Query 017049
Match_columns 378
No_of_seqs 138 out of 1191
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 08:05:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017049.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017049hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 6.5E-58 2.2E-62 440.5 29.7 347 5-368 5-400 (413)
2 1tzs_A Cathepsin E; hydrolase, 100.0 7.7E-58 2.6E-62 432.7 26.5 316 7-375 11-350 (351)
3 1j71_A Candidapepsin, aspartic 100.0 4.1E-58 1.4E-62 431.8 22.8 307 8-376 2-333 (334)
4 3psg_A Pepsinogen; hydrolase(a 100.0 4.8E-58 1.6E-62 436.2 22.7 308 8-367 45-370 (370)
5 2qzx_A Candidapepsin-5; aspart 100.0 2E-57 6.9E-62 428.6 25.3 310 9-377 3-341 (342)
6 3fv3_A SAPP1P-secreted asparti 100.0 5.3E-57 1.8E-61 425.4 27.5 307 9-376 3-338 (339)
7 3pvk_A Candidapepsin-2; hydrol 100.0 2.5E-57 8.6E-62 428.2 24.3 308 9-377 3-341 (342)
8 2apr_A Rhizopuspepsin; hydrola 100.0 1.3E-56 4.4E-61 420.0 25.5 297 15-367 15-324 (325)
9 1mpp_A Pepsin; hydrolase(acid 100.0 1.1E-56 3.8E-61 426.6 24.4 323 5-372 4-360 (361)
10 1am5_A Pepsin, acid proteinase 100.0 3.2E-56 1.1E-60 417.3 26.3 304 9-367 2-324 (324)
11 2x0b_A Renin; hydrolase-hormon 100.0 3.2E-57 1.1E-61 431.4 19.4 306 8-367 50-383 (383)
12 1dpj_A Proteinase A; proteinas 100.0 2.1E-56 7.3E-61 419.4 23.7 306 10-367 4-329 (329)
13 4aa9_A Chymosin; hydrolase, as 100.0 7.8E-57 2.7E-61 420.9 18.2 303 11-367 3-320 (320)
14 3c9x_A Trichoderma reesei aspa 100.0 3.1E-56 1.1E-60 418.1 22.0 310 6-366 3-329 (329)
15 3cms_A Chymosin B; hydrolase, 100.0 2.4E-56 8.3E-61 417.8 20.6 305 7-367 2-323 (323)
16 1htr_B Gastricsin; aspartyl pr 100.0 2.5E-56 8.6E-61 418.9 20.1 299 15-367 12-329 (329)
17 1oew_A Endothiapepsin; hydrola 100.0 3.5E-56 1.2E-60 417.7 20.4 309 6-366 3-329 (329)
18 1ibq_A Aspergillopepsin; aspar 100.0 1.8E-55 6.3E-60 412.1 23.2 309 4-367 1-325 (325)
19 3aup_A SBG7S, BG, basic 7S glo 100.0 1.4E-54 4.9E-59 417.5 29.6 342 7-373 8-399 (403)
20 3k1w_A Renin; protease, altern 100.0 8.2E-56 2.8E-60 417.7 19.2 307 7-367 6-340 (341)
21 1izd_A Aspartic proteinase; su 100.0 3.3E-55 1.1E-59 409.9 19.9 306 6-367 4-323 (323)
22 1miq_A Plasmepsin; aspartic pr 100.0 5.1E-55 1.8E-59 416.0 21.0 302 9-367 52-374 (375)
23 1t6e_X Xylanase inhibitor; two 100.0 8.7E-54 3E-58 409.1 27.9 337 8-368 2-374 (381)
24 1bxo_A Protein (penicillopepsi 100.0 4.6E-55 1.6E-59 409.0 17.7 305 6-367 4-323 (323)
25 1qdm_A Prophytepsin; aspartic 100.0 3.1E-54 1.1E-58 421.4 23.1 320 8-367 41-478 (478)
26 3qvc_A Histo-aspartic protease 100.0 1.4E-54 4.7E-59 420.3 19.2 301 8-367 126-449 (451)
27 2bju_A Plasmepsin II; aspartic 100.0 2.6E-54 8.7E-59 417.9 19.9 305 9-368 128-451 (453)
28 1yg9_A Aspartic protease BLA G 100.0 2.2E-54 7.6E-59 405.5 18.7 303 9-367 7-329 (330)
29 2ewy_A Beta-secretase 2; BACE2 100.0 8.5E-53 2.9E-57 403.1 27.1 312 15-371 13-359 (383)
30 3vf3_A Beta-secretase 1; struc 100.0 1.7E-52 5.7E-57 403.5 28.3 317 15-375 28-382 (402)
31 2qp8_A Beta-secretase 1; BACE1 100.0 2.3E-52 7.9E-57 401.4 27.2 317 15-373 21-373 (395)
32 3lpj_A Beta-secretase 1; alzhe 100.0 2.4E-52 8.4E-57 408.0 27.2 317 15-374 74-427 (455)
33 1wkr_A Polyporopepsin; hydrola 100.0 1.1E-52 3.6E-57 396.0 23.1 300 10-372 4-338 (340)
34 1b5f_A Protein (cardosin A); h 100.0 3.1E-42 1.1E-46 308.2 17.0 216 11-258 5-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 2.5E-38 8.7E-43 283.6 17.4 223 120-367 1-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.8 1.2E-20 4.2E-25 143.0 8.2 84 10-116 4-95 (97)
37 1b5f_B Protein (cardosin A); h 99.6 4.3E-16 1.5E-20 115.9 5.4 73 291-367 12-87 (87)
38 3s8i_A Protein DDI1 homolog 1; 93.2 0.091 3.1E-06 42.1 4.5 28 339-366 108-135 (148)
39 2i1a_A DNA damage-inducible pr 83.5 0.99 3.4E-05 35.7 3.9 28 15-44 25-52 (148)
40 2hs1_A HIV-1 protease; ultra-h 83.1 1.3 4.4E-05 32.5 4.0 28 15-44 7-34 (99)
41 1fmb_A EIAV protease; hydrolas 82.7 1.2 4.2E-05 33.0 3.8 28 15-44 7-34 (104)
42 3ec0_A Protease; HIV-2, inhibi 80.1 1.8 6.1E-05 31.7 3.8 28 15-44 7-34 (99)
43 3s8i_A Protein DDI1 homolog 1; 79.1 1.8 6.1E-05 34.4 3.9 29 15-45 23-51 (148)
44 3liy_A Protease; hydrolase, hy 77.1 2.4 8.2E-05 31.8 3.7 31 16-46 10-43 (116)
45 2hah_A Protease, retropepsin; 75.5 3 0.0001 31.5 4.0 28 15-45 13-40 (116)
46 2i1a_A DNA damage-inducible pr 71.1 4 0.00014 32.1 4.1 27 339-365 109-135 (148)
47 3sqf_A Protease; folded monome 70.7 4.3 0.00015 30.5 3.8 28 17-46 10-37 (114)
48 2rsp_A RSV protease; hydrolase 69.2 4.4 0.00015 31.0 3.7 32 13-46 7-48 (124)
49 3slz_A GAG-Pro-POL polyprotein 65.5 6 0.00021 30.6 3.8 29 15-45 21-49 (132)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 57.5 9.3 0.00032 31.9 3.8 28 15-44 7-34 (203)
51 1lya_B Cathepsin D; lysosomal 37.0 42 0.0015 28.3 5.0 39 8-46 90-137 (241)
52 1fmb_A EIAV protease; hydrolas 36.9 27 0.00094 25.6 3.2 35 210-249 4-38 (104)
53 3ka2_A [L-Ala51;Gly51']HIV-1 p 33.2 38 0.0013 28.1 3.8 28 15-44 111-138 (203)
54 2hs1_A HIV-1 protease; ultra-h 32.7 31 0.0011 25.0 2.9 31 211-246 5-35 (99)
55 3c9x_A Trichoderma reesei aspa 32.3 49 0.0017 29.5 4.8 39 8-46 183-230 (329)
56 1bxo_A Protein (penicillopepsi 30.2 57 0.002 29.0 4.9 41 196-248 5-45 (323)
57 3ec0_A Protease; HIV-2, inhibi 28.7 38 0.0013 24.6 2.7 30 210-244 4-33 (99)
58 3slz_A GAG-Pro-POL polyprotein 28.5 50 0.0017 25.4 3.5 27 215-246 23-49 (132)
59 1izd_A Aspartic proteinase; su 28.1 60 0.002 28.8 4.6 40 7-46 178-225 (323)
60 1yg9_A Aspartic protease BLA G 27.9 40 0.0014 30.1 3.4 39 8-46 184-230 (330)
61 1qdm_A Prophytepsin; aspartic 27.3 75 0.0025 30.2 5.4 38 8-45 222-269 (478)
62 1ibq_A Aspergillopepsin; aspar 27.2 62 0.0021 28.8 4.6 31 210-248 14-44 (325)
63 2hah_A Protease, retropepsin; 27.1 40 0.0014 25.2 2.7 31 210-246 10-40 (116)
64 1oew_A Endothiapepsin; hydrola 25.4 58 0.002 29.0 4.0 39 8-46 182-229 (329)
65 2apr_A Rhizopuspepsin; hydrola 25.2 56 0.0019 29.0 3.9 39 8-46 183-229 (325)
66 2x0b_A Renin; hydrolase-hormon 25.2 83 0.0028 28.8 5.1 40 7-46 232-280 (383)
67 1mpp_A Pepsin; hydrolase(acid 25.1 80 0.0027 28.4 5.0 44 194-247 4-49 (361)
68 4aa9_A Chymosin; hydrolase, as 23.4 96 0.0033 27.3 5.1 39 8-46 177-224 (320)
69 3cms_A Chymosin B; hydrolase, 23.0 92 0.0031 27.5 4.9 44 196-247 2-45 (323)
70 1htr_B Gastricsin; aspartyl pr 23.0 1E+02 0.0035 27.3 5.2 39 8-46 180-228 (329)
71 1tzs_A Cathepsin E; hydrolase, 22.4 69 0.0024 28.8 3.9 39 8-46 192-239 (351)
72 3k1w_A Renin; protease, altern 22.4 84 0.0029 27.9 4.5 39 8-46 190-237 (341)
73 2bju_A Plasmepsin II; aspartic 22.2 1.1E+02 0.0037 28.8 5.4 40 7-46 305-349 (453)
74 1am5_A Pepsin, acid proteinase 21.1 1.1E+02 0.0039 26.9 5.1 38 8-46 179-225 (324)
75 1dpj_A Proteinase A; proteinas 20.6 1.2E+02 0.004 26.9 5.0 39 8-46 183-229 (329)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=6.5e-58 Score=440.55 Aligned_cols=347 Identities=18% Similarity=0.349 Sum_probs=274.5
Q ss_pred ceeeeeeeec-----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCC
Q 017049 5 WIEFFFFPIF-----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHW 79 (378)
Q Consensus 5 ~~~~~~~pl~-----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~ 79 (378)
..+++.+||. +.|+++|.||||||++.|+|||||+++||+|. +| . ....|. .++|.++.|...+.
T Consensus 5 ~~~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~-~c---~--~Sst~~----~v~C~s~~C~~~~~ 74 (413)
T 3vla_A 5 RPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD-QN---Y--VSSTYR----PVRCRTSQCSLSGS 74 (413)
T ss_dssp CCSEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SS---C--CCTTCE----ECBTTSHHHHHTTC
T ss_pred CCccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC-CC---C--CCCCcC----ccCCCccccccccc
Confidence 4678999999 89999999999999999999999999999988 54 2 111222 48999999987654
Q ss_pred CC--------CCCCCCCCCCCeeEeEe-CCCCeEEEEEEEEEEEEeecCCc-----cccccEEEeeeeecCCCCCCCCCC
Q 017049 80 PN--------PPRCKHPNDQCDYEIEY-GDGGSSIGALVTDLFPLRFSNGS-----VFNVPLTFGCGYNQHNPGPLSPPD 145 (378)
Q Consensus 80 ~~--------t~~~~~~~~~~~~~~~y-~~g~~~~G~~~~D~v~l~~~~g~-----~~~~~~~fg~~~~~~~~~~~~~~~ 145 (378)
.. ...|. ++.|.|.+.| ++++.+.|.+++|+|+|+..+|. +.++++.|||+........ ...
T Consensus 75 ~~~~~c~s~~~~~c~--~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~--~~~ 150 (413)
T 3vla_A 75 IACGDCFNGPRPGCN--NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNL--ASG 150 (413)
T ss_dssp CEEECCSSCCBTTBC--SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTS--CTT
T ss_pred CCCcccccCCCCCCC--CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCc--ccc
Confidence 31 11233 3679999999 48778999999999999765543 5678999999998622221 256
Q ss_pred cceEEeeCCCCChHHHHHhhcCCccCeEEEEeCC--CCceeEEeCCC--C-----CCCCC-ceeeeCccCCCC-------
Q 017049 146 TAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQ--NGRGVLFLGDG--K-----VPSSG-VAWTPMLQNSAD------- 208 (378)
Q Consensus 146 ~~GilGLg~~~~s~~~~l~~~~~i~~~fsl~l~~--~~~G~l~fGd~--~-----~~~g~-l~~~p~~~~~~~------- 208 (378)
.+||||||++..+++.||.+++.++++||+||.+ +..|.|+||+. . ++.++ ++|+|+......
T Consensus 151 ~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~ 230 (413)
T 3vla_A 151 VVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQ 230 (413)
T ss_dssp CCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCT
T ss_pred cccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccc
Confidence 8999999999999999999998889999999986 46899999932 2 25678 999999876321
Q ss_pred ---CcceEeeeeEEEeCCEEeccC----------CCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCC
Q 017049 209 ---LKHYILGPAELLYSGKSCGLK----------DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLP 275 (378)
Q Consensus 209 ---~~~w~v~l~~i~v~~~~~~~~----------~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~ 275 (378)
..+|.|.|++|+||++.+... ...+||||||++++||.++|++|.+++.+.+....+........+.
T Consensus 231 ~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~ 310 (413)
T 3vla_A 231 GEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFG 310 (413)
T ss_dssp TCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCS
T ss_pred cCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCc
Confidence 269999999999999998654 3689999999999999999999999999876421233222334456
Q ss_pred ceeeCCccCccccccccccEEEEEcCCCcceEEEeCCCceEEEeCCccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEe
Q 017049 276 ICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYD 355 (378)
Q Consensus 276 ~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~l~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD 355 (378)
.|+..++.........+|+|+|+|+++ ++.|.|++++|+++..++..|++++.... ...+.||||+.|||++|+|||
T Consensus 311 ~C~~~~~~~~~~~~~~lP~i~f~f~g~--~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~-~~~~~~IlGd~fl~~~~vvfD 387 (413)
T 3vla_A 311 ACFSTDNILSTRLGPSVPSIDLVLQSE--SVVWTITGSNSMVYINDNVVCLGVVDGGS-NLRTSIVIGGHQLEDNLVQFD 387 (413)
T ss_dssp CEEECTTCCEETTEECCCCEEEECSST--TCEEEECHHHHEEEEETTEEEECEEEEES-SCSSSEEECHHHHTTEEEEEE
T ss_pred ceeccCCccccccccCCCcEEEEEcCC--cEEEEeCccceEEEeCCCcEEEEEEecCC-CcccceeEehhhhcCeEEEEE
Confidence 799876543323345799999999874 48999999999997666778998776432 123589999999999999999
Q ss_pred CCCCEEeeecCCC
Q 017049 356 NEKQRIGWKPEDC 368 (378)
Q Consensus 356 ~~~~rigfa~~~c 368 (378)
++++|||||++.+
T Consensus 388 ~~~~riGfa~~~~ 400 (413)
T 3vla_A 388 LATSRVGFSGTLL 400 (413)
T ss_dssp TTTTEEEEEEEGG
T ss_pred CCCCEEEEEEecc
Confidence 9999999999643
No 2
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=7.7e-58 Score=432.71 Aligned_cols=316 Identities=19% Similarity=0.340 Sum_probs=252.1
Q ss_pred eeeeeeec----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCC--CCCCCCCCCCCCCCCcccCCchhccCCCCC
Q 017049 7 EFFFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT--GCTKPPEKQYKPHKNIVPCSNPRCAALHWP 80 (378)
Q Consensus 7 ~~~~~pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~--~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~ 80 (378)
..+.+||. ..|+++|.||||||+++|+|||||+++||+|. .|. .|. .+..|+|++|+
T Consensus 11 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss-------------- 73 (351)
T 1tzs_A 11 QSAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSV-YCTSPACK--THSRFQPSQSS-------------- 73 (351)
T ss_dssp ---CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGT--TSCCBCGGGCT--------------
T ss_pred CccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccC--CCCcCCcccCc--------------
Confidence 34457777 78999999999999999999999999999999 897 565 67899999993
Q ss_pred CCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCC----
Q 017049 81 NPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR---- 156 (378)
Q Consensus 81 ~t~~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~---- 156 (378)
|++. .+|.|.+.|++| .+.|.+++|+|+| |++.++++.|||+....+. .+.....+||||||++.
T Consensus 74 -T~~~----~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~ 142 (351)
T 1tzs_A 74 -TYSQ----PGQSFSIQYGTG-SLSGIIGADQVSV----EGLTVVGQQFGESVTEPGQ-TFVDAEFDGILGLGYPSLAVG 142 (351)
T ss_dssp -TCBC----CSCEEEEESSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEECSCCCG-GGGGCSCSEEEECSCGGGSGG
T ss_pred -ceEE----CCCEEEEEeCCC-CeEEEEEEeEEEE----CCeEECCeEEEEEEecccc-ccccCCCceEEecCCcccccc
Confidence 6654 778999999999 6899999999999 8888999999999876321 12235689999999965
Q ss_pred --ChHHHHHhhcCCc-cCeEEEEeCCCC----ceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEec
Q 017049 157 --ISIVSQLREYGLI-RNVIGHCIGQNG----RGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCG 227 (378)
Q Consensus 157 --~s~~~~l~~~~~i-~~~fsl~l~~~~----~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~ 227 (378)
.+++++|+++|+| +++||+||.+.. .|.|+|| |++++.|++.|+|+... .+|.|.|++|+|+++.+.
T Consensus 143 ~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~ 218 (351)
T 1tzs_A 143 GVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQ----AYWQIALDNIQVGGTVMF 218 (351)
T ss_dssp GCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEE----TTEEEEEEEEEETTEEEE
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCC----ceEEEEeCEEEECCceEE
Confidence 3589999999999 999999998642 7999999 78899999999999875 899999999999998853
Q ss_pred -cCCCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcce
Q 017049 228 -LKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSV 306 (378)
Q Consensus 228 -~~~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~ 306 (378)
..+..++|||||++++||.+++++|.+++++... . . .|..+|... ..+|+|+|+|++ .
T Consensus 219 ~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~----g----~~~~~C~~~----~~~P~i~f~f~g----~ 277 (351)
T 1tzs_A 219 CSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV-----D----G----EYAVECANL----NVMPDVTFTING----V 277 (351)
T ss_dssp CTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC-----S----S----SEEECGGGG----GGSCCEEEEETT----E
T ss_pred cCCCceEEeccCCcceeCCHHHHHHHHHHhCCccc-----C----C----eEEEeCCCC----ccCCcEEEEECC----E
Confidence 4567899999999999999999999999965432 0 0 133344432 257999999964 8
Q ss_pred EEEeCCCceEEEeCC--ccEEEEEEcCCCC--CCCCceeEcceeeeeeEEEEeCCCCEEeeecCCCCcccccc
Q 017049 307 RLVVPPEAYLVISGR--KNVCLGILNGSEA--EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLN 375 (378)
Q Consensus 307 ~~~l~~~~~~~~~~~--~~~C~~~~~~~~~--~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~c~~~~~~~ 375 (378)
.+.|++++|+++... +..|+..+...+. +..+.||||++|||++|+|||++++|||||+++|+..++||
T Consensus 278 ~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s~~~~~ 350 (351)
T 1tzs_A 278 PYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWSHPQFE 350 (351)
T ss_dssp EEEECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC--------
T ss_pred EEEECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcccchhhc
Confidence 999999999986432 3579854432221 13468999999999999999999999999999999888876
No 3
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=4.1e-58 Score=431.84 Aligned_cols=307 Identities=18% Similarity=0.322 Sum_probs=259.6
Q ss_pred eeeeeec---ceEEEEEeecCCCcEEEEEEecCCCceeEeCCC-CCCCC-------CCCCCCCCCCCCCcccCCchhccC
Q 017049 8 FFFFPIF---SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDA-PCTGC-------TKPPEKQYKPHKNIVPCSNPRCAA 76 (378)
Q Consensus 8 ~~~~pl~---~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~-~c~~c-------~~~~~~~y~~~~S~v~c~~~~C~~ 76 (378)
.+.+||. ..|+++|.||||||+++|+|||||+++||+|.. +|..| .+..++.|+|++|+
T Consensus 2 ~~~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~Ss---------- 71 (334)
T 1j71_A 2 DVPTTLINEGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSS---------- 71 (334)
T ss_dssp CEEEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCT----------
T ss_pred ceeEEEecCCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCC----------
Confidence 4678888 899999999999999999999999999998541 46543 12356789999883
Q ss_pred CCCCCCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCC
Q 017049 77 LHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR 156 (378)
Q Consensus 77 ~~~~~t~~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~ 156 (378)
|++. ..|.|.+.|++|+.+.|.+++|+|+| |++.++++.||+++.. ...+||||||+..
T Consensus 72 -----T~~~----~~~~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~~~~~~fg~~~~~--------~~~~GilGLg~~~ 130 (334)
T 1j71_A 72 -----SAQN----LNQDFSIEYGDLTSSQGSFYKDTVGF----GGISIKNQQFADVTTT--------SVDQGIMGIGFTA 130 (334)
T ss_dssp -----TCEE----EEEEEEEEBTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE--------SSSSCEEECSCGG
T ss_pred -----Cccc----CCCceEEEECCCCEEEEEEEEEEEEE----CCEEEccEEEEEEEec--------CCCccEEEEcCCc
Confidence 6553 67899999999977899999999999 8888999999999987 2579999999965
Q ss_pred C--------hHHHHHhhcCCc-cCeEEEEeCC--CCceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCC
Q 017049 157 I--------SIVSQLREYGLI-RNVIGHCIGQ--NGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSG 223 (378)
Q Consensus 157 ~--------s~~~~l~~~~~i-~~~fsl~l~~--~~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~ 223 (378)
. +|+++|+++++| +++||+||.+ ...|.|+|| |++++.|++.|+|+... .+|.|.+++|.|++
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g 206 (334)
T 1j71_A 131 DEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS----VELRVHLGSINFDG 206 (334)
T ss_dssp GSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS----SSCEEEEEEEEETT
T ss_pred ccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCC----CeEEEEEeEEEECC
Confidence 3 899999999999 8999999985 468999999 88899999999999876 79999999999999
Q ss_pred EEeccCCCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceee-CCccCccccccccccEEEEEcCC
Q 017049 224 KSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWR-GPFKALGQVTEYFKPLALSFTNR 302 (378)
Q Consensus 224 ~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~-~~~~~~~~~~~~~P~l~~~f~~~ 302 (378)
+.+.. +..++|||||++++||.+++++|.+++++.... . ...|. .+|.. +|.|+|+|.+
T Consensus 207 ~~~~~-~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~~--------~---~~~~~~~~C~~-------~p~i~f~f~~- 266 (334)
T 1j71_A 207 TSVST-NADVVLDSGTTITYFSQSTADKFARIVGATWDS--------R---NEIYRLPSCDL-------SGDAVFNFDQ- 266 (334)
T ss_dssp EEEEE-EEEEEECTTCSSEEECHHHHHHHHHHHTCEEET--------T---TTEEECSSSCC-------CSEEEEEEST-
T ss_pred EeccC-CccEEEeCCCCcEecCHHHHHHHHHHcCCcccC--------C---CceEEEEcCCC-------CCceEEEEcC-
Confidence 88764 467999999999999999999999999775420 0 11233 34432 6899999975
Q ss_pred CcceEEEeCCCceEEEeCCccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCCCCccccccc
Q 017049 303 RNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLNH 376 (378)
Q Consensus 303 ~~~~~~~l~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~c~~~~~~~~ 376 (378)
+..+.||+++|+++..++..|+..+... +.||||++|||++|+|||++++|||||+++|+++++|.+
T Consensus 267 --g~~~~i~~~~y~~~~~~~~~C~~~i~~~-----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~i~~ 333 (334)
T 1j71_A 267 --GVKITVPLSELILKDSDSSICYFGISRN-----DANILGDNFLRRAYIVYDLDDKTISLAQVKYTSSSDISA 333 (334)
T ss_dssp --TCEEEEEGGGGEEECSSSSCEEESEEEC-----TTCEECHHHHTTEEEEEETTTTEEEEEEECCCSCCCEEE
T ss_pred --CcEEEECHHHheeecCCCCeeEEEEeEC-----CCcEEChHhhccEEEEEECCCCEEEEEecCCCCccceEE
Confidence 5899999999999865555698766543 359999999999999999999999999999999988876
No 4
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=4.8e-58 Score=436.17 Aligned_cols=308 Identities=20% Similarity=0.356 Sum_probs=256.5
Q ss_pred eeeeeec----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCCCC
Q 017049 8 FFFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPP 83 (378)
Q Consensus 8 ~~~~pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t~ 83 (378)
....||. ..|+++|.||||||+++|+|||||+++||+|. .|..|.+..+..|+|++|+ |+
T Consensus 45 ~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~-~C~~~~C~~~~~y~~~~Ss---------------T~ 108 (370)
T 3psg_A 45 IGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV-YCSSLACSDHNQFNPDDSS---------------TF 108 (370)
T ss_dssp SCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGTTSCCBCGGGCT---------------TC
T ss_pred cceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECC-CCCCcccCCCCCCCCccCc---------------Cc
Confidence 4456777 79999999999999999999999999999998 8987666688999999993 66
Q ss_pred CCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCC------C
Q 017049 84 RCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------I 157 (378)
Q Consensus 84 ~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~------~ 157 (378)
+. .++.|.+.|++| .+.|.+++|+|+| |++.++++.||++...... .+....++||||||++. .
T Consensus 109 ~~----~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~~~~Fg~a~~~~~~-~~~~~~~dGIlGLg~~~~s~~~~~ 178 (370)
T 3psg_A 109 EA----TSQELSITYGTG-SMTGILGYDTVQV----GGISDTNQIFGLSETEPGS-FLYYAPFDGILGLAYPSISASGAT 178 (370)
T ss_dssp EE----EEEEEEEESSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEECSCCCG-GGGGCSCSEEEECSCGGGCGGGCC
T ss_pred EE----CCcEEEEEeCCc-eEEEEEEEEEEee----CCcccCCeEEEEEEeeccc-ccccCCccceeccCCccccccCCC
Confidence 64 678999999999 6999999999999 8888999999999877331 12235689999999955 4
Q ss_pred hHHHHHhhcCCc-cCeEEEEeCCC--CceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEecc-CCC
Q 017049 158 SIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL-KDL 231 (378)
Q Consensus 158 s~~~~l~~~~~i-~~~fsl~l~~~--~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~-~~~ 231 (378)
+++++|+++|+| +++||+||.+. ..|.|+|| |++++.|++.|+|+... .+|.|.+++|+|+++.+.. .+.
T Consensus 179 ~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~----~~w~v~l~~i~v~g~~~~~~~~~ 254 (370)
T 3psg_A 179 PVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE----GYWQITLDSITMDGETIACSGGC 254 (370)
T ss_dssp CHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE----TTEEEEECEEESSSSEEECTTCE
T ss_pred CHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccccc----ceeEEEEeEEEECCEEEecCCCc
Confidence 689999999999 99999999864 58999999 88999999999999976 8999999999999987754 567
Q ss_pred cEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcceEEEeC
Q 017049 232 TLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVP 311 (378)
Q Consensus 232 ~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~l~ 311 (378)
.++|||||+++++|.+++++|.+++++... . ..+|..+|... ..+|+|+|+|++ ..+.||
T Consensus 255 ~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~--------~----~g~~~v~C~~~----~~lP~i~f~~~g----~~~~l~ 314 (370)
T 3psg_A 255 QAIVDTGTSLLTGPTSAIANIQSDIGASEN--------S----DGEMVISCSSI----DSLPDIVFTIDG----VQYPLS 314 (370)
T ss_dssp EEEECTTCCSEEEEHHHHHHHHHHTTCEEC--------T----TCCEECCGGGG----GGCCCEEEEETT----EEEEEC
T ss_pred eEEEcCCCCcEECCHHHHHHHHHHhCCccc--------C----CCcEEEECCCc----ccCCcEEEEECC----EEEEEC
Confidence 999999999999999999999999976432 0 11344455543 257999999965 899999
Q ss_pred CCceEEEeCCccEEEEEEcCCCC--CCCCceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 312 PEAYLVISGRKNVCLGILNGSEA--EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 312 ~~~~~~~~~~~~~C~~~~~~~~~--~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
+++|+++ . +..|+..+...+. ..+..||||++|||++|+|||++++|||||+++
T Consensus 315 ~~~yi~~-~-~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 315 PSAYILQ-D-DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp HHHHEEE-C-SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HHHhccc-C-CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 9999997 3 3459865543221 123469999999999999999999999999975
No 5
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=2e-57 Score=428.60 Aligned_cols=310 Identities=20% Similarity=0.366 Sum_probs=259.2
Q ss_pred eeeeec---ceEEEEEeecCCCcEEEEEEecCCCceeEeCCC-CCCCC-------CCCCCCCCCCCCCcccCCchhccCC
Q 017049 9 FFFPIF---SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDA-PCTGC-------TKPPEKQYKPHKNIVPCSNPRCAAL 77 (378)
Q Consensus 9 ~~~pl~---~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~-~c~~c-------~~~~~~~y~~~~S~v~c~~~~C~~~ 77 (378)
+.+||. ..|+++|.||||||+++|+|||||+++||+|.. +|..| .+..++.|+|++|+
T Consensus 3 v~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~Ss----------- 71 (342)
T 2qzx_A 3 VAVTLHNEAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSR----------- 71 (342)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCT-----------
T ss_pred eeEEEecCCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCC-----------
Confidence 567777 899999999999999999999999999998541 46533 12356789999883
Q ss_pred CCCCCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCCC
Q 017049 78 HWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRI 157 (378)
Q Consensus 78 ~~~~t~~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~~ 157 (378)
|++. ..|.|.+.|++|+.+.|.+++|+|+| |++.++++.|||++.. ...+||||||+...
T Consensus 72 ----T~~~----~~~~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~--------~~~~GilGLg~~~~ 131 (342)
T 2qzx_A 72 ----TSQN----LNTRFDIKYGDGSYAKGKLYKDTVGI----GGVSVRDQLFANVWST--------SARKGILGIGFQSG 131 (342)
T ss_dssp ----TCEE----EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE--------CSSSCEEECSCGGG
T ss_pred ----Cccc----CCCcEEEEeCCCCeEEEEEEEEEEEE----CCEEecceEEEEEEec--------CCCcCEEEEccccc
Confidence 6553 67899999999977899999999999 8888899999999986 25799999999643
Q ss_pred --------hHHHHHhhcCCc-cCeEEEEeCC--CCceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCE
Q 017049 158 --------SIVSQLREYGLI-RNVIGHCIGQ--NGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGK 224 (378)
Q Consensus 158 --------s~~~~l~~~~~i-~~~fsl~l~~--~~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~ 224 (378)
+|+++|+++++| +++||+||.+ ...|.|+|| |++++.|++.|+|+... .+|.|.+++|+|+++
T Consensus 132 ~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~ 207 (342)
T 2qzx_A 132 EATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSE----KKLTVGLRSVNVRGR 207 (342)
T ss_dssp CSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS----SSCEEEEEEEEETTE
T ss_pred cCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCC----ceEEEEEeEEEECCE
Confidence 899999999999 8999999985 468999999 88899999999999876 789999999999998
Q ss_pred EeccCCCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCc
Q 017049 225 SCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRN 304 (378)
Q Consensus 225 ~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~ 304 (378)
.+.. +..++|||||++++||.+++++|.+++.+... ... .....|..+|.. +|.|+|+|.+
T Consensus 208 ~~~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~-----~~~~~~~~~C~~-------~p~i~f~f~~--- 268 (342)
T 2qzx_A 208 NVDA-NTNVLLDSGTTISYFTRSIVRNILYAIGAQMK---FDS-----AGNKVYVADCKT-------SGTIDFQFGN--- 268 (342)
T ss_dssp EEEE-EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE---ECT-----TSCEEEEECTTC-------CCEEEEEETT---
T ss_pred ecCC-CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeee---ecc-----CCCcEEEEECCC-------CCcEEEEECC---
Confidence 8764 46799999999999999999999999987543 000 011134445532 6899999975
Q ss_pred ceEEEeCCCceEEEe-----CCccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCCCCcccccccc
Q 017049 305 SVRLVVPPEAYLVIS-----GRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLNHF 377 (378)
Q Consensus 305 ~~~~~l~~~~~~~~~-----~~~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~c~~~~~~~~~ 377 (378)
+.++.||+++|+++. ..+..|+..+... +.||||++|||++|+|||++++|||||+++|+++++|.+.
T Consensus 269 g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~-----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~i~~i 341 (342)
T 2qzx_A 269 NLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES-----EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTSESDIVAI 341 (342)
T ss_dssp TEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC-----SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEEC
T ss_pred CcEEEEcHHHhcccccccCCCCCCccEEEEecC-----CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCCCCCeEEc
Confidence 699999999999863 2235798766543 3599999999999999999999999999999999998764
No 6
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=5.3e-57 Score=425.41 Aligned_cols=307 Identities=19% Similarity=0.322 Sum_probs=259.8
Q ss_pred eeeeec---ceEEEEEeecCCCcEEEEEEecCCCceeEe-----CCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCC
Q 017049 9 FFFPIF---SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQ-----CDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWP 80 (378)
Q Consensus 9 ~~~pl~---~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~-----~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~ 80 (378)
+.+||. ..|+++|.||||||+++|+|||||+++||+ |. +|..|. .+..|+|++|+
T Consensus 3 i~~~l~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~-~~~~C~--~~~~y~~~~Ss-------------- 65 (339)
T 3fv3_A 3 ISLSLINEGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCG-KGVDCK--SSGTFTPSSSS-------------- 65 (339)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEEC-TTCCTT--TTCCBCGGGCT--------------
T ss_pred eeeEEEcCCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCC-CCCCCC--CCCcCCCccCc--------------
Confidence 678888 899999999999999999999999999998 66 566776 57899999993
Q ss_pred CCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCCC---
Q 017049 81 NPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRI--- 157 (378)
Q Consensus 81 ~t~~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~~--- 157 (378)
|++. ..|.|.+.|++|+.+.|.+++|+|+| |++.++++.||+++... ..+||||||++..
T Consensus 66 -T~~~----~~~~~~i~Yg~gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~--------~~~GilGLg~~~~~~~ 128 (339)
T 3fv3_A 66 -SYKN----LGAAFTIRYGDGSTSQGTWGKDTVTI----NGVSITGQQIADVTQTS--------VDQGILGIGYTSNEAV 128 (339)
T ss_dssp -TCEE----EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEES--------SSSCEEECSCGGGCCC
T ss_pred -ceee----CCceEEEEECCCceEEEEEEEEEEEE----CCEEECceEEEEEEecC--------CCceeEEecCcccccc
Confidence 6664 67899999999999999999999999 88889999999999872 3699999999543
Q ss_pred -------------hHHHHHhhcCCc-cCeEEEEeCCC--CceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEE
Q 017049 158 -------------SIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAEL 219 (378)
Q Consensus 158 -------------s~~~~l~~~~~i-~~~fsl~l~~~--~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i 219 (378)
+|+++|+++|+| +++||+||.+. ..|.|+|| |++++.|++.|+|+... .+|.|.+++|
T Consensus 129 ~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i 204 (339)
T 3fv3_A 129 YDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSS----QALTISLASV 204 (339)
T ss_dssp BCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCS----SSCEEEEEEE
T ss_pred ccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccC----ccEEEEEEEE
Confidence 399999999999 99999999854 48999999 88999999999999886 7899999999
Q ss_pred EeCCEEeccCCCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEE
Q 017049 220 LYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSF 299 (378)
Q Consensus 220 ~v~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f 299 (378)
.++++.+.. +..++|||||++++||.+++++|++++++..... .....-|..+|.. ..+|.|+|+|
T Consensus 205 ~v~g~~~~~-~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~--------~~~~~~~~~~C~~-----~~~p~i~f~f 270 (339)
T 3fv3_A 205 NLKGSSFSF-GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQV--------ARDQYLYFIDCNT-----DTSGTTVFNF 270 (339)
T ss_dssp EESSCEEEE-EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE--------ETTEEEEEECTTC-----CCCSEEEEEE
T ss_pred EECCEeecC-CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc--------cccCceEEEecCC-----CCCCcEEEEE
Confidence 999988765 3679999999999999999999999998654300 0001123334543 2479999999
Q ss_pred cCCCcceEEEeCCCceEEEeCCccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCCCCccccccc
Q 017049 300 TNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLNH 376 (378)
Q Consensus 300 ~~~~~~~~~~l~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~c~~~~~~~~ 376 (378)
++ +..+.||+++|+++.. +..|+..+... +.||||++|||++|+|||++++|||||+++|+++++|.+
T Consensus 271 ~~---g~~~~v~~~~~~~~~~-~~~C~~~i~~~-----~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~i~~ 338 (339)
T 3fv3_A 271 GN---GAKITVPNTEYVYQNG-DGTCLWGIQPS-----DDTILGDNFLRHAYLLYNLDANTISIAQVKYTTDSSISA 338 (339)
T ss_dssp TT---SCEEEEEGGGGEEECS-SSCEEESEEEC-----SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEE
T ss_pred CC---CCEEEECHHHheeeCC-CCeEEEEEEeC-----CcEEeChHHHhCEEEEEECCCCEEEEEecCCCCccceEE
Confidence 85 5899999999998753 45685444332 469999999999999999999999999999999988875
No 7
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=2.5e-57 Score=428.18 Aligned_cols=308 Identities=19% Similarity=0.356 Sum_probs=259.1
Q ss_pred eeeeec---ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCC--CC---------CCCCCCCCCCCCCCCcccCCchhc
Q 017049 9 FFFPIF---SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAP--CT---------GCTKPPEKQYKPHKNIVPCSNPRC 74 (378)
Q Consensus 9 ~~~pl~---~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~--c~---------~c~~~~~~~y~~~~S~v~c~~~~C 74 (378)
+.+|+. ..|+++|.||||||+++|++||||+++||+|. + |. .|. .+..|+|++|+
T Consensus 3 v~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~~~C~~~~~~~~~~~C~--~~~~y~~~~Ss-------- 71 (342)
T 3pvk_A 3 VPVTLHNEQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDV-NVDCQVTYSDQTADFCK--QKGTYDPSGSS-------- 71 (342)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEE-EEEECCCSTTCCTTGGG--TTCCBCGGGCT--------
T ss_pred cceEEecCCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcC-CCCCcccccccccCCCC--CCCcCCCccCc--------
Confidence 556777 89999999999999999999999999999865 3 53 343 57899999983
Q ss_pred cCCCCCCCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCC
Q 017049 75 AALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGR 154 (378)
Q Consensus 75 ~~~~~~~t~~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~ 154 (378)
|++. ..|.|.+.|++|+.+.|.+++|+|+| |++.++++.||+++.. ...+||||||+
T Consensus 72 -------T~~~----~~~~~~i~Yg~gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~--------~~~~GilGLg~ 128 (342)
T 3pvk_A 72 -------ASQD----LNTPFKIGYGDGSSSQGTLYKDTVGF----GGVSIKNQVLADVDST--------SIDQGILGVGY 128 (342)
T ss_dssp -------TCEE----EEEEEEEECSSSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE--------SSSSCEEECSC
T ss_pred -------ceee----cCCeEEEEecCCCeEEEEEEEEEEEE----CCEEecceEEEEEEcc--------CCCccEEEecC
Confidence 6664 67899999999977999999999999 8888999999999887 25799999999
Q ss_pred CC-------ChHHHHHhhcCCc-cCeEEEEeCC--CCceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeC
Q 017049 155 GR-------ISIVSQLREYGLI-RNVIGHCIGQ--NGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYS 222 (378)
Q Consensus 155 ~~-------~s~~~~l~~~~~i-~~~fsl~l~~--~~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~ 222 (378)
+. .+|+++|+++|+| +++||+||.+ ...|.|+|| |++++.|++.|+|+... .+|.|.+++|.++
T Consensus 129 ~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~ 204 (342)
T 3pvk_A 129 KTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSD----RELRISLGSVEVS 204 (342)
T ss_dssp GGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS----SSCEEEEEEEEET
T ss_pred ccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCcc----ceEEEEEeEEEEC
Confidence 66 5799999999999 9999999985 357999999 88999999999999887 6899999999999
Q ss_pred CEEeccCCCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCC
Q 017049 223 GKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNR 302 (378)
Q Consensus 223 ~~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~ 302 (378)
++.+...+..++|||||++++||.+++++|.+++++..... .....+|..+|.. .|+|+|+|++
T Consensus 205 g~~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~--------~~~~~~~~~~C~~-------~p~i~f~f~~- 268 (342)
T 3pvk_A 205 GKTINTDNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQD--------SNGNSFYEVDCNL-------SGDVVFNFSK- 268 (342)
T ss_dssp TEEEEEEEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEEC--------TTSCEEEEECSCC-------CSEEEEEEST-
T ss_pred CEEecCCCceEEEeCCCCCeecCHHHHHHHHHHcCCeeccc--------CCCceEEEEecCC-------CCceEEEECC-
Confidence 99987766789999999999999999999999997765310 0011234445543 4899999986
Q ss_pred CcceEEEeCCCceEEEeC--Cc---cEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCCCCcccccccc
Q 017049 303 RNSVRLVVPPEAYLVISG--RK---NVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLNHF 377 (378)
Q Consensus 303 ~~~~~~~l~~~~~~~~~~--~~---~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~c~~~~~~~~~ 377 (378)
+.++.||+++|+++.. .+ ..|+..+... +.||||++|||++|+|||++++|||||+++|+++++|.++
T Consensus 269 --g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~-----~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~iv~i 341 (342)
T 3pvk_A 269 --NAKISVPASEFAASLQGDDGQPYDKCQLLFDVN-----DANILGDNFLRSAYIVYDLDDNEISLAQVKYTSASSISAL 341 (342)
T ss_dssp --TCEEEEEGGGGEEC----------CEEESEEEC-----TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEEC
T ss_pred --CCEEEEcHHHheeeccccCCCcCCeeEEEEeeC-----CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCCCCCEEEe
Confidence 5889999999998521 22 6797666543 4799999999999999999999999999999998888764
No 8
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.3e-56 Score=419.97 Aligned_cols=297 Identities=22% Similarity=0.394 Sum_probs=251.2
Q ss_pred ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCCCCCCCCCCCCCee
Q 017049 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDY 94 (378)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t~~~~~~~~~~~~ 94 (378)
..|+++|.||||||+++|+|||||+++||+|. +|..| ++.++.|+|++|+ |++. ..|.|
T Consensus 15 ~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~c-~~~~~~y~~~~Ss---------------T~~~----~~~~~ 73 (325)
T 2apr_A 15 IEYYGQVTIGTPGKKFNLDFDTGSSDLWIAST-LCTNC-GSGQTKYDPNQSS---------------TYQA----DGRTW 73 (325)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCSSC-CTTSCCBCGGGCT---------------TCEE----EEEEE
T ss_pred CEEEEEEEECCCCeEEEEEEcCCCCCEEEccC-CCchH-hcCCCCCCcccCC---------------Ceee----CCCEE
Confidence 89999999999999999999999999999999 99999 7778899999983 6654 67899
Q ss_pred EeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCC-------ChHHHHHhhcC
Q 017049 95 EIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR-------ISIVSQLREYG 167 (378)
Q Consensus 95 ~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~-------~s~~~~l~~~~ 167 (378)
.+.|++|+.+.|.+++|+|+| |+..++++.|||++..... +.....+||||||+.. .+++++|+++|
T Consensus 74 ~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~--f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg 147 (325)
T 2apr_A 74 SISYGDGSSASGILAKDNVNL----GGLLIKGQTIELAKREAAS--FASGPNDGLLGLGFDTITTVRGVKTPMDNLISQG 147 (325)
T ss_dssp EEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHH--HHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTT
T ss_pred EEEECCCCCEEEEEEEEEEEE----CCEEECcEEEEEEeccCcc--cccCCCceEEEeCCcccccccCCCCHHHHHHhcC
Confidence 999999977999999999999 8888999999999886332 2123489999999954 36899999999
Q ss_pred Cc-cCeEEEEeC---CCCceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEeccCCCcEEEecCCcc
Q 017049 168 LI-RNVIGHCIG---QNGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASY 241 (378)
Q Consensus 168 ~i-~~~fsl~l~---~~~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDSGt~~ 241 (378)
++ +++||+||. ....|.|+|| |++++.|++.|+|+... ..+|.|.+++|+|++ .+...+..++|||||++
T Consensus 148 ~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~vg~-~~~~~~~~~iiDSGTs~ 223 (325)
T 2apr_A 148 LISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNS---RGWWGITVDRATVGT-STVASSFDGILDTGTTL 223 (325)
T ss_dssp SCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCT---TSSCEEEECEEEETT-EEEECCEEEEECTTCSS
T ss_pred CCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCC---CCEEEEEEeEEEECC-EecCCCceEEEecCCcc
Confidence 99 999999995 3568999999 78899999999999754 379999999999999 45455679999999999
Q ss_pred eeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcceEEEeCCCceEEEeCC
Q 017049 242 AYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGR 321 (378)
Q Consensus 242 ~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~l~~~~~~~~~~~ 321 (378)
++||.++++++.+++.+.+.+. . -|..+|.. ..+|+|+|+|++ ..+.||+++|+++..
T Consensus 224 ~~lP~~~~~~~~~~~~~~~~~~--------g----~~~~~C~~-----~~~p~i~f~f~g----~~~~ip~~~~~~~~~- 281 (325)
T 2apr_A 224 LILPNNIAASVARAYGASDNGD--------G----TYTISCDT-----SAFKPLVFSING----ASFQVSPDSLVFEEF- 281 (325)
T ss_dssp EEEEHHHHHHHHHHHTCEECSS--------S----CEEECSCG-----GGCCCEEEEETT----EEEEECGGGGEEEEE-
T ss_pred EECCHHHHHHHHHHHhcccCCC--------C----eEEEECCC-----CCCCcEEEEECC----EEEEECHHHEEEcCC-
Confidence 9999999999999998765421 0 12233432 248999999987 499999999998644
Q ss_pred ccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 322 KNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 322 ~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
+..|+..+...+ .+.||||++|||++|+|||++++|||||+++
T Consensus 282 ~~~C~~~i~~~~---~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 282 QGQCIAGFGYGN---WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp TTEEEESEEEES---SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCeEEEEEEcCC---CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 667987665432 4579999999999999999999999999975
No 9
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.1e-56 Score=426.59 Aligned_cols=323 Identities=20% Similarity=0.336 Sum_probs=262.5
Q ss_pred ceeeeeeeec----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCC---CCCCCCCCCCCCCCCcccCCchhccCC
Q 017049 5 WIEFFFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT---GCTKPPEKQYKPHKNIVPCSNPRCAAL 77 (378)
Q Consensus 5 ~~~~~~~pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~---~c~~~~~~~y~~~~S~v~c~~~~C~~~ 77 (378)
.++...+||. ..|+++|.||||||+++|+|||||+++||+|. +|. .|. .++.|+|++|+
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~C~--~~~~y~~~~Ss----------- 69 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHK-GCDNSEGCV--GKRFFDPSSSS----------- 69 (361)
T ss_dssp -CCEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCGGGTCC--SSCCBCGGGCT-----------
T ss_pred CCccceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCC-CCCCCccCC--CCCcCCCccCC-----------
Confidence 4677788998 79999999999999999999999999999999 898 776 57899999983
Q ss_pred CCCCCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCC----CCCCCCCcceEEeeC
Q 017049 78 HWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNP----GPLSPPDTAGVLGLG 153 (378)
Q Consensus 78 ~~~~t~~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~----~~~~~~~~~GilGLg 153 (378)
|++. ..|.|.+.|++| .+.|.+++|+|+| |++.++++.|||++..... ..+.....+||||||
T Consensus 70 ----T~~~----~~~~~~i~Yg~G-s~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg 136 (361)
T 1mpp_A 70 ----TFKE----TDYNLNITYGTG-GANGIYFRDSITV----GGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAA 136 (361)
T ss_dssp ----TCEE----EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECS
T ss_pred ----ceEe----cCCeEEEEECCc-eEEEEEEEEEEEE----CCEEEeceEEEEEEeccCccccccccccCCCCCEEEeC
Confidence 6553 678999999999 5899999999999 8888999999999987430 122235689999999
Q ss_pred CC------------CChHHHHHhhcCCc-cCeEEEEeCCC-CceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeee
Q 017049 154 RG------------RISIVSQLREYGLI-RNVIGHCIGQN-GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPA 217 (378)
Q Consensus 154 ~~------------~~s~~~~l~~~~~i-~~~fsl~l~~~-~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~ 217 (378)
++ ..+++++|+++|+| +++||+||.+. ..|.|+|| |++++.|++.|+|+........+|.|.|+
T Consensus 137 ~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~ 216 (361)
T 1mpp_A 137 YPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVT 216 (361)
T ss_dssp CGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEE
T ss_pred CcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEe
Confidence 85 45688999999999 99999999874 58999999 78899999999999887321129999999
Q ss_pred EEEeCCEEec-cCCCcEE-EecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCcccccccc-cc
Q 017049 218 ELLYSGKSCG-LKDLTLI-FDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYF-KP 294 (378)
Q Consensus 218 ~i~v~~~~~~-~~~~~~i-iDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~-P~ 294 (378)
+|+|+++.+. .....++ |||||++++||.+++++|.+++.+... .. ...|..+|... ..+ |+
T Consensus 217 ~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~------~g~~~~~C~~~----~~~~p~ 281 (361)
T 1mpp_A 217 GVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT-----ES------QQGYTVPCSKY----QDSKTT 281 (361)
T ss_dssp EEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE-----EE------TTEEEEEHHHH----TTCCCE
T ss_pred EEEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc-----CC------CCcEEEECCCc----ccCCCc
Confidence 9999998874 2457899 999999999999999999999976432 00 01233334322 246 99
Q ss_pred EEEEE--cC-CCcceEEEeCCCceEEEeCC-ccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCCCCc
Q 017049 295 LALSF--TN-RRNSVRLVVPPEAYLVISGR-KNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNT 370 (378)
Q Consensus 295 l~~~f--~~-~~~~~~~~l~~~~~~~~~~~-~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~c~~ 370 (378)
|+|+| ++ +.++..+.|++++|+++... +..|+..+... ..+.||||++|||++|+|||++++|||||+++|+.
T Consensus 282 i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~---~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~ 358 (361)
T 1mpp_A 282 FSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPD---GGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGY 358 (361)
T ss_dssp EEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEE---SSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTT
T ss_pred EEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeC---CCCCEEEChHHhccEEEEEECCCCEEEEEEcccCC
Confidence 99999 51 11258999999999997653 46897444322 24589999999999999999999999999999997
Q ss_pred cc
Q 017049 371 LL 372 (378)
Q Consensus 371 ~~ 372 (378)
+.
T Consensus 359 ~~ 360 (361)
T 1mpp_A 359 EN 360 (361)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 10
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=3.2e-56 Score=417.28 Aligned_cols=304 Identities=20% Similarity=0.396 Sum_probs=252.1
Q ss_pred eeeeec----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCC--CCCCCCCCCCCCCCCcccCCchhccCCCCCCC
Q 017049 9 FFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT--GCTKPPEKQYKPHKNIVPCSNPRCAALHWPNP 82 (378)
Q Consensus 9 ~~~pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~--~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t 82 (378)
+.+||. ..|+++|.||||||+++|+|||||+++||+|. +|. .|. .++.|+|++|+ |
T Consensus 2 ~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~--~~~~y~~~~Ss---------------T 63 (324)
T 1am5_A 2 VTEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSS-HCSAQACS--NHNKFKPRQSS---------------T 63 (324)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBT-TCCSHHHH--TSCCBCGGGCT---------------T
T ss_pred ceeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccc--CCCcCCCccCC---------------C
Confidence 346777 89999999999999999999999999999998 887 454 56899999983 6
Q ss_pred CCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCC------
Q 017049 83 PRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------ 156 (378)
Q Consensus 83 ~~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~------ 156 (378)
++. .+|.|++.|++| .+.|.+++|+|+| |++.++++.|||+....+. .+.....+||||||++.
T Consensus 64 ~~~----~~~~~~i~Yg~G-s~~G~~~~D~v~~----g~~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~ 133 (324)
T 1am5_A 64 YVE----TGKTVDLTYGTG-GMRGILGQDTVSV----GGGSDPNQELGESQTEPGP-FQAAAPFDGILGLAYPSIAAAGA 133 (324)
T ss_dssp CEE----EEEEEEEECSSC-EEEEEEEEEEEES----SSSCEEEEEEEEEEECCST-TTTTCSSSEEEECSCGGGCGGGC
T ss_pred eEe----CCcEEEEEECCC-CeEEEEEECceeE----CCcEEcccEEEEEEecccc-cccCCCCceEEecCCccccccCC
Confidence 553 678999999999 6799999999999 8888899999999987332 22235789999999954
Q ss_pred ChHHHHHhhcCCc-cCeEEEEeCCC--CceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEeccCCC
Q 017049 157 ISIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDL 231 (378)
Q Consensus 157 ~s~~~~l~~~~~i-~~~fsl~l~~~--~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~ 231 (378)
.+++++|++++++ +++||+||.+. ..|.|+|| |++++.|++.|+|+... .+|.|.+++|+|+++.+.....
T Consensus 134 ~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~ 209 (324)
T 1am5_A 134 VPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAE----KYWQVALDGITVNGQTAACEGC 209 (324)
T ss_dssp CCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEE----TTEEEEECEEEETTEECCCCCE
T ss_pred CchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCC----cEEEEEEeEEEECCceeeccCc
Confidence 3689999999999 99999999864 48999999 78899999999999875 8999999999999988644348
Q ss_pred cEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcceEEEeC
Q 017049 232 TLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVP 311 (378)
Q Consensus 232 ~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~l~ 311 (378)
.++|||||++++||.+++++|.+++++. .. .. .|..+|... ..+|+|+|+|++ ..+.|+
T Consensus 210 ~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~~--------~g----~~~~~C~~~----~~~P~i~f~f~g----~~~~i~ 268 (324)
T 1am5_A 210 QAIVDTGTSKIVAPVSALANIMKDIGAS-EN--------QG----EMMGNCASV----QSLPDITFTING----VKQPLP 268 (324)
T ss_dssp EEEECTTCSSEEECTTTHHHHHHHHTCE-EC--------CC----CEECCTTSS----SSSCCEEEEETT----EEEEEC
T ss_pred eEEEecCCccEECCHHHHHHHHHHhCCc-cc--------CC----cEEEeCCCc----ccCCcEEEEECC----EEEEEC
Confidence 8999999999999999999999999764 20 00 123344332 257999999964 899999
Q ss_pred CCceEEEeCCccEEEEEEcCCCC--CCCCceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 312 PEAYLVISGRKNVCLGILNGSEA--EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 312 ~~~~~~~~~~~~~C~~~~~~~~~--~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
+++|+++. +..|+..+...+. +..+.||||++|||++|+|||++++|||||+++
T Consensus 269 ~~~y~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 269 PSAYIEGD--QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp HHHHEEES--SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred HHHhcccC--CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 99999975 5679854433221 124689999999999999999999999999975
No 11
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=3.2e-57 Score=431.35 Aligned_cols=306 Identities=16% Similarity=0.296 Sum_probs=251.4
Q ss_pred eeeeeec----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCC----CCCCCCCCCCCCCCCcccCCchhccCCCC
Q 017049 8 FFFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT----GCTKPPEKQYKPHKNIVPCSNPRCAALHW 79 (378)
Q Consensus 8 ~~~~pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~----~c~~~~~~~y~~~~S~v~c~~~~C~~~~~ 79 (378)
....||. ..|+++|.||||||+|+|+|||||+++||+|. .|. .|. .+..|+|++|+
T Consensus 50 ~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~-~C~~~~~~C~--~~~~y~~~~Ss------------- 113 (383)
T 2x0b_A 50 TSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACV--YHKLFDASDSS------------- 113 (383)
T ss_dssp -CEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTSHHHH--TSCCBCGGGCT-------------
T ss_pred cceEeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEecc-CCCCCccccc--CCCCCCCCCCC-------------
Confidence 3447777 89999999999999999999999999999999 885 576 56899999993
Q ss_pred CCCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCCC--
Q 017049 80 PNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRI-- 157 (378)
Q Consensus 80 ~~t~~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~~-- 157 (378)
|++. ++|.|.+.|++| .+.|.+++|+|+| |++.++ +.||++....+. .+....++||||||++..
T Consensus 114 --T~~~----~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~-~~Fg~a~~~~g~-~f~~~~~dGIlGLg~~~~s~ 180 (383)
T 2x0b_A 114 --SYKH----NGTELTLRYSTG-TVSGFLSQDIITV----GGITVT-QMFGEVTEMPAL-PFMLAEFDGVVGMGFIEQAI 180 (383)
T ss_dssp --TCEE----EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEE-EEEEEEEECCHH-HHTTCSSSEEEECSCGGGCG
T ss_pred --cEEE----CCcEEEEEcCCc-cEEEEEEeeEEEE----cCceEE-EEEEEEEecCCc-ccccCCCceEeccCCCcccc
Confidence 6664 778999999999 6999999999999 888888 999999886321 122357899999999653
Q ss_pred ----hHHHHHhhcCCc-cCeEEEEeCCC------CceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCE
Q 017049 158 ----SIVSQLREYGLI-RNVIGHCIGQN------GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGK 224 (378)
Q Consensus 158 ----s~~~~l~~~~~i-~~~fsl~l~~~------~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~ 224 (378)
+++++|+++|++ +++||+||.+. ..|.|+|| |++++.|++.|+|+... .+|+|.|++|.|+++
T Consensus 181 ~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~----~~w~v~l~~i~v~~~ 256 (383)
T 2x0b_A 181 GRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT----GVWQIQMKGVSVGSS 256 (383)
T ss_dssp GGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST----TSCEEEECEEEESSC
T ss_pred CCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC----ceEEEEEeEEEeCCc
Confidence 589999999999 99999999854 28999999 78889999999999875 899999999999998
Q ss_pred Ee-ccCCCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCC
Q 017049 225 SC-GLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRR 303 (378)
Q Consensus 225 ~~-~~~~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~ 303 (378)
.+ ...+..+|+||||+++++|.+++++|.+++++... .. -|..+|... ..+|+|+|+|++
T Consensus 257 ~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~--------~g-----~~~v~C~~~----~~~P~i~f~~~g-- 317 (383)
T 2x0b_A 257 TLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKKR--------LF-----DYVVKCNEG----PTLPDISFHLGG-- 317 (383)
T ss_dssp CCBSTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC--------SS-----CEEEEGGGT----TTCCCEEEEETT--
T ss_pred eEEcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCccc--------CC-----cEEEecccc----ccCceEEEEECC--
Confidence 74 34568899999999999999999999999975421 00 022234322 257999999974
Q ss_pred cceEEEeCCCceEEEeCC--ccEEEEEEcCCCC--CCCCceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 304 NSVRLVVPPEAYLVISGR--KNVCLGILNGSEA--EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 304 ~~~~~~l~~~~~~~~~~~--~~~C~~~~~~~~~--~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
..|.|++++|+++... +..|+..+...+. +..+.||||++|||++|+|||++++|||||+++
T Consensus 318 --~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 318 --KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp --EEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --EEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 8999999999986543 4589854432221 135689999999999999999999999999974
No 12
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.1e-56 Score=419.39 Aligned_cols=306 Identities=19% Similarity=0.320 Sum_probs=253.7
Q ss_pred eeeec----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCCCCCC
Q 017049 10 FFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRC 85 (378)
Q Consensus 10 ~~pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t~~~ 85 (378)
.+||. ..|+++|.||||||+++|+|||||+++||+|. +|..|.+..++.|+|++|+ |++.
T Consensus 4 ~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~y~~~~Ss---------------T~~~ 67 (329)
T 1dpj_A 4 DVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSN-ECGSLACFLHSKYDHEASS---------------SYKA 67 (329)
T ss_dssp EEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGCT---------------TCEE
T ss_pred ceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecC-CCCCcccCCcCcCCcccCc---------------CeEE
Confidence 45666 78999999999999999999999999999999 8987333356889999983 6553
Q ss_pred CCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCCC------hH
Q 017049 86 KHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRI------SI 159 (378)
Q Consensus 86 ~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~~------s~ 159 (378)
+.|.|.+.|++| .+.|.+++|+|+| |++.++++.|||++...+. .+.....+||||||++.. ++
T Consensus 68 ----~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~-~f~~~~~~GilGLg~~~~s~~~~~~~ 137 (329)
T 1dpj_A 68 ----NGTEFAIQYGTG-SLEGYISQDTLSI----GDLTIPKQDFAEATSEPGL-TFAFGKFDGILGLGYDTISVDKVVPP 137 (329)
T ss_dssp ----EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCHH-HHTTCSCSEEEECSCGGGCGGGCCCH
T ss_pred ----CCcEEEEEECCc-eEEEEEEEEEEEE----CCeEECCeEEEEEEecCcc-ccccCCcceEEEeCCchhhccCCCCH
Confidence 678999999999 8999999999999 8888999999999886321 111246899999999653 57
Q ss_pred HHHHhhcCCc-cCeEEEEeCCC-----CceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEeccCCC
Q 017049 160 VSQLREYGLI-RNVIGHCIGQN-----GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDL 231 (378)
Q Consensus 160 ~~~l~~~~~i-~~~fsl~l~~~-----~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~ 231 (378)
+++|+++|++ +++||+||.+. ..|.|+|| |++++.|++.|+|+... .+|.|.+++|+|+++.+...+.
T Consensus 138 ~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~ 213 (329)
T 1dpj_A 138 FYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRK----AYWEVKFEGIGLGDEYAELESH 213 (329)
T ss_dssp HHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSB----TTBEEEEEEEEETTEEEECSSC
T ss_pred HHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCC----ceEEEEeeeEEECCeEecCCCc
Confidence 8999999999 99999999743 37999999 77889999999999875 8999999999999998877788
Q ss_pred cEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcceEEEeC
Q 017049 232 TLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVP 311 (378)
Q Consensus 232 ~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~l~ 311 (378)
.++|||||++++||.+++++|.+++++... ...||..+|... ..+|+|+|+|++ ..+.|+
T Consensus 214 ~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~------------~~g~~~~~C~~~----~~~P~i~f~f~g----~~~~i~ 273 (329)
T 1dpj_A 214 GAAIDTGTSLITLPSGLAEMINAEIGAKKG------------WTGQYTLDCNTR----DNLPDLIFNFNG----YNFTIG 273 (329)
T ss_dssp EEEECTTCSCEEECHHHHHHHHHHHTCEEC------------TTSSEEECGGGG----GGCCCEEEEETT----EEEEEC
T ss_pred cEEeeCCCCcEECCHHHHHHHHHHhCCccC------------CCCeEEEECCCC----CcCCcEEEEECC----EEEEEC
Confidence 999999999999999999999999865311 112455556542 357999999975 899999
Q ss_pred CCceEEEeCCccEEEEEEcCCC--CCCCCceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 312 PEAYLVISGRKNVCLGILNGSE--AEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 312 ~~~~~~~~~~~~~C~~~~~~~~--~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
+++|+++.. ..|+..+...+ .+..+.||||++|||++|+|||++++|||||+++
T Consensus 274 ~~~y~~~~~--~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 274 PYDYTLEVS--GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp TTTSEEEET--TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHHhEecCC--CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 999999753 57985443221 1234689999999999999999999999999975
No 13
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=7.8e-57 Score=420.93 Aligned_cols=303 Identities=20% Similarity=0.327 Sum_probs=250.4
Q ss_pred eeec----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCCCCCCC
Q 017049 11 FPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCK 86 (378)
Q Consensus 11 ~pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t~~~~ 86 (378)
.||. ..|+++|.||||||+++|++||||+++||+|. +|..|.+..+..|+|++|+ |++.
T Consensus 3 ~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~-~C~~~~C~~~~~y~~~~Ss---------------T~~~- 65 (320)
T 4aa9_A 3 EPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSI-YCKSNVCKNHHRFDPRKSS---------------TFRN- 65 (320)
T ss_dssp -----CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGCT---------------TCEE-
T ss_pred ccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCC-CCCccccCCCCCCCCCCCc---------------CeEc-
Confidence 4566 78999999999999999999999999999999 8975444467899999993 6664
Q ss_pred CCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCC------ChHH
Q 017049 87 HPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------ISIV 160 (378)
Q Consensus 87 ~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~------~s~~ 160 (378)
..|.|.+.|++| .+.|.+++|+|+| |+..++++.|||+...... .+.....+||||||++. .+++
T Consensus 66 ---~~~~~~i~Yg~g-s~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~~ 136 (320)
T 4aa9_A 66 ---LGKPLSIHYGTG-SMEGFLGYDTVTV----SNIVDPNQTVGLSTEQPGE-VFTYSEFDGILGLAYPSLASEYSVPVF 136 (320)
T ss_dssp ---EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCSH-HHHSCCCSEEEECSCGGGSCTTCCCHH
T ss_pred ---CCcEEEEEECCc-EEEEEEEEEEEEE----CCEeecCeEEEEEEEcccc-cccccCcccEEecCcccccccCCCCHH
Confidence 678999999999 6899999999999 8888999999999886321 11124579999999853 5699
Q ss_pred HHHhhcCCc-cCeEEEEeCCC-CceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEecc-CCCcEEE
Q 017049 161 SQLREYGLI-RNVIGHCIGQN-GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL-KDLTLIF 235 (378)
Q Consensus 161 ~~l~~~~~i-~~~fsl~l~~~-~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~-~~~~~ii 235 (378)
++|+++|+| +++||+||.+. ..|.|+|| |++++.|++.|+|+... .+|.|.+++|.++++.+.. .+..++|
T Consensus 137 ~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~w~v~l~~i~v~~~~~~~~~~~~~ii 212 (320)
T 4aa9_A 137 DNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTLQ----QYWQFTVDSVTINGVAVACVGGCQAIL 212 (320)
T ss_dssp HHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSSB----TTBEEEECEEEETTEEEESTTCEEEEE
T ss_pred HHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcccC----CceEEEEeEEEECCEEeccCCCcEEEE
Confidence 999999999 99999999974 78999999 88899999999999865 8999999999999988765 4578999
Q ss_pred ecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcceEEEeCCCce
Q 017049 236 DSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAY 315 (378)
Q Consensus 236 DSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~l~~~~~ 315 (378)
||||++++||.+++++|.+++++.... ...|..+|... ..+|+|+|+|++ ..+.|++++|
T Consensus 213 DsGtt~~~lP~~~~~~i~~~~~~~~~~------------~g~~~~~C~~~----~~~p~i~f~f~g----~~~~l~~~~y 272 (320)
T 4aa9_A 213 DTGTSVLFGPSSDILKIQMAIGATENR------------YGEFDVNCGNL----RSMPTVVFEING----RDYPLSPSAY 272 (320)
T ss_dssp CTTCSSEEEEHHHHHHHHHHTTCEECT------------TSCEEECGGGG----GGCCCEEEEETT----EEEEECHHHH
T ss_pred ECCCCcEECCHHHHHHHHHHhCCcccC------------CCcEEEeCCCC----CcCceEEEEECC----EEEEECHHHh
Confidence 999999999999999999999654320 01244445433 357999999975 8999999999
Q ss_pred EEEeCCccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 316 LVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 316 ~~~~~~~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
+.+ .+..|+..+.... ..+.||||++|||++|+|||++++|||||+++
T Consensus 273 ~~~--~~~~C~~~i~~~~--~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 273 TSK--DQGFCTSGFQGDN--NSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp EEE--ETTEEEESEEEET--TCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccC--CCCeEEEEEEcCC--CCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 975 4567986443321 24579999999999999999999999999975
No 14
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=3.1e-56 Score=418.07 Aligned_cols=310 Identities=18% Similarity=0.279 Sum_probs=252.9
Q ss_pred eeeeee-eec--ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCCC
Q 017049 6 IEFFFF-PIF--SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNP 82 (378)
Q Consensus 6 ~~~~~~-pl~--~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t 82 (378)
++.... |.. ..|+++|.||||||+++|+|||||+++||+|. +|..|.++.++.|+|++|+ |
T Consensus 3 ~~v~~~~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~~~~~y~~~~Ss---------------T 66 (329)
T 3c9x_A 3 GSAPNHPSDSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSS-ETPKSSATGHAIYTPSKSS---------------T 66 (329)
T ss_dssp EEEEEEESSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCGGGCT---------------T
T ss_pred cceeeecCCCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecC-CCCccccCCCCcCCcccCc---------------C
Confidence 344555 555 89999999999999999999999999999999 8988877788999999983 6
Q ss_pred CCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCC------
Q 017049 83 PRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------ 156 (378)
Q Consensus 83 ~~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~------ 156 (378)
++.. +.|.|.+.|++|+.+.|.+++|+|+| |++.++++.|||++...+.. ......+||||||+..
T Consensus 67 ~~~~---~~~~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~~ 138 (329)
T 3c9x_A 67 SKKV---SGASWSISYGDGSSSSGDVYTDKVTI----GGFSVNTQGVESATRVSTEF-VQDTVISGLVGLAFDSGNQVRP 138 (329)
T ss_dssp CEEC---TTCBEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHH-HHCTTCCEEEECSCGGGCCCBS
T ss_pred ceEc---CCCeEEEEeCCCCcEEEEEEEEEEEE----CCEEEcceEEEEEEecCccc-cccCCCceeEEeCcccccccCC
Confidence 5532 56799999999977999999999999 88889999999999763211 0113679999999943
Q ss_pred ---ChHHHHHhhcCCc-cCeEEEEeCCCCceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEeccCC
Q 017049 157 ---ISIVSQLREYGLI-RNVIGHCIGQNGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKD 230 (378)
Q Consensus 157 ---~s~~~~l~~~~~i-~~~fsl~l~~~~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~ 230 (378)
.+++++|+++ + +++||+||.++..|.|+|| |++++.|++.|+|+... ..+|.|.+++|+|+++.+...+
T Consensus 139 ~~~~~~~~~l~~~--i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~~~~ 213 (329)
T 3c9x_A 139 HPQKTWFSNAASS--LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDNS---QGFWEFTASGYSVGGGKLNRNS 213 (329)
T ss_dssp SCCCCHHHHHHTT--SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBCT---TSSCEEEECCEEETTCCCCSCC
T ss_pred CCCCCHHHHHHHh--cCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccCC---CceEEEEEeeEEECCEeccCCC
Confidence 3589999986 7 9999999998789999999 78899999999999854 3799999999999998876667
Q ss_pred CcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcceEEEe
Q 017049 231 LTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVV 310 (378)
Q Consensus 231 ~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~l 310 (378)
..++|||||++++||.+++++|.+++...... . ... -|..+|. ..+|+|+|+|++ ..+.|
T Consensus 214 ~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~~----~--~~~----~~~~~C~------~~~P~i~f~f~g----~~~~i 273 (329)
T 3c9x_A 214 IDGIADTGTTLLLLDDNVVDAYYANVQSAQYD----N--QQE----GVVFDCD------EDLPSFSFGVGS----STITI 273 (329)
T ss_dssp EEEEECTTCCSEEECHHHHHHHHTTCTTCEEE----T--TTT----EEEEETT------CCCCCEEEEETT----EEEEE
T ss_pred ceEEEECCCCcEeCCHHHHHHHHHhCCCcEEc----C--CCC----EEEEECC------CCCCcEEEEECC----EEEEE
Confidence 89999999999999999999999887432210 0 000 1222343 257999999974 89999
Q ss_pred CCCceEEEeCC--ccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecC
Q 017049 311 PPEAYLVISGR--KNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPE 366 (378)
Q Consensus 311 ~~~~~~~~~~~--~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~ 366 (378)
|+++|++...+ ...|+..+...+ ..+.||||++|||++|+|||++++|||||++
T Consensus 274 p~~~~~~~~~~~~~~~C~~~i~~~~--~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 274 PGDLLNLTPLEEGSSTCFGGLQSSS--GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp CGGGGEEEESSTTCSEEEESEEECT--TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CHHHeeeeccCCCCCeEEEEEEcCC--CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 99999986533 368987554332 2468999999999999999999999999984
No 15
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=2.4e-56 Score=417.85 Aligned_cols=305 Identities=20% Similarity=0.333 Sum_probs=250.7
Q ss_pred eeeeeeec----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCC--CCCCCCCCCCCCCCCCcccCCchhccCCCCC
Q 017049 7 EFFFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPC--TGCTKPPEKQYKPHKNIVPCSNPRCAALHWP 80 (378)
Q Consensus 7 ~~~~~pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c--~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~ 80 (378)
+....||. ..|+++|.||||||+++|+|||||+++||+|. +| ..|. .++.|+|++|+
T Consensus 2 ~~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~--~~~~y~~~~Ss-------------- 64 (323)
T 3cms_A 2 EVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSI-YCKSNACK--NHQRFDPRKSS-------------- 64 (323)
T ss_dssp CCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT--------------
T ss_pred CcceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCC-CCCccccc--CCCCCCCccCC--------------
Confidence 34456777 79999999999999999999999999999999 88 4565 56899999983
Q ss_pred CCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCC----
Q 017049 81 NPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR---- 156 (378)
Q Consensus 81 ~t~~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~---- 156 (378)
|++. ..|.|.+.|++| .+.|.+++|+|+| |+..++++.|||+....+. .+.....+||||||++.
T Consensus 65 -T~~~----~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~ 133 (323)
T 3cms_A 65 -TFQN----LGKPLSIHYGTG-SMQGILGYDTVTV----SNIVDIQQTVGLSTQEPGD-FFTYAEFDGILGMAYPSLASE 133 (323)
T ss_dssp -TCEE----EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCSH-HHHHSSCSEEEECSCGGGSCT
T ss_pred -CeEE----CCcEEEEEeCCC-CeEEEEEEEEEEE----CCeEEeccEEEEEEecccc-cccccCCceEEecCcchhhcc
Confidence 6553 678999999999 6899999999999 8888999999999886321 11123579999999954
Q ss_pred --ChHHHHHhhcCCc-cCeEEEEeCCC-CceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEecc-C
Q 017049 157 --ISIVSQLREYGLI-RNVIGHCIGQN-GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL-K 229 (378)
Q Consensus 157 --~s~~~~l~~~~~i-~~~fsl~l~~~-~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~-~ 229 (378)
.+++++|++++.+ +++||+||.+. ..|.|+|| |++++.|++.|+|+... .+|.|.+++|+|+++.+.. .
T Consensus 134 ~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~ 209 (323)
T 3cms_A 134 YSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTVQ----QYWQFTVDSVTISGVVVACEG 209 (323)
T ss_dssp TCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSSB----TTBEEEEEEEEETTEEEESTT
T ss_pred CCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECccC----CeEEEEEeeEEECCEEeecCC
Confidence 4689999999999 99999999854 45999999 77889999999999875 8999999999999988753 4
Q ss_pred CCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcceEEE
Q 017049 230 DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLV 309 (378)
Q Consensus 230 ~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~ 309 (378)
+..++|||||++++||.+++++|.+++++.... ...|..+|... ..+|+|+|+|++ ..+.
T Consensus 210 ~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~------------~g~~~~~C~~~----~~~P~i~f~f~g----~~~~ 269 (323)
T 3cms_A 210 GCQAILDTGTSKLVGPSSDILNIQQAIGATQNQ------------YGEFDIDCDNL----SYMPTVVFEING----KMYP 269 (323)
T ss_dssp CEEEEECTTCCSEEECHHHHHHHHHHHTCEEET------------TTEEEECTTCT----TTSCCEEEEETT----EEEE
T ss_pred CcEEEEecCCccEeCCHHHHHHHHHHhCCeecC------------CCcEEEECCCC----ccCceEEEEECC----EEEE
Confidence 678999999999999999999999999654220 01233344432 257999999964 8999
Q ss_pred eCCCceEEEeCCccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 310 VPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 310 l~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
|++++|+++ .+..|+..+...+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 270 i~~~~y~~~--~~~~C~~~i~~~~--~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 270 LTPSAYTSQ--DQGFCTSGFQSEN--HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp ECHHHHEEE--ETTEEEESEEEC-----CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ECHHHhccC--CCCEEEEEEEeCC--CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 999999997 4567986443332 24689999999999999999999999999975
No 16
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=2.5e-56 Score=418.89 Aligned_cols=299 Identities=20% Similarity=0.397 Sum_probs=247.1
Q ss_pred ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCC--CCCCCCCCCCCCCCcccCCchhccCCCCCCCCCCCCCCCCC
Q 017049 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTG--CTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQC 92 (378)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~--c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t~~~~~~~~~~ 92 (378)
..|+++|.||||||+++|+|||||+++||+|. +|.. |. .++.|+|++|+ |++. .+|
T Consensus 12 ~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss---------------T~~~----~~~ 69 (329)
T 1htr_B 12 AAYFGEISIGTPPQNFLVLFDTGSSNLWVPSV-YCQSQACT--SHSRFNPSESS---------------TYST----NGQ 69 (329)
T ss_dssp CCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT---------------TCEE----EEE
T ss_pred CEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCCcccC--CCCcCCCccCC---------------CeEE----CCc
Confidence 89999999999999999999999999999999 8874 64 56899999983 6553 678
Q ss_pred eeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCC------ChHHHHHhhc
Q 017049 93 DYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------ISIVSQLREY 166 (378)
Q Consensus 93 ~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~------~s~~~~l~~~ 166 (378)
.|++.|++| .+.|.+++|+|+| |++.++++.|||+....+. .+.....+||||||++. .+++++|+++
T Consensus 70 ~~~i~Yg~g-s~~G~~~~D~v~~----g~~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q 143 (329)
T 1htr_B 70 TFSLQYGSG-SLTGFFGYDTLTV----QSIQVPNQEFGLSENEPGT-NFVYAQFDGIMGLAYPALSVDEATTAMQGMVQE 143 (329)
T ss_dssp EEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEESSCSSG-GGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHT
T ss_pred EEEEEeCCC-CeEEEEEeeeEEE----cceEECceEEEEEEEcccc-ccccCCCceEEecCCCcccccCCCCHHHHHHhc
Confidence 999999999 6799999999999 8888999999999876321 12224689999999965 3689999999
Q ss_pred CCc-cCeEEEEeCCCC---ceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEec--cCCCcEEEecC
Q 017049 167 GLI-RNVIGHCIGQNG---RGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCG--LKDLTLIFDSG 238 (378)
Q Consensus 167 ~~i-~~~fsl~l~~~~---~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~--~~~~~~iiDSG 238 (378)
+++ +++||+||.+.. .|.|+|| |++++.|++.|+|+... .+|.|.+++|+|+++.+. ..+..++||||
T Consensus 144 g~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSG 219 (329)
T 1htr_B 144 GALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQE----LYWQIGIEEFLIGGQASGWCSEGCQAIVDTG 219 (329)
T ss_dssp TCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSS----SSCEEEECEEEETTEECCTTTTCEEEEECTT
T ss_pred CCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCC----ceEEEEEeEEEECCceeeecCCCceEEEecC
Confidence 999 999999998653 8999999 77889999999999865 899999999999998864 34678999999
Q ss_pred CcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcceEEEeCCCceEEE
Q 017049 239 ASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVI 318 (378)
Q Consensus 239 t~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~l~~~~~~~~ 318 (378)
|++++||.+++++|.+++++.... .. -|..+|... ..+|+|+|+|++ .++.|++++|+++
T Consensus 220 Tt~~~lp~~~~~~l~~~~~~~~~~--------~g----~~~~~C~~~----~~~P~i~f~f~g----~~~~i~~~~y~~~ 279 (329)
T 1htr_B 220 TSLLTVPQQYMSALLQATGAQEDE--------YG----QFLVNCNSI----QNLPSLTFIING----VEFPLPPSSYILS 279 (329)
T ss_dssp CCSEEEEGGGHHHHHHHHTCEECT--------TS----CEEECGGGG----GGSCCEEEEETT----EEEEECHHHHEEE
T ss_pred CccEECCHHHHHHHHHHhCCeecC--------CC----eEEEeCCCc----ccCCcEEEEECC----EEEEECHHHhccc
Confidence 999999999999999999764320 00 122334332 257999999964 8999999999987
Q ss_pred eCCccEEEEEEcCCC--CCCCC-ceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 319 SGRKNVCLGILNGSE--AEVGE-NNIIGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 319 ~~~~~~C~~~~~~~~--~~~~~-~~iLG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
.. + .|+..+...+ .+..+ .||||++|||++|+|||++++|||||+++
T Consensus 280 ~~-g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 280 NN-G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp CS-S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CC-C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 65 4 7985443221 11234 89999999999999999999999999974
No 17
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=3.5e-56 Score=417.66 Aligned_cols=309 Identities=17% Similarity=0.268 Sum_probs=250.8
Q ss_pred eeeeee-eec--ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCCC
Q 017049 6 IEFFFF-PIF--SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNP 82 (378)
Q Consensus 6 ~~~~~~-pl~--~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t 82 (378)
++...- |+. ..|+++|.||||||+++|+|||||+++||+|. +|..|.+ .++.|+|++|+ |
T Consensus 3 ~~v~~~~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~-~~~~y~~~~Ss---------------T 65 (329)
T 1oew_A 3 GSATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSS-ETTASEV-XQTIYTPSKST---------------T 65 (329)
T ss_dssp EEEEEEESSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCGGGC--CCCBCGGGCT---------------T
T ss_pred ceeEeeecCCCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecC-CCCcccc-ccCccCCccCc---------------c
Confidence 455556 666 89999999999999999999999999999999 9998877 77899999983 5
Q ss_pred CCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCC------
Q 017049 83 PRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------ 156 (378)
Q Consensus 83 ~~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~------ 156 (378)
++.. +.|.|.+.|++|+.+.|.+++|+|+| |++.++++.|||++...+.. ......+||||||++.
T Consensus 66 ~~~~---~~~~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~~ 137 (329)
T 1oew_A 66 AKLL---SGATWSISYGDGSSSSGDVYTDTVSV----GGLTVTGQAVESAKKVSSSF-TEDSTIDGLLGLAFSTLNTVSP 137 (329)
T ss_dssp CEEE---EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHH-HHCTTCCEEEECSCGGGCCCBS
T ss_pred ceec---CCCeEEEEeCCCCcEEEEEEEEEEEE----CCEEEeeeEEEEEEecCccc-cccCCCceEEEeccccccccCc
Confidence 5531 46799999999976999999999999 88889999999999863211 1113579999999953
Q ss_pred ---ChHHHHHhhcCCc-cCeEEEEeCCCCceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEeccCC
Q 017049 157 ---ISIVSQLREYGLI-RNVIGHCIGQNGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKD 230 (378)
Q Consensus 157 ---~s~~~~l~~~~~i-~~~fsl~l~~~~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~ 230 (378)
.+++++|+++ + +++||+||.++..|.|+|| |++++.|++.|+|+... ..+|.|.+++|+|+++.+...+
T Consensus 138 ~~~~~~~~~l~~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~~~~ 212 (329)
T 1oew_A 138 TQQKTFFDNAKAS--LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTK---QGFWEWTSTGYAVGSGTFKSTS 212 (329)
T ss_dssp SCCCCHHHHHTTT--SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCT---TSSCEEEEEEEEETTSCCEEEE
T ss_pred CCCCCHHHHHHHh--ccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCC---CceEEEEEeeEEECCeeccCCC
Confidence 3589999987 7 9999999998789999999 88899999999999854 3899999999999998775556
Q ss_pred CcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcceEEEe
Q 017049 231 LTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVV 310 (378)
Q Consensus 231 ~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~l 310 (378)
..++|||||++++||.+++++|.+++.+.... . .. .-|..+|. ..+|+|+|+|+ +.++.|
T Consensus 213 ~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~~----~--~~----g~~~~~C~------~~~P~i~f~fg----g~~~~i 272 (329)
T 1oew_A 213 IDGIADTGTTLLYLPATVVSAYWAQVSGAKSS----S--SV----GGYVFPCS------ATLPSFTFGVG----SARIVI 272 (329)
T ss_dssp EEEEECTTCCSEEECHHHHHHHHTTSTTCEEE----T--TT----TEEEEETT------CCCCCEEEEET----TEEEEE
T ss_pred ceEEEeCCCCCEECCHHHHHHHHHhCCCcEEc----C--CC----CEEEEECC------CCCCcEEEEEC----CEEEEE
Confidence 78999999999999999999999888432210 0 00 01223343 25799999994 489999
Q ss_pred CCCceEEEeCC--ccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeC-CCCEEeeecC
Q 017049 311 PPEAYLVISGR--KNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDN-EKQRIGWKPE 366 (378)
Q Consensus 311 ~~~~~~~~~~~--~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~-~~~rigfa~~ 366 (378)
|+++|++...+ ...|+..+...+ ..+.||||++|||++|+|||+ +++|||||++
T Consensus 273 p~~~~~~~~~~~~~~~C~~~i~~~~--~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 273 PGDYIDFGPISTGSSSCFGGIQSSA--GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp CHHHHEEEESSTTCSEEEESEEEST--TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred CHHHeeeeecCCCCCeEEEEEEeCC--CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 99999986532 468987554332 246899999999999999999 9999999984
No 18
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.8e-55 Score=412.11 Aligned_cols=309 Identities=16% Similarity=0.271 Sum_probs=253.1
Q ss_pred eceeeeeeeec--ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCC
Q 017049 4 SWIEFFFFPIF--SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPN 81 (378)
Q Consensus 4 ~~~~~~~~pl~--~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~ 81 (378)
|.++....|+. ..|+++|.|| ||+++|+|||||+++||+|. +|..|.++.++.|+|++|
T Consensus 1 ~~~~v~~~~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~S---------------- 61 (325)
T 1ibq_A 1 SKGSAVTTPQNNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSD-ELPSSEQTGHDLYTPSSS---------------- 61 (325)
T ss_dssp CCEEEEEEECTTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECT-TSCHHHHTTSCCCBCCSS----------------
T ss_pred CCceEEeEEcCCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeC-CCCccccCCCCCCCchhc----------------
Confidence 35677777877 8999999999 99999999999999999999 898887778899999998
Q ss_pred CCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCC-----
Q 017049 82 PPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR----- 156 (378)
Q Consensus 82 t~~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~----- 156 (378)
++.. +.|.|++.|++|+.+.|.+++|+|+| |++.++++.|||++...... ......+||||||++.
T Consensus 62 s~~~----~~~~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~ 132 (325)
T 1ibq_A 62 ATKL----SGYSWDISYGDGSSASGDVYRDTVTV----GGVTTNKQAVEAASKISSEF-VQDTANDGLLGLAFSSINTVQ 132 (325)
T ss_dssp CEEC----TTCBEEEECSSSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHH-HTSTTCCEEEECSCGGGCCCB
T ss_pred CCcc----CCCEEEEEeCCCCEEEEEEEEeEEEE----CCEEEcceEEEEEEecCccc-cccCCCceEEEeCcccccccC
Confidence 4221 67899999999977999999999999 88889999999999863211 1113679999999954
Q ss_pred ----ChHHHHHhhcCCc-cCeEEEEeCCCCceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEeccC
Q 017049 157 ----ISIVSQLREYGLI-RNVIGHCIGQNGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK 229 (378)
Q Consensus 157 ----~s~~~~l~~~~~i-~~~fsl~l~~~~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~ 229 (378)
.+++++|+++ + +++||+||.++..|.|+|| |++++.|++.|+|+... ..+|.|.+++|+|+++.+...
T Consensus 133 p~~~~~~~~~l~~~--i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~~~~~~~ 207 (325)
T 1ibq_A 133 PKAQTTFFDTVKSQ--LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSS---QGYWGFSTDGYSIGDGSSSSS 207 (325)
T ss_dssp SSCCCCHHHHHGGG--SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEECEEEETTSCCBSC
T ss_pred cCCCCCHHHHHHHh--cCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCCC---CceEEEEECcEEECCeeccCC
Confidence 3588999987 7 9999999998779999999 78899999999999854 389999999999999887666
Q ss_pred CCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcceEEE
Q 017049 230 DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLV 309 (378)
Q Consensus 230 ~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~ 309 (378)
+..++|||||++++||.+++++|.+++.+... ..- .. -|..+|. ..+|+|+|+|+ +..+.
T Consensus 208 ~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~----~~~--~g----~~~~~C~------~~~P~i~f~fg----g~~~~ 267 (325)
T 1ibq_A 208 GFSAIADTGTTLILLDDEIVSAYYEQVSGAQE----SYE--AG----GYVFSCS------TDLPDFTVVIG----DYKAV 267 (325)
T ss_dssp CEEEEECTTCCSEEECHHHHHHHHTTSTTCBC----CSS--SS----SCEEETT------CCCCCEEEEET----TEEEE
T ss_pred CceEEEeCCCCcEeCCHHHHHHHHHhCCCceE----cCc--CC----eEEEEcC------CCCCcEEEEEC----CEEEE
Confidence 78999999999999999999999998843211 000 00 0122333 25799999995 48999
Q ss_pred eCCCceEEEeCC-c-cEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 310 VPPEAYLVISGR-K-NVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 310 l~~~~~~~~~~~-~-~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
||+++|++...+ + ..|+..+...+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 268 i~~~~~~~~~~~~~~~~C~~~i~~~~--~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 268 VPGKYINYAPVSTGSSTCYGGIQSNS--GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp ECHHHHEEEESSTTCSEEEESEEECT--TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ECHHHhcccccCCCCCeEEEEEEcCC--CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 999999986533 3 68987554332 24689999999999999999999999999974
No 19
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.4e-54 Score=417.55 Aligned_cols=342 Identities=18% Similarity=0.356 Sum_probs=260.9
Q ss_pred eeeeeeec-----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCC-
Q 017049 7 EFFFFPIF-----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWP- 80 (378)
Q Consensus 7 ~~~~~pl~-----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~- 80 (378)
+.+.+||. ..|+++|.||||||++.|+|||||+++||+|. +| . ....|. .++|.++.|...+.+
T Consensus 8 ~~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~~---~--~Sst~~----~~~C~s~~C~~~~~~~ 77 (403)
T 3aup_A 8 NLVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE-QQ---Y--SSKTYQ----APFCHSTQCSRANTHQ 77 (403)
T ss_dssp CCEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SC---C--CCSSCB----CCCTTBHHHHHTTCCC
T ss_pred ccEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCC-CC---C--CCCCCC----ccCCCCccccCccccC
Confidence 56778988 68999999999999999999999999999988 54 2 122222 478999999875432
Q ss_pred -------CCCCCCCCCCCCeeEeEeC-CCCeEEEEEEEEEEEEeecCCc-------cccccEEEeeeeecCCCCCCCCCC
Q 017049 81 -------NPPRCKHPNDQCDYEIEYG-DGGSSIGALVTDLFPLRFSNGS-------VFNVPLTFGCGYNQHNPGPLSPPD 145 (378)
Q Consensus 81 -------~t~~~~~~~~~~~~~~~y~-~g~~~~G~~~~D~v~l~~~~g~-------~~~~~~~fg~~~~~~~~~~~~~~~ 145 (378)
+...|. ++.|.|.+.|+ +++.+.|.+++|+|+|++.+|. +.++++.|||+....... +....
T Consensus 78 c~~c~~~~~s~~~--~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~-~~~~~ 154 (403)
T 3aup_A 78 CLSCPAASRPGCH--KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQK-GLPRN 154 (403)
T ss_dssp EEECSSSCBTTBC--SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSS-SSSTT
T ss_pred ccccCCCCCCCCC--CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCccccccc-CCCCC
Confidence 112243 26789999998 7778999999999999654332 678899999998863220 11256
Q ss_pred cceEEeeCCCCChHHHHHhhcCCccCeEEEEeCC--CCceeEEeC-CCCCC--C-C-----CceeeeCccCCCCCcceEe
Q 017049 146 TAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQ--NGRGVLFLG-DGKVP--S-S-----GVAWTPMLQNSADLKHYIL 214 (378)
Q Consensus 146 ~~GilGLg~~~~s~~~~l~~~~~i~~~fsl~l~~--~~~G~l~fG-d~~~~--~-g-----~l~~~p~~~~~~~~~~w~v 214 (378)
.+||||||++..+++.||.+....+++||+||.+ ...|.|+|| |++++ . | ++.|+|+..... .+|.|
T Consensus 155 ~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGgd~~~~~~~~G~~~~~~l~~~Pl~~~~~--~~y~v 232 (403)
T 3aup_A 155 TQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQ--GEYNV 232 (403)
T ss_dssp CCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESCHHHHC--CTTCCTTTTEEEEECEECTT--SCEEE
T ss_pred CceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECCCchhccccccccccCceeecccccCCC--CcceE
Confidence 8999999999999999997544338999999986 468999999 65566 4 5 999999988642 69999
Q ss_pred eeeEEEeCCEEe-ccCC----------CcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCcc
Q 017049 215 GPAELLYSGKSC-GLKD----------LTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFK 283 (378)
Q Consensus 215 ~l~~i~v~~~~~-~~~~----------~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~ 283 (378)
.|++|+|+++.+ .... ..+||||||++++||++++++|.+++.+.+.. .........+..|+. |.
T Consensus 233 ~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~--~~~~~~~~~~~~c~~--c~ 308 (403)
T 3aup_A 233 RVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPK--QAQVKSVAPFGLCFN--SN 308 (403)
T ss_dssp CEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCG--GGEECCCTTCSCEEC--GG
T ss_pred EEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhcc--ccccCCCCCCCceEE--CC
Confidence 999999999888 5421 34999999999999999999999999776531 111111223456775 43
Q ss_pred CccccccccccEEEEEcCCCcceEEEeCCCceEEEeCCccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEee
Q 017049 284 ALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGW 363 (378)
Q Consensus 284 ~~~~~~~~~P~l~~~f~~~~~~~~~~l~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigf 363 (378)
... .+|.|+|+|+++. +..|.|++++|+++..++..|+++...... ..+.||||+.|||++|+|||++++||||
T Consensus 309 ~~~----~~P~i~f~f~g~~-~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~-~~~~~ILG~~fl~~~yvvfD~~~~rIGf 382 (403)
T 3aup_A 309 KIN----AYPSVDLVMDKPN-GPVWRISGEDLMVQAQPGVTCLGVMNGGMQ-PRAEITLGARQLEENLVVFDLARSRVGF 382 (403)
T ss_dssp GCC----CCCCEEEEESSTT-CCEEEECHHHHEEEC---CEEECEEECCSC-CSSSEEECHHHHTTSCEEEETTTTEEEE
T ss_pred CcC----cCCcEEEEEcCCC-ceEEEEcccceEEEcCCCeEEEEEEcCCCC-CCCcEEEChHHhcCeEEEEECCCCEEEE
Confidence 322 6899999998721 169999999999976556789977654421 2358999999999999999999999999
Q ss_pred -------ecCCCCcccc
Q 017049 364 -------KPEDCNTLLS 373 (378)
Q Consensus 364 -------a~~~c~~~~~ 373 (378)
++++|++...
T Consensus 383 ~A~~~~~~~~~C~~~~~ 399 (403)
T 3aup_A 383 STSSLHSHGVKCADLFN 399 (403)
T ss_dssp ESSCGGGGTCCGGGSCC
T ss_pred ecccccccCCCcccccc
Confidence 6778876544
No 20
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=8.2e-56 Score=417.66 Aligned_cols=307 Identities=16% Similarity=0.302 Sum_probs=254.7
Q ss_pred eeeeeeec----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCC----CCCCCCCCCCCCCCCcccCCchhccCCC
Q 017049 7 EFFFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT----GCTKPPEKQYKPHKNIVPCSNPRCAALH 78 (378)
Q Consensus 7 ~~~~~pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~----~c~~~~~~~y~~~~S~v~c~~~~C~~~~ 78 (378)
....+||. ..|+++|.||||||+++|++||||+++||+|. +|. .|. .+..|+|++|+
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~~C~--~~~~y~~~~Ss------------ 70 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACV--YHKLFDASDSS------------ 70 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTCHHHH--TSCCBCGGGCT------------
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccC-CCCCCCCccc--CCCCCCCCcCc------------
Confidence 34567887 78999999999999999999999999999999 887 454 67899999993
Q ss_pred CCCCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCCC-
Q 017049 79 WPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRI- 157 (378)
Q Consensus 79 ~~~t~~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~~- 157 (378)
|++. ..|.|.+.|++| .+.|.+++|+|+| |+..+ ++.|||+...... .+.....+||||||++..
T Consensus 71 ---T~~~----~~~~~~i~Yg~g-s~~G~~~~D~v~i----g~~~v-~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s 136 (341)
T 3k1w_A 71 ---SYKH----NGTELTLRYSTG-TVSGFLSQDIITV----GGITV-TQMFGEVTEMPAL-PFMLAEFDGVVGMGFIEQA 136 (341)
T ss_dssp ---TCEE----EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEE-EEEEEEEEECCHH-HHTTCSSSEEEECSCGGGC
T ss_pred ---CeeE----CCCEEEEEECCc-EEEEEEEEEEEEE----CCcee-eEEEEEEEEcccc-ccccCCcceEEECCchhhc
Confidence 6664 678999999999 5999999999999 88888 9999999987321 122356799999999653
Q ss_pred -----hHHHHHhhcCCc-cCeEEEEeCCCC------ceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCC
Q 017049 158 -----SIVSQLREYGLI-RNVIGHCIGQNG------RGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSG 223 (378)
Q Consensus 158 -----s~~~~l~~~~~i-~~~fsl~l~~~~------~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~ 223 (378)
+++++|+++|+| +++||+||.+.. .|.|+|| |++++.|++.|+|+... .+|.|.+++|.+++
T Consensus 137 ~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~w~v~l~~i~v~~ 212 (341)
T 3k1w_A 137 IGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT----GVWQIQMKGVSVGS 212 (341)
T ss_dssp GGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSST----TSCEEEECCEEETT
T ss_pred ccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCC----CEEEEEEeEEEECC
Confidence 589999999999 999999998654 8999999 88899999999999865 89999999999999
Q ss_pred EEec-cCCCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCC
Q 017049 224 KSCG-LKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNR 302 (378)
Q Consensus 224 ~~~~-~~~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~ 302 (378)
+.+. .....++|||||++++||.+++++|++++++... .. . |..+|... ..+|+|+|+|++
T Consensus 213 ~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~--------~~-g----~~~~C~~~----~~~p~i~f~f~g- 274 (341)
T 3k1w_A 213 STLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKKR--------LF-D----YVVKCNEG----PTLPDISFHLGG- 274 (341)
T ss_dssp EEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC--------SS-C----EEEEGGGG----GGCCCEEEEETT-
T ss_pred EEeecCCCCEEEEECCCChhcCCHHHHHHHHHHcCCeec--------CC-C----eEEeCCCC----CcCCcEEEEECC-
Confidence 8653 3567899999999999999999999999976432 01 1 44455432 357999999985
Q ss_pred CcceEEEeCCCceEEEeCC--ccEEEEEEcCCC--CCCCCceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 303 RNSVRLVVPPEAYLVISGR--KNVCLGILNGSE--AEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 303 ~~~~~~~l~~~~~~~~~~~--~~~C~~~~~~~~--~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
..+.|++++|+++... +..|+..+...+ ....+.||||++|||++|+|||++++|||||+++
T Consensus 275 ---~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 275 ---KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp ---EEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ---EEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 8999999999986432 568986544321 1234689999999999999999999999999986
No 21
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=3.3e-55 Score=409.86 Aligned_cols=306 Identities=17% Similarity=0.269 Sum_probs=250.4
Q ss_pred eeeeeeeec--ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCCCC
Q 017049 6 IEFFFFPIF--SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPP 83 (378)
Q Consensus 6 ~~~~~~pl~--~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t~ 83 (378)
++....|+. ..|+++|.|| ||+++|+|||||+++||+|. +|..|.++.++.|+|++| ++
T Consensus 4 ~~v~~~~~~~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~S----------------s~ 64 (323)
T 1izd_A 4 GSVTTNPTSNDEEYITQVTVG--DDTLGLDFDTGSADLWVFSS-QTPSSERSGHDYYTPGSS----------------AQ 64 (323)
T ss_dssp EEEEEEECGGGCCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTCCCBCCCTT----------------CE
T ss_pred CceeeeEcCCCCEEEEEEEEC--CEEEEEEEcCCCcceEEecC-CCCcccccCCCCCCcccc----------------CC
Confidence 455556777 8999999999 89999999999999999999 898887777889999998 42
Q ss_pred CCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCC-------
Q 017049 84 RCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------- 156 (378)
Q Consensus 84 ~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~------- 156 (378)
.. ++|.|++.|++|+.+.|.+++|+|+| |+++++++.|||++...... +.....+||||||++.
T Consensus 65 ~~----~~~~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~p~ 135 (323)
T 1izd_A 65 KI----DGATWSISYGDGSSASGDVYKDKVTV----GGVSYDSQAVESAEKVSSEF-TQDTANDGLLGLAFSSINTVQPT 135 (323)
T ss_dssp EE----EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHH-HHCTTCCEEEECSCGGGCCCBSS
T ss_pred cc----CCCeEEEEcCCCCeEEEEEEEEEEEE----CCEEECceEEEEEEeccccc-cccCCCceEEecCcccccccCCC
Confidence 11 57899999999966999999999999 88889999999999863211 1113579999999953
Q ss_pred --ChHHHHHhhcCCc-cCeEEEEeCCCCceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEeccCCC
Q 017049 157 --ISIVSQLREYGLI-RNVIGHCIGQNGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDL 231 (378)
Q Consensus 157 --~s~~~~l~~~~~i-~~~fsl~l~~~~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~ 231 (378)
.+++++|+++ + +++||+||.++..|.|+|| |++++.|++.|+|+... ..+|.|.+++|+|++ .+...+.
T Consensus 136 ~~~~~~~~l~~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~-~~~~~~~ 209 (323)
T 1izd_A 136 PQKTFFDNVKSS--LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNS---QGFWGFTADGYSIGS-DSSSDSI 209 (323)
T ss_dssp CCCCHHHHHGGG--SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBCT---TSSCEEEESEEEETT-EEECCCE
T ss_pred CCCCHHHHHHHh--ccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCCC---CceEEEEECeEEECC-cccCCCc
Confidence 3589999987 7 9999999998779999999 88889999999999854 389999999999999 6665678
Q ss_pred cEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcceEEEeC
Q 017049 232 TLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVP 311 (378)
Q Consensus 232 ~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~l~ 311 (378)
.++|||||++++||.+++++|.+++.+.... . . ...|..+|. ..+|+|+|+|+ +.++.||
T Consensus 210 ~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~~----~---~---~g~~~~~C~------~~~P~i~f~fg----g~~~~i~ 269 (323)
T 1izd_A 210 TGIADTGTTLLLLDDSIVDAYYEQVNGASYD----S---S---QGGYVFPSS------ASLPDFSVTIG----DYTATVP 269 (323)
T ss_dssp EEEECTTCCSEEECHHHHHHHHTTSTTCEEE----T---T---TTEEEEETT------CCCCCEEEEET----TEEEEEC
T ss_pred eEEEeCCCcceeCCHHHHHHHHHhCCCcEEc----C---c---CCEEEEECC------CCCceEEEEEC----CEEEecC
Confidence 9999999999999999999999988432110 0 0 001223343 25799999995 4899999
Q ss_pred CCceEEEeCCccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 312 PEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 312 ~~~~~~~~~~~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
+++|++...++..|+..+...+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 270 ~~~~~~~~~~~~~C~~~i~~~~--~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 270 GEYISFADVGNGQTFGGIQSNS--GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp HHHHEEEECSTTEEEESEEECT--TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHHeEEecCCCCeEEEEEEcCC--CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 9999987655678987544332 24689999999999999999999999999864
No 22
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=5.1e-55 Score=416.02 Aligned_cols=302 Identities=19% Similarity=0.276 Sum_probs=248.9
Q ss_pred eeeeec----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCCCCC
Q 017049 9 FFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPR 84 (378)
Q Consensus 9 ~~~pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t~~ 84 (378)
..+||. ..|+++|.||||||++.|+|||||+++||+|. +|..+.+..+..|+|++|+ |++
T Consensus 52 ~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~y~~~~Ss---------------T~~ 115 (375)
T 1miq_A 52 DVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSK-KCNSSGCSIKNLYDSSKSK---------------SYE 115 (375)
T ss_dssp BCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBT-TCCSSGGGGSCCBCGGGCT---------------TCE
T ss_pred ceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccC-CCCcccccCCCcCCCccCC---------------ceE
Confidence 346777 78999999999999999999999999999999 8974333367899999983 655
Q ss_pred CCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeee----cCCCCCCCCCCcceEEeeCCCC----
Q 017049 85 CKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYN----QHNPGPLSPPDTAGVLGLGRGR---- 156 (378)
Q Consensus 85 ~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~----~~~~~~~~~~~~~GilGLg~~~---- 156 (378)
. .+|.|.+.|++| .+.|.+++|+|+| |++.+++ .|||++. .. .+.....+||||||++.
T Consensus 116 ~----~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~~-~Fg~~~~~~~~~~---~f~~~~~dGilGLg~~~~s~~ 182 (375)
T 1miq_A 116 K----DGTKVDITYGSG-TVKGFFSKDLVTL----GHLSMPY-KFIEVTDTDDLEP---IYSSVEFDGILGLGWKDLSIG 182 (375)
T ss_dssp E----EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEE-EEEEEEECGGGTT---HHHHSCCCEEEECSSCCTTCS
T ss_pred E----CCcEEEEEeCCC-eEEEEEEEEEEEE----cCceECc-EEEEEEecccccc---ccccCCCceEEeCCCCccccc
Confidence 3 678999999999 5899999999999 8888889 9999998 42 12124689999999965
Q ss_pred --ChHHHHHhhcCCc-cCeEEEEeCCC--CceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEeccC
Q 017049 157 --ISIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK 229 (378)
Q Consensus 157 --~s~~~~l~~~~~i-~~~fsl~l~~~--~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~ 229 (378)
.+++++|+++|++ +++||+||.+. ..|.|+|| |++++.|++.|+|+... .+|.|.++ |+|+++.+ .
T Consensus 183 ~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~w~v~l~-i~v~g~~~--~ 255 (375)
T 1miq_A 183 SIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHD----LYWQIDLD-VHFGKQTM--E 255 (375)
T ss_dssp SCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSS----SSSEEEEE-EEETTEEE--E
T ss_pred CCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCC----ceEEEEEE-EEECCEEc--c
Confidence 4689999999999 99999999864 48999999 77889999999999865 89999999 99999887 5
Q ss_pred CCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcceEEE
Q 017049 230 DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLV 309 (378)
Q Consensus 230 ~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~ 309 (378)
+..++|||||++++||.+++++|.+++++... .. .. .|..+|.. ..+|+|+|+|++ ..+.
T Consensus 256 ~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~~--~g----~~~~~C~~-----~~~P~i~f~f~g----~~~~ 315 (375)
T 1miq_A 256 KANVIVDSGTTTITAPSEFLNKFFANLNVIKV-----PF--LP----FYVTTCDN-----KEMPTLEFKSAN----NTYT 315 (375)
T ss_dssp EEEEEECTTBSSEEECHHHHHHHHHHHTCEEC-----TT--SS----CEEEETTC-----TTCCCEEEECSS----CEEE
T ss_pred cceEEecCCCccEEcCHHHHHHHHHHhCCccc-----CC--CC----eEEEECCC-----CCCCcEEEEECC----EEEE
Confidence 67899999999999999999999999976432 00 00 12233433 358999999964 8999
Q ss_pred eCCCceEEEeC--CccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 310 VPPEAYLVISG--RKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 310 l~~~~~~~~~~--~~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
|++++|+++.. ....|+..+...+. ..+.||||++|||++|+|||++++|||||+++
T Consensus 316 l~~~~yi~~~~~~g~~~C~~~~~~~~~-~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 316 LEPEYYMNPILEVDDTLCMITMLPVDI-DSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp ECGGGSEEESSSSSCSEEEESEEECCS-SSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred ECHHHhEeeccCCCCCeEEEEEEECCC-CCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 99999999764 24589744433321 12689999999999999999999999999975
No 23
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=8.7e-54 Score=409.14 Aligned_cols=337 Identities=17% Similarity=0.329 Sum_probs=254.6
Q ss_pred eeeeeec-----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCCC
Q 017049 8 FFFFPIF-----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNP 82 (378)
Q Consensus 8 ~~~~pl~-----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t 82 (378)
++.+||. ..|+++|.|||| |+|||||+++||+|. +| . .| +.++|.++.|...+....
T Consensus 2 ~~~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~-~~---~-----~~----~~~~C~s~~C~~~~~~~~ 63 (381)
T 1t6e_X 2 PVLAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD-GG---Q-----PP----AEIPCSSPTCLLANAYPA 63 (381)
T ss_dssp CEEEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCC-TT---C-----CC----CCCBTTSHHHHHHHSSCC
T ss_pred ceEEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCC-CC---C-----CC----CccCCCCchhccccCCCC
Confidence 4678887 899999999998 999999999999887 43 2 12 247888888865332211
Q ss_pred CCCCC-------CCCCC-eeEeEeCCCCeEEEEEEEEEEEEeecCCccccccE----EEeeeeecCCCCCCCCCCcceEE
Q 017049 83 PRCKH-------PNDQC-DYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPL----TFGCGYNQHNPGPLSPPDTAGVL 150 (378)
Q Consensus 83 ~~~~~-------~~~~~-~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~----~fg~~~~~~~~~~~~~~~~~Gil 150 (378)
..|.. .++.| .|.+.|++|+.+.|.+++|+|+|++.+|+..++++ .|||+....... + ....+|||
T Consensus 64 ~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~-~-~~~~dGIl 141 (381)
T 1t6e_X 64 PGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLAS-L-PRGSTGVA 141 (381)
T ss_dssp TTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTT-S-CTTEEEEE
T ss_pred CCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCC-C-CCCCceEE
Confidence 23321 12456 59999999977799999999999765444555665 579998752111 1 25789999
Q ss_pred eeCCCCChHHHHHhhcCCccCeEEEEeCCCCceeEEeCC-CC---CCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEe
Q 017049 151 GLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGD-GK---VPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSC 226 (378)
Q Consensus 151 GLg~~~~s~~~~l~~~~~i~~~fsl~l~~~~~G~l~fGd-~~---~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~ 226 (378)
|||++..+++.||.++++++++||+||.+...|.|+||. +. ++.+++.|+|+...... .+|.|.|++|+||++.+
T Consensus 142 GLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~-~~y~v~l~~i~vg~~~~ 220 (381)
T 1t6e_X 142 GLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGS-PAHYISARSIVVGDTRV 220 (381)
T ss_dssp ECSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTC-CSCEECEEEEEETTEEC
T ss_pred EeCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCC-cceEEEEEEEEEcCEEe
Confidence 999999999999999985599999999876799999993 22 35799999999875321 35669999999999988
Q ss_pred ccC-----CCcEEEecCCcceeeChHHHHHHHHHHHHHhcC-----CCCCCC-CCCCCCCceeeCCccCccccccccccE
Q 017049 227 GLK-----DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIG-----TPLKLA-PDDKTLPICWRGPFKALGQVTEYFKPL 295 (378)
Q Consensus 227 ~~~-----~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~-----~~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~P~l 295 (378)
... ...+||||||++++||++++++|.+++.+.+.. ..+.+. .....+..|+..++.........+|+|
T Consensus 221 ~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i 300 (381)
T 1t6e_X 221 PVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNV 300 (381)
T ss_dssp CCCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCE
T ss_pred cCCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCcCCeE
Confidence 653 246999999999999999999999999887631 112221 122345678876543222223468999
Q ss_pred EEEEcCCCcceEEEeCCCceEEEeCCccEEEEEEcCCCC----CCCCceeEcceeeeeeEEEEeCCCCEEeeecCCC
Q 017049 296 ALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEA----EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDC 368 (378)
Q Consensus 296 ~~~f~~~~~~~~~~l~~~~~~~~~~~~~~C~~~~~~~~~----~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~c 368 (378)
+|+|++ +..+.|++++|+++..++..|++++..... ...+.||||+.|||++|+|||++++|||||+++.
T Consensus 301 ~f~f~g---g~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~~ 374 (381)
T 1t6e_X 301 QLGLDG---GSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPH 374 (381)
T ss_dssp EEEETT---SCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCT
T ss_pred EEEECC---CcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEecccC
Confidence 999986 589999999999876567789987764421 1135799999999999999999999999999876
No 24
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=4.6e-55 Score=409.05 Aligned_cols=305 Identities=17% Similarity=0.265 Sum_probs=249.0
Q ss_pred eeeeeeeec--ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCCCC
Q 017049 6 IEFFFFPIF--SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPP 83 (378)
Q Consensus 6 ~~~~~~pl~--~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t~ 83 (378)
++....|+. ..|+++|.|| ||+++|+|||||+++||+|. +|..|.++.++.|+|++| ++
T Consensus 4 g~v~~~~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~S----------------s~ 64 (323)
T 1bxo_A 4 GVATNTPTANDEEYITPVTIG--GTTLNLNFDTGSADLWVFST-ELPASQQSGHSVYNPSAT----------------GK 64 (323)
T ss_dssp EEEEEEECGGGSCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCHHHH----------------CE
T ss_pred CceeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCchhccCCCCCCcccC----------------Cc
Confidence 566667777 8999999999 99999999999999999999 898887778899999888 32
Q ss_pred CCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCC-------
Q 017049 84 RCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------- 156 (378)
Q Consensus 84 ~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~------- 156 (378)
.. ++|.|++.|++|+.+.|.+++|+|+| |+..++++.|||++...+.. +.....+||||||++.
T Consensus 65 ~~----~~~~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~~~ 135 (323)
T 1bxo_A 65 EL----SGYTWSISYGDGSSASGNVFTDSVTV----GGVTAHGQAVQAAQQISAQF-QQDTNNDGLLGLAFSSINTVQPQ 135 (323)
T ss_dssp EE----EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHH-HTCTTCSEEEECSCGGGCCCBSS
T ss_pred cc----CCCeEEEEeCCCCeEEEEEEEEEEEE----CCEEECcEEEEEEEecCccc-ccCCCCceEEEeCcccccccccC
Confidence 21 57899999999966999999999999 88889999999999863211 1114679999999943
Q ss_pred --ChHHHHHhhcCCc-cCeEEEEeCCCCceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEeccCCC
Q 017049 157 --ISIVSQLREYGLI-RNVIGHCIGQNGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDL 231 (378)
Q Consensus 157 --~s~~~~l~~~~~i-~~~fsl~l~~~~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~ 231 (378)
.+++++|+++ + +++||+||.++..|.|+|| |++++.|++.|+|+... ..+|.|.+++|+|++ +...+.
T Consensus 136 ~~~~~~~~l~~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~--~~~~~~ 208 (323)
T 1bxo_A 136 SQTTFFDTVKSS--LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNS---QGFWSFNVDSYTAGS--QSGDGF 208 (323)
T ss_dssp CCCCHHHHHGGG--BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEEEEEEETT--EEEEEE
T ss_pred CCCCHHHHHHHh--cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCC---CCeEEEEEeeEEECC--ccCCCc
Confidence 4589999987 7 9999999998789999999 78899999999999854 388999999999999 333457
Q ss_pred cEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcceEEEeC
Q 017049 232 TLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVP 311 (378)
Q Consensus 232 ~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~l~ 311 (378)
.++|||||++++||++++++|.+++...... . .. .-|..+|. ..+|+|+|+|+ +..+.||
T Consensus 209 ~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~~----~--~~----g~~~~~C~------~~~P~i~f~fg----g~~~~l~ 268 (323)
T 1bxo_A 209 SGIADTGTTLLLLDDSVVSQYYSQVSGAQQD----S--NA----GGYVFDCS------TNLPDFSVSIS----GYTATVP 268 (323)
T ss_dssp EEEECTTCSSEEECHHHHHHHHTTSTTCEEE----T--TT----TEEEECTT------CCCCCEEEEET----TEEEEEC
T ss_pred eEEEeCCCCceeCCHHHHHHHHHhCCCceEc----C--cC----CEEEEECC------CCCceEEEEEC----CEEEEEC
Confidence 8999999999999999999999998432110 0 00 01222343 25799999995 4899999
Q ss_pred CCceEEEeCC-ccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 312 PEAYLVISGR-KNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 312 ~~~~~~~~~~-~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
+++|++...+ ...|+..+...+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 269 ~~~~~~~~~~~~~~C~~~i~~~~--~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 269 GSLINYGPSGDGSTCLGGIQSNS--GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp HHHHEEEECSSSSCEEESEEECT--TCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HHHeEEeccCCCCeEEEEEECCC--CCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 9999987644 368987554332 24689999999999999999999999999974
No 25
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=3.1e-54 Score=421.41 Aligned_cols=320 Identities=24% Similarity=0.366 Sum_probs=252.3
Q ss_pred eeeeeec----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCC---CCCCCCCCCCCCCCCcccCCchhccCCCCC
Q 017049 8 FFFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT---GCTKPPEKQYKPHKNIVPCSNPRCAALHWP 80 (378)
Q Consensus 8 ~~~~pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~---~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~ 80 (378)
...+||. ..|+++|.||||||+++|+|||||+++||+|. .|. .|. .++.|+|++|+
T Consensus 41 ~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~-~C~~~~~C~--~~~~y~~~~Ss-------------- 103 (478)
T 1qdm_A 41 GDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSA-KCYFSIACY--LHSRYKAGASS-------------- 103 (478)
T ss_dssp SCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCSCGGGG--GSCCBCGGGCT--------------
T ss_pred CceEEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecC-CCCCCcccc--CCCCCCcccCC--------------
Confidence 3457776 78999999999999999999999999999998 885 576 56789999983
Q ss_pred CCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCCC---
Q 017049 81 NPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRI--- 157 (378)
Q Consensus 81 ~t~~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~~--- 157 (378)
|++. .++.|.+.|++| .+.|.+++|+|+| |++.++++.||+++...+. .+....++||||||++..
T Consensus 104 -T~~~----~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~~~~Fg~a~~~~~~-~f~~~~~dGIlGLg~~~~s~~ 172 (478)
T 1qdm_A 104 -TYKK----NGKPAAIQYGTG-SIAGYFSEDSVTV----GDLVVKDQEFIEATKEPGI-TFLVAKFDGILGLGFKEISVG 172 (478)
T ss_dssp -TCBC----CCCEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCBS-HHHHCSSSEEEECSCGGGCGG
T ss_pred -Ceee----CCcEEEEEcCCC-CeEEEEEEEEEEE----CCeEECCEEEEEEEecCCc-ccccccccceecccccccccC
Confidence 6654 678999999999 6999999999999 8888999999999876321 111246799999999654
Q ss_pred ---hHHHHHhhcCCc-cCeEEEEeCCC----CceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEec
Q 017049 158 ---SIVSQLREYGLI-RNVIGHCIGQN----GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCG 227 (378)
Q Consensus 158 ---s~~~~l~~~~~i-~~~fsl~l~~~----~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~ 227 (378)
+++++|+++|++ +++||+||.+. ..|.|+|| |++++.|++.|+|+... .+|.|.+++|.|+++.+.
T Consensus 173 ~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~----~~w~v~l~~i~v~g~~~~ 248 (478)
T 1qdm_A 173 KAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQK----GYWQFDMGDVLVGGKSTG 248 (478)
T ss_dssp GCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEE----TTEEEEECCEEETTEECS
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCC----CeEEEEEeEEEECCEEEe
Confidence 478999999999 99999999864 48999999 78889999999999865 899999999999998875
Q ss_pred c--CCCcEEEecCCcceeeChHHHHHHHHHHHHHh----------------------cCC-------CCCCCCCCCC---
Q 017049 228 L--KDLTLIFDSGASYAYFTSRVYQEIVSLIMRDL----------------------IGT-------PLKLAPDDKT--- 273 (378)
Q Consensus 228 ~--~~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~----------------------~~~-------~~~~~~~~~~--- 273 (378)
. .+..+++||||++++||.+++++|.+++++.. ... .+.-|.....
T Consensus 249 ~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~ 328 (478)
T 1qdm_A 249 FCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGV 328 (478)
T ss_dssp TTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC--------
T ss_pred ecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCccccc
Confidence 4 46789999999999999999999999986531 000 0001110000
Q ss_pred ---------------------------------------------------CCceee---------CCccCccccccccc
Q 017049 274 ---------------------------------------------------LPICWR---------GPFKALGQVTEYFK 293 (378)
Q Consensus 274 ---------------------------------------------------~~~c~~---------~~~~~~~~~~~~~P 293 (378)
...|+. .+|+.. ..+|
T Consensus 329 ~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~----~~lP 404 (478)
T 1qdm_A 329 SAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSL----GSMP 404 (478)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGG----TTCC
T ss_pred cccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccc----cccc
Confidence 012222 233322 3689
Q ss_pred cEEEEEcCCCcceEEEeCCCceEEEeCC--ccEEEEEEcCCC--CCCCCceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 294 PLALSFTNRRNSVRLVVPPEAYLVISGR--KNVCLGILNGSE--AEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 294 ~l~~~f~~~~~~~~~~l~~~~~~~~~~~--~~~C~~~~~~~~--~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
+|+|+|++ ..|.|+|++|+++... +..|++.+...+ .+..+.||||+.|||++|+|||++++|||||+++
T Consensus 405 ~i~f~~gg----~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 405 DIEFTIGG----KKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp CEEEEETT----EEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cEEEEECC----EEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 99999964 8999999999997654 357986543222 1234689999999999999999999999999864
No 26
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.4e-54 Score=420.31 Aligned_cols=301 Identities=18% Similarity=0.277 Sum_probs=251.2
Q ss_pred eeeeeec----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCC--CCCCCCCCCCCCCCCcccCCchhccCCCCCC
Q 017049 8 FFFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT--GCTKPPEKQYKPHKNIVPCSNPRCAALHWPN 81 (378)
Q Consensus 8 ~~~~pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~--~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~ 81 (378)
...+||. ..|+++|.||||||+++|++||||+++||+|. .|. .|. .+..|+|++|+
T Consensus 126 ~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~-~C~s~~C~--~~~~ydps~Ss--------------- 187 (451)
T 3qvc_A 126 FDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSI-KCTSESCE--SKNHYDSSKSK--------------- 187 (451)
T ss_dssp -CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBT-TCCSGGGT--TSCCBCGGGCT---------------
T ss_pred CCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCccccC--CCCCCCCCCCc---------------
Confidence 3456777 78999999999999999999999999999999 894 564 67899999993
Q ss_pred CCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeee----cCCCCCCCCCCcceEEeeCCCC-
Q 017049 82 PPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYN----QHNPGPLSPPDTAGVLGLGRGR- 156 (378)
Q Consensus 82 t~~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~----~~~~~~~~~~~~~GilGLg~~~- 156 (378)
|++. .++.|.+.|++| .+.|.+++|+|+| |+..++ +.||+++. ..+ +.....+||||||++.
T Consensus 188 T~~~----~~~~f~i~YgdG-s~~G~~~~Dtv~i----gg~~v~-~~Fg~a~~t~~~~~~---f~~~~~dGILGLg~~~~ 254 (451)
T 3qvc_A 188 TYEK----DDTPVKLTSKAG-TISGIFSKDLVTI----GKLSVP-YKFIEMTEIVGFEPF---YSESDVDGVFGLGWKDL 254 (451)
T ss_dssp TCEE----EEEEEEEECSSE-EEEEEEEEEEEEE----TTEEEE-EEEEEEEEEEECTTH---HHHSCCCEEEECSSBCS
T ss_pred cccc----CCCEEEEEECCC-EEEEEEEEEEEEE----CCEEEE-EEEEEEEeccccCCC---ccCCCCCEEEecCCCcc
Confidence 6654 678999999999 5999999999999 888889 99999988 422 2224679999999954
Q ss_pred -----ChHHHHHhhcCCc-cCeEEEEeCCC--CceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEe
Q 017049 157 -----ISIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSC 226 (378)
Q Consensus 157 -----~s~~~~l~~~~~i-~~~fsl~l~~~--~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~ 226 (378)
.+++++|+++|+| +++||+||.+. ..|.|+|| |++++.|++.|+|+... .+|.|.++ |.|++.
T Consensus 255 s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~----~~w~v~l~-I~Vgg~-- 327 (451)
T 3qvc_A 255 SIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHD----LMWQVDLD-VHFGNV-- 327 (451)
T ss_dssp SSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSST----TSSEEEEE-EEETTE--
T ss_pred cccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccC----CeeEEEEE-EEECCc--
Confidence 5799999999999 99999999964 48999999 88899999999999965 89999999 999998
Q ss_pred ccCCCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcce
Q 017049 227 GLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSV 306 (378)
Q Consensus 227 ~~~~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~ 306 (378)
......++|||||++++||.+++++|.+++++.... ...+|..+|. ...+|+|+|+|++ .
T Consensus 328 ~~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~~-----------~~g~y~v~C~-----~~~~P~itf~fgg----~ 387 (451)
T 3qvc_A 328 SSKKANVILDSATSVITVPTEFFNQFVESASVFKVP-----------FLSLYVTTCG-----NTKLPTLEYRSPN----K 387 (451)
T ss_dssp EEEEEEEEECTTBSSEEECHHHHHHHHTTTTCEECT-----------TSSCEEEETT-----CTTCCCEEEEETT----E
T ss_pred cCCCceEEEeCCCccccCCHHHHHHHHHHcCCeecC-----------CCCeEEeeCC-----cCcCCcEEEEECC----E
Confidence 334678999999999999999999999999764321 0113444555 2357999999975 8
Q ss_pred EEEeCCCceEEEeC--CccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 307 RLVVPPEAYLVISG--RKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 307 ~~~l~~~~~~~~~~--~~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
.+.||+++|+.... .+..|+..+...+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 388 ~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~~-~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 388 VYTLEPKQYLEPLENIFSALCMLNIVPIDLE-KNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EEEECHHHHEEECTTTSTTEEEECEEECCCS-TTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEcHHHheeecccCCCCeEEEEEEeCCCC-CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99999999999764 246898665544321 4689999999999999999999999999975
No 27
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=2.6e-54 Score=417.86 Aligned_cols=305 Identities=18% Similarity=0.250 Sum_probs=250.0
Q ss_pred eeeeec----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCCCCC
Q 017049 9 FFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPR 84 (378)
Q Consensus 9 ~~~pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t~~ 84 (378)
..+||. ..|+++|.||||||+++|+|||||+++||+|. +|..+.+..++.|+|++|+ |++
T Consensus 128 ~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~-~C~~~~C~~~~~ydps~Ss---------------T~~ 191 (453)
T 2bju_A 128 DNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSV-KCTTAGCLTKHLYDSSKSR---------------TYE 191 (453)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSTTGGGSCCBCGGGCT---------------TCE
T ss_pred CceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEecc-CCCccccCCCCcCCCccCC---------------cee
Confidence 346776 79999999999999999999999999999999 8974444467899999983 665
Q ss_pred CCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecC--CCCCCCCCCcceEEeeCCCC------
Q 017049 85 CKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQH--NPGPLSPPDTAGVLGLGRGR------ 156 (378)
Q Consensus 85 ~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~--~~~~~~~~~~~GilGLg~~~------ 156 (378)
. .+|.|.+.|++| .+.|.+++|+|+| |++.++ +.|||++... +.. +.....+||||||++.
T Consensus 192 ~----~~~~~~i~YgdG-s~~G~~~~Dtv~i----g~~~v~-~~Fg~a~~~~~~g~~-f~~~~~dGIlGLg~~~~s~~~~ 260 (453)
T 2bju_A 192 K----DGTKVEMNYVSG-TVSGFFSKDLVTV----GNLSLP-YKFIEVIDTNGFEPT-YTASTFDGILGLGWKDLSIGSV 260 (453)
T ss_dssp E----EEEEEEEECSSS-EEEEEEEEEEEEE----TTEEEE-EEEEEEEECGGGTTH-HHHSSCCEEEECSCGGGSTTCC
T ss_pred E----CCcEEEEEcCCC-CeEEEEEEEEEEE----eCcEEE-EEEEEEEEecccCcc-ccccCCceeEeccCCcccccCC
Confidence 4 678999999999 5899999999999 888888 9999999873 211 1124589999999954
Q ss_pred ChHHHHHhhcCCc-cCeEEEEeCCC--CceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEeccCCC
Q 017049 157 ISIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDL 231 (378)
Q Consensus 157 ~s~~~~l~~~~~i-~~~fsl~l~~~--~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~ 231 (378)
.+++++|+++|.+ +++||+||.+. ..|.|+|| |++++.|++.|+|+... .+|.|.++ |.|++.. . .+.
T Consensus 261 ~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~----~~w~V~l~-I~Vgg~~-~-~~~ 333 (453)
T 2bju_A 261 DPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHD----LYWQITLD-AHVGNIM-L-EKA 333 (453)
T ss_dssp CCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEE----TTEEEEEE-EEETTEE-E-EEE
T ss_pred CcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCC----ceEEEEEE-EEECcEE-e-ccc
Confidence 4689999999999 99999999864 68999999 77889999999999875 89999999 9999944 3 567
Q ss_pred cEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcceEEEeC
Q 017049 232 TLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVP 311 (378)
Q Consensus 232 ~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~l~ 311 (378)
.++|||||++++||.+++++|.+++++... ... ..|..+|.. ..+|+|+|+|++ ..+.||
T Consensus 334 ~aIiDSGTsl~~lP~~~~~~l~~~i~~~~~--------~~g---~~~~v~C~~-----~~~P~itf~fgg----~~~~l~ 393 (453)
T 2bju_A 334 NCIVDSGTSAITVPTDFLNKMLQNLDVIKV--------PFL---PFYVTLCNN-----SKLPTFEFTSEN----GKYTLE 393 (453)
T ss_dssp EEEECTTCCSEEECHHHHHHHTTTSSCEEC--------TTS---SCEEEETTC-----TTCCCEEEECSS----CEEEEC
T ss_pred cEEEcCCCCeEecCHHHHHHHHHHhCCccc--------CCC---ceEEEecCC-----CCCCcEEEEECC----EEEEEC
Confidence 899999999999999999999988865311 000 123344543 358999999964 899999
Q ss_pred CCceEEEeCC--ccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCCC
Q 017049 312 PEAYLVISGR--KNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDC 368 (378)
Q Consensus 312 ~~~~~~~~~~--~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~c 368 (378)
+++|+++... +..|+..+...+. ..+.||||++|||++|+|||++++|||||+++-
T Consensus 394 ~~~yi~~~~~~g~~~C~~~~~~~~~-~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~~ 451 (453)
T 2bju_A 394 PEYYLQHIEDVGPGLCMLNIIGLDF-PVPTFILGDPFMRKYFTVFDYDNHSVGIALAKK 451 (453)
T ss_dssp HHHHEEECTTTSTTEEEECEEECCC-SSCEEEECHHHHHHEEEEEETTTTEEEEEEECS
T ss_pred HHHhEeecccCCCceEEEEEEeCCC-CCCCEEECHHHhhcEEEEEECCCCEEEEEEccc
Confidence 9999997653 4689855443321 135899999999999999999999999999863
No 28
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2.2e-54 Score=405.47 Aligned_cols=303 Identities=14% Similarity=0.183 Sum_probs=249.2
Q ss_pred eeeeec----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCC--CCCCCCCCCCCCCCCcccCCchhccCCCCCCC
Q 017049 9 FFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT--GCTKPPEKQYKPHKNIVPCSNPRCAALHWPNP 82 (378)
Q Consensus 9 ~~~pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~--~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t 82 (378)
+..||. ..|+++|.|| ||+++|+|||||+++||+|. +|. .|....++.|+|++| |
T Consensus 7 ~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~~~y~~~~S----------------T 67 (330)
T 1yg9_A 7 LYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQ-ECVGGACVCPNLQKYEKLKP----------------K 67 (330)
T ss_dssp SCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECT-TCCSGGGGSTTCCCCCCSSC----------------E
T ss_pred eEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCCccCcccccCccCCCCC----------------c
Confidence 335665 7899999999 99999999999999999999 896 674346789999888 3
Q ss_pred CCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCCCh----
Q 017049 83 PRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRIS---- 158 (378)
Q Consensus 83 ~~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~~s---- 158 (378)
++. .++.|++.|++| .+.|.+++|+|+| |++.++++.|||++.. .. .+.....+||||||++..+
T Consensus 68 ~~~----~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~~~~~~fg~~~~~-~~-~f~~~~~~GilGLg~~~~s~~~~ 136 (330)
T 1yg9_A 68 YIS----DGNVQVKFFDTG-SAVGRGIEDSLTI----SQLTTSQQDIVLADEL-SQ-EVCILSADVVVGIAAPGCPNALK 136 (330)
T ss_dssp EEE----EEEEEEEETTTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEE-CT-HHHHTTCSEEEECSCTTSCCTTS
T ss_pred eEE----CCCEEEEEECCc-eEEEEEEEEEEEE----CCEEEcCeEEEEEEEc-cc-ccccccCceEEEcCcchhccccC
Confidence 332 567999999999 6699999999999 8888999999999987 21 1112467999999997654
Q ss_pred ---HHHHHhhcCCccCeEEEEeCCC--C--ceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEeccC
Q 017049 159 ---IVSQLREYGLIRNVIGHCIGQN--G--RGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK 229 (378)
Q Consensus 159 ---~~~~l~~~~~i~~~fsl~l~~~--~--~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~ 229 (378)
++++|+++++++++||+||.+. . .|.|+|| |++++.|++.|+|+... .+|.|.+++|+|+++.+...
T Consensus 137 ~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~w~v~l~~i~v~~~~~~~~ 212 (330)
T 1yg9_A 137 GKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGD----DSWKFRLDGVKIGDTTVAPA 212 (330)
T ss_dssp CCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCT----TSCCEECSEEEETTEEEECT
T ss_pred CCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCC----CEEEEEeCeEEECCEEEcCC
Confidence 9999999998899999999854 2 8999999 78889999999999854 89999999999999887656
Q ss_pred CCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCcee-eCCccCccccccccccEEEEEcCCCcceEE
Q 017049 230 DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICW-RGPFKALGQVTEYFKPLALSFTNRRNSVRL 308 (378)
Q Consensus 230 ~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~-~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~ 308 (378)
+..++|||||++++||.+++++|.+++++.... .. +..| ..+|... ..+|+|+|+|+ +.++
T Consensus 213 ~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~--------~g--~~~~~~~~C~~~----~~~p~i~f~fg----g~~~ 274 (330)
T 1yg9_A 213 GTQAIIDTSKAIIVGPKAYVNPINEAIGCVVEK--------TT--TRRICKLDCSKI----PSLPDVTFVIN----GRNF 274 (330)
T ss_dssp TCEEEECTTCSSEEEEHHHHHHHHHHHTCEEEE--------CS--SCEEEEECGGGG----GGSCCEEEEET----TEEE
T ss_pred CcEEEEecCCccccCCHHHHHHHHHHhCCcccC--------CC--ceEEEEEECCCc----cccCcEEEEEC----CEEE
Confidence 789999999999999999999999999664320 00 0123 4455532 25799999995 4899
Q ss_pred EeCCCceEEEeCCccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 309 VVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 309 ~l~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
.||+++|+++. +..|+..+.... ..+.||||++|||++|+|||++++|||||+++
T Consensus 275 ~l~~~~y~~~~--~~~C~~~i~~~~--~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 275 NISSQYYIQQN--GNLCYSGFQPCG--HSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EECHHHHEEEE--TTEEEESEEEET--TCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EECHHHhcccC--CCcEEEEEEeCC--CCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 99999999976 567985544321 24589999999999999999999999999975
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=8.5e-53 Score=403.07 Aligned_cols=312 Identities=21% Similarity=0.362 Sum_probs=243.9
Q ss_pred ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCCCCCCCCCCCCCee
Q 017049 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDY 94 (378)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t~~~~~~~~~~~~ 94 (378)
..|+++|.||||||+++|+|||||+++||+|. +|..| ++.|+|++|+ |++. ..|.|
T Consensus 13 ~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~~----~~~f~~~~Ss---------------T~~~----~~~~~ 68 (383)
T 2ewy_A 13 RGYYLEMLIGTPPQKLQILVDTGSSNFAVAGT-PHSYI----DTYFDTERSS---------------TYRS----KGFDV 68 (383)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CBTTB----SCCCCGGGCT---------------TCEE----EEEEE
T ss_pred CcEEEEEEecCCCceEEEEEecCCCceEEecC-CCCcc----ccCcccccCc---------------ccee----CCceE
Confidence 67999999999999999999999999999998 78765 4789999983 6664 67899
Q ss_pred EeEeCCCCeEEEEEEEEEEEEeecCCcccc--ccEEEeeeeecCCCCCCCCCCcceEEeeCCCC--------ChHHHHHh
Q 017049 95 EIEYGDGGSSIGALVTDLFPLRFSNGSVFN--VPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR--------ISIVSQLR 164 (378)
Q Consensus 95 ~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~--~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~--------~s~~~~l~ 164 (378)
++.|++| .+.|.+++|+|+| ++... ..+.|++........ ......+||||||++. .+++++|+
T Consensus 69 ~i~Yg~G-s~~G~~~~Dtv~i----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~ 142 (383)
T 2ewy_A 69 TVKYTQG-SWTGFVGEDLVTI----PKGFNTSFLVNIATIFESENFF-LPGIKWNGILGLAYATLAKPSSSLETFFDSLV 142 (383)
T ss_dssp EEECSSC-EEEEEEEEEEEEE----TTTEEEEEEEEEEEEEEEESCS-CTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred EEEECCc-EEEEEEEEEEEEE----CCCccceeEEEEEEEEeeccee-eccCcCceEEecCchhcccccccccCHHHHHH
Confidence 9999999 6799999999999 53211 245678766542221 1124679999999854 46899999
Q ss_pred hcCCccCeEEEEeCC---------CCceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEeccC----
Q 017049 165 EYGLIRNVIGHCIGQ---------NGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK---- 229 (378)
Q Consensus 165 ~~~~i~~~fsl~l~~---------~~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~---- 229 (378)
+|+.++++||+||++ ...|.|+|| |++++.|++.|+|+... .+|.|.+++|+|+++.+...
T Consensus 143 ~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~~~~~~ 218 (383)
T 2ewy_A 143 TQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE----WYYQIEILKLEIGGQSLNLDCREY 218 (383)
T ss_dssp HHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB----TTBBCCEEEEEETTEECCCCTTTT
T ss_pred HccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC----ceEEEEEEEEEECCEEcccccccc
Confidence 998888899999962 358999999 78899999999999876 89999999999999988642
Q ss_pred -CCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCC---CCCCceeeCCccCccccccccccEEEEEcCCC--
Q 017049 230 -DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDD---KTLPICWRGPFKALGQVTEYFKPLALSFTNRR-- 303 (378)
Q Consensus 230 -~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~---~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~-- 303 (378)
...++|||||++++||.+++++|.+++.+... ....... .....|+..+. .....+|.|+|+|++..
T Consensus 219 ~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~---~~~~~~~~~~~~~~~C~~~~~----~~~~~~P~i~f~f~g~~~~ 291 (383)
T 2ewy_A 219 NADKAIVDSGTTLLRLPQKVFDAVVEAVARASL---IPEFSDGFWTGSQLACWTNSE----TPWSYFPKISIYLRDENSS 291 (383)
T ss_dssp TSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTC---SSCCCHHHHHTSEEEEECSSS----CGGGGSCCEEEEEECSSTT
T ss_pred CCccEEEEcCCccccCCHHHHHHHHHHHhhhcc---cccCccccccccccccccCCc----ccHhhCCcEEEEECCCCCC
Confidence 36899999999999999999999999988654 1111000 11124554321 11236899999998731
Q ss_pred cceEEEeCCCceEEEeC---CccEEEEE-EcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCCCCcc
Q 017049 304 NSVRLVVPPEAYLVISG---RKNVCLGI-LNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTL 371 (378)
Q Consensus 304 ~~~~~~l~~~~~~~~~~---~~~~C~~~-~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~c~~~ 371 (378)
++.++.|++++|+.+.. .+..|+++ +... .+.||||++|||++|+|||++++|||||+++|+..
T Consensus 292 ~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~----~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 359 (383)
T 2ewy_A 292 RSFRITILPQLYIQPMMGAGLNYECYRFGISPS----TNALVIGATVMEGFYVIFDRAQKRVGFAASPCAEI 359 (383)
T ss_dssp EEEEEEECHHHHEEEECCCTTCSEEEEESEEEE----SSCEEECHHHHTTEEEEEETTTTEEEEEECTTCBS
T ss_pred ceEEEEEChHHheeecccCCCCceeEEEEecCC----CCcEEEChHHhCCeeEEEECCCCeEEEEeccCCCc
Confidence 12489999999998753 35679753 2222 35799999999999999999999999999999753
No 30
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.7e-52 Score=403.47 Aligned_cols=317 Identities=19% Similarity=0.285 Sum_probs=247.7
Q ss_pred ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCCCCCCCCCCCCCee
Q 017049 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDY 94 (378)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t~~~~~~~~~~~~ 94 (378)
..|+++|.||||||+++|+|||||+++||+|. +| |. .+..|+|++|+ |++. ..|.|
T Consensus 28 ~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c--~~--~~~~y~~~~Ss---------------T~~~----~~~~~ 83 (402)
T 3vf3_A 28 QGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLSS---------------TYRD----LRKGV 83 (402)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGCT---------------TCEE----EEEEE
T ss_pred CEEEEEEEECCCCeEEEEEEeCCCCceEEccC-CC--Cc--ccCCcCcccCc---------------cccc----CCCEE
Confidence 68999999999999999999999999999998 76 32 56899999993 6664 67899
Q ss_pred EeEeCCCCeEEEEEEEEEEEEeecCC-ccccc-cEEEeeeeecCCCCCCCCCCcceEEeeCCC--------CChHHHHHh
Q 017049 95 EIEYGDGGSSIGALVTDLFPLRFSNG-SVFNV-PLTFGCGYNQHNPGPLSPPDTAGVLGLGRG--------RISIVSQLR 164 (378)
Q Consensus 95 ~~~y~~g~~~~G~~~~D~v~l~~~~g-~~~~~-~~~fg~~~~~~~~~~~~~~~~~GilGLg~~--------~~s~~~~l~ 164 (378)
.+.|++| .+.|.+++|+|+| + +.... .+.|+++....... ......+||||||++ ..+++++|+
T Consensus 84 ~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~~~~~~~~~~~~~~-~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~ 157 (402)
T 3vf3_A 84 YVPYTQG-KWEGELGTDLVSI----PHGPNVTVRANIAAITESDKFF-INGSNWEGILGLAYAEIARPDDSLEPFFDSLV 157 (402)
T ss_dssp EEECSSC-EEEEEEEEEEEEC----TTSCSCEEEEEEEEEEEEESCS-CTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred EEEECcE-EEEEEEEEEEEEE----CCccccceeeeEEEEEcccccc-ccCCCccceEEcCchhhcccCCcCCcHHHHHH
Confidence 9999999 6899999999999 5 33333 34577766653221 123568999999984 357999999
Q ss_pred hcCCccCeEEEEeCC------------CCceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEeccC-
Q 017049 165 EYGLIRNVIGHCIGQ------------NGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK- 229 (378)
Q Consensus 165 ~~~~i~~~fsl~l~~------------~~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~- 229 (378)
+++.|.++||+||.+ ...|.|+|| |++++.|++.|+|+... .+|.|.+++|+|+++.+...
T Consensus 158 ~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~w~v~l~~i~v~g~~~~~~~ 233 (402)
T 3vf3_A 158 KQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE----WYYEVIIVRVEINGQDLKMDC 233 (402)
T ss_dssp HHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSB----TTBEECEEEEEETTEECCCCG
T ss_pred HccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcC----cEEEEEEeEEEECCEEecccc
Confidence 999998899999962 348999999 88899999999999875 89999999999999988653
Q ss_pred ----CCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCC---CCCCceeeCCccCccccccccccEEEEEcCC
Q 017049 230 ----DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDD---KTLPICWRGPFKALGQVTEYFKPLALSFTNR 302 (378)
Q Consensus 230 ----~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~---~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~ 302 (378)
...++|||||++++||.+++++|++++++... ....... .....|+...- .....+|+|+|+|++.
T Consensus 234 ~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~---~~~~~~~~~~~~~~~C~~~~~----~~~~~~P~i~f~f~g~ 306 (402)
T 3vf3_A 234 KEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS---TEKFPDGFWLGEQLVCWQAGT----TPWNIFPVISLYLMGE 306 (402)
T ss_dssp GGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT---TSCCCTTGGGTCSCEEEETTC----CCGGGSCCEEEEEECS
T ss_pred cccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhcc---ccccCcccccccccccccccc----chHhhCCceEEEEecC
Confidence 46899999999999999999999999998753 1111111 11235665321 1123689999999873
Q ss_pred C--cceEEEeCCCceEEEeCCc----cEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCCCCcccccc
Q 017049 303 R--NSVRLVVPPEAYLVISGRK----NVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLN 375 (378)
Q Consensus 303 ~--~~~~~~l~~~~~~~~~~~~----~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~c~~~~~~~ 375 (378)
. ...++.|++++|+.+..+. ..|+++.... ..+.||||++|||++|+|||++++|||||+++|+...+++
T Consensus 307 ~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~---~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~ 382 (402)
T 3vf3_A 307 VTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ---SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFR 382 (402)
T ss_dssp STTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEE---ESSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCBCSSC
T ss_pred CCCceEEEEECHHHheehhccCCCCCceEEEEeccC---CCCcEEEChHHhCCeEEEEECCCCEEEEEecccCcccCcc
Confidence 1 1236999999999876442 4798632111 2357999999999999999999999999999999766553
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2.3e-52 Score=401.43 Aligned_cols=317 Identities=19% Similarity=0.271 Sum_probs=245.2
Q ss_pred ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCCCCCCCCCCCCCee
Q 017049 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDY 94 (378)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t~~~~~~~~~~~~ 94 (378)
..|+++|.||||||+++|+|||||+++||+|. +|..| ++.|+|++|+ |++. ..|.|
T Consensus 21 ~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~c~~~----~~~y~~~~Ss---------------T~~~----~~~~~ 76 (395)
T 2qp8_A 21 QGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PHPFL----HRYYQRQLSS---------------TYRD----LRKGV 76 (395)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CCTTC----SCCCCGGGCT---------------TCEE----EEEEE
T ss_pred ceEEEEEEecCCCceEEEEEecCCCceEEECC-CCccc----cCCcCcccCC---------------Ccee----CCceE
Confidence 67999999999999999999999999999998 77655 4789999983 6654 67899
Q ss_pred EeEeCCCCeEEEEEEEEEEEEeecCC-ccccc-cEEEeeeeecCCCCCCCCCCcceEEeeCCCC--------ChHHHHHh
Q 017049 95 EIEYGDGGSSIGALVTDLFPLRFSNG-SVFNV-PLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR--------ISIVSQLR 164 (378)
Q Consensus 95 ~~~y~~g~~~~G~~~~D~v~l~~~~g-~~~~~-~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~--------~s~~~~l~ 164 (378)
++.|++| .+.|.+++|+|+| + +..+. .+.|++........ ......+||||||++. .+++++|+
T Consensus 77 ~i~Yg~G-s~~G~~~~Dtv~i----g~g~~~~~~~~~~~~~~~~~~f-~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~ 150 (395)
T 2qp8_A 77 YVPYTQG-KWEGELGTDLVSI----PHGPNVTVRANIAAITESDKFF-INGSNWEGILGLAYAEIARPDDSLEPFFDSLV 150 (395)
T ss_dssp EEECSSC-EEEEEEEEEEEEC----TTSCSCEEEEEEEEEEEEESCS-CTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred EEEECCc-EEEEEEEeEEEEE----CCCCCceEEEEEEEEEccCccc-ccccCccceEEcCchhhccCCCCCCCHHHHHH
Confidence 9999999 6799999999999 5 33333 35677766542221 1124679999999954 46899999
Q ss_pred hcCCccCeEEEEeCC------------CCceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEeccC-
Q 017049 165 EYGLIRNVIGHCIGQ------------NGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK- 229 (378)
Q Consensus 165 ~~~~i~~~fsl~l~~------------~~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~- 229 (378)
+++.+.++||+||.+ ...|.|+|| |++++.|++.|+|+... .+|.|.|++|+|+++.+...
T Consensus 151 ~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~~~ 226 (395)
T 2qp8_A 151 KQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE----WYYEVIIVRVEINGQDLKMDC 226 (395)
T ss_dssp HHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB----TTBBCCEEEEEETTEECCCCG
T ss_pred HccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCC----ceEEEEEEEEEECCEEcccCc
Confidence 999888899999974 268999999 77889999999999875 89999999999999987542
Q ss_pred ----CCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCC--
Q 017049 230 ----DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRR-- 303 (378)
Q Consensus 230 ----~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~-- 303 (378)
...+||||||++++||.+++++|.+++.+..................|+..+. .....+|+|+|+|++..
T Consensus 227 ~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~----~~~~~~P~i~f~f~g~~~~ 302 (395)
T 2qp8_A 227 KEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGT----TPWNIFPVISLYLMGEVTN 302 (395)
T ss_dssp GGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTC----CCGGGSCCEEEEEECSSTT
T ss_pred cccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCcccccccccccccccc----chHhhCCcEEEEEccCCCC
Confidence 36899999999999999999999999998754110000000001224654321 12236899999998731
Q ss_pred cceEEEeCCCceEEEeCC----ccEEEE-EEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCCCCcccc
Q 017049 304 NSVRLVVPPEAYLVISGR----KNVCLG-ILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLS 373 (378)
Q Consensus 304 ~~~~~~l~~~~~~~~~~~----~~~C~~-~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~c~~~~~ 373 (378)
...++.|++++|+.+..+ ...|+. .+... .+.||||++|||++|+|||++++|||||+++|+...+
T Consensus 303 ~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~----~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~ 373 (395)
T 2qp8_A 303 QSFRITILPQQYLRPVEDVATSQDDCYKFAISQS----STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDE 373 (395)
T ss_dssp EEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE----SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCS
T ss_pred ceEEEEECHHHhEeecccCCCCCceEEEEEecCC----CCcEEEChHHhCCeeEEEECCCCEEEEEeccCCCCCC
Confidence 013799999999987543 347974 23222 3579999999999999999999999999999996433
No 32
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=2.4e-52 Score=407.97 Aligned_cols=317 Identities=20% Similarity=0.284 Sum_probs=249.0
Q ss_pred ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCCCCCCCCCCCCCee
Q 017049 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDY 94 (378)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t~~~~~~~~~~~~ 94 (378)
..|+++|.||||||+++|+|||||+++||+|. +| |. .+..|+|++|+ |++. ..|.|
T Consensus 74 ~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~-~c--c~--~~~~y~~~~Ss---------------T~~~----~~~~~ 129 (455)
T 3lpj_A 74 QGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLSS---------------TYRD----LRKGV 129 (455)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGCT---------------TCEE----EEEEE
T ss_pred CEEEEEEEECCCCeEEEEEEcCCCcceEEecc-cc--cc--cCCcccCCCCC---------------Cccc----CCccE
Confidence 48999999999999999999999999999998 66 43 56899999993 6664 67899
Q ss_pred EeEeCCCCeEEEEEEEEEEEEeecCCcccc-ccEEEeeeeecCCCCCCCCCCcceEEeeCCC--------CChHHHHHhh
Q 017049 95 EIEYGDGGSSIGALVTDLFPLRFSNGSVFN-VPLTFGCGYNQHNPGPLSPPDTAGVLGLGRG--------RISIVSQLRE 165 (378)
Q Consensus 95 ~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~-~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~--------~~s~~~~l~~ 165 (378)
.+.|++| .+.|.+++|+|+|++ +..+ ..+.|+++....... ......+||||||++ ..+|+++|++
T Consensus 130 ~i~Yg~G-s~~G~~~~Dtv~ig~---~~~~~~~~~~~~~~~~~~~~-~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~ 204 (455)
T 3lpj_A 130 YVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITESDKFF-INGSNWEGILGLAYAEIARPDDSLEPFFDSLVK 204 (455)
T ss_dssp EEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCS-CTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHH
T ss_pred EEEeCCe-EEEEEEEEEEEEECC---CcceeeEEEEEEEEccCccc-ccCCCcceEEEeCccccccccCCCCcHHHHHHH
Confidence 9999999 679999999999931 2222 246688877653321 122568999999994 3579999999
Q ss_pred cCCccCeEEEEeCC------------CCceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEeccC--
Q 017049 166 YGLIRNVIGHCIGQ------------NGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK-- 229 (378)
Q Consensus 166 ~~~i~~~fsl~l~~------------~~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~-- 229 (378)
++.|.++||+||.+ ...|.|+|| |++++.|++.|+|+... .+|.|.+++|.|+++.+...
T Consensus 205 q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~w~v~l~~i~v~g~~~~~~~~ 280 (455)
T 3lpj_A 205 QTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE----WYYEVIIVRVEINGQDLKMDCK 280 (455)
T ss_dssp HSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB----TTBBCCEEEEEETTEECCCCGG
T ss_pred ccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCC----ceeEEEEeEEEECCEEcccccc
Confidence 99998899999963 358999999 88899999999999875 89999999999999988653
Q ss_pred ---CCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCC---CCCCCceeeCCccCccccccccccEEEEEcCCC
Q 017049 230 ---DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPD---DKTLPICWRGPFKALGQVTEYFKPLALSFTNRR 303 (378)
Q Consensus 230 ---~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~---~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~ 303 (378)
...++|||||++++||.+++++|++++.+... ...... ......|+...- .....+|+|+|+|++..
T Consensus 281 ~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~---~~~~~~~~~~g~~~~C~~~~~----~~~~~~P~i~f~f~g~~ 353 (455)
T 3lpj_A 281 EYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS---TEKFPDGFWLGEQLVCWQAGT----TPWNIFPVISLYLMGEV 353 (455)
T ss_dssp GGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTT---TSCCCHHHHTTCSCEEESTTC----CCGGGSCCEEEEEECSS
T ss_pred ccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhcc---ccccCcccccCcceecccccC----CchhcCCcEEEEEcCCC
Confidence 56899999999999999999999999998754 111100 111234554321 11235899999998731
Q ss_pred --cceEEEeCCCceEEEeCCc----cEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCCCCccccc
Q 017049 304 --NSVRLVVPPEAYLVISGRK----NVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSL 374 (378)
Q Consensus 304 --~~~~~~l~~~~~~~~~~~~----~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~c~~~~~~ 374 (378)
...++.|++++|+.+..+. ..|+++.... ..+.||||++|||++|+|||++++|||||+++|+...++
T Consensus 354 ~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~---~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~ 427 (455)
T 3lpj_A 354 TNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ---SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEF 427 (455)
T ss_dssp TTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEE---ESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCSS
T ss_pred cCceEEEEECHHHheEeccCCCCCCceEEEEeccC---CCCcEEEChHHhCCeEEEEECCCCEEEEEeccccccccc
Confidence 0126999999999876542 4798632211 235799999999999999999999999999999876543
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-52 Score=396.01 Aligned_cols=300 Identities=20% Similarity=0.288 Sum_probs=241.8
Q ss_pred eeeec---ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCCCCCCC
Q 017049 10 FFPIF---SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCK 86 (378)
Q Consensus 10 ~~pl~---~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t~~~~ 86 (378)
.+||. ..|+++|.||||||+++|+|||||+++||+|. ..|+|++| +..
T Consensus 4 ~~~l~n~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~S----------------s~~-- 54 (340)
T 1wkr_A 4 SVPATNQLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTST----------------SSA-- 54 (340)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTT----------------CEE--
T ss_pred cEeeeccCcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCC----------------ccc--
Confidence 35666 78999999999999999999999999999765 46888777 211
Q ss_pred CCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCC----------
Q 017049 87 HPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR---------- 156 (378)
Q Consensus 87 ~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~---------- 156 (378)
..|.|.+.|++| .+.|.+++|+|+| |+++++++.|||++...+ + ...+||||||++.
T Consensus 55 ---~~~~~~i~Yg~G-s~~G~~~~Dtv~~----g~~~v~~~~fg~~~~~~~---~--~~~~GilGLg~~~~s~~~~~~~~ 121 (340)
T 1wkr_A 55 ---TSDKVSVTYGSG-SFSGTEYTDTVTL----GSLTIPKQSIGVASRDSG---F--DGVDGILGVGPVDLTVGTLSPHT 121 (340)
T ss_dssp ---EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEEES---C--TTCSEEEECSCGGGGTTSEESCT
T ss_pred ---cCceEEEEECCc-EEEEEEEEEEEEE----CCEEEcceEEEEEEccCC---C--cCCCcEEECCccccccccccccc
Confidence 567999999999 5999999999999 888899999999998733 2 3589999999854
Q ss_pred ----ChHHHHHhhcCCc-cCeEEEEeCCC-----CceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCC-
Q 017049 157 ----ISIVSQLREYGLI-RNVIGHCIGQN-----GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSG- 223 (378)
Q Consensus 157 ----~s~~~~l~~~~~i-~~~fsl~l~~~-----~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~- 223 (378)
.+++++|+++|+| +++||+||.+. ..|.|+|| |++++.|++.|+|+........+|.+. ++|.|++
T Consensus 122 ~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~ 200 (340)
T 1wkr_A 122 STSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSS 200 (340)
T ss_dssp TCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTT
T ss_pred cccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCC
Confidence 3579999999999 89999999842 47999999 788999999999998853224899999 9999998
Q ss_pred EEeccCCCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCC
Q 017049 224 KSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRR 303 (378)
Q Consensus 224 ~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~ 303 (378)
+.+.. +..++|||||++++||.+++++|.+++++.... . ..+|..+|... ..+|+|+|+|++
T Consensus 201 ~~l~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~--------~---~g~~~~~C~~~----~~~p~i~f~f~g-- 262 (340)
T 1wkr_A 201 TSILS-STAGIVDTGTTLTLIASDAFAKYKKATGAVADN--------N---TGLLRLTTAQY----ANLQSLFFTIGG-- 262 (340)
T ss_dssp EEEEE-EEEEEECTTBCSEEECHHHHHHHHHHHTCEECT--------T---TSSEEECHHHH----HTCCCEEEEETT--
T ss_pred eEccC-CCeEEEeCCcccccCCHHHHHHHHHhhCCEEcC--------C---CCeEEeecccc----ccCCcEEEEECC--
Confidence 77753 458999999999999999999998888764330 0 01234445432 257999999975
Q ss_pred cceEEEeCCCceEEEeC-------CccEEEEEEcCCC--CCCCCceeEcceeeeeeEEEEeCCCCEEeeecCCCCccc
Q 017049 304 NSVRLVVPPEAYLVISG-------RKNVCLGILNGSE--AEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLL 372 (378)
Q Consensus 304 ~~~~~~l~~~~~~~~~~-------~~~~C~~~~~~~~--~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~c~~~~ 372 (378)
..+.|++++|+++.. +...|+..+...+ .+.+..||||++|||++|+|||++++|||||+++|++++
T Consensus 263 --~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~ 338 (340)
T 1wkr_A 263 --QTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTAT 338 (340)
T ss_dssp --EEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTCC
T ss_pred --EEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCCC
Confidence 899999999997542 1246754432211 112346999999999999999999999999999999754
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=3.1e-42 Score=308.21 Aligned_cols=216 Identities=22% Similarity=0.349 Sum_probs=186.4
Q ss_pred eeec----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCC---CCCCCCCCCCCCCCCcccCCchhccCCCCCCCC
Q 017049 11 FPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT---GCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPP 83 (378)
Q Consensus 11 ~pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~---~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t~ 83 (378)
+||. ..|+++|.||||||+++|+|||||+++||+|. +|. .|. .+..|+|++|+ |+
T Consensus 5 ~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~~C~--~~~~y~~~~Ss---------------T~ 66 (239)
T 1b5f_A 5 VALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSS-KCINSKACR--AHSMYESSDSS---------------TY 66 (239)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSCHHHH--TSCCBCGGGCT---------------TC
T ss_pred eeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcC-CCCCCcccC--CCCCCCCccCC---------------Ce
Confidence 5666 79999999999999999999999999999998 886 565 46789999983 55
Q ss_pred CCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCCCh--HHH
Q 017049 84 RCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRIS--IVS 161 (378)
Q Consensus 84 ~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~~s--~~~ 161 (378)
+. ..+.|.+.|++| .+.|.+++|+|+| |+..++++.||++...... .+.....+||||||++..+ +++
T Consensus 67 ~~----~~~~~~i~Yg~G-s~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~-~f~~~~~~GilGLg~~~~s~p~~~ 136 (239)
T 1b5f_A 67 KE----NGTFGAIIYGTG-SITGFFSQDSVTI----GDLVVKEQDFIEATDEADN-VFLHRLFDGILGLSFQTISVPVWY 136 (239)
T ss_dssp EE----EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHH-HHTTCSCCEEEECSCCSSSCCHHH
T ss_pred ee----CCcEEEEEECCC-cEEEEEEEEEEEE----CCcEEccEEEEEEEeccCc-cccccCcceEEecCccccccHHHH
Confidence 53 567999999999 6899999999999 8888899999999876321 1122567999999998754 788
Q ss_pred HHhhcCCc-cCeEEEEeCCC----CceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEecc--CCCc
Q 017049 162 QLREYGLI-RNVIGHCIGQN----GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL--KDLT 232 (378)
Q Consensus 162 ~l~~~~~i-~~~fsl~l~~~----~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~--~~~~ 232 (378)
+|++++++ +++||+||.+. ..|.|+|| |++++.|++.|+|+... .+|.|.|++|.|+++.+.. ....
T Consensus 137 ~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~~~~ 212 (239)
T 1b5f_A 137 NMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ----YYWQFGIGDVLIGDKSTGFCAPGCQ 212 (239)
T ss_dssp HHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE----TTEEEEECCEEETTEECCTTTTCEE
T ss_pred HHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccC----CeEEEEeeEEEECCEEecccCCCCE
Confidence 99999999 99999999853 58999999 77889999999999875 8999999999999998753 3578
Q ss_pred EEEecCCcceeeChHHHHHHHHHHHH
Q 017049 233 LIFDSGASYAYFTSRVYQEIVSLIMR 258 (378)
Q Consensus 233 ~iiDSGt~~~~lp~~~~~~l~~~i~~ 258 (378)
++|||||++++||.+++++|.+++++
T Consensus 213 aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 213 AFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp EEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred EEEecCcchhhCCHHHHHHHHHHhCC
Confidence 99999999999999999999999864
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=2.5e-38 Score=283.60 Aligned_cols=223 Identities=17% Similarity=0.293 Sum_probs=178.5
Q ss_pred CccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCC------ChHHHHHhhcCCc-cCeEEEEeCCCC----ceeEEeC
Q 017049 120 GSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------ISIVSQLREYGLI-RNVIGHCIGQNG----RGVLFLG 188 (378)
Q Consensus 120 g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~------~s~~~~l~~~~~i-~~~fsl~l~~~~----~G~l~fG 188 (378)
|+++++++.|||++...+. .+.....+||||||++. .+++++|+++|+| +++||+||.+.. .|.|+||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fG 79 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGI-TFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLG 79 (241)
T ss_dssp CCEEEEEEEEEEEEECCSS-TTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEET
T ss_pred CCeEECCeEEEEEEEccCC-ccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEEC
Confidence 4567899999999987432 23335789999999954 4689999999999 999999998642 8999999
Q ss_pred --CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEe-ccCCCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCC
Q 017049 189 --DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSC-GLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPL 265 (378)
Q Consensus 189 --d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~-~~~~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~ 265 (378)
|++++.|++.|+|+... .+|.|.+++|+|+++.+ ...+..++|||||+++++|.+++++|.+++++....
T Consensus 80 g~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~--- 152 (241)
T 1lya_B 80 GTDSKYYKGSLSYLNVTRK----AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLI--- 152 (241)
T ss_dssp SCCGGGEEEEEEEEECSSB----TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEEE---
T ss_pred CcCHHHcCCceEEEECccc----cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCeecc---
Confidence 78889999999999865 89999999999999774 345678999999999999999999999999664320
Q ss_pred CCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcceEEEeCCCceEEEeCC--ccEEEE-EEcCCCC-CCCCcee
Q 017049 266 KLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGR--KNVCLG-ILNGSEA-EVGENNI 341 (378)
Q Consensus 266 ~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~l~~~~~~~~~~~--~~~C~~-~~~~~~~-~~~~~~i 341 (378)
. ..|..+|... ..+|+|+|+|+ +.+++|++++|+++... +..|+. +...... +..+.||
T Consensus 153 -----~----g~~~~~C~~~----~~~p~i~f~f~----g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~i 215 (241)
T 1lya_B 153 -----Q----GEYMIPCEKV----STLPAITLKLG----GKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWI 215 (241)
T ss_dssp -----T----TEEEEEGGGG----GGSCCEEEEET----TEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEE
T ss_pred -----C----CcEEEECCCC----ccCCeEEEEEC----CEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEE
Confidence 0 1233344432 25799999995 48999999999987653 468986 4433211 1346899
Q ss_pred EcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 342 IGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 342 LG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
||++|||++|+|||++++|||||+++
T Consensus 216 lG~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 216 LGDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp ECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred echHHhcceEEEEECCCCEEEEEEcC
Confidence 99999999999999999999999974
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.83 E-value=1.2e-20 Score=142.95 Aligned_cols=84 Identities=27% Similarity=0.485 Sum_probs=73.9
Q ss_pred eeeec----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCC----CCCCCCCCCCCCCCCcccCCchhccCCCCCC
Q 017049 10 FFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT----GCTKPPEKQYKPHKNIVPCSNPRCAALHWPN 81 (378)
Q Consensus 10 ~~pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~----~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~ 81 (378)
.+||. ..|+++|.||||||++.|+|||||+++||+|. +|. .|. .+..|+|++|+
T Consensus 4 ~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~C~--~~~~y~p~~Ss--------------- 65 (97)
T 1lya_A 4 PEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSI-HCKLLDIACW--IHHKYNSDKSS--------------- 65 (97)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCTTCHHHH--TSCCBCGGGCT---------------
T ss_pred eEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEc-CccCcccccC--CCCCCCchhCC---------------
Confidence 46775 88999999999999999999999999999999 886 575 46899999993
Q ss_pred CCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEe
Q 017049 82 PPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLR 116 (378)
Q Consensus 82 t~~~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~ 116 (378)
|++. ..|.|.+.|++| .+.|.+++|+|+|+
T Consensus 66 T~~~----~~~~~~i~Yg~G-s~~G~~~~Dtv~i~ 95 (97)
T 1lya_A 66 TYVK----NGTSFDIHYGSG-SLSGYLSQDTVSVP 95 (97)
T ss_dssp TCEE----EEEEEEEECSSC-EEEEEEEEEEEEES
T ss_pred Ccee----CCCcEEEEECCc-EEEEEEEEEEEEEC
Confidence 6654 678999999999 59999999999993
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.61 E-value=4.3e-16 Score=115.87 Aligned_cols=73 Identities=18% Similarity=0.448 Sum_probs=59.2
Q ss_pred ccccEEEEEcCCCcceEEEeCCCceEEEeCC--ccEEEEEEcCCCC-CCCCceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049 291 YFKPLALSFTNRRNSVRLVVPPEAYLVISGR--KNVCLGILNGSEA-EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 367 (378)
Q Consensus 291 ~~P~l~~~f~~~~~~~~~~l~~~~~~~~~~~--~~~C~~~~~~~~~-~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~ 367 (378)
.+|+|+|+|++ .++.|++++|+.+... ...|++.+...+. +..+.||||+.|||++|+|||.+++|||||+++
T Consensus 12 ~~P~i~f~~gg----~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGfA~~~ 87 (87)
T 1b5f_B 12 SMPNVSFTIGG----KKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 87 (87)
T ss_dssp GCCCEEEEETT----EEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cCCcEEEEECC----EEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEEEEcC
Confidence 57999999964 8999999999987543 3589865543321 234689999999999999999999999999874
No 38
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=93.19 E-value=0.091 Score=42.05 Aligned_cols=28 Identities=11% Similarity=0.118 Sum_probs=25.8
Q ss_pred ceeEcceeeeeeEEEEeCCCCEEeeecC
Q 017049 339 NNIIGEIFMQDKMVIYDNEKQRIGWKPE 366 (378)
Q Consensus 339 ~~iLG~~fl~~~y~vfD~~~~rigfa~~ 366 (378)
..|||..||+++-.+.|+.++++-|.+.
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 5799999999999999999999999764
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=83.46 E-value=0.99 Score=35.72 Aligned_cols=28 Identities=18% Similarity=0.224 Sum_probs=25.7
Q ss_pred ceEEEEEeecCCCcEEEEEEecCCCceeEe
Q 017049 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQ 44 (378)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~ 44 (378)
+.+++++.|+ ++++++++|||++.+.+.
T Consensus 25 ~~~~v~v~In--G~~~~~LvDTGAs~s~is 52 (148)
T 2i1a_A 25 PMLYINIEIN--NYPVKAFVDTGAQTTIMS 52 (148)
T ss_dssp CCCEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred ceEEEEEEEC--CEEEEEEEECCCCccccC
Confidence 7789999998 789999999999999885
No 40
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=83.07 E-value=1.3 Score=32.52 Aligned_cols=28 Identities=29% Similarity=0.357 Sum_probs=24.6
Q ss_pred ceEEEEEeecCCCcEEEEEEecCCCceeEe
Q 017049 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQ 44 (378)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~ 44 (378)
..-.+.|.|| +|.+.+++|||+.++.+.
T Consensus 7 ~rP~vtvkI~--Gq~~eaLLDTGAD~TVl~ 34 (99)
T 2hs1_A 7 KRPLVTIKIG--GQLKEALLDTGADDTIIE 34 (99)
T ss_dssp SCCEEEEEET--TEEEEEEECTTCSSEEES
T ss_pred CCCEEEEEEC--CEEEEEEeccCCCcEEEe
Confidence 4456789999 799999999999999995
No 41
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=82.69 E-value=1.2 Score=32.99 Aligned_cols=28 Identities=14% Similarity=0.177 Sum_probs=24.8
Q ss_pred ceEEEEEeecCCCcEEEEEEecCCCceeEe
Q 017049 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQ 44 (378)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~ 44 (378)
..-.+.|.|| +|.+.+++|||+.++.+.
T Consensus 7 ~RP~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 7 KRPTTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp SCCEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred CCCEEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 4557889999 799999999999999996
No 42
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=80.09 E-value=1.8 Score=31.72 Aligned_cols=28 Identities=21% Similarity=0.177 Sum_probs=24.6
Q ss_pred ceEEEEEeecCCCcEEEEEEecCCCceeEe
Q 017049 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQ 44 (378)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~ 44 (378)
..-++.+.|| +|.+.+++|||..++.+.
T Consensus 7 ~RP~vti~I~--Gq~~e~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 7 KRPVVTAYIE--GQPVEVLLDTGADDSIVA 34 (99)
T ss_dssp SCCEEEEEET--TEEEEEEECTTCSSCEES
T ss_pred cCCeEEEEEC--CEEEEEEEecCCCceEEc
Confidence 4457789999 799999999999999995
No 43
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=79.07 E-value=1.8 Score=34.40 Aligned_cols=29 Identities=17% Similarity=0.238 Sum_probs=26.4
Q ss_pred ceEEEEEeecCCCcEEEEEEecCCCceeEeC
Q 017049 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQC 45 (378)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~ 45 (378)
..+++++.|. ++++++++|||++.+.|.-
T Consensus 23 ~~l~v~~~In--g~~v~~LVDTGAs~s~Is~ 51 (148)
T 3s8i_A 23 TMLYINCKVN--GHPLKAFVDSGAQMTIMSQ 51 (148)
T ss_dssp CCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CEEEEEEEEC--CEEEEEEEeCCCCcEeeCH
Confidence 7889999998 7999999999999999953
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=77.06 E-value=2.4 Score=31.76 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=26.3
Q ss_pred eEEEEEeec---CCCcEEEEEEecCCCceeEeCC
Q 017049 16 YFAVNLTVG---KPPKLFDFDFDTGSDLTWVQCD 46 (378)
Q Consensus 16 ~y~~~i~iG---tP~q~~~v~~DTGS~~~wv~~~ 46 (378)
.-.+.|.|| +|+|.+..++|||..++.+.-.
T Consensus 10 RPlvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~ 43 (116)
T 3liy_A 10 RPVIKAQVDTQTSHPKTIEALLDTGADMTVIPIA 43 (116)
T ss_dssp CCEEEEEEECSSSCCEEEEEEECTTBSSCEEEGG
T ss_pred CCeEEEEEccccCCCeEeEEEeccCCCccEEecc
Confidence 556778888 7799999999999999999643
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=75.53 E-value=3 Score=31.53 Aligned_cols=28 Identities=25% Similarity=0.255 Sum_probs=23.9
Q ss_pred ceEEEEEeecCCCcEEEEEEecCCCceeEeC
Q 017049 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQC 45 (378)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~ 45 (378)
..-.+ |.|| +|.+.+++|||+.++.+.-
T Consensus 13 ~rP~v-ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 13 RPEIL-IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp CCEEE-EEET--TEEEEEEECTTCSSCEEEG
T ss_pred CCCEE-EEEC--CEEEEEEecCCCCcEEEcc
Confidence 44556 9999 7999999999999999963
No 46
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=71.11 E-value=4 Score=32.06 Aligned_cols=27 Identities=11% Similarity=0.195 Sum_probs=25.0
Q ss_pred ceeEcceeeeeeEEEEeCCCCEEeeec
Q 017049 339 NNIIGEIFMQDKMVIYDNEKQRIGWKP 365 (378)
Q Consensus 339 ~~iLG~~fl~~~y~vfD~~~~rigfa~ 365 (378)
..|||..||+++-..+|+.+++|-|..
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~~ 135 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIAE 135 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEETT
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEcc
Confidence 479999999999999999999999974
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=70.65 E-value=4.3 Score=30.47 Aligned_cols=28 Identities=25% Similarity=0.376 Sum_probs=24.2
Q ss_pred EEEEEeecCCCcEEEEEEecCCCceeEeCC
Q 017049 17 FAVNLTVGKPPKLFDFDFDTGSDLTWVQCD 46 (378)
Q Consensus 17 y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~ 46 (378)
-.+.+.|| +|.+.+++|||..++.+.-.
T Consensus 10 P~vti~I~--Gq~~eaLLDTGADdTVi~~~ 37 (114)
T 3sqf_A 10 PSLTLWLD--DKMFTGLINTGADVTIIKLE 37 (114)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEGG
T ss_pred CeEEEEEC--CEEEEEEEccCCCceEEecc
Confidence 45788999 79999999999999999643
No 48
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=69.23 E-value=4.4 Score=30.98 Aligned_cols=32 Identities=16% Similarity=0.118 Sum_probs=24.9
Q ss_pred ecceEEEEEe----------ecCCCcEEEEEEecCCCceeEeCC
Q 017049 13 IFSYFAVNLT----------VGKPPKLFDFDFDTGSDLTWVQCD 46 (378)
Q Consensus 13 l~~~y~~~i~----------iGtP~q~~~v~~DTGS~~~wv~~~ 46 (378)
+...-.+.+. || +|.+..++|||..++.+.-.
T Consensus 7 l~~rP~v~v~~~~~~~~p~~i~--gq~~eaLLDTGAD~TVl~~~ 48 (124)
T 2rsp_A 7 HKDRPLVRVILTNTGSHPVKQR--SVYITALLDSGADITIISEE 48 (124)
T ss_dssp SSSCCEEEEEEEECCSSCCSCS--EEEEEEEECTTCSSCEEETT
T ss_pred hhhCCeEEEEeccCCCCcccCC--CEEEEEEecCCCCcEEEecc
Confidence 3355566666 76 68899999999999999643
No 49
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=65.49 E-value=6 Score=30.60 Aligned_cols=29 Identities=24% Similarity=0.277 Sum_probs=24.6
Q ss_pred ceEEEEEeecCCCcEEEEEEecCCCceeEeC
Q 017049 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQC 45 (378)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~ 45 (378)
..-.+.+.|+ +|.+++++|||.+++.+.-
T Consensus 21 ~RP~v~i~I~--G~~~~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 21 PEPRITLKVG--GQPVTFLVDTGAQHSVLTQ 49 (132)
T ss_dssp CSSEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CCCEEEEEEC--CEEEEEEEeCCCCeEEEcc
Confidence 3456789999 7999999999999999953
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=57.51 E-value=9.3 Score=31.87 Aligned_cols=28 Identities=29% Similarity=0.344 Sum_probs=24.8
Q ss_pred ceEEEEEeecCCCcEEEEEEecCCCceeEe
Q 017049 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQ 44 (378)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~ 44 (378)
..-.+.|.|| +|.+.+++|||..++.+.
T Consensus 7 ~RP~vtv~I~--Gq~~e~LLDTGAD~TVl~ 34 (203)
T 3ka2_A 7 KRPLVTIRIG--GQLKEALLDTGADDTVIE 34 (203)
T ss_dssp SCCEEEEEET--TEEEEEEECTTCSSCEEC
T ss_pred CCCeEEEEEC--CEEEEEEEecCCCceEEe
Confidence 4557889999 799999999999999995
No 51
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=36.97 E-value=42 Score=28.26 Aligned_cols=39 Identities=21% Similarity=0.319 Sum_probs=27.2
Q ss_pred eeeeeec--ceEEEE---EeecCC----CcEEEEEEecCCCceeEeCC
Q 017049 8 FFFFPIF--SYFAVN---LTVGKP----PKLFDFDFDTGSDLTWVQCD 46 (378)
Q Consensus 8 ~~~~pl~--~~y~~~---i~iGtP----~q~~~v~~DTGS~~~wv~~~ 46 (378)
..-+|+. .+|.+. |.||.- .....+++|||++.+++|..
T Consensus 90 l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 90 LSYLNVTRKAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp EEEEECSSBTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred eEEEECccccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 3445665 566554 668752 34578999999999999744
No 52
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=36.94 E-value=27 Score=25.59 Aligned_cols=35 Identities=17% Similarity=0.244 Sum_probs=27.3
Q ss_pred cceEeeeeEEEeCCEEeccCCCcEEEecCCcceeeChHHH
Q 017049 210 KHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVY 249 (378)
Q Consensus 210 ~~w~v~l~~i~v~~~~~~~~~~~~iiDSGt~~~~lp~~~~ 249 (378)
..|+=++-.++|+|+.+ .+++|||+-.+.+.....
T Consensus 4 ~l~~RP~v~v~I~Gq~~-----e~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 4 NLEKRPTTIVLINDTPL-----NVLLDTGADTSVLTTAHY 38 (104)
T ss_dssp CSSSCCEEEEEETTEEE-----EEEECTTCSSCEEEHHHH
T ss_pred eccCCCEEEEEECCEEE-----EEEeccCCCcEEEccccC
Confidence 34555666799999865 689999999999987655
No 53
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=33.19 E-value=38 Score=28.13 Aligned_cols=28 Identities=29% Similarity=0.344 Sum_probs=24.5
Q ss_pred ceEEEEEeecCCCcEEEEEEecCCCceeEe
Q 017049 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQ 44 (378)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~ 44 (378)
..-.+++.|| +|.+..++|||..++.+.
T Consensus 111 ~rP~~~iki~--Gq~~e~LlDTGAD~TVl~ 138 (203)
T 3ka2_A 111 KRPLVTIRIG--GQLKEALLDTGADDTVIE 138 (203)
T ss_dssp SCCEEEEEET--TEEEEEEECTTCSSCEEC
T ss_pred CCCcEEEEEC--CEEEeeeecccCCceeee
Confidence 4557889999 799999999999999995
No 54
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=32.72 E-value=31 Score=25.03 Aligned_cols=31 Identities=13% Similarity=0.163 Sum_probs=24.8
Q ss_pred ceEeeeeEEEeCCEEeccCCCcEEEecCCcceeeCh
Q 017049 211 HYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTS 246 (378)
Q Consensus 211 ~w~v~l~~i~v~~~~~~~~~~~~iiDSGt~~~~lp~ 246 (378)
.|+=++-.++++|+.+ .+++|||+-.+.+..
T Consensus 5 l~~rP~vtvkI~Gq~~-----eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 5 LWKRPLVTIKIGGQLK-----EALLDTGADDTIIEE 35 (99)
T ss_dssp SSSCCEEEEEETTEEE-----EEEECTTCSSEEESC
T ss_pred ccCCCEEEEEECCEEE-----EEEeccCCCcEEEec
Confidence 4555666799999876 689999999888875
No 55
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=32.25 E-value=49 Score=29.48 Aligned_cols=39 Identities=21% Similarity=0.320 Sum_probs=28.2
Q ss_pred eeeeeec---ceEEEE---EeecC---CCcEEEEEEecCCCceeEeCC
Q 017049 8 FFFFPIF---SYFAVN---LTVGK---PPKLFDFDFDTGSDLTWVQCD 46 (378)
Q Consensus 8 ~~~~pl~---~~y~~~---i~iGt---P~q~~~v~~DTGS~~~wv~~~ 46 (378)
..-.|+. +.|.+. |.||. +.+...++||||++.+++|-.
T Consensus 183 l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 183 VAYTPVDNSQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp EEEEECBCTTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred eEEEEccCCCceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 3446664 567666 56775 246789999999999999744
No 56
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=30.22 E-value=57 Score=28.95 Aligned_cols=41 Identities=27% Similarity=0.414 Sum_probs=27.4
Q ss_pred CceeeeCccCCCCCcceEeeeeEEEeCCEEeccCCCcEEEecCCcceeeChHH
Q 017049 196 GVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRV 248 (378)
Q Consensus 196 ~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDSGt~~~~lp~~~ 248 (378)
.+...|+... ..|.+ .|.||.+. ..++||||++.+++|..-
T Consensus 5 ~v~~~~~~~~----~~Y~~---~i~iG~Q~-----~~v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 5 VATNTPTAND----EEYIT---PVTIGGTT-----LNLNFDTGSADLWVFSTE 45 (323)
T ss_dssp EEEEEECGGG----SCEEE---EEEETTEE-----EEEEEETTCCCEEECBTT
T ss_pred ceeeeecCCC----CEEEE---EEEECCEE-----EEEEEeCCCcceEEecCC
Confidence 3344454433 55654 47788444 368999999999999754
No 57
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=28.70 E-value=38 Score=24.58 Aligned_cols=30 Identities=13% Similarity=0.238 Sum_probs=24.1
Q ss_pred cceEeeeeEEEeCCEEeccCCCcEEEecCCcceee
Q 017049 210 KHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYF 244 (378)
Q Consensus 210 ~~w~v~l~~i~v~~~~~~~~~~~~iiDSGt~~~~l 244 (378)
..|+=++-.++++|+.+ .+++|||+-.+.+
T Consensus 4 ~l~~RP~vti~I~Gq~~-----e~LLDTGAD~TVl 33 (99)
T 3ec0_A 4 SLWKRPVVTAYIEGQPV-----EVLLDTGADDSIV 33 (99)
T ss_dssp CSSSCCEEEEEETTEEE-----EEEECTTCSSCEE
T ss_pred ccccCCeEEEEECCEEE-----EEEEecCCCceEE
Confidence 44666677799999877 5899999988877
No 58
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=28.50 E-value=50 Score=25.37 Aligned_cols=27 Identities=26% Similarity=0.391 Sum_probs=22.0
Q ss_pred eeeEEEeCCEEeccCCCcEEEecCCcceeeCh
Q 017049 215 GPAELLYSGKSCGLKDLTLIFDSGASYAYFTS 246 (378)
Q Consensus 215 ~l~~i~v~~~~~~~~~~~~iiDSGt~~~~lp~ 246 (378)
++-.++|+|+.+ .+++|||...+.|+.
T Consensus 23 P~v~i~I~G~~~-----~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 23 PRITLKVGGQPV-----TFLVDTGAQHSVLTQ 49 (132)
T ss_dssp SEEEEEETTEEE-----EEEECTTCSSCEECS
T ss_pred CEEEEEECCEEE-----EEEEeCCCCeEEEcc
Confidence 445588898876 589999999999986
No 59
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=28.09 E-value=60 Score=28.85 Aligned_cols=40 Identities=13% Similarity=0.231 Sum_probs=27.7
Q ss_pred eeeeeeec---ceEEEE---EeecC--CCcEEEEEEecCCCceeEeCC
Q 017049 7 EFFFFPIF---SYFAVN---LTVGK--PPKLFDFDFDTGSDLTWVQCD 46 (378)
Q Consensus 7 ~~~~~pl~---~~y~~~---i~iGt--P~q~~~v~~DTGS~~~wv~~~ 46 (378)
...-+|+. ++|.++ |.||. +.+...+++|||++.+++|-.
T Consensus 178 ~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~~lp~~ 225 (323)
T 1izd_A 178 SITYTDVDNSQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDDS 225 (323)
T ss_dssp EEEEEECBCTTSSCEEEESEEEETTEEECCCEEEEECTTCCSEEECHH
T ss_pred ceEEEECCCCCceEEEEECeEEECCcccCCCceEEEeCCCcceeCCHH
Confidence 34456764 567665 45765 235578999999999999744
No 60
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=27.86 E-value=40 Score=30.14 Aligned_cols=39 Identities=15% Similarity=0.273 Sum_probs=27.0
Q ss_pred eeeeeec--ceEEEE---EeecCC---CcEEEEEEecCCCceeEeCC
Q 017049 8 FFFFPIF--SYFAVN---LTVGKP---PKLFDFDFDTGSDLTWVQCD 46 (378)
Q Consensus 8 ~~~~pl~--~~y~~~---i~iGtP---~q~~~v~~DTGS~~~wv~~~ 46 (378)
..-+|+. ++|.++ |.||.- .....+++|||++.+++|-.
T Consensus 184 l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTs~~~lP~~ 230 (330)
T 1yg9_A 184 FTYVPLVGDDSWKFRLDGVKIGDTTVAPAGTQAIIDTSKAIIVGPKA 230 (330)
T ss_dssp EEEEEBSCTTSCCEECSEEEETTEEEECTTCEEEECTTCSSEEEEHH
T ss_pred eEEEECCCCCEEEEEeCeEEECCEEEcCCCcEEEEecCCccccCCHH
Confidence 3446665 566565 677752 23467999999999999744
No 61
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=27.33 E-value=75 Score=30.19 Aligned_cols=38 Identities=18% Similarity=0.237 Sum_probs=27.2
Q ss_pred eeeeeec--ceEEEE---EeecC-----CCcEEEEEEecCCCceeEeC
Q 017049 8 FFFFPIF--SYFAVN---LTVGK-----PPKLFDFDFDTGSDLTWVQC 45 (378)
Q Consensus 8 ~~~~pl~--~~y~~~---i~iGt-----P~q~~~v~~DTGS~~~wv~~ 45 (378)
..-+|+. ++|.+. |.||. +.....+++|||++++++|-
T Consensus 222 l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~ 269 (478)
T 1qdm_A 222 HTYVPVTQKGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPT 269 (478)
T ss_dssp EEEEEEEEETTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECH
T ss_pred ceEEeccCCCeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCH
Confidence 3445665 677665 56764 23467899999999999974
No 62
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=27.24 E-value=62 Score=28.75 Aligned_cols=31 Identities=23% Similarity=0.361 Sum_probs=23.0
Q ss_pred cceEeeeeEEEeCCEEeccCCCcEEEecCCcceeeChHH
Q 017049 210 KHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRV 248 (378)
Q Consensus 210 ~~w~v~l~~i~v~~~~~~~~~~~~iiDSGt~~~~lp~~~ 248 (378)
..|.++ |.||.+. ..++||||++.+++|..-
T Consensus 14 ~~Y~~~---i~iG~Q~-----~~v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 14 EEYLTP---VTVGKST-----LHLDFDTGSADLWVFSDE 44 (325)
T ss_dssp SCEEEE---EEEBTEE-----EEEEEETTCCCEEEECTT
T ss_pred CEEEEE---EEECCEE-----EEEEEeCCCccceEeeCC
Confidence 556554 6777444 468999999999999754
No 63
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=27.13 E-value=40 Score=25.23 Aligned_cols=31 Identities=13% Similarity=0.206 Sum_probs=25.4
Q ss_pred cceEeeeeEEEeCCEEeccCCCcEEEecCCcceeeCh
Q 017049 210 KHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTS 246 (378)
Q Consensus 210 ~~w~v~l~~i~v~~~~~~~~~~~~iiDSGt~~~~lp~ 246 (378)
..|+=++- ++|+|+.+ .+++|||+-.+.+..
T Consensus 10 ~l~~rP~v-ikI~Gq~~-----eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPI-----KFLLDTGADITVLNR 40 (116)
T ss_dssp SSSCCEEE-EEETTEEE-----EEEECTTCSSCEEEG
T ss_pred cccCCCEE-EEECCEEE-----EEEecCCCCcEEEcc
Confidence 45776777 99999876 689999998888875
No 64
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=25.37 E-value=58 Score=28.99 Aligned_cols=39 Identities=18% Similarity=0.304 Sum_probs=27.5
Q ss_pred eeeeeec---ceEEEE---EeecCC---CcEEEEEEecCCCceeEeCC
Q 017049 8 FFFFPIF---SYFAVN---LTVGKP---PKLFDFDFDTGSDLTWVQCD 46 (378)
Q Consensus 8 ~~~~pl~---~~y~~~---i~iGtP---~q~~~v~~DTGS~~~wv~~~ 46 (378)
..-.|+. ++|.+. |.||.- .....++||||++.+++|-.
T Consensus 182 l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1oew_A 182 ITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPAT 229 (329)
T ss_dssp CEEEECBCTTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHH
T ss_pred eEEEEccCCCceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHH
Confidence 3446664 566555 678752 34678999999999999744
No 65
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=25.22 E-value=56 Score=29.02 Aligned_cols=39 Identities=28% Similarity=0.428 Sum_probs=27.2
Q ss_pred eeeeeec---ceEEEE---EeecCC--CcEEEEEEecCCCceeEeCC
Q 017049 8 FFFFPIF---SYFAVN---LTVGKP--PKLFDFDFDTGSDLTWVQCD 46 (378)
Q Consensus 8 ~~~~pl~---~~y~~~---i~iGtP--~q~~~v~~DTGS~~~wv~~~ 46 (378)
..-+|+. +.|.+. |.||.+ .....++||||++.+++|-.
T Consensus 183 l~~~p~~~~~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 183 LTTVPIDNSRGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp CEEEECBCTTSSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred eEEEEccCCCCEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 3446664 566655 567752 34578999999999999744
No 66
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=25.16 E-value=83 Score=28.81 Aligned_cols=40 Identities=15% Similarity=0.252 Sum_probs=28.5
Q ss_pred eeeeeeec--ceEEEE---EeecCC----CcEEEEEEecCCCceeEeCC
Q 017049 7 EFFFFPIF--SYFAVN---LTVGKP----PKLFDFDFDTGSDLTWVQCD 46 (378)
Q Consensus 7 ~~~~~pl~--~~y~~~---i~iGtP----~q~~~v~~DTGS~~~wv~~~ 46 (378)
...-+|+. ++|.+. |.||.- .....+++|||++++++|..
T Consensus 232 ~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~aiiDTGTs~~~lP~~ 280 (383)
T 2x0b_A 232 NFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTS 280 (383)
T ss_dssp EEEEEEBSSTTSCEEEECEEEESSCCCBSTTCEEEEECTTCSSEEECHH
T ss_pred ceEEEEcCCCceEEEEEeEEEeCCceEEcCCCcEEEEcCCCceEEcCHH
Confidence 34446666 667664 678753 24578999999999999743
No 67
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=25.11 E-value=80 Score=28.44 Aligned_cols=44 Identities=20% Similarity=0.411 Sum_probs=29.8
Q ss_pred CCCceeeeCccCCCCCcceEeeeeEEEeC--CEEeccCCCcEEEecCCcceeeChH
Q 017049 194 SSGVAWTPMLQNSADLKHYILGPAELLYS--GKSCGLKDLTLIFDSGASYAYFTSR 247 (378)
Q Consensus 194 ~g~l~~~p~~~~~~~~~~w~v~l~~i~v~--~~~~~~~~~~~iiDSGt~~~~lp~~ 247 (378)
+|.....|+.... ...|.++ |.|| .+.+ .++||||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~--~~~Y~~~---i~iGtP~q~~-----~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFD--LEEYAIP---VSIGTPGQDF-----YLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETT--TTEEEEE---EEETTTTEEE-----EEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCC--CCEEEEE---EEECCCCcEE-----EEEEcCCCCCeEECCC
Confidence 4556667777642 1556554 6777 3443 6899999999999965
No 68
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=23.43 E-value=96 Score=27.27 Aligned_cols=39 Identities=15% Similarity=0.315 Sum_probs=26.7
Q ss_pred eeeeeec--ceEEEE---EeecCC----CcEEEEEEecCCCceeEeCC
Q 017049 8 FFFFPIF--SYFAVN---LTVGKP----PKLFDFDFDTGSDLTWVQCD 46 (378)
Q Consensus 8 ~~~~pl~--~~y~~~---i~iGtP----~q~~~v~~DTGS~~~wv~~~ 46 (378)
..-+|+. ..|.+. |.||.- +....+++|||++.+++|-.
T Consensus 177 l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~ 224 (320)
T 4aa9_A 177 LHWVPVTLQQYWQFTVDSVTINGVAVACVGGCQAILDTGTSVLFGPSS 224 (320)
T ss_dssp EEEEECSSBTTBEEEECEEEETTEEEESTTCEEEEECTTCSSEEEEHH
T ss_pred eEEEEcccCCceEEEEeEEEECCEEeccCCCcEEEEECCCCcEECCHH
Confidence 3445665 566555 567741 24578999999999999744
No 69
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=23.03 E-value=92 Score=27.53 Aligned_cols=44 Identities=23% Similarity=0.346 Sum_probs=27.3
Q ss_pred CceeeeCccCCCCCcceEeeeeEEEeCCEEeccCCCcEEEecCCcceeeChH
Q 017049 196 GVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSR 247 (378)
Q Consensus 196 ~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDSGt~~~~lp~~ 247 (378)
+....|+.... ...|.+ .|.||.- .....++||||++.+++|..
T Consensus 2 ~~~~~~l~n~~--~~~Y~~---~i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 2 EVASVPLTNYL--DSQYFG---KIYLGTP---PQEFTVLFDTGSSDFWVPSI 45 (323)
T ss_dssp CCEEEEEEEET--TTEEEE---EEEETTT---TEEEEEEEETTCCCEEEEBT
T ss_pred CcceeeeEecc--CCEEEE---EEEECCC---CeEEEEEEeCCccceEEcCC
Confidence 34455665532 145554 3667731 11246899999999999975
No 70
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=22.96 E-value=1e+02 Score=27.31 Aligned_cols=39 Identities=21% Similarity=0.391 Sum_probs=27.3
Q ss_pred eeeeeec--ceEEEE---EeecCC-----CcEEEEEEecCCCceeEeCC
Q 017049 8 FFFFPIF--SYFAVN---LTVGKP-----PKLFDFDFDTGSDLTWVQCD 46 (378)
Q Consensus 8 ~~~~pl~--~~y~~~---i~iGtP-----~q~~~v~~DTGS~~~wv~~~ 46 (378)
..-+|+. ..|.+. |.||.- .....++||||++.+++|-.
T Consensus 180 l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~ 228 (329)
T 1htr_B 180 IYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQ 228 (329)
T ss_dssp EEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGG
T ss_pred eEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHH
Confidence 3445665 566654 567741 34578999999999999855
No 71
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=22.43 E-value=69 Score=28.80 Aligned_cols=39 Identities=23% Similarity=0.397 Sum_probs=26.8
Q ss_pred eeeeeec--ceEEEE---EeecCC----CcEEEEEEecCCCceeEeCC
Q 017049 8 FFFFPIF--SYFAVN---LTVGKP----PKLFDFDFDTGSDLTWVQCD 46 (378)
Q Consensus 8 ~~~~pl~--~~y~~~---i~iGtP----~q~~~v~~DTGS~~~wv~~~ 46 (378)
..-+|+. ++|.+. |.||.- .....++||||++.+++|-.
T Consensus 192 l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTs~~~lP~~ 239 (351)
T 1tzs_A 192 LNWVPVTKQAYWQIALDNIQVGGTVMFCSEGCQAIVDTGTSLITGPSD 239 (351)
T ss_dssp CEEEECSEETTEEEEEEEEEETTEEEECTTCEEEEECTTCSSEEECHH
T ss_pred eEEEecCCCceEEEEeCEEEECCceEEcCCCceEEeccCCcceeCCHH
Confidence 3345665 666654 677741 24468999999999999743
No 72
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=22.41 E-value=84 Score=27.95 Aligned_cols=39 Identities=15% Similarity=0.251 Sum_probs=26.8
Q ss_pred eeeeeec--ceEEEE---EeecCC----CcEEEEEEecCCCceeEeCC
Q 017049 8 FFFFPIF--SYFAVN---LTVGKP----PKLFDFDFDTGSDLTWVQCD 46 (378)
Q Consensus 8 ~~~~pl~--~~y~~~---i~iGtP----~q~~~v~~DTGS~~~wv~~~ 46 (378)
..-+|+. ..|.+. |.||.- +....++||||++.+++|-.
T Consensus 190 l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~ 237 (341)
T 3k1w_A 190 FHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTS 237 (341)
T ss_dssp EEEEECSSTTSCEEEECCEEETTEEEECTTCEEEEECTTCSSEEECHH
T ss_pred eEEEecCCCCEEEEEEeEEEECCEEeecCCCCEEEEECCCChhcCCHH
Confidence 3445665 566664 567742 24578999999999999743
No 73
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=22.21 E-value=1.1e+02 Score=28.82 Aligned_cols=40 Identities=18% Similarity=0.235 Sum_probs=26.6
Q ss_pred eeeeeeec--ceEEEE--EeecCCC-cEEEEEEecCCCceeEeCC
Q 017049 7 EFFFFPIF--SYFAVN--LTVGKPP-KLFDFDFDTGSDLTWVQCD 46 (378)
Q Consensus 7 ~~~~~pl~--~~y~~~--i~iGtP~-q~~~v~~DTGS~~~wv~~~ 46 (378)
...-+|+. ++|.+. |.||... ....+++|||++.+++|..
T Consensus 305 ~l~~~pv~~~~~w~V~l~I~Vgg~~~~~~~aIiDSGTsl~~lP~~ 349 (453)
T 2bju_A 305 PLTYEKLNHDLYWQITLDAHVGNIMLEKANCIVDSGTSAITVPTD 349 (453)
T ss_dssp EEEEEEEEEETTEEEEEEEEETTEEEEEEEEEECTTCCSEEECHH
T ss_pred ceEEEecCCCceEEEEEEEEECcEEeccccEEEcCCCCeEecCHH
Confidence 33446665 666555 5677510 2367899999999999743
No 74
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=21.11 E-value=1.1e+02 Score=26.91 Aligned_cols=38 Identities=21% Similarity=0.349 Sum_probs=26.6
Q ss_pred eeeeeec--ceEEEE---EeecCC----CcEEEEEEecCCCceeEeCC
Q 017049 8 FFFFPIF--SYFAVN---LTVGKP----PKLFDFDFDTGSDLTWVQCD 46 (378)
Q Consensus 8 ~~~~pl~--~~y~~~---i~iGtP----~q~~~v~~DTGS~~~wv~~~ 46 (378)
..-+|+. ..|.+. |.||.- .+ ..++||||++.+++|-.
T Consensus 179 l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~-~~aiiDSGTt~~~lp~~ 225 (324)
T 1am5_A 179 IHWIPVTAEKYWQVALDGITVNGQTAACEG-CQAIVDTGTSKIVAPVS 225 (324)
T ss_dssp CEEEEEEEETTEEEEECEEEETTEECCCCC-EEEEECTTCSSEEECTT
T ss_pred eEEEecCCCcEEEEEEeEEEECCceeeccC-ceEEEecCCccEECCHH
Confidence 3445665 666664 567741 22 78999999999999855
No 75
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=20.58 E-value=1.2e+02 Score=26.90 Aligned_cols=39 Identities=21% Similarity=0.440 Sum_probs=25.9
Q ss_pred eeeeeec--ceEEEE---EeecCC---CcEEEEEEecCCCceeEeCC
Q 017049 8 FFFFPIF--SYFAVN---LTVGKP---PKLFDFDFDTGSDLTWVQCD 46 (378)
Q Consensus 8 ~~~~pl~--~~y~~~---i~iGtP---~q~~~v~~DTGS~~~wv~~~ 46 (378)
..-+|+. .+|.+. |.||.- .....++||||++.+++|-.
T Consensus 183 l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1dpj_A 183 ITWLPVRRKAYWEVKFEGIGLGDEYAELESHGAAIDTGTSLITLPSG 229 (329)
T ss_dssp EEEEECSSBTTBEEEEEEEEETTEEEECSSCEEEECTTCSCEEECHH
T ss_pred eEEEEcCCCceEEEEeeeEEECCeEecCCCccEEeeCCCCcEECCHH
Confidence 3345665 566554 667742 13457999999999999743
Done!