Your job contains 1 sequence.
>017035
MKREEMDGSCMDESTTTDSASTSPPITFPASIPPTKSPESLCRVGSGASSVILDSEAGVE
AESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDA
VTNFKQISCAGTSSDDGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKR
VIKHGEGDGAATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGST
SKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDR
QLYIDWKARTGPIENPVEPVQMMRLFGVNIFKIPGNGLVGVDKIGCNINNNNNNGKRLRE
MELLSLECSKKQRMIGAL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017035
(378 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 1097 4.2e-111 1
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 1042 2.8e-105 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 1027 1.1e-103 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 931 1.6e-93 1
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 438 2.8e-41 1
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 420 2.3e-39 1
TAIR|locus:2026058 - symbol:AT1G51120 species:3702 "Arabi... 416 6.1e-39 1
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 414 9.9e-39 1
TAIR|locus:2015832 - symbol:AT1G50680 species:3702 "Arabi... 411 2.1e-38 1
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 386 5.7e-38 2
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 392 2.1e-36 1
TAIR|locus:2080782 - symbol:AT3G11580 species:3702 "Arabi... 385 1.2e-35 1
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 359 6.7e-33 1
TAIR|locus:2194007 - symbol:ERF73 "ethylene response fact... 192 9.9e-15 1
TAIR|locus:2170101 - symbol:ERF110 "ethylene response fa... 173 1.3e-12 1
TAIR|locus:2018635 - symbol:RAP2.6 "related to AP2 6" spe... 167 5.9e-12 1
TAIR|locus:2064417 - symbol:HSI2 "high-level expression o... 188 1.5e-11 1
TAIR|locus:2018289 - symbol:ERF14 "Ethylene-responsive el... 162 2.1e-11 1
TAIR|locus:2090975 - symbol:RAP2.2 "related to AP2 2" spe... 181 2.2e-11 1
TAIR|locus:2024249 - symbol:ERF10 "ERF domain protein 10"... 171 2.8e-11 1
TAIR|locus:2167659 - symbol:ERF9 "erf domain protein 9" s... 159 4.5e-11 1
TAIR|locus:2116592 - symbol:HSL1 "HSI2-like 1" species:37... 183 5.3e-11 1
TAIR|locus:2087065 - symbol:ERF4 "ethylene responsive ele... 161 8.1e-11 1
TAIR|locus:2061956 - symbol:ERF71 "ethylene response fact... 155 1.2e-10 1
UNIPROTKB|Q5MFV2 - symbol:BIERF2 "BTH-induced ERF transcr... 164 1.5e-10 1
TAIR|locus:2009655 - symbol:ERF8 "ethylene response facto... 152 2.6e-10 1
TAIR|locus:2176511 - symbol:AT5G43410 species:3702 "Arabi... 152 2.6e-10 1
TAIR|locus:2086203 - symbol:ESE1 "ethylene and salt induc... 151 3.4e-10 1
TAIR|locus:2197076 - symbol:RAP2.12 "related to AP2 12" s... 170 3.5e-10 1
TAIR|locus:2198978 - symbol:AT1G80580 species:3702 "Arabi... 163 5.7e-10 1
TAIR|locus:2126460 - symbol:ARF16 "auxin response factor ... 172 7.2e-10 1
TAIR|locus:2032500 - symbol:ERF11 "ERF domain protein 11"... 148 7.3e-10 1
TAIR|locus:2145477 - symbol:SHN3 "shine3" species:3702 "A... 147 9.4e-10 1
TAIR|locus:2175098 - symbol:ARF4 "auxin response factor 4... 171 1.2e-09 1
TAIR|locus:2089368 - symbol:EBP "ethylene-responsive elem... 159 1.4e-09 1
TAIR|locus:2148022 - symbol:SHN2 "shine2" species:3702 "A... 145 1.6e-09 1
TAIR|locus:2008021 - symbol:ERF3 "ethylene responsive ele... 154 2.6e-09 1
TAIR|locus:2825329 - symbol:AT1G71450 species:3702 "Arabi... 141 4.3e-09 1
TAIR|locus:2092339 - symbol:ERF7 "ethylene response facto... 154 5.6e-09 1
TAIR|locus:2176095 - symbol:ABR1 "ABA REPRESSOR1" species... 160 6.1e-09 1
TAIR|locus:2088439 - symbol:FUS3 "FUSCA 3" species:3702 "... 157 7.5e-09 1
TAIR|locus:2093166 - symbol:ABI3 "AT3G24650" species:3702... 163 8.2e-09 1
TAIR|locus:2183861 - symbol:Rap2.6L "related to AP2 6l" s... 142 1.0e-08 2
TAIR|locus:2158118 - symbol:AT5G67000 species:3702 "Arabi... 137 1.2e-08 1
TAIR|locus:2038927 - symbol:AT2G20350 species:3702 "Arabi... 135 1.9e-08 1
UNIPROTKB|Q5MFV3 - symbol:BIERF1 "BTH-induced ERF transcr... 155 2.3e-08 1
TAIR|locus:2128429 - symbol:CRF2 "AT4G23750" species:3702... 153 2.8e-08 1
TAIR|locus:2154272 - symbol:CRF3 "AT5G53290" species:3702... 153 3.0e-08 1
UNIPROTKB|Q6Z1Z3 - symbol:IDEF1 "B3 domain-containing pro... 153 3.2e-08 1
TAIR|locus:505006142 - symbol:CRF7 "AT1G22985" species:37... 133 3.2e-08 1
TAIR|locus:2058641 - symbol:DEAR3 "DREB and EAR motif pro... 133 3.2e-08 1
TAIR|locus:2132962 - symbol:CRF4 "AT4G27950" species:3702... 152 3.4e-08 1
TAIR|locus:2129111 - symbol:AT4G16750 species:3702 "Arabi... 132 4.1e-08 1
UNIPROTKB|Q8VXC3 - symbol:ebp-89 "Ethylene responsive pro... 151 4.1e-08 1
UNIPROTKB|Q7XKC5 - symbol:LOC_Os04g58000 "B3 domain-conta... 153 4.6e-08 1
TAIR|locus:2057517 - symbol:ARF10 "auxin response factor ... 156 4.6e-08 1
TAIR|locus:2032170 - symbol:LEC2 "LEAFY COTYLEDON 2" spec... 151 5.4e-08 1
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 154 6.1e-08 1
TAIR|locus:2074765 - symbol:CEJ1 "cooperatively regulated... 130 6.8e-08 1
TAIR|locus:2116224 - symbol:RRTF1 "redox responsive trans... 146 8.5e-08 1
TAIR|locus:2086213 - symbol:TDR1 "Transcriptional Regulat... 129 8.8e-08 1
TAIR|locus:2155498 - symbol:DEAR2 "DREB and EAR motif pro... 133 9.6e-08 1
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 152 1.0e-07 1
TAIR|locus:2010346 - symbol:AT1G12890 species:3702 "Arabi... 141 1.1e-07 1
TAIR|locus:2032510 - symbol:ERF12 "ERF domain protein 12"... 135 1.2e-07 1
TAIR|locus:2151576 - symbol:AT5G61590 species:3702 "Arabi... 138 1.2e-07 1
TAIR|locus:2057609 - symbol:ETT "ETTIN" species:3702 "Ara... 151 1.4e-07 1
TAIR|locus:2183174 - symbol:RAP2.11 "related to AP2 11" s... 143 1.5e-07 1
UNIPROTKB|Q5MFV0 - symbol:BIERF4 "BTH-induced ERF transcr... 146 1.6e-07 1
TAIR|locus:2035257 - symbol:AT1G01250 species:3702 "Arabi... 128 1.9e-07 2
TAIR|locus:2086223 - symbol:ERF1 "ethylene response facto... 139 2.0e-07 1
TAIR|locus:2029436 - symbol:ARF17 "auxin response factor ... 149 2.2e-07 1
UNIPROTKB|P37398 - symbol:VP1 "B3 domain-containing prote... 150 2.3e-07 1
TAIR|locus:2008216 - symbol:PLT2 "PLETHORA 2" species:370... 148 2.7e-07 1
TAIR|locus:2037698 - symbol:SHN1 "SHINE 1" species:3702 "... 135 3.1e-07 1
TAIR|locus:2156171 - symbol:AT5G61890 species:3702 "Arabi... 140 3.2e-07 1
TAIR|locus:2031890 - symbol:ESR1 "ENHANCER OF SHOOT REGEN... 143 3.5e-07 1
TAIR|locus:2183304 - symbol:AT5G07310 species:3702 "Arabi... 140 4.0e-07 1
TAIR|locus:2131854 - symbol:CBF1 "C-repeat/DRE binding fa... 136 4.2e-07 1
TAIR|locus:2173113 - symbol:CBF4 "C-repeat-binding factor... 137 4.4e-07 1
TAIR|locus:2005493 - symbol:AP2 "APETALA 2" species:3702 ... 144 4.7e-07 1
TAIR|locus:2026301 - symbol:CRF8 "AT1G71130" species:3702... 122 5.1e-07 1
TAIR|locus:2134128 - symbol:AT4G32800 species:3702 "Arabi... 136 5.4e-07 1
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 145 6.4e-07 1
TAIR|locus:2024076 - symbol:DRNL "DORNROSCHEN-like" speci... 140 6.4e-07 1
TAIR|locus:2176187 - symbol:AT5G51190 species:3702 "Arabi... 135 7.4e-07 1
TAIR|locus:2029491 - symbol:RAP2.4 "related to AP2 4" spe... 140 7.9e-07 1
TAIR|locus:2131849 - symbol:DREB1A "dehydration response ... 134 8.5e-07 1
TAIR|locus:2091891 - symbol:PLT1 "PLETHORA 1" species:370... 143 9.8e-07 1
TAIR|locus:2036288 - symbol:ARF22 "auxin response factor ... 143 1.0e-06 1
TAIR|locus:1005716457 - symbol:RAP2.9 "related to AP2 9" ... 119 1.1e-06 1
UNIPROTKB|A4LBC0 - symbol:LFL1 "B3 domain-containing prot... 140 1.1e-06 2
TAIR|locus:2131834 - symbol:CBF2 "C-repeat/DRE binding fa... 133 1.1e-06 1
TAIR|locus:2044845 - symbol:HRD "HARDY" species:3702 "Ara... 128 1.1e-06 1
TAIR|locus:2145249 - symbol:tny "TINY" species:3702 "Arab... 133 1.2e-06 1
TAIR|locus:2129116 - symbol:ERF-1 "ethylene responsive el... 136 1.2e-06 1
TAIR|locus:2115005 - symbol:RAP2.10 "related to AP2 10" s... 130 1.3e-06 1
TAIR|locus:2014731 - symbol:ARF14 "auxin response factor ... 142 1.4e-06 1
TAIR|locus:2058764 - symbol:ERF38 "ERF family protein 38"... 129 1.7e-06 1
TAIR|locus:2094897 - symbol:AT3G16280 species:3702 "Arabi... 133 1.8e-06 1
WARNING: Descriptions of 76 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 1097 (391.2 bits), Expect = 4.2e-111, P = 4.2e-111
Identities = 227/333 (68%), Positives = 258/333 (77%)
Query: 6 MDGSCMDEXXXXXXXXXXPPITFPASIPPTKSPESLCRVGSGASSVILDSEAGVEAESRK 65
MD SC+DE S PP + L R+GSG SSV+LD E G+E ESRK
Sbjct: 1 MDSSCIDEISSSTSESFSATTAKKLSPPPAAALR-LYRMGSGGSSVVLDPENGLETESRK 59
Query: 66 LPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFK 125
LPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNE+EEAAR+YDIAA RFRGRDAV NFK
Sbjct: 60 LPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFK 119
Query: 126 QISCAGTSSDDGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQS-KRNYGL--DANGKRVI 182
+ +DGD+ AFL +HSK+EIVDMLRKHTY DELEQ+ KR L DANGKR
Sbjct: 120 NVL------EDGDL--AFLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKR-- 169
Query: 183 KHGEGDGAATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGS--T 240
+G++T +D+VLK R+ LFEKAVTPSDVGKLNRLVIPKQHAEKHFPL S S
Sbjct: 170 -----NGSSTT-QNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAV 223
Query: 241 SKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDR 300
+KG+L+NFEDV GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+V+F RSTG +R
Sbjct: 224 TKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLER 283
Query: 301 QLYIDWKARTGPIENPVEPVQMMRLFGVNIFKI 333
QLYIDWK R+GP ENPV+ V +RLFGV+IF +
Sbjct: 284 QLYIDWKVRSGPRENPVQVV--VRLFGVDIFNV 314
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 162/253 (64%), Positives = 192/253 (75%)
Query: 135 DDGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQS-KRNYGL--DANGKRVIKHGEGDGAA 191
+DGD+ AFL +HSK+EIVDMLRKHTY DELEQ+ KR L DANGKR +G++
Sbjct: 123 EDGDL--AFLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKR-------NGSS 173
Query: 192 TAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGS--TSKGLLLNFE 249
T +D+VLK R+ LFEKAVTPSDVGKLNRLVIPKQHAEKHFPL S S +KG+L+NFE
Sbjct: 174 TT-QNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFE 232
Query: 250 DVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKAR 309
DV GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+V+F RSTG +RQLYIDWK R
Sbjct: 233 DVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWKVR 292
Query: 310 TGPIENPVEPVQMMRLFGVNIFKIPG---NGLVGVDKIGCXXXXXXXXGKRLREME-LLS 365
+GP ENPV+ V +RLFGV+IF + N +V V C GKR R+++ + +
Sbjct: 293 SGPRENPVQVV--VRLFGVDIFNVTTVKPNDVVAV----CG-------GKRSRDVDDMFA 339
Query: 366 LECSKKQRMIGAL 378
L CSKKQ +I AL
Sbjct: 340 LRCSKKQAIINAL 352
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
Identities = 221/344 (64%), Positives = 251/344 (72%)
Query: 6 MDGSCMDEXXXXXXX---XXXP-PITFPA---SIPPTKSPESLCRVGSGASSVILDSEAG 58
M+ SC+D+ P P T S PP S L R+GSG SSV+LDSE G
Sbjct: 1 MEYSCVDDSSTTSESLSISTTPKPTTTTEKKLSSPPATSMR-LYRMGSGGSSVVLDSENG 59
Query: 59 VEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGR 118
VE ESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAA +YDIA +RFRGR
Sbjct: 60 VETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGR 119
Query: 119 DAVTNFKQISCAGTSSDDGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANG 178
DAVTNFK + D D E AFL +HSK+EIVDMLRKHTY DE EQS+R + ++ +G
Sbjct: 120 DAVTNFK------SQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKF-VNGDG 172
Query: 179 KRVIKHGEGDGAATA-FGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQS 237
KR G TA +G+D VL+AR+ LFEK VTPSDVGKLNRLVIPKQHAEKHFPL +
Sbjct: 173 KR-------SGLETATYGNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPA 225
Query: 238 GSTS--------KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDI 289
+T+ KG+L+N ED TGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+
Sbjct: 226 MTTAMGMNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDV 285
Query: 290 VSFHRSTGGDRQLYIDWKARTGPIENPVEPVQMMRLFGVNIFKI 333
V F RSTG DRQLYI WK R+ P++ V RLFGVNIF +
Sbjct: 286 VCFERSTGPDRQLYIHWKVRSSPVQTVV------RLFGVNIFNV 323
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 152/254 (59%), Positives = 178/254 (70%)
Query: 135 DDGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGAATAF 194
D D E AFL +HSK+EIVDMLRKHTY DE EQS+R + ++ +GKR G AT +
Sbjct: 130 DGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKF-VNGDGKR-----SGLETAT-Y 182
Query: 195 GSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS--------KGLLL 246
G+D VL+AR+ LFEK VTPSDVGKLNRLVIPKQHAEKHFPL + +T+ KG+L+
Sbjct: 183 GNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLI 242
Query: 247 NFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDW 306
N ED TGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+V F RSTG DRQLYI W
Sbjct: 243 NLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQLYIHW 302
Query: 307 KARTGPIENPVEPVQMMRLFGVNIFKIPGN--GLVGVDKIGCXXXXXXXXGKRLREMELL 364
K R+ P++ V RLFGVNIF + V V+ +G KR RE +L
Sbjct: 303 KVRSSPVQTVV------RLFGVNIFNVSNEKPNDVAVECVG---------KKRSREDDLF 347
Query: 365 SLECSKKQRMIGAL 378
SL CSKKQ +I L
Sbjct: 348 SLGCSKKQAIINIL 361
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
Identities = 219/343 (63%), Positives = 254/343 (74%)
Query: 6 MDGSCMDEXXXXXXXXXXPPITFPASIPPTKSPESLCRVGSGASSVILDSEAGVEAESRK 65
M+ S +DE P PA S +L R+GSG SSV+LDSE GVEAESRK
Sbjct: 1 MESSSVDESTTSTGSICETPAITPAK---KSSVGNLYRMGSG-SSVVLDSENGVEAESRK 56
Query: 66 LPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFK 125
LPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAARAYD+A RFR RDAVTNFK
Sbjct: 57 LPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFK 116
Query: 126 QISCAGTSSDDGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKR-VIKH 184
+ D D E+ FL+SHSKSEIVDMLRKHTYN+ELEQSKR + N R ++
Sbjct: 117 DVKM------DED-EVDFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTS 169
Query: 185 G-EGDGAATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS-K 242
G DG +T G ++ + LFEKAVTPSDVGKLNRLVIPK HAEKHFPL S + S K
Sbjct: 170 GLSNDGVSTT-G----FRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVK 224
Query: 243 GLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQL 302
G+LLNFEDV GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+VSF RS G D+QL
Sbjct: 225 GVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQL 284
Query: 303 YIDWKARTGPIENPVEPVQMMRLFGVNIF-KIPGNGLVGVDKI 344
YI WK+R+G + ++ +++RLFGVNI + N +VG ++
Sbjct: 285 YIGWKSRSG---SDLDAGRVLRLFGVNISPESSRNDVVGNKRV 324
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 124/235 (52%), Positives = 155/235 (65%)
Query: 153 VDMLRKHTYNDELEQ-SKRNYGLDANGKRVIKHGEGDGAATAFGS----DRV----LKAR 203
VD L H+ ++ ++ K Y + + ++G G+ T S D V ++
Sbjct: 125 VDFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGVSTTGFRSA 184
Query: 204 DQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS-KGLLLNFEDVTGKVWRFRYSY 262
+ LFEKAVTPSDVGKLNRLVIPK HAEKHFPL S + S KG+LLNFEDV GKVWRFRYSY
Sbjct: 185 EALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSY 244
Query: 263 WNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPIENPVEPVQM 322
WNSSQSYVLTKGWSRFVKEKNL+AGD+VSF RS G D+QLYI WK+R+G + ++ ++
Sbjct: 245 WNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSRSG---SDLDAGRV 301
Query: 323 MRLFGVNIFKIPGNGLVGVDKIGCXXXXXXXXGKRLREMELLSLECSKKQRMIGA 377
+RLFGVNI D +G KR+ + E+LSL CSKKQR+ A
Sbjct: 302 LRLFGVNISPESSRN----DVVG---------NKRVNDTEMLSLVCSKKQRIFHA 343
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 931 (332.8 bits), Expect = 1.6e-93, P = 1.6e-93
Identities = 201/311 (64%), Positives = 234/311 (75%)
Query: 31 SIPPTKS--PESLC-RVGSGASSVILDSEAGVE----AESRKLPSSKYKGVVPQPNGRWG 83
SIP KS P SL R+GSG +SV+LDSE GVE AESRKLPSS++KGVVPQPNGRWG
Sbjct: 16 SIPARKSSSPASLLYRMGSG-TSVVLDSENGVEVEVEAESRKLPSSRFKGVVPQPNGRWG 74
Query: 84 AQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQISCAGTSSDDGDIEMAF 143
AQIYEKHQRVWLGTFNEE+EAARAYD+AA RFRGRDAVTNFK T+ ++ E+ F
Sbjct: 75 AQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKD-----TTFEE---EVEF 126
Query: 144 LSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGAA-TAFGSDRVLKA 202
L++HSKSEIVDMLRKHTY +EL+Q KRN D NGK T F K
Sbjct: 127 LNAHSKSEIVDMLRKHTYKEELDQRKRNR--DGNGKETTAFALASMVVMTGF------KT 178
Query: 203 RDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS---KGLLLNFEDVTGKVWRFR 259
+ LFEK VTPSDVGKLNRLVIPK AEKHFPL G+ + KG+LLNFEDV GKVWRFR
Sbjct: 179 AELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFR 238
Query: 260 YSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPIENPVEP 319
YSYWNSSQSYVLTKGWSRFVKEK L AGD++SF RS D++ +I WK+++G ++ +E
Sbjct: 239 YSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSG-LD--LET 295
Query: 320 VQMMRLFGVNI 330
++MRLFGV+I
Sbjct: 296 GRVMRLFGVDI 306
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 83/122 (68%), Positives = 97/122 (79%)
Query: 198 RVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWR 257
R + R+ +F+K VTPSDVGKLNRLVIPKQHAE+ FPL S S KGLLLNFED+TGK WR
Sbjct: 26 REVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFEDLTGKSWR 85
Query: 258 FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHR---STGGDRQLYIDWKARTGPIE 314
FRYSYWNSSQSYV+TKGWSRFVK+K L AGDIVSF R +G D +L+IDW+ R +
Sbjct: 86 FRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRRRPKVPD 145
Query: 315 NP 316
+P
Sbjct: 146 HP 147
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 84/135 (62%), Positives = 99/135 (73%)
Query: 203 RDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSY 262
++ +F+K VTPSDVGKLNRLVIPKQHAE++FPL S + G LLNF+D GK+WRFRYSY
Sbjct: 52 KEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYSY 111
Query: 263 WNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQ---LYIDWKARTGPIENPVEP 319
WNSSQSYV+TKGWSRFVKEK L AGDIVSF R G + + LYIDW+ R P + V+
Sbjct: 112 WNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHR--PDMSLVQA 169
Query: 320 VQMMRLFGVNIFKIP 334
Q FG N F P
Sbjct: 170 HQFGN-FGFN-FNFP 182
>TAIR|locus:2026058 [details] [associations]
symbol:AT1G51120 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC079828
HSSP:Q9ZWM9 KO:K09287 HOGENOM:HOG000090522 ProtClustDB:CLSN2682911
EMBL:AY560883 IPI:IPI00548594 PIR:F96548 RefSeq:NP_175524.1
UniGene:At.50656 ProteinModelPortal:Q9C688 SMR:Q9C688 PRIDE:Q9C688
DNASU:841535 EnsemblPlants:AT1G51120.1 GeneID:841535
KEGG:ath:AT1G51120 TAIR:At1g51120 eggNOG:NOG252474
InParanoid:Q9C688 OMA:EEMKTET PhylomeDB:Q9C688
Genevestigator:Q9C688 Uniprot:Q9C688
Length = 352
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 99/237 (41%), Positives = 137/237 (57%)
Query: 68 SSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQI 127
++K+KGVV Q NG WGAQIY H+R+WLGTF EAA AYD A+ + R DA + +
Sbjct: 44 TTKFKGVVQQQNGHWGAQIYADHRRIWLGTFKSAHEAAAAYDSASIKLRSFDA-NSHRNF 102
Query: 128 SCAGTSSDDGDIEMAFLSSHSKSEIVDMLRKHTYNDELE---QSKRNYGLDANGKRVIKH 184
+ + + D + + + + I D +H + D L Q N + K+V+
Sbjct: 103 PWSDFTLHEPDFQECYTTEAVLNMIRDGSYQHKFRDFLRIRSQIVANINI-VGSKQVLGG 161
Query: 185 GEGDGAATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGS----- 239
GEG G S++ QLF+K +TPSDVGKLNRLVIPK++A K+ P S
Sbjct: 162 GEG-GQE----SNKCFSCT-QLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKE 215
Query: 240 TSKGLL---LNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFH 293
TS+G+ + F D + W+FRY YW SSQS+V T+GW+ FVKEKNLK DI+ F+
Sbjct: 216 TSEGVEDVEVVFYDRAMRQWKFRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDIIVFY 272
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 77/110 (70%), Positives = 91/110 (82%)
Query: 203 RDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS---KGLLLNFEDVTGKVWRFR 259
R+ +F+K VTPSDVGKLNRLVIPKQHAE++FPL + +T+ KGLLLNFED +G WRFR
Sbjct: 19 REHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSGNSWRFR 78
Query: 260 YSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKAR 309
YSYWNSSQSYV+TKGWSRFVK+K L AGDIVSF R + +LYIDW+ R
Sbjct: 79 YSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWRRR 128
>TAIR|locus:2015832 [details] [associations]
symbol:AT1G50680 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PRINTS:PR00367
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC079279 HSSP:Q9ZWM9 KO:K09287 EMBL:AY560882
IPI:IPI00527323 PIR:E96543 RefSeq:NP_175483.1 UniGene:At.50579
ProteinModelPortal:Q9C6P5 SMR:Q9C6P5 PaxDb:Q9C6P5 PRIDE:Q9C6P5
EnsemblPlants:AT1G50680.1 GeneID:841490 KEGG:ath:AT1G50680
TAIR:At1g50680 eggNOG:NOG331833 HOGENOM:HOG000090522
InParanoid:Q9C6P5 OMA:GEVNQES PhylomeDB:Q9C6P5
ProtClustDB:CLSN2682911 Genevestigator:Q9C6P5 Uniprot:Q9C6P5
Length = 337
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 96/236 (40%), Positives = 139/236 (58%)
Query: 70 KYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQISC 129
KYKGVV Q NG WGAQIY H+R+WLGTF +EAA AYD A+ + R DA + +
Sbjct: 27 KYKGVVQQQNGHWGAQIYADHKRIWLGTFKSADEAATAYDSASIKLRSFDA-NSHRNFPW 85
Query: 130 AGTSSDDGDIEMAFLSSHSKSEIVDMLRKHTYNDELE-QSKRNYGLDANGKRVIKHGEGD 188
+ + ++ D + + + + I D +H + D L +S+ ++ G + + GE +
Sbjct: 86 STITLNEPDFQNCYTTETVLNMIRDGSYQHKFRDFLRIRSQIVASINIGGPKQAR-GEVN 144
Query: 189 GAATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSK---GLL 245
SD+ QLF+K +TPSDVGKLNRLVIPK++A K+ P S S+ G +
Sbjct: 145 QE-----SDKCFSCT-QLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEI 198
Query: 246 L-NFEDV-------TGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFH 293
+ + EDV + W+FRY YW SSQS+V T+GW+ FVKEKNLK D+++F+
Sbjct: 199 VGSVEDVEVVFYDRAMRQWKFRYCYWKSSQSFVFTRGWNSFVKEKNLKEKDVIAFY 254
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 386 (140.9 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 74/117 (63%), Positives = 89/117 (76%)
Query: 203 RDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQS----------GSTSKGLLLNFEDVT 252
++ LFEK++TPSDVGKLNRLVIPKQHAEK+FPL + S+ KG+LL+FED +
Sbjct: 42 KESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDES 101
Query: 253 GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKAR 309
GK WRFRYSYWNSSQSYVLTKGWSRFVK+K L GD+V F R R+L+I W+ R
Sbjct: 102 GKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRR 158
Score = 37 (18.1 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 312 PIENPVEPVQMMRLFGVNI 330
P + V + +RLFGVN+
Sbjct: 218 PSSSVVGSSRTVRLFGVNL 236
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 74/114 (64%), Positives = 89/114 (78%)
Query: 199 VLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS---KGLLLNFEDVTGKV 255
V++ ++ LFEK +TPSDVGKLNRLVIPKQHAE++FPL + + KGLLL FED GK
Sbjct: 30 VVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKP 89
Query: 256 WRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKAR 309
WRFRYSYWNSSQSYVLTKGWSR+VKEK+L AGD+V FHR + +I W+ R
Sbjct: 90 WRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRRR 143
>TAIR|locus:2080782 [details] [associations]
symbol:AT3G11580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009062
"fatty acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC008153 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:AJ441076 EMBL:AK175281 EMBL:BT029371 IPI:IPI00539345
IPI:IPI00547561 RefSeq:NP_187765.2 RefSeq:NP_850559.1
UniGene:At.39724 ProteinModelPortal:Q8RYD3 SMR:Q8RYD3
EnsemblPlants:AT3G11580.1 GeneID:820331 KEGG:ath:AT3G11580
TAIR:At3g11580 eggNOG:NOG285931 InParanoid:Q8RYD3 OMA:CHGDAVE
PhylomeDB:Q8RYD3 ProtClustDB:CLSN2918062 Genevestigator:Q8RYD3
Uniprot:Q8RYD3
Length = 267
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 78/136 (57%), Positives = 97/136 (71%)
Query: 196 SDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQS-----GS------TSKGL 244
+D + R+ LFEK++TPSDVGKLNRLVIPKQHAEK+FPL + GS T KG+
Sbjct: 18 NDVAIAQRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGM 77
Query: 245 LLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYI 304
LL+FED +GK W+FRYSYWNSSQSYVLTKGWSR+VK+K+L AGD+V F R +L+I
Sbjct: 78 LLSFEDESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFI 137
Query: 305 DWKARTGPIENPVEPV 320
W+ R +P V
Sbjct: 138 GWRRRGEASSSPAVSV 153
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 74/137 (54%), Positives = 94/137 (68%)
Query: 182 IKHGEGDGAATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS 241
I+ D + S+R R+ +F+K +TPSDVGKLNRLVIPKQHAE FPL+
Sbjct: 15 IRASSSDHTNYFYSSER----REHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQN- 69
Query: 242 KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHR------S 295
G +L+F+D GK+WRFRYSYWNSSQSYV+TKGWSRFVKEK L AGD VSF+R +
Sbjct: 70 -GTVLDFQDKNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRGYIPDDN 128
Query: 296 TGGDRQ---LYIDWKAR 309
+R+ ++IDW+ R
Sbjct: 129 AQPERRRKIMFIDWRPR 145
>TAIR|locus:2194007 [details] [associations]
symbol:ERF73 "ethylene response factor 73" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;IDA] [GO:0034059 "response to
anoxia" evidence=IGI] [GO:0009873 "ethylene mediated signaling
pathway" evidence=IMP;TAS] [GO:0071369 "cellular response to
ethylene stimulus" evidence=IMP] [GO:0071456 "cellular response to
hypoxia" evidence=IEP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0071456 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0034059 UniGene:At.35111 IPI:IPI00541631
RefSeq:NP_001077812.1 UniGene:At.68119 ProteinModelPortal:F4IDA7
SMR:F4IDA7 EnsemblPlants:AT1G72360.2 GeneID:843568
KEGG:ath:AT1G72360 OMA:KKHEPND Uniprot:F4IDA7
Length = 262
Score = 192 (72.6 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 49/122 (40%), Positives = 70/122 (57%)
Query: 57 AGVEAESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQR 114
+G ++ +K SS+YKG+ +P GRW A+I + K RVWLGTFN EEAARAYD+ A+R
Sbjct: 62 SGSASDGKKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKR 121
Query: 115 FRGRDAVTNF------KQISCAGT-----SSDDGDIEMAFLSSHSKSEIVDMLRKHTYND 163
RG A NF K+ + A T + + D+++A +SS S +D L + D
Sbjct: 122 IRGAKAKLNFPNESSGKRKAKAKTVQQVEENHEADLDVAVVSSAPSSSCLDFLWEENNPD 181
Query: 164 EL 165
L
Sbjct: 182 TL 183
>TAIR|locus:2170101 [details] [associations]
symbol:ERF110 "ethylene response factor 110"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048510 "regulation of timing of transition from vegetative to
reproductive phase" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AB026650
EMBL:AJ580378 IPI:IPI00543457 RefSeq:NP_199819.3 UniGene:At.29751
ProteinModelPortal:Q70II3 SMR:Q70II3 STRING:Q70II3
EnsemblPlants:AT5G50080.1 GeneID:835072 KEGG:ath:AT5G50080
TAIR:At5g50080 eggNOG:NOG295694 HOGENOM:HOG000210042
InParanoid:Q70II3 OMA:EDLINYW PhylomeDB:Q70II3
ProtClustDB:CLSN2920550 Genevestigator:Q70II3 Uniprot:Q70II3
Length = 220
Score = 173 (66.0 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 38 PESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWL 95
P S RV S + + E+R+ +Y+GV +P G+W A+I + H+ RVWL
Sbjct: 45 PSSFARVDSSHNPIEESMSKAFPEEARE-KKRRYRGVRQRPWGKWAAEIRDPHRAARVWL 103
Query: 96 GTFNEEEEAARAYDIAAQRFRGRDAVTNFKQ 126
GTF+ E AARAYD AA RFRG A NF +
Sbjct: 104 GTFDTAEAAARAYDEAALRFRGNKAKLNFPE 134
>TAIR|locus:2018635 [details] [associations]
symbol:RAP2.6 "related to AP2 6" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009611
"response to wounding" evidence=IEP;RCA] [GO:0006970 "response to
osmotic stress" evidence=IEP] [GO:0009409 "response to cold"
evidence=IEP] [GO:0009651 "response to salt stress"
evidence=IEP;IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP;RCA] [GO:0034605 "cellular response to heat"
evidence=IEP] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0009620 "response to fungus" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0045893
GO:GO:0034605 GO:GO:0009753 GO:GO:0009611 GO:GO:0009873
GO:GO:0003677 GO:GO:0009651 GO:GO:0009409 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 GO:GO:0009658 GO:GO:0009751 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AC005687
EMBL:AY062847 EMBL:AY114582 EMBL:AF003099 IPI:IPI00532143
PIR:D96498 RefSeq:NP_175008.1 UniGene:At.10778
ProteinModelPortal:Q7G1L2 SMR:Q7G1L2 EnsemblPlants:AT1G43160.1
GeneID:840915 KEGG:ath:AT1G43160 TAIR:At1g43160 InParanoid:Q7G1L2
PhylomeDB:Q7G1L2 Genevestigator:Q7G1L2 Uniprot:Q7G1L2
Length = 192
Score = 167 (63.8 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 38/80 (47%), Positives = 49/80 (61%)
Query: 49 SSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFNEEEEAAR 106
S+V + E+ + E K KY+GV +P G+W A+I + H+ RVWLGTF E AAR
Sbjct: 43 SAVTKECESSMSLERPK----KYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAAR 98
Query: 107 AYDIAAQRFRGRDAVTNFKQ 126
AYD AA RFRG A NF +
Sbjct: 99 AYDAAALRFRGSKAKLNFPE 118
>TAIR|locus:2064417 [details] [associations]
symbol:HSI2 "high-level expression of sugar-inducible
gene 2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009737 "response to abscisic acid stimulus" evidence=TAS]
[GO:0009744 "response to sucrose stimulus" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0010030 "positive regulation of seed germination"
evidence=IGI] [GO:2000034 "regulation of seed maturation"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005739
GO:GO:0009737 GO:GO:0005634 GO:GO:0045892 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0010030
GO:GO:0009744 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936 EMBL:U93215
HSSP:Q9ZWM9 EMBL:AB206553 EMBL:AY062492 IPI:IPI00532565 PIR:G84708
RefSeq:NP_850146.1 UniGene:At.27438 ProteinModelPortal:Q8W4L5
SMR:Q8W4L5 IntAct:Q8W4L5 STRING:Q8W4L5 PaxDb:Q8W4L5 PRIDE:Q8W4L5
EnsemblPlants:AT2G30470.1 GeneID:817597 KEGG:ath:AT2G30470
TAIR:At2g30470 eggNOG:NOG244543 HOGENOM:HOG000084353
InParanoid:Q8W4L5 OMA:CMNASCG PhylomeDB:Q8W4L5
ProtClustDB:CLSN2918136 Genevestigator:Q8W4L5 GO:GO:2000034
Uniprot:Q8W4L5
Length = 790
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 43/105 (40%), Positives = 65/105 (61%)
Query: 206 LFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYW-- 263
LFEK ++ SD G++ RLV+PK AE +FP S S+G+ L +DV G+ W F++ YW
Sbjct: 294 LFEKTLSASDAGRIGRLVLPKACAEAYFP--PISQSEGIPLKIQDVRGREWTFQFRYWPN 351
Query: 264 NSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKA 308
N+S+ YVL +G + ++ L+AGD V+F R G + + KA
Sbjct: 352 NNSRMYVL-EGVTPCIQSMMLQAGDTVTFSRVDPGGKLIMGSRKA 395
>TAIR|locus:2018289 [details] [associations]
symbol:ERF14 "Ethylene-responsive element binding factor
14" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009873
"ethylene mediated signaling pathway" evidence=TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC000104 HOGENOM:HOG000237624
ProtClustDB:CLSN2681785 EMBL:AY560880 EMBL:BT026421 IPI:IPI00531659
PIR:D86175 RefSeq:NP_171932.1 UniGene:At.50643
ProteinModelPortal:P93822 SMR:P93822 STRING:P93822 PRIDE:P93822
EnsemblPlants:AT1G04370.1 GeneID:839539 KEGG:ath:AT1G04370
TAIR:At1g04370 eggNOG:NOG309663 InParanoid:P93822 OMA:NKTHNIN
PhylomeDB:P93822 Genevestigator:P93822 Uniprot:P93822
Length = 133
Score = 162 (62.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 47/118 (39%), Positives = 63/118 (53%)
Query: 70 KYKGVVPQPNGRWGAQIYE--KH-QRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQ 126
KY+GV +P G++ A+I + KH +RVWLGTF+ E+AARAYD AA RG+ A+ NF
Sbjct: 19 KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPH 78
Query: 127 ISCAGTSSDDGDIEMAFLSSHSKSEIVDM-LRKHTYNDELEQSKRNYGLDAN---GKR 180
GT S A SS S ++ + + DEL + NY N GKR
Sbjct: 79 EYNMGTGSSS----TAANSSSSSQQVFEFEYLDDSVLDELLEYGENYNKTHNINMGKR 132
>TAIR|locus:2090975 [details] [associations]
symbol:RAP2.2 "related to AP2 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0001666 "response to hypoxia"
evidence=IMP] [GO:0010468 "regulation of gene expression"
evidence=IEP] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0046685 "response to arsenic-containing
substance" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0001666 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AB022220
HOGENOM:HOG000237624 ProtClustDB:CLSN2682146 EMBL:AY054539
EMBL:BT000374 EMBL:AY085580 EMBL:AF003095 IPI:IPI00519633
IPI:IPI00544839 RefSeq:NP_566482.1 RefSeq:NP_850582.1
UniGene:At.25146 ProteinModelPortal:Q9LUM4 SMR:Q9LUM4 STRING:Q9LUM4
EnsemblPlants:AT3G14230.1 GeneID:820643 KEGG:ath:AT3G14230
TAIR:At3g14230 eggNOG:NOG250271 InParanoid:Q9LUM4 OMA:SAFDCED
PhylomeDB:Q9LUM4 Genevestigator:Q9LUM4 Uniprot:Q9LUM4
Length = 379
Score = 181 (68.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 41/107 (38%), Positives = 59/107 (55%)
Query: 25 PITFPASIPPTKSP---ESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGR 81
P F A+ P S + VGS + ++S E S++ ++Y+G+ +P G+
Sbjct: 79 PFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGK 138
Query: 82 WGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQ 126
W A+I + K R WLGTF+ EEAARAYD AA+R RG A NF +
Sbjct: 139 WAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPE 185
>TAIR|locus:2024249 [details] [associations]
symbol:ERF10 "ERF domain protein 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 EMBL:AC003027
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
EMBL:AB047649 EMBL:AY560879 IPI:IPI00526738 PIR:E86168
RefSeq:NP_171876.1 UniGene:At.50567 ProteinModelPortal:Q9ZWA2
SMR:Q9ZWA2 STRING:Q9ZWA2 EnsemblPlants:AT1G03800.1 GeneID:839173
KEGG:ath:AT1G03800 TAIR:At1g03800 eggNOG:NOG291029 OMA:QTAVEEP
PhylomeDB:Q9ZWA2 ProtClustDB:CLSN2914355 Genevestigator:Q9ZWA2
Uniprot:Q9ZWA2
Length = 245
Score = 171 (65.3 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 38/67 (56%), Positives = 46/67 (68%)
Query: 70 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQI 127
+Y+GV +P GR+ A+I + K +RVWLG+FN EEAARAYD AA RFRG A TNF I
Sbjct: 52 RYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFPLI 111
Query: 128 SCAGTSS 134
G SS
Sbjct: 112 GYYGISS 118
>TAIR|locus:2167659 [details] [associations]
symbol:ERF9 "erf domain protein 9" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0016020 "membrane" evidence=IDA]
[GO:0006857 "oligopeptide transport" evidence=RCA] [GO:0009873
"ethylene mediated signaling pathway" evidence=TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006952 GO:GO:0009873 GO:GO:0016020
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB005239 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
EMBL:AB047648 EMBL:AY560856 EMBL:BT015876 EMBL:BT020188
IPI:IPI00535860 RefSeq:NP_199234.1 UniGene:At.30087
ProteinModelPortal:Q9FE67 SMR:Q9FE67 IntAct:Q9FE67 STRING:Q9FE67
EnsemblPlants:AT5G44210.1 GeneID:834444 KEGG:ath:AT5G44210
TAIR:At5g44210 eggNOG:NOG249494 InParanoid:Q9FE67 OMA:FACHRER
PhylomeDB:Q9FE67 ProtClustDB:CLSN2916712 Genevestigator:Q9FE67
GermOnline:AT5G44210 Uniprot:Q9FE67
Length = 200
Score = 159 (61.0 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 37/90 (41%), Positives = 56/90 (62%)
Query: 71 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQIS 128
++GV +P GR+ A+I + K RVWLGTF+ EEAARAYD AA+ FRG A TNF +
Sbjct: 33 FRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFP-LP 91
Query: 129 CAGTSSDDGDIEMAFLSSHSKSEIVDMLRK 158
T+ +DG ++++ + + +M R+
Sbjct: 92 GESTTVNDGGENDSYVNRTTVTTAREMTRQ 121
>TAIR|locus:2116592 [details] [associations]
symbol:HSL1 "HSI2-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010030 "positive regulation of seed
germination" evidence=IGI] [GO:2000034 "regulation of seed
maturation" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048316 "seed development" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0010030 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AL021636 EMBL:AL161580 HSSP:Q9ZWM9 eggNOG:NOG244543
HOGENOM:HOG000084353 GO:GO:2000034 EMBL:AB206554 EMBL:AK228013
IPI:IPI00541402 IPI:IPI00931064 PIR:T04644 RefSeq:NP_194929.2
UniGene:At.1885 ProteinModelPortal:Q5CCK4 SMR:Q5CCK4 STRING:Q5CCK4
PaxDb:Q5CCK4 PRIDE:Q5CCK4 EnsemblPlants:AT4G32010.1 GeneID:829332
KEGG:ath:AT4G32010 TAIR:At4g32010 InParanoid:Q5CCK4 OMA:MNALCGA
PhylomeDB:Q5CCK4 ProtClustDB:CLSN2918602 Genevestigator:Q5CCK4
Uniprot:Q5CCK4
Length = 780
Score = 183 (69.5 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 42/107 (39%), Positives = 67/107 (62%)
Query: 206 LFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYW-- 263
LFEK ++ SD G++ RLV+PK AE +FP S +GL L +D+ GK W F++ +W
Sbjct: 285 LFEKVLSASDAGRIGRLVLPKACAEAYFP--PISLPEGLPLKIQDIKGKEWVFQFRFWPN 342
Query: 264 NSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKART 310
N+S+ YVL +G + ++ L+AGD V+F R T + +L + ++ T
Sbjct: 343 NNSRMYVL-EGVTPCIQSMQLQAGDTVTFSR-TEPEGKLVMGYRKAT 387
>TAIR|locus:2087065 [details] [associations]
symbol:ERF4 "ethylene responsive element binding factor
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0010105
"negative regulation of ethylene mediated signaling pathway"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0009723 "response to ethylene
stimulus" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0009864 "induced systemic resistance, jasmonic acid mediated
signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045892 GO:GO:0009873
GO:GO:0009723 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 GO:GO:0010105
GO:GO:0016604 HOGENOM:HOG000237624 GO:GO:0009864 EMBL:AF003098
EMBL:AB008106 EMBL:AP000413 EMBL:AY140030 EMBL:BT010325
EMBL:AY086232 IPI:IPI00539614 PIR:T52019 RefSeq:NP_188139.1
UniGene:At.47551 ProteinModelPortal:O80340 SMR:O80340 IntAct:O80340
STRING:O80340 EnsemblPlants:AT3G15210.1 GeneID:820752
KEGG:ath:AT3G15210 TAIR:At3g15210 eggNOG:NOG298559
InParanoid:O80340 OMA:DCASPPT PhylomeDB:O80340
ProtClustDB:CLSN2679790 Genevestigator:O80340 GermOnline:AT3G15210
Uniprot:O80340
Length = 222
Score = 161 (61.7 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 39/87 (44%), Positives = 50/87 (57%)
Query: 70 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQI 127
+Y+GV +P GR+ A+I + K RVWLGTF+ EEAARAYD AA+ FRG A TNF
Sbjct: 24 RYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFPTF 83
Query: 128 SCAGTSSDDGDIEMAFLSSHSKSEIVD 154
D + F S S+S +D
Sbjct: 84 ----LELSDQKVPTGFARSPSQSSTLD 106
>TAIR|locus:2061956 [details] [associations]
symbol:ERF71 "ethylene response factor 71" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0034059 "response to anoxia"
evidence=IGI] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC002535 GO:GO:0034059 HOGENOM:HOG000237624
EMBL:AY074645 IPI:IPI00523940 PIR:T00432 RefSeq:NP_182274.1
UniGene:At.37019 ProteinModelPortal:O22259 SMR:O22259
EnsemblPlants:AT2G47520.1 GeneID:819365 KEGG:ath:AT2G47520
TAIR:At2g47520 eggNOG:NOG247457 InParanoid:O22259 OMA:MALEDYM
PhylomeDB:O22259 ProtClustDB:CLSN2913160 Genevestigator:O22259
Uniprot:O22259
Length = 171
Score = 155 (59.6 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 31/67 (46%), Positives = 44/67 (65%)
Query: 60 EAESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRG 117
E + ++ + Y+G+ +P G+W A+I + K RVWLGTF +EAARAYD+AA + RG
Sbjct: 39 ERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRG 98
Query: 118 RDAVTNF 124
R A NF
Sbjct: 99 RKAKLNF 105
>UNIPROTKB|Q5MFV2 [details] [associations]
symbol:BIERF2 "BTH-induced ERF transcriptional factor 2"
species:39946 "Oryza sativa Indica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AY831393 ProteinModelPortal:Q5MFV2 SMR:Q5MFV2
Gramene:Q5MFV2 Uniprot:Q5MFV2
Length = 235
Score = 164 (62.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 71 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF---- 124
Y+GV +P GR+ A+I + K RVWLGT++ EEAARAYD AA+ FRG A TNF
Sbjct: 34 YRGVRKRPWGRYAAEIRDPAKKSRVWLGTYDTAEEAARAYDAAAREFRGAKAKTNFPFAS 93
Query: 125 -KQISCAGTSSDDGDIE 140
+ C G+ S + ++
Sbjct: 94 QSMVGCGGSPSSNSTVD 110
>TAIR|locus:2009655 [details] [associations]
symbol:ERF8 "ethylene response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC008007 Gene3D:3.30.730.10 SUPFAM:SSF54171
HOGENOM:HOG000237624 ProtClustDB:CLSN2679790 EMBL:AB036884
EMBL:AK117541 EMBL:BT005401 IPI:IPI00546471 PIR:D96572
RefSeq:NP_175725.1 UniGene:At.4604 ProteinModelPortal:Q9MAI5
SMR:Q9MAI5 IntAct:Q9MAI5 EnsemblPlants:AT1G53170.1 GeneID:841751
KEGG:ath:AT1G53170 TAIR:At1g53170 eggNOG:NOG271218
InParanoid:Q9MAI5 OMA:HESNAAK PhylomeDB:Q9MAI5
Genevestigator:Q9MAI5 GermOnline:AT1G53170 Uniprot:Q9MAI5
Length = 185
Score = 152 (58.6 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 33/65 (50%), Positives = 43/65 (66%)
Query: 62 ESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRD 119
ES +Y+GV +P GR+ A+I + K RVWLGTF+ ++AARAYD AA+ FRG
Sbjct: 22 ESNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVK 81
Query: 120 AVTNF 124
A TNF
Sbjct: 82 AKTNF 86
>TAIR|locus:2176511 [details] [associations]
symbol:AT5G43410 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB025638 HOGENOM:HOG000237624
EMBL:AY560864 EMBL:DQ447034 EMBL:DQ653344 IPI:IPI00538759
RefSeq:NP_199154.1 UniGene:At.50627 ProteinModelPortal:Q9LSX0
SMR:Q9LSX0 EnsemblPlants:AT5G43410.1 GeneID:834360
KEGG:ath:AT5G43410 TAIR:At5g43410 eggNOG:NOG244602
InParanoid:Q9LSX0 OMA:HEYNMGS PhylomeDB:Q9LSX0
ProtClustDB:CLSN2681785 Genevestigator:Q9LSX0 Uniprot:Q9LSX0
Length = 131
Score = 152 (58.6 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 40/84 (47%), Positives = 50/84 (59%)
Query: 70 KYKGVVPQPNGRWGAQIYE--KH-QRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQ 126
KY+GV +P G++ A+I + KH +RVWLGTF+ EEAARAYD AA RG+ A+ NF
Sbjct: 14 KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPH 73
Query: 127 ISCAGTSSDDGDIEMAFLSSHSKS 150
G S MA SS S S
Sbjct: 74 EYNMG-SGVSSSTAMAGSSSASAS 96
>TAIR|locus:2086203 [details] [associations]
symbol:ESE1 "ethylene and salt inducible 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AB025608
HOGENOM:HOG000237624 EMBL:AY974196 EMBL:AY560847 EMBL:BT028890
IPI:IPI00539423 RefSeq:NP_188963.2 UniGene:At.50677
ProteinModelPortal:Q9LTC6 SMR:Q9LTC6 EnsemblPlants:AT3G23220.1
GeneID:821900 KEGG:ath:AT3G23220 TAIR:At3g23220 eggNOG:NOG265349
InParanoid:Q9LTC6 OMA:NFPAEAR PhylomeDB:Q9LTC6
ProtClustDB:CLSN2920270 Genevestigator:Q9LTC6 Uniprot:Q9LTC6
Length = 139
Score = 151 (58.2 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 39/90 (43%), Positives = 50/90 (55%)
Query: 62 ESRKLPSSKYKGVVPQPNGRWGAQIYE--KH-QRVWLGTFNEEEEAARAYDIAAQRFRGR 118
ES KY+GV +P G++ A+I + +H RVWLGTFN E+AARAYD AA RG+
Sbjct: 5 ESYNTNEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQ 64
Query: 119 DAVTNFKQISCAGTSSDDGDIEMAFLSSHS 148
A+ NF +G E A SS S
Sbjct: 65 RAILNFPHEYQMMKDGPNGSHENAVASSSS 94
>TAIR|locus:2197076 [details] [associations]
symbol:RAP2.12 "related to AP2 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0001666 "response to hypoxia"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070483 "detection of hypoxia" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005634 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC009324 GO:GO:0070483 HOGENOM:HOG000237624
EMBL:AY037260 EMBL:AY057545 EMBL:AY113051 EMBL:AY088204
EMBL:AF003105 IPI:IPI00535772 PIR:D96579 RefSeq:NP_001031185.1
RefSeq:NP_175794.1 UniGene:At.20952 UniGene:At.21295
ProteinModelPortal:Q9SSA8 SMR:Q9SSA8 IntAct:Q9SSA8 STRING:Q9SSA8
EnsemblPlants:AT1G53910.1 EnsemblPlants:AT1G53910.2 GeneID:841829
KEGG:ath:AT1G53910 TAIR:At1g53910 eggNOG:NOG262386
InParanoid:Q9SSA8 OMA:NEDAVTT PhylomeDB:Q9SSA8
ProtClustDB:CLSN2682146 Genevestigator:Q9SSA8 Uniprot:Q9SSA8
Length = 358
Score = 170 (64.9 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 41/126 (32%), Positives = 63/126 (50%)
Query: 3 REEMDGSCMDEXXXXXXXXXXPPITFPASIPPTKSPESLCRVGSGASSVILDSEAGVEAE 62
+++ C D+ P F ++ P S + V G LD +A A
Sbjct: 60 KDDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAEGSV-FGKKVTGLDGDAEKSAN 118
Query: 63 SRKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFNEEEEAARAYDIAAQRFRGRDA 120
++ ++Y+G+ +P G+W A+I + + R+WLGTF EEAARAYD AA+R RG A
Sbjct: 119 RKR--KNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKA 176
Query: 121 VTNFKQ 126
NF +
Sbjct: 177 KVNFPE 182
>TAIR|locus:2198978 [details] [associations]
symbol:AT1G80580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC018849 EMBL:AY560844 EMBL:DQ446446 EMBL:BT026038
IPI:IPI00519694 PIR:H96837 RefSeq:NP_178173.1 UniGene:At.50665
ProteinModelPortal:Q9M8M5 SMR:Q9M8M5 EnsemblPlants:AT1G80580.1
GeneID:844397 KEGG:ath:AT1G80580 TAIR:At1g80580 eggNOG:NOG291220
HOGENOM:HOG000090320 InParanoid:Q9M8M5 OMA:KPEPENT PhylomeDB:Q9M8M5
ProtClustDB:CLSN2714206 Genevestigator:Q9M8M5 Uniprot:Q9M8M5
Length = 256
Score = 163 (62.4 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 38/76 (50%), Positives = 47/76 (61%)
Query: 53 LDSEAGVEAESRKLPSSK--YKGVVPQPNGRWGAQIYEKHQRV--WLGTFNEEEEAARAY 108
L E GV+ RK+P + GV +P GRW A+I ++ R WLGTF+ EEAARAY
Sbjct: 97 LTKEGGVK-RGRKMPQKTGGFMGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAY 155
Query: 109 DIAAQRFRGRDAVTNF 124
D AA+R RG A TNF
Sbjct: 156 DAAARRLRGTKAKTNF 171
>TAIR|locus:2126460 [details] [associations]
symbol:ARF16 "auxin response factor 16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0048829 "root cap development"
evidence=IGI;IMP] [GO:0051301 "cell division" evidence=IGI]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0051301 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL161576 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0035198 GO:GO:0007389
HOGENOM:HOG000241141 eggNOG:NOG315592 EMBL:AL078464 EMBL:AY059792
EMBL:AY091198 EMBL:EU550120 EMBL:EU550121 EMBL:EU550122
EMBL:EU550123 EMBL:EU550124 EMBL:EU550125 EMBL:EU550126
EMBL:EU550127 EMBL:EU550128 EMBL:EU550129 EMBL:EU550130
EMBL:EU550131 EMBL:EU550132 EMBL:EU550133 EMBL:EU550134
EMBL:EU550135 EMBL:EU550136 EMBL:EU550137 EMBL:EU550138
EMBL:EU550139 EMBL:EU550140 EMBL:EU550141 EMBL:EU550142
EMBL:EU550143 IPI:IPI00528149 PIR:T08984 RefSeq:NP_567841.1
UniGene:At.3365 ProteinModelPortal:Q93YR9 SMR:Q93YR9 IntAct:Q93YR9
STRING:Q93YR9 EnsemblPlants:AT4G30080.1 GeneID:829131
KEGG:ath:AT4G30080 GeneFarm:3406 TAIR:At4g30080 InParanoid:Q93YR9
OMA:GHAENAY PhylomeDB:Q93YR9 ProtClustDB:CLSN2917636
Genevestigator:Q93YR9 GermOnline:AT4G30080 Uniprot:Q93YR9
Length = 670
Score = 172 (65.6 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 47/139 (33%), Positives = 69/139 (49%)
Query: 182 IKHGEGDGA-ATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSGS 239
+ H GDG + F S+ + F K +T SD +P+ AE FP L +
Sbjct: 97 VDHEYGDGEDSNGFESN---SEKTPSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNA 153
Query: 240 TSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGD 299
+ +DV G VW+FR+ Y + + ++LT GWS FV +K L AGD + F R+ GD
Sbjct: 154 EPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGD 213
Query: 300 RQLYIDWKARTGPIENPVE 318
+ I +A+ G I N E
Sbjct: 214 LCVGIR-RAKRGGIGNGPE 231
>TAIR|locus:2032500 [details] [associations]
symbol:ERF11 "ERF domain protein 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0007154 "cell communication" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009863 "salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0009873 "ethylene mediated signaling
pathway" evidence=RCA;TAS] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0050832 "defense response
to fungus" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HOGENOM:HOG000237624 EMBL:AB055882 EMBL:AC010155
EMBL:AF360232 EMBL:AY040032 EMBL:AY086783 IPI:IPI00529285
PIR:B86410 RefSeq:NP_174159.1 UniGene:At.11834
ProteinModelPortal:Q9C5I3 SMR:Q9C5I3 STRING:Q9C5I3 PRIDE:Q9C5I3
EnsemblPlants:AT1G28370.1 GeneID:839733 KEGG:ath:AT1G28370
TAIR:At1g28370 eggNOG:NOG305458 InParanoid:Q9C5I3 OMA:RAIEFRG
PhylomeDB:Q9C5I3 ProtClustDB:CLSN2912737 Genevestigator:Q9C5I3
GermOnline:AT1G28370 Uniprot:Q9C5I3
Length = 166
Score = 148 (57.2 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 32/57 (56%), Positives = 39/57 (68%)
Query: 70 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
+Y+GV +P GR+ A+I + K RVWLGTF+ EEAARAYD A FRG A TNF
Sbjct: 19 RYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNF 75
>TAIR|locus:2145477 [details] [associations]
symbol:SHN3 "shine3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006950
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC006258
HOGENOM:HOG000237624 ProtClustDB:CLSN2692546 EMBL:AK118780
EMBL:BT005461 EMBL:BX834028 IPI:IPI00539200 IPI:IPI00541689
RefSeq:NP_197921.1 RefSeq:NP_851073.1 UniGene:At.19636
ProteinModelPortal:Q3E958 SMR:Q3E958 IntAct:Q3E958
EnsemblPlants:AT5G25390.2 GeneID:832611 KEGG:ath:AT5G25390
TAIR:At5g25390 eggNOG:NOG243679 InParanoid:Q3E958 OMA:LDNDSSH
PhylomeDB:Q3E958 Genevestigator:Q3E958 Uniprot:Q3E958
Length = 189
Score = 147 (56.8 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 40/95 (42%), Positives = 55/95 (57%)
Query: 68 SSKYKGVVPQPNGRWGAQIYEK--HQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFK 125
S K++GV + G W ++I +RVWLGTF+ E AARAYD AA G+ A TNF
Sbjct: 4 SKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFP 63
Query: 126 QISCAGTSSDDGDIEMAFLSSHSKSEIVDM-LRKH 159
I G++S + I A S S SE+++ LRK+
Sbjct: 64 VIKSNGSNSLE--INSALRSPKSLSELLNAKLRKN 96
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 171 (65.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 49/137 (35%), Positives = 67/137 (48%)
Query: 174 LDANGKRVIKHGEGDGAATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHF 233
L+ GK V + G G GS V K +F K +T SD +P++ AE F
Sbjct: 148 LNGEGKEVKELG---GEEERNGSSSV-KRTPHMFCKTLTASDTSTHGGFSVPRRAAEDCF 203
Query: 234 -PLQSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSF 292
PL L +D+ G W+FR+ Y + ++LT GWS FV +KNL +GD V F
Sbjct: 204 APLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLF 263
Query: 293 HRSTGGDRQLYIDWKAR 309
R GG+ +L I AR
Sbjct: 264 LRDEGGELRLGIRRAAR 280
>TAIR|locus:2089368 [details] [associations]
symbol:EBP "ethylene-responsive element binding protein"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity"
evidence=IEA;ISS;IDA;IMP;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0051707 "response to other
organism" evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0008219 "cell
death" evidence=IMP] [GO:0010286 "heat acclimation" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009753 "response
to jasmonic acid stimulus" evidence=IEP] [GO:0009873 "ethylene
mediated signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009735
GO:GO:0009753 GO:GO:0006950 GO:GO:0009873 GO:GO:0003677
GO:GO:0008219 GO:GO:0003700 GO:GO:0006351 GO:GO:0051707 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB022217
HOGENOM:HOG000237624 EMBL:Y09942 EMBL:Z37504 EMBL:AF003096
EMBL:AY059917 EMBL:AY035100 EMBL:AY142562 EMBL:AY087488
IPI:IPI00516463 RefSeq:NP_188299.1 UniGene:At.24773
ProteinModelPortal:P42736 SMR:P42736 IntAct:P42736 STRING:P42736
EnsemblPlants:AT3G16770.1 GeneID:820929 KEGG:ath:AT3G16770
TAIR:At3g16770 eggNOG:NOG300006 InParanoid:P42736 OMA:WSELDAS
PhylomeDB:P42736 ProtClustDB:CLSN2684019 Genevestigator:P42736
GermOnline:AT3G16770 Uniprot:P42736
Length = 248
Score = 159 (61.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 33/74 (44%), Positives = 45/74 (60%)
Query: 56 EAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQ 113
E E R+ + Y+G+ +P G+W A+I + K RVWLGTFN EEAA AYD+AA+
Sbjct: 64 EQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAK 123
Query: 114 RFRGRDAVTNFKQI 127
+ RG A NF +
Sbjct: 124 QIRGDKAKLNFPDL 137
>TAIR|locus:2148022 [details] [associations]
symbol:SHN2 "shine2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL360314 HOGENOM:HOG000237624
EMBL:AY560865 IPI:IPI00534793 RefSeq:NP_196680.1 UniGene:At.70314
ProteinModelPortal:Q9LFN7 SMR:Q9LFN7 PRIDE:Q9LFN7
EnsemblPlants:AT5G11190.1 GeneID:830989 KEGG:ath:AT5G11190
TAIR:At5g11190 eggNOG:NOG292617 InParanoid:Q9LFN7 OMA:DQLAMEM
PhylomeDB:Q9LFN7 ProtClustDB:CLSN2692546 Genevestigator:Q9LFN7
Uniprot:Q9LFN7
Length = 189
Score = 145 (56.1 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 50/168 (29%), Positives = 80/168 (47%)
Query: 68 SSKYKGVVPQPNGRWGAQIYEK--HQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFK 125
S K++GV + G W ++I +RVWLGTF E AARAYD AA G++A TNF
Sbjct: 4 SRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFP 63
Query: 126 QISCAGTSSDDGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHG 185
+ S D+ +S S SE+++ + + D L S LD + +
Sbjct: 64 VVKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKD-LTPSLTCLRLDTDSSHIGVWQ 122
Query: 186 EGDGAATAFGSDRVLKARDQLFEKAVTPSDVG--KLNRLVIPKQHAEK 231
+ G+ T+ L+ + + E AV D+G +N+ + K+ E+
Sbjct: 123 KRAGSKTSPTWVMRLELGNVVNESAV---DLGLTTMNKQNVEKEEEEE 167
>TAIR|locus:2008021 [details] [associations]
symbol:ERF3 "ethylene responsive element binding factor
3" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0010105
"negative regulation of ethylene mediated signaling pathway"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010105 EMBL:AC079279
HOGENOM:HOG000237624 EMBL:AB008105 EMBL:AC012561 EMBL:BT025295
EMBL:AK228091 IPI:IPI00534661 IPI:IPI00837459 PIR:T52011
RefSeq:NP_175479.1 UniGene:At.1645 UniGene:At.71718
ProteinModelPortal:O80339 SMR:O80339 IntAct:O80339 STRING:O80339
EnsemblPlants:AT1G50640.1 GeneID:841486 KEGG:ath:AT1G50640
TAIR:At1g50640 eggNOG:NOG251938 InParanoid:O80339 OMA:TKRYPRT
PhylomeDB:O80339 ProtClustDB:CLSN2682907 Genevestigator:O80339
GermOnline:AT1G50640 Uniprot:O80339
Length = 225
Score = 154 (59.3 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 38/84 (45%), Positives = 51/84 (60%)
Query: 43 RVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNE 100
R G G+S+V V A + + +++GV +P GR+ A+I + K RVWLGTF+
Sbjct: 2 RRGRGSSAVA--GPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDS 59
Query: 101 EEEAARAYDIAAQRFRGRDAVTNF 124
EEAARAYD AA+ RG A TNF
Sbjct: 60 AEEAARAYDSAARNLRGPKAKTNF 83
>TAIR|locus:2825329 [details] [associations]
symbol:AT1G71450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC016163 HOGENOM:HOG000237624
EMBL:BT010764 EMBL:BT011790 IPI:IPI00540458 RefSeq:NP_177301.1
UniGene:At.43565 UniGene:At.66830 ProteinModelPortal:Q9C9I2
SMR:Q9C9I2 EnsemblPlants:AT1G71450.1 GeneID:843486
KEGG:ath:AT1G71450 TAIR:At1g71450 eggNOG:NOG312881
InParanoid:Q9C9I2 OMA:DSIRMAV PhylomeDB:Q9C9I2
ProtClustDB:CLSN2914602 Genevestigator:Q9C9I2 Uniprot:Q9C9I2
Length = 183
Score = 141 (54.7 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 35/87 (40%), Positives = 52/87 (59%)
Query: 62 ESRKLPSSKYKGVVPQPNGRWGAQIYEK--HQRVWLGTFNEEEEAARAYDIAAQRFRGRD 119
+ + +PS+ Y+GV + G+W ++I E R+WLG+F E AA AYD+AA FRGR+
Sbjct: 16 DGKGVPSA-YRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGRE 74
Query: 120 AVTNFKQISCA----GTSSDDGDIEMA 142
A NF +++ + SS D I MA
Sbjct: 75 ARLNFPELASSLPRPADSSSDS-IRMA 100
>TAIR|locus:2092339 [details] [associations]
symbol:ERF7 "ethylene response factor 7" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0009737 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045892 GO:GO:0006952 GO:GO:0009873
GO:GO:0009414 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB024036
HOGENOM:HOG000237624 ProtClustDB:CLSN2682907 EMBL:AB032201
EMBL:AY037254 EMBL:AY094001 EMBL:AY085023 EMBL:AK228460
IPI:IPI00537654 RefSeq:NP_188666.1 UniGene:At.20161
ProteinModelPortal:Q9LDE4 SMR:Q9LDE4 IntAct:Q9LDE4 STRING:Q9LDE4
PaxDb:Q9LDE4 PRIDE:Q9LDE4 EnsemblPlants:AT3G20310.1 GeneID:821575
KEGG:ath:AT3G20310 TAIR:At3g20310 eggNOG:NOG322216
InParanoid:Q9LDE4 OMA:VAPEDCH PhylomeDB:Q9LDE4
Genevestigator:Q9LDE4 GermOnline:AT3G20310 Uniprot:Q9LDE4
Length = 244
Score = 154 (59.3 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 42/93 (45%), Positives = 55/93 (59%)
Query: 43 RVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNE 100
R G G SSV+ + S K P +Y+GV +P GR+ A+I + K RVWLGTF+
Sbjct: 2 RKGRG-SSVVGPALPVTAGGSVKEP--RYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDS 58
Query: 101 EEEAARAYDIAAQRFRGRDAVTNFKQISCAGTS 133
+AARAYD AA+ RG A TNF I C+ +S
Sbjct: 59 AVDAARAYDTAARNLRGPKAKTNFP-IDCSPSS 90
>TAIR|locus:2176095 [details] [associations]
symbol:ABR1 "ABA REPRESSOR1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0006970 "response to osmotic stress"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009749 "response to glucose stimulus"
evidence=IEP] [GO:0009788 "negative regulation of abscisic acid
mediated signaling pathway" evidence=IMP] [GO:0050832 "defense
response to fungus" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009738 GO:GO:0009873 GO:GO:0050832
GO:GO:0003677 GO:GO:0009749 GO:GO:0003700 GO:GO:0006351
GO:GO:0006970 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB025637
EMBL:AY140092 EMBL:BT008480 IPI:IPI00536757 RefSeq:NP_201280.1
UniGene:At.27199 UniGene:At.71233 HSSP:O80337
ProteinModelPortal:Q9FGF8 SMR:Q9FGF8 STRING:Q9FGF8
EnsemblPlants:AT5G64750.1 GeneID:836596 KEGG:ath:AT5G64750
TAIR:At5g64750 eggNOG:NOG310508 HOGENOM:HOG000006008
InParanoid:Q9FGF8 OMA:SYSEMAR PhylomeDB:Q9FGF8
ProtClustDB:CLSN2914923 Genevestigator:Q9FGF8 GO:GO:0009788
Uniprot:Q9FGF8
Length = 391
Score = 160 (61.4 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 33/62 (53%), Positives = 41/62 (66%)
Query: 67 PSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
P +Y+GV +P G+W A+I + K RVWLGTF+ E AARAYD AA RFRG A NF
Sbjct: 181 PRRRYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNF 240
Query: 125 KQ 126
+
Sbjct: 241 PE 242
>TAIR|locus:2088439 [details] [associations]
symbol:FUS3 "FUSCA 3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IGI;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IDA] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0010116 "positive regulation of abscisic acid
biosynthetic process" evidence=IMP] [GO:0010373 "negative
regulation of gibberellin biosynthetic process" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0003677 GO:GO:0008284 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AB016889 GO:GO:0010262 GO:GO:0010116 EMBL:AF016264
EMBL:AF016265 EMBL:AJ630497 EMBL:AY568669 IPI:IPI00540441
RefSeq:NP_566799.1 UniGene:At.6029 UniGene:At.66989 HSSP:Q9ZWM9
ProteinModelPortal:Q9LW31 SMR:Q9LW31 STRING:Q9LW31
EnsemblPlants:AT3G26790.1 GeneID:822293 KEGG:ath:AT3G26790
TAIR:At3g26790 eggNOG:NOG309510 HOGENOM:HOG000112670
InParanoid:O82411 OMA:GDFVNAH PhylomeDB:Q9LW31
ProtClustDB:CLSN2713723 Genevestigator:Q9LW31 GO:GO:0010373
Uniprot:Q9LW31
Length = 313
Score = 157 (60.3 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 39/120 (32%), Positives = 63/120 (52%)
Query: 206 LFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTG-KVWRFRYSYW- 263
LF+K + SDV L R+++PK+ AE H P +G+ + ED+ G VW F+Y YW
Sbjct: 91 LFQKELKNSDVSSLRRMILPKKAAEAHLPALE--CKEGIPIRMEDLDGFHVWTFKYRYWP 148
Query: 264 -NSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPIENPVEPVQM 322
N+S+ YVL + FV L+ GD + ++ + Y+ +AR E V+ + +
Sbjct: 149 NNNSRMYVL-ENTGDFVNAHGLQLGDFIMVYQDLYSNN--YVI-QARKASEEEEVDVINL 204
>TAIR|locus:2093166 [details] [associations]
symbol:ABI3 "AT3G24650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0009657 "plastid organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009790 "embryo
development" evidence=IEP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0031930 "mitochondria-nucleus signaling
pathway" evidence=IDA] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA] [GO:0016114 "terpenoid
biosynthetic process" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005829 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009733
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:X68141
EMBL:AJ002473 EMBL:AP000740 EMBL:AK220739 EMBL:AK220879
EMBL:AB253328 EMBL:EF597723 EMBL:EF597724 EMBL:EF597725
EMBL:EF597726 EMBL:EF597727 EMBL:EF597728 EMBL:EF597729
EMBL:EF597730 EMBL:EF597731 EMBL:EF597732 EMBL:EF597733
EMBL:EF597734 EMBL:EF597735 EMBL:EF597736 EMBL:EF597737
EMBL:EF597738 EMBL:EF597739 EMBL:EF597740 EMBL:EF597741
EMBL:EF597743 EMBL:EF597744 IPI:IPI00527803 PIR:JQ1676
RefSeq:NP_189108.1 UniGene:At.19959 ProteinModelPortal:Q01593
SMR:Q01593 IntAct:Q01593 STRING:Q01593 EnsemblPlants:AT3G24650.1
GeneID:822061 KEGG:ath:AT3G24650 TAIR:At3g24650 eggNOG:NOG318581
InParanoid:Q01593 OMA:VWNMRYR PhylomeDB:Q01593
ProtClustDB:CLSN2684517 Genevestigator:Q01593 GermOnline:AT3G24650
GO:GO:0009790 GO:GO:0031930 GO:GO:0009657 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Uniprot:Q01593
Length = 720
Score = 163 (62.4 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 40/117 (34%), Positives = 57/117 (48%)
Query: 206 LFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDV-TGKVWRFRYSYW- 263
L +K + SDVG L R+V+PK+ AE H P G+ L ED+ T +VW RY +W
Sbjct: 571 LLQKVLKQSDVGNLGRIVLPKKEAETHLP--ELEARDGISLAMEDIGTSRVWNMRYRFWP 628
Query: 264 -NSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPIENPVEP 319
N S+ Y+L + FVK L+ GD + + + L K R + P P
Sbjct: 629 NNKSRMYLL-ENTGDFVKTNGLQEGDFIVIYSDVKCGKYLIRGVKVRQPSGQKPEAP 684
>TAIR|locus:2183861 [details] [associations]
symbol:Rap2.6L "related to AP2 6l" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0009723 "response to ethylene stimulus" evidence=IEP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP]
[GO:0009751 "response to salicylic acid stimulus" evidence=IEP]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0071497 "cellular response to freezing"
evidence=IEP] [GO:0009407 "toxin catabolic process" evidence=RCA]
[GO:0010260 "organ senescence" evidence=RCA] [GO:0010583 "response
to cyclopentenone" evidence=RCA] [GO:0046482 "para-aminobenzoic
acid metabolic process" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0009753 GO:GO:0009873
GO:GO:0009723 GO:GO:0003677 GO:GO:0009651 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 GO:GO:0009751 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL163491 EMBL:AY560861
EMBL:BT011609 EMBL:BT012250 IPI:IPI00516288 PIR:T48580
RefSeq:NP_196837.1 UniGene:At.32083 UniGene:At.67565
UniGene:At.75194 ProteinModelPortal:Q9LYU3 SMR:Q9LYU3 IntAct:Q9LYU3
STRING:Q9LYU3 PaxDb:Q9LYU3 PRIDE:Q9LYU3 EnsemblPlants:AT5G13330.1
GeneID:831174 KEGG:ath:AT5G13330 TAIR:At5g13330 eggNOG:NOG270575
HOGENOM:HOG000112331 InParanoid:Q9LYU3 OMA:PRRRHYR PhylomeDB:Q9LYU3
ProtClustDB:CLSN2916600 Genevestigator:Q9LYU3 GO:GO:0071497
Uniprot:Q9LYU3
Length = 212
Score = 142 (55.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 30/58 (51%), Positives = 38/58 (65%)
Query: 71 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQ 126
Y+GV +P G+W A+I + K RVWLGTF EEAA AYD AA +F+G A NF +
Sbjct: 39 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPE 96
Score = 38 (18.4 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 145 SSHSKSEIVDMLRKHTYNDELEQSKRNYG 173
SS S S+ + + E+ ++NYG
Sbjct: 175 SSSSSSQQTQQQQLQQQQQQREEEEKNYG 203
>TAIR|locus:2158118 [details] [associations]
symbol:AT5G67000 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AB026640 HOGENOM:HOG000112333
ProtClustDB:CLSN2683315 EMBL:DQ145775 EMBL:AY560859 EMBL:BT024702
IPI:IPI00521061 RefSeq:NP_201501.2 UniGene:At.64325
UniGene:At.74244 ProteinModelPortal:Q38Q40 SMR:Q38Q40
EnsemblPlants:AT5G67000.1 GeneID:836835 KEGG:ath:AT5G67000
TAIR:At5g67000 eggNOG:euNOG11383 OMA:NDQNENF PhylomeDB:Q38Q40
Genevestigator:Q38Q40 Uniprot:Q38Q40
Length = 184
Score = 137 (53.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 36/93 (38%), Positives = 48/93 (51%)
Query: 33 PPTKSPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQ- 91
PP P LC V +G L E +K KYKGV +P+G+W A+I++
Sbjct: 89 PPDAGPCPLCGV-AGCYGCTLQRP---HREVKK--EKKYKGVRKKPSGKWAAEIWDPRSK 142
Query: 92 -RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTN 123
R WLGTF E AA++Y+ AA +R R TN
Sbjct: 143 SRRWLGTFLTAEMAAQSYNDAAAEYRARRGKTN 175
>TAIR|locus:2038927 [details] [associations]
symbol:AT2G20350 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC006569 EMBL:AY560881
EMBL:BT024698 IPI:IPI00533025 PIR:B84588 RefSeq:NP_179625.1
UniGene:At.50667 ProteinModelPortal:Q9SK67 SMR:Q9SK67
EnsemblPlants:AT2G20350.1 GeneID:816554 KEGG:ath:AT2G20350
TAIR:At2g20350 eggNOG:NOG253925 HOGENOM:HOG000112333 OMA:PPLNAGP
PhylomeDB:Q9SK67 ProtClustDB:CLSN2683315 Genevestigator:Q9SK67
Uniprot:Q9SK67
Length = 158
Score = 135 (52.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 36/92 (39%), Positives = 50/92 (54%)
Query: 30 ASIPPTKS-PESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYE 88
A +PP + P LC V V EA ++ E K+KGV +P+G+W A+I++
Sbjct: 51 ADLPPLNAGPCPLCSVTGCYGCVFPRHEAIIKKEK------KHKGVRKKPSGKWAAEIWD 104
Query: 89 KHQRV--WLGTFNEEEEAARAYDIAAQRFRGR 118
+V WLGTF E AA+AY+ AA F GR
Sbjct: 105 PSLKVRRWLGTFPTAEMAAKAYNDAAAEFVGR 136
>UNIPROTKB|Q5MFV3 [details] [associations]
symbol:BIERF1 "BTH-induced ERF transcriptional factor 1"
species:39946 "Oryza sativa Indica Group" [GO:0009620 "response to
fungus" evidence=IEP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009620 EMBL:AY831392
ProteinModelPortal:Q5MFV3 SMR:Q5MFV3 Gramene:Q5MFV3 Uniprot:Q5MFV3
Length = 399
Score = 155 (59.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 33/70 (47%), Positives = 45/70 (64%)
Query: 58 GVEAESRKLP-SSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQR 114
G A S K ++Y+G+ +P G+W A+I + K RVWLGT+N EEAARAYD A++
Sbjct: 125 GPTARSAKRKRKNQYRGIRQRPWGKWAAEIRDPSKGVRVWLGTYNTAEEAARAYDAEARK 184
Query: 115 FRGRDAVTNF 124
RG+ A NF
Sbjct: 185 IRGKKAKVNF 194
>TAIR|locus:2128429 [details] [associations]
symbol:CRF2 "AT4G23750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0042991 "transcription factor import into
nucleus" evidence=RCA;IDA] [GO:0048825 "cotyledon development"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048364 "root development" evidence=IEP] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0006606 "protein import into
nucleus" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
GO:GO:0009736 EMBL:AL161560 GO:GO:0048825 GO:GO:0042991
EMBL:AL035394 HOGENOM:HOG000237664 ProtClustDB:CLSN2685996
EMBL:AY057475 EMBL:AY140049 EMBL:BT015038 IPI:IPI00549106
PIR:T05607 RefSeq:NP_194106.1 RefSeq:NP_974599.1 UniGene:At.26323
UniGene:At.67317 ProteinModelPortal:Q9SUQ2 SMR:Q9SUQ2 IntAct:Q9SUQ2
EnsemblPlants:AT4G23750.1 EnsemblPlants:AT4G23750.2 GeneID:828475
KEGG:ath:AT4G23750 TAIR:At4g23750 eggNOG:NOG263971
InParanoid:Q9SUQ2 OMA:PRIKFTE PhylomeDB:Q9SUQ2
Genevestigator:Q9SUQ2 Uniprot:Q9SUQ2
Length = 343
Score = 153 (58.9 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 32/68 (47%), Positives = 43/68 (63%)
Query: 59 VEAESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFR 116
V A + K++GV +P G+W A+I + K R+WLGT+N EEAA YD AA + R
Sbjct: 110 VSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLR 169
Query: 117 GRDAVTNF 124
G DA+TNF
Sbjct: 170 GPDALTNF 177
>TAIR|locus:2154272 [details] [associations]
symbol:CRF3 "AT5G53290" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0042991 "transcription factor import into nucleus"
evidence=IDA] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048825 "cotyledon development" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0006606 "protein import into
nucleus" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736
GO:GO:0048366 EMBL:AB013388 GO:GO:0048825 GO:GO:0042991
HOGENOM:HOG000237664 EMBL:AY560878 EMBL:BT020244 EMBL:BT021136
IPI:IPI00543130 RefSeq:NP_200141.1 UniGene:At.49792
ProteinModelPortal:Q9FK12 SMR:Q9FK12 IntAct:Q9FK12 PRIDE:Q9FK12
EnsemblPlants:AT5G53290.1 GeneID:835410 KEGG:ath:AT5G53290
TAIR:At5g53290 eggNOG:NOG331684 InParanoid:Q9FK12 OMA:NEITVEP
PhylomeDB:Q9FK12 ProtClustDB:CLSN2686526 Genevestigator:Q9FK12
Uniprot:Q9FK12
Length = 354
Score = 153 (58.9 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 31/57 (54%), Positives = 40/57 (70%)
Query: 70 KYKGVVPQPNGRWGAQIY--EKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
K++GV +P G+W A+I E+ +R+WLGTF EEAA YD AA R RG DA+TNF
Sbjct: 124 KFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNF 180
>UNIPROTKB|Q6Z1Z3 [details] [associations]
symbol:IDEF1 "B3 domain-containing protein IDEF1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 EMBL:AP008214
EMBL:CM000145 EMBL:AP005406 EMBL:AK107456 EMBL:BR000654
RefSeq:NP_001060757.1 UniGene:Os.13809 STRING:Q6Z1Z3
EnsemblPlants:LOC_Os08g01090.1 GeneID:4344415
KEGG:dosa:Os08t0101000-01 KEGG:osa:4344415 Gramene:Q6Z1Z3
eggNOG:NOG307468 HOGENOM:HOG000070867 OMA:KFIIRGE
ProtClustDB:CLSN2695240 Uniprot:Q6Z1Z3
Length = 362
Score = 153 (58.9 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 51/174 (29%), Positives = 84/174 (48%)
Query: 149 KSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGAATAFGSDRVLKARDQ-LF 207
K EI+ + K + DELE RN ++ + + V E + + + Q +
Sbjct: 198 KPEILPRVVKSS--DELET--RNSNVEFHSETVGTLPESKQGHDSRATKLLNSGEYQVIL 253
Query: 208 EKAVTPSDVGKLNRLVIPKQHAEKHFP--LQSGSTSKGLLLNFEDVTGKV-WRFRYSYW- 263
K +T SDVG + R+V+PK+ AE P LQ L+L+ +D+ V W+F+Y YW
Sbjct: 254 RKELTKSDVGNVGRIVLPKKDAEASLPPLLQRDP----LILHMDDMVLPVTWKFKYRYWP 309
Query: 264 -NSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPIENP 316
N S+ Y+L F+K L+AGD++ +++ + + KA NP
Sbjct: 310 NNKSRMYILDSA-GEFLKTHGLQAGDVIIIYKNLAPGKFIIRGEKAIHQQTTNP 362
>TAIR|locus:505006142 [details] [associations]
symbol:CRF7 "AT1G22985" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AF000657 EMBL:AY062541 EMBL:AY093336 EMBL:AY087064
IPI:IPI00540393 RefSeq:NP_564186.1 UniGene:At.27304
ProteinModelPortal:Q8W4I5 SMR:Q8W4I5 IntAct:Q8W4I5
EnsemblPlants:AT1G22985.1 GeneID:838906 KEGG:ath:AT1G22985
TAIR:At1g22985 eggNOG:NOG242741 HOGENOM:HOG000112390
InParanoid:Q8W4I5 OMA:SDPPEVG PhylomeDB:Q8W4I5
ProtClustDB:CLSN2687921 Genevestigator:Q8W4I5 Uniprot:Q8W4I5
Length = 159
Score = 133 (51.9 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 32/76 (42%), Positives = 43/76 (56%)
Query: 70 KYKGVVPQPNGRWGAQIY-----EKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
K++GV +P G+W A+I + +R+WLGTF EEAA AYD AA + G DA TNF
Sbjct: 74 KFRGVRQRPWGKWAAEIRCGRVKGRPERIWLGTFETAEEAALAYDNAAIQLIGPDAPTNF 133
Query: 125 KQ--ISCAGTSSDDGD 138
+ + A D D
Sbjct: 134 GRPDVDSAVVKKQDSD 149
>TAIR|locus:2058641 [details] [associations]
symbol:DEAR3 "DREB and EAR motif protein 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC002391 HOGENOM:HOG000237624
EMBL:AK118495 EMBL:BT003741 IPI:IPI00528876 PIR:T00498
RefSeq:NP_179915.1 UniGene:At.43320 ProteinModelPortal:O22174
SMR:O22174 EnsemblPlants:AT2G23340.1 GeneID:816866
KEGG:ath:AT2G23340 TAIR:At2g23340 eggNOG:NOG273209
InParanoid:O22174 OMA:LPDPENS PhylomeDB:O22174
ProtClustDB:CLSN2683886 Genevestigator:O22174 Uniprot:O22174
Length = 176
Score = 133 (51.9 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 33/88 (37%), Positives = 47/88 (53%)
Query: 63 SRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDA 120
+RK YKG+ + G+W A+I E K R+WLG++ E AARAYD A RG A
Sbjct: 20 TRKRDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSA 79
Query: 121 VTNFKQISCAGTSSDDG----DIEMAFL 144
NF ++ T S+ G D+ A++
Sbjct: 80 RLNFPELLAGLTVSNGGGRGGDLSAAYI 107
>TAIR|locus:2132962 [details] [associations]
symbol:CRF4 "AT4G27950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0042991 "transcription factor import into nucleus"
evidence=IDA] [GO:0048366 "leaf development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
GO:GO:0009736 EMBL:AL161572 GO:GO:0048366 EMBL:AL035524
GO:GO:0042991 HOGENOM:HOG000237664 ProtClustDB:CLSN2686526
EMBL:BT033088 EMBL:AY560872 IPI:IPI00529666 PIR:T02896
RefSeq:NP_194524.2 UniGene:At.49716 ProteinModelPortal:Q9SUE3
SMR:Q9SUE3 IntAct:Q9SUE3 EnsemblPlants:AT4G27950.1 GeneID:828908
KEGG:ath:AT4G27950 TAIR:At4g27950 eggNOG:NOG284469
InParanoid:Q9SUE3 OMA:FLEPEQE Genevestigator:Q9SUE3 Uniprot:Q9SUE3
Length = 335
Score = 152 (58.6 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 31/57 (54%), Positives = 40/57 (70%)
Query: 70 KYKGVVPQPNGRWGAQIY--EKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
KY+GV +P G+W A+I E+ +R+WLGTF EEAA YD AA + RG DA+TNF
Sbjct: 117 KYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNF 173
>TAIR|locus:2129111 [details] [associations]
symbol:AT4G16750 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=ISS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:Z97341 EMBL:AL161544 HOGENOM:HOG000237624
ProtClustDB:CLSN2683800 EMBL:AY560874 EMBL:BT011576 EMBL:BT020592
IPI:IPI00533818 PIR:F85186 RefSeq:NP_193408.1 UniGene:At.33050
ProteinModelPortal:Q9SUK8 SMR:Q9SUK8 EnsemblPlants:AT4G16750.1
GeneID:827379 KEGG:ath:AT4G16750 TAIR:At4g16750 eggNOG:NOG310275
InParanoid:Q9SUK8 OMA:MQDSSSH PhylomeDB:Q9SUK8
Genevestigator:Q9SUK8 Uniprot:Q9SUK8
Length = 179
Score = 132 (51.5 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 37/102 (36%), Positives = 57/102 (55%)
Query: 46 SGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEE 103
+G SS + + GV K P+ ++GV + G+W ++I E K R+WLGTF+ E
Sbjct: 21 TGKSSKTKNEQKGVS----KQPN--FRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEM 74
Query: 104 AARAYDIAAQRFRGRDAVTNFKQISC---AGTSSDDGDIEMA 142
AARA+D+AA +G A NF +++ S+D DI+ A
Sbjct: 75 AARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEA 116
>UNIPROTKB|Q8VXC3 [details] [associations]
symbol:ebp-89 "Ethylene responsive protein" species:4530
"Oryza sativa" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
EMBL:AJ304840 ProteinModelPortal:Q8VXC3 SMR:Q8VXC3
KEGG:dosa:Os03t0182800-01 Gramene:Q8VXC3 Genevestigator:Q8VXC3
Uniprot:Q8VXC3
Length = 326
Score = 151 (58.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 31 SIPPTKSPESLCRVGSGASSVILDSEAGVEAESRKLPS--SKYKGVVPQPNGRWGAQIYE 88
S P +K+ S +SS A R+ S SKY+GV +P+GR+ A+I +
Sbjct: 80 SSPKSKAVPSFSFSSDVSSSSRPRRRVAAAAAGRRKASKKSKYRGVRLRPSGRFAAEIRD 139
Query: 89 --KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
K +RVWLGT+ EEAA AYD A+R RG+ A NF
Sbjct: 140 PKKGRRVWLGTYGSAEEAAMAYDREARRIRGKGARLNF 177
>UNIPROTKB|Q7XKC5 [details] [associations]
symbol:LOC_Os04g58000 "B3 domain-containing protein
Os04g0676600" species:39947 "Oryza sativa Japonica Group"
[GO:0003677 "DNA binding" evidence=IDA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AP008210 EMBL:CM000141
HSSP:Q9ZWM9 ProtClustDB:CLSN2695240 EMBL:AL606668 EMBL:AK072874
EMBL:BR000655 RefSeq:NP_001054257.1 UniGene:Os.53477 PRIDE:Q7XKC5
EnsemblPlants:LOC_Os04g58000.1 GeneID:4337398 KEGG:osa:4337398
Gramene:Q7XKC5 eggNOG:NOG257628 HOGENOM:HOG000241121 OMA:HEKESGA
Uniprot:Q7XKC5
Length = 433
Score = 153 (58.9 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 34/98 (34%), Positives = 56/98 (57%)
Query: 206 LFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKV-WRFRYSYW- 263
+ K +T SDVG + R+V+PK+ AE H P +G++L +D + W F+Y +W
Sbjct: 296 ILRKELTNSDVGNIGRIVMPKRDAEAHLPALH--QREGVMLKMDDFKLETTWNFKYRFWP 353
Query: 264 -NSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDR 300
N S+ YVL + FVK+ L+ GDI ++S+ ++
Sbjct: 354 NNKSRMYVL-ESTGGFVKQHVLQTGDIFIIYKSSESEK 390
>TAIR|locus:2057517 [details] [associations]
symbol:ARF10 "auxin response factor 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0048829 "root cap
development" evidence=IGI;IMP] [GO:0051301 "cell division"
evidence=IGI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009743 "response to carbohydrate
stimulus" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048589 "developmental growth"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009734 GO:GO:0051301 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0048589 GO:GO:0009743
GO:GO:0048441 GO:GO:0048442 GO:GO:0010154 GO:GO:0035198
GO:GO:0048366 GO:GO:0007389 EMBL:AF099735 EMBL:AC006283
EMBL:AF325073 EMBL:AF336919 EMBL:EU550097 EMBL:EU550098
EMBL:EU550099 EMBL:EU550100 EMBL:EU550101 EMBL:EU550102
EMBL:EU550103 EMBL:EU550104 EMBL:EU550105 EMBL:EU550106
EMBL:EU550107 EMBL:EU550108 EMBL:EU550109 EMBL:EU550110
EMBL:EU550111 EMBL:EU550112 EMBL:EU550113 EMBL:EU550114
EMBL:EU550115 EMBL:EU550116 EMBL:EU550117 EMBL:EU550118
EMBL:EU550119 EMBL:AK228534 IPI:IPI00530405 PIR:G84683
RefSeq:NP_180402.1 UniGene:At.13730 ProteinModelPortal:Q9SKN5
SMR:Q9SKN5 IntAct:Q9SKN5 STRING:Q9SKN5 PRIDE:Q9SKN5
EnsemblPlants:AT2G28350.1 GeneID:817382 KEGG:ath:AT2G28350
GeneFarm:3383 TAIR:At2g28350 eggNOG:NOG315592 InParanoid:Q9SKN5
OMA:ERESGRC PhylomeDB:Q9SKN5 ProtClustDB:CLSN2913131
ArrayExpress:Q9SKN5 Genevestigator:Q9SKN5 GermOnline:AT2G28350
GO:GO:0031540 Uniprot:Q9SKN5
Length = 693
Score = 156 (60.0 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 35/100 (35%), Positives = 52/100 (52%)
Query: 201 KARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGL-LLNFEDVTGKVWRFR 259
K + F K +T SD +P+ AE FP S + + +D+ G+ W+FR
Sbjct: 109 KEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFR 168
Query: 260 YSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGD 299
+ Y + + ++LT GWS FV +K L AGD + F RS GD
Sbjct: 169 HIYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGD 208
>TAIR|locus:2032170 [details] [associations]
symbol:LEC2 "LEAFY COTYLEDON 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0010344 "seed
oilbody biogenesis" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010601 "positive regulation of auxin
biosynthetic process" evidence=IMP] InterPro:IPR003340 Pfam:PF02362
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010262 GO:GO:0010431 EMBL:AC021044
EMBL:AF400123 EMBL:AF400124 EMBL:AJ630496 EMBL:AY568668
EMBL:DQ446296 EMBL:DQ652865 IPI:IPI00516936 PIR:C86409
RefSeq:NP_564304.1 UniGene:At.26290 ProteinModelPortal:Q1PFR7
SMR:Q1PFR7 STRING:Q1PFR7 EnsemblPlants:AT1G28300.1 GeneID:839724
KEGG:ath:AT1G28300 TAIR:At1g28300 eggNOG:NOG295110
HOGENOM:HOG000113311 OMA:NEGRENE PhylomeDB:Q1PFR7
ProtClustDB:CLSN2688053 Genevestigator:Q1PFR7 GO:GO:0010601
GO:GO:0010344 Uniprot:Q1PFR7
Length = 363
Score = 151 (58.2 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 36/109 (33%), Positives = 57/109 (52%)
Query: 206 LFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTG-KVWRFRYSYW- 263
L EK + SDVG L R+V+PK+ AE + P S +G+++ DV + W F+Y +W
Sbjct: 170 LCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDK--EGIVVQMRDVFSMQSWSFKYKFWS 227
Query: 264 -NSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTG 311
N S+ YVL + FVK+ + GD ++ + + LY +G
Sbjct: 228 NNKSRMYVL-ENTGEFVKQNGAEIGDFLTIYEDES--KNLYFAMNGNSG 273
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 154 (59.3 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 40/120 (33%), Positives = 61/120 (50%)
Query: 207 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYWNSS 266
F K +T SD +PK+HA + P ++ LL +D+ G WRFR+SY +
Sbjct: 126 FTKVLTASDTSAYGGFFVPKKHAIECLP-PLPLPAQELLA--KDLHGNQWRFRHSYRGTP 182
Query: 267 QSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKAR--TGPIENPVEPVQMMR 324
Q + LT GW+ F K L GD++ F R G+ ++ I +AR G I + + + MR
Sbjct: 183 QRHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIR-RARHQQGNIPSSIVSIDCMR 241
>TAIR|locus:2074765 [details] [associations]
symbol:CEJ1 "cooperatively regulated by ethylene and
jasmonate 1" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009617 "response to bacterium"
evidence=IEP] [GO:0010941 "regulation of cell death" evidence=IMP]
[GO:0042742 "defense response to bacterium" evidence=IMP]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0009414 "response to water deprivation"
evidence=RCA] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0010941 GO:GO:0009873
GO:GO:0003677 GO:GO:0009409 GO:GO:0042742 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200
HSSP:O80337 EMBL:AL132976 HOGENOM:HOG000237624
ProtClustDB:CLSN2914757 EMBL:AY045579 EMBL:AY093792 IPI:IPI00543652
PIR:T45572 RefSeq:NP_190595.1 UniGene:At.1423
ProteinModelPortal:Q9SNE1 SMR:Q9SNE1 STRING:Q9SNE1
EnsemblPlants:AT3G50260.1 GeneID:824188 KEGG:ath:AT3G50260
TAIR:At3g50260 eggNOG:NOG306351 InParanoid:Q9SNE1 OMA:PELLPCT
PhylomeDB:Q9SNE1 Genevestigator:Q9SNE1 Uniprot:Q9SNE1
Length = 153
Score = 130 (50.8 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 33/89 (37%), Positives = 53/89 (59%)
Query: 53 LDSEAGVEAE-SRKLPSSK-YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAY 108
+D+ V+A+ + K+ + +KG+ + G+W A+I E K R+WLG+++ E AARAY
Sbjct: 1 MDAGVAVKADVAVKMKRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAY 60
Query: 109 DIAAQRFRGRDAVTNFKQI-SCAGTSSDD 136
D A RG A NF ++ C TS++D
Sbjct: 61 DTAVFYLRGPTATLNFPELLPC--TSAED 87
>TAIR|locus:2116224 [details] [associations]
symbol:RRTF1 "redox responsive transcription factor 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0050832 "defense
response to fungus" evidence=IEP] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] [GO:0035556 "intracellular
signal transduction" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0050832 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200
HSSP:O80337 EMBL:AL035521 EMBL:AL161585 EMBL:AY064151 EMBL:AY120700
EMBL:AF325091 IPI:IPI00529364 PIR:T04787 RefSeq:NP_195167.1
UniGene:At.48936 UniGene:At.66607 ProteinModelPortal:Q9SZ06
SMR:Q9SZ06 STRING:Q9SZ06 EnsemblPlants:AT4G34410.1 GeneID:829591
KEGG:ath:AT4G34410 TAIR:At4g34410 eggNOG:NOG290278
HOGENOM:HOG000243182 InParanoid:Q9SZ06 OMA:GNTIADM PhylomeDB:Q9SZ06
ProtClustDB:CLSN2718216 Genevestigator:Q9SZ06 Uniprot:Q9SZ06
Length = 268
Score = 146 (56.5 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 35/79 (44%), Positives = 47/79 (59%)
Query: 48 ASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFNEEEEAA 105
+S V +E G + RK + Y+GV +P G++ A+I + + RVWLGTF E+AA
Sbjct: 113 SSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAA 172
Query: 106 RAYDIAAQRFRGRDAVTNF 124
RAYD AA FRG A NF
Sbjct: 173 RAYDRAAIGFRGPRAKLNF 191
>TAIR|locus:2086213 [details] [associations]
symbol:TDR1 "Transcriptional Regulator of Defense
Response 1" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0009873 "ethylene
mediated signaling pathway" evidence=RCA;TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 HSSP:O80337
EMBL:AB025608 HOGENOM:HOG000237624 EMBL:AJ580377 IPI:IPI00538070
RefSeq:NP_188964.2 UniGene:At.37741 ProteinModelPortal:Q9LTC5
SMR:Q9LTC5 STRING:Q9LTC5 EnsemblPlants:AT3G23230.1 GeneID:821901
KEGG:ath:AT3G23230 TAIR:At3g23230 eggNOG:NOG239208
InParanoid:Q9LTC5 OMA:DKQARFR PhylomeDB:Q9LTC5
ProtClustDB:CLSN2918542 Genevestigator:Q9LTC5 Uniprot:Q9LTC5
Length = 139
Score = 129 (50.5 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 34/92 (36%), Positives = 50/92 (54%)
Query: 62 ESRKLPSSKYKGVVPQPNGRWGAQIYEKHQ---RVWLGTFNEEEEAARAYDIAAQRFRGR 118
+S+ ++++GV +P G++ A+I + + R+WLGTF EEAARAYD AA RG
Sbjct: 11 QSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGH 70
Query: 119 DAVTNFKQISCAGTSSDDGDIEMAFLSSHSKS 150
A+ NF DD + + SS S S
Sbjct: 71 LAILNFPNEYYP--RMDDYSLRPPYASSSSSS 100
>TAIR|locus:2155498 [details] [associations]
symbol:DEAR2 "DREB and EAR motif protein 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB020742 HOGENOM:HOG000237624
EMBL:AY560860 EMBL:DQ447114 EMBL:DQ653394 EMBL:BT025744
IPI:IPI00524496 RefSeq:NP_201520.1 UniGene:At.50633
ProteinModelPortal:Q9FH94 SMR:Q9FH94 EnsemblPlants:AT5G67190.1
GeneID:836854 KEGG:ath:AT5G67190 TAIR:At5g67190 eggNOG:NOG289312
InParanoid:Q9FH94 OMA:DEEWESK PhylomeDB:Q9FH94
ProtClustDB:CLSN2914757 Genevestigator:Q9FH94 Uniprot:Q9FH94
Length = 184
Score = 133 (51.9 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 47/157 (29%), Positives = 75/157 (47%)
Query: 71 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQIS 128
YKG+ + G+W A+I E K R+WLG+++ E AARAYD A RG A NF ++
Sbjct: 21 YKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFPEL- 79
Query: 129 CAGTSSDDGDIEMAFLSSHSKSEI---VDMLRKHTYNDELEQSKRNYGLDANGK---RVI 182
G D D+ A + + +E+ VD L N+ +N D + K R
Sbjct: 80 LPGEKFSDEDMSAATIRKKA-TEVGAQVDALGTAVQNNRHRVFGQNRDSDVDNKNFHRNY 138
Query: 183 KHGEGDGAATAFGSDRVLKARDQLFEKAVTPSDVGKL 219
++GE + D+ L++ +L ++ D+ KL
Sbjct: 139 QNGEREEEEED-EDDKRLRSGGRLLDRV----DLNKL 170
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 39/121 (32%), Positives = 59/121 (48%)
Query: 207 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSGSTSKGLLLNFEDVTGKVWRFRYSYWNS 265
F K +T SD +PK+HA + P L L D+ G WRF ++Y +
Sbjct: 126 FTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGT 185
Query: 266 SQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKAR--TGPIENPVEPVQMM 323
Q ++LT GW+ F K L AGD++ F R G+ ++ I +AR G I + + + M
Sbjct: 186 PQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIR-RARHQQGNIPSSIVSIDCM 244
Query: 324 R 324
R
Sbjct: 245 R 245
>TAIR|locus:2010346 [details] [associations]
symbol:AT1G12890 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC012187 EMBL:AB493454 IPI:IPI00523616
RefSeq:NP_172749.1 UniGene:At.51591 ProteinModelPortal:Q3E703
SMR:Q3E703 EnsemblPlants:AT1G12890.1 GeneID:837847
KEGG:ath:AT1G12890 TAIR:At1g12890 eggNOG:NOG258941
HOGENOM:HOG000215011 InParanoid:Q3E703 OMA:YTENTSL
ProtClustDB:CLSN2914226 Genevestigator:Q3E703 Uniprot:Q3E703
Length = 219
Score = 141 (54.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 32/65 (49%), Positives = 40/65 (61%)
Query: 62 ESRKLPSSKYKGVVPQPNGRWGAQIYEKH--QRVWLGTFNEEEEAARAYDIAAQRFRGRD 119
E +KL KY GV +P GR+ A+I +R WLGTF+ EEAA AYD+AA+ G
Sbjct: 12 EEKKLQEGKYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAAFAYDVAARSISGSL 71
Query: 120 AVTNF 124
A TNF
Sbjct: 72 ATTNF 76
>TAIR|locus:2032510 [details] [associations]
symbol:ERF12 "ERF domain protein 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HOGENOM:HOG000237624 EMBL:AC010155 EMBL:AB055883
EMBL:AY099798 EMBL:BT002604 IPI:IPI00525007 RefSeq:NP_174158.1
UniGene:At.40906 ProteinModelPortal:Q94ID6 SMR:Q94ID6 IntAct:Q94ID6
STRING:Q94ID6 EnsemblPlants:AT1G28360.1 GeneID:839732
KEGG:ath:AT1G28360 TAIR:At1g28360 eggNOG:NOG295943
InParanoid:Q94ID6 OMA:CAREVHY PhylomeDB:Q94ID6
ProtClustDB:CLSN2679392 Genevestigator:Q94ID6 GermOnline:AT1G28360
Uniprot:Q94ID6
Length = 189
Score = 135 (52.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 71 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
Y+GV +P GR+ A+I + K RVWLGTF+ EEAA AYD AA+ RG A TNF
Sbjct: 12 YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNF 67
>TAIR|locus:2151576 [details] [associations]
symbol:AT5G61590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IEP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB012239 HOGENOM:HOG000272710
EMBL:AY045968 EMBL:AY079321 EMBL:AY085939 IPI:IPI00538118
RefSeq:NP_200967.1 UniGene:At.24138 ProteinModelPortal:Q9FKG2
SMR:Q9FKG2 STRING:Q9FKG2 EnsemblPlants:AT5G61590.1 GeneID:836280
KEGG:ath:AT5G61590 TAIR:At5g61590 eggNOG:NOG268094
InParanoid:Q9FKG2 OMA:TSPEVET PhylomeDB:Q9FKG2
ProtClustDB:CLSN2686928 Genevestigator:Q9FKG2 Uniprot:Q9FKG2
Length = 201
Score = 138 (53.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 71 YKGVVPQPNGRWGAQIYE---KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
Y+GV +P G++ A+I + K R+WLGTF + +AARAYD AA + RGR AV NF
Sbjct: 107 YRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNF 163
>TAIR|locus:2057609 [details] [associations]
symbol:ETT "ETTIN" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0009850 "auxin
metabolic process" evidence=TAS] [GO:0010158 "abaxial cell fate
specification" evidence=IGI] [GO:0010050 "vegetative phase change"
evidence=IGI;RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=ISS] InterPro:IPR003340
InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009733 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009850 GO:GO:0010050 HOGENOM:HOG000241141
KO:K14486 EMBL:U89296 EMBL:AF007788 EMBL:U78721 EMBL:AF336917
EMBL:AF360313 EMBL:AY056365 EMBL:AB199791 IPI:IPI00527337
PIR:E84750 PIR:T03278 RefSeq:NP_180942.1 UniGene:At.10360
ProteinModelPortal:O23661 SMR:O23661 IntAct:O23661 STRING:O23661
EnsemblPlants:AT2G33860.1 GeneID:817956 KEGG:ath:AT2G33860
GeneFarm:3366 TAIR:At2g33860 eggNOG:NOG315820 InParanoid:O23661
OMA:HESNNES PhylomeDB:O23661 ProtClustDB:CLSN2913114
Genevestigator:O23661 GermOnline:AT2G33860 GO:GO:0010158
Uniprot:O23661
Length = 608
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 50/165 (30%), Positives = 73/165 (44%)
Query: 144 LSSHSKSEIVDM-LRKHTYNDELEQSKRNYGLDANGKRVIKHG--EGDGAATAFGSDRVL 200
L H I+D+ L T DE+ + +R ++ G + DG + VL
Sbjct: 94 LPPHVFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDY---EVL 150
Query: 201 KARD--QLFEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSGSTSKGLLLNFEDVTGKVWR 257
K + +F K +T SD +P++ AE FP L L D+ G WR
Sbjct: 151 KRSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWR 210
Query: 258 FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQL 302
FR+ Y + ++LT GWS FV +K L +GD V F R G +L
Sbjct: 211 FRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRL 255
>TAIR|locus:2183174 [details] [associations]
symbol:RAP2.11 "related to AP2 11" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0000302 "response to reactive
oxygen species" evidence=IEP] [GO:0009723 "response to ethylene
stimulus" evidence=IEP] [GO:0035865 "cellular response to potassium
ion" evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0048528 "post-embryonic root development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0009723 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0000302 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0035865
EMBL:AF296838 GO:GO:0048528 EMBL:AF003104 EMBL:AY560854
IPI:IPI00543417 RefSeq:NP_197480.1 UniGene:At.49039
UniGene:At.71012 ProteinModelPortal:Q6J9S1 SMR:Q6J9S1 STRING:Q6J9S1
EnsemblPlants:AT5G19790.1 GeneID:832099 KEGG:ath:AT5G19790
TAIR:At5g19790 eggNOG:NOG268154 HOGENOM:HOG000242199
InParanoid:Q6J9S1 OMA:IERQISA PhylomeDB:Q6J9S1
ProtClustDB:CLSN2713867 Genevestigator:Q6J9S1 Uniprot:Q6J9S1
Length = 253
Score = 143 (55.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 32/65 (49%), Positives = 41/65 (63%)
Query: 62 ESRKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFNEEEEAARAYDIAAQRFRGRD 119
E K +K+ GV +P+G+W A+I + Q R+WLGTF EEAARAYD AA RG +
Sbjct: 13 EKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSN 72
Query: 120 AVTNF 124
TNF
Sbjct: 73 TRTNF 77
>UNIPROTKB|Q5MFV0 [details] [associations]
symbol:BIERF4 "BTH-induced ERF transcriptional factor 4"
species:39946 "Oryza sativa Indica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IC] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AY831395 ProteinModelPortal:Q5MFV0
KEGG:dosa:Os03t0183300-01 Gramene:Q5MFV0 Uniprot:Q5MFV0
Length = 329
Score = 146 (56.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 34/79 (43%), Positives = 45/79 (56%)
Query: 56 EAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQ 113
+A A SR+ ++Y+GV +P G+W A+I + K RVWLGTF E AA AYD AA+
Sbjct: 82 KAAAAASSRRRKPAQYRGVRRRPWGKWAAEIRDPVKGIRVWLGTFTNAEAAALAYDDAAR 141
Query: 114 RFRGRDAVTNFKQISCAGT 132
RG A NF + T
Sbjct: 142 AIRGDRAKLNFPSATTPDT 160
>TAIR|locus:2035257 [details] [associations]
symbol:AT1G01250 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009414 "response to water deprivation" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC023628 HOGENOM:HOG000237624 EMBL:BT025752
EMBL:AY086507 IPI:IPI00535297 PIR:G86142 RefSeq:NP_563624.1
UniGene:At.42657 ProteinModelPortal:Q1ECI2 SMR:Q1ECI2
EnsemblPlants:AT1G01250.1 GeneID:839322 KEGG:ath:AT1G01250
GeneFarm:2900 TAIR:At1g01250 eggNOG:NOG259440 InParanoid:Q1ECI2
OMA:FWEGIEL PhylomeDB:Q1ECI2 ProtClustDB:CLSN2687605
Genevestigator:Q1ECI2 Uniprot:Q1ECI2
Length = 192
Score = 128 (50.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 44/136 (32%), Positives = 63/136 (46%)
Query: 25 PITFPASIPPTKSPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGA 84
P S PP + E AS+V G E S Y GV + G+W +
Sbjct: 3 PQRMKLSSPPVTNNEPTAT----ASAVKSCGGGGKETSSSTTRHPVYHGVRKRRWGKWVS 58
Query: 85 QIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF-KQISCAGTSSD--DGDI 139
+I E K R+WLG+F E AA+AYD+AA +GR A NF ++I S DI
Sbjct: 59 EIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEEIEDLPRPSTCTPRDI 118
Query: 140 EMAFLSSHSKSEIVDM 155
++A + + +I+ M
Sbjct: 119 QVAAAKAANAVKIIKM 134
Score = 40 (19.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 176 ANGKRVIKHGEGDGAATAFGSD 197
AN ++IK G+ D A G D
Sbjct: 126 ANAVKIIKMGDDDVAGIDDGDD 147
>TAIR|locus:2086223 [details] [associations]
symbol:ERF1 "ethylene response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0006952
"defense response" evidence=IMP] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=TAS] [GO:0009873 "ethylene
mediated signaling pathway" evidence=IGI;TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006952 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB025608
GO:GO:0009867 HOGENOM:HOG000237624 EMBL:AF076277 EMBL:AF076278
EMBL:AF428390 EMBL:AY133629 EMBL:AY086078 IPI:IPI00537111
RefSeq:NP_188965.1 UniGene:At.6341 UniGene:At.74125
ProteinModelPortal:Q8LDC8 SMR:Q8LDC8 PaxDb:Q8LDC8 PRIDE:Q8LDC8
EnsemblPlants:AT3G23240.1 GeneID:821902 KEGG:ath:AT3G23240
GeneFarm:4728 TAIR:At3g23240 eggNOG:NOG331104 InParanoid:Q8LDC8
KO:K14516 OMA:NDSEEMF PhylomeDB:Q8LDC8 ProtClustDB:CLSN2914712
Genevestigator:Q8LDC8 GermOnline:AT3G23240 Uniprot:Q8LDC8
Length = 218
Score = 139 (54.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 40/110 (36%), Positives = 55/110 (50%)
Query: 63 SRKLPSSKYKGVVPQPNGRWGAQIYEKHQ---RVWLGTFNEEEEAARAYDIAAQRFRGRD 119
SRK S Y+GV +P G++ A+I + + RVWLGTF EEAA AYD AA RG
Sbjct: 75 SRKSEKS-YRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSS 133
Query: 120 AVTNFKQISCAGTSSDDGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSK 169
A+ NF + S E+ + S +V + RKH+ + K
Sbjct: 134 AILNFSAERVQESLS-----EIKYTYEDGCSPVVALKRKHSMRRRMTNKK 178
>TAIR|locus:2029436 [details] [associations]
symbol:ARF17 "auxin response factor 17" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=TAS] [GO:0048830 "adventitious root development"
evidence=IMP] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR003340 InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0048830 GO:GO:0009653
EMBL:AC009243 EMBL:AC012193 EMBL:AY056184 EMBL:BT002749
EMBL:EU550144 EMBL:EU550145 EMBL:EU550146 EMBL:EU550147
EMBL:EU550148 EMBL:EU550149 EMBL:EU550150 EMBL:EU550151
EMBL:EU550152 EMBL:EU550153 EMBL:EU550154 EMBL:EU550155
EMBL:EU550156 EMBL:EU550157 EMBL:EU550158 EMBL:EU550159
EMBL:EU550160 EMBL:EU550161 EMBL:EU550162 EMBL:EU550163
EMBL:EU550164 EMBL:EU550165 EMBL:EU550166 EMBL:EU550167
IPI:IPI00522722 PIR:D96808 RefSeq:NP_565161.1 UniGene:At.26363
ProteinModelPortal:Q84WU6 SMR:Q84WU6 IntAct:Q84WU6 STRING:Q84WU6
PRIDE:Q84WU6 EnsemblPlants:AT1G77850.1 GeneID:844120
KEGG:ath:AT1G77850 GeneFarm:3413 TAIR:At1g77850 eggNOG:NOG325741
OMA:IWRACAG PhylomeDB:Q84WU6 ProtClustDB:CLSN2689276
Genevestigator:Q84WU6 GermOnline:AT1G77850 Uniprot:Q84WU6
Length = 585
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 34/94 (36%), Positives = 49/94 (52%)
Query: 207 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLL-LNFEDVTGKVWRFRYSYWNS 265
F K +TPSD +P+ A+ FPL + + L D+ G VW FR+ Y +
Sbjct: 119 FAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGT 178
Query: 266 SQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGD 299
+ ++LT GWS+FV K L AGD V F R + +
Sbjct: 179 PRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADE 212
>UNIPROTKB|P37398 [details] [associations]
symbol:VP1 "B3 domain-containing protein VP1" species:39947
"Oryza sativa Japonica Group" [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0009790 "embryo development"
evidence=IEP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0009737 GO:GO:0005634 GO:GO:0009738
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 eggNOG:NOG318581
OMA:VWNMRYR ProtClustDB:CLSN2684517 GO:GO:0009790
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AP008207 EMBL:D16640 EMBL:AP003436 EMBL:AK073805 EMBL:AK105441
RefSeq:NP_001045162.2 UniGene:Os.7360 ProteinModelPortal:P37398
STRING:P37398 PRIDE:P37398 EnsemblPlants:LOC_Os01g68370.1
GeneID:4324314 KEGG:osa:4324314 Gramene:P37398 HOGENOM:HOG000238595
Uniprot:P37398
Length = 727
Score = 150 (57.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 37/107 (34%), Positives = 55/107 (51%)
Query: 206 LFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDV-TGKVWRFRYSYW- 263
L +K + SDVG L R+V+PK+ AE H P T G+ + ED+ T +VW RY +W
Sbjct: 536 LLQKVLKQSDVGSLGRIVLPKE-AEVHLP--ELKTRDGVSIPMEDIGTSQVWNMRYRFWP 592
Query: 264 -NSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKAR 309
N S+ Y+L + FV+ L+ GD + + + L K R
Sbjct: 593 NNKSRMYLL-ENTGDFVRSNELQEGDFIVIYSDIKSGKYLIRGVKVR 638
>TAIR|locus:2008216 [details] [associations]
symbol:PLT2 "PLETHORA 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007389 "pattern specification process"
evidence=IMP] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0048364 "root development" evidence=IGI;IMP] [GO:0051302
"regulation of cell division" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048364 Gene3D:3.30.730.10 SUPFAM:SSF54171
HOGENOM:HOG000239258 KO:K09285 GO:GO:0007389 GO:GO:0019827
eggNOG:NOG311645 GO:GO:0051302 EMBL:AC006085
ProtClustDB:CLSN2680750 EMBL:AY506550 EMBL:AY585681 EMBL:BT020277
EMBL:BT020460 IPI:IPI00543980 PIR:F96549 RefSeq:NP_175530.2
UniGene:At.49968 ProteinModelPortal:Q5YGP7 SMR:Q5YGP7 IntAct:Q5YGP7
STRING:Q5YGP7 EnsemblPlants:AT1G51190.1 GeneID:841542
KEGG:ath:AT1G51190 TAIR:At1g51190 InParanoid:Q5YGP7 OMA:CASNAPN
PhylomeDB:Q5YGP7 Genevestigator:Q5YGP7 Uniprot:Q5YGP7
Length = 568
Score = 148 (57.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 45/135 (33%), Positives = 73/135 (54%)
Query: 68 SSKYKGVVPQ-PNGRWGAQI--YEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
+S Y+GV +GRW A+I ++ ++LGTF+ EEEAA AYDIAA +FRG +AVTNF
Sbjct: 290 ASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNF 349
Query: 125 KQISCAGTSSDDGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKH 184
+ + D++ A L S++ ++ LE S++ + A G ++
Sbjct: 350 E--------INRYDVK-AILESNTLPIGGGAAKRLKEAQALESSRKREEMIALGSNFHQY 400
Query: 185 GEGDGAATAFGSDRV 199
G G+++ S R+
Sbjct: 401 GAASGSSSVASSSRL 415
>TAIR|locus:2037698 [details] [associations]
symbol:SHN1 "SHINE 1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0010166 "wax metabolic process" evidence=IMP]
[GO:0010143 "cutin biosynthetic process" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IPI] [GO:0009873 "ethylene
mediated signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009873 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC007591 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 GO:GO:0010143 HOGENOM:HOG000237624
ProtClustDB:CLSN2692546 EMBL:AY378101 EMBL:AK117941 EMBL:BT005220
EMBL:AY085720 IPI:IPI00534091 PIR:B86288 RefSeq:NP_172988.1
UniGene:At.11422 ProteinModelPortal:Q9XI33 SMR:Q9XI33 STRING:Q9XI33
EnsemblPlants:AT1G15360.1 GeneID:838105 KEGG:ath:AT1G15360
TAIR:At1g15360 eggNOG:NOG290838 InParanoid:Q9XI33 OMA:DTASSHI
Genevestigator:Q9XI33 GO:GO:0010166 Uniprot:Q9XI33
Length = 199
Score = 135 (52.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 36/87 (41%), Positives = 46/87 (52%)
Query: 68 SSKYKGVVPQPNGRWGAQIYEK--HQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF- 124
+ K++GV + G W A+I +R+WLGTF EEAARAYD AA GR+A TNF
Sbjct: 4 TKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFP 63
Query: 125 -KQISCAGTSSDDGDIEMAFLSSHSKS 150
+ TS DI + S S S
Sbjct: 64 LNNNNTGETSEGKTDISASSTMSSSTS 90
>TAIR|locus:2156171 [details] [associations]
symbol:AT5G61890 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0050832 "defense response to fungus"
evidence=IEP] [GO:0006865 "amino acid transport" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0050832 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AB022212 EMBL:AY560862 IPI:IPI00539427
RefSeq:NP_200995.1 UniGene:At.29079 ProteinModelPortal:Q9FH54
SMR:Q9FH54 PaxDb:Q9FH54 PRIDE:Q9FH54 EnsemblPlants:AT5G61890.1
GeneID:836310 KEGG:ath:AT5G61890 TAIR:At5g61890 eggNOG:NOG273323
HOGENOM:HOG000057294 InParanoid:Q9FH54 OMA:FSARSQH PhylomeDB:Q9FH54
ProtClustDB:CLSN2686950 ArrayExpress:Q9FH54 Genevestigator:Q9FH54
Uniprot:Q9FH54
Length = 248
Score = 140 (54.3 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 31/66 (46%), Positives = 41/66 (62%)
Query: 71 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQIS 128
Y+GV +P G+W A+I + K RVWLGTF E AA AYD AA +F+G A NF +
Sbjct: 90 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPERV 149
Query: 129 CAGTSS 134
G++S
Sbjct: 150 QLGSNS 155
>TAIR|locus:2031890 [details] [associations]
symbol:ESR1 "ENHANCER OF SHOOT REGENERATION 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009735
"response to cytokinin stimulus" evidence=IEP] [GO:0009887 "organ
morphogenesis" evidence=IMP] [GO:0010084 "specification of organ
axis polarity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009880 "embryonic pattern specification"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005634 GO:GO:0009735 GO:GO:0009734 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736 EMBL:AC007357
GO:GO:0009880 GO:GO:0048825 GO:GO:0010084 EMBL:AF353577
IPI:IPI00546326 PIR:G86263 RefSeq:NP_172758.1 UniGene:At.28308
ProteinModelPortal:Q9SAD4 SMR:Q9SAD4 IntAct:Q9SAD4 STRING:Q9SAD4
EnsemblPlants:AT1G12980.1 GeneID:837856 KEGG:ath:AT1G12980
TAIR:At1g12980 eggNOG:NOG305471 HOGENOM:HOG000112399
InParanoid:Q9SAD4 OMA:CAYDSAA ProtClustDB:CLSN2914228
Genevestigator:Q9SAD4 Uniprot:Q9SAD4
Length = 328
Score = 143 (55.4 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 38/93 (40%), Positives = 53/93 (56%)
Query: 34 PTKSPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQ 91
PT SP S R S + + + AG +++Y+GV +P GR+ A+I + +
Sbjct: 27 PTASPVSRNRKLSSKDTTVTIAGAGSS-------TTRYRGVRRRPWGRYAAEIRDPMSKE 79
Query: 92 RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
R WLGTF+ E+AA AYD AA+ FRG A TNF
Sbjct: 80 RRWLGTFDTAEQAACAYDSAARAFRGAKARTNF 112
>TAIR|locus:2183304 [details] [associations]
symbol:AT5G07310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL163912 HOGENOM:HOG000057294
ProtClustDB:CLSN2686950 EMBL:AY560885 EMBL:DQ653268 EMBL:BT025717
IPI:IPI00548342 PIR:T49870 RefSeq:NP_196348.1 UniGene:At.50703
ProteinModelPortal:Q9LY29 SMR:Q9LY29 IntAct:Q9LY29 STRING:Q9LY29
EnsemblPlants:AT5G07310.1 GeneID:830622 KEGG:ath:AT5G07310
TAIR:At5g07310 eggNOG:NOG290249 InParanoid:Q9LY29 OMA:GNQSSSH
PhylomeDB:Q9LY29 ArrayExpress:Q9LY29 Genevestigator:Q9LY29
Uniprot:Q9LY29
Length = 263
Score = 140 (54.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 36/108 (33%), Positives = 57/108 (52%)
Query: 71 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQIS 128
Y+GV +P G+W A+I + K RVWLGTF E AA AYD AA +F+G A NF + +
Sbjct: 92 YRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERA 151
Query: 129 --CAGTSSDDG-------DIEMAFLSSHSKSEIVDMLRKHTYNDELEQ 167
+ TS+ G + ++ + + + + + ++ YN L Q
Sbjct: 152 QLASNTSTTTGPPNYYSSNNQIYYSNPQTNPQTIPYFNQYYYNQYLHQ 199
>TAIR|locus:2131854 [details] [associations]
symbol:CBF1 "C-repeat/DRE binding factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009409 "response to cold" evidence=IEP;IMP;TAS]
[GO:0009631 "cold acclimation" evidence=IEP;IMP] [GO:0009414
"response to water deprivation" evidence=IEP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI;IDA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 GO:GO:0045893
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009631 EMBL:AL022197 EMBL:AL161563 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AF076155 EMBL:AY667247
eggNOG:NOG303203 ProtClustDB:CLSN2687445 EMBL:U77378 EMBL:AB007788
EMBL:AB013816 IPI:IPI00540988 PIR:JE0298 RefSeq:NP_567721.1
UniGene:At.232 ProteinModelPortal:P93835 SMR:P93835 IntAct:P93835
STRING:P93835 PRIDE:P93835 EnsemblPlants:AT4G25490.1 GeneID:828653
KEGG:ath:AT4G25490 GeneFarm:3595 TAIR:At4g25490
HOGENOM:HOG000237624 InParanoid:P93835 PhylomeDB:P93835
Genevestigator:P93835 GermOnline:AT4G25490 Uniprot:P93835
Length = 213
Score = 136 (52.9 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 71 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
Y+GV + +G+W +++ E K R+WLGTF E AARA+D+AA RGR A NF
Sbjct: 48 YRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103
>TAIR|locus:2173113 [details] [associations]
symbol:CBF4 "C-repeat-binding factor 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006950
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB015478
ProtClustDB:CLSN2687445 HOGENOM:HOG000237624 EMBL:AY560857
EMBL:DQ447064 EMBL:DQ653361 IPI:IPI00533847 RefSeq:NP_200012.1
UniGene:At.64286 ProteinModelPortal:Q9FJ93 SMR:Q9FJ93 STRING:Q9FJ93
EnsemblPlants:AT5G51990.1 GeneID:835274 KEGG:ath:AT5G51990
GeneFarm:3598 TAIR:At5g51990 eggNOG:NOG249958 InParanoid:Q9FJ93
OMA:RIPETTC PhylomeDB:Q9FJ93 ArrayExpress:Q9FJ93
Genevestigator:Q9FJ93 Uniprot:Q9FJ93
Length = 224
Score = 137 (53.3 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 37/103 (35%), Positives = 50/103 (48%)
Query: 27 TFPASIPPTKSPESLCRVGSGASSVILDSEAGVEAESRKLPSSK---YKGVVPQPNGRWG 83
TFP S S S S + S A +K ++ Y+GV + +G+W
Sbjct: 7 TFPDSFLSISDHRSPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKWV 66
Query: 84 AQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
++ E K R+WLGTF E AARA+D+AA RGR A NF
Sbjct: 67 CEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109
>TAIR|locus:2005493 [details] [associations]
symbol:AP2 "APETALA 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS;TAS]
[GO:0010093 "specification of floral organ identity" evidence=IMP]
[GO:0048316 "seed development" evidence=IMP] [GO:0010073 "meristem
maintenance" evidence=IMP] [GO:0009888 "tissue development"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA;TAS]
[GO:0048481 "ovule development" evidence=IGI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009908 "flower development" evidence=TAS] [GO:0019953 "sexual
reproduction" evidence=TAS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048316
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010093 GO:GO:0048481
EMBL:Z99707 EMBL:AL161590 EMBL:U12546 EMBL:AY128328 IPI:IPI00523209
PIR:A85436 RefSeq:NP_001190938.1 RefSeq:NP_195410.1 UniGene:At.4638
ProteinModelPortal:P47927 SMR:P47927 STRING:P47927
EnsemblPlants:AT4G36920.1 EnsemblPlants:AT4G36920.2 GeneID:829845
KEGG:ath:AT4G36920 TAIR:At4g36920 eggNOG:NOG247476
HOGENOM:HOG000033977 InParanoid:P47927 KO:K09284 OMA:SIYDEEL
PhylomeDB:P47927 ProtClustDB:CLSN2915922 Genevestigator:P47927
GermOnline:AT4G36920 GO:GO:0010073 Uniprot:P47927
Length = 432
Score = 144 (55.7 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 45/125 (36%), Positives = 70/125 (56%)
Query: 68 SSKYKGVVPQPNGRWGAQI--YEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF- 124
SSKY+GV GRW A++ + + V+LG F+ E EAARAYD AA + G+DAVTNF
Sbjct: 221 SSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKDAVTNFD 280
Query: 125 -----KQISC--AG--TSSDDGDIEMAF-LSSHSKSEIVDM-LRKHTYNDELEQSKRNYG 173
++++ +G T+ D +++++ S++SK + DM LR + + S G
Sbjct: 281 PSIYDEELNAESSGNPTTPQDHNLDLSLGNSANSKHKSQDMRLRMNQQQQDSLHSNEVLG 340
Query: 174 LDANG 178
L G
Sbjct: 341 LGQTG 345
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 44/130 (33%), Positives = 71/130 (54%)
Query: 62 ESRKLP---SSKYKGVV-PQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRG 117
+SR+ P SS+Y+GV + GRW + I++ ++V+LG F+ AARAYD AA +FRG
Sbjct: 120 KSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG 179
Query: 118 RDAVTNFKQISCAGTSSDDGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSK-RNYGLDA 176
+A NF + DD D ++ +++ +K E V +LR+ + SK R L
Sbjct: 180 VEADINF--------NIDDYDDDLKQMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHK 231
Query: 177 NGKRVIKHGE 186
G+ + G+
Sbjct: 232 CGRWEARMGQ 241
>TAIR|locus:2026301 [details] [associations]
symbol:CRF8 "AT1G71130" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016036 "cellular
response to phosphate starvation" evidence=RCA] [GO:0019375
"galactolipid biosynthetic process" evidence=RCA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 EMBL:AC016972
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000112390
ProtClustDB:CLSN2687921 EMBL:AK175578 EMBL:AK175683 EMBL:AK175740
EMBL:AK175774 EMBL:AK175931 EMBL:AK176043 EMBL:AK176144
EMBL:AK176280 EMBL:BT025618 EMBL:AY085910 IPI:IPI00531448
PIR:H96735 RefSeq:NP_565012.1 UniGene:At.35227 UniGene:At.74176
ProteinModelPortal:Q9C995 SMR:Q9C995 IntAct:Q9C995
EnsemblPlants:AT1G71130.1 GeneID:843453 KEGG:ath:AT1G71130
TAIR:At1g71130 eggNOG:NOG245226 InParanoid:Q9C995 OMA:RIIRISF
PhylomeDB:Q9C995 Genevestigator:Q9C995 Uniprot:Q9C995
Length = 161
Score = 122 (48.0 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 29/62 (46%), Positives = 37/62 (59%)
Query: 70 KYKGVVPQPNGRWGAQIY-------EKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVT 122
KY+GV +P G+W A+I + R+WLGTFN EEAA AYD A+ + G A T
Sbjct: 78 KYRGVRQRPWGKWVAEIRCGRGACKGRRDRLWLGTFNTAEEAALAYDNASIKLIGPHAPT 137
Query: 123 NF 124
NF
Sbjct: 138 NF 139
>TAIR|locus:2134128 [details] [associations]
symbol:AT4G32800 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL161582 HOGENOM:HOG000237624
ProtClustDB:CLSN2685437 EMBL:BT002924 EMBL:BT004343 EMBL:AY088918
IPI:IPI00548529 PIR:T10687 RefSeq:NP_195006.1 UniGene:At.31634
ProteinModelPortal:Q9M080 SMR:Q9M080 EnsemblPlants:AT4G32800.1
GeneID:829416 KEGG:ath:AT4G32800 TAIR:At4g32800 eggNOG:NOG307860
InParanoid:Q9M080 OMA:EMAMRAH PhylomeDB:Q9M080
Genevestigator:Q9M080 Uniprot:Q9M080
Length = 221
Score = 136 (52.9 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 32/78 (41%), Positives = 46/78 (58%)
Query: 54 DSEAGVEA-ESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDI 110
DS + E E+ K P Y+GV + G+W ++I E K R+WLGTF E A RA+D+
Sbjct: 3 DSSSDKEKKENNKQPV--YRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDV 60
Query: 111 AAQRFRGRDAVTNFKQIS 128
AA +G A+ NF ++S
Sbjct: 61 AAMSIKGTSAILNFPELS 78
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 145 (56.1 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 207 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSGSTSKGLLLNFEDVTGKVWRFRYSYWNS 265
F K +T SD +PK+HA + P L + D+ WRFR++Y +
Sbjct: 126 FTKVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGT 185
Query: 266 SQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKAR--TGPIENPVEPVQMM 323
Q + LT GW+ F+ K L GD++ F R G+ ++ I +AR G I + + + M
Sbjct: 186 PQRHSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIR-RARHQQGNIPSSIVSIDCM 244
Query: 324 R 324
R
Sbjct: 245 R 245
>TAIR|locus:2024076 [details] [associations]
symbol:DRNL "DORNROSCHEN-like" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS;IMP] [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0009880
"embryonic pattern specification" evidence=IMP] [GO:0048825
"cotyledon development" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009733 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0051726
HSSP:O80337 GO:GO:0009736 EMBL:AC000103 GO:GO:0009880 GO:GO:0048825
eggNOG:NOG305471 EMBL:AY560889 EMBL:BT026073 IPI:IPI00520168
RefSeq:NP_173864.1 UniGene:At.64842 ProteinModelPortal:Q9FYK5
SMR:Q9FYK5 IntAct:Q9FYK5 STRING:Q9FYK5 EnsemblPlants:AT1G24590.1
GeneID:839073 KEGG:ath:AT1G24590 TAIR:At1g24590
HOGENOM:HOG000112400 InParanoid:Q9FYK5 OMA:NDVVHES PhylomeDB:Q9FYK5
ProtClustDB:CLSN2914184 Genevestigator:Q9FYK5 GO:GO:0009740
Uniprot:Q9FYK5
Length = 306
Score = 140 (54.3 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 36 KSPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRV 93
+ P G+ + ++A A + + + +Y+GV +P GR+ A+I + +R
Sbjct: 23 RKPSRTSSTAPGSPGGVTTAKAASGAGASGVSTIRYRGVRRRPWGRYAAEIRDPLSKERR 82
Query: 94 WLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
WLGTF+ EEAA AYD AA+ RG A TNF
Sbjct: 83 WLGTFDTAEEAACAYDCAARAMRGLKARTNF 113
>TAIR|locus:2176187 [details] [associations]
symbol:AT5G51190 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009612 "response to mechanical stimulus"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010200 HSSP:O80337 EMBL:AB023044 HOGENOM:HOG000272710
EMBL:AY072345 EMBL:AY114590 EMBL:AY086290 IPI:IPI00545838
RefSeq:NP_568755.1 UniGene:At.19728 ProteinModelPortal:Q8VY90
SMR:Q8VY90 STRING:Q8VY90 PaxDb:Q8VY90 EnsemblPlants:AT5G51190.1
GeneID:835193 KEGG:ath:AT5G51190 TAIR:At5g51190 eggNOG:NOG301109
InParanoid:Q8VY90 OMA:PLEAGKH PhylomeDB:Q8VY90
ProtClustDB:CLSN2917752 Genevestigator:Q8VY90 Uniprot:Q8VY90
Length = 221
Score = 135 (52.6 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 46/158 (29%), Positives = 79/158 (50%)
Query: 2 KREEMDGSCMDEXXXXXXXXXXPPI-TFPASIPPTKSPESLCRVGSGASSVILDSEAGVE 60
+++E D S +D P + TF ++I + +L + +++ + + A V
Sbjct: 7 QQQEQDQSALD-LITQHLLTDFPSLDTFASTIHHCTT-STLSQRKPPLATIAVPTTAPVV 64
Query: 61 AESRKLPSSKYKGVVPQPNGRWGAQIYEKHQ---RVWLGTFNEEEEAARAYDIAAQRFRG 117
E+ + Y+GV +P G++ A+I + ++ RVWLGTF+ EAAR YD AA + RG
Sbjct: 65 QENDQ---RHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRG 121
Query: 118 RDAVTNFKQISCAGTSSDDGDIEMAF-LSSHSKSEIVD 154
A+ NF AG D GD + L + K ++ +
Sbjct: 122 SKAILNFPLE--AGKHEDLGDNKKTISLKAKRKRQVTE 157
>TAIR|locus:2029491 [details] [associations]
symbol:RAP2.4 "related to AP2 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IC;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006970 "response to osmotic
stress" evidence=IEP] [GO:0071472 "cellular response to salt
stress" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IEP;IMP] [GO:0009416 "response to light stimulus"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009873 "ethylene mediated signaling pathway" evidence=IMP]
[GO:0010017 "red or far-red light signaling pathway" evidence=IGI]
[GO:0009611 "response to wounding" evidence=IEP] [GO:0009736
"cytokinin mediated signaling pathway" evidence=IMP] [GO:0045595
"regulation of cell differentiation" evidence=IMP] [GO:0009409
"response to cold" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009611
GO:GO:0009873 GO:GO:0045595 GO:GO:0009409 GO:GO:0009414
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736
GO:GO:0071472 GO:GO:0010017 EMBL:AC009243 EMBL:AC012680
HOGENOM:HOG000239817 UniGene:At.25524 EMBL:AF370152 EMBL:AY150468
EMBL:AF003097 IPI:IPI00519366 RefSeq:NP_177931.1 UniGene:At.71798
ProteinModelPortal:Q8H1E4 SMR:Q8H1E4 MINT:MINT-7262714
STRING:Q8H1E4 EnsemblPlants:AT1G78080.1 GeneID:844143
KEGG:ath:AT1G78080 TAIR:At1g78080 eggNOG:NOG306355
InParanoid:Q8H1E4 OMA:KLEAICK PhylomeDB:Q8H1E4
ProtClustDB:CLSN2679481 Genevestigator:Q8H1E4 Uniprot:Q8H1E4
Length = 334
Score = 140 (54.3 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 45/140 (32%), Positives = 66/140 (47%)
Query: 37 SPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIY--EKHQRVW 94
SP+ L SG + +GV ++ KL Y+GV + G+W A+I R+W
Sbjct: 122 SPKPLLMKQSGVAGSCFAYGSGVPSKPTKL----YRGVRQRHWGKWVAEIRLPRNRTRLW 177
Query: 95 LGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQISCAGT--SSDDGDIEMAFLSSHSKSEI 152
LGTF+ EEAA AYD AA + RG A NF + G+ D G+ + S +K E
Sbjct: 178 LGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHNGSHIGGDFGEYKPLHSSVDAKLEA 237
Query: 153 V--DMLRKHTYNDELEQSKR 170
+ M + + SK+
Sbjct: 238 ICKSMAETQKQDKSTKSSKK 257
>TAIR|locus:2131849 [details] [associations]
symbol:DREB1A "dehydration response element B1A"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009409
"response to cold" evidence=IEP;RCA;IDA;IMP;TAS] [GO:0009414
"response to water deprivation" evidence=RCA;IMP;IDA] [GO:0009631
"cold acclimation" evidence=IMP] [GO:0005982 "starch metabolic
process" evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009631 EMBL:AL022197 EMBL:AL161563 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB007787 EMBL:AB013815
EMBL:AF074602 EMBL:AF076155 EMBL:AF062924 EMBL:AY667247
EMBL:AY691904 EMBL:DQ372533 EMBL:DQ415923 EMBL:BT024594
IPI:IPI00534240 PIR:D85294 PIR:JE0297 PIR:T05799 PIR:T51830
RefSeq:NP_567720.1 UniGene:At.231 ProteinModelPortal:Q9M0L0
SMR:Q9M0L0 STRING:Q9M0L0 PRIDE:Q9M0L0 EnsemblPlants:AT4G25480.1
GeneID:828652 KEGG:ath:AT4G25480 GeneFarm:3593 TAIR:At4g25480
eggNOG:NOG303203 InParanoid:Q9M0L0 PhylomeDB:Q9M0L0
ProtClustDB:CLSN2687445 Genevestigator:Q9M0L0 GermOnline:AT4G25480
Uniprot:Q9M0L0
Length = 216
Score = 134 (52.2 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 71 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
Y+GV + +G+W ++ E K R+WLGTF E AARA+D+AA RGR A NF
Sbjct: 51 YRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 106
>TAIR|locus:2091891 [details] [associations]
symbol:PLT1 "PLETHORA 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007389 "pattern specification process"
evidence=IMP] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0048364 "root development" evidence=IGI;IMP] [GO:0051302
"regulation of cell division" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006950 GO:GO:0009734 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048364 Gene3D:3.30.730.10
SUPFAM:SSF54171 HOGENOM:HOG000239258 GO:GO:0007389 GO:GO:0019827
GO:GO:0051302 EMBL:AB025629 EMBL:AY506549 EMBL:AY585682
IPI:IPI00534725 RefSeq:NP_188720.2 UniGene:At.38171
ProteinModelPortal:Q5YGP8 SMR:Q5YGP8 EnsemblPlants:AT3G20840.1
GeneID:821632 KEGG:ath:AT3G20840 TAIR:At3g20840 eggNOG:NOG263958
InParanoid:Q5YGP8 OMA:NSSYHEL PhylomeDB:Q5YGP8
ProtClustDB:CLSN2680750 Genevestigator:Q5YGP8 Uniprot:Q5YGP8
Length = 574
Score = 143 (55.4 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 32/61 (52%), Positives = 44/61 (72%)
Query: 68 SSKYKGVVPQ-PNGRWGAQI--YEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
+S Y+GV +GRW A+I ++ ++LGTF+ EEEAA AYDIAA +FRG +AVTNF
Sbjct: 281 ASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNF 340
Query: 125 K 125
+
Sbjct: 341 E 341
>TAIR|locus:2036288 [details] [associations]
symbol:ARF22 "auxin response factor 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 ProtClustDB:CLSN2681760
EMBL:AC023913 EMBL:AY669796 IPI:IPI00545778 PIR:C86468
RefSeq:NP_174699.2 UniGene:At.51186 ProteinModelPortal:Q9C8N7
SMR:Q9C8N7 IntAct:Q9C8N7 EnsemblPlants:AT1G34390.1 GeneID:840341
KEGG:ath:AT1G34390 GeneFarm:3426 TAIR:At1g34390 OMA:NITTNAN
PhylomeDB:Q9C8N7 Genevestigator:Q9C8N7 Uniprot:Q9C8N7
Length = 598
Score = 143 (55.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 37/120 (30%), Positives = 58/120 (48%)
Query: 207 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSGSTSKGLLLNFEDVTGKVWRFRYSYWNS 265
F K +T SD +PK+HA + P L L D+ G WRF ++Y +
Sbjct: 126 FTKVLTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGT 183
Query: 266 SQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKA-RTGPIENPVEPVQMMR 324
Q ++LT GW+ F K L AGD++ F R G+ ++ I + G I + + ++ MR
Sbjct: 184 PQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMR 243
>TAIR|locus:1005716457 [details] [associations]
symbol:RAP2.9 "related to AP2 9" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
EMBL:AB073166 EMBL:AY560869 EMBL:BT024689 EMBL:AF003102 EMBL:Z37270
IPI:IPI00535753 RefSeq:NP_849340.1 UniGene:At.47204
ProteinModelPortal:Q8W3M3 SMR:Q8W3M3 EnsemblPlants:AT4G06746.1
GeneID:826148 KEGG:ath:AT4G06746 TAIR:At4g06746 eggNOG:NOG320996
InParanoid:Q8W3M3 OMA:NKLPEAY PhylomeDB:Q8W3M3
ProtClustDB:CLSN2918026 Genevestigator:Q8W3M3 Uniprot:Q8W3M3
Length = 150
Score = 119 (46.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 30/72 (41%), Positives = 39/72 (54%)
Query: 60 EAESRKLPSS---KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQR 114
E R L SS +YKG+ + G+W A+I E K R+WLG++ AARAYD A
Sbjct: 22 EKPKRNLISSNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFY 81
Query: 115 FRGRDAVTNFKQ 126
RG A NF +
Sbjct: 82 LRGPSARLNFPE 93
>UNIPROTKB|A4LBC0 [details] [associations]
symbol:LFL1 "B3 domain-containing protein LFL1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908
GO:GO:0048573 EMBL:AP008207 eggNOG:NOG309510 EMBL:EF521182
EMBL:AP003410 EMBL:AK109920 RefSeq:NP_001044053.1 UniGene:Os.8988
GeneID:4325939 KEGG:dosa:Os01t0713600-01 KEGG:osa:4325939
Gramene:A4LBC0 OMA:YKDDENN ProtClustDB:CLSN2691771 Uniprot:A4LBC0
Length = 402
Score = 140 (54.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 206 LFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYW-- 263
+ +K + SDV +L R+V+PK+ AE + P+ + K L + ++W F+Y YW
Sbjct: 180 ILQKELRYSDVSQLGRIVLPKKEAEAYLPILTSKDGKKSLCMHDLQNAQLWTFKYRYWPN 239
Query: 264 NSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDR 300
N S+ YVL + +V+ +L+ GD + ++ +R
Sbjct: 240 NKSRMYVL-ENTGDYVRTHDLQLGDSIVIYKDDENNR 275
Score = 40 (19.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 121 VTNFKQISCAGTSSDDGD 138
VT+ ++ S A TSS GD
Sbjct: 117 VTSKRRSSSASTSSSSGD 134
>TAIR|locus:2131834 [details] [associations]
symbol:CBF2 "C-repeat/DRE binding factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009631 "cold acclimation" evidence=IMP]
[GO:0009409 "response to cold" evidence=IEP;TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009631
EMBL:AL022197 EMBL:AL161563 KO:K09286 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AF076155 EMBL:AY667247 ProtClustDB:CLSN2687445
HOGENOM:HOG000237624 EMBL:AB007789 EMBL:AB013817 EMBL:AF074601
EMBL:AF062925 EMBL:BT028991 IPI:IPI00525791 PIR:JE0299
RefSeq:NP_567719.1 UniGene:At.233 ProteinModelPortal:Q9SYS6
SMR:Q9SYS6 STRING:Q9SYS6 PRIDE:Q9SYS6 EnsemblPlants:AT4G25470.1
GeneID:828651 KEGG:ath:AT4G25470 GeneFarm:3597 TAIR:At4g25470
eggNOG:NOG298542 InParanoid:Q9SYS6 OMA:ESTCAKE PhylomeDB:Q9SYS6
Genevestigator:Q9SYS6 GermOnline:AT4G25470 Uniprot:Q9SYS6
Length = 216
Score = 133 (51.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 71 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
Y+GV + +G+W ++ E K R+WLGTF E AARA+D+AA RGR A NF
Sbjct: 51 YRGVRQRNSGKWVCELREPNKKTRIWLGTFQTAEMAARAHDVAAIALRGRSACLNF 106
>TAIR|locus:2044845 [details] [associations]
symbol:HRD "HARDY" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050832 "defense
response to fungus" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009873 GO:GO:0050832 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC006919 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 HOGENOM:HOG000237624 EMBL:AY560867 EMBL:DQ446604
EMBL:DQ653045 IPI:IPI00534962 PIR:H84780 RefSeq:NP_181186.1
UniGene:At.64963 ProteinModelPortal:Q9SJR0 SMR:Q9SJR0
EnsemblPlants:AT2G36450.1 GeneID:818219 KEGG:ath:AT2G36450
TAIR:At2g36450 eggNOG:NOG251289 InParanoid:Q9SJR0 OMA:REPRKPN
PhylomeDB:Q9SJR0 ProtClustDB:CLSN2716339 Genevestigator:Q9SJR0
Uniprot:Q9SJR0
Length = 184
Score = 128 (50.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 71 YKGVVPQPNG-RWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF-KQ 126
Y+GV + N +W ++I E K R+WLGTF+ E AA AYD+AA +G A NF
Sbjct: 15 YRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNFPNS 74
Query: 127 ISC--AGTSSDDGDIEMAFLSS 146
+S A TS DI+ A S+
Sbjct: 75 VSSLPAPTSMSPADIQAAAASA 96
>TAIR|locus:2145249 [details] [associations]
symbol:tny "TINY" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009825 "multidimensional cell growth" evidence=IMP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
ProtClustDB:CLSN2686631 EMBL:AC005405 EMBL:X94698 EMBL:AY560855
EMBL:BT024923 IPI:IPI00548044 PIR:T01076 RefSeq:NP_197953.1
UniGene:At.5373 ProteinModelPortal:Q39127 SMR:Q39127 IntAct:Q39127
STRING:Q39127 EnsemblPlants:AT5G25810.1 GeneID:832650
KEGG:ath:AT5G25810 GeneFarm:3729 TAIR:At5g25810 eggNOG:NOG248116
InParanoid:Q39127 OMA:SWEASAV PhylomeDB:Q39127
Genevestigator:Q39127 Uniprot:Q39127
Length = 218
Score = 133 (51.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 32/86 (37%), Positives = 52/86 (60%)
Query: 71 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQIS 128
Y+GV + G+W ++I E K R+WLGTF E AARA+D+AA +G A+ NF ++
Sbjct: 36 YRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLA 95
Query: 129 CA---GTSSDDGDIEMAFL-SSHSKS 150
+ +S DI++A L ++H ++
Sbjct: 96 GSFPRPSSLSPRDIQVAALKAAHMET 121
>TAIR|locus:2129116 [details] [associations]
symbol:ERF-1 "ethylene responsive element binding factor
1" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IDA] [GO:0005643 "nuclear pore"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 EMBL:Z97343
EMBL:AL161546 EMBL:AY058174 EMBL:AY062533 EMBL:BT002578
EMBL:AB008103 IPI:IPI00518702 PIR:A85196 PIR:T51988
RefSeq:NP_567530.4 UniGene:At.23185 UniGene:At.68141 PDB:1GCC
PDB:2GCC PDB:3GCC PDBsum:1GCC PDBsum:2GCC PDBsum:3GCC
ProteinModelPortal:O80337 SMR:O80337 STRING:O80337
EnsemblPlants:AT4G17500.1 GeneID:827464 KEGG:ath:AT4G17500
TAIR:At4g17500 eggNOG:NOG246525 HOGENOM:HOG000239314
InParanoid:O80337 OMA:PVYCRST PhylomeDB:O80337
ProtClustDB:CLSN2715394 EvolutionaryTrace:O80337
Genevestigator:O80337 GermOnline:AT4G17500 Uniprot:O80337
Length = 268
Score = 136 (52.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 39/100 (39%), Positives = 52/100 (52%)
Query: 30 ASIPPTK--SPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIY 87
+S P K +PES V S V + + V A Y+GV +P G++ A+I
Sbjct: 107 SSFPSVKIETPESFAAVDS--VPVKKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIR 164
Query: 88 EKHQ---RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
+ + RVWLGTF E+AA AYD AA R RG A+ NF
Sbjct: 165 DPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNF 204
>TAIR|locus:2115005 [details] [associations]
symbol:RAP2.10 "related to AP2 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:Z99707 EMBL:AL161590
HOGENOM:HOG000237624 ProtClustDB:CLSN2683886 EMBL:AF003103
EMBL:AJ002598 EMBL:AY057683 EMBL:BT020317 EMBL:BT020302
EMBL:BT025757 IPI:IPI00532035 PIR:G85435 PIR:T52619
RefSeq:NP_195408.1 UniGene:At.461 ProteinModelPortal:Q9SW63
SMR:Q9SW63 EnsemblPlants:AT4G36900.1 GeneID:829843
KEGG:ath:AT4G36900 TAIR:At4g36900 eggNOG:NOG321299
InParanoid:Q9SW63 OMA:ECSSKEG PhylomeDB:Q9SW63
Genevestigator:Q9SW63 Uniprot:Q9SW63
Length = 196
Score = 130 (50.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 32/91 (35%), Positives = 48/91 (52%)
Query: 49 SSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAAR 106
++V+ V A + + YKG+ + G+W A+I E K R+WLG+++ E AAR
Sbjct: 8 ATVVSTPAVTVAAVATRKRDKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAAR 67
Query: 107 AYDIAAQRFRGRDAVTNFKQISCAGTSSDDG 137
AYD A RG A NF ++ AG + G
Sbjct: 68 AYDTAVFYLRGPSARLNFPEL-LAGVTVTGG 97
>TAIR|locus:2014731 [details] [associations]
symbol:ARF14 "auxin response factor 14" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC007887 IPI:IPI00548517 PIR:G86476
RefSeq:NP_174786.1 UniGene:At.39556 ProteinModelPortal:Q9LQE8
SMR:Q9LQE8 IntAct:Q9LQE8 PRIDE:Q9LQE8 EnsemblPlants:AT1G35540.1
GeneID:840450 KEGG:ath:AT1G35540 GeneFarm:3394 TAIR:At1g35540
OMA:DITEDAM PhylomeDB:Q9LQE8 Genevestigator:Q9LQE8 Uniprot:Q9LQE8
Length = 605
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/120 (30%), Positives = 58/120 (48%)
Query: 207 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSGSTSKGLLLNFEDVTGKVWRFRYSYWNS 265
F K +T SD +PK+HA + P L + D+ G WRFR+ Y +
Sbjct: 126 FTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGT 185
Query: 266 SQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKA-RTGPIENPVEPVQMMR 324
+Q ++LT GW+ F K L GD++ F R G+ ++ I + G I + + ++ MR
Sbjct: 186 AQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMR 245
>TAIR|locus:2058764 [details] [associations]
symbol:ERF38 "ERF family protein 38" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0009834 "secondary cell wall
biogenesis" evidence=TAS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC006068 GO:GO:0009834
HOGENOM:HOG000237624 EMBL:AY560845 EMBL:DQ446600 EMBL:DQ653042
EMBL:BT025754 IPI:IPI00524895 PIR:H84771 RefSeq:NP_181113.1
UniGene:At.50671 ProteinModelPortal:Q9ZQP3 SMR:Q9ZQP3
EnsemblPlants:AT2G35700.1 GeneID:818139 KEGG:ath:AT2G35700
TAIR:At2g35700 eggNOG:NOG276561 InParanoid:Q9ZQP3 OMA:MDVETSS
PhylomeDB:Q9ZQP3 ProtClustDB:CLSN2683800 Genevestigator:Q9ZQP3
Uniprot:Q9ZQP3
Length = 194
Score = 129 (50.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 32/90 (35%), Positives = 53/90 (58%)
Query: 71 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQIS 128
++GV + G+W ++I E K R+WLGTF+ E AARA+D+AA +G A NF +++
Sbjct: 45 FRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPELA 104
Query: 129 C---AGTSSDDGDIEMAFLSSHSKSEIVDM 155
S+D DI+ A ++ + + +DM
Sbjct: 105 YHLPRPASADPKDIQAAAAAA-AAAVAIDM 133
>TAIR|locus:2094897 [details] [associations]
symbol:AT3G16280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB023046
EMBL:AC001645 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
HOGENOM:HOG000237624 EMBL:AY995152 EMBL:AY560846 IPI:IPI00539623
RefSeq:NP_188249.3 UniGene:At.50189 ProteinModelPortal:Q9LU18
SMR:Q9LU18 EnsemblPlants:AT3G16280.1 GeneID:820874
KEGG:ath:AT3G16280 GeneFarm:2905 TAIR:At3g16280 eggNOG:NOG281093
InParanoid:Q9LU18 OMA:LPNIEEG ProtClustDB:CLSN2918820
Genevestigator:Q9LU18 Uniprot:Q9LU18
Length = 236
Score = 133 (51.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 39/126 (30%), Positives = 67/126 (53%)
Query: 54 DSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIA 111
DS + + S + P Y+GV + G+W ++I + K R+WLGTF + AARA+D+A
Sbjct: 46 DSSSASSSSSMQHPV--YRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVA 103
Query: 112 AQRFRGRDAVTNFKQISCA---GTSSDDGDIEMAFLSSHSKSEIVD--MLRKHTYNDELE 166
A +G AV NF +++ SS DI+ A ++ + + +V+ +L K +
Sbjct: 104 ALTIKGSSAVLNFPELASLFPRPASSSPHDIQTA--AAEAAAMVVEEKLLEKDEAPEAPP 161
Query: 167 QSKRNY 172
S+ +Y
Sbjct: 162 SSESSY 167
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 143 (55.4 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 40/113 (35%), Positives = 52/113 (46%)
Query: 184 HGEGDGAATA-FGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSGSTS 241
H E D FG R K + F K +T SD +P++ AEK FP L +
Sbjct: 134 HSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQP 193
Query: 242 KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHR 294
L D+ W FR+ Y + ++LT GWS FV K L+AGD V F R
Sbjct: 194 PTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 246
>TAIR|locus:2146985 [details] [associations]
symbol:ESE3 "ethylene and salt inducible 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009740 "gibberellic acid
mediated signaling pathway" evidence=RCA] [GO:0010162 "seed
dormancy process" evidence=RCA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AC006259
HOGENOM:HOG000237624 EMBL:AY045659 EMBL:AY059664 IPI:IPI00523095
RefSeq:NP_197901.1 UniGene:At.26169 ProteinModelPortal:Q94AW5
SMR:Q94AW5 EnsemblPlants:AT5G25190.1 GeneID:832590
KEGG:ath:AT5G25190 TAIR:At5g25190 eggNOG:NOG283264
InParanoid:Q94AW5 OMA:IMCGPRA PhylomeDB:Q94AW5
ProtClustDB:CLSN2686531 Genevestigator:Q94AW5 Uniprot:Q94AW5
Length = 181
Score = 126 (49.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 35/115 (30%), Positives = 54/115 (46%)
Query: 67 PSSKYKGVVPQPNGRWGAQIYEK--HQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
P +++GV + G W ++I R+WLGTF E+AARAYD AA+ G A TNF
Sbjct: 4 PQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNF 63
Query: 125 KQISCAGTSSDDGDIEMAFLSSHSKSEIVDM-LRKHTYNDELEQSKRNYGLDANG 178
A +S + + K + + + K T Q+ R+ D++G
Sbjct: 64 PYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADSDG 118
>TAIR|locus:2030265 [details] [associations]
symbol:AT1G72570 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=ISS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
EMBL:AY603417 EMBL:AC010926 EMBL:DQ446422 EMBL:DQ652930
IPI:IPI00529030 PIR:B96750 RefSeq:NP_177401.2 UniGene:At.50661
ProteinModelPortal:Q1PFE1 SMR:Q1PFE1 EnsemblPlants:AT1G72570.1
GeneID:843589 KEGG:ath:AT1G72570 TAIR:At1g72570 eggNOG:NOG295761
HOGENOM:HOG000239258 InParanoid:Q1PFE1 KO:K09285 OMA:TPPLRIC
PhylomeDB:Q1PFE1 ProtClustDB:CLSN2920249 Genevestigator:Q1PFE1
Uniprot:Q1PFE1
Length = 415
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 68 SSKYKGVVPQ-PNGRWGAQI--YEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
+S Y+GV +GRW A+I ++ ++LGTF+ +EEAA AYDIAA +FRG +AVTNF
Sbjct: 323 ASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNF 382
>TAIR|locus:2173063 [details] [associations]
symbol:AT5G52020 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0050832 "defense response to fungus"
evidence=IEP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0050832
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB015478 HOGENOM:HOG000237624
EMBL:AK176464 EMBL:AY086443 IPI:IPI00519238 RefSeq:NP_200015.1
UniGene:At.58041 ProteinModelPortal:Q9FJ90 SMR:Q9FJ90
EnsemblPlants:AT5G52020.1 GeneID:835277 KEGG:ath:AT5G52020
TAIR:At5g52020 eggNOG:NOG256892 InParanoid:Q9FJ90 OMA:SPENHEG
PhylomeDB:Q9FJ90 ProtClustDB:CLSN2916850 Genevestigator:Q9FJ90
Uniprot:Q9FJ90
Length = 232
Score = 132 (51.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 43/122 (35%), Positives = 57/122 (46%)
Query: 26 ITFPASIPPTKSPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQ 85
IT P P SP S S S A A S ++G+ + NG+W ++
Sbjct: 23 ITLPTDQSPQTSPGSSSSPSPRPSG---GSPARRTATGLSGKHSIFRGIRLR-NGKWVSE 78
Query: 86 IYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQISC---AGTSSDDGDIE 140
I E K R+WLGT+ E AA AYD+AA +G DAV NF ++ A S+ DI
Sbjct: 79 IREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVLNFPGLALTYVAPVSNSAADIR 138
Query: 141 MA 142
A
Sbjct: 139 AA 140
>TAIR|locus:2103301 [details] [associations]
symbol:AT3G60490 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL138646 HOGENOM:HOG000237624
EMBL:AY560848 EMBL:BT029458 IPI:IPI00540804 PIR:T47860
RefSeq:NP_191608.1 UniGene:At.34438 ProteinModelPortal:Q9M210
SMR:Q9M210 EnsemblPlants:AT3G60490.1 GeneID:825220
KEGG:ath:AT3G60490 GeneFarm:2902 TAIR:At3g60490 eggNOG:NOG305121
InParanoid:Q9M210 OMA:ESSATHH PhylomeDB:Q9M210
ProtClustDB:CLSN2915626 Genevestigator:Q9M210 Uniprot:Q9M210
Length = 256
Score = 133 (51.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 27 TFPASIPPTKSPESLCRVGSGASSVILDSEAGVE------AESRKLPSSKYKGVVPQPNG 80
T +S T S +S + S++ D+++G + ++ K P+S Y+GV + G
Sbjct: 25 TISSSSVVTSSSDSW---STSKRSLVQDNDSGGKRRKSNVSDDNKNPTS-YRGVRMRSWG 80
Query: 81 RWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQIS 128
+W ++I E K R+WLGT+ E AARA+D+AA +G NF ++S
Sbjct: 81 KWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELS 130
>TAIR|locus:2017829 [details] [associations]
symbol:WRI4 "WRINKLED 4" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IC] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0000981 "sequence-specific DNA binding
RNA polymerase II transcription factor activity" evidence=IPI]
[GO:0045723 "positive regulation of fatty acid biosynthetic
process" evidence=IGI;IMP] [GO:1901959 "positive regulation of
cutin biosynthetic process" evidence=IGI] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0009887 "organ morphogenesis" evidence=ISS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 KO:K09285 HOGENOM:HOG000238389 EMBL:AC010793
UniGene:At.21701 UniGene:At.48398 IPI:IPI00846298
RefSeq:NP_001077849.1 ProteinModelPortal:A8MQS2 SMR:A8MQS2
STRING:A8MQS2 EnsemblPlants:AT1G79700.2 GeneID:844309
KEGG:ath:AT1G79700 OMA:GKLATEE ProtClustDB:CLSN2680813
Genevestigator:A8MQS2 Uniprot:A8MQS2
Length = 313
Score = 135 (52.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 42/127 (33%), Positives = 68/127 (53%)
Query: 46 SGASSVILDSEAGVEAESRKLP---SSKYKGVVPQP-NGRWGAQIYEKH----------Q 91
S ++S+ L S+ ++ R P SS Y+GV GR+ A +++K+ +
Sbjct: 25 SESASIALTSKRKRKSPPRNAPLQRSSPYRGVTRHRWTGRYEAHLWDKNSWNDTQTKKGR 84
Query: 92 RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQISCAGTSSDDGDIEMAFLSSHSKSE 151
+V+LG ++EEE AARAYD+AA ++ GRD + NF S D D++ + SK E
Sbjct: 85 QVYLGAYDEEEAAARAYDLAALKYWGRDTLLNFP------LPSYDEDVKE--MEGQSKEE 136
Query: 152 IVDMLRK 158
+ LR+
Sbjct: 137 YIGSLRR 143
Score = 133 (51.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 31/59 (52%), Positives = 41/59 (69%)
Query: 69 SKYKGVVPQP-NGRWGAQIYEK--HQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
SKY+GV NGRW A+I ++ ++LGT+ +EEAA AYDIAA +RG +AVTNF
Sbjct: 153 SKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAAIAYDIAAIEYRGLNAVTNF 211
>TAIR|locus:2076720 [details] [associations]
symbol:CRF6 "AT3G61630" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0042991 "transcription factor import
into nucleus" evidence=RCA;IDA] [GO:0048366 "leaf development"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0005737 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736 GO:GO:0048366
EMBL:AL132959 GO:GO:0048825 GO:GO:0042991 HOGENOM:HOG000237664
ProtClustDB:CLSN2683458 EMBL:BX822244 IPI:IPI00528170 PIR:T47955
RefSeq:NP_191722.1 UniGene:At.34258 ProteinModelPortal:Q9M374
SMR:Q9M374 IntAct:Q9M374 STRING:Q9M374 EnsemblPlants:AT3G61630.1
GeneID:825336 KEGG:ath:AT3G61630 TAIR:At3g61630 eggNOG:NOG296971
InParanoid:Q9M374 OMA:HINEIRI PhylomeDB:Q9M374
Genevestigator:Q9M374 Uniprot:Q9M374
Length = 315
Score = 135 (52.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 54/202 (26%), Positives = 83/202 (41%)
Query: 63 SRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDA 120
S + KY+GV +P G++ A+I + R+WLGTF EEAA AYD AA +G A
Sbjct: 97 STSVKPKKYRGVRQRPWGKFAAEIRDPSSRTRIWLGTFVTAEEAAIAYDRAAIHLKGPKA 156
Query: 121 VTNFKQISCAGTSSDDGDIEMAFLSSHSKSEI---VDMLRKHTYNDELEQSKRNYGLDAN 177
+TNF D + S+ + +LR + N+E E L
Sbjct: 157 LTNFLTPPTPTPVIDLQTVSACDYGRDSRQSLHSPTSVLRFNV-NEETEHEIEAIELSPE 215
Query: 178 GKR-VIKHGEGDGAATAFGSDRVLK----ARDQLFEKAVTPS-----DVGKLNRLVIPKQ 227
K VIK E A F +L A + ++ + P + K+ ++P
Sbjct: 216 RKSTVIKEEEESSAGLVFPDPYLLPDLSLAGECFWDTEIAPDLLFLDEETKIQSTLLPNT 275
Query: 228 HAEKHFPLQSGSTSKGLLLNFE 249
K ++ GL+ +FE
Sbjct: 276 EVSKQGENETEDFEFGLIDDFE 297
>TAIR|locus:2173009 [details] [associations]
symbol:AIL5 "AINTEGUMENTA-like 5" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0009845 "seed
germination" evidence=RCA;IMP] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0060771 "phyllotactic patterning" evidence=IGI]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=ISS;IMP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009845
HOGENOM:HOG000239258 KO:K09285 EMBL:AY585685 EMBL:AB016891
IPI:IPI00518096 RefSeq:NP_200549.2 UniGene:At.29336
ProteinModelPortal:Q6PQQ3 SMR:Q6PQQ3 EnsemblPlants:AT5G57390.1
GeneID:835845 KEGG:ath:AT5G57390 GeneFarm:2582 TAIR:At5g57390
eggNOG:NOG258934 InParanoid:Q6PQQ3 OMA:WINNNIS PhylomeDB:Q6PQQ3
ProtClustDB:CLSN2681678 Genevestigator:Q6PQQ3 GO:GO:0060771
GO:GO:0040019 Uniprot:Q6PQQ3
Length = 558
Score = 139 (54.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 68 SSKYKGVVPQ-PNGRWGAQI--YEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
+S Y+GV +GRW A+I ++ ++LGTF+ +EEAA AYDIAA +FRG +AVTNF
Sbjct: 303 ASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNF 362
>TAIR|locus:2195985 [details] [associations]
symbol:AT1G77200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 EMBL:AC004260 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
EMBL:AY560875 EMBL:DQ446437 EMBL:DQ652938 IPI:IPI00531080
PIR:T00449 RefSeq:NP_177844.1 UniGene:At.50584
ProteinModelPortal:O80654 SMR:O80654 EnsemblPlants:AT1G77200.1
GeneID:844056 KEGG:ath:AT1G77200 TAIR:At1g77200 eggNOG:NOG297347
InParanoid:O80654 OMA:DENGISM PhylomeDB:O80654
ProtClustDB:CLSN2912844 Genevestigator:O80654 Uniprot:O80654
Length = 244
Score = 132 (51.5 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 71 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQIS 128
Y+GV + G+W ++I E K R+WLGTF+ E AARA+D AA +G AV NF +++
Sbjct: 43 YRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELA 102
Query: 129 C---AGTSSDDGDIEMA 142
SS D++ A
Sbjct: 103 TYLPRPASSSPRDVQAA 119
>TAIR|locus:2195062 [details] [associations]
symbol:AT1G12630 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
EMBL:AC025417 EMBL:DQ145776 EMBL:DQ446245 EMBL:DQ652834
EMBL:AY560893 IPI:IPI00534088 PIR:A86260 RefSeq:NP_172723.2
UniGene:At.50648 ProteinModelPortal:Q38Q39 SMR:Q38Q39
EnsemblPlants:AT1G12630.1 GeneID:837819 KEGG:ath:AT1G12630
TAIR:At1g12630 eggNOG:NOG249688 InParanoid:Q38Q39 OMA:RARECHV
PhylomeDB:Q38Q39 ProtClustDB:CLSN2920226 Genevestigator:Q38Q39
Uniprot:Q38Q39
Length = 192
Score = 127 (49.8 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 55 SEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAA 112
+ AG+ + RK P Y+G+ + +G+W ++I E K R+WLGT+ E AA AYD+AA
Sbjct: 6 ASAGLGSR-RKDPV--YRGIRCR-SGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAA 61
Query: 113 QRFRGRDAVTNF 124
+GR+AV NF
Sbjct: 62 MALKGREAVLNF 73
>TAIR|locus:2171529 [details] [associations]
symbol:ERF5 "ethylene responsive element binding factor
5" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0009873
"ethylene mediated signaling pathway" evidence=RCA;TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=IEP] [GO:0010200 "response
to chitin" evidence=IEP;RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006952 GO:GO:0009873 GO:GO:0003677
GO:GO:0009409 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 EMBL:AB018117
EMBL:AB008107 EMBL:AK117568 EMBL:AF385709 EMBL:AY078014
IPI:IPI00541991 PIR:T52020 RefSeq:NP_568679.1 UniGene:At.9512
ProteinModelPortal:O80341 SMR:O80341 STRING:O80341 PRIDE:O80341
EnsemblPlants:AT5G47230.1 GeneID:834770 KEGG:ath:AT5G47230
TAIR:At5g47230 eggNOG:NOG281949 HOGENOM:HOG000272710
InParanoid:O80341 OMA:TEWIQFA PhylomeDB:O80341
ProtClustDB:CLSN2689485 Genevestigator:O80341 GermOnline:AT5G47230
Uniprot:O80341
Length = 300
Score = 134 (52.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 71 YKGVVPQPNGRWGAQIYEKHQR---VWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFK-Q 126
Y+GV +P G++ A+I + ++R VWLGTF+ EAARAYD AA R RG A+ NF +
Sbjct: 156 YRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLE 215
Query: 127 ISCAGTSSDDGD 138
+ +D+G+
Sbjct: 216 VGKWKPRADEGE 227
>TAIR|locus:2155598 [details] [associations]
symbol:TOE3 "target of early activation tagged (EAT) 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009408
"response to heat" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB020742
HOGENOM:HOG000033977 KO:K09284 EMBL:AK176145 EMBL:BT029206
EMBL:AY088238 IPI:IPI00536061 RefSeq:NP_201519.1 UniGene:At.28821
UniGene:At.28822 ProteinModelPortal:Q9FH95 SMR:Q9FH95 PRIDE:Q9FH95
EnsemblPlants:AT5G67180.1 GeneID:836853 KEGG:ath:AT5G67180
TAIR:At5g67180 eggNOG:NOG326403 InParanoid:Q9FH95 OMA:PDHHEES
PhylomeDB:Q9FH95 ProtClustDB:CLSN2916545 Genevestigator:Q9FH95
Uniprot:Q9FH95
Length = 352
Score = 135 (52.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 30/59 (50%), Positives = 40/59 (67%)
Query: 68 SSKYKGVVPQPNGRWGAQI--YEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
SSKY+GV GRW +++ + + V+LG F+ E EAARAYD AA + G+DAVTNF
Sbjct: 186 SSKYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNF 244
Score = 127 (49.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 31/67 (46%), Positives = 44/67 (65%)
Query: 62 ESRKLP---SSKYKGVV-PQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRG 117
+SR+ P SS+Y+GV + GRW + I++ ++V+LG F+ AARAYD AA +FRG
Sbjct: 85 KSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG 144
Query: 118 RDAVTNF 124
DA NF
Sbjct: 145 VDADINF 151
>TAIR|locus:2034295 [details] [associations]
symbol:AT1G36060 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC006228 EMBL:AC021666
EMBL:BT005758 EMBL:BT006078 EMBL:AK228415 IPI:IPI00549083
PIR:E86482 RefSeq:NP_564468.1 UniGene:At.39425
ProteinModelPortal:Q9SKW5 SMR:Q9SKW5 STRING:Q9SKW5
EnsemblPlants:AT1G36060.1 GeneID:840510 KEGG:ath:AT1G36060
TAIR:At1g36060 eggNOG:NOG329700 HOGENOM:HOG000239817
InParanoid:Q9SKW5 OMA:YKSASTS PhylomeDB:Q9SKW5
ProtClustDB:CLSN2914986 Genevestigator:Q9SKW5 Uniprot:Q9SKW5
Length = 314
Score = 134 (52.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 35/88 (39%), Positives = 49/88 (55%)
Query: 55 SEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIY--EKHQRVWLGTFNEEEEAARAYDIAA 112
++ G + S P+ Y+GV + G+W A+I R+WLGTF+ EEAA AYD AA
Sbjct: 127 TQPGPSSGSVSKPAKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAA 186
Query: 113 QRFRGRDAVTNFKQISC-AGTS-SDDGD 138
+ RG A NF + G+S SD G+
Sbjct: 187 FKLRGDSARLNFPALRYQTGSSPSDTGE 214
>TAIR|locus:2171514 [details] [associations]
symbol:ERF2 "ethylene responsive element binding factor
2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0009873
"ethylene mediated signaling pathway" evidence=RCA;TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0009864 "induced systemic resistance,
jasmonic acid mediated signaling pathway" evidence=IMP] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0002679 "respiratory
burst involved in defense response" evidence=RCA] [GO:0009693
"ethylene biosynthetic process" evidence=RCA] [GO:0009723 "response
to ethylene stimulus" evidence=RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0035556 "intracellular
signal transduction" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200
EMBL:AB018117 HOGENOM:HOG000239314 EMBL:AB008104 EMBL:AK175151
EMBL:AK175229 EMBL:AK176532 EMBL:AK176606 EMBL:AK176825
EMBL:BT024470 EMBL:AY086983 IPI:IPI00521608 PIR:T51989
RefSeq:NP_199533.1 UniGene:At.19731 ProteinModelPortal:O80338
SMR:O80338 STRING:O80338 PRIDE:O80338 EnsemblPlants:AT5G47220.1
GeneID:834768 KEGG:ath:AT5G47220 TAIR:At5g47220 eggNOG:NOG285540
InParanoid:O80338 KO:K14517 OMA:TPSSCFT PhylomeDB:O80338
ProtClustDB:CLSN2914897 Genevestigator:O80338 GermOnline:AT5G47220
GO:GO:0009864 Uniprot:O80338
Length = 243
Score = 131 (51.2 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 39/101 (38%), Positives = 54/101 (53%)
Query: 28 FPA-SIPPTKSPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQI 86
FPA + PT E+ + I +E V+A+ Y+GV +P G++ A+I
Sbjct: 83 FPAVKVEPT---ENFTAMEEKPKKAIPVTETAVKAKH-------YRGVRQRPWGKFAAEI 132
Query: 87 YEKHQ---RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
+ + RVWLGTF E+AA AYDIAA R RG A+ NF
Sbjct: 133 RDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNF 173
>TAIR|locus:2825842 [details] [associations]
symbol:RAP2.1 "related to AP2 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009873
GO:GO:0003677 GO:GO:0009409 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC083835 HOGENOM:HOG000237624 EMBL:BT024691
EMBL:AY086838 EMBL:Z27045 EMBL:AF003094 IPI:IPI00543804 PIR:H96511
RefSeq:NP_564496.1 UniGene:At.28676 ProteinModelPortal:Q8LC30
SMR:Q8LC30 PaxDb:Q8LC30 PRIDE:Q8LC30 EnsemblPlants:AT1G46768.1
GeneID:841117 KEGG:ath:AT1G46768 TAIR:At1g46768 eggNOG:NOG284485
InParanoid:Q8LC30 OMA:QEESTMR PhylomeDB:Q8LC30
ProtClustDB:CLSN2917164 Genevestigator:Q8LC30 Uniprot:Q8LC30
Length = 153
Score = 114 (45.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 71 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQI 127
Y+G+ + G+W A+I E K R+WLG++ + AARAYD+A RG A NF +
Sbjct: 31 YRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNFPDL 89
>TAIR|locus:2200477 [details] [associations]
symbol:ADAP "ARIA-interacting double AP2 domain protein"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IMP] [GO:0009737
"response to abscisic acid stimulus" evidence=IMP] [GO:0010187
"negative regulation of seed germination" evidence=IMP] [GO:0040008
"regulation of growth" evidence=IMP] [GO:0000981 "sequence-specific
DNA binding RNA polymerase II transcription factor activity"
evidence=IPI] [GO:0045723 "positive regulation of fatty acid
biosynthetic process" evidence=IGI;IMP] [GO:1901959 "positive
regulation of cutin biosynthetic process" evidence=IGI] [GO:0009887
"organ morphogenesis" evidence=ISS] [GO:0003677 "DNA binding"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010187
GO:GO:0040008 KO:K09285 EMBL:AC010924 EMBL:AY045915 EMBL:AY133880
IPI:IPI00524024 IPI:IPI00535618 PIR:D86295 RefSeq:NP_563990.1
RefSeq:NP_973839.1 UniGene:At.11854 ProteinModelPortal:Q94AN4
SMR:Q94AN4 IntAct:Q94AN4 PRIDE:Q94AN4 EnsemblPlants:AT1G16060.1
GeneID:838176 KEGG:ath:AT1G16060 TAIR:At1g16060 eggNOG:NOG326907
HOGENOM:HOG000238389 InParanoid:Q94AN4 OMA:MESQSKE PhylomeDB:Q94AN4
ProtClustDB:CLSN2917011 Genevestigator:Q94AN4 Uniprot:Q94AN4
Length = 345
Score = 134 (52.2 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 31/59 (52%), Positives = 41/59 (69%)
Query: 69 SKYKGVVPQP-NGRWGAQIYEK--HQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
SKY+GV NGRW A+I ++ ++LGT+ +EEAA AYDIAA +RG +AVTNF
Sbjct: 159 SKYRGVAKHHHNGRWEARIGRVFGNKYLYLGTYATQEEAAIAYDIAAIEYRGLNAVTNF 217
Score = 132 (51.5 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 41/125 (32%), Positives = 70/125 (56%)
Query: 48 ASSVILDSEAGVEAESRKLP---SSKYKGVVPQP-NGRWGAQIYEKH----------QRV 93
A+SV+L ++ ++ R P SS ++GV GR+ A +++K+ ++V
Sbjct: 33 ATSVVLKAKRKRRSQPRDAPPQRSSVHRGVTRHRWTGRYEAHLWDKNSWNETQTKKGRQV 92
Query: 94 WLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQISCAGTSSDDGDIEMAFLSSHSKSEIV 153
+LG ++EE+ AARAYD+AA ++ GRD + NF C + + DI+ + S SK E +
Sbjct: 93 YLGAYDEEDAAARAYDLAALKYWGRDTILNFPL--C----NYEEDIKE--MESQSKEEYI 144
Query: 154 DMLRK 158
LR+
Sbjct: 145 GSLRR 149
>TAIR|locus:2043495 [details] [associations]
symbol:ESE2 "ethylene and salt inducible 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC005395 HOGENOM:HOG000237624 EMBL:AY974198
EMBL:AY600555 EMBL:AF370341 EMBL:AY063000 EMBL:AY560870
EMBL:AY924749 IPI:IPI00533727 PIR:B84653 RefSeq:NP_565609.3
UniGene:At.13046 ProteinModelPortal:Q52QU1 SMR:Q52QU1
EnsemblPlants:AT2G25820.1 GeneID:817124 KEGG:ath:AT2G25820
TAIR:At2g25820 eggNOG:NOG262348 OMA:FPELADF PhylomeDB:Q52QU1
ProtClustDB:CLSN2685437 Genevestigator:Q52QU1 Uniprot:Q52QU1
Length = 225
Score = 129 (50.5 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 54 DSEAGVEAESRKLPSSK-YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDI 110
D+E + + K Y+G + G+W ++I E K R+WLGTF E AARA+D+
Sbjct: 8 DTECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDV 67
Query: 111 AAQRFRGRDAVTNFKQIS 128
AA +G A+ NF +++
Sbjct: 68 AALSIKGSSAILNFPELA 85
>TAIR|locus:2136078 [details] [associations]
symbol:CRF1 "AT4G11140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0042991 "transcription factor import into nucleus"
evidence=RCA;IDA] [GO:0048366 "leaf development" evidence=RCA;IMP]
[GO:0048825 "cotyledon development" evidence=RCA;IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0006406 "mRNA export from
nucleus" evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161531
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736
GO:GO:0048366 GO:GO:0048825 GO:GO:0042991 EMBL:AY560849
EMBL:AF080120 EMBL:AL049876 EMBL:BT025176 IPI:IPI00542737
PIR:T01919 RefSeq:NP_192852.1 UniGene:At.33584
ProteinModelPortal:O82503 SMR:O82503 IntAct:O82503 PRIDE:O82503
EnsemblPlants:AT4G11140.1 GeneID:826715 KEGG:ath:AT4G11140
TAIR:At4g11140 eggNOG:NOG254393 HOGENOM:HOG000237664
InParanoid:O82503 OMA:SSWHVED PhylomeDB:O82503
ProtClustDB:CLSN2685996 Genevestigator:O82503 Uniprot:O82503
Length = 287
Score = 132 (51.5 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 70 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
K++GV +P G+W A+I + + RVWLGTF+ EEAA YD AA + RG +A NF
Sbjct: 86 KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNF 142
>TAIR|locus:2155680 [details] [associations]
symbol:AIL7 "AINTEGUMENTA-like 7" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0060771 "phyllotactic
patterning" evidence=IGI] [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IGI] [GO:0009887 "organ morphogenesis"
evidence=ISS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010492 HOGENOM:HOG000239258 KO:K09285 GO:GO:0060771
EMBL:AB026639 EMBL:AY560887 IPI:IPI00522908 RefSeq:NP_201354.5
UniGene:At.50720 ProteinModelPortal:Q6J9N8 SMR:Q6J9N8
EnsemblPlants:AT5G65510.1 GeneID:836677 KEGG:ath:AT5G65510
TAIR:At5g65510 eggNOG:NOG295896 InParanoid:Q6J9N8 OMA:HVVESST
Genevestigator:Q6J9N8 Uniprot:Q6J9N8
Length = 498
Score = 136 (52.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 68 SSKYKGVVPQ-PNGRWGAQI--YEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
+S Y+GV GRW A+I ++ ++LGTF EEEAA AYDIAA +FRG +AVTNF
Sbjct: 331 ASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNF 390
Query: 125 K 125
+
Sbjct: 391 E 391
>TAIR|locus:2201103 [details] [associations]
symbol:DREB26 "dehydration response element-binding
protein 26" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP] [GO:0034605
"cellular response to heat" evidence=IEP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0071497 "cellular response to freezing" evidence=IEP]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0034605
GO:GO:0009753 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009751 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 HOGENOM:HOG000237624 GO:GO:0071497 EMBL:AC013482
EMBL:AK176679 EMBL:BT024616 EMBL:AY085925 IPI:IPI00521591
PIR:D86352 RefSeq:NP_173609.1 UniGene:At.41636
ProteinModelPortal:Q9SFE4 SMR:Q9SFE4 STRING:Q9SFE4 PaxDb:Q9SFE4
PRIDE:Q9SFE4 EnsemblPlants:AT1G21910.1 GeneID:838793
KEGG:ath:AT1G21910 TAIR:At1g21910 eggNOG:NOG318827
InParanoid:Q9SFE4 OMA:YEDADIP PhylomeDB:Q9SFE4
ProtClustDB:CLSN2714459 Genevestigator:Q9SFE4 Uniprot:Q9SFE4
Length = 230
Score = 129 (50.5 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 46 SGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFNEEEE 103
S +SS S + + +++K KYKGV + G W ++I +Q R+WLG+++ E
Sbjct: 25 SSSSSSSSSSSSSCKNKNKKSKIKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEA 84
Query: 104 AARAYDIAAQRFRGRDAVTNFKQISCAGTSSDDGDIEMAFLSSHS 148
AARAYD+A +G A NF S + D+ E LS S
Sbjct: 85 AARAYDVALLCLKGPQANLNFPTSSSSHHLLDNLLDENTLLSPKS 129
>TAIR|locus:2137559 [details] [associations]
symbol:ANT "AINTEGUMENTA" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0042127 "regulation of
cell proliferation" evidence=RCA;IMP] [GO:0010492 "maintenance of
shoot apical meristem identity" evidence=IGI] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=IMP;RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0007276 "gamete generation"
evidence=IMP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709 EMBL:AL161592
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0042127
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009908 GO:GO:0010492
HOGENOM:HOG000239258 KO:K09285 EMBL:U40256 EMBL:U41339 EMBL:U44028
EMBL:AR316367 EMBL:AY080706 EMBL:AY117207 IPI:IPI00532315
PIR:S71365 RefSeq:NP_195489.1 UniGene:At.1556
ProteinModelPortal:Q38914 SMR:Q38914 STRING:Q38914 PaxDb:Q38914
PRIDE:Q38914 EnsemblPlants:AT4G37750.1 GeneID:829931
KEGG:ath:AT4G37750 GeneFarm:5116 TAIR:At4g37750 eggNOG:NOG313785
InParanoid:Q38914 OMA:NTTHEPN PhylomeDB:Q38914
ProtClustDB:CLSN2916050 Genevestigator:Q38914 GermOnline:AT4G37750
Uniprot:Q38914
Length = 555
Score = 136 (52.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 68 SSKYKGVVPQ-PNGRWGAQI--YEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
+S Y+GV +GRW A+I ++ ++LGTF +EEAA AYD+AA +FRG +AVTNF
Sbjct: 383 ASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDVAAIKFRGTNAVTNF 442
>TAIR|locus:2027171 [details] [associations]
symbol:ORA47 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0002213 "defense response to insect"
evidence=IEP] [GO:0009611 "response to wounding" evidence=IEP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009611 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009607
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AC008263
EMBL:AC013258 HOGENOM:HOG000237624 EMBL:AY128309 EMBL:BT003348
IPI:IPI00547563 PIR:A96779 RefSeq:NP_177631.1 UniGene:At.34825
ProteinModelPortal:Q9S7L5 SMR:Q9S7L5 STRING:Q9S7L5
EnsemblPlants:AT1G74930.1 GeneID:843832 KEGG:ath:AT1G74930
TAIR:At1g74930 eggNOG:NOG268869 InParanoid:Q9S7L5 OMA:HSRERIW
PhylomeDB:Q9S7L5 ProtClustDB:CLSN2914217 Genevestigator:Q9S7L5
Uniprot:Q9S7L5
Length = 195
Score = 125 (49.1 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 69 SKYKGVVPQPNGRWGAQIYEKH--QRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
SKYKGV + G+W ++I H +R+WLG+++ E+AARA+D A RG DA NF
Sbjct: 19 SKYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAFDAAQFCLRGGDANFNF 76
>TAIR|locus:2124504 [details] [associations]
symbol:AT4G18450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0010200 "response to chitin" evidence=IEP]
[GO:0006457 "protein folding" evidence=RCA] [GO:0009408 "response
to heat" evidence=RCA] [GO:0009644 "response to high light
intensity" evidence=RCA] [GO:0042542 "response to hydrogen
peroxide" evidence=RCA] [GO:0009873 "ethylene mediated signaling
pathway" evidence=TAS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0010200 HSSP:O80337 EMBL:AL161548
EMBL:AL021710 EMBL:AY560868 IPI:IPI00543138 PIR:T04541
RefSeq:NP_193580.1 UniGene:At.32901 ProteinModelPortal:O49515
SMR:O49515 EnsemblPlants:AT4G18450.1 GeneID:827576
KEGG:ath:AT4G18450 TAIR:At4g18450 eggNOG:NOG286829
HOGENOM:HOG000241588 OMA:EWTEILD PhylomeDB:O49515
ProtClustDB:CLSN2915846 Genevestigator:O49515 Uniprot:O49515
Length = 303
Score = 131 (51.2 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 70 KYKGVVPQPNGRWGAQIYEKHQ---RVWLGTFNEEEEAARAYDIAAQRFRG-RDAVTNFK 125
KY+GV +P G++ A+I + + RVWLGTF EEAA AYD AA R RG + A TNF+
Sbjct: 109 KYRGVRKRPWGKFAAEIRDSTRNGVRVWLGTFQTAEEAAMAYDKAAVRIRGTQKAHTNFQ 168
>TAIR|locus:2202200 [details] [associations]
symbol:AT1G19210 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC069143 HOGENOM:HOG000237624 EMBL:AF332422
EMBL:BT006191 IPI:IPI00523703 PIR:F86325 RefSeq:NP_173355.3
UniGene:At.17044 ProteinModelPortal:Q84QC2 SMR:Q84QC2
EnsemblPlants:AT1G19210.1 GeneID:838504 KEGG:ath:AT1G19210
TAIR:At1g19210 eggNOG:NOG276412 InParanoid:Q84QC2 OMA:YEIRQES
PhylomeDB:Q84QC2 ProtClustDB:CLSN2918479 Genevestigator:Q84QC2
Uniprot:Q84QC2
Length = 185
Score = 123 (48.4 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 59 VEAESRKLPSSKYKGVVPQPNGRWGAQIY--EKHQRVWLGTFNEEEEAARAYDIAAQRFR 116
+E S + SKYKGV + G+W ++I +R+WLG+++ E+AARA+D A R
Sbjct: 1 MEGSSSSM-QSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLR 59
Query: 117 GRDAVTNF 124
G +A NF
Sbjct: 60 GNNAKFNF 67
>TAIR|locus:2178915 [details] [associations]
symbol:BBM "BABY BOOM" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009887 "organ
morphogenesis" evidence=ISS;IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0007275 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AL391142
HOGENOM:HOG000239258 KO:K09285 EMBL:AF317907 EMBL:AY585684
IPI:IPI00523422 PIR:T51580 RefSeq:NP_197245.2 UniGene:At.50710
ProteinModelPortal:Q6PQQ4 SMR:Q6PQQ4 STRING:Q6PQQ4
EnsemblPlants:AT5G17430.1 GeneID:831609 KEGG:ath:AT5G17430
TAIR:At5g17430 eggNOG:NOG311645 InParanoid:Q6PQQ4 OMA:EIAYNAR
PhylomeDB:Q6PQQ4 ProtClustDB:CLSN2925597 ArrayExpress:Q6PQQ4
Genevestigator:Q6PQQ4 GermOnline:AT5G17430 Uniprot:Q6PQQ4
Length = 584
Score = 135 (52.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 68 SSKYKGVVPQ-PNGRWGAQI--YEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
+S Y+GV +GRW A+I ++ ++LGTF +EEAA AYDIAA +FRG AVTNF
Sbjct: 310 ASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLSAVTNF 369
>TAIR|locus:2038500 [details] [associations]
symbol:ORA59 "octadecanoid-responsive Arabidopsis AP2/ERF
59" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009723 "response to ethylene
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0009861 "jasmonic acid and
ethylene-dependent systemic resistance" evidence=IMP] [GO:0009873
"ethylene mediated signaling pathway" evidence=RCA;TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009753 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC025290 GO:GO:0009861
HOGENOM:HOG000237624 ProtClustDB:CLSN2682286 EMBL:AK228085
EMBL:BT011001 EMBL:BT014958 IPI:IPI00523269 PIR:B86197
RefSeq:NP_172106.1 UniGene:At.42354 ProteinModelPortal:Q9LND1
SMR:Q9LND1 STRING:Q9LND1 EnsemblPlants:AT1G06160.1 GeneID:837125
KEGG:ath:AT1G06160 TAIR:At1g06160 eggNOG:NOG324429
InParanoid:Q9LND1 OMA:FAFESSI PhylomeDB:Q9LND1
Genevestigator:Q9LND1 Uniprot:Q9LND1
Length = 244
Score = 128 (50.1 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 41/128 (32%), Positives = 65/128 (50%)
Query: 49 SSVILDS--EAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYE---KHQRVWLGTFNEEEE 103
SS+I + EA V AE + Y+GV +P G++ A+I + K RVWLGTF+ E
Sbjct: 61 SSIIKEEGKEATVAAEEEE---KSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEA 117
Query: 104 AARAYDIAAQRFRGRDAVTNFKQISCAGTSSDDGDIEMAFLSSHSKSEIVDMLRKHTYND 163
AA AYD AA +G AV NF + ++ + + +S ++ + RKH+ +
Sbjct: 118 AALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNL----NDGESPVIALKRKHSMRN 173
Query: 164 ELEQSKRN 171
K++
Sbjct: 174 RPRGKKKS 181
>TAIR|locus:2204730 [details] [associations]
symbol:AT1G77640 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC010704 HOGENOM:HOG000237624
ProtClustDB:CLSN2714459 EMBL:AY560843 EMBL:BT012629 EMBL:AK176224
IPI:IPI00519885 PIR:A96806 RefSeq:NP_177887.1 UniGene:At.17793
ProteinModelPortal:Q9CAP4 SMR:Q9CAP4 PRIDE:Q9CAP4
EnsemblPlants:AT1G77640.1 GeneID:844099 KEGG:ath:AT1G77640
TAIR:At1g77640 eggNOG:NOG281332 InParanoid:Q9CAP4 OMA:FLMNIDE
PhylomeDB:Q9CAP4 Genevestigator:Q9CAP4 Uniprot:Q9CAP4
Length = 244
Score = 128 (50.1 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 37/99 (37%), Positives = 50/99 (50%)
Query: 32 IPPTKSPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQ 91
I T S SL S +SS S + + +S K KYKGV + G W +I +Q
Sbjct: 8 IQVTTSSSSLSHSSSSSSS----STSALRHQSCKNKIKKYKGVRMRSWGSWVTEIRAPNQ 63
Query: 92 --RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQIS 128
R+WLG+++ E AARAYD A +G A NF I+
Sbjct: 64 KTRIWLGSYSTAEAAARAYDAALLCLKGPKANLNFPNIT 102
>TAIR|locus:2010529 [details] [associations]
symbol:AT1G28160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC069471 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC021044 EMBL:AY560863
EMBL:DQ446295 EMBL:DQ652864 IPI:IPI00523290 PIR:E86407
RefSeq:NP_174138.1 UniGene:At.50650 ProteinModelPortal:Q9FZ90
SMR:Q9FZ90 EnsemblPlants:AT1G28160.1 GeneID:839710
KEGG:ath:AT1G28160 TAIR:At1g28160 eggNOG:NOG323238
HOGENOM:HOG000239107 InParanoid:Q9FZ90 OMA:TTKERYW PhylomeDB:Q9FZ90
ProtClustDB:CLSN2914663 Genevestigator:Q9FZ90 Uniprot:Q9FZ90
Length = 245
Score = 128 (50.1 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 30/57 (52%), Positives = 36/57 (63%)
Query: 70 KYKGVVPQPNGRWGAQIYEK--HQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
KY GV +P GR+ A+I +R WLGTF+ EEAA AYD AA+ RG A TNF
Sbjct: 38 KYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDTAEEAALAYDRAARSIRGLTARTNF 94
>TAIR|locus:2135282 [details] [associations]
symbol:AT4G39780 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL022605 EMBL:AL161595
HOGENOM:HOG000239817 EMBL:AY560850 EMBL:BT025719 IPI:IPI00529599
PIR:T05015 RefSeq:NP_195688.1 UniGene:At.2297
ProteinModelPortal:O65665 SMR:O65665 MINT:MINT-7263056 PRIDE:O65665
EnsemblPlants:AT4G39780.1 GeneID:830136 KEGG:ath:AT4G39780
TAIR:At4g39780 eggNOG:NOG292506 InParanoid:O65665 OMA:TEYQESE
PhylomeDB:O65665 ProtClustDB:CLSN2916086 Genevestigator:O65665
Uniprot:O65665
Length = 272
Score = 129 (50.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 28/58 (48%), Positives = 37/58 (63%)
Query: 71 YKGVVPQPNGRWGAQIY--EKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQ 126
Y+GV + G+W A+I + R+WLGTF+ EEAA AYD+AA + RG A NF Q
Sbjct: 93 YRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFPQ 150
>TAIR|locus:2144296 [details] [associations]
symbol:TINY2 "AT5G11590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0009873
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AL163815 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
EMBL:AY940160 EMBL:AY560851 IPI:IPI00526417 PIR:T48518
RefSeq:NP_196720.1 UniGene:At.50619 ProteinModelPortal:Q9LYD3
SMR:Q9LYD3 EnsemblPlants:AT5G11590.1 GeneID:831031
KEGG:ath:AT5G11590 TAIR:At5g11590 eggNOG:NOG295419
InParanoid:Q9LYD3 OMA:SSEDNYG PhylomeDB:Q9LYD3
ProtClustDB:CLSN2686631 Genevestigator:Q9LYD3 Uniprot:Q9LYD3
Length = 236
Score = 127 (49.8 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 71 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQIS 128
Y+GV + G+W ++I E K R+WLGTF E AARA+D+AA +G A+ NF +++
Sbjct: 51 YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELA 110
>TAIR|locus:2151591 [details] [associations]
symbol:ERF104 "ethylene response factor 104" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0050832 "defense response to fungus"
evidence=IMP] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009612 "response to mechanical stimulus" evidence=RCA]
[GO:0009693 "ethylene biosynthetic process" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0009873 GO:GO:0050832 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AB012239 HOGENOM:HOG000272710 EMBL:AF360149
EMBL:AY054228 EMBL:AY142636 EMBL:AY088694 IPI:IPI00525572
RefSeq:NP_200968.1 UniGene:At.47568 ProteinModelPortal:Q9FKG1
SMR:Q9FKG1 DIP:DIP-48849N IntAct:Q9FKG1 STRING:Q9FKG1
EnsemblPlants:AT5G61600.1 GeneID:836281 KEGG:ath:AT5G61600
TAIR:At5g61600 eggNOG:NOG328203 InParanoid:Q9FKG1 OMA:EEERHYR
PhylomeDB:Q9FKG1 ProtClustDB:CLSN2916553 Genevestigator:Q9FKG1
Uniprot:Q9FKG1
Length = 241
Score = 127 (49.8 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 71 YKGVVPQPNGRWGAQIYEKHQ---RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
Y+GV +P G++ A+I + ++ R+WLGT++ EA RAYD AA + RGR A+ NF
Sbjct: 88 YRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNF 144
>UNIPROTKB|Q5MFV1 [details] [associations]
symbol:BIERF3 "BTH-induced ERF transcriptional factor 3"
species:39946 "Oryza sativa Indica Group" [GO:0009620 "response to
fungus" evidence=IC] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009620 EMBL:AY831394
ProteinModelPortal:Q5MFV1 KEGG:dosa:Os02t0654700-01 Gramene:Q5MFV1
Uniprot:Q5MFV1
Length = 303
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 71 YKGVVPQPNGRWGAQIYEKHQ---RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
Y+GV +P G++ A+I + + RVWLGTF+ EEAA AYD AA R RG A+ NF
Sbjct: 149 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFDSAEEAAVAYDRAAYRMRGSRALLNF 205
>TAIR|locus:2056048 [details] [associations]
symbol:SNZ "SCHNARCHZAPFEN" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=ISS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PROSITE:PS51032
SMART:SM00380 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC004697 Gene3D:3.30.730.10 SUPFAM:SSF54171
HOGENOM:HOG000293136 ProtClustDB:CLSN2681587 EMBL:AY576276
EMBL:AY062578 EMBL:AY093386 IPI:IPI00534560 IPI:IPI00866782
PIR:T02577 RefSeq:NP_850313.2 UniGene:At.27296
ProteinModelPortal:Q6PV67 SMR:Q6PV67 IntAct:Q6PV67 PaxDb:Q6PV67
PRIDE:Q6PV67 EnsemblPlants:AT2G39250.1 GeneID:818510
KEGG:ath:AT2G39250 TAIR:At2g39250 eggNOG:NOG298400
InParanoid:Q6PV67 OMA:THNEDED PhylomeDB:Q6PV67
Genevestigator:Q6PV67 Uniprot:Q6PV67
Length = 325
Score = 129 (50.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 49/144 (34%), Positives = 71/144 (49%)
Query: 24 PPITFPASIPPTKSPESLCRVGS---GASSVILDSEAGV--EAESRKLP---SSKYKGVV 75
PP P PP S L G+ SS+ + + + + +SR+ P SS Y+GV
Sbjct: 57 PP---PPPPPPPPSENELSGPGNEWLDLSSMQRNKQETLVMKKKSRRGPRSRSSHYRGVT 113
Query: 76 -PQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQISCAGTSS 134
+ GRW + I++ ++V+LG F+ AARAYD AA RFRG A NF
Sbjct: 114 FYRRTGRWESHIWDCGKQVYLGGFDTAYTAARAYDRAAIRFRGLQADINF--------IV 165
Query: 135 DDGDIEMAFLSSHSKSEIVDMLRK 158
DD ++ + + SK E V LR+
Sbjct: 166 DDYKQDIEKMKNLSKEEFVQSLRR 189
>TAIR|locus:2005490 [details] [associations]
symbol:ABI4 "ABA INSENSITIVE 4" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009747
"hexokinase-dependent signaling" evidence=NAS] [GO:0006970
"response to osmotic stress" evidence=IMP] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IMP] [GO:0009749
"response to glucose stimulus" evidence=IMP] [GO:0010896
"regulation of triglyceride catabolic process" evidence=IMP]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA;TAS]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0005983 "starch catabolic process" evidence=NAS] [GO:0010353
"response to trehalose stimulus" evidence=IMP] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IDA;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IPI]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0032880 "regulation of protein
localization" evidence=IDA] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0010449 "root meristem growth" evidence=IMP]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0009933
"meristem structural organization" evidence=RCA] [GO:0010162 "seed
dormancy process" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0019915
"lipid storage" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=IEP] [GO:0048316 "seed development" evidence=IMP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 GO:GO:0045893
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0009738
GO:GO:0009873 GO:GO:0009414 GO:GO:0009749 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0032880 GO:GO:0006351
GO:GO:0048527 GO:GO:0010182 GO:GO:0006970 GO:GO:0031930
EMBL:AF040959 EMBL:AF085279 EMBL:AY560890 EMBL:DQ446612
EMBL:DQ653050 IPI:IPI00530730 PIR:G84826 RefSeq:NP_181551.1
UniGene:At.50594 ProteinModelPortal:A0MES8 SMR:A0MES8 STRING:A0MES8
EnsemblPlants:AT2G40220.1 GeneID:818614 KEGG:ath:AT2G40220
TAIR:At2g40220 eggNOG:NOG282672 HOGENOM:HOG000033770
InParanoid:A0MES8 KO:K09286 OMA:STSFHHE PhylomeDB:A0MES8
ProtClustDB:CLSN2913058 Genevestigator:A0MES8 GO:GO:0044212
GO:GO:0010896 GO:GO:0010353 GO:GO:0010449 GO:GO:0048316
GO:GO:0005983 Gene3D:3.30.730.10 SUPFAM:SSF54171 Uniprot:A0MES8
Length = 328
Score = 129 (50.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 34/83 (40%), Positives = 42/83 (50%)
Query: 70 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQI 127
+Y+GV + G+W A+I E K R WLGTF E+AARAYD AA G A N
Sbjct: 54 RYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNLTPS 113
Query: 128 SCAGTSSDDGDIEMAFLSSHSKS 150
S + SS + A S S S
Sbjct: 114 SPSSVSSSSSSVSAASSPSTSSS 136
>TAIR|locus:2062954 [details] [associations]
symbol:CRF5 "AT2G46310" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IGI] [GO:0042991 "transcription factor import into
nucleus" evidence=RCA;IDA] [GO:0048366 "leaf development"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
GO:GO:0009736 GO:GO:0048366 EMBL:AC005397 GO:GO:0048825
GO:GO:0042991 HOGENOM:HOG000237664 EMBL:AY074638 EMBL:BT003121
EMBL:AK227661 IPI:IPI00528508 PIR:C84901 RefSeq:NP_182154.1
UniGene:At.37025 ProteinModelPortal:O82339 SMR:O82339 IntAct:O82339
EnsemblPlants:AT2G46310.1 GeneID:819239 KEGG:ath:AT2G46310
TAIR:At2g46310 eggNOG:NOG253877 InParanoid:O82339 OMA:SHNDETE
PhylomeDB:O82339 ProtClustDB:CLSN2683458 Genevestigator:O82339
Uniprot:O82339
Length = 294
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 28/57 (49%), Positives = 37/57 (64%)
Query: 70 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
KY+GV +P G++ A+I + R+WLGTF EEAA YD AA R +G +A TNF
Sbjct: 98 KYRGVRQRPWGKFAAEIRDPSSRTRLWLGTFATAEEAAIGYDRAAIRIKGHNAQTNF 154
>TAIR|locus:2158123 [details] [associations]
symbol:AT5G67010 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB026640 HOGENOM:HOG000112333
ProtClustDB:CLSN2683315 IPI:IPI00537557 RefSeq:NP_201502.1
UniGene:At.65709 ProteinModelPortal:Q9FGC9 SMR:Q9FGC9
EnsemblPlants:AT5G67010.1 GeneID:836836 KEGG:ath:AT5G67010
TAIR:At5g67010 eggNOG:NOG312693 OMA:ISNTGGD PhylomeDB:Q9FGC9
Genevestigator:Q9FGC9 Uniprot:Q9FGC9
Length = 162
Score = 115 (45.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 33/85 (38%), Positives = 45/85 (52%)
Query: 31 SIPPTKS-PESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEK 89
++PP+ + P LC V S E E + K K+KGV +P+G+W A+I++
Sbjct: 56 ALPPSDAGPCPLCGVTSCYGCAFPQHE---EIKQEK----KHKGVRKKPSGKWSAEIWDP 108
Query: 90 HQRV--WLGTFNEEEEAARAYDIAA 112
R WLGTF E AA AYD AA
Sbjct: 109 STRTRRWLGTFPTAEMAADAYDEAA 133
>TAIR|locus:2159068 [details] [associations]
symbol:LEP "LEAFY PETIOLE" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009739 "response to gibberellin stimulus"
evidence=IMP] [GO:0010030 "positive regulation of seed germination"
evidence=IMP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0010030 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009739 HSSP:O80337
EMBL:AB005230 HOGENOM:HOG000239107 GO:GO:0009740 EMBL:AF216581
EMBL:AY560852 EMBL:BT024919 IPI:IPI00530212 RefSeq:NP_196895.1
UniGene:At.64231 ProteinModelPortal:Q9M644 SMR:Q9M644
EnsemblPlants:AT5G13910.1 GeneID:831238 KEGG:ath:AT5G13910
TAIR:At5g13910 eggNOG:NOG306571 InParanoid:Q9M644 OMA:GSRARTN
PhylomeDB:Q9M644 ProtClustDB:CLSN2916620 Genevestigator:Q9M644
Uniprot:Q9M644
Length = 211
Score = 122 (48.0 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 69 SKYKGVVPQPNGRWGAQIYEK--HQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
+++ GV +P GR+ A+I + +R WLGTF+ EEAA AYD AA+ RG A TNF
Sbjct: 18 TRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYDRAARSMRGTRARTNF 75
>TAIR|locus:2014185 [details] [associations]
symbol:AT1G64380 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 HSSP:O80337
EMBL:AY560876 EMBL:AC066689 EMBL:AK228763 IPI:IPI00537541
PIR:H96667 RefSeq:NP_176620.1 UniGene:At.36008 UniGene:At.67835
ProteinModelPortal:Q9C7W2 SMR:Q9C7W2 EnsemblPlants:AT1G64380.1
GeneID:842745 KEGG:ath:AT1G64380 TAIR:At1g64380 eggNOG:NOG272521
HOGENOM:HOG000241606 InParanoid:Q9C7W2 OMA:CPLERMP PhylomeDB:Q9C7W2
ProtClustDB:CLSN2679299 Genevestigator:Q9C7W2 Uniprot:Q9C7W2
Length = 335
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 37/108 (34%), Positives = 57/108 (52%)
Query: 24 PPITFPASIPPTKSPESLCRV--GSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGR 81
PP+ F ++ ++ E + + GS A++ AG + +KL Y+GV + G+
Sbjct: 92 PPL-FSSTYDHHQTSELMLQAAAGSPAAAFAAALAAGRVTKKKKL----YRGVRQRHWGK 146
Query: 82 WGAQIY--EKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQI 127
W A+I + RVWLGT++ E AA AYD AA + RG A NF +
Sbjct: 147 WVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNL 194
>TAIR|locus:2171840 [details] [associations]
symbol:AT5G65130 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB013395 HOGENOM:HOG000239817
EMBL:AY560858 EMBL:DQ447109 EMBL:DQ653392 EMBL:BT025723
IPI:IPI00516764 RefSeq:NP_201318.1 UniGene:At.50719
ProteinModelPortal:Q9FJQ2 SMR:Q9FJQ2 IntAct:Q9FJQ2 PaxDb:Q9FJQ2
PRIDE:Q9FJQ2 EnsemblPlants:AT5G65130.1 GeneID:836637
KEGG:ath:AT5G65130 TAIR:At5g65130 eggNOG:NOG331618
InParanoid:Q9FJQ2 OMA:ILQIQTE PhylomeDB:Q9FJQ2
ProtClustDB:CLSN2916268 Genevestigator:Q9FJQ2 Uniprot:Q9FJQ2
Length = 277
Score = 125 (49.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 67 PSSKYKGVVPQPNGRWGAQIY--EKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
P Y+GV + G+W A+I + R+WLGTF +EAA AYD AA + RG +A NF
Sbjct: 107 PVKLYRGVRQRQWGKWVAEIRLPKNRTRLWLGTFETAQEAALAYDQAAHKIRGDNARLNF 166
Query: 125 KQI 127
I
Sbjct: 167 PDI 169
>TAIR|locus:2005704 [details] [associations]
symbol:AT1G75490 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006950 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010200 EMBL:AC006434 EMBL:AK175902 IPI:IPI00536836
RefSeq:NP_177681.2 UniGene:At.34770 UniGene:At.74106
ProteinModelPortal:Q9LQZ2 SMR:Q9LQZ2 PaxDb:Q9LQZ2 PRIDE:Q9LQZ2
EnsemblPlants:AT1G75490.1 GeneID:843885 KEGG:ath:AT1G75490
GeneFarm:3662 TAIR:At1g75490 eggNOG:NOG311950 HOGENOM:HOG000033697
InParanoid:Q9LQZ2 OMA:ISWEHIN PhylomeDB:Q9LQZ2
ProtClustDB:CLSN2714736 Genevestigator:Q9LQZ2 GermOnline:AT1G75490
Uniprot:Q9LQZ2
Length = 206
Score = 121 (47.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 68 SSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFK 125
S YKGV + G+W A+I E ++ R+WLGTF+ EAA AYD AA++ G +A N
Sbjct: 39 SCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAALAYDSAARKLYGPEAHLNLP 98
Query: 126 Q 126
+
Sbjct: 99 E 99
>TAIR|locus:2129106 [details] [associations]
symbol:ERF6 "AT4G17490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0009873 "ethylene mediated signaling pathway"
evidence=RCA;TAS] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0000302 "response to reactive oxygen species"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009644 "response to high light intensity" evidence=IMP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0010200 EMBL:Z97343 EMBL:AL161546
HOGENOM:HOG000272710 ProtClustDB:CLSN2689485 EMBL:AB008316
EMBL:AB013301 EMBL:AY065155 EMBL:AY114588 IPI:IPI00547267
PIR:E71444 PIR:T52189 RefSeq:NP_567529.1 UniGene:At.24407
UniGene:At.71513 ProteinModelPortal:Q8VZ91 SMR:Q8VZ91 STRING:Q8VZ91
PaxDb:Q8VZ91 PRIDE:Q8VZ91 EnsemblPlants:AT4G17490.1 GeneID:827463
KEGG:ath:AT4G17490 GeneFarm:4729 TAIR:At4g17490 eggNOG:NOG274811
InParanoid:Q8VZ91 OMA:KWIQFAT PhylomeDB:Q8VZ91
Genevestigator:Q8VZ91 GermOnline:AT4G17490 Uniprot:Q8VZ91
Length = 282
Score = 125 (49.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 71 YKGVVPQPNGRWGAQIYE---KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFK-Q 126
Y+GV +P G++ A+I + + RVWLGTF EAARAYD A R RG A+ NF +
Sbjct: 137 YRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPLE 196
Query: 127 ISCAGTSSDDG 137
+ ++DG
Sbjct: 197 VDKWNPRAEDG 207
>TAIR|locus:2015168 [details] [associations]
symbol:ddf2 "DWARF AND DELAYED FLOWERING 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010371 "regulation of gibberellin biosynthetic
process" evidence=IMP] [GO:0016049 "cell growth" evidence=IMP]
[GO:0048510 "regulation of timing of transition from vegetative to
reproductive phase" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
EMBL:AC011000 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048510
GO:GO:0010371 HOGENOM:HOG000237624 EMBL:AY560841 EMBL:AC010795
EMBL:AK175951 EMBL:BT021917 EMBL:BT025742 IPI:IPI00522795
PIR:E96655 RefSeq:NP_001077764.1 RefSeq:NP_176491.1
UniGene:At.49508 ProteinModelPortal:Q9SGJ6 SMR:Q9SGJ6 STRING:Q9SGJ6
EnsemblPlants:AT1G63030.1 EnsemblPlants:AT1G63030.2 GeneID:842606
KEGG:ath:AT1G63030 GeneFarm:3602 TAIR:At1g63030 eggNOG:NOG293635
InParanoid:Q9SGJ6 OMA:MENDDIT PhylomeDB:Q9SGJ6
ProtClustDB:CLSN2682371 Genevestigator:Q9SGJ6 GermOnline:AT1G63030
Uniprot:Q9SGJ6
Length = 181
Score = 118 (46.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 71 YKGVVPQPNGRWGAQIYEK-HQR-VWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
Y+GV + +W ++ E HQR VWLGT+ + AARA+D+A RGR A NF
Sbjct: 30 YRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTADMAARAHDVAVLALRGRSACLNF 85
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 39/122 (31%), Positives = 57/122 (46%)
Query: 207 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSGSTSKGLLLNFEDVTGKVWRFRYSYWNS 265
F K +T SDV L+IPKQ+A + FP L L +D+ G+ W F++ + +
Sbjct: 124 FSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGT 183
Query: 266 SQSYVLTKG--WSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDW-KARTGPIENPVEPVQM 322
Q ++ T G WS F K L GDI R G+ + I K + G I + V
Sbjct: 184 PQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANC 243
Query: 323 MR 324
M+
Sbjct: 244 MQ 245
>TAIR|locus:2082732 [details] [associations]
symbol:SMZ "SCHLAFMUTZE" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009658 "chloroplast
organization" evidence=IMP] [GO:0007275 "multicellular organismal
development" evidence=ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL049655 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009658
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AY576275 EMBL:AY560886
EMBL:BT026352 IPI:IPI00547287 IPI:IPI00846149 PIR:T06721
RefSeq:NP_001078290.1 RefSeq:NP_191059.2 UniGene:At.50279
ProteinModelPortal:Q6PV68 SMR:Q6PV68 STRING:Q6PV68
EnsemblPlants:AT3G54990.1 GeneID:824664 KEGG:ath:AT3G54990
TAIR:At3g54990 eggNOG:NOG270704 HOGENOM:HOG000293136
InParanoid:Q6PV68 OMA:DADINFV PhylomeDB:Q6PV68
ProtClustDB:CLSN2681587 ArrayExpress:Q6PV68 Genevestigator:Q6PV68
Uniprot:Q6PV68
Length = 346
Score = 126 (49.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 31/67 (46%), Positives = 44/67 (65%)
Query: 62 ESRKLP---SSKYKGVV-PQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRG 117
+SR+ P SS+Y+GV + GRW + I++ ++V+LG F+ AARAYD AA +FRG
Sbjct: 111 KSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAYAAARAYDRAAIKFRG 170
Query: 118 RDAVTNF 124
DA NF
Sbjct: 171 LDADINF 177
>TAIR|locus:2015061 [details] [associations]
symbol:AT1G22190 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006970 "response to osmotic stress" evidence=IEP] [GO:0009409
"response to cold" evidence=IEP] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0009409 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0006970 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 HOGENOM:HOG000239817 EMBL:AC073942 EMBL:BT000907
IPI:IPI00529569 PIR:E86354 RefSeq:NP_173638.1 UniGene:At.25524
UniGene:At.26676 UniGene:At.70046 ProteinModelPortal:Q9LM15
SMR:Q9LM15 MINT:MINT-7262777 STRING:Q9LM15 PaxDb:Q9LM15
PRIDE:Q9LM15 EnsemblPlants:AT1G22190.1 GeneID:838824
KEGG:ath:AT1G22190 TAIR:At1g22190 eggNOG:NOG261785
InParanoid:Q9LM15 OMA:QAICATI PhylomeDB:Q9LM15
ProtClustDB:CLSN2914396 Genevestigator:Q9LM15 Uniprot:Q9LM15
Length = 261
Score = 123 (48.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 67 PSSKYKGVVPQPNGRWGAQIY--EKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
P+ Y+GV + G+W A+I R+WLGTF+ EEAA AYD AA + RG A NF
Sbjct: 79 PTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNF 138
Query: 125 KQI 127
+
Sbjct: 139 PDL 141
>TAIR|locus:2123708 [details] [associations]
symbol:AT4G28140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010200 HSSP:O80337 EMBL:AL161572 HOGENOM:HOG000112388
EMBL:DQ011579 EMBL:AY074574 EMBL:AY097394 IPI:IPI00520768
PIR:T09030 RefSeq:NP_194543.1 UniGene:At.32043 UniGene:At.72101
ProteinModelPortal:Q9M0J3 SMR:Q9M0J3 PRIDE:Q9M0J3
EnsemblPlants:AT4G28140.1 GeneID:828929 KEGG:ath:AT4G28140
TAIR:At4g28140 eggNOG:NOG269342 InParanoid:Q9M0J3 OMA:DQKEPET
PhylomeDB:Q9M0J3 ProtClustDB:CLSN2915905 Genevestigator:Q9M0J3
Uniprot:Q9M0J3
Length = 292
Score = 124 (48.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 28/69 (40%), Positives = 39/69 (56%)
Query: 60 EAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQR--VWLGTFNEEEEAARAYDIAAQRFRG 117
EA + + Y+GV + G+W A+I + R +WLGTF+ EEAA AYD A + RG
Sbjct: 132 EAVQPYIATKLYRGVRQRQWGKWVAEIRKPRSRARLWLGTFDTAEEAAMAYDRQAFKLRG 191
Query: 118 RDAVTNFKQ 126
A NF +
Sbjct: 192 HSATLNFPE 200
>TAIR|locus:2042496 [details] [associations]
symbol:ERF15 "ethylene-responsive element binding factor
15" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0010200 "response to chitin" evidence=IEP]
[GO:0009873 "ethylene mediated signaling pathway" evidence=RCA;TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0010200 EMBL:AC006593 HOGENOM:HOG000237624
EMBL:AY070443 EMBL:AY096563 IPI:IPI00528983 PIR:B84718
RefSeq:NP_850162.1 UniGene:At.28356 ProteinModelPortal:Q8VYM0
SMR:Q8VYM0 EnsemblPlants:AT2G31230.1 GeneID:817680
KEGG:ath:AT2G31230 TAIR:At2g31230 eggNOG:NOG236239
InParanoid:Q8VYM0 OMA:ESPEMMI PhylomeDB:Q8VYM0
ProtClustDB:CLSN2682286 Genevestigator:Q8VYM0 GermOnline:AT2G31230
Uniprot:Q8VYM0
Length = 243
Score = 122 (48.0 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 43/143 (30%), Positives = 73/143 (51%)
Query: 36 KSPESLCR--VGSG-ASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQ- 91
+SPE + + + +G S+ + + G++ E Y+GV +P G++ A+I + +
Sbjct: 54 ESPEMMIKEEIQNGDVSNSEEEEKVGIDEER------SYRGVRKRPWGKFAAEIRDSTRN 107
Query: 92 --RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQISCAGTSSDDGDIEMAFLSSHSK 149
RVWLGTF++ EEAA AYD AA +G A NF + S +M ++ H
Sbjct: 108 GIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNFP-VEVVRESLK----KMENVNLHDG 162
Query: 150 -SEIVDMLRKHTYNDELEQSKRN 171
S ++ + RKH+ + KR+
Sbjct: 163 GSPVMALKRKHSLRNRPRGKKRS 185
>TAIR|locus:2055002 [details] [associations]
symbol:ERF13 "ethylene-responsive element binding factor
13" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0002679 "respiratory
burst involved in defense response" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0007165 "signal
transduction" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009873 "ethylene
mediated signaling pathway" evidence=RCA;TAS] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=RCA]
[GO:0043069 "negative regulation of programmed cell death"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0010200 EMBL:AC002388 HOGENOM:HOG000239314
EMBL:AF325089 EMBL:AF370540 EMBL:AY072471 EMBL:AY088387
IPI:IPI00525442 PIR:T00409 RefSeq:NP_182011.1 UniGene:At.29014
ProteinModelPortal:Q8L9K1 SMR:Q8L9K1 STRING:Q8L9K1
EnsemblPlants:AT2G44840.1 GeneID:819093 KEGG:ath:AT2G44840
TAIR:At2g44840 eggNOG:NOG314595 InParanoid:Q8L9K1 OMA:EQKRESH
PhylomeDB:Q8L9K1 ProtClustDB:CLSN2913027 Genevestigator:Q8L9K1
GermOnline:AT2G44840 Uniprot:Q8L9K1
Length = 226
Score = 121 (47.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/104 (35%), Positives = 54/104 (51%)
Query: 31 SIPPTKSPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKH 90
S+PP SP + + +S G A +K +Y+GV +P G++ A+I +
Sbjct: 61 SVPPVTSPAEENKPPATKAS-------GSHAPRQK--GMQYRGVRRRPWGKFAAEIRDPK 111
Query: 91 Q---RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQI--SC 129
+ RVWLGT+ E+AA AYD AA + RG A NF + SC
Sbjct: 112 KNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPHLIGSC 155
>TAIR|locus:2194819 [details] [associations]
symbol:AT1G44830 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:1900030 "regulation of pectin biosynthetic
process" evidence=IMP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
ProtClustDB:CLSN2714459 EMBL:AY560839 EMBL:AC020576 EMBL:BT025270
EMBL:AK175503 IPI:IPI00520360 PIR:D96507 RefSeq:NP_175104.1
UniGene:At.50652 ProteinModelPortal:Q9LPE8 SMR:Q9LPE8
EnsemblPlants:AT1G44830.1 GeneID:841047 KEGG:ath:AT1G44830
TAIR:At1g44830 eggNOG:NOG243601 InParanoid:Q9LPE8 OMA:LSESSSW
PhylomeDB:Q9LPE8 Genevestigator:Q9LPE8 GO:GO:1900030 Uniprot:Q9LPE8
Length = 211
Score = 120 (47.3 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 35/96 (36%), Positives = 51/96 (53%)
Query: 36 KSPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RV 93
K+P+ R+ S +SS S + S + KYKGV + G W ++I +Q R+
Sbjct: 7 KTPK---RMSSPSSS----SSSSSSTSSSSIRMKKYKGVRMRSWGSWVSEIRAPNQKTRI 59
Query: 94 WLGTFNEEEEAARAYDIAAQRFRGRDAVT-NFKQIS 128
WLG+++ E AARAYD A +G A NF +IS
Sbjct: 60 WLGSYSTAEAAARAYDAALLCLKGSSANNLNFPEIS 95
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 129 (50.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 31/94 (32%), Positives = 45/94 (47%)
Query: 207 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSGSTSKGLLLNFEDVTGKVWRFRYSYWNS 265
F K +T SD + ++HA + P L + L EDV G W+F++ +
Sbjct: 116 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQ 175
Query: 266 SQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGD 299
+ ++LT GWS FV K L AGD F R G+
Sbjct: 176 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 209
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 131 (51.2 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 41/121 (33%), Positives = 52/121 (42%)
Query: 196 SDRVLKARDQ---LFEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSGSTSKGLLLNFEDV 251
SD LK Q F K +T SD +P++ AEK FP L + +D+
Sbjct: 112 SDMGLKLNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDL 171
Query: 252 TGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTG 311
W FR+ Y + ++LT GWS FV K L AGD V F R L I R
Sbjct: 172 HDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQT 231
Query: 312 P 312
P
Sbjct: 232 P 232
>TAIR|locus:2076765 [details] [associations]
symbol:ARF18 "auxin response factor 18" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132959 HOGENOM:HOG000241141 EMBL:AF334717
EMBL:AY059746 EMBL:AY070463 EMBL:AY091392 EMBL:AK229945
IPI:IPI00524053 PIR:T47975 RefSeq:NP_567119.1 UniGene:At.17167
UniGene:At.69165 ProteinModelPortal:Q9C5W9 SMR:Q9C5W9 IntAct:Q9C5W9
EnsemblPlants:AT3G61830.1 GeneID:825356 KEGG:ath:AT3G61830
GeneFarm:3414 TAIR:At3g61830 eggNOG:NOG268528 InParanoid:Q9C5W9
OMA:RISQFIV PhylomeDB:Q9C5W9 ProtClustDB:CLSN2917487
Genevestigator:Q9C5W9 GermOnline:AT3G61830 Uniprot:Q9C5W9
Length = 602
Score = 128 (50.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 33/104 (31%), Positives = 49/104 (47%)
Query: 207 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSGSTSKGLLLNFEDVTGKVWRFRYSYWNS 265
F K +T SD + ++HA + P L + L D+ G WRF++ +
Sbjct: 128 FVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQ 187
Query: 266 SQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKAR 309
+ ++LT GWS FV K L AGD F R GD ++ + AR
Sbjct: 188 PRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLAR 231
>TAIR|locus:2152642 [details] [associations]
symbol:ARF8 "auxin response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009908
"flower development" evidence=IGI] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009886 "post-embryonic
morphogenesis" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009908 HOGENOM:HOG000241141
ProtClustDB:CLSN2686713 EMBL:AF042196 EMBL:AY669790 EMBL:AB024026
IPI:IPI00525703 IPI:IPI00846789 RefSeq:NP_001078672.1
RefSeq:NP_198518.1 UniGene:At.23446 ProteinModelPortal:Q9FGV1
SMR:Q9FGV1 IntAct:Q9FGV1 STRING:Q9FGV1 PaxDb:Q9FGV1 PRIDE:Q9FGV1
EnsemblPlants:AT5G37020.1 GeneID:833672 KEGG:ath:AT5G37020
GeneFarm:3372 TAIR:At5g37020 eggNOG:NOG292968 InParanoid:Q9FGV1
OMA:NDAYLPA PhylomeDB:Q9FGV1 Genevestigator:Q9FGV1
GermOnline:AT5G37020 Uniprot:Q9FGV1
Length = 811
Score = 129 (50.5 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 37/113 (32%), Positives = 52/113 (46%)
Query: 201 KARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSGSTSKGLLLNFEDVTGKVWRFR 259
K F K +T SD +P++ AEK FP L L D+ W+FR
Sbjct: 120 KQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFR 179
Query: 260 YSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGP 312
+ + + ++LT GWS FV K L AGD V F R+ QL++ + T P
Sbjct: 180 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNE--KNQLFLGIRHATRP 230
>TAIR|locus:2076621 [details] [associations]
symbol:AT3G57600 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010093 "specification of floral organ
identity" evidence=RCA] [GO:0048440 "carpel development"
evidence=RCA] [GO:0048507 "meristem development" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006950 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AL049660
EMBL:AY087243 EMBL:AK227217 EMBL:BT028945 IPI:IPI00530394
PIR:T06760 RefSeq:NP_191319.1 UniGene:At.34819
ProteinModelPortal:Q9SVX5 SMR:Q9SVX5 EnsemblPlants:AT3G57600.1
GeneID:824929 KEGG:ath:AT3G57600 GeneFarm:3672 TAIR:At3g57600
eggNOG:NOG289602 HOGENOM:HOG000239781 InParanoid:Q9SVX5 OMA:ARLWLGS
PhylomeDB:Q9SVX5 ProtClustDB:CLSN2684573 Genevestigator:Q9SVX5
GermOnline:AT3G57600 Uniprot:Q9SVX5
Length = 277
Score = 122 (48.0 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 70 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQI 127
+Y+GV + G+W A+I E K R+WLG+F EEAA AYD AA + G DA N +
Sbjct: 27 QYRGVRQRTWGKWVAEIREPKKRARLWLGSFATAEEAAMAYDEAALKLYGHDAYLNLPHL 86
>TAIR|locus:2012653 [details] [associations]
symbol:AT1G33760 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624 EMBL:AY560838
EMBL:AC010164 EMBL:BT015928 EMBL:BT020566 IPI:IPI00520537
PIR:A86461 RefSeq:NP_174636.1 UniGene:At.39878
ProteinModelPortal:Q9LQ28 SMR:Q9LQ28 EnsemblPlants:AT1G33760.1
GeneID:840267 KEGG:ath:AT1G33760 TAIR:At1g33760 eggNOG:NOG312231
InParanoid:Q9LQ28 OMA:FPRPESS PhylomeDB:Q9LQ28
ProtClustDB:CLSN2914626 Genevestigator:Q9LQ28 Uniprot:Q9LQ28
Length = 184
Score = 116 (45.9 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 71 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQI 127
Y+G+ + G+W ++I E K R+WLG++ E AA AYD AA RGR NF ++
Sbjct: 20 YRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPEL 78
>TAIR|locus:2030477 [details] [associations]
symbol:AT1G20600 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016020 "membrane" evidence=IDA]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0016020
GO:GO:0006355 GO:GO:0003677 EMBL:AC027665 EMBL:AC069251
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HSSP:Q9ZWM9 IPI:IPI00528428 RefSeq:NP_173484.1
UniGene:At.51694 ProteinModelPortal:Q9LM90 SMR:Q9LM90
EnsemblPlants:AT1G20600.1 GeneID:838649 KEGG:ath:AT1G20600
TAIR:At1g20600 eggNOG:NOG309577 HOGENOM:HOG000154970 OMA:IETRNIC
PhylomeDB:Q9LM90 ProtClustDB:CLSN2679416 Genevestigator:Q9LM90
Uniprot:Q9LM90
Length = 237
Score = 120 (47.3 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 194 FGSDRVLKARDQLFEKAVTPSDVGK-LNRLVIPKQHA-EKHFPL--QSGSTSKGLLLNFE 249
FG D V + + +K + SDV +RL++ K+ EK P +S KG+ ++
Sbjct: 112 FGDDEVTRRFSRPIKKQLMSSDVDTDQSRLMLSKEQVKEKMLPFLEESEDPVKGVDVSVY 171
Query: 250 DVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL-KAGDIVS 291
G+V + ++ WN ++ VLT GW +FV + L K D V+
Sbjct: 172 GPDGEVQQMKFKMWNGDKTPVLTSGWMQFVADYGLLKTSDFVT 214
>TAIR|locus:2055007 [details] [associations]
symbol:AT2G44940 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC002388 HOGENOM:HOG000237624
EMBL:BT008564 EMBL:BT008677 EMBL:AK229616 EMBL:AY087052
IPI:IPI00533012 PIR:T00399 RefSeq:NP_182021.1 UniGene:At.14592
ProteinModelPortal:Q8LBQ7 SMR:Q8LBQ7 EnsemblPlants:AT2G44940.1
GeneID:819103 KEGG:ath:AT2G44940 GeneFarm:2901 TAIR:At2g44940
eggNOG:NOG294541 InParanoid:Q8LBQ7 OMA:DENEMMI PhylomeDB:Q8LBQ7
ProtClustDB:CLSN2913029 Genevestigator:Q8LBQ7 Uniprot:Q8LBQ7
Length = 295
Score = 121 (47.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 71 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQIS 128
Y+GV + G+W ++I E K R+WLGT+ E AARA+D+AA +G A NF +++
Sbjct: 100 YRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLA 159
>TAIR|locus:2039124 [details] [associations]
symbol:ARF11 "auxin response factor 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC006526 EMBL:AC006418
HOGENOM:HOG000241141 EMBL:AY669791 EMBL:AK229757 EMBL:BX837073
EMBL:AK229924 IPI:IPI00544804 IPI:IPI00547357 IPI:IPI00656718
PIR:A84904 RefSeq:NP_001031548.1 RefSeq:NP_182176.2
RefSeq:NP_973701.1 UniGene:At.36497 ProteinModelPortal:Q9ZPY6
SMR:Q9ZPY6 PRIDE:Q9ZPY6 EnsemblPlants:AT2G46530.3 GeneID:819264
KEGG:ath:AT2G46530 GeneFarm:3388 TAIR:At2g46530 eggNOG:NOG303653
InParanoid:Q9ZPY6 OMA:MFEIEGE PhylomeDB:Q9ZPY6
ProtClustDB:CLSN2681223 ArrayExpress:Q9ZPY6 Genevestigator:Q9ZPY6
Uniprot:Q9ZPY6
Length = 622
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 39/124 (31%), Positives = 57/124 (45%)
Query: 207 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSGSTSKGLLLNFEDVTGKVWRFRYSYWNS 265
F K +T SD + ++HA + P L + L D+ G WRF++ +
Sbjct: 145 FVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQ 204
Query: 266 SQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKART-GPIENPVEPVQMMR 324
+ ++LT GWS FV K L AGD F R GD ++ + A+ + V Q MR
Sbjct: 205 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMR 264
Query: 325 LFGV 328
L GV
Sbjct: 265 L-GV 267
>TAIR|locus:2119555 [details] [associations]
symbol:AT4G13620 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL035528 EMBL:AL161537
EMBL:AY560871 EMBL:BT029729 IPI:IPI00527648 PIR:G85147 PIR:T05231
RefSeq:NP_193098.1 UniGene:At.33355 ProteinModelPortal:Q9SVQ0
SMR:Q9SVQ0 MINT:MINT-7263031 PaxDb:Q9SVQ0 EnsemblPlants:AT4G13620.1
GeneID:826996 KEGG:ath:AT4G13620 TAIR:At4g13620 eggNOG:NOG330371
HOGENOM:HOG000112389 InParanoid:Q9SVQ0 OMA:NEWVEIN PhylomeDB:Q9SVQ0
ProtClustDB:CLSN2713732 Genevestigator:Q9SVQ0 Uniprot:Q9SVQ0
Length = 388
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 28/63 (44%), Positives = 35/63 (55%)
Query: 67 PSSKYKGVVPQPNGRWGAQIY--EKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
P+ Y+GV + G+W A+I RVWLGTF E+AA AYD AA RG A NF
Sbjct: 228 PTKLYRGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHLNF 287
Query: 125 KQI 127
+
Sbjct: 288 PDL 290
>TAIR|locus:2204237 [details] [associations]
symbol:ARF6 "auxin response factor 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0009908 "flower development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009886 "post-embryonic morphogenesis" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010051 "xylem and phloem
pattern formation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC025295
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 HOGENOM:HOG000241141 EMBL:AF013467 EMBL:AY669788
EMBL:EU550049 EMBL:EU550050 EMBL:EU550051 EMBL:EU550052
EMBL:EU550053 EMBL:EU550054 EMBL:EU550055 EMBL:EU550056
EMBL:EU550057 EMBL:EU550058 EMBL:EU550059 EMBL:EU550060
EMBL:EU550061 EMBL:EU550062 EMBL:EU550063 EMBL:EU550064
EMBL:EU550065 EMBL:EU550066 EMBL:EU550067 EMBL:EU550068
EMBL:EU550069 EMBL:EU550070 EMBL:EU550071 EMBL:EU550072
IPI:IPI00533211 IPI:IPI00656643 PIR:F86427 RefSeq:NP_001031115.1
RefSeq:NP_174323.1 UniGene:At.21939 ProteinModelPortal:Q9ZTX8
SMR:Q9ZTX8 IntAct:Q9ZTX8 STRING:Q9ZTX8 PaxDb:Q9ZTX8 PRIDE:Q9ZTX8
EnsemblPlants:AT1G30330.2 GeneID:839913 KEGG:ath:AT1G30330
GeneFarm:3369 TAIR:At1g30330 eggNOG:NOG288258 InParanoid:Q9ZTX8
OMA:ANSHWRS PhylomeDB:Q9ZTX8 ProtClustDB:CLSN2686713
Genevestigator:Q9ZTX8 GermOnline:AT1G30330 Uniprot:Q9ZTX8
Length = 935
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 31/87 (35%), Positives = 42/87 (48%)
Query: 207 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSGSTSKGLLLNFEDVTGKVWRFRYSYWNS 265
F K +T SD +P++ AEK FP L L D+ W+FR+ +
Sbjct: 129 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQ 188
Query: 266 SQSYVLTKGWSRFVKEKNLKAGDIVSF 292
+ ++LT GWS FV K L AGD V F
Sbjct: 189 PKRHLLTTGWSVFVSAKRLVAGDSVLF 215
>TAIR|locus:2195052 [details] [associations]
symbol:DDF1 "DWARF AND DELAYED FLOWERING 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010371 "regulation of gibberellin biosynthetic
process" evidence=IMP] [GO:0016049 "cell growth" evidence=IMP]
[GO:0048510 "regulation of timing of transition from vegetative to
reproductive phase" evidence=IMP] [GO:0009651 "response to salt
stress" evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IPI] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0050826 "response to freezing" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0016049 GO:GO:0009651 GO:GO:0009414 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0009408 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0050826 GO:GO:0048510 GO:GO:0010371
HOGENOM:HOG000237624 ProtClustDB:CLSN2682371 EMBL:AY560892
EMBL:AC025417 EMBL:AK228194 IPI:IPI00542906 PIR:H86259
RefSeq:NP_172721.1 UniGene:At.42068 ProteinModelPortal:Q9LN86
SMR:Q9LN86 EnsemblPlants:AT1G12610.1 GeneID:837817
KEGG:ath:AT1G12610 GeneFarm:3608 TAIR:At1g12610 eggNOG:NOG323951
InParanoid:Q9LN86 OMA:EVREPTH PhylomeDB:Q9LN86
Genevestigator:Q9LN86 GermOnline:AT1G12610 Uniprot:Q9LN86
Length = 209
Score = 115 (45.5 bits), Expect = 0.00016, P = 0.00016
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 71 YKGVVPQPNGRWGAQIYEK-HQR-VWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
Y+G+ + +W ++ E HQR +WLGT+ + AARA+D+A RGR A NF
Sbjct: 30 YRGIRRRNGDKWVCEVREPTHQRRIWLGTYPTADMAARAHDVAVLALRGRSACLNF 85
>TAIR|locus:2146248 [details] [associations]
symbol:AT5G18450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
EMBL:AC051626 EMBL:AY560853 EMBL:BT026074 IPI:IPI00546020
RefSeq:NP_197346.1 UniGene:At.64239 ProteinModelPortal:P61827
SMR:P61827 EnsemblPlants:AT5G18450.1 GeneID:831963
KEGG:ath:AT5G18450 GeneFarm:3680 TAIR:At5g18450 eggNOG:NOG239971
HOGENOM:HOG000112272 OMA:PENATCT ProtClustDB:CLSN2916324
Genevestigator:P61827 GermOnline:AT5G18450 Uniprot:P61827
Length = 307
Score = 117 (46.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 71 YKGVVPQPNGRWGAQIYEKHQ--RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTN 123
++GV + G+W A+I E ++ R+WLGTFN EAA AYD AA++ G +A N
Sbjct: 34 FRGVRQRTWGKWVAEIREPNRGTRLWLGTFNTSVEAAMAYDEAAKKLYGHEAKLN 88
Score = 40 (19.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 20/62 (32%), Positives = 27/62 (43%)
Query: 266 SQSYVLTKG-WSRFVKEKNLKAGDIVSFH------------RSTGGDRQLYIDWKARTGP 312
SQ+Y L G WSRF+ + K VS S GG+R + + RTG
Sbjct: 211 SQNYGLYNGAWSRFLVGQEKKTEHDVSSSCGSSDNKESMLVPSCGGERMHRPELEERTGY 270
Query: 313 IE 314
+E
Sbjct: 271 LE 272
>TAIR|locus:2182993 [details] [associations]
symbol:PUCHI species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009908 "flower development" evidence=IMP]
[GO:0010102 "lateral root morphogenesis" evidence=IMP] [GO:0010432
"bract development" evidence=IGI;IMP] [GO:0010451 "floral meristem
growth" evidence=IMP] [GO:0010582 "floral meristem determinacy"
evidence=IGI;IMP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 GO:GO:0010582 EMBL:AC069328
EMBL:AY560873 IPI:IPI00532675 RefSeq:NP_197357.2 UniGene:At.49752
ProteinModelPortal:Q6J9Q2 SMR:Q6J9Q2 STRING:Q6J9Q2
EnsemblPlants:AT5G18560.1 GeneID:831974 KEGG:ath:AT5G18560
GeneFarm:2221 TAIR:At5g18560 eggNOG:NOG237521 HOGENOM:HOG000176627
InParanoid:Q6J9Q2 OMA:SAMITNY Genevestigator:Q6J9Q2 GO:GO:0010432
GO:GO:0010451 GO:GO:0010102 Uniprot:Q6J9Q2
Length = 348
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 63 SRKLPSSKYKGVVPQPNGRWGAQIYEK--HQRVWLGTFNEEEEAARAYDIAAQRFRGRDA 120
S++ ++ GV +P GR+ A+I + +R WLGTF+ EAA AYD AA RG A
Sbjct: 47 SKQAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQA 106
Query: 121 VTNF 124
TNF
Sbjct: 107 RTNF 110
>TAIR|locus:2125497 [details] [associations]
symbol:AT4G03170 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003340 Pfam:PF02362
PROSITE:PS50863 SMART:SM01019 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AL161496 EMBL:AC005275 eggNOG:NOG309577 HOGENOM:HOG000154970
ProtClustDB:CLSN2679416 EMBL:AB493674 IPI:IPI00517107 PIR:C85040
RefSeq:NP_192226.1 UniGene:At.54109 ProteinModelPortal:Q9ZR14
EnsemblPlants:AT4G03170.1 GeneID:828050 KEGG:ath:AT4G03170
TAIR:At4g03170 InParanoid:Q9ZR14 OMA:FRHIKTR PhylomeDB:Q9ZR14
Genevestigator:Q9ZR14 Uniprot:Q9ZR14
Length = 250
Score = 111 (44.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 29/95 (30%), Positives = 48/95 (50%)
Query: 194 FGSDRVLKARDQLFEKAVTPSDVGKLN-RLVIPKQHA-EKHFPLQSGSTS--KGLLLNFE 249
FG + V + + +K + SDV K L++ K+ EK P S + KG+ ++
Sbjct: 123 FGDNEVTRLFSRPIKKQLMSSDVDKDQCMLMLSKEQVKEKMLPFLEDSENPVKGIDVSVY 182
Query: 250 DVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL 284
GKV + + WN ++ VLT GW +FV++ L
Sbjct: 183 GPDGKVQQMEFKMWNGDKTPVLTSGWKQFVEDYGL 217
Score = 42 (19.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 22/76 (28%), Positives = 31/76 (40%)
Query: 100 EEEEAARAYDIAAQRFRGRDAVTNFKQISCAGTSSD----DGDIEMAFLSSHSKSEIVD- 154
E+EEA A +I AQ + D + + I D D D E+A L +S+
Sbjct: 14 EDEEATSATEILAQLMQ--DIIDREEDIDDEDDIDDEVIDDEDYEVASLPLLQESQANQK 71
Query: 155 MLRKHTYNDELEQSKR 170
R+ E Q KR
Sbjct: 72 QSREREEETEKNQPKR 87
>TAIR|locus:504956445 [details] [associations]
symbol:AT5G21960 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC140977 EMBL:AL589883
HOGENOM:HOG000237624 EMBL:AY560866 EMBL:BT011577 EMBL:BT012243
IPI:IPI00534105 RefSeq:NP_680184.1 UniGene:At.45636
ProteinModelPortal:Q9C591 SMR:Q9C591 EnsemblPlants:AT5G21960.1
GeneID:832256 KEGG:ath:AT5G21960 TAIR:At5g21960 eggNOG:NOG289112
InParanoid:Q9C591 OMA:RFACEEE PhylomeDB:Q9C591
ProtClustDB:CLSN2917830 Genevestigator:Q9C591 Uniprot:Q9C591
Length = 216
Score = 114 (45.2 bits), Expect = 0.00023, P = 0.00023
Identities = 26/59 (44%), Positives = 34/59 (57%)
Query: 68 SSKYKGVVPQPNGRWGAQIY--EKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF 124
S KY GV + G+W A+I R+WLG+F+ E+AARA+D A RG A NF
Sbjct: 4 SPKYTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNF 62
>TAIR|locus:2051359 [details] [associations]
symbol:ERF53 "ERF domain 53" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009651
"response to salt stress" evidence=IEP] [GO:2000070 "regulation of
response to water deprivation" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0009651
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC006234 EMBL:AY062843 EMBL:AY081659
IPI:IPI00525064 PIR:E84594 RefSeq:NP_179685.1 UniGene:At.27216
ProteinModelPortal:Q9SKT1 SMR:Q9SKT1 STRING:Q9SKT1
EnsemblPlants:AT2G20880.1 GeneID:816622 KEGG:ath:AT2G20880
TAIR:At2g20880 eggNOG:NOG272542 HOGENOM:HOG000112388
InParanoid:Q9SKT1 OMA:SEETGWA PhylomeDB:Q9SKT1
ProtClustDB:CLSN2683557 Genevestigator:Q9SKT1 GO:GO:2000070
Uniprot:Q9SKT1
Length = 336
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 71 YKGVVPQPNGRWGAQIYEKHQR--VWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQI 127
Y+GV + G+W A+I + R +WLGTF+ EEAA AYD A + RG A NF ++
Sbjct: 187 YRGVRQRHWGKWVAEIRKPRNRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLNFPEL 245
>TAIR|locus:2126619 [details] [associations]
symbol:AT4G31060 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AL022198 EMBL:AL161578 EMBL:AY560884 EMBL:BT011774
EMBL:BT012399 IPI:IPI00530702 PIR:G85363 RefSeq:NP_567867.1
UniGene:At.31779 UniGene:At.74201 ProteinModelPortal:Q6NLD5
SMR:Q6NLD5 EnsemblPlants:AT4G31060.1 GeneID:829233
KEGG:ath:AT4G31060 TAIR:At4g31060 eggNOG:NOG279537
HOGENOM:HOG000097077 InParanoid:Q6NLD5 OMA:MDIDWIN PhylomeDB:Q6NLD5
ProtClustDB:CLSN2689698 Genevestigator:Q6NLD5 Uniprot:Q6NLD5
Length = 187
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 30/78 (38%), Positives = 42/78 (53%)
Query: 49 SSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIY--EKHQRVWLGTFNEEEEAAR 106
S I S G E RK Y+GV + G+W ++I + +R+WLG+++ E+AAR
Sbjct: 8 SPFISSSLKGAH-EDRKFKC--YRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAAR 64
Query: 107 AYDIAAQRFRGRDAVTNF 124
AYD A RG V NF
Sbjct: 65 AYDAALFCIRGEKGVYNF 82
>TAIR|locus:2153504 [details] [associations]
symbol:DREB2A "AT5G05410" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IMP;TAS] [GO:0010224 "response to UV-B" evidence=IEP;IGI]
[GO:0010286 "heat acclimation" evidence=IEP;RCA] [GO:0009408
"response to heat" evidence=IMP] [GO:0042542 "response to hydrogen
peroxide" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006457 "protein folding" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0042542 GO:GO:0010224
EMBL:AB010692 GO:GO:0010286 EMBL:AB007790 EMBL:AB016570
EMBL:AY063972 EMBL:AY691903 IPI:IPI00537633 PIR:T51833
RefSeq:NP_196160.1 UniGene:At.25247 ProteinModelPortal:O82132
SMR:O82132 IntAct:O82132 STRING:O82132 EnsemblPlants:AT5G05410.1
GeneID:830424 KEGG:ath:AT5G05410 GeneFarm:3658 TAIR:At5g05410
eggNOG:NOG283761 HOGENOM:HOG000015215 InParanoid:O82132 OMA:EVCTVET
PhylomeDB:O82132 ProtClustDB:CLSN2684051 Genevestigator:O82132
GermOnline:AT5G05410 Uniprot:O82132
Length = 335
Score = 116 (45.9 bits), Expect = 0.00040, P = 0.00040
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 71 YKGVVPQPNGRWGAQIYEKHQ--RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQIS 128
++GV + G+W A+I E ++ R+WLGTF +EAA AYD AA+ G A NF +
Sbjct: 79 FRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMYGPLARLNFPRSD 138
Query: 129 CAGTSSDDGDIEMAFLSS----HSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKH 184
+ +S E+ + + H K+E D K ++ +E Y L+ NG +K
Sbjct: 139 ASEVTSTSSQSEVCTVETPGCVHVKTEDPDCESK-PFSGGVEPM---YCLE-NGAEEMKR 193
Query: 185 G 185
G
Sbjct: 194 G 194
>TAIR|locus:2201282 [details] [associations]
symbol:CRF10 "cytokinin response factor 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC011915 HOGENOM:HOG000090785
EMBL:AY059782 EMBL:AY091303 IPI:IPI00525788 PIR:G96709
RefSeq:NP_177022.1 RefSeq:NP_974106.1 UniGene:At.21149
ProteinModelPortal:Q9CA27 SMR:Q9CA27 EnsemblPlants:AT1G68550.1
EnsemblPlants:AT1G68550.2 GeneID:843184 KEGG:ath:AT1G68550
TAIR:At1g68550 eggNOG:NOG260441 InParanoid:Q9CA27 OMA:IVREINF
PhylomeDB:Q9CA27 ProtClustDB:CLSN2682301 Genevestigator:Q9CA27
Uniprot:Q9CA27
Length = 324
Score = 115 (45.5 bits), Expect = 0.00049, P = 0.00049
Identities = 34/92 (36%), Positives = 45/92 (48%)
Query: 26 ITFPASIPPTKSPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQ 85
I FP S+ ++ P S S D + V A S +P K GV + G+W A+
Sbjct: 74 INFP-SMEVSEQPSE----SSSQDSTKTDGKIAVSA-SPAVPRKKPVGVRQRKWGKWAAE 127
Query: 86 IYE--KHQRVWLGTFNEEEEAARAYDIAAQRF 115
I + K R WLGTF+ EEAA+AYD F
Sbjct: 128 IRDPIKKTRTWLGTFDTLEEAAKAYDAKKLEF 159
>UNIPROTKB|Q5W6R4 [details] [associations]
symbol:DREB2B "Dehydration-responsive element-binding
protein 2B" species:39947 "Oryza sativa Japonica Group" [GO:0003677
"DNA binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0009414 "response
to water deprivation" evidence=IMP] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0009651 GO:GO:0009414 GO:GO:0003700 GO:GO:0006351
GO:GO:0009408 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AP008211
EMBL:CM000142 eggNOG:NOG283761 EMBL:AC134927 EMBL:AC134928
EMBL:AK071850 EMBL:AK099221 RefSeq:NP_001055260.2 UniGene:Os.7718
STRING:Q5W6R4 EnsemblPlants:LOC_Os05g27930.2
EnsemblPlants:LOC_Os05g27930.3 EnsemblPlants:LOC_Os05g27930.4
GeneID:4338484 KEGG:dosa:Os05t0346200-01 KEGG:osa:4338484
Gramene:Q5W6R4 HOGENOM:HOG000242982 Uniprot:Q5W6R4
Length = 373
Score = 115 (45.5 bits), Expect = 0.00064, P = 0.00064
Identities = 28/58 (48%), Positives = 36/58 (62%)
Query: 71 YKGVVPQPNGRWGAQIYEKHQ--RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQ 126
++GV + G+W A+I E +Q R+WLGTF E AA AYD AA+ G A TNF Q
Sbjct: 89 FRGVRQRTWGKWVAEIREPNQQSRLWLGTFPTAEAAACAYDEAARAMYGPMARTNFGQ 146
>TAIR|locus:2063073 [details] [associations]
symbol:DREB2C species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010286 "heat acclimation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009737 "response
to abscisic acid stimulus" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0009737 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009738 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AF085279 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010286 HOGENOM:HOG000015215 EMBL:AC007020 EMBL:BT026505
EMBL:AY084695 IPI:IPI00546839 PIR:C84828 RefSeq:NP_565929.1
UniGene:At.37068 ProteinModelPortal:Q8LFR2 SMR:Q8LFR2 IntAct:Q8LFR2
STRING:Q8LFR2 EnsemblPlants:AT2G40340.1 GeneID:818627
KEGG:ath:AT2G40340 GeneFarm:3661 TAIR:At2g40340 eggNOG:NOG322546
InParanoid:Q8LFR2 OMA:DESEVCA PhylomeDB:Q8LFR2
ProtClustDB:CLSN2917292 Genevestigator:Q8LFR2 GermOnline:AT2G40340
Uniprot:Q8LFR2
Length = 341
Score = 114 (45.2 bits), Expect = 0.00070, P = 0.00070
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 71 YKGVVPQPNGRWGAQIYEKH--QRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQIS 128
Y+GV + G+W A+I E R+WLGTF+ EAA AYD AA+ G+ A N +I+
Sbjct: 72 YRGVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAALAYDEAAKAIYGQSARLNLPEIT 131
Query: 129 CAGTSS 134
+S+
Sbjct: 132 NRSSST 137
>TAIR|locus:2037169 [details] [associations]
symbol:ARF23 "auxin response factor 23" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
HOGENOM:HOG000241141 EMBL:AC022314 IPI:IPI00526589 PIR:E96503
RefSeq:NP_175062.1 UniGene:At.52022 ProteinModelPortal:Q9LP07
SMR:Q9LP07 EnsemblPlants:AT1G43950.1 GeneID:840994
KEGG:ath:AT1G43950 GeneFarm:3427 TAIR:At1g43950 OMA:PTENENQ
PhylomeDB:Q9LP07 Genevestigator:Q9LP07 GermOnline:AT1G43950
Uniprot:Q9LP07
Length = 222
Score = 110 (43.8 bits), Expect = 0.00074, P = 0.00074
Identities = 30/99 (30%), Positives = 43/99 (43%)
Query: 207 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSGSTSKGLLLNFEDVTGKVWRFRYSYWNS 265
F K +T SD +P +HA + P L L D+ G WRF++SY
Sbjct: 126 FTKVLTASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYRVP 185
Query: 266 SQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYI 304
T GW+ F K L GD++ F R G+ ++ I
Sbjct: 186 RGD---TTGWNAFTTSKKLVVGDVIVFARGETGELRVGI 221
>UNIPROTKB|Q84ZA1 [details] [associations]
symbol:DREB2C "Dehydration-responsive element-binding
protein 2C" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0006950 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
EMBL:AP008214 EMBL:AY339375 EMBL:AP004623 EMBL:AP005411
EMBL:AK108143 RefSeq:NP_001062535.1 UniGene:Os.30907
ProteinModelPortal:Q84ZA1 GeneID:4346351 KEGG:dosa:Os08t0565200-01
KEGG:osa:4346351 Gramene:Q84ZA1 eggNOG:NOG242446 Uniprot:Q84ZA1
Length = 230
Score = 110 (43.8 bits), Expect = 0.00082, P = 0.00082
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 62 ESRKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFNEEEEAARAYDIAAQRFRGRD 119
E+++ P ++GV + G+W A+I E ++ R+WLGTFN +AARAYD AA+ G
Sbjct: 49 ENQRCP---FRGVRQRTWGKWVAEIREPNRGARLWLGTFNTALDAARAYDSAARALYGDC 105
Query: 120 AVTN 123
A N
Sbjct: 106 ARLN 109
>TAIR|locus:2028426 [details] [associations]
symbol:CRF9 "cytokinin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC016041 EMBL:AY560840
IPI:IPI00516406 RefSeq:NP_175338.1 UniGene:At.50653
ProteinModelPortal:Q9M9B2 SMR:Q9M9B2 PRIDE:Q9M9B2
EnsemblPlants:AT1G49120.1 GeneID:841335 KEGG:ath:AT1G49120
TAIR:At1g49120 eggNOG:NOG329564 HOGENOM:HOG000112332
InParanoid:Q9M9B2 OMA:LEDPLMT PhylomeDB:Q9M9B2
ProtClustDB:CLSN2914218 Genevestigator:Q9M9B2 Uniprot:Q9M9B2
Length = 329
Score = 113 (44.8 bits), Expect = 0.00085, P = 0.00085
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 53 LDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQI---YEKHQRVWLGTFNEEEEAARAYD 109
+ + G +A + SS +KGV +P G++ A+I +EK +R WLGTF EEEAA AY
Sbjct: 69 VSNSTGNKAAGNRKTSSGFKGVRRRPWGKFAAEIRNPFEK-KRKWLGTFPTEEEAAEAYQ 127
Query: 110 IAAQRFRGR 118
+ + F R
Sbjct: 128 KSKREFDER 136
>TAIR|locus:2060385 [details] [associations]
symbol:AT2G22200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC007168 HOGENOM:HOG000239817
EMBL:AY090378 EMBL:AY143836 IPI:IPI00527119 PIR:B84610
RefSeq:NP_179810.1 UniGene:At.39467 ProteinModelPortal:Q9SIE4
SMR:Q9SIE4 EnsemblPlants:AT2G22200.1 GeneID:816754
KEGG:ath:AT2G22200 TAIR:At2g22200 eggNOG:euNOG21323
InParanoid:Q9SIE4 OMA:EFEEIGS PhylomeDB:Q9SIE4
ProtClustDB:CLSN2683732 Genevestigator:Q9SIE4 Uniprot:Q9SIE4
Length = 261
Score = 111 (44.1 bits), Expect = 0.00088, P = 0.00088
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 71 YKGVVPQPNGRWGAQIY--EKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQI 127
Y+GV + G+W A+I + R+WLGTF E+AA AYD AA + RG A NF +
Sbjct: 71 YRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEKAALAYDQAAFQLRGDIAKLNFPNL 129
>UNIPROTKB|C7J2Z1 [details] [associations]
symbol:ABI4 "Ethylene-responsive transcription factor ABI4"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0006950 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
eggNOG:NOG282672 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
EMBL:AC136221 EMBL:AP008211 RefSeq:NP_001174376.1 UniGene:Os.101814
GeneID:9271873 KEGG:dosa:Os05t0351200-00 KEGG:osa:9271873
Gramene:C7J2Z1 HOGENOM:HOG000241371 OMA:PRAHLNL Uniprot:C7J2Z1
Length = 269
Score = 111 (44.1 bits), Expect = 0.00094, P = 0.00094
Identities = 27/56 (48%), Positives = 33/56 (58%)
Query: 70 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTN 123
+Y+GV + G+W A+I E K R WLGTF E+AARAYD AA G A N
Sbjct: 49 RYRGVRQRSWGKWVAEIREPRKRSRKWLGTFATAEDAARAYDRAALLLYGPRAHLN 104
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 378 360 0.00082 117 3 11 22 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 176
No. of states in DFA: 610 (65 KB)
Total size of DFA: 245 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.85u 0.20s 31.05t Elapsed: 00:00:01
Total cpu time: 30.87u 0.21s 31.08t Elapsed: 00:00:01
Start: Fri May 10 08:38:14 2013 End: Fri May 10 08:38:15 2013
WARNINGS ISSUED: 1