEE-EeccCCCC----------------CC-
Q 017033 162 TSSYLEM-MWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPD--ADFQ-IACDRFSG----------------NS- 220 (378)
Q Consensus 162 s~~yl~m-~w~K~~~l~~vL~lGy~vLftDvDVVWlRnPfp~~~~~--aDi~-issD~~~g----------------~~- 220 (378)
++.|+.+ ...|+.+ -++|..=-.||+.|.|||-.+|--+.+.-+ --+. ...|+..+ +|
T Consensus 322 ~p~ylS~lny~Rl~L-PelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs~p~ 400 (533)
T PLN02870 322 SPKYISLLNHLRIYL-PELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPL 400 (533)
T ss_pred CccccCHHHHHHHHH-HHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcccccch
Confidence 4455443 3445543 334442127999999999999887776532 1122 22332111 01
Q ss_pred -----CCCCCCCCceEEEE-----eeCHHHHHHHHHHHHH-HhcCCCCCchHHHH---HHHcCCCCCCCceEEEEcccc-
Q 017033 221 -----FNLRNEPNGGFNYV-----KSNNRTIEFYKFWYNS-RKMFPGLHDQDVLN---EIKFDPYIQKIQVKIRFLDTK- 285 (378)
Q Consensus 221 -----~d~~~~~NtGf~yv-----Rst~rti~f~~~W~~~-r~~~p~~~DQ~vfN---~il~~~~~~~~gl~v~~Ld~~- 285 (378)
+......|+|++++ |-.+-|-++++ |+.. ..+.-..+||+++| .++ ++ ++..||..
T Consensus 401 i~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~-~l~~n~~~~l~l~DQdaLp~~livf-~g-------~v~~LD~rW 471 (533)
T PLN02870 401 IAKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHS-WLKENLKSNLTMWKLGTLPPALIAF-KG-------HVHPIDPSW 471 (533)
T ss_pred hhcccCcccceeeccchhccHHHHHHcChHHHHHH-HHHhhhhcCceecccccccHhHHHh-cC-------ceEECChHH
Confidence 00012357999986 55555555544 4432 22223579999995 444 21 25777765
Q ss_pred -ccC-Cccc--ccCCCCceEEEEecccCChh---hHHHHHHHHHHHHHhhcc
Q 017033 286 -YIA-GFCQ--VSQDFNAVCTMHANCCFGLE---AKITDLRLALEDWRNFME 330 (378)
Q Consensus 286 -~F~-Gfcq--~~kd~~~~~tvHaNc~~G~~---~K~~~Lr~vl~dWk~y~~ 330 (378)
.++ |+-. ..+....+.++|-|.. .+. .-++..|. .|++|..
T Consensus 472 N~~gLgy~~~~~~~~i~~aaIIHY~G~-~KPW~~~~~~~yr~---~W~kYl~ 519 (533)
T PLN02870 472 HMLGLGYQSKTNIESVKKAAVIHYNGQ-SKPWLEIGFEHLRP---FWTKYVN 519 (533)
T ss_pred hcCCCCCcccccccccCCcEEEEECCC-CCCccccCccchhH---HHHHHHc
Confidence 234 3321 1234567899997642 111 11223344 6888865
No 24
>PLN02523 galacturonosyltransferase
Probab=67.88 E-value=8.5 Score=41.33 Aligned_cols=156 Identities=17% Similarity=0.328 Sum_probs=84.0
Q ss_pred cccHHHHHH-HHHHHHHHHHHHHcCCcEEEeeccEEeccCcccccCCCC-c--EEEeccCCC-----------CCCCCCC
Q 017033 160 FMTSSYLEM-MWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPDA-D--FQIACDRFS-----------GNSFNLR 224 (378)
Q Consensus 160 f~s~~yl~m-~w~K~~~l~~vL~lGy~vLftDvDVVWlRnPfp~~~~~a-D--i~issD~~~-----------g~~~d~~ 224 (378)
|-.+.|+.+ ...|+. +-+++..==.||+.|.|||-.+|--+.+.-+- + +....|++. +++. ..
T Consensus 354 ~~~p~ylS~~ny~Rf~-IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL~gkv~aAVeDc~~~~~r~~~~ln~s~p~-i~ 431 (559)
T PLN02523 354 FRNPKYLSMLNHLRFY-LPEMYPKLHRILFLDDDVVVQKDLTGLWKIDMDGKVNGAVETCFGSFHRYAQYLNFSHPL-IK 431 (559)
T ss_pred ccCcchhhHHHHHHHH-HHHHhcccCeEEEEeCCEEecCCHHHHHhCcCCCceEEEehhhhhHHHHHHHhhcccchh-hh
Confidence 333455433 334543 33455532269999999999999877765321 1 222334431 1110 11
Q ss_pred CCCCc-------eEEEE-----eeCHHHHHHHHHHHHHHhcCCCCCchHHHH---HHHcCCCCCCCceEEEEccccc-c-
Q 017033 225 NEPNG-------GFNYV-----KSNNRTIEFYKFWYNSRKMFPGLHDQDVLN---EIKFDPYIQKIQVKIRFLDTKY-I- 287 (378)
Q Consensus 225 ~~~Nt-------Gf~yv-----Rst~rti~f~~~W~~~r~~~p~~~DQ~vfN---~il~~~~~~~~gl~v~~Ld~~~-F- 287 (378)
..+|+ |++++ |-.+-|-++ ..|.. .......+||+++| .++ ++ ++..||... +
T Consensus 432 ~yFNs~aC~wnsGVmlINL~~WRe~nITek~-~~w~~-ln~~~~l~DqdaLpp~LivF-~g-------ri~~LD~rWNvl 501 (559)
T PLN02523 432 EKFNPKACAWAYGMNIFDLDAWRREKCTEQY-HYWQN-LNENRTLWKLGTLPPGLITF-YS-------TTKPLDKSWHVL 501 (559)
T ss_pred hCcCCCcccccCCcEEEeHHHHHHhchHHHH-HHHHH-hccccccccccccchHHHHh-cC-------ceEecCchhhcc
Confidence 23455 99997 666666665 57765 33345679999997 333 21 256666652 2
Q ss_pred C-Ccc-c-ccCCCCceEEEEecccCC--hhhHHHHHHHHHHHHHhhcc
Q 017033 288 A-GFC-Q-VSQDFNAVCTMHANCCFG--LEAKITDLRLALEDWRNFME 330 (378)
Q Consensus 288 ~-Gfc-q-~~kd~~~~~tvHaNc~~G--~~~K~~~Lr~vl~dWk~y~~ 330 (378)
+ |+- . ..++...+.++|-|-..- ++..+...|+ .|.+|..
T Consensus 502 glGy~~~i~~~~i~~paIIHYnG~~KPWle~~i~~yr~---~W~kYl~ 546 (559)
T PLN02523 502 GLGYNPSISMDEIRNAAVIHFNGNMKPWLDIAMNQFKP---LWTKYVD 546 (559)
T ss_pred CCccCCCccccccCCCEEEEECCCCCccccCCCCcchH---HHHHHHc
Confidence 2 321 1 123456789999774210 1222233444 5888865
No 25
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=65.65 E-value=7.1 Score=39.84 Aligned_cols=179 Identities=15% Similarity=0.200 Sum_probs=104.9
Q ss_pred HHHhHhcCCcEEEecCCCCCCCcchhccccHHHHHHHHHHHHHHHHHHHcCCc---EEEeeccEEeccCccc----ccC-
Q 017033 133 LDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYN---FVFTDADIVWLQNPFQ----RFD- 204 (378)
Q Consensus 133 ~~~c~~~g~~cy~~~~~~~d~~~~~~~f~s~~yl~m~w~K~~~l~~vL~lGy~---vLftDvDVVWlRnPfp----~~~- 204 (378)
-++|+..|..-+...... ...+ .-+...|.|+-+|++.+..=-+ +-+.|.|.+.+ ||-- ++.
T Consensus 132 idYA~rHgy~~~~~~~~~------~~~~---~e~~~~W~KiP~Ir~tM~kyP~AeWIWWlD~DAlim-n~~lsL~~~ilk 201 (364)
T KOG4748|consen 132 IDYARRHGYEFEYKNATL------DKRY---HELPGVWAKLPAIRQTMLKYPDAEWIWWLDQDALIM-NPDLSLQDHILK 201 (364)
T ss_pred HHHHHHhCCeEEEEeccc------cccc---ccccchhHHhHHHHHHHHHCCCCcEEEEecccchhh-CcccchhHHhcC
Confidence 478999997766554322 1111 1134589999999999876443 67788888765 3321 111
Q ss_pred ---------C-CCcEEEeccCCC-C--C-------------CCCCCCCCCceEEEEeeCHHHHHHHHHHHHHHhc--CCC
Q 017033 205 ---------P-DADFQIACDRFS-G--N-------------SFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKM--FPG 256 (378)
Q Consensus 205 ---------~-~aDi~issD~~~-g--~-------------~~d~~~~~NtGf~yvRst~rti~f~~~W~~~r~~--~p~ 256 (378)
+ +.-.+..-..|. + + +.| .+.+|+|=+++|.++-++.+++.|-+-... .-+
T Consensus 202 ~~~L~~~l~~nd~~~~~~~n~~~~~~~~~~~d~~~~~~~ii~qD-~nG~naGSfLirns~~~~~llD~w~dp~l~~~~~~ 280 (364)
T KOG4748|consen 202 PENLVTHLLRNDQKSINPLNIFRLRPRTPSLDDLEDIAFIIPQD-CNGINAGSFLIRNSEWGRLLLDAWNDPLLYELLWG 280 (364)
T ss_pred HHHHHHhhccccccccccCCccccccccccccchhhhceecccC-CCCccccceEEecCccchhHHHhccCHHHHhhccc
Confidence 1 111111000000 0 0 111 245899999999999999999999765444 346
Q ss_pred CCchHHHHHHHcCCCCCCCceEEEEccccccC----CcccccCCCCceEEEEecccCChhhHHHHHHHHHHHHHhhccCC
Q 017033 257 LHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIA----GFCQVSQDFNAVCTMHANCCFGLEAKITDLRLALEDWRNFMELP 332 (378)
Q Consensus 257 ~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~F~----Gfcq~~kd~~~~~tvHaNc~~G~~~K~~~Lr~vl~dWk~y~~~~ 332 (378)
.+||+++-.++... ..+.=.+.+|+..++- |-|..+.+.. ...+|---|.+. ..+++.|.+|..+-
T Consensus 281 ~~Eq~al~~~~e~h--~~l~~~vgilp~r~ins~~~~~~~~g~~eg-dlvvhFaGC~~~-------~~C~~~~~~y~~~~ 350 (364)
T KOG4748|consen 281 QKEQDALGHFLENH--PQLHSHVGILPLRYINSYPNGAPGYGYEEG-DLVVHFAGCYVR-------NRCLEEMEKYFNLI 350 (364)
T ss_pred hHHHHHHHHHHhhc--hhhhhheeeccHHHHhcCCCCCCCCccccC-CeEEEecccccH-------hHHHHHHHHHHHHH
Confidence 78999999888321 1223347788887764 4444333333 466787777332 23555666665543
No 26
>PLN02742 Probable galacturonosyltransferase
Probab=62.22 E-value=46 Score=35.76 Aligned_cols=158 Identities=19% Similarity=0.275 Sum_probs=86.0
Q ss_pred cccHHHHHH-HHHHHHHHHHHHHcCCcEEEeeccEEeccCcccccCCC---CcEEEeccCC------C-----CCC----
Q 017033 160 FMTSSYLEM-MWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPD---ADFQIACDRF------S-----GNS---- 220 (378)
Q Consensus 160 f~s~~yl~m-~w~K~~~l~~vL~lGy~vLftDvDVVWlRnPfp~~~~~---aDi~issD~~------~-----g~~---- 220 (378)
+.++.|..+ +..|+.+-. +|..=-.||+.|+|||-.+|--+.+.-+ .=+....|+. . .+|
T Consensus 330 ~r~p~y~s~~~y~R~~lP~-llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~f~ry~~yLnfS~p~i~~ 408 (534)
T PLN02742 330 FRNPKYLSMLNHLRFYIPE-IYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETFHRYHKYLNFSHPLISS 408 (534)
T ss_pred ccCcccccHHHHHHHHHHH-HhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhhhhhhhhhhcccchhhhc
Confidence 333444433 445655443 4442127999999999999987776432 2122333441 1 011
Q ss_pred -CC-CCCCCCceEEEE-----eeCHHHHHHHHHHHHHHhcCCCCCchHHHHHHH--cCCCCCCCceEEEEccccc-c-C-
Q 017033 221 -FN-LRNEPNGGFNYV-----KSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIK--FDPYIQKIQVKIRFLDTKY-I-A- 288 (378)
Q Consensus 221 -~d-~~~~~NtGf~yv-----Rst~rti~f~~~W~~~r~~~p~~~DQ~vfN~il--~~~~~~~~gl~v~~Ld~~~-F-~- 288 (378)
.+ ..-..|+|++.+ |-.+-|. .+..|.+. ......+||+++|-++ -++. +..||... + |
T Consensus 409 ~f~~~aC~fNsGV~ViDL~~WRe~nITe-~~~~w~e~-n~~~~l~d~gaLpp~LLaF~g~-------~~~LD~rWNv~gL 479 (534)
T PLN02742 409 HFDPDACGWAFGMNVFDLVAWRKANVTA-IYHYWQEQ-NVDRTLWKLGTLPPGLLTFYGL-------TEPLDRRWHVLGL 479 (534)
T ss_pred cCCCCccccccCcEEEeHHHHHhhcHHH-HHHHHHHh-ccccccccccccchHHHHHcCc-------ceecChhheeccc
Confidence 01 112468999986 6556666 77788863 3445789999999752 1222 34555542 2 2
Q ss_pred Cccc--ccCCCCceEEEEecccCC--hhhHHHHHHHHHHHHHhhcc
Q 017033 289 GFCQ--VSQDFNAVCTMHANCCFG--LEAKITDLRLALEDWRNFME 330 (378)
Q Consensus 289 Gfcq--~~kd~~~~~tvHaNc~~G--~~~K~~~Lr~vl~dWk~y~~ 330 (378)
|+-. .......+.++|-|...- .+.-+++.+. .|.+|..
T Consensus 480 G~~~~v~~~~i~~aaILHynG~~KPWl~~~i~~yr~---~W~kYl~ 522 (534)
T PLN02742 480 GYDTNIDPRLIESAAVLHFNGNMKPWLKLAIERYKP---LWERYVN 522 (534)
T ss_pred ccccccchhhccCCeEEEECCCCCcccccCCcccch---HHHHHHc
Confidence 3311 123456778899774310 1122234555 6888855
No 27
>PLN02769 Probable galacturonosyltransferase
Probab=56.41 E-value=43 Score=36.70 Aligned_cols=157 Identities=18% Similarity=0.160 Sum_probs=78.9
Q ss_pred ccHHHHHH-HHHHHHHHHHHHHcCCcEEEeeccEEeccCcccccCCC---CcEEEeccCCC--CC-------C-CC-CCC
Q 017033 161 MTSSYLEM-MWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPD---ADFQIACDRFS--GN-------S-FN-LRN 225 (378)
Q Consensus 161 ~s~~yl~m-~w~K~~~l~~vL~lGy~vLftDvDVVWlRnPfp~~~~~---aDi~issD~~~--g~-------~-~d-~~~ 225 (378)
.+..|..+ ...|+. |=++|..=-.||+.|.|||-.+|--+.+.-+ .=+....|+.. +. . .+ -..
T Consensus 430 ~~~eyiS~~nh~Rfy-IPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~rl~~~~~yl~~~~F~~~~C 508 (629)
T PLN02769 430 MRTEYLSVFSHSHFL-LPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVRLGQLKNYLGDTNFDTNSC 508 (629)
T ss_pred cCcccccHHHHHHHH-HHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhhhhhhhhhhcccCCCcccc
Confidence 34455443 344554 4445552127999999999999987776532 11112223211 10 0 00 012
Q ss_pred CCCceEEEE-----eeCHHHHHHHHHHHHHHhc-CCCCCc---hHHHHHHHcCCCCCCCceEEEEccccc-c-C-Cccc-
Q 017033 226 EPNGGFNYV-----KSNNRTIEFYKFWYNSRKM-FPGLHD---QDVLNEIKFDPYIQKIQVKIRFLDTKY-I-A-GFCQ- 292 (378)
Q Consensus 226 ~~NtGf~yv-----Rst~rti~f~~~W~~~r~~-~p~~~D---Q~vfN~il~~~~~~~~gl~v~~Ld~~~-F-~-Gfcq- 292 (378)
..|+|++++ |-.+-|..+++ |...... ....++ |+++|.++.. ++..||..+ + + |+..
T Consensus 509 yFNSGVLLINL~~WRk~nITe~~~~-~~~~~~~~~~~~~~~~~Lp~lnlvF~g--------~v~~LD~rWNv~gLG~~~~ 579 (629)
T PLN02769 509 AWMSGLNVIDLDKWRELDVTETYLK-LLQKFSKDGEESLRAAALPASLLTFQD--------LIYPLDDRWVLSGLGHDYG 579 (629)
T ss_pred ccccCeeEeeHHHHHHhCHHHHHHH-HHHHhhhcccccccccCcCHHHHHhcC--------eEEECCHHHcccccccccc
Confidence 469999997 54444544443 4332212 223344 4455555522 367777653 2 2 3322
Q ss_pred -ccCCCCceEEEEecccCC--hhhHHHHHHHHHHHHHhhcc
Q 017033 293 -VSQDFNAVCTMHANCCFG--LEAKITDLRLALEDWRNFME 330 (378)
Q Consensus 293 -~~kd~~~~~tvHaNc~~G--~~~K~~~Lr~vl~dWk~y~~ 330 (378)
.......+.++|-|-..- ++.-.+..|+ .|.+|..
T Consensus 580 i~~~~i~~paIIHYnG~~KPW~e~~i~~yr~---~W~kYl~ 617 (629)
T PLN02769 580 IDEQAIKKAAVLHYNGNMKPWLELGIPKYKK---YWKRFLN 617 (629)
T ss_pred ccccccCCcEEEEECCCCCCccCCCCChHHH---HHHHHhc
Confidence 123456789999773210 0111234555 6777754
No 28
>PLN02331 phosphoribosylglycinamide formyltransferase
Probab=53.94 E-value=92 Score=29.27 Aligned_cols=44 Identities=16% Similarity=0.131 Sum_probs=30.8
Q ss_pred CchHHHHHHHhhhccCCccc-cCcEEEEEcC--hHHHHHhHhcCCcEEEec
Q 017033 100 NSIFDIFLESFRTGNGTGKL-LDHLVVVALD--SKALDHCLSTHPHCYALN 147 (378)
Q Consensus 100 ~s~lDlfLes~r~g~~t~~l-~~~llVvAlD--~~a~~~c~~~g~~cy~~~ 147 (378)
|+.+..+++.++.| .+ ..-.+|++-. ..+.++|++.|++++...
T Consensus 10 Gsn~~al~~~~~~~----~l~~~i~~visn~~~~~~~~~A~~~gIp~~~~~ 56 (207)
T PLN02331 10 GSNFRAIHDACLDG----RVNGDVVVVVTNKPGCGGAEYARENGIPVLVYP 56 (207)
T ss_pred ChhHHHHHHHHHcC----CCCeEEEEEEEeCCCChHHHHHHHhCCCEEEec
Confidence 56677788888765 23 3445566653 455799999999998765
No 29
>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.
Probab=47.98 E-value=2.2e+02 Score=26.08 Aligned_cols=70 Identities=16% Similarity=0.291 Sum_probs=43.6
Q ss_pred CCChhHHHHHHHHhcCCCeEEEEEecccccCCCchHHHHHHHhhhccCCccccCcEEEEEcChHHHHHhHhcCCc
Q 017033 68 SNDPSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHPH 142 (378)
Q Consensus 68 ~~~~~L~~lL~~aA~~d~tVIvT~~N~a~a~p~s~lDlfLes~r~g~~t~~l~~~llVvAlD~~a~~~c~~~g~~ 142 (378)
...+.|+++|......+-.+.|=.=.... .+..+++.+++-++. ..+.++++|.+.|....+.+++..+.
T Consensus 80 ~~iptL~evl~~~~~~~~~l~iEiK~~~~-~~~~~~~~v~~~l~~----~~~~~~v~v~Sf~~~~l~~~~~~~p~ 149 (220)
T cd08579 80 AKIPSLDEYLALAKGLKQKLLIELKPHGH-DSPDLVEKFVKLYKQ----NLIENQHQVHSLDYRVIEKVKKLDPK 149 (220)
T ss_pred CcCCCHHHHHHHhhccCCeEEEEECCCCC-CCHHHHHHHHHHHHH----cCCCcCeEEEeCCHHHHHHHHHHCCC
Confidence 56789999999876432334443322221 222345555544432 13457899999999999999887543
No 30
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=46.51 E-value=1.5e+02 Score=27.48 Aligned_cols=54 Identities=17% Similarity=0.326 Sum_probs=34.8
Q ss_pred CeEEEEEecccccCCCchHHHHHHHhhhccCCccc-cCcEEEEEc--ChHHHHHhHhcCCcEEEecC
Q 017033 85 NTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKL-LDHLVVVAL--DSKALDHCLSTHPHCYALNT 148 (378)
Q Consensus 85 ~tVIvT~~N~a~a~p~s~lDlfLes~r~g~~t~~l-~~~llVvAl--D~~a~~~c~~~g~~cy~~~~ 148 (378)
|.+|++..| |+++..+++.+..+ ++ ..-.+|++- |..+.++|++.|++|+.++.
T Consensus 3 ki~vl~sg~------gs~~~~ll~~~~~~----~~~~~I~~vvs~~~~~~~~~~a~~~gIp~~~~~~ 59 (200)
T PRK05647 3 RIVVLASGN------GSNLQAIIDACAAG----QLPAEIVAVISDRPDAYGLERAEAAGIPTFVLDH 59 (200)
T ss_pred eEEEEEcCC------ChhHHHHHHHHHcC----CCCcEEEEEEecCccchHHHHHHHcCCCEEEECc
Confidence 456666655 45567788888654 22 233334444 34578899999999988763
No 31
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=42.89 E-value=13 Score=35.99 Aligned_cols=19 Identities=37% Similarity=0.450 Sum_probs=18.0
Q ss_pred cEEEeeccEEeccCccccc
Q 017033 185 NFVFTDADIVWLQNPFQRF 203 (378)
Q Consensus 185 ~vLftDvDVVWlRnPfp~~ 203 (378)
.|||.|+|.|-++||-.+|
T Consensus 93 evllLDaD~vpl~~p~~lF 111 (271)
T PF11051_consen 93 EVLLLDADNVPLVDPEKLF 111 (271)
T ss_pred eEEEEcCCcccccCHHHHh
Confidence 6999999999999999888
No 32
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=40.81 E-value=2.6e+02 Score=25.79 Aligned_cols=53 Identities=17% Similarity=0.315 Sum_probs=32.6
Q ss_pred eEEEEEecccccCCCchHHHHHHHhhhccCCccccCcEEEEEcC---hHHHHHhHhcCCcEEEecC
Q 017033 86 TVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALD---SKALDHCLSTHPHCYALNT 148 (378)
Q Consensus 86 tVIvT~~N~a~a~p~s~lDlfLes~r~g~~t~~l~~~llVvAlD---~~a~~~c~~~g~~cy~~~~ 148 (378)
.+|++..| |+++..+++.+..+ .+.-++.+|..| ..+.+++++.|++++.++.
T Consensus 3 iail~sg~------gs~~~~ll~~~~~~----~l~~~I~~vi~~~~~~~~~~~A~~~gip~~~~~~ 58 (190)
T TIGR00639 3 IVVLISGN------GSNLQAIIDACKEG----KIPASVVLVISNKPDAYGLERAAQAGIPTFVLSL 58 (190)
T ss_pred EEEEEcCC------ChhHHHHHHHHHcC----CCCceEEEEEECCccchHHHHHHHcCCCEEEECc
Confidence 44555544 44567788888654 333334443334 4456889999999987653
No 33
>COG1512 Beta-propeller domains of methanol dehydrogenase type [General function prediction only]
Probab=33.15 E-value=2.4e+02 Score=27.83 Aligned_cols=62 Identities=16% Similarity=0.267 Sum_probs=32.3
Q ss_pred CCCCChhHHHHHHHHhcCC-CeEEEEEecccccCCC-c-hHHHHHHHhhhccCCccccC-cEEEEEcCh
Q 017033 66 KSSNDPSLEKILKRAAMGD-NTVIITTLNQAWAEPN-S-IFDIFLESFRTGNGTGKLLD-HLVVVALDS 130 (378)
Q Consensus 66 ~~~~~~~L~~lL~~aA~~d-~tVIvT~~N~a~a~p~-s-~lDlfLes~r~g~~t~~l~~-~llVvAlD~ 130 (378)
...+...|++.|+.-+.+. .-|+|.++..---++- . -.+ +.+.|+.|+.. .-+ =+||||+|+
T Consensus 44 s~~e~~~Leq~l~~L~~kt~~QiaVv~vpSt~g~~IE~ya~r-lfd~W~lG~k~--~~dGvLLlVa~~d 109 (271)
T COG1512 44 SAAERGALEQQLADLEQKTGAQIAVVTVPSTGGETIEQYATR-LFDKWKLGDKA--QDDGVLLLVAMND 109 (271)
T ss_pred ChhhHHHHHHHHHHHHhccCCeEEEEEecCCCCCCHHHHHHH-HHHhcCCCccc--cCCCEEEEEEcCC
Confidence 3455778999998887653 2333333332211100 0 134 44567776322 222 377888887
No 34
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=31.10 E-value=4.6e+02 Score=24.78 Aligned_cols=54 Identities=19% Similarity=0.291 Sum_probs=34.5
Q ss_pred CeEEEEEecccccCCCchHHHHHHHhhhccCCccccCcEEEEEc---ChHHHHHhHhcCCcEEEecC
Q 017033 85 NTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVAL---DSKALDHCLSTHPHCYALNT 148 (378)
Q Consensus 85 ~tVIvT~~N~a~a~p~s~lDlfLes~r~g~~t~~l~~~llVvAl---D~~a~~~c~~~g~~cy~~~~ 148 (378)
|.+++.+.| ||.|+-.++..+.|. +--.+..|-. |..+.+++++.|++++.++.
T Consensus 2 ki~VlaSG~------GSNlqaiida~~~~~----~~a~i~~Visd~~~A~~lerA~~~gIpt~~~~~ 58 (200)
T COG0299 2 KIAVLASGN------GSNLQAIIDAIKGGK----LDAEIVAVISDKADAYALERAAKAGIPTVVLDR 58 (200)
T ss_pred eEEEEEeCC------cccHHHHHHHHhcCC----CCcEEEEEEeCCCCCHHHHHHHHcCCCEEEecc
Confidence 445666555 566777888776442 2122333333 45778999999999988874
No 35
>PF02484 Rhabdo_NV: Rhabdovirus Non-virion protein; InterPro: IPR003490 Infectious hematopoietic necrosis virus (IHNV) is a member of the family Rhabdoviridae. The non-virion protein (NV) is coded for by one of the six genes of the IHNV genome [], but is absent in vesiculovirus-like rhabdovirus [].
Probab=30.92 E-value=60 Score=26.93 Aligned_cols=22 Identities=32% Similarity=0.596 Sum_probs=17.2
Q ss_pred HHHHHcCCcEEEeeccEEeccC
Q 017033 177 SDVLAMGYNFVFTDADIVWLQN 198 (378)
Q Consensus 177 ~~vL~lGy~vLftDvDVVWlRn 198 (378)
..+--.|+.|||-|.|+||-.+
T Consensus 19 yk~~va~hgflfddg~~vw~e~ 40 (111)
T PF02484_consen 19 YKNEVARHGFLFDDGDIVWSED 40 (111)
T ss_pred HHhhccccceEecCCcEEEecC
Confidence 3344578999999999999653
No 36
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=24.29 E-value=2.6e+02 Score=27.76 Aligned_cols=58 Identities=10% Similarity=0.171 Sum_probs=36.2
Q ss_pred CCCeEEEEEecccccCC---CchHHHHHHHhhhccCCccccCcEEEEEcC--------hHHHHHhHhcCCcEEEec
Q 017033 83 GDNTVIITTLNQAWAEP---NSIFDIFLESFRTGNGTGKLLDHLVVVALD--------SKALDHCLSTHPHCYALN 147 (378)
Q Consensus 83 ~d~tVIvT~~N~a~a~p---~s~lDlfLes~r~g~~t~~l~~~llVvAlD--------~~a~~~c~~~g~~cy~~~ 147 (378)
.|+.+|+|.+|+++.+. +..+.++......| +++-|++.+ ..+.+.+.+.|++|....
T Consensus 117 ~~g~~ILT~~~Sg~lat~~~~tv~~~l~~A~~~g-------~~~~V~v~EsrP~~~G~~~~a~~L~~~gI~vtlI~ 185 (303)
T TIGR00524 117 KDGDTVLTHCNAGALATSDYGTALGVIRSAWEDG-------KRIRVIACETRPRNQGSRLTAWELMQDGIDVTLIT 185 (303)
T ss_pred cCCCEEEEecCCccccccCcchHHHHHHHHHHcC-------CceEEEECCCCCccchHHHHHHHHHHCCCCEEEEC
Confidence 37889999999966544 33455444444332 234444444 235677778899998875
No 37
>PRK13010 purU formyltetrahydrofolate deformylase; Reviewed
Probab=22.07 E-value=7.7e+02 Score=24.32 Aligned_cols=45 Identities=13% Similarity=0.195 Sum_probs=33.5
Q ss_pred CchHHHHHHHhhhccCCccc-cCcEEEEEcChHHHHHhHhcCCcEEEecC
Q 017033 100 NSIFDIFLESFRTGNGTGKL-LDHLVVVALDSKALDHCLSTHPHCYALNT 148 (378)
Q Consensus 100 ~s~lDlfLes~r~g~~t~~l-~~~llVvAlD~~a~~~c~~~g~~cy~~~~ 148 (378)
|+-|.-.++.++.| .+ .+=.+|++--+++.+++++.|+||+.+..
T Consensus 104 g~nl~al~~~~~~~----~l~~~i~~visn~~~~~~~A~~~gIp~~~~~~ 149 (289)
T PRK13010 104 DHCLNDLLYRWRMG----ELDMDIVGIISNHPDLQPLAVQHDIPFHHLPV 149 (289)
T ss_pred CccHHHHHHHHHCC----CCCcEEEEEEECChhHHHHHHHcCCCEEEeCC
Confidence 55677788888776 33 45556666667899999999999998764
No 38
>PRK06975 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed
Probab=20.25 E-value=7.8e+02 Score=27.19 Aligned_cols=62 Identities=16% Similarity=0.083 Sum_probs=44.0
Q ss_pred hhHHHHHHHHhcCCCeEEEEEecccccCCCchHHHHHHHhhhccCCccccCcEEEEEcChHHHHHhHhcCCcEEEe
Q 017033 71 PSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHPHCYAL 146 (378)
Q Consensus 71 ~~L~~lL~~aA~~d~tVIvT~~N~a~a~p~s~lDlfLes~r~g~~t~~l~~~llVvAlD~~a~~~c~~~g~~cy~~ 146 (378)
..|...|.... +-..||+|+.|.- +.|++.+... ...++-|+|.-++|.+.+++.|+.+...
T Consensus 44 ~~l~~~l~~L~-~yd~iIFTS~nAV--------~~~~~~l~~~-----~~~~~~i~AVG~~Ta~aL~~~Gi~~~~~ 105 (656)
T PRK06975 44 APLRAALARLS-DYALVVFVSPNAV--------DRALARLDAI-----WPHALPVAVVGPGSVAALARHGIAAPAH 105 (656)
T ss_pred HHHHHHHHhCC-CCCEEEEECHHHH--------HHHHHHHHhh-----CccCCeEEEECHHHHHHHHHcCCCCcee
Confidence 35777777665 3478899998865 4566665421 1245678999999999999999876544
Done!