BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017043
(378 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54CV5|BUB1_DICDI Probable inactive serine/threonine-protein kinase bub1
OS=Dictyostelium discoideum GN=bub1 PE=3 SV=1
Length = 1306
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 158/341 (46%), Gaps = 51/341 (14%)
Query: 16 NEWELFKENVRPLKRGRNIRLLNDALASHNSFHLKKSLLDNRRRLIEAIDKYEGDDPLQP 75
++WE KEN+ PLK GR+ L AL + + + L +++ I++Y+G+DP+
Sbjct: 5 SDWENTKENIVPLKTGRDPTKL--ALFAKQTNQSDEELEKEKQKFEIIINEYQGEDPIDN 62
Query: 76 WLECIKWVQEAFPAGGDSSGLVVIYEQCVRRFWHSQCYKDDLRYLNVWLEYAENCIDAQV 135
WL+ IKWVQ+++P G L+V+ E+C R F ++ YK+D RYL +W+ YA+ C D
Sbjct: 63 WLKYIKWVQQSYPGGNMKEQLIVLLERCTRLFLSTEKYKNDPRYLRIWITYADMCRDPIE 122
Query: 136 IFSFLDANDIGKTHSVYYIAYALHMESKSKMKAANDLFSLGISRNAQPTEKLKDAYKKFL 195
+FSFL+ IG S+ Y A A+ E+K + A+ F GI R AQP E+L+ + F
Sbjct: 123 VFSFLEVQRIGFYLSLLYEARAIVYENKGNYEQADKSFKQGIERKAQPIERLQQKHLDFE 182
Query: 196 VRSMRKTQ---------------------VIDEDSKENHLPVRSFGTVLARE-ENRRQAM 233
R + + + +++ L + GT+ + + R++
Sbjct: 183 RRLIARLKHQQQHQQLQQQQQQQNDQLEQQQLDENGNTKLTRSALGTISSSSVHSERKSQ 242
Query: 234 QSSDM--------QRKKLKPDGNHRAPFSVYKDTNVDITSCHQPDNSK------------ 273
Q+ + +++K+ D + F ++ D T+ +SK
Sbjct: 243 QTKGLPLGNSTIDKKRKVGNDQKNNLGFQIFDDEKGGSTTNEVLTDSKFFGSSRKAAALM 302
Query: 274 -------TECNSWLTLGAQAERNKENNAKPAKWTSCKIPQR 307
T W L + ++KEN KW+ K+ Q+
Sbjct: 303 AAGQTQQTSQMKWDELEPELNKHKENTQLSQKWSDVKLLQK 343
>sp|Q9Z1S0|BUB1B_MOUSE Mitotic checkpoint serine/threonine-protein kinase BUB1 beta OS=Mus
musculus GN=Bub1b PE=1 SV=2
Length = 1052
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 150/302 (49%), Gaps = 20/302 (6%)
Query: 15 GNEWELFKENVRPLKRGRNIRLLNDALASHNSFHLKKSLLDNRRRLIEA-IDKYEGDDPL 73
G EWEL KEN++PL+ GR + L ALA S + L ++R E+ I Y GDDPL
Sbjct: 12 GAEWELSKENIQPLRHGRVMSTLQGALAKQES--AGHTALQQQKRAFESEIRFYSGDDPL 69
Query: 74 QPWLECIKWVQEAFPAGGDSSGLVVIYEQCVRRFWHSQCYKDDLRYLNVWLEYAENCIDA 133
W I W ++ +P GG S + + E+ + Y +D R+L++W++ C +
Sbjct: 70 DVWDRYINWTEQNYPQGGKESNMSALVERAIEALQGETRYYNDPRFLSLWIKLGHLCNEP 129
Query: 134 QVIFSFLDANDIGKTHSVYYIAYALHMESKSKMKAANDLFSLGISRNAQPTEKLKDAYKK 193
++S+L + IG + + +YI++A E++ K A+ +F GI R A+P ++L+ +++
Sbjct: 130 LDMYSYLQSQGIGVSLAQFYISWAEEYEARENFKKADIIFQEGIERKAEPLDRLQSQHRQ 189
Query: 194 FLVRSMRKTQVI----DEDSKENHLPVRSFGTVLAREENRRQAMQSSDMQR--KKLKPDG 247
F R R+ + +E++ E P RS LA ++R + M + + R LK G
Sbjct: 190 FQSRVSRQAFLALGNEEEEALEPSEPQRS---SLAELKSRGKKMARAPISRVGGALKAPG 246
Query: 248 NHRA-----PFSVYKDTNVDITSCHQPDNSKTECNSWLT---LGAQAERNKENNAKPAKW 299
R P V+ + + + + S+TE + + + R KEN +P W
Sbjct: 247 QSRGFLNAVPQPVHGNRRITVFDENADTASRTELSKPVAQPWMAPPVPRAKENELQPGPW 306
Query: 300 TS 301
++
Sbjct: 307 ST 308
>sp|O60566|BUB1B_HUMAN Mitotic checkpoint serine/threonine-protein kinase BUB1 beta
OS=Homo sapiens GN=BUB1B PE=1 SV=3
Length = 1050
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 105/188 (55%), Gaps = 2/188 (1%)
Query: 15 GNEWELFKENVRPLKRGRNIRLLNDALASHNSFHLKKSLLDNRRRLIEAIDKYEGDDPLQ 74
G+EWEL KENV+PL++GR + L ALA ++ + +L +R I Y G+DPL
Sbjct: 19 GDEWELSKENVQPLRQGRIMSTLQGALAQESACN--NTLQQQKRAFEYEIRFYTGNDPLD 76
Query: 75 PWLECIKWVQEAFPAGGDSSGLVVIYEQCVRRFWHSQCYKDDLRYLNVWLEYAENCIDAQ 134
W I W ++ +P GG S + + E+ V + Y D R+LN+WL+ C +
Sbjct: 77 VWDRYISWTEQNYPQGGKESNMSTLLERAVEALQGEKRYYSDPRFLNLWLKLGRLCNEPL 136
Query: 135 VIFSFLDANDIGKTHSVYYIAYALHMESKSKMKAANDLFSLGISRNAQPTEKLKDAYKKF 194
++S+L IG + + +YI++A E++ + A+ +F GI + A+P E+L+ +++F
Sbjct: 137 DMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPLERLQSQHRQF 196
Query: 195 LVRSMRKT 202
R R+T
Sbjct: 197 QARVSRQT 204
>sp|O59767|MAD3_SCHPO Mitotic spindle checkpoint component mad3 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mad3 PE=1 SV=2
Length = 310
Score = 122 bits (305), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 134/287 (46%), Gaps = 23/287 (8%)
Query: 22 KENVRPLKRGRNIRLLNDALASHNSFHLKKSLLDNRRRLIEAIDKYEG-DDPLQPWLECI 80
KEN+ P K G + L + + +++ L R I+ E DDPLQ W++ I
Sbjct: 20 KENIEPRKAGHSASALAKSSSRNHTEKEVAGLQKERMGHERKIETSESLDDPLQVWIDYI 79
Query: 81 KWVQEAFPAG-GDSSGLVVIYEQCVRRFWHSQCYKDDLRYLNVWLEYAENCIDAQV-IFS 138
KW + FP G +SGLV + E+C R F + YKDD+RYL +W++Y N ID V +FS
Sbjct: 80 KWTLDNFPQGETKTSGLVTLLERCTREFVRNPLYKDDVRYLRIWMQYV-NYIDEPVELFS 138
Query: 139 FLDANDIGKTHSVYYIAYALHMESKSKMKAANDLFSLGISRNAQPTEKLKDAYKKFLVRS 198
FL + IG+ S++Y YA + ES+ + A++++ G A+P + + Y++F R
Sbjct: 139 FLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAKPFLRFQQKYQQFTHRW 198
Query: 199 MRKTQVIDEDSKENHLPVRSFGTVLAREENRRQAMQSSDMQRKKLKPDGNHRAPFSVYKD 258
+ + + N V T + + + + + K K FSVY D
Sbjct: 199 L---EFAPQSFSSNTNSVNPLQTTFESTNIQEISQSRTKISKPKFK--------FSVYSD 247
Query: 259 TNVDITSCHQPDNSKTECNSWLTLGAQAERNKENNAKPAKWTSCKIP 305
+ + +W TLG +R KENN W K+P
Sbjct: 248 AD--------GSGKDGQPGTWQTLGTVDQRRKENNISATSWVGEKLP 286
>sp|P47074|MAD3_YEAST Spindle assembly checkpoint component MAD3 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAD3 PE=1
SV=1
Length = 515
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 34/295 (11%)
Query: 17 EWELFKENVRPLKRGRNIRLLNDALASHNSF----HLKKSLLDNRRRLIEAIDKYEGDDP 72
E E KEN+ PLK GR+ L+ A+ H +K S +RLI+ + DP
Sbjct: 25 EIETQKENILPLKEGRSAAALSKAI--HQPLVEINQVKSSF---EQRLIDELPAL--SDP 77
Query: 73 LQPWLECIKWVQEAFPAGGDS--SGLVVIYEQCVRRFWHSQCYKDDLRYLNVWLEYAE-- 128
+ +LE IKW+ A+P GG+S SG++ + E+C+ + Y++D+R+L +W Y E
Sbjct: 78 ITLYLEYIKWLNNAYPQGGNSKQSGMLTLLERCLSHLKDLERYRNDVRFLKIWFWYIELF 137
Query: 129 ---NCIDAQVIFSFLDANDIGKTHSVYYIAYALHMESKSKMKAANDLFSLGISRNAQPTE 185
+ ++++ IF ++ N IG + +Y + + K K + A + LGI A+P +
Sbjct: 138 TRNSFMESRDIFMYMLRNGIGSELASFYEEFTNLLIQKEKFQYAVKILQLGIKNKARPNK 197
Query: 186 KLKDAYKKFLVRSMRKTQV-----IDEDSKENHLPVRSFGTVLAREENRRQAMQSSDMQR 240
L+D L+R + + + I DS E+ + ++ + R E Q SSD+
Sbjct: 198 VLEDRLNH-LLRELGENNIQLGNEISMDSLESTVLGKTRSEFVNRLELANQNGTSSDVNL 256
Query: 241 KKLKPDGNHRAPFSVYKDTNVDITSCHQPDNSKTECNSWLTLGAQAERNKENNAK 295
K +V+ D + N + W +AERNKENN +
Sbjct: 257 TK----------NNVFVDGEESDVELFETPNRGVYRDGWENFDLKAERNKENNLR 301
>sp|O08901|BUB1_MOUSE Mitotic checkpoint serine/threonine-protein kinase BUB1 OS=Mus
musculus GN=Bub1 PE=2 SV=1
Length = 1058
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Query: 54 LDNRRRLIEA-IDKYEGDDPLQPWLECIKWVQEAFPAGGDSSGLVVIYEQCVRRFWHSQC 112
L+N R+ EA + Y G+DPL W IKWV+E FP + L+ + E ++ F H +
Sbjct: 4 LENVFRMFEAHMQSYTGNDPLGEWESFIKWVEENFP--DNKEYLMTLLEHLMKEFLHKKN 61
Query: 113 YKDDLRYLNVWLEYAENCIDAQVIFSFLDANDIGKTHSVYYIAYALHMESKSKMKAANDL 172
Y +D R++N L++AE D F FL IG S Y+++A H+E++ +++ A+ +
Sbjct: 62 YHNDSRFINYCLKFAEYNSDRHQFFEFLYNQGIGTKSSYIYMSWAGHLEAQGELQHASAI 121
Query: 173 FSLGISRNAQPTEKLKDAYKKFLVR 197
F GI A+P E L+ Y+ F R
Sbjct: 122 FQTGIHNEAEPKELLQQQYRLFQAR 146
>sp|O43683|BUB1_HUMAN Mitotic checkpoint serine/threonine-protein kinase BUB1 OS=Homo
sapiens GN=BUB1 PE=1 SV=1
Length = 1085
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 14/165 (8%)
Query: 55 DNRRRLIEA-IDKYEGDDPLQPWLECIKWVQEAFPAGGDSSGLVVIYEQCVRRFWHSQCY 113
+N +++EA + Y+G+DPL W I+WV+E FP + L+ + E ++ F + Y
Sbjct: 5 ENVLQMLEAHMQSYKGNDPLGEWERYIQWVEENFPENKEY--LITLLEHLMKEFLDKKKY 62
Query: 114 KDDLRYLNVWLEYAENCIDAQVIFSFLDANDIGKTHSVYYIAYALHMESKSKMKAANDLF 173
+D R+++ L++AE D F FL + IG S YIA+A H+E++ +++ A+ +
Sbjct: 63 HNDPRFISYCLKFAEYNSDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVL 122
Query: 174 SLGISRNAQPTEKLKDAYKKFLVRSMRKTQVIDEDSKENHLPVRS 218
GI A+P E L+ Y+ F R E HLP ++
Sbjct: 123 QRGIQNQAEPREFLQQQYRLFQTR-----------LTETHLPAQA 156
>sp|P41695|BUB1_YEAST Checkpoint serine/threonine-protein kinase BUB1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=BUB1 PE=1
SV=2
Length = 1021
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 48 HLKKSLLDNRRRLIEAIDKYEGDDPLQPWLECIKWVQEAFPAGGDSSGLVVI---YEQCV 104
L ++ + +RL+ ++ + DDPL +L+ + W+ ++ SG V+ E+C+
Sbjct: 35 QLNQTKIAYEQRLLNDLE--DMDDPLDLFLDYMIWISTSYIEVDSESGQEVLRSTMERCL 92
Query: 105 RRFWHSQCYKDDLRYLNVWLEY-----AENCIDAQVIFSFLDANDIGKTHSVYYIAYALH 159
+ Y++D R+L +W+ Y + N +++ F ++ IG S++Y ++
Sbjct: 93 IYIQDMETYRNDPRFLKIWIWYINLFLSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKL 152
Query: 160 MESKSKMKAANDLFSLGISRNAQPTEKL 187
+E+ A L LG N +P +L
Sbjct: 153 LENAQFFLEAKVLLELGAENNCRPYNRL 180
>sp|O94751|BUB1_SCHPO Checkpoint serine/threonine-protein kinase bub1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=bub1 PE=1 SV=1
Length = 1044
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 68 EGDDPLQPWLECIKWVQEAFPAGGDSSGLVVIYEQCVRRFWHSQCYKDDLRYLNVWL--- 124
E DDP+ W CI+W+ E G ++ ++ + ++ + +D+R+L + L
Sbjct: 45 ELDDPVDVWYRCIEWLLETRFLGMETVNKML--DDAIQYLERCRFALNDVRHLLIQLAKI 102
Query: 125 ----EYAENCIDAQVIFSFLDANDIGKTHSVYYIAYALHMESKSKMKAANDLFSLGISRN 180
E + A F L + IG +++Y Y + + K A+++F +SR
Sbjct: 103 KQSYETPDELQQAAKQFYQLASKGIGLELALFYEEYGSLLIRMQRWKEASEVFHAAVSRE 162
Query: 181 AQPTEKL 187
A+P +L
Sbjct: 163 ARPLVRL 169
>sp|P0CAX0|TIG_CAUCR Trigger factor OS=Caulobacter crescentus (strain ATCC 19089 / CB15)
GN=tig PE=3 SV=1
Length = 452
Score = 35.0 bits (79), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 180 NAQPTE-KLKDAYKKFLVRSMRKTQVIDEDSKENHLPV--RSFGTVLAREENR--RQAMQ 234
+A+ TE +LKD YKK R +R V+ E ++N + V + + RE + QA Q
Sbjct: 337 DAEKTEDQLKDEYKKIAERRVRLGLVLAEIGRKNDVVVTDQELTDAIMREARQYGAQAQQ 396
Query: 235 SSDMQRKKLKPDGNHRAPFSVYKDTNVDI 263
DM R++ RAP +Y+D VD+
Sbjct: 397 VFDMYRQRADLQAALRAP--IYEDKVVDL 423
>sp|B8GX17|TIG_CAUCN Trigger factor OS=Caulobacter crescentus (strain NA1000 / CB15N)
GN=tig PE=3 SV=2
Length = 452
Score = 35.0 bits (79), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 180 NAQPTE-KLKDAYKKFLVRSMRKTQVIDEDSKENHLPV--RSFGTVLAREENR--RQAMQ 234
+A+ TE +LKD YKK R +R V+ E ++N + V + + RE + QA Q
Sbjct: 337 DAEKTEDQLKDEYKKIAERRVRLGLVLAEIGRKNDVVVTDQELTDAIMREARQYGAQAQQ 396
Query: 235 SSDMQRKKLKPDGNHRAPFSVYKDTNVDI 263
DM R++ RAP +Y+D VD+
Sbjct: 397 VFDMYRQRADLQAALRAP--IYEDKVVDL 423
>sp|Q4PB37|CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=CLF1 PE=3 SV=1
Length = 781
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 99 IYEQCVRRFWHSQCYKDDLRYLNVWLEYAENCIDAQVIFSFLDANDIGKTHSVYYIAYAL 158
+YE+ + + SQ +D RY+ +WL YA +F +D D +T +Y A AL
Sbjct: 365 VYERAIAQVPSSQEKRDWRRYIFLWLRYA--------LFEEIDTRDYDRTREIYKAAIAL 416
>sp|O42690|CDR3_CANAX Opaque-specific ABC transporter CDR3 OS=Candida albicans GN=CDR3
PE=2 SV=1
Length = 1501
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 1 MDPETEFLASKKETGNEWELFK---ENVRPLKRG---RNIRLLNDALASHNSFHLKKSLL 54
+DPE+ +SK+ N W+L++ E +P K G +N+R+ DA+ S + +L
Sbjct: 80 LDPESPSFSSKRWVQNMWKLYQSDSEYYKPGKLGVAYKNLRVYGDAIESDYQTTVSNGVL 139
Query: 55 DNRRRLIEAIDKYEGD---DPLQPWLECIK 81
R + K D D L+P IK
Sbjct: 140 KYARNIFNKFRKDNDDYSFDILKPMEGLIK 169
>sp|Q488Q3|RLMG_COLP3 Ribosomal RNA large subunit methyltransferase G OS=Colwellia
psychrerythraea (strain 34H / ATCC BAA-681) GN=rlmG PE=3
SV=1
Length = 392
Score = 31.6 bits (70), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 18 WELFKENVRPLKRGRNIRLL-NDALASHNSFHLKKSLLDNRRRLIEAIDKY 67
W++FK++ R LK+G +R++ N LA +H+K L LI + DK+
Sbjct: 338 WQMFKDSHRVLKKGGELRIIGNQKLA----YHIKLQRLFGNETLIASNDKF 384
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,322,967
Number of Sequences: 539616
Number of extensions: 6455387
Number of successful extensions: 15013
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 14989
Number of HSP's gapped (non-prelim): 27
length of query: 378
length of database: 191,569,459
effective HSP length: 119
effective length of query: 259
effective length of database: 127,355,155
effective search space: 32984985145
effective search space used: 32984985145
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)